HHsearch alignment for GI: 254781020 and conserved domain: COG1902
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion].
Probab=98.43 E-value=1.9e-05 Score=50.38 Aligned_cols=141 Identities=16% Similarity=0.142 Sum_probs=86.3
Q ss_pred HHHHHHHCCCEEEECCCCHH----HHHHHCC---CCC-------HHHHHHHHHHHHHHCCC--CEEEEECCCCC------
Q ss_conf 98776508985762532035----6652068---852-------43079999999987399--71785047866------
Q gi|254781020|r 138 HQAVHVLGADGLFLHLNPLQ----EIIQPNG---NTN-------FADLSSKIALLSSAMDV--PLLLKEVGCGL------ 195 (337)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~-------~~~~~~~i~~l~~~~~~--pii~k~v~~~~------ 195 (337)
T Consensus 155 A~rA~~AGFDgVEIH~AhGYLi~qFlsp~tN~RtD~YGGSlENR~Rf~~EVv~aVr~~vg~~~~vg~Rls~~d~~~~~g~ 234 (363)
T COG1902 155 ARRAKEAGFDGVEIHGAHGYLLSQFLSPLTNKRTDEYGGSLENRARFLLEVVDAVREAVGADFPVGVRLSPDDFFDGGGL 234 (363)
T ss_pred HHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
T ss_conf 99999839998998404444999855875577777668858999889999999999972988669999774546778888
Q ss_pred C----HHHHHHHHHCC-CCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCH
Q ss_conf 8----89999999769-979994588886510012310234432324431063468899999852289879972988888
Q gi|254781020|r 196 S----SMDIELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 (337)
Q Consensus 196 ~----~~~~~~a~~aG-ad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g 270 (337)
T Consensus 235 ~~~e~~~la~~L~~~G~~d~i~vs~~~~~~~~~~~------------~~~~~~-~~~~a~~i~~-~~~~pvi~~G~i~~~ 300 (363)
T COG1902 235 TIEEAVELAKALEEAGLVDYIHVSEGGYERGGTIT------------VSGPGY-QVEFAARIKK-AVRIPVIAVGGINDP 300 (363)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC------------CCCCCH-HHHHHHHHHH-HCCCCEEEECCCCCH
T ss_conf 89999999999985588447996036445788744------------466412-4789999988-607877986897999
Q ss_pred HHHHHHHHHC-CCEEHHHHHHHH
Q ss_conf 9999999838-885233479999
Q gi|254781020|r 271 VDILKSIILG-ASLGGLASPFLK 292 (337)
Q Consensus 271 ~Dv~kAlalG-AdaV~iGr~~l~ 292 (337)
T Consensus 301 ~~Ae~~l~~g~aDlVa~gR~~la 323 (363)
T COG1902 301 EQAEEILASGRADLVAMGRPFLA 323 (363)
T ss_pred HHHHHHHHCCCCCEEEECHHHHC
T ss_conf 99999998299888872636650