HHsearch alignment for GI: 254781020 and conserved domain: PRK08227

Probab=96.98  E-value=0.023  Score=32.31  Aligned_cols=130  Identities=12%  Similarity=0.049  Sum_probs=75.1

Q ss_pred             HHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE---CCCCCCHH----HHHHHHHCCCCEEEECC
Q ss_conf             508985762532035665206885243079999999987399717850---47866889----99999976997999458
Q gi|254781020|r  143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGLSSM----DIELGLKSGIRYFDIAG  215 (337)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~---v~~~~~~~----~~~~a~~aGad~i~v~~  215 (337)
T Consensus       132 rlGAdAVsv~v~iGs~~-----E~~~l~~lg~v~~e~~~~GmPlla~~~~g~~~~~d~~~va~aaRia~ELGADiVKt~y  206 (291)
T PRK08227        132 RLNVCAVAAQVFIGSEY-----ETQSIKNIIQLVDAGLRYGMPTMAVTAVGKDMVRDARYFSLATRIAAEMGAQIIKTYY  206 (291)
T ss_pred             HCCCCEEEEEEECCCCH-----HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC
T ss_conf             67997899986359932-----8999999999999999829987998346877777789999999999997899885069


Q ss_pred             CCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHH-----HHHHHHHHCCCEEHHHHHH
Q ss_conf             88865100123102344323244310634688999998522898799729888889-----9999998388852334799
Q gi|254781020|r  216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV-----DILKSIILGASLGGLASPF  290 (337)
Q Consensus       216 ~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~-----Dv~kAlalGAdaV~iGr~~  290 (337)
T Consensus       207 t~-----------------------------e~f~~Vv~-a~pvPVliaGG~k~~d~e~L~~v~~a~~aGa~Gv~~GRNV  256 (291)
T PRK08227        207 VE-----------------------------KGFERITA-GCPVPIVIAGGKKLPERDALEMCYQAIDQGASGVDMGRNI  256 (291)
T ss_pred             CH-----------------------------HHHHHHHH-CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf             73-----------------------------45999996-4899789967998986999999999997699368724002


Q ss_pred             HHHHCCCHHHHHHHHHHHH
Q ss_conf             9984146689999999999
Q gi|254781020|r  291 LKPAMDSSDAVVAAIESLR  309 (337)
Q Consensus       291 l~~~~~G~~gv~~~l~~l~  309 (337)
T Consensus       257 fQ~--~~P~~~~~Al~~iV  273 (291)
T PRK08227        257 FQS--DAPVAMIKAVHAVV  273 (291)
T ss_pred             HCC--CCHHHHHHHHHHHH
T ss_conf             358--99899999999986