HHsearch alignment for GI: 254781020 and conserved domain: cd00945
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=97.86 E-value=0.0016 Score=39.05 Aligned_cols=125 Identities=20% Similarity=0.259 Sum_probs=76.3
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCC-CH----HHHHHHHHCC
Q ss_conf 999987765089857625320356652068852430799999999873--9971785047866-88----9999999769
Q gi|254781020|r 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGL-SS----MDIELGLKSG 207 (337)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pii~k~v~~~~-~~----~~~~~a~~aG 207 (337)
T Consensus 69 ~e~~~ai~-~GAdeid~v~~~~~~~-----~~~~~~~~~ei~~v~~~~~~g~~~kvi~e~~~l~~~~~i~~a~~~~~~~G 142 (201)
T cd00945 69 AEVEEAID-LGADEIDVVINIGSLK-----EGDWEEVLEEIAAVVEAADGGLPLKVILETRGLKTADEIAKAARIAAEAG 142 (201)
T ss_pred HHHHHHHH-HCCCEEEEECCHHHHH-----CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999-0999899740567775-----66889999999999997357983799961677899999999999999809
Q ss_pred CCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHH
Q ss_conf 9799945888865100123102344323244310634688999998-522898799729888889999999838885233
Q gi|254781020|r 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 (337)
Q Consensus 208 ad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~-~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~i 286 (337)
T Consensus 143 adfvKtstG~~~~~a----------------------t~~~v~~m~~~~~~~~~vk~sGGi~~~~~a~~~l~aGa~~igt 200 (201)
T cd00945 143 ADFIKTSTGFGGGGA----------------------TVEDVKLMKEAVGGRVGVKAAGGIKTLEDALAAIEAGADGIGT 200 (201)
T ss_pred CCEEEECCCCCCCCC----------------------CHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCEEEC
T ss_conf 987985588788989----------------------9999999999828786386358979999999999828653537
Q ss_pred H
Q ss_conf 4
Q gi|254781020|r 287 A 287 (337)
Q Consensus 287 G 287 (337)
T Consensus 201 s 201 (201)
T cd00945 201 S 201 (201)
T ss_pred C
T ss_conf 8