BLAST/PSIBLAST alignment of GI: 254781020 and GI: 146329192 at iteration 1
>gi|146329192|ref|YP_001209698.1| isopentenyl pyrophosphate isomerase [Dichelobacter nodosus VCS1703A] Length = 344
>gi|146232662|gb|ABQ13640.1| isopentenyl-diphosphate delta-isomerase [Dichelobacter nodosus VCS1703A] Length = 344
 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/335 (54%), Positives = 247/335 (73%), Gaps = 2/335 (0%)

Query: 2   VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61
           +NDRKI+H+  + +D GI+R    FD   LIHRALPEI + ++D    FLGK LSFPL+I
Sbjct: 5   INDRKIEHLAAIERDNGIERYNSGFDRIQLIHRALPEIDYGDIDTRCTFLGKTLSFPLII 64

Query: 62  SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121
           SSMTGG+N+++ RINRNLA AA++ +VAMAVGSQRVM  + ++  SF LR +AP  +L++
Sbjct: 65  SSMTGGDNEVLRRINRNLATAAQQCRVAMAVGSQRVMMRNKDSRDSFALRPFAPDALLLA 124

Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181
           NLGAVQLN  FG+++  QAV VL ADGL+ HLNPLQE +QP G+TNFA L+ K+A ++  
Sbjct: 125 NLGAVQLNAGFGIKECRQAVDVLEADGLYFHLNPLQEAVQPEGDTNFAHLTEKMAAINRE 184

Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL--ESDIGIVFQ 239
           + VPLLLKEVGCGLS  DIELG+ +GIR FDIAGRGGTSWSRIE HR    + D+G+VFQ
Sbjct: 185 LSVPLLLKEVGCGLSPEDIELGISAGIRIFDIAGRGGTSWSRIEYHRRTHPDDDLGLVFQ 244

Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299
           DWG+ T  +L++A     E  F+ASGG+R+G+D++K+++LGA + G+A+P L  AM S+D
Sbjct: 245 DWGLSTAQALKLAYKTHPEMTFVASGGIRSGIDMVKAVVLGAQVCGVAAPLLPFAMQSAD 304

Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334
           AV   I  L++E+  +MFLLG  +  +L      I
Sbjct: 305 AVCRYIRQLQREYRTAMFLLGCSQNDQLRWQEKFI 339