HHsearch alignment for GI: 254781020 and conserved domain: KOG1606
>KOG1606 consensus.
Probab=94.55 E-value=0.24 Score=26.30 Aligned_cols=143 Identities=16% Similarity=0.206 Sum_probs=77.4
Q ss_pred HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHC---CCCCCC-----------CHHHHHCCCC
Q ss_conf 98739971785047866889999999769979994588886510012310---234432-----------3244310634
Q gi|254781020|r 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDI-----------GIVFQDWGIP 244 (337)
Q Consensus 179 ~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r---~~~~~~-----------~~~~~~~gi~ 244 (337)
T Consensus 121 KhnFkvPFvC---G~-rdlGEALRRI~EGAAMIRtkGeagTG~v-~EaVkhvr~i~geir~~~~m~~dev~t~Ak~i~a- 194 (296)
T KOG1606 121 KHNFKVPFVC---GC-RDLGEALRRIREGAAMIRTKGEAGTGDV-SEAVKHVRSINGEIRVLKNMDDDEVFTFAKEIAA- 194 (296)
T ss_pred HHCCCCCEEE---CC-CCHHHHHHHHHHCHHHHEECCCCCCCCH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC-
T ss_conf 3067675354---25-6389999987503244020464677749-9999999998899999872887899999998647-
Q ss_pred HHHHHHHHHHHCCCCEE--EECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH------CCCHHHHH-----HHHHHHHHH
Q ss_conf 68899999852289879--972988888999999983888523347999984------14668999-----999999999
Q gi|254781020|r 245 TPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPA------MDSSDAVV-----AAIESLRKE 311 (337)
Q Consensus 245 ~~~al~~~~~~~~~v~I--iadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~------~~G~~gv~-----~~l~~l~~e 311 (337)
T Consensus 195 P~dLv~~t~q~-GrlPVV~FAaGGvaTPADAALmMQLGCdGVFVGSgiFks~dP~k~a~aiVqAvthy~dp~~L~evS~~ 273 (296)
T KOG1606 195 PYDLVKQTKQL-GRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPVKRARAIVQAVTHYDDPAKLAEVSSG 273 (296)
T ss_pred CHHHHHHHHHC-CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 08999999970-87745874256758816799999808984886554236898899999999998705888999987415
Q ss_pred HHHHHHHCCCCCHHHHH
Q ss_conf 99999980898578961
Q gi|254781020|r 312 FIVSMFLLGTKRVQELY 328 (337)
Q Consensus 312 l~~~m~~~G~~~i~el~ 328 (337)
T Consensus 274 Lg~aM~g~~i~~~~~~~ 290 (296)
T KOG1606 274 LGEAMVGISIQSIKEAR 290 (296)
T ss_pred HHHHHHCCCCCCHHHHH
T ss_conf 78775255445024442