HHsearch alignment for GI: 254781020 and conserved domain: PRK07565
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed.
Probab=100.00 E-value=5.3e-31 Score=200.89 Aligned_cols=266 Identities=17% Similarity=0.095 Sum_probs=175.4
Q ss_pred CCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEE-CCCC---------H-----------------
Q ss_conf 746299898962568685012663343000256999999998099066-0520---------2-----------------
Q gi|254781020|r 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQ---------R----------------- 96 (337)
Q Consensus 44 vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~-~g~~---------~----------------- 96 (337)
T Consensus 1 mDLst~~~Gl~lkNPii~aSg--~~~~~-----~~~~~~~~~~G~GavV~Ksi~~e~i~~~~~~~~~~~~~~~~~~~~~~ 73 (333)
T PRK07565 1 MDLSTTYLGLSLRNPLVASAS--PLTES-----LDNVKRLEDAGAGAVVLKSLFEEQIRHEAAELARHLTQGTESYAEAL 73 (333)
T ss_pred CCCCEEECCEECCCCCEECCC--CCCCC-----HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 966388899966998886660--57999-----99999999859619996877610145777777888888986753334
Q ss_pred -----HHHCCHHHHHHHHHHHH---CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCH
Q ss_conf -----21128668889999986---6401232202752123679989999877650898576253203566520688524
Q gi|254781020|r 97 -----VMFSDHNAIKSFELRQY---APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 (337)
Q Consensus 97 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (337)
T Consensus 74 g~~n~~g~~n~g~e~~l~~i~~~k~~~~~pvIaSi~g~---s~ee~~~~a~~~e~~gadaiElNis~~~~~~~~~~~~~~ 150 (333)
T PRK07565 74 DYFPEPAYFRGGPEEYLELIRRAKEAVDIPVIASLNGS---SAGGWVDYARQIEEAGADALELNIYYLPTDPDISGAEVE 150 (333)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC---CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
T ss_conf 53142345686899999999987750598459874779---989999999999764998899976677988654446507
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCH-HHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHH
Q ss_conf 30799999999873997178504786688-99999997699799945888865100123102344323244310634688
Q gi|254781020|r 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS-MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 (337)
Q Consensus 169 ~~~~~~i~~l~~~~~~pii~k~v~~~~~~-~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~ 247 (337)
T Consensus 151 ~~~~~iv~~V~~~~~~Pv~vKLsPn~tdi~~iA~aa~~~Gadgv~~iNT~~~~~Id~e~~~~~~~~~---lSgp~~~~~- 226 (333)
T PRK07565 151 QRYLDILRAVKSAVSIPVAVKLSPYFSNLANMAKRLDAAGADGLVLFNRFYQPDIDLETLEVVPGLV---LSTPAELRL- 226 (333)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCC---CCCCCCCCH-
T ss_conf 8899999999864688568735998210999999999749988998436665633155443736866---677431207-
Q ss_pred HHHHHHHH--CCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999852--2898799729888889999999838885233479999841466899999999999999999980898578
Q gi|254781020|r 248 SLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 (337)
Q Consensus 248 al~~~~~~--~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~ 325 (337)
T Consensus 227 alr~v~~v~~~~~ipIiG~GGI~sg~DaiE~ilAGAsaVQv~Ta~~~---~G~----~v~~~i~~eL~~~m~~~G~~si~ 299 (333)
T PRK07565 227 PLRWIAILSGRVGADLAATTGVHDAEDVIKMLLAGADVVMIASALLR---HGP----DYIGTILAGLEDWMERHGYESLS 299 (333)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHEEEHHHHH---HCC----HHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 88999999604698988888959899999999809886336223665---372----79999999999999983999899
Q ss_pred HHHCC
Q ss_conf 96149
Q gi|254781020|r 326 ELYLN 330 (337)
Q Consensus 326 el~~~ 330 (337)
T Consensus 300 e~~G~ 304 (333)
T PRK07565 300 QFRGS 304 (333)
T ss_pred HHCCC
T ss_conf 96172