HHsearch alignment for GI: 254781020 and conserved domain: PRK03220

>PRK03220 consensus.
Probab=97.92  E-value=0.00013  Score=45.50  Aligned_cols=75  Identities=21%  Similarity=0.109  Sum_probs=50.3

Q ss_pred             HHHHHHHHHCCCCEEEECC--CCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
Q ss_conf             8999999976997999458--88865100123102344323244310634688999998522898799729888889999
Q gi|254781020|r  197 SMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL  274 (337)
Q Consensus       197 ~~~~~~a~~aGad~i~v~~--~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~  274 (337)
T Consensus       162 ~~~i~~~~~~g~geil~tdI~rDGt------------------~~G~---d~~l~~~i~~~-~~~piIasGGv~s~~di~  219 (257)
T PRK03220        162 VEWAARGAELGVGEILLNSMDADGT------------------KAGF---DLEMLRAVRAA-VTVPVIASGGAGAVEHFA  219 (257)
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCCC------------------CCCC---CHHHHHHHHHH-CCCCEEEECCCCCHHHHH
T ss_conf             9999998626988899998868660------------------2378---96999999974-899989987899999999


Q ss_pred             HHHHHCCCEEHHHHHHHHH
Q ss_conf             9998388852334799998
Q gi|254781020|r  275 KSIILGASLGGLASPFLKP  293 (337)
Q Consensus       275 kAlalGAdaV~iGr~~l~~  293 (337)
T Consensus       220 ~l~~~g~~gv~~g~a~~~~  238 (257)
T PRK03220        220 PAVAAGADAVLAASVFHFG  238 (257)
T ss_pred             HHHHCCCCEEEEHHHHHCC
T ss_conf             9997899799874687889