HHsearch alignment for GI: 254781020 and conserved domain: PRK11750
>PRK11750 gltB glutamate synthase subunit alpha; Provisional.
Probab=99.97 E-value=1e-29 Score=193.31 Aligned_cols=287 Identities=18% Similarity=0.141 Sum_probs=196.3
Q ss_pred EEECCCCCCCCHHHCCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHHHC---------
Q ss_conf 03245578998101746299898962568685012663343000256999999998099066052022112---------
Q gi|254781020|r 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--------- 100 (337)
Q Consensus 30 ~l~p~~l~~~~~~~vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~~~--------- 100 (337)
T Consensus 837 ~~~~~~-~pi~l~eVE~~~~I~kr-----F~tgaMS~GsiS--~eAHetlA~AmNriG~~SnsGEGGEd~~R~g~~~~S~ 908 (1483)
T PRK11750 837 ALKPAD-NPIPLDEVEPAEELFKR-----FDSAAMSIGALS--PEAHEALAIAMNRLGGRSNSGEGGEDPARYGTEKNSK 908 (1483)
T ss_pred CCCCCC-CCCCHHHCCCHHHHHHH-----CCCCCCCCCCCC--HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
T ss_conf 738899-99896882537777751-----254446666679--8999999999998488325888887887708988886
Q ss_pred -CHHHHHHHHHHHHCCCHHHHHCCCCCCCC----------CCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHH
Q ss_conf -86688899999866401232202752123----------6799899998776508985762532035665206885243
Q gi|254781020|r 101 -DHNAIKSFELRQYAPHTVLISNLGAVQLN----------YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 (337)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (337)
T Consensus 909 iKQVASGRFGVt~~YL~~A~eiqIKiAQGAKPGEGGqLPG~KV~-~~IA~~R~stPGV~LI--SPPPH-----HDIYSIE 980 (1483)
T PRK11750 909 IKQVASGRFGVTPHYLVNAEVLQIKVAQGAKPGEGGQLPGDKVN-PLIAKLRYSVPGVTLI--SPPPH-----HDIYSIE 980 (1483)
T ss_pred CEEEEECCCCCCHHHHCCHHHEEHHHHCCCCCCCCCCCCCCCCC-HHHHHHCCCCCCCCCC--CCCCC-----CCCCCHH
T ss_conf 33750012778988946965621223147899978889886457-9999870799997804--89996-----6521277
Q ss_pred HHHHHHHHHHHHCCC-CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 079999999987399-7178504786688999999976997999458888651001231023443232443106346889
Q gi|254781020|r 170 DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 (337)
Q Consensus 170 ~~~~~i~~l~~~~~~-pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~a 248 (337)
T Consensus 981 DLaQLI~DLK~~Np~ArVsVKLVs~~GVGTIAaGVAKA~AD~I~ISG~dGGTGAsp~tSikhaGl----PwElGlaEthq 1056 (1483)
T PRK11750 981 DLAQLIFDLKQVNPKALVSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTGASPLTSVKYAGS----PWELGLAETHQ 1056 (1483)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHCCCCEEEECCCCCCCCCCCHHHHCCCCC----CHHHHHHHHHH
T ss_conf 89999999863587754567740236743112011204788899816889877673234203888----65443899999
Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH-----------------------------CCCHH
Q ss_conf 9999852289879972988888999999983888523347999984-----------------------------14668
Q gi|254781020|r 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-----------------------------MDSSD 299 (337)
Q Consensus 249 l~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~-----------------------------~~G~~ 299 (337)
T Consensus 1057 ~L~~n~LR~rV~l~~DGglkTGrDVviaalLGAeefgfgT~~Lia~GCiM~R~CHlntCpvGIATQ~~~Lr~~~f~G~pe 1136 (1483)
T PRK11750 1057 ALVANGLRHKIRLQVDGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHLNNCATGVATQDEKLRKNHYHGLPE 1136 (1483)
T ss_pred HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHH
T ss_conf 99973754638999669856168999998726055434427899844088786425889874015898888634289889
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
Q ss_conf 9999999999999999998089857896149600056
Q gi|254781020|r 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 (337)
Q Consensus 300 gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~i~~ 336 (337)
T Consensus 1137 ~vvn~f~~vAeevReilA~LG~rsl~e~iGr~dlL~~ 1173 (1483)
T PRK11750 1137 MVMNYFEFIAEETREWMAQLGVRSLEDLIGRTDLLEE 1173 (1483)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC
T ss_conf 9999999999999999999684159998486340001