HHsearch alignment for GI: 254781020 and conserved domain: cd04729
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=96.33 E-value=0.067 Score=29.57 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 98999987765089857625320356652068852430799999999873997178504786688999999976997999
Q gi|254781020|r 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 (337)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~ 212 (337)
T Consensus 132 t~ee~~~A-~~~G~D~vgTTL~GYT~~t~~~~~PD----~~lv~~l~~~~~~pvIaE--Gri~tPe~a~~a~~~GA~aVV 204 (219)
T cd04729 132 TLEEALNA-AKLGFDIIGTTLSGYTEETAKTEDPD----FELLKELRKALGIPVIAE--GRINSPEQAAKALELGADAVV 204 (219)
T ss_pred CHHHHHHH-HHCCCCEEECCCCCCCCCCCCCCCCC----HHHHHHHHHHCCCCEEEE--CCCCCHHHHHHHHHCCCCEEE
T ss_conf 89999999-98499899702145677878899987----899999999759939970--698999999999983998999
Q ss_pred ECC
Q ss_conf 458
Q gi|254781020|r 213 IAG 215 (337)
Q Consensus 213 v~~ 215 (337)
T Consensus 205 VGs 207 (219)
T cd04729 205 VGS 207 (219)
T ss_pred ECC
T ss_conf 895