HHsearch alignment for GI: 254781020 and conserved domain: PRK00278
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed.
Probab=98.27 E-value=9.1e-05 Score=46.44 Aligned_cols=126 Identities=16% Similarity=0.212 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 99899998776508985762532035665206885243079999999987399717850478668899999997699799
Q gi|254781020|r 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 (337)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i 211 (337)
T Consensus 121 id~~QI~ea~-~~GADaiLLI~~~L~-----------~~~l~~l~~~a~~lgl~~LvE----vh~~~El~~a~~~~a~iI 184 (261)
T PRK00278 121 IDPYQIYEAR-AAGADAILLIVAALD-----------DEQLKELLDLAHELGLDVLVE----VHDEEELERALKLGAPLI 184 (261)
T ss_pred CCHHHHHHHH-HCCCCCHHHHHHHCC-----------HHHHHHHHHHHHHHCCEEEEE----ECCHHHHHHHHHCCCCEE
T ss_conf 7699999999-818985789887558-----------999999999999829907977----689999999984799889
Q ss_pred EECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHH
Q ss_conf 94588886510012310234432324431063468899999852289879972988888999999983888523347999
Q gi|254781020|r 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 (337)
Q Consensus 212 ~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l 291 (337)
T Consensus 185 GINnRnL~t~~------------------vd~~~~~~L~~--~ip~~~~~VsESGI~~~~d~~~l~~~G~davLIGeslm 244 (261)
T PRK00278 185 GINNRNLKTFE------------------VDLDTTERLAP--LIPKDRLLVSESGIFTPEDLKRLAKAGADAFLVGESLM 244 (261)
T ss_pred EEECCCCHHCE------------------ECHHHHHHHHH--HCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHH
T ss_conf 87467711200------------------37899999996--48999889979999999999999977999999897876
Q ss_pred HH
Q ss_conf 98
Q gi|254781020|r 292 KP 293 (337)
Q Consensus 292 ~~ 293 (337)
T Consensus 245 ~~ 246 (261)
T PRK00278 245 RA 246 (261)
T ss_pred CC
T ss_conf 79