HHsearch alignment for GI: 254781020 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=98.81 E-value=5.5e-07 Score=59.49 Aligned_cols=205 Identities=17% Similarity=0.107 Sum_probs=108.7
Q ss_pred EECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCCC
Q ss_conf 98989625686850126633430002569999999980990660520221128668889999986640123220275212
Q gi|254781020|r 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 (337)
Q Consensus 49 ~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (337)
T Consensus 2 ~Igg~~f~SRLilGT-----gky~s~--~~~~~ai~aSgaeivTVAlRR~~~~~~~~~~~l~~i~~~~~~~LPNTAG--- 71 (248)
T cd04728 2 TIGGKTFSSRLLLGT-----GKYPSP--AIMKEAIEASGAEIVTVALRRVNIGDPGGESFLDLLDKSGYTLLPNTAG--- 71 (248)
T ss_pred EECCEEEECCEEEEC-----CCCCCH--HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCEECCCCCC---
T ss_conf 789988774337864-----899999--9999999996897699998630578888526898752338668765401---
Q ss_pred CCCCCHHHH----HHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 367998999----9877650898576253203566520688524307999999998739971785047866889999999
Q gi|254781020|r 129 NYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 (337)
Q Consensus 129 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~ 204 (337)
T Consensus 72 --c~ta~EAvr~A~laRE~~~t~~IKLEVi~D~-------~~LlPD~~eTl~Aae~Lv~~GF~Vl-pY~~~D~v~akrLe 141 (248)
T cd04728 72 --CRTAEEAVRTARLAREALGTDWIKLEVIGDD-------KTLLPDPIETLKAAEILVKEGFTVL-PYCTDDPVLAKRLE 141 (248)
T ss_pred --CCCHHHHHHHHHHHHHHHCCCEEEEEEECCC-------CCCCCCHHHHHHHHHHHHHCCCEEE-EECCCCHHHHHHHH
T ss_conf --1679999999999999848986999981797-------6779886899999999998899897-86788999999999
Q ss_pred HCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEE
Q ss_conf 76997999458888651001231023443232443106346889999985228987997298888899999998388852
Q gi|254781020|r 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 (337)
Q Consensus 205 ~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV 284 (337)
T Consensus 142 ~~Gc~avMPlgs-------------------PIGSg~Gl~n~~~l~~i~e~~-~vPvIVDAGiG~pS~Aa~aMElG~daV 201 (248)
T cd04728 142 DAGCAAVMPLGS-------------------PIGSGQGLLNPYNLRIIIERA-DVPVIVDAGIGTPSDAAQAMELGADAV 201 (248)
T ss_pred HCCCEEEEECCC-------------------CCCCCCCCCCHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCEE
T ss_conf 749534520456-------------------434798879999999999847-998898479997567899987265533
Q ss_pred HHHHHHHHH
Q ss_conf 334799998
Q gi|254781020|r 285 GLASPFLKP 293 (337)
Q Consensus 285 ~iGr~~l~~ 293 (337)
T Consensus 202 L~NTAIA~A 210 (248)
T cd04728 202 LLNTAIAKA 210 (248)
T ss_pred EHHHHHHCC
T ss_conf 454687716