HHsearch alignment for GI: 254781020 and conserved domain: PRK06106

Probab=90.26  E-value=1.1  Score=22.31  Aligned_cols=89  Identities=15%  Similarity=0.014  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHCCCCE-EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHH
Q ss_conf             07999999998739971-78504786688999999976997999458888651001231023443232443106346889
Q gi|254781020|r  170 DLSSKIALLSSAMDVPL-LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS  248 (337)
Q Consensus       170 ~~~~~i~~l~~~~~~pi-i~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~a  248 (337)
T Consensus       177 ~i~~av~~~r~~~~~~~kIeVE---v~sl~q~~~al~~g~d~ImLDNmsp----------------------------~~  225 (281)
T PRK06106        177 GVREAIRRARAGVGHLVKIEVE---VDTLEQLEEALELGVDAVLLDNMSP----------------------------DT  225 (281)
T ss_pred             CHHHHHHHHHHHCCCCCEEEEE---ECCHHHHHHHHHCCCCEEEECCCCH----------------------------HH
T ss_conf             8999999999757997249999---6999999999727998999879999----------------------------99


Q ss_pred             HHHH-HHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHH
Q ss_conf             9999-85228987997298888899999998388852334799
Q gi|254781020|r  249 LEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF  290 (337)
Q Consensus       249 l~~~-~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~  290 (337)
T Consensus       226 ~~~av~~~~~~~~~EaSGgI-~~~ni~~yA~tGvD~IS~g~lt  267 (281)
T PRK06106        226 LREAVAIVAGRAITEASGRI-TPETAPAIAASGVDLISVGWLT  267 (281)
T ss_pred             HHHHHHHHCCCEEEEEECCC-CHHHHHHHHHCCCCEEECCHHH
T ss_conf             99999985684689997899-9999999997399999838432