HHsearch alignment for GI: 254781020 and conserved domain: COG0352

Probab=96.73  E-value=0.037  Score=31.11  Aligned_cols=115  Identities=17%  Similarity=0.091  Sum_probs=71.0

Q ss_pred             HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf             99999873997178504786688999999976997999458888651001231023443232443106346889999985
Q gi|254781020|r  175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP  254 (337)
Q Consensus       175 i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~  254 (337)
T Consensus        94 ~~~ar~~~~~~~iI-G~S~-h~~eea~~A~~~g~DYv~~GpifpT~tK~---------~-------~~~~G~~~l~~~~~  155 (211)
T COG0352          94 LAEARELLGPGLII-GLST-HDLEEALEAEELGADYVGLGPIFPTSTKP---------D-------APPLGLEGLREIRE  155 (211)
T ss_pred             HHHHHHHCCCCCEE-EEEC-CCHHHHHHHHHCCCCEEEECCCCCCCCCC---------C-------CCCCCHHHHHHHHH
T ss_conf             58899741999789-8304-99999999876399999988867889998---------8-------77467899999998


Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             22898799729888889999999838885233479999841466899999999999
Q gi|254781020|r  255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK  310 (337)
Q Consensus       255 ~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~  310 (337)
T Consensus       156 ~-~~iP~vAIGGi~-~~nv~~v~~~Ga~gVAvvsai~~a-~d~~~a~~~~~~~~~~  208 (211)
T COG0352         156 L-VNIPVVAIGGIN-LENVPEVLEAGADGVAVVSAITSA-ADPAAAAKALRNALED  208 (211)
T ss_pred             H-CCCCEEEECCCC-HHHHHHHHHHCCCEEEEHHHHHCC-CCHHHHHHHHHHHHHH
T ss_conf             2-799989984889-999999998298769726686607-9889999999999874