HHsearch alignment for GI: 254781020 and conserved domain: pfam03437
>pfam03437 BtpA BtpA family. The BtpA protein is tightly associated with the thylakoid membranes, where it stabilizes the reaction centre proteins of photosystem I.
Probab=90.66 E-value=1.1 Score=22.52 Aligned_cols=87 Identities=9% Similarity=-0.011 Sum_probs=53.8
Q ss_pred HHHHHHHHHC-CCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
Q ss_conf 8999999976-997999458888651001231023443232443106346889999985228987997298888899999
Q gi|254781020|r 197 SMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 (337)
Q Consensus 197 ~~~~~~a~~a-Gad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~k 275 (337)
T Consensus 161 ~~~~~~~~~~~~aDaiivTG~~TG~----------------------~~~~~~l~~vk~~~-~~PvlvGSGvt~-~Ni~~ 216 (254)
T pfam03437 161 ESAVLDTIERGLADAVILSGKTTGG----------------------EVDLEELKLAKETV-PVPVLVGSGVNL-ENLEE 216 (254)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCC----------------------CCCHHHHHHHHHHC-CCCEEEECCCCH-HHHHH
T ss_conf 9999999982689899978730279----------------------99999999999626-998899579898-89999
Q ss_pred HHHHCCCEEHHHHHHHHHHC----CCHHHHHHHHHHH
Q ss_conf 99838885233479999841----4668999999999
Q gi|254781020|r 276 SIILGASLGGLASPFLKPAM----DSSDAVVAAIESL 308 (337)
Q Consensus 276 AlalGAdaV~iGr~~l~~~~----~G~~gv~~~l~~l 308 (337)
T Consensus 217 ~l~~-ADG~IVGS~~K~~G~~~n~VD~~RV~~fm~~v 252 (254)
T pfam03437 217 LWSI-ADGFIVGTSIKKGGKFNNEVDIERVSKIAELA 252 (254)
T ss_pred HHHH-CCEEEEEHHEEECCEECCCCCHHHHHHHHHHH
T ss_conf 9987-89999842230588758977999999999984