HHsearch alignment for GI: 254781020 and conserved domain: cd04733
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=98.43 E-value=1.7e-05 Score=50.75 Aligned_cols=146 Identities=16% Similarity=0.219 Sum_probs=83.1
Q ss_pred HHHHHHCCCEEEECCCCHH---HHHHH-CCCCC----------HHHHHHHHHHHHHHCC--CCEEEEEC-----CCCCCH
Q ss_conf 8776508985762532035---66520-68852----------4307999999998739--97178504-----786688
Q gi|254781020|r 139 QAVHVLGADGLFLHLNPLQ---EIIQP-NGNTN----------FADLSSKIALLSSAMD--VPLLLKEV-----GCGLSS 197 (337)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~----------~~~~~~~i~~l~~~~~--~pii~k~v-----~~~~~~ 197 (337)
T Consensus 156 ~rA~~AGfDgVEiH~ahGYLl~qFlS~~~N~RtDeYGGS~ENR~Rf~lEii~avr~~vg~d~~v~~Ris~~d~~~~G~~~ 235 (338)
T cd04733 156 RLAQEAGFDGVQIHAAHGYLLSQFLSPLTNKRTDEYGGSLENRARLLLEIYDAIRAAVGPGFPVGIKLNSADFQRGGFTE 235 (338)
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCH
T ss_conf 99998399989982365548998629876899685798988998899999999999719988699984535424799998
Q ss_pred HH----HHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHH
Q ss_conf 99----99999769979994588886510012310234432324431063468899999852289879972988888999
Q gi|254781020|r 198 MD----IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 (337)
Q Consensus 198 ~~----~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv 273 (337)
T Consensus 236 ~d~~~~~~~l~~~GvD~i~vs~G~---~~~~~~~~~~~~---~~~~~~~-~~~~~a~~ik~-~~~~Pvi~~G~i~~~~~a 307 (338)
T cd04733 236 EDALEVVEALEEAGVDLVELSGGT---YESPAMAGAKKE---STIAREA-YFLEFAEKIRK-VTKTPLMVTGGFRTRAAM 307 (338)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC---CCCCCCCCCCCC---CCCCCCC-CHHHHHHHHHH-HCCCCEEEECCCCCHHHH
T ss_conf 999999999987699889946885---457322477654---4456751-05999999999-849979998998999999
Q ss_pred HHHHHHC-CCEEHHHHHHHH
Q ss_conf 9999838-885233479999
Q gi|254781020|r 274 LKSIILG-ASLGGLASPFLK 292 (337)
Q Consensus 274 ~kAlalG-AdaV~iGr~~l~ 292 (337)
T Consensus 308 e~~l~~g~~DlV~~gR~~ia 327 (338)
T cd04733 308 EQALASGAVDGIGLARPLAL 327 (338)
T ss_pred HHHHHCCCCEEHHHHHHHHH
T ss_conf 99998799510898899997