HHsearch alignment for GI: 254781020 and conserved domain: PRK13117
>PRK13117 consensus.
Probab=97.78 E-value=0.0024 Score=38.04 Aligned_cols=163 Identities=13% Similarity=0.133 Sum_probs=97.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 52123679989999877650898576253203566520688524307999999998739971785047866889999999
Q gi|254781020|r 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 (337)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~ 204 (337)
T Consensus 102 Y~N~i~~~G~e~F~~~~~~aGvdGvIi-pDLP~eE------------~~~~~~~~~~~gl~~I~-lv~Ptt~~~Ri~~i~ 167 (268)
T PRK13117 102 YANLVFANGIDNFYARCAEAGVDSVLI-ADVPVEE------------SAPFRQAAKKHGIAPIF-ICPPNADDDTLRQIA 167 (268)
T ss_pred CCCHHHHCCHHHHHHHHHHCCCCEEEE-CCCCHHH------------HHHHHHHHHHCCCCEEE-EECCCCCHHHHHHHH
T ss_conf 262898717999999999769877985-7999788------------58999999867983799-847999999999999
Q ss_pred HCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEE
Q ss_conf 76997999458888651001231023443232443106346889999985228987997298888899999998388852
Q gi|254781020|r 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 (337)
Q Consensus 205 ~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV 284 (337)
T Consensus 168 ~~a~GFiY~vs~~GvTG~~~~~---------------~~~~~~~i~~ik~~-t~~Pv~vGFGIs~~e~v~~~~~~~aDGv 231 (268)
T PRK13117 168 SLGRGYTYLLSRAGVTGAENKA---------------AAPLNHLVEKLKEY-NAPPPLQGFGISEPEQVKAAIKAGAAGA 231 (268)
T ss_pred HHCCCEEEEEECCCCCCCCCCC---------------CHHHHHHHHHHHHC-CCCCEEEEECCCCHHHHHHHHHCCCCEE
T ss_conf 7479859998367778898666---------------27799999999964-7998699837899999999986389989
Q ss_pred HHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHH
Q ss_conf 3347999984146---68999999999999999999
Q gi|254781020|r 285 GLASPFLKPAMDS---SDAVVAAIESLRKEFIVSMF 317 (337)
Q Consensus 285 ~iGr~~l~~~~~G---~~gv~~~l~~l~~el~~~m~ 317 (337)
T Consensus 232 IVGSaiV~~i~~~~~~~~~~~~~v~~~v~~Lk~a~k 267 (268)
T PRK13117 232 ISGSAIVKIIEKNLDNPEKMLAELAEFVRAMKAATK 267 (268)
T ss_pred EECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 987899999987166889999999999999999864