HHsearch alignment for GI: 254781020 and conserved domain: cd03332
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=100.00 E-value=0 Score=414.10 Aligned_cols=290 Identities=22% Similarity=0.287 Sum_probs=240.1
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 9999-853025589747568863032455789981017462998989625686850126633430002569999999980
Q gi|254781020|r 8 DHIN-IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 (337)
Q Consensus 8 ~~i~-~a~~e~~~~~n~~~fd~~~l~p~~l~~~~~~~vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~ 86 (337)
T Consensus 38 dY~~gGa~de~tl~~N~~af~~~~l~PRvL--~dv~~~d~~t~llG~~~~~P~~iaP~-g~~~l~hp~gE~~~AraA~~~ 114 (383)
T cd03332 38 AYVAGGAGSESTARANRDAFSRWRIVPRML--RGVTERDLSVELFGRTLAAPLLLAPI-GVQELFHPDAELATARAAAEL 114 (383)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHCCEECCCC--CCCCCCCCCEEECCEECCCCEEECHH-HHHHCCCCCHHHHHHHHHHHH
T ss_conf 886246661699999999998557767113--58888888645798156777388778-774414897789999999983
Q ss_pred CCEEECCCCHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHC---
Q ss_conf 99066052022112866888999998664012322027521236799899998776508985762532035665206---
Q gi|254781020|r 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN--- 163 (337)
Q Consensus 87 g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (337)
T Consensus 115 g~~~~lSt~ss~slEeva~-------~~~~~~~wfQLY~~-~Dr~~~-~~ll~RA~~aG~~aLvlTVD~Pv~G~Rerd~r 185 (383)
T cd03332 115 GVPYILSTASSSSIEDVAA-------AAGDAPRWFQLYWP-KDDDLT-ESLLRRAEKAGYRVLVVTLDTWSLGWRPRDLD 185 (383)
T ss_pred CCCEECCCCCCCCHHHHHH-------HCCCCCEEEEEECC-CCHHHH-HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
T ss_conf 5862205776788999998-------66899639999515-888999-99999999738977999226866687654553
Q ss_pred -----------------------------C-------------------CCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf -----------------------------8-------------------8524307999999998739971785047866
Q gi|254781020|r 164 -----------------------------G-------------------NTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 (337)
Q Consensus 164 -----------------------------~-------------------~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~ 195 (337)
T Consensus 186 ~g~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ltW~di~wlr~~w~~plilKGI---~ 262 (383)
T cd03332 186 LGYLPFLRGIGIANYFSDPVFRKKLAEPVGEDPEAPPPMEAAVARFVSVFSGPSLTWEDLAFLREWTDLPIVLKGI---L 262 (383)
T ss_pred CCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCC---C
T ss_conf 2688643303677754788999973256776545677501459999985378889989999999876998532356---8
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHH-HHCCCCEEEECCCCCCHHHHH
Q ss_conf 8899999997699799945888865100123102344323244310634688999998-522898799729888889999
Q gi|254781020|r 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDIL 274 (337)
Q Consensus 196 ~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~-~~~~~v~IiadGGIr~g~Dv~ 274 (337)
T Consensus 263 ~~eDA~~A~~~G~dgIiVSNHGG---------RQLD~ap---------a~i~~LpeI~~aV~~~~~V~~DgGIRrG~DV~ 324 (383)
T cd03332 263 HPDDARRAVEAGVDGVVVSNHGG---------RQVDGSI---------AALDALPEIVEAVGDRLTVLFDSGVRTGADIM 324 (383)
T ss_pred CHHHHHHHHHCCCCEEEEECCCC---------CCCCCCC---------CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
T ss_conf 99999999975998899807863---------4467883---------27899999999847998499979978679999
Q ss_pred HHHHHCCCEEHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf 9998388852334799998-4146689999999999999999998089857896149
Q gi|254781020|r 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 (337)
Q Consensus 275 kAlalGAdaV~iGr~~l~~-~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~ 330 (337)
T Consensus 325 KAlALGA~~V~iGRp~l~glaa~G~~GV~~~l~iL~~El~~~M~l~G~~si~el~~~ 381 (383)
T cd03332 325 KALALGAKAVLIGRPYAYGLALGGEDGVEHVLRNLLAELDLTMGLAGIRSIAELTRD 381 (383)
T ss_pred HHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
T ss_conf 999769998987789999877231999999999999999999998589997785920