HHsearch alignment for GI: 254781020 and conserved domain: cd00452
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=97.75 E-value=0.0012 Score=39.83 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=48.1
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHH
Q ss_conf 78668899999997699799945888865100123102344323244310634688999998522898799729888889
Q gi|254781020|r 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 (337)
Q Consensus 192 ~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~ 271 (337)
T Consensus 102 PGv~TpsEi~~A~~~G~~~vK~FPa~----------------------~~G~~---~lkal~~pfp~~~~~ptGGI~~-~ 155 (190)
T cd00452 102 PGVATPTEIMQALELGADIVKLFPAE----------------------AVGPA---YIKALKGPFPQVRFMPTGGVSL-D 155 (190)
T ss_pred CCCCCHHHHHHHHHCCCCEEEECCCC----------------------CCCHH---HHHHHHCCCCCCCEEEECCCCH-H
T ss_conf 78799999999998799989989551----------------------14999---9999855489993899679998-8
Q ss_pred HHHHHHHHCCCEEHHHHHHH
Q ss_conf 99999983888523347999
Q gi|254781020|r 272 DILKSIILGASLGGLASPFL 291 (337)
Q Consensus 272 Dv~kAlalGAdaV~iGr~~l 291 (337)
T Consensus 156 N~~~yl~~gv~avG~g~~l~ 175 (190)
T cd00452 156 NAAEWLAAGVVAVGGGSLLP 175 (190)
T ss_pred HHHHHHHCCCEEEEECHHCC
T ss_conf 89999968998999541258