HHsearch alignment for GI: 254781020 and conserved domain: PRK08318
>PRK08318 dihydropyrimidine dehydrogenase; Validated.
Probab=100.00 E-value=2.5e-31 Score=202.84 Aligned_cols=272 Identities=13% Similarity=0.089 Sum_probs=180.7
Q ss_pred CCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEE-CCCCHH---------------------HHCC
Q ss_conf 746299898962568685012663343000256999999998099066-052022---------------------1128
Q gi|254781020|r 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQRV---------------------MFSD 101 (337)
Q Consensus 44 vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~-~g~~~~---------------------~~~~ 101 (337)
T Consensus 2 ~DLst~~~Gl~lkNP~~lASgp-~t~~------~~~i~~~~~aG~GaVV~KTl~~~~~~~~~pr~~~~~~~~~~~~G~~N 74 (413)
T PRK08318 2 ADLSITFCGIKSPNPFWLASAP-PTNK------YYNVARAFEAGWGGVVWKTLGPFIVNVSSPRFDALVKEDRRFIGFNN 74 (413)
T ss_pred CCCEEEECCEECCCCCEECCCC-CCCC------HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 8622888999818976789867-8899------99999998769539990507876778899982573577624236237
Q ss_pred ------HHHHHHH----HHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHH-HCCC---CC
Q ss_conf ------6688899----99986640123220275212367998999987765089857625320356652-0688---52
Q gi|254781020|r 102 ------HNAIKSF----ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ-PNGN---TN 167 (337)
Q Consensus 102 ------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 167 (337)
T Consensus 75 ~elisd~~le~~L~~i~~~k~~~P~~~vIaSI~g~~--~~e~w~~la~~~e~~GaDalELNiSCPn~~~~~~~G~~~gq~ 152 (413)
T PRK08318 75 IELITDRPLEVNLREIRRVKRDYPDRALIASIMVEC--NEEEWKEIAPLVEETGADGIELNFGCPHGMSERGMGSAVGQV 152 (413)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCC
T ss_conf 421344589999999999886078970899994587--889999999986651887799955567766666555110579
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCH-HHHHHHHHCCCCEEEECCCCCC-CCCCHHHHCCC---CC-CCCHHHHHC
Q ss_conf 430799999999873997178504786688-9999999769979994588886-51001231023---44-323244310
Q gi|254781020|r 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSS-MDIELGLKSGIRYFDIAGRGGT-SWSRIESHRDL---ES-DIGIVFQDW 241 (337)
Q Consensus 168 ~~~~~~~i~~l~~~~~~pii~k~v~~~~~~-~~~~~a~~aGad~i~v~~~gG~-~~~~~~~~r~~---~~-~~~~~~~~~ 241 (337)
T Consensus 153 pe~v~~i~~~Vk~~~~iPV~vKLsPnvtdi~~iA~aa~~aGADgv~liNTi~~~~~iDid~~~~~p~i~~~~~~GGlSG~ 232 (413)
T PRK08318 153 PELVEMVTRWVKRGSRLPVIAKLTPNITDIREPARAAKRGGADAVSLINTINSITGVDLDRMIPMPIVNGKSSHGGYCGP 232 (413)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCH
T ss_conf 99999999998850688569982899752899999999769988999814786553202235530210677776766645
Q ss_pred CCCHHHHHHHHHHHC-----CCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 634688999998522-----898799729888889999999838885233479999841466899999999999999999
Q gi|254781020|r 242 GIPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 (337)
Q Consensus 242 gi~~~~al~~~~~~~-----~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el~~~m 316 (337)
T Consensus 233 aikPi-ALr~V~~i~~~~~~~~ipIiG~GGI~s~~Da~e~ilaGAsaVQv~Ta~~~---~G~----~ii~~i~~gL~~~m 304 (413)
T PRK08318 233 AVKPI-ALNMVAEIARDPETRGLPISGIGGIETWRDAAEFILLGAGTVQVCTAAMQ---YGF----RIVEDMISGLSHYM 304 (413)
T ss_pred HHHHH-HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH---CCC----HHHHHHHHHHHHHH
T ss_conf 67699-99999999863467883779756859899999999827892167510143---384----48999999999999
Q ss_pred HHCCCCCHHHHHCCCC
Q ss_conf 9808985789614960
Q gi|254781020|r 317 FLLGTKRVQELYLNTA 332 (337)
Q Consensus 317 ~~~G~~~i~el~~~~~ 332 (337)
T Consensus 305 ~~~G~~si~d~~G~a~ 320 (413)
T PRK08318 305 DEKGFASLEDMVGLAV 320 (413)
T ss_pred HHCCCCCHHHHHCCCC
T ss_conf 9809974888725265