HHsearch alignment for GI: 254781020 and conserved domain: PRK00208
>PRK00208 thiG thiazole synthase; Reviewed.
Probab=98.79 E-value=6.9e-07 Score=58.91 Aligned_cols=204 Identities=17% Similarity=0.148 Sum_probs=108.4
Q ss_pred EEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHH-HCCHHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 998989625686850126633430002569999999980990660520221-1286688899999866401232202752
Q gi|254781020|r 48 VEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM-FSDHNAIKSFELRQYAPHTVLISNLGAV 126 (337)
Q Consensus 48 t~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T Consensus 2 l~I~~~~f~SRLilGT-----gky~s~--~~~~~ai~aSg~eivTVAlRR~~~~~~~~~~~l~~i-~~~~~~lLPNTAG- 72 (256)
T PRK00208 2 LTIAGKTFSSRLLLGT-----GKYPSP--EVMQEAIEASGAEIVTVALRRVNLGDPGGDNLLDLL-DPLGVTLLPNTAG- 72 (256)
T ss_pred CEECCEEEECCEEEEC-----CCCCCH--HHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHH-CCCCCEECCCCCC-
T ss_conf 1899999774347864-----899999--999999999689779999864247789850588874-3158567666403-
Q ss_pred CCCCCCCHHHH----HHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
Q ss_conf 12367998999----98776508985762532035665206885243079999999987399717850478668899999
Q gi|254781020|r 127 QLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 (337)
Q Consensus 127 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~ 202 (337)
T Consensus 73 ----c~ta~EAVr~A~laRE~~~tnwIKLEVi~D~-------~~LlPD~~etl~Aae~Lv~eGF~Vl-pY~~~D~v~akr 140 (256)
T PRK00208 73 ----CRTAEEAVRTARLAREALGTDWIKLEVIGDD-------KTLLPDPIETLKAAEILVKEGFVVL-PYCTDDPVLAKR 140 (256)
T ss_pred ----CCCHHHHHHHHHHHHHHHCCCEEEEEEECCC-------CCCCCCHHHHHHHHHHHHHCCCEEE-EECCCCHHHHHH
T ss_conf ----2679999999999999848986999981797-------6779886899999999998899897-867889899999
Q ss_pred HHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCC
Q ss_conf 99769979994588886510012310234432324431063468899999852289879972988888999999983888
Q gi|254781020|r 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 (337)
Q Consensus 203 a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAd 282 (337)
T Consensus 141 Le~~Gc~avMPlgs-------------------PIGSg~Gl~n~~~l~~i~e~~-~vPvIVDAGiG~pS~Aa~AMElG~D 200 (256)
T PRK00208 141 LEEAGCAAVMPLGA-------------------PIGSGLGLLNPYNLRIIIEQA-DVPVIVDAGIGTPSDAAQAMELGAD 200 (256)
T ss_pred HHHCCCEEEEECCC-------------------CCCCCCCCCCHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCC
T ss_conf 99749534520456-------------------434798879999999999867-9988985788976678999862554
Q ss_pred EEHHHHHHHH
Q ss_conf 5233479999
Q gi|254781020|r 283 LGGLASPFLK 292 (337)
Q Consensus 283 aV~iGr~~l~ 292 (337)
T Consensus 201 aVL~NTAIA~ 210 (256)
T PRK00208 201 AVLLNTAIAV 210 (256)
T ss_pred EEEHHHHHHC
T ss_conf 3235568772