HHsearch alignment for GI: 254781020 and conserved domain: PRK05283
>PRK05283 deoxyribose-phosphate aldolase; Provisional.
Probab=97.61 E-value=0.0037 Score=36.94 Aligned_cols=129 Identities=19% Similarity=0.154 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE---CCCCCCHHHH----HHHHHC
Q ss_conf 899998776508985762532035665206885243079999999987399717850---4786688999----999976
Q gi|254781020|r 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGLSSMDI----ELGLKS 206 (337)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~---v~~~~~~~~~----~~a~~a 206 (337)
T Consensus 87 ~~E~~~Ai~-~GAdEIDmVin~~~~---~~--g~~~~v~~~i~~v~~a~~~~~~LKVIlET~~L~~~e~I~~As~~a~~a 160 (258)
T PRK05283 87 LAETRAAIA-YGADEVDVVFPYRAL---MA--GNEQVGFELVKACKEACAANVLLKVIIETGELKDEALIRKASEIAIKA 160 (258)
T ss_pred HHHHHHHHH-CCCCEEEEEEEHHHH---HC--CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999999998-799566544508988---57--887999999999999808984389997403478589999999999996
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH-----CC
Q ss_conf 9979994588886510012310234432324431063468899999852289879972988888999999983-----88
Q gi|254781020|r 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL-----GA 281 (337)
Q Consensus 207 Gad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlal-----GA 281 (337)
T Consensus 161 GADFVKTSTGk~~~gAT~e~v~---------------~M~~aI~~-~~~G~~vGvKasGGIrt~~dA~~yl~L~~~~lG~ 224 (258)
T PRK05283 161 GADFIKTSTGKVPVNATLEAAR---------------IMLEVIRD-MGVGKTVGFKPAGGVRTAEDAAQYLALADEILGA 224 (258)
T ss_pred CCCEEECCCCCCCCCCCHHHHH---------------HHHHHHHH-HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCH
T ss_conf 9798888999899997999999---------------99999998-6458865676258868999999999999997272
Q ss_pred CEE
Q ss_conf 852
Q gi|254781020|r 282 SLG 284 (337)
Q Consensus 282 daV 284 (337)
T Consensus 225 ~w~ 227 (258)
T PRK05283 225 DWA 227 (258)
T ss_pred HHC
T ss_conf 104