HHsearch alignment for GI: 254781020 and conserved domain: PRK08782
>PRK08782 consensus.
Probab=97.67 E-value=0.0035 Score=37.07 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=67.5
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC--
Q ss_conf 877650898576253203566520688524307999999998739971785047866889999999769979994588--
Q gi|254781020|r 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-- 216 (337)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~-- 216 (337)
T Consensus 36 eal~~gGi~~iEiTlrt~-------------~a~~~i~~l~~~~p--~~~vGaGTV~~~e~~~~a~~aGA~FiVSP~~~~ 100 (219)
T PRK08782 36 DALLEGGLPAIELTLRTP-------------VAIEALAMLKRELP--NIVIGAGTVLSERQLRQSVDAGADFLVTPGTPA 100 (219)
T ss_pred HHHHHCCCCEEEEECCCC-------------HHHHHHHHHHHHCC--CCEEEEEEECCHHHHHHHHHCCCCEEECCCCCH
T ss_conf 999987998799967993-------------39999999998689--947999970589999999984998998789979
Q ss_pred ---------------CCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCC
Q ss_conf ---------------88651001231023443232443106346889999985228987997298888899999998388
Q gi|254781020|r 217 ---------------GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 (337)
Q Consensus 217 ---------------gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGA 281 (337)
T Consensus 101 ~v~~~a~~~~i~~iPGv~TpSEi~~A~~~G~~~vKlFPA~~~Gg~~~lkal~~pfp~~~f~pTGGV~-~~N~~~yl~~~~ 179 (219)
T PRK08782 101 PLARLLADAPIPAVPGAATPTELLTLMGLGFRVCKLFPATAVGGLQMLKGLAGPLSELKLCPTGGIS-ETNAAEFLSQPN 179 (219)
T ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEECCCHHCCCHHHHHHHHCCCCCCEEEECCCCC-HHHHHHHHHCCC
T ss_conf 9999999819976478599999999998799989977732208499999984769998187679989-878999980799
Q ss_pred CEEHHHHHHH
Q ss_conf 8523347999
Q gi|254781020|r 282 SLGGLASPFL 291 (337)
Q Consensus 282 daV~iGr~~l 291 (337)
T Consensus 180 v~~vgGS~l~ 189 (219)
T PRK08782 180 VLCIGGSWMV 189 (219)
T ss_pred EEEEECHHHC
T ss_conf 3999882538