HHsearch alignment for GI: 254781020 and conserved domain: PRK03220
>PRK03220 consensus.
Probab=97.92 E-value=0.00013 Score=45.50 Aligned_cols=75 Identities=21% Similarity=0.109 Sum_probs=50.3
Q ss_pred HHHHHHHHHCCCCEEEECC--CCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
Q ss_conf 8999999976997999458--88865100123102344323244310634688999998522898799729888889999
Q gi|254781020|r 197 SMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 (337)
Q Consensus 197 ~~~~~~a~~aGad~i~v~~--~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~ 274 (337)
T Consensus 162 ~~~i~~~~~~g~geil~tdI~rDGt------------------~~G~---d~~l~~~i~~~-~~~piIasGGv~s~~di~ 219 (257)
T PRK03220 162 VEWAARGAELGVGEILLNSMDADGT------------------KAGF---DLEMLRAVRAA-VTVPVIASGGAGAVEHFA 219 (257)
T ss_pred HHHHHHHHHCCCCEEEEEEECCCCC------------------CCCC---CHHHHHHHHHH-CCCCEEEECCCCCHHHHH
T ss_conf 9999998626988899998868660------------------2378---96999999974-899989987899999999
Q ss_pred HHHHHCCCEEHHHHHHHHH
Q ss_conf 9998388852334799998
Q gi|254781020|r 275 KSIILGASLGGLASPFLKP 293 (337)
Q Consensus 275 kAlalGAdaV~iGr~~l~~ 293 (337)
T Consensus 220 ~l~~~g~~gv~~g~a~~~~ 238 (257)
T PRK03220 220 PAVAAGADAVLAASVFHFG 238 (257)
T ss_pred HHHHCCCCEEEEHHHHHCC
T ss_conf 9997899799874687889