HHsearch alignment for GI: 254781020 and conserved domain: cd00950
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=95.82 E-value=0.077 Score=29.21 Aligned_cols=115 Identities=15% Similarity=0.138 Sum_probs=62.7
Q ss_pred HHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE----CCCCCCHHHHHHHHHCC-CCE
Q ss_conf 9998776508985762532035665206885243079999999987399717850----47866889999999769-979
Q gi|254781020|r 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE----VGCGLSSMDIELGLKSG-IRY 210 (337)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~----v~~~~~~~~~~~a~~aG-ad~ 210 (337)
T Consensus 86 ~~a~~A~~~Gadai~v~pP~y~-------~~s~~~l~~~~~~ia~a~~lPi~lYn~P~~tg~~l~~~~l~~L~~~pnv~g 158 (284)
T cd00950 86 ELTKRAEKAGADAALVVTPYYN-------KPSQEGLYAHFKAIAEATDLPVILYNVPGRTGVNIEPETVLRLAEHPNIVG 158 (284)
T ss_pred HHHHHHHHCCCCEEEECCCCCC-------CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 9999999839998996266578-------979999999999997555997798737641167888899999847999899
Q ss_pred EEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHH
Q ss_conf 994588886510012310234432324431063468899999852289879972988888999999983888523347
Q gi|254781020|r 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 (337)
Q Consensus 211 i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr 288 (337)
T Consensus 159 iK~s--s~-----------------------d~~~~~~~~--~~~~~~~~v~~-G---~d~~~~~~l~~Ga~G~i~~~ 205 (284)
T cd00950 159 IKEA--TG-----------------------DLDRVSELI--ALCPDDFAVLS-G---DDALTLPFLALGGVGVISVA 205 (284)
T ss_pred EECC--CC-----------------------CHHHHHHHH--HHCCCCCEEEC-C---CHHHHHHHHHHCCCEEEEEE
T ss_conf 9858--89-----------------------899999999--86698754644-8---68999999995499699853