HHsearch alignment for GI: 254781020 and conserved domain: pfam01070
>pfam01070 FMN_dh FMN-dependent dehydrogenase.
Probab=100.00 E-value=0 Score=404.46 Aligned_cols=287 Identities=25% Similarity=0.299 Sum_probs=242.3
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 899999-8530255897475688630324557899810174629989896256868501266334300025699999999
Q gi|254781020|r 6 KIDHIN-IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 (337)
Q Consensus 6 ~~~~i~-~a~~e~~~~~n~~~fd~~~l~p~~l~~~~~~~vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~ 84 (337)
T Consensus 8 ~~~Y~~gga~~e~t~~~N~~af~~~~l~pr~L--~dv~~~d~st~~lG~~~~~Pi~iap~-g~~~l~~~~ge~~lAraA~ 84 (301)
T pfam01070 8 AFDYIDGGAGDEITLRRNRAAFDRIRLRPRVL--RDVSDRDTSTTLLGQRLSLPFGIAPT-GMQGLAHPDGELALARAAA 84 (301)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCEECCCC--CCCCCCCCCEEECCCCCCCCEEECCC-CHHHHCCCCHHHHHHHHHH
T ss_conf 99998146775299999999998370676445--78877888435788316787678740-1022137645899999999
Q ss_pred HHCCEEECCCCHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCC
Q ss_conf 80990660520221128668889999986640123220275212367998999987765089857625320356652068
Q gi|254781020|r 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 (337)
Q Consensus 85 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T Consensus 85 ~~gi~~~lss~~~~~~e~i~~-------~~~-~~~~fQly~~-~d~~~~~~~i-~ra~~ag~~al~ltvD~~~~g~r~~d 154 (301)
T pfam01070 85 AAGIPFVLSTVASTSLEEVAA-------AAG-GPLWFQLYVP-KDRELTEDLL-ERAEAAGYKALVLTVDTPVLGNRERD 154 (301)
T ss_pred HHCCCEECCCCCCCCHHHHHH-------HCC-CCEEEEEEEC-CCHHHHHHHH-HHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 835870046876555278898-------579-9768998745-8889999999-99997499979997268765778532
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCC
Q ss_conf 85243079999999987399717850478668899999997699799945888865100123102344323244310634
Q gi|254781020|r 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 (337)
Q Consensus 165 ~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~ 244 (337)
T Consensus 155 ~r~----~~~i~~l~~~~~~PvivKGI---~s~eDA~~a~~~Gv~~I~VSnHGG---------RqlD---------~~~~ 209 (301)
T pfam01070 155 LRN----GDDLAWLRDQWKGPLVLKGI---LSPEDAKRAVEAGVDGIVVSNHGG---------RQLD---------GAPA 209 (301)
T ss_pred CCC----HHHHHHHHHHCCCCEEEECC---CCHHHHHHHHHCCCCEEEECCCCC---------CCCC---------CCCC
T ss_conf 043----99999999866998899828---999999999985999999649985---------4468---------8867
Q ss_pred HHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 688999998-5228987997298888899999998388852334799998-41466899999999999999999980898
Q gi|254781020|r 245 TPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 (337)
Q Consensus 245 ~~~al~~~~-~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~-~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 322 (337)
T Consensus 210 t~~~L~eI~~~v~~~~~i~~DGGIR~G~DV~KAlALGA~~V~iGRp~l~ala~~G~~Gv~~~l~~l~~El~~~M~l~G~~ 289 (301)
T pfam01070 210 TIDALPEIVAAVGGRIPVLVDGGIRRGTDVLKALALGADAVLLGRPFLYGLAAGGEAGVAHALEILRDELERTMALLGCT 289 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999998567748996387476268999998089866556899999996579999999999999999999985899
Q ss_pred CHHHHHCC
Q ss_conf 57896149
Q gi|254781020|r 323 RVQELYLN 330 (337)
Q Consensus 323 ~i~el~~~ 330 (337)
T Consensus 290 ~i~~l~~~ 297 (301)
T pfam01070 290 SIADLTPS 297 (301)
T ss_pred CHHHCCHH
T ss_conf 97895998