HHsearch alignment for GI: 254781020 and conserved domain: PRK10415
>PRK10415 tRNA-dihydrouridine synthase B; Provisional.
Probab=96.55 E-value=0.049 Score=30.35 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH-CCCCEEE
Q ss_conf 899998776508985762532035665206885243079999999987399717850478668899999997-6997999
Q gi|254781020|r 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK-SGIRYFD 212 (337)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~-aGad~i~ 212 (337)
T Consensus 151 ~~~~~~~~e~aG~~~itvHgRT~~q~y~g------~adw~~i~~vk~~~~iPvi~--NGDI~~~~da~~~l~~tg~dgvM 222 (321)
T PRK10415 151 CEEIAQLAEDCGIQALTIHGRTRACLFNG------EAEYDSIRAVKQKVSIPVIA--NGDITDPLKARAVLDYTGADALM 222 (321)
T ss_pred HHHHHHHHHHCCCCEEEEEHHHHHHHHCC------CCCHHHHHHHHHCCCCCEEE--CCCCCCHHHHHHHHHHHCCCEEE
T ss_conf 99999999856988999972213443169------98779999998547997896--58919999999999862999999
Q ss_pred ECC-CCCCCC
Q ss_conf 458-888651
Q gi|254781020|r 213 IAG-RGGTSW 221 (337)
Q Consensus 213 v~~-~gG~~~ 221 (337)
T Consensus 223 igRgal~nPw 232 (321)
T PRK10415 223 IGRAAQGRPW 232 (321)
T ss_pred ECHHHHCCCH
T ss_conf 7566536987