HHsearch alignment for GI: 254781020 and conserved domain: cd04735
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=98.80 E-value=3.2e-07 Score=60.87 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=98.4
Q ss_pred HHHHHHCCCEEEECCCCHHH---HHHH-CC---CCC-------HHHHHHHHHHHHHHCC------CCEEEEECC-----C
Q ss_conf 87765089857625320356---6520-68---852-------4307999999998739------971785047-----8
Q gi|254781020|r 139 QAVHVLGADGLFLHLNPLQE---IIQP-NG---NTN-------FADLSSKIALLSSAMD------VPLLLKEVG-----C 193 (337)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~---~~~-------~~~~~~~i~~l~~~~~------~pii~k~v~-----~ 193 (337)
T Consensus 151 ~rA~~AGfDgVEiH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~vg~~~~~df~vgvRis~~e~~~~ 230 (353)
T cd04735 151 RRAIEAGFDGVEIHGANGYLIQQFFSPHSNRRTDEWGGSLENRMRFPLAVVKAVQEVIDKHADKDFILGYRFSPEEPEEP 230 (353)
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCC
T ss_conf 99998399989975465759998539988998473679889998899999999999854005897336751586541479
Q ss_pred CCCH----HHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 6688----999999976997999458888651001231023443232443106346889999985228987997298888
Q gi|254781020|r 194 GLSS----MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 (337)
Q Consensus 194 ~~~~----~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~ 269 (337)
T Consensus 231 G~~~~e~~~~~~~l~~~gvD~l~vs~g~~~~~~~------~~-------~~~~~~~~~~~~--~~~~~~iPvi~~G~i~~ 295 (353)
T cd04735 231 GIRMEDTLALVDKLADKGLDYLHISLWDFDRKSR------RG-------RDDNQTIMELVK--ERIAGRLPLIAVGSINT 295 (353)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC------CC-------CCCCHHHHHHHH--HHHCCCCCEEEECCCCC
T ss_conf 9999999999999984799889960377667776------67-------775355899999--99678980999899998
Q ss_pred HHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 89999999838885233479999841466899999999999999999980898578961
Q gi|254781020|r 270 GVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 (337)
Q Consensus 270 g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~ 328 (337)
T Consensus 296 ~~~ae~~l~~gaD~V~~gR~lia----dPd~~~K~~~Gr~~eIr~ci---~~~~~~~~~ 347 (353)
T cd04735 296 PDDALEALETGADLVAIGRGLLV----DPDWVEKIKEGREDEINLEI---DPDDLEELK 347 (353)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHH----CHHHHHHHHCCCHHHHHHCC---CHHHHHHCC
T ss_conf 99999999869982998699997----93199999858952303338---976898647