HHsearch alignment for GI: 254781020 and conserved domain: KOG2335
>KOG2335 consensus.
Probab=98.98 E-value=5.1e-08 Score=65.60 Aligned_cols=205 Identities=16% Similarity=0.143 Sum_probs=119.4
Q ss_pred EEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHH--HCC-HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHH
Q ss_conf 850126633430002569999999980990660520221--128-66888999998664012322027521236799899
Q gi|254781020|r 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM--FSD-HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 (337)
Q Consensus 60 ~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (337)
T Consensus 22 i~APMvd~S~-------l~fR~L~R~y~~~l~yTpMi~a~~fv~~ek~r~-~~~st~~~D~PLIvQf~~ndp~---~ll~ 90 (358)
T KOG2335 22 IVAPMVDYSE-------LAFRRLVRLYGADLLYTPMIHAKTFVHSEKYRD-SELSTSPEDRPLIVQFGGNDPE---NLLK 90 (358)
T ss_pred CCCCCCCCCH-------HHHHHHHHHHCCCEEECHHHHHHHHHCCCCCHH-HHCCCCCCCCCEEEEECCCCHH---HHHH
T ss_conf 5477244627-------899999999687657224788888741742100-0113687778669997479989---9999
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHCCCC-----CHHHHHHHHHHHHHHCCCCEEEEECC---CCCCHHHHHHHHHCCC
Q ss_conf 998776508985762532035665206885-----24307999999998739971785047---8668899999997699
Q gi|254781020|r 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNT-----NFADLSSKIALLSSAMDVPLLLKEVG---CGLSSMDIELGLKSGI 208 (337)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~l~~~~~~pii~k~v~---~~~~~~~~~~a~~aGa 208 (337)
T Consensus 91 Aa~lv~~y~-D~idlNcGCPq~~a~~g~yGa~L~~~~eLv~e~V~~v~~~l~~pVs~KIRI~~d~~kTvd~ak~~e~aG~ 169 (358)
T KOG2335 91 AARLVQPYC-DGIDLNCGCPQKVAKRGGYGAFLMDNPELVGEMVSAVRANLNVPVSVKIRIFVDLEKTVDYAKMLEDAGV 169 (358)
T ss_pred HHHHHHHHC-CCCCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCC
T ss_conf 999865334-7204158998788843772600023889999999999852599869999855767878999999986798
Q ss_pred CEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH-HCCCEEHHH
Q ss_conf 7999458888651001231023443232443106346889999985228987997298888899999998-388852334
Q gi|254781020|r 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII-LGASLGGLA 287 (337)
Q Consensus 209 d~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAla-lGAdaV~iG 287 (337)
T Consensus 170 ~~ltVHGRt----------r~~kg~------~~~pad~~~i~~v~~~~~~ipviaNGnI~~~~d~~~~~~~tG~dGVM~a 233 (358)
T KOG2335 170 SLLTVHGRT----------REQKGL------KTGPADWEAIKAVRENVPDIPVIANGNILSLEDVERCLKYTGADGVMSA 233 (358)
T ss_pred CEEEEECCC----------HHHCCC------CCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 689993655----------776288------8887677999999974767708950885768999999997587468860
Q ss_pred HHHHH
Q ss_conf 79999
Q gi|254781020|r 288 SPFLK 292 (337)
Q Consensus 288 r~~l~ 292 (337)
T Consensus 234 rglL~ 238 (358)
T KOG2335 234 RGLLY 238 (358)
T ss_pred CHHHC
T ss_conf 00003