BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781020|ref|YP_003065433.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter asiaticus str. psy62] (337 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781020|ref|YP_003065433.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter asiaticus str. psy62] gi|254040697|gb|ACT57493.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter asiaticus str. psy62] Length = 337 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/337 (100%), Positives = 337/337 (100%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL Sbjct: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI Sbjct: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS Sbjct: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD Sbjct: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA Sbjct: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ Sbjct: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 >gi|315122509|ref|YP_004062998.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495911|gb|ADR52510.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 276/337 (81%), Positives = 319/337 (94%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 MVNDRKIDHINI+CKD IDR K FFDDWHL+HRALPEIS D+VDPSV+FLGKK+SFPLL Sbjct: 1 MVNDRKIDHINIICKDSHIDRKKNFFDDWHLMHRALPEISLDDVDPSVDFLGKKISFPLL 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGGN+K+I+RINRNLAIAAEKTKVAMAVGSQRVMF+D A+KSFELRQYAPHTVLI Sbjct: 61 ISSMTGGNHKLIQRINRNLAIAAEKTKVAMAVGSQRVMFTDPQAVKSFELRQYAPHTVLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGAVQLNY+FG+++A+QAVHVLGADGLFLHLNPLQE+IQ NGNTNFA+LSSKI+LLSS Sbjct: 121 SNLGAVQLNYNFGIKEANQAVHVLGADGLFLHLNPLQEVIQLNGNTNFANLSSKISLLSS 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 MD+P++LKEVGCG+S MDIELGLK+GIRYFD+AGRGGTSWSR+ESHRD+ + GI FQD Sbjct: 181 EMDIPIILKEVGCGMSPMDIELGLKAGIRYFDLAGRGGTSWSRVESHRDITDNAGIFFQD 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPTP +LEMARPYC +A+FI+SGG+RNG+DILKSIILGAS+GGLASPFLKPAMDSS++ Sbjct: 241 WGIPTPYALEMARPYCKKAKFISSGGIRNGMDILKSIILGASIGGLASPFLKPAMDSSES 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V++ IESLRKEF++SMFLLG KRV+ELYLNT+L+RHQ Sbjct: 301 VISVIESLRKEFVISMFLLGIKRVEELYLNTSLVRHQ 337 >gi|89094691|ref|ZP_01167627.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Oceanospirillum sp. MED92] gi|89081037|gb|EAR60273.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Oceanospirillum sp. MED92] Length = 342 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 202/335 (60%), Positives = 260/335 (77%), Gaps = 1/335 (0%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + NDRKI+HI + KDP DR+ +FD L HRALPE++ ++D +FLG +LSFP+L Sbjct: 4 LTNDRKIEHIQAIEKDPQTDRSGHYFDRIRLSHRALPELNLGDIDTGCDFLGYRLSFPML 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG++++I+RINRNLA AAE+ VAMAVGSQRVMF+ A +SF LR++AP LI Sbjct: 64 ISSMTGGDHELIKRINRNLAEAAERCNVAMAVGSQRVMFTTPEAKESFRLREFAPSVPLI 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGAVQLNY +A A+ VL AD L+LHLNPLQE +QP G+T+F+ L+ KI L+S Sbjct: 124 GNLGAVQLNYGIEKAQAEAAISVLEADALYLHLNPLQEAVQPEGDTDFSGLAEKIKKLAS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-SDIGIVFQ 239 +DVP+LLKEVG GLS DIELGL+SGI+ FD+AG GGTSWSRIE HR + SD+G+ FQ Sbjct: 184 ELDVPVLLKEVGSGLSPADIELGLQSGIKCFDVAGSGGTSWSRIEHHRRKDSSDLGLKFQ 243 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+PTPL+L+MA PY + A +ASGGLR+G+D++KS+ILGASL G+A+P LKPAM+S+D Sbjct: 244 DWGLPTPLALKMAEPYLSSATIVASGGLRDGIDMVKSVILGASLCGMAAPLLKPAMESAD 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AVVA IE ++ EF +MFLLG ++ LY N ALI Sbjct: 304 AVVAEIEKIKTEFRTAMFLLGVPDMRTLYNNHALI 338 >gi|78486059|ref|YP_391984.1| isopentenyl pyrophosphate isomerase [Thiomicrospira crunogena XCL-2] gi|91207080|sp|Q31EW3|IDI2_THICR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78364345|gb|ABB42310.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Thiomicrospira crunogena XCL-2] Length = 343 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 249/336 (74%), Gaps = 3/336 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI+ + +D I+R + FD L HR LPE + +VD FL LSFPLLI Sbjct: 6 ITQRKQDHIDWLLQDEKIERQQAGFDQIQLTHRGLPECDYAQVDSGTTFLQHSLSFPLLI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + + IN NLA AAE +VAMAVGSQR M D A KSF+LRQ+AP LI+ Sbjct: 66 SSMTGGASNALNTINENLARAAEHCQVAMAVGSQRTMILDRKAEKSFQLRQFAPTVPLIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA+QLNY FG +A + V VL AD L+LHLNPLQE+IQP G+TNFA L+ KIA L + Sbjct: 126 NMGAIQLNYGFGYDEAQRMVEVLEADALYLHLNPLQEVIQPEGDTNFAKLAEKIAHLKNH 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVF 238 + VP++LKEVGCGLS DI+LGL +GI +FD+AGRGGTSWSRIE+HR +S ++G +F Sbjct: 186 LSVPIILKEVGCGLSEKDIQLGLDAGIEWFDLAGRGGTSWSRIEAHRTEDSQQAELGKMF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 QDWG+ TP +L+ ARP+ ++AQFIASGG+RNG+D++KS+I+GA + G+A+P LKPAM S+ Sbjct: 246 QDWGLTTPQALKQARPFQSQAQFIASGGIRNGIDMVKSVIMGAQICGVAAPLLKPAMAST 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A + IE L++EF + FLLG ++ +L+LN +LI Sbjct: 306 NATIGTIEQLQQEFRTAQFLLGMPKMADLFLNDSLI 341 >gi|146329192|ref|YP_001209698.1| isopentenyl pyrophosphate isomerase [Dichelobacter nodosus VCS1703A] gi|146232662|gb|ABQ13640.1| isopentenyl-diphosphate delta-isomerase [Dichelobacter nodosus VCS1703A] Length = 344 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/335 (54%), Positives = 247/335 (73%), Gaps = 2/335 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +NDRKI+H+ + +D GI+R FD LIHRALPEI + ++D FLGK LSFPL+I Sbjct: 5 INDRKIEHLAAIERDNGIERYNSGFDRIQLIHRALPEIDYGDIDTRCTFLGKTLSFPLII 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+N+++ RINRNLA AA++ +VAMAVGSQRVM + ++ SF LR +AP +L++ Sbjct: 65 SSMTGGDNEVLRRINRNLATAAQQCRVAMAVGSQRVMMRNKDSRDSFALRPFAPDALLLA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQLN FG+++ QAV VL ADGL+ HLNPLQE +QP G+TNFA L+ K+A ++ Sbjct: 125 NLGAVQLNAGFGIKECRQAVDVLEADGLYFHLNPLQEAVQPEGDTNFAHLTEKMAAINRE 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL--ESDIGIVFQ 239 + VPLLLKEVGCGLS DIELG+ +GIR FDIAGRGGTSWSRIE HR + D+G+VFQ Sbjct: 185 LSVPLLLKEVGCGLSPEDIELGISAGIRIFDIAGRGGTSWSRIEYHRRTHPDDDLGLVFQ 244 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+ T +L++A E F+ASGG+R+G+D++K+++LGA + G+A+P L AM S+D Sbjct: 245 DWGLSTAQALKLAYKTHPEMTFVASGGIRSGIDMVKAVVLGAQVCGVAAPLLPFAMQSAD 304 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AV I L++E+ +MFLLG + +L I Sbjct: 305 AVCRYIRQLQREYRTAMFLLGCSQNDQLRWQEKFI 339 >gi|254513308|ref|ZP_05125373.1| isopentenyl-diphosphate delta-isomerase, type 2 [Rhodobacteraceae bacterium KLH11] gi|221532312|gb|EEE35308.1| isopentenyl-diphosphate delta-isomerase, type 2 [Rhodobacteraceae bacterium KLH11] Length = 349 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 243/340 (71%), Gaps = 6/340 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 V+ RK DH+ I+ D G++R+ FD L HRA+PE+ +D V+ +FLGK+LSFPLLI Sbjct: 10 VSSRKHDHLRIIASDSGVERHTGGFDSLRLNHRAMPELDWDSVETHAQFLGKRLSFPLLI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ + I RIN+NLA AAE T VAMAVGSQRVMF++ A SFELR++AP TVLIS Sbjct: 70 SSMTGGDGEHIYRINKNLAEAAEATGVAMAVGSQRVMFTNTQARASFELREFAPETVLIS 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQLN G+++ +AV VL ADGL+LHLNPLQE +QP G+ +F+ +++ IA L Sbjct: 130 NIGAVQLNTGIGLEECSEAVDVLDADGLYLHLNPLQEAVQPEGDRDFSGIAAAIAQLVPD 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD--LESDIGIVFQ 239 M VP+LLKEVG GLS+ DI LGL +GIR+FD+AGRGGTSWSRIE HR D+G+VFQ Sbjct: 190 MRVPVLLKEVGSGLSASDIRLGLAAGIRHFDVAGRGGTSWSRIEYHRREAASDDLGLVFQ 249 Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 DWG+ T +L ARP A IASGG+R+G+D+ KSIILGA L GLA+PFL A Sbjct: 250 DWGLTTVEALLAARPILESSKEHATLIASGGIRSGIDMAKSIILGADLCGLAAPFLSAAQ 309 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S DAV+ I+ L +EF +MFLLG L N ++ Sbjct: 310 ISRDAVIEKIQQLHREFRTAMFLLGCSDCMALKKNGRFLK 349 >gi|47605898|sp|Q8L1I4|IDI2_PARZE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|20429108|emb|CAD24419.1| isopentenyl-diphosphate delta-isomerase [Paracoccus zeaxanthinifaciens] Length = 349 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/341 (55%), Positives = 247/341 (72%), Gaps = 6/341 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 V RK+DH+ + D IDR FD L HRALPE+ FD +D + FLG++LSFPLLI Sbjct: 9 VAGRKLDHLRALDDDADIDRGDSGFDRIALTHRALPEVDFDAIDTATSFLGRELSFPLLI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + IERINRNLA AE+ +VAMAVGSQRVMF+D +A SF+LR +AP L++ Sbjct: 69 SSMTGGTGEEIERINRNLAAGAEEARVAMAVGSQRVMFTDPSARASFDLRAHAPTVPLLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQLN G+++ A+ VL ADGL+LHLNPLQE +QP G+ +FADL SKIA ++ Sbjct: 129 NIGAVQLNMGLGLKECLAAIEVLQADGLYLHLNPLQEAVQPEGDRDFADLGSKIAAIARD 188 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVFQ 239 + VP+LLKEVGCGLS+ DI +GL++GIR+FD+AGRGGTSWSRIE R + D+G+VFQ Sbjct: 189 VPVPVLLKEVGCGLSAADIAIGLRAGIRHFDVAGRGGTSWSRIEYRRRQRADDDLGLVFQ 248 Query: 240 DWGIPTPLSLEMARP----YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 DWG+ T +L ARP + + IASGG+RNGVD+ K +ILGA + G+A+P LK A Sbjct: 249 DWGLQTVDALREARPALAAHDGTSVLIASGGIRNGVDMAKCVILGADMCGVAAPLLKAAQ 308 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +S +AVV+AI L EF +MFLLG + +L N++LIR Sbjct: 309 NSREAVVSAIRKLHLEFRTAMFLLGCGTLADLKDNSSLIRQ 349 >gi|258544190|ref|ZP_05704424.1| type 2 isopentenyl-diphosphate delta-isomerase [Cardiobacterium hominis ATCC 15826] gi|258520566|gb|EEV89425.1| type 2 isopentenyl-diphosphate delta-isomerase [Cardiobacterium hominis ATCC 15826] Length = 340 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 181/332 (54%), Positives = 234/332 (70%), Gaps = 2/332 (0%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H++ + +DP I+R F L HRALPE++ DEVD EFLGK L PLLISSM Sbjct: 7 RKREHLDAIAQDPAIERGDSGFAAIRLTHRALPELALDEVDTRCEFLGKTLRLPLLISSM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG++ I RIN NLA AAE VA+AVGSQRV F+ A SF LR AP+TVL++NLG Sbjct: 67 TGGDDPEIRRINHNLAQAAEHCGVALAVGSQRVQFTTPAAAASFRLRDAAPNTVLLANLG 126 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLNY F + +AV L ADGL+LHLNPLQE +QP G+TNFA L++KIA + A+ V Sbjct: 127 AVQLNYGFTAEHCQRAVETLAADGLYLHLNPLQEAVQPEGDTNFAGLATKIAAVVRALPV 186 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH--RDLESDIGIVFQDWG 242 P+LLKEVG GLS DI LG +G+RYFD+AGRGGTSWSRIE H RD +G+ +QDWG Sbjct: 187 PVLLKEVGSGLSPADITLGKGAGVRYFDLAGRGGTSWSRIEHHRRRDPADTLGLTYQDWG 246 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 + T +L + R + IASGG+RNG+D+ K+++LGA L G+A+PFL A DS+ AV+ Sbjct: 247 LTTAEALRLNRAAHPDITLIASGGIRNGIDMAKAVLLGAELCGIAAPFLAAAQDSAAAVI 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AAI+ L +E+ +++LLG + L N AL+ Sbjct: 307 AAIKRLEREYRTALYLLGCRDNTALRDNHALL 338 >gi|119493251|ref|ZP_01624091.1| hypothetical protein L8106_30505 [Lyngbya sp. PCC 8106] gi|119452724|gb|EAW33902.1| hypothetical protein L8106_30505 [Lyngbya sp. PCC 8106] Length = 360 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 144/328 (43%), Positives = 201/328 (61%), Gaps = 7/328 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ I C D + ++ D + H LPE++ D++D + FLGKKL PLLIS Sbjct: 24 RKADHLRI-CLDEDVQFRQQTNGLDRYRFTHCCLPELNRDDIDLTTSFLGKKLQAPLLIS 82 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG + + IN+ LAIAA++ +AM VGSQRV + +F +R AP +L +N Sbjct: 83 SMTGGTAQA-KMINQRLAIAAQQFNIAMGVGSQRVAVENPQVADTFAVRSLAPDILLFAN 141 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNYD+G+++ + V +L AD L LHLNPLQE IQ G+TNF L KI L + + Sbjct: 142 LGAVQLNYDYGLEQCQRVVDILEADALILHLNPLQECIQTEGDTNFRGLLDKIKTLCTKL 201 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVFQ 239 +P++ KEVG G+S+ L++G+ D+AG GGTSW++IE R + +G F Sbjct: 202 PIPVIAKEVGNGISATMATRLLEAGVTAIDVAGAGGTSWAKIEGERAADPRQRRLGETFA 261 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+PT + R + IASGGLRNG+++ K+I LGA L GLA PFL+ A +S Sbjct: 262 DWGLPTAECITRIRTINSNLPLIASGGLRNGLEVAKAIALGADLAGLAWPFLQAAAESEQ 321 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 AV +E L+ E +F G + + EL Sbjct: 322 AVYRLVEILKAEISTVLFCTGNRTLTEL 349 >gi|320161453|ref|YP_004174677.1| isopentenyl-diphosphate delta-isomerase [Anaerolinea thermophila UNI-1] gi|319995306|dbj|BAJ64077.1| isopentenyl-diphosphate delta-isomerase [Anaerolinea thermophila UNI-1] Length = 342 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/338 (43%), Positives = 208/338 (61%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK DHI I ++ + + IH ALPE++ +E+D +E GK L+ P+LI Sbjct: 7 TESRKSDHIRINLEEDVRSALTTGLERFFFIHEALPEVNLEEIDLHLELFGKTLNAPILI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K IN+ LA AA+ T +AM VGSQRV + A SF++RQ+AP +L + Sbjct: 67 SSMTGGTEKA-GLINQRLAEAAQATGIAMGVGSQRVALENPQAGASFQIRQFAPDILLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQLNY + V+ +AV ++ AD L LHLN LQE IQP G+T FA L KI + Sbjct: 126 NIGAVQLNYGYAVEHCQRAVDMIQADALILHLNSLQEAIQPEGDTRFAGLLGKIEQVCKQ 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP++ KEVG G+S + + +G+ D+AG GGTSWS++E +R + + I F Sbjct: 186 VSVPVIAKEVGWGISERTARMLVDAGVSAIDVAGAGGTSWSQVEMYRIQDERRARIAAAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 ++WGIPT S++M + IASGGL+ GVDI K I LGA +GG+A FLK A S+ Sbjct: 246 RNWGIPTAYSIQMVKKVAPHVPIIASGGLKTGVDIAKCIALGACMGGMAGQFLKAATQST 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +AV+ IE R+E ++MF +G ++ L +T LI + Sbjct: 306 EAVIELIEETREEIRITMFGVGAANLKALS-STPLIEY 342 >gi|332708204|ref|ZP_08428194.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lyngbya majuscula 3L] gi|332353030|gb|EGJ32580.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lyngbya majuscula 3L] Length = 342 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 199/331 (60%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK DHI I C D + N + + H LPE++ E+D S FLGK L PL Sbjct: 4 TQQRKADHIRI-CLDEDVQFRANTNGLERYRFTHCCLPELNRSEIDISTTFLGKSLGAPL 62 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + + IN LA A+ K+AM VGSQRV +F +R AP +L Sbjct: 63 LISSMTGGTEQA-KTINFRLAEVAQHYKLAMGVGSQRVAVEKPEVGHTFAVRSQAPDIIL 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+GAVQLNY +G+++ + V +L ADGL LH+NPLQE IQ NG+TNF L KI L Sbjct: 122 FANIGAVQLNYSYGLEECQKVVDLLTADGLILHINPLQECIQANGDTNFKGLLDKINGLC 181 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGI 236 S + VP++ KEVG G+S+ + L++G+ D+AG GGTSW+++ES R L + +G Sbjct: 182 SKLTVPVIAKEVGNGISAGMAQRLLEAGVTAIDVAGAGGTSWAKVESERGLTAHQRRLGQ 241 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWG+PT + R + IASGGLRNG+D+ K+I LGA + GLA PFL+ A + Sbjct: 242 TFGDWGLPTAECITSIRAIAPDIPLIASGGLRNGLDVAKAIALGADIAGLALPFLQAAAE 301 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S DAV A ++ L E ++F G + +L Sbjct: 302 SVDAVDALVQLLMAEITTALFCTGNATLSDL 332 >gi|254410500|ref|ZP_05024279.1| isopentenyl-diphosphate delta-isomerase, type 2 [Microcoleus chthonoplastes PCC 7420] gi|196182706|gb|EDX77691.1| isopentenyl-diphosphate delta-isomerase, type 2 [Microcoleus chthonoplastes PCC 7420] Length = 342 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 147/334 (44%), Positives = 200/334 (59%), Gaps = 7/334 (2%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI I C + + N+ + + H LPEI+ E+D S EFLGK L PLLIS Sbjct: 7 RKADHIRI-CLNEDVQFNQITNGLERYRFTHCCLPEINRSEIDISTEFLGKTLGAPLLIS 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG + + IN LA A+ ++AM VGSQRV + +F +R AP +L++N Sbjct: 66 SMTGGTQQA-QTINFRLAEVAQTYQLAMGVGSQRVAVENPQVADTFAVRSLAPDILLLAN 124 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNY +G+ + + V +L AD L LHLNPLQE IQ NG+TNF L KI L + Sbjct: 125 LGAVQLNYSYGLDECLRVVELLAADALILHLNPLQECIQTNGDTNFRGLLDKIHKLCCKL 184 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVFQ 239 VP++ KEVG G+S+ + L +G+ D+AG GGTSW+++ES R L + +G F Sbjct: 185 PVPVIAKEVGNGISAAMTQKLLDAGVSAIDVAGAGGTSWAKVESERALNLKQRRLGQTFA 244 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+PT + R E IASGGLRNG+++ K+I LGA L GLA PFL+ A +S++ Sbjct: 245 DWGLPTADCITSIRDIAPEVPLIASGGLRNGLEVAKAIALGADLAGLAFPFLQAASESTE 304 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV +E L E +F G + + + AL Sbjct: 305 AVDELVELLIAEITTVLFCTGNANLSQFKQSDAL 338 >gi|209525265|ref|ZP_03273807.1| isopentenyl-diphosphate delta-isomerase, type 2 [Arthrospira maxima CS-328] gi|209494280|gb|EDZ94593.1| isopentenyl-diphosphate delta-isomerase, type 2 [Arthrospira maxima CS-328] Length = 343 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 198/331 (59%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK DH+ I C + + +K FD + H LPEI+ EV+ S EFLGK L PL Sbjct: 5 TESRKADHLRI-CLESDVQFRQKTNGFDRYRFTHCCLPEINLGEVEVSTEFLGKSLGAPL 63 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + + IN LA AA K K+AM VGSQRV +F +R AP +L Sbjct: 64 LISSMTGGTEQA-KLINTRLARAAFKHKIAMGVGSQRVAVEKPELAPTFAVRSLAPDILL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY G+++ Q + +L AD L LHLNPLQE IQ G+TNF L KIA L Sbjct: 123 FANLGAVQLNYSHGLEQCQQVIDILEADALILHLNPLQECIQTEGDTNFRGLLDKIADLC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGI 236 ++ VP++ KEVG G+S+ + + +G+ D+AG GGTSW+RIE R + +G Sbjct: 183 CSLPVPVIAKEVGNGISATMAKKLIDAGVAAIDVAGAGGTSWARIEGQRATDPRQWRLGE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWG+PT + R + IASGGLRNG+D+ +I LGA L GLA PFL+ A + Sbjct: 243 TFADWGLPTAECITEVRANSPDIPLIASGGLRNGLDVASAIALGADLAGLAWPFLQAAAE 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV + ++ L E +F G++ +++L Sbjct: 303 SEAAVDSLVDILVAEISTVLFCTGSRTIKDL 333 >gi|284050308|ref|ZP_06380518.1| isopentenyl pyrophosphate isomerase [Arthrospira platensis str. Paraca] gi|291569878|dbj|BAI92150.1| isopentenyl pyrophosphate isomerase [Arthrospira platensis NIES-39] Length = 343 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 199/331 (60%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK DH+ I C + + +K FD + H LPEI+ EV+ S EFLGK L+ PL Sbjct: 5 TESRKADHLRI-CLESDVQFRQKTNGFDRYRFTHCCLPEINLGEVEVSTEFLGKSLAAPL 63 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + + IN LA AA + ++AM VGSQRV +F +R AP VL Sbjct: 64 LISSMTGGTEQA-KLINTRLARAAARHQIAMGVGSQRVAVEKPELAPTFAVRSLAPDIVL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+++ + + +L AD L LHLNPLQE IQ G+TNF L KIA L Sbjct: 123 FANLGAVQLNYSYGLEQCQRVIDILEADALILHLNPLQECIQTEGDTNFRGLLDKIADLC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGI 236 + VP++ KEVG G+S+ + + +G+ D+AG GGTSW+RIE R + +G Sbjct: 183 YKLPVPVIAKEVGNGISAAMAKKLIDAGVAAIDVAGAGGTSWARIEGQRATDPRQRRLGE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWG+PT + R + IASGGLRNG+D+ +I LGA L GLA PFL+ A + Sbjct: 243 TFADWGLPTAECITEVRADSPDIPLIASGGLRNGLDVAYAIALGADLAGLAWPFLQAAAE 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV + +E L E +F G++ +++L Sbjct: 303 SEAAVDSLVEILIAEISTVLFCTGSRTMKDL 333 >gi|300864376|ref|ZP_07109248.1| isopentenyl pyrophosphate isomerase [Oscillatoria sp. PCC 6506] gi|300337602|emb|CBN54394.1| isopentenyl pyrophosphate isomerase [Oscillatoria sp. PCC 6506] Length = 349 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 197/327 (60%), Gaps = 5/327 (1%) Query: 5 RKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +HI I + D + + + H LPE+S E+D S +FLGKK++ PLLISS Sbjct: 13 RKAEHIRICLEEDVQFHQTTNGLERYRFAHCCLPELSLSEIDLSTKFLGKKMAAPLLISS 72 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG ++ + IN LA A+ K+AM VGSQRV +F +RQ AP +L +N+ Sbjct: 73 MTGGT-ELAQTINYRLADVAQHYKIAMGVGSQRVALEKPELADTFTVRQRAPDILLFANI 131 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY++G+++ QA+ +L AD L LHLNPLQE IQ G+TNF L KI+ L + Sbjct: 132 GAVQLNYNYGLEQCQQAIDILEADALILHLNPLQECIQTEGDTNFKGLLDKISKLCYKLP 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIVFQD 240 VP++ KEVG G+S + L++G+ D+AG GGTSW++IE R + +G F D Sbjct: 192 VPVIAKEVGNGISGVMAMKLLEAGVSAIDVAGAGGTSWAKIEGERAKNAKQRRLGSTFAD 251 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT + R + IASGGLRNG+D+ K+I LGA + GLA P L+ A +S A Sbjct: 252 WGVPTAECIVNVRTAAPKVPLIASGGLRNGLDVAKAIALGADIAGLAWPLLQAAAESEAA 311 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E L E +F G+ + +L Sbjct: 312 VNELVEILIAEIATVLFCTGSSNLHDL 338 >gi|86610118|ref|YP_478880.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558660|gb|ABD03617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 379 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 211/341 (61%), Gaps = 8/341 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DH++IV + D + F+ + H ALPE+ E+D S EFLGK+L PLL Sbjct: 35 ISERKQDHLDIVLQQDVAAKGIRTGFERFFFEHVALPELLLPEIDLSCEFLGKRLQAPLL 94 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG E +NR LA AA++ +AM VGSQR +++++RQ AP+ +L+ Sbjct: 95 ISSMTGGTEAAHE-LNRQLAAAAQQLGIAMGVGSQRAALEHPELARTYQVRQVAPNILLL 153 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+++A +AV ++ AD L LHLNPLQE +QP G+ ++ L +I L + Sbjct: 154 ANLGAVQLNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVA 213 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP+++KEVG GLS+ + + G+ D+AG GGTSWS +E+HR L+ I Sbjct: 214 QLPVPVVVKEVGNGLSAKVAQRLAECGVAALDVAGAGGTSWSEVEAHRQPDALKKRIAHS 273 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 F+DWGIPT LSL R + +ASGG+RNG+D K+I LGA + G+A+P L + Sbjct: 274 FRDWGIPTALSLLEIRRLLPDLPLVASGGIRNGIDAAKAIRLGADVVGMAAPALHAVSQG 333 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AVV ++ +E ++ F G+ + L A +R Q Sbjct: 334 QMQAVVDTFRAVIEELRIAAFCTGSANLAR--LRQATLRRQ 372 >gi|186681713|ref|YP_001864909.1| isopentenyl pyrophosphate isomerase [Nostoc punctiforme PCC 73102] gi|186464165|gb|ACC79966.1| isopentenyl-diphosphate delta-isomerase, type 2 [Nostoc punctiforme PCC 73102] Length = 349 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 141/339 (41%), Positives = 198/339 (58%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 +RK DHI I C + + ++ + + H LPE++ D++D S FLGK L PL Sbjct: 11 TQNRKADHIRI-CLEEDVQSHQITNGLERYRFTHSCLPELNHDDIDISTAFLGKHLGAPL 69 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + +N+ LA A+ K+AM VGSQRV +F +R+YAP +L Sbjct: 70 LISSMTGGTEQA-AILNQRLAQVAQHYKIAMGVGSQRVAVEKPQVADTFAVRKYAPDVLL 128 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ + + V +L AD L LH+NPLQE IQP G+TNF L KI+ L Sbjct: 129 FANLGAVQLNYKYGLDECLRVVDILEADALILHINPLQECIQPKGDTNFRGLIDKISTLC 188 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP++ KEVG G+S+ + +G+ D+AG GGTSW+++ES R L+ +G Sbjct: 189 FKLPVPVIAKEVGNGISAAIANKLIAAGVAAIDVAGAGGTSWAKVESERAENPLQRRLGK 248 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWG+PT + R + IASGGLR+G+D+ +I LGA + GLA PFL+ A Sbjct: 249 TFADWGLPTAECITTIRAIAPDVPLIASGGLRHGLDVAAAIALGADIAGLAMPFLQAAAI 308 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S AV E L E +F G + +L + +L R Sbjct: 309 SETAVAELAEVLIAEITTVLFCTGNATLYQLKHSGSLQR 347 >gi|254424430|ref|ZP_05038148.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7335] gi|196191919|gb|EDX86883.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7335] Length = 396 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/342 (42%), Positives = 201/342 (58%), Gaps = 26/342 (7%) Query: 5 RKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ I C D + R F+ + H LPE++ D++D FLGK ++ PLLIS Sbjct: 41 RKADHLRI-CLDEDVQSHRITNGFEQYRFTHCCLPELNRDDIDLRSTFLGKAITTPLLIS 99 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG + + IN+ LA A++ +AM VGSQRV + I++F +RQYAP +L +N Sbjct: 100 SMTGGTEQA-QLINQRLAKTAQRFGLAMGVGSQRVAVENPALIETFSVRQYAPDALLFAN 158 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNYD+G+++ +AV L AD L LHLNPLQE +Q G+ NF L +KI L+ + Sbjct: 159 LGAVQLNYDYGIKQCQKAVDALQADALILHLNPLQEAVQTEGDVNFKGLFTKIEQLAKVL 218 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIVFQ 239 VP++ KEVG G+S++ + +G+ D+AG GGTSW+R+ES R ++ +G F Sbjct: 219 PVPVVAKEVGNGISAVMARRLVDAGVAAIDVAGAGGTSWARVESERAKDAKQRRLGNTFA 278 Query: 240 DWGIPTPLSLEMAR------PYCNEA-------------QFIASGGLRNGVDILKSIILG 280 DWGIPT L R P + IASGGLRNG+D K+I LG Sbjct: 279 DWGIPTAECLTSIRSEFQTEPASDSGARISSPSTSSASVSLIASGGLRNGLDAAKAIALG 338 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 A L G+A PFL+ A S +A+ E+L E +F G++ Sbjct: 339 ADLVGIAMPFLQAASQSEEALAELSEALIAELTTVLFCTGSE 380 >gi|220908957|ref|YP_002484268.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 7425] gi|219865568|gb|ACL45907.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7425] Length = 347 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 141/334 (42%), Positives = 201/334 (60%), Gaps = 7/334 (2%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ VC D + + F+ + H LPE+++ ++D FLGK L PLLIS Sbjct: 14 RKAEHLR-VCLDENVQCTQVSTGFERYRFNHSCLPELNYSDIDLQTTFLGKTLGAPLLIS 72 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG ++ IN+ LA A++ ++AM VGSQRV + + K+F++R AP +L +N Sbjct: 73 SMTGGT-ELARIINQRLARVAQEYRIAMGVGSQRVAVENPDTEKTFKVRSLAPDILLFAN 131 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNYD+G+ + + V L AD L LHLNPLQE +Q G+ NFA L KIA L + Sbjct: 132 LGAVQLNYDYGLTECLRVVEFLEADALILHLNPLQEAVQTRGDRNFAGLLDKIAQLCDRL 191 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQ 239 +P++ KEVG G+S++ +++G+ D+AG GGTSW+R+ES R L+ +G F Sbjct: 192 PIPVIAKEVGNGISAVMAGKLMEAGVSAIDVAGAGGTSWARVESERATDPLQRRLGQTFA 251 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT L R + IASGGLRNG+++ K+I LGA L GLA PFL+ A +S + Sbjct: 252 DWGIPTAECLTTIRARYPQIPLIASGGLRNGLEVAKAIALGADLAGLALPFLQAANESEE 311 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + L E +F G + EL + L Sbjct: 312 RLDELADILIAEISTVLFCTGNANLTELKTSNCL 345 >gi|159901199|ref|YP_001547446.1| isopentenyl pyrophosphate isomerase [Herpetosiphon aurantiacus ATCC 23779] gi|159894238|gb|ABX07318.1| isopentenyl-diphosphate delta-isomerase, type 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 344 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 196/331 (59%), Gaps = 12/331 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RKIDH+NIV K+ D N K F +H H ALPE+ +D S FLGK+L P L Sbjct: 9 RKIDHVNIVIKE---DVNAKGITTGFGRYHFEHDALPELDMRRIDLSTTFLGKQLKAPFL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG E+IN LA AA+ VAM VGSQR D + S+++R+ AP L Sbjct: 66 ISSMTGGAAPT-EKINLQLAEAAQALGVAMGVGSQRAAIFDPSVAASYQVRRVAPDIALF 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +GV++ +AV ++ AD L LH N LQE +QP G+TNFA L K+ + Sbjct: 125 ANLGAVQLNYGYGVEQCLRAVDMIQADALILHFNALQEAVQPEGDTNFAGLLQKVEAICR 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 A+ VP++ KEVG G+ + + +++G++ D+AG GGTSWS +E R I Sbjct: 185 ALPVPVIAKEVGNGIGAKTAKRLVEAGVQAIDVAGAGGTSWSEVERFRHRTQAGQRIAAT 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F WGIPT +++ R I SGGLR+G+D+ K+I LGA LG A+P L D Sbjct: 245 FAGWGIPTTEAIKQVRAALPNIGIIGSGGLRSGLDLAKAIALGADLGASAAPNLLAQNDG 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+AV AI ++ E +SMF G + EL Sbjct: 305 GSEAVYEAILAVIDELRISMFCTGAANLAEL 335 >gi|113475280|ref|YP_721341.1| isopentenyl pyrophosphate isomerase [Trichodesmium erythraeum IMS101] gi|110166328|gb|ABG50868.1| isopentenyl-diphosphate delta-isomerase, type 2 [Trichodesmium erythraeum IMS101] Length = 345 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 139/334 (41%), Positives = 200/334 (59%), Gaps = 7/334 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ VC + + N K D + H LPE++ E+D FLGK+L PLLIS Sbjct: 10 RKADHLR-VCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQLGAPLLIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG + + IN LA A+ K+AM VGS+RV + +F +R AP +L +N Sbjct: 69 SMTGGTEQA-KMINYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAPDILLFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNY++G+ + +A+ +L AD L LHLNPLQE IQ G+TNF + KI+ L ++ Sbjct: 128 LGAVQLNYNYGIDQCQRAIDILEADALILHLNPLQECIQTEGDTNFRGILDKISKLCYSL 187 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQ 239 VP++ KEVG G+S + + +G+ D+AG GGTSW++IE R L+ +G F Sbjct: 188 SVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQRRLGNTFG 247 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 +WG+PT + R ++ IASGGLRNG+++ K+I LGA L GLA PFL+ A+ S + Sbjct: 248 NWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQAAVKSEE 307 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ ++ L E +F G + EL + AL Sbjct: 308 SLNLLVDILIAEITTVLFCTGNANLLELKKSQAL 341 >gi|163849399|ref|YP_001637443.1| isopentenyl pyrophosphate isomerase [Chloroflexus aurantiacus J-10-fl] gi|222527397|ref|YP_002571868.1| isopentenyl pyrophosphate isomerase [Chloroflexus sp. Y-400-fl] gi|163670688|gb|ABY37054.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus aurantiacus J-10-fl] gi|222451276|gb|ACM55542.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus sp. Y-400-fl] Length = 346 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 195/329 (59%), Gaps = 7/329 (2%) Query: 5 RKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RKIDHI IV +D F + L HRALPE+ +EVD FLGK ++ PLLISS Sbjct: 10 RKIDHIRIVLHEDVAAKGIVTGFAAYRLPHRALPELDLNEVDTRTTFLGKPIAAPLLISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG E+IN LA AAE + M VGSQR D ++++R+ APH L++N+ Sbjct: 70 MTGGTASA-EKINLALAEAAEYLGLPMGVGSQRAAVMDPRLASTYQVRRVAPHIPLLANV 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY F V +AV ++ AD L LHLNPLQE +QP G+ NF L ++I + ++ Sbjct: 129 GAVQLNYGFTVDHCRRAVEMIEADALILHLNPLQEAVQPEGDVNFKGLLARIEEVCRRLE 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG G+ + D + G+R D+AG GGTSWS +E R D + F D Sbjct: 189 VPVIVKEVGNGIGAADAIRLYEVGVRIIDVAGAGGTSWSEVERFRQPNDTGRRVASAFAD 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--S 298 WG+PT + R + IASGG+R+GVD+ K+I LGA L G A P L A++ + Sbjct: 249 WGLPTTECIREVRAALPDVTLIASGGVRSGVDVAKAIALGADLAGTARPALFDAINERGA 308 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +AV+ + + +E V+MF G +Q L Sbjct: 309 EAVIEGLGAFIRELRVAMFCSGCANLQAL 337 >gi|282899428|ref|ZP_06307395.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Cylindrospermopsis raciborskii CS-505] gi|281195692|gb|EFA70622.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Cylindrospermopsis raciborskii CS-505] Length = 348 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 143/338 (42%), Positives = 197/338 (58%), Gaps = 7/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGI--DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 ++ +RK DHI I C + + D+ + + +H LPE E+D S +FL + L P Sbjct: 10 LIQNRKADHIRI-CLEENVQSDQITTGLEKYRFVHCCLPEQDGKEIDISTKFLNRDLHAP 68 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 LLISSMTGG + INR LA A+K ++AM VGSQRV+ +F +RQYAP + Sbjct: 69 LLISSMTGGTQRA-GIINRRLAEIAQKYRLAMGVGSQRVLLEKPEVADTFAIRQYAPDVL 127 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +NLGAVQLNY G+ + + + L AD L LH+NPLQE IQP G+TNF L KIA L Sbjct: 128 LFANLGAVQLNYQCGIDECLRIIDALEADALILHINPLQEFIQPRGDTNFYGLLDKIAQL 187 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + VP++ KEVG G+S E + +G++ D+AG GGTSW+ +ES R L+ +G Sbjct: 188 CQQLPVPVIAKEVGNGISVNMAEKLISAGVQAIDVAGAGGTSWALVESERAETALQRRLG 247 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F +WGI T + R + IASGGLRNG+D+ K+I LG+ + GLA PFL+ A Sbjct: 248 KTFANWGISTAECITTIRSRFPQLPLIASGGLRNGLDVAKAIALGSDIAGLAMPFLQSAD 307 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S A+ E L E +F G + + EL + L Sbjct: 308 VSISALEELTEVLIAEITTVLFCTGNRNLHELKQSNCL 345 >gi|75908675|ref|YP_322971.1| isopentenyl pyrophosphate isomerase [Anabaena variabilis ATCC 29413] gi|91207069|sp|Q3MAB0|IDI2_ANAVT RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|75702400|gb|ABA22076.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Anabaena variabilis ATCC 29413] Length = 350 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 196/340 (57%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I + D + + H LPEI +++D S FLGKKL+ PLL Sbjct: 12 TQSRKADHIRICLEEDVQFRATTNGLERYRFNHSCLPEIDRNDIDLSATFLGKKLNAPLL 71 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+ LA A+ K AM VGSQRV +F +R+YAP +L Sbjct: 72 ISSMTGGTEQA-GIINQRLARLAQDYKFAMGVGSQRVALEKPQVADTFAIRKYAPDVLLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +G+ + + + +L AD L LH+NPLQE IQP G+ NF L KI+ L Sbjct: 131 ANVGAVQLNYKYGLDECLRIIDMLEADALILHINPLQECIQPKGDVNFQGLLDKISELCE 190 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S + + +G++ D+AG GGTSW+++E R ++ +G Sbjct: 191 ELSVPVIAKEVGNGISGAMAKKLIAAGVQVIDVAGAGGTSWAKVEGERAENSMQRRLGRT 250 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + R IASGGLR+G+DI K+I LGA + GLA PFL+ A++S Sbjct: 251 FADWGIPTAECITSVRAIAPHIPLIASGGLRDGLDIAKAIALGADIAGLAMPFLQAAVES 310 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ E L E +F G + +L + +L R Q Sbjct: 311 EAALQELAEVLIAEITTVLFCTGNATLHQLKHSGSLQRLQ 350 >gi|56752170|ref|YP_172871.1| isopentenyl pyrophosphate isomerase [Synechococcus elongatus PCC 6301] gi|81300742|ref|YP_400950.1| isopentenyl pyrophosphate isomerase [Synechococcus elongatus PCC 7942] gi|81561464|sp|Q5N019|IDI2_SYNP6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|56687129|dbj|BAD80351.1| isopentenyl-dephosphate delta-isomerase [Synechococcus elongatus PCC 6301] gi|81169623|gb|ABB57963.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Synechococcus elongatus PCC 7942] Length = 348 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 192/318 (60%), Gaps = 7/318 (2%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + C + G++ + + + H ALP +S +D +FLG+ L PLLIS Sbjct: 14 RKAEHLQL-CLEAGVESPEVTTGLERYRFQHCALPNLSLQALDLGTQFLGRSLGAPLLIS 72 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG + +RIN LAIAA+K ++AM VGSQRVM +F++R AP +L++N Sbjct: 73 SMTGGT-ETAQRINCRLAIAAQKYRLAMGVGSQRVMLRQPETTPTFDVRDLAPDILLLAN 131 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNY +A Q V LGAD L LHLNPLQE IQ G+T+F L +I L +A+ Sbjct: 132 LGAVQLNYGVTPAEAQQLVDRLGADALILHLNPLQECIQAEGDTDFRGLLGRIGELCAAL 191 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVFQ 239 VP+++KEVG GLS+M L +G+ D+AG GGTSWSR+E R ++ +G F Sbjct: 192 SVPVIVKEVGNGLSAMVAAQLLSAGVAALDVAGAGGTSWSRVEGQRAVDPLLRRLGDRFG 251 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT SL+ R IASGG+R+G+D K+I LGA L GLA PFL A S + Sbjct: 252 DWGIPTAESLQQVRQVSATVPLIASGGIRHGLDAAKAIALGADLVGLARPFLVAADQSEE 311 Query: 300 AVVAAIESLRKEFIVSMF 317 + I L E + F Sbjct: 312 VLDQWITELLAELRIVRF 329 >gi|172036117|ref|YP_001802618.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. ATCC 51142] gi|171697571|gb|ACB50552.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. ATCC 51142] Length = 354 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 195/331 (58%), Gaps = 5/331 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DHINIV + ++ F+ + + H ALP++ DEVD S++ GK L PL Sbjct: 15 LIENRKADHINIVLEKDVTGKDITTGFEQFFIEHDALPDVDLDEVDLSLQLWGKTLQAPL 74 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA AA+ +AM VGSQR N +++++RQ AP +L Sbjct: 75 LISSMTGGTDSA-HTINLNLAEAAQALGIAMGVGSQRAAIEQPNLGETYKIRQVAPDILL 133 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L +KI L+ Sbjct: 134 FANLGAVQLNYGYGIDEAKKAVEMIEADALILHLNPLQEAVQAEGDRNWKGLYNKIETLT 193 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 + +DVP++ KEVG G+S G+ DIAG GGTSWS +E++R + I Sbjct: 194 TQLDVPIIAKEVGNGISGKVARRLANCGVSAIDIAGAGGTSWSEVEAYRQHDPRRRQIAH 253 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +SL R E ASGG+R+G+D K+I LGA+L G A+P L A Sbjct: 254 CFAGWGIPTAMSLMQVRKAVPELPVFASGGIRDGIDAAKAIALGATLVGSAAPLLDAATH 313 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV L + ++ F G EL Sbjct: 314 QSQAVYDKFSILLETLKIATFCAGVSNFTEL 344 >gi|218441508|ref|YP_002379837.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 7424] gi|218174236|gb|ACK72969.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7424] Length = 351 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 135/331 (40%), Positives = 200/331 (60%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK DH+ VC +D R F+++ H LPE +++ FLGK+L +PL Sbjct: 13 IETRKADHLR-VCLEEDVQFQRVTSGFENYRFTHCCLPEFDRKDINLQTRFLGKELGYPL 71 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ +N LA A++ +AM VGSQR+ +F +R +AP+ +L Sbjct: 72 LISSMTGGT-ELARLVNTRLATVAQRYGLAMGVGSQRIALEQPQLASTFAVRSFAPNILL 130 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY GV++ + +L AD L LHLNPLQE +Q G+TNF L +KIA L Sbjct: 131 LANLGAVQLNYGCGVKECLHLIEILEADALILHLNPLQECVQSKGDTNFRGLLAKIAQLC 190 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP+++KEVG G+S+ + +++G+ D+AG GGTSW+++ES R + +G Sbjct: 191 QQLPVPVVVKEVGNGISAPMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDKKQRRLGQ 250 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 VF +WGIPT + R IASGG++NG+D+ K++ LGA L GLA PFL+ A++ Sbjct: 251 VFAEWGIPTAECITTIREMFPTIPLIASGGIKNGLDVAKALALGADLVGLARPFLEAAVE 310 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV ++ L E ++F G V +L Sbjct: 311 SEAAVDEFVDFLIAELETALFCTGNSTVSQL 341 >gi|298492789|ref|YP_003722966.1| isopentenyl-diphosphate delta-isomerase ['Nostoc azollae' 0708] gi|298234707|gb|ADI65843.1| isopentenyl-diphosphate delta-isomerase, type 2 ['Nostoc azollae' 0708] Length = 353 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 193/336 (57%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK DHI I + D + + + H LPE ++D S FLGK L+ PLL Sbjct: 15 TQNRKADHIRICLEEDVQCQQVSTGLERYRFTHCCLPECDRKDIDISTNFLGKHLNAPLL 74 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG INR LA ++ K+AM VGSQRV +F +R+YAP +L Sbjct: 75 ISSMTGGTEHA-GIINRRLAEVTQQYKLAMGVGSQRVALEKPQVADTFAIRKYAPDVLLF 133 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY GV + + + +L AD L LH+NPLQE IQP G+TNF L KIA L S Sbjct: 134 ANLGAVQLNYQCGVDECLRIIDILEADALILHINPLQEFIQPRGDTNFWGLFDKIANLCS 193 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S+ + GI+ D+AG GGTSW+ +ES R L+ +G Sbjct: 194 KLPVPVIAKEVGNGISATMAAKLISVGIQAIDVAGAGGTSWALVESERAENPLQRRLGKT 253 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + R +E IASGGLR+G+D+ K I LGA + GLA PFL+ A S Sbjct: 254 FADWGIPTAKCITSIRAQFSEIPLIASGGLRHGLDVAKVIALGADIAGLAIPFLQAADVS 313 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ E L E +F G + + +L + +L Sbjct: 314 EYALQELTEVLIAEITTVLFCTGNRNLYQLQYSNSL 349 >gi|219847383|ref|YP_002461816.1| isopentenyl pyrophosphate isomerase [Chloroflexus aggregans DSM 9485] gi|219541642|gb|ACL23380.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus aggregans DSM 9485] Length = 346 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 194/329 (58%), Gaps = 7/329 (2%) Query: 5 RKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK+DHI IV +D F + L HRALPE+ +EVD FLGK ++ PLLISS Sbjct: 10 RKVDHIRIVLNEDVAAKGVVTGFAAYRLPHRALPELDLNEVDTRTTFLGKPIAAPLLISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG E+IN LA AAE + M VGSQR D ++++R+ AP L++N+ Sbjct: 70 MTGGTASA-EKINLTLAEAAEYLGLPMGVGSQRAAVMDPRLASTYQVRRVAPRIPLLANV 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY F V +AV ++ AD L LHLNPLQE +QP G+ NF L +KI + ++ Sbjct: 129 GAVQLNYGFTVDHCRRAVEMIEADALILHLNPLQEAVQPEGDVNFKGLLNKIEEVCRRLE 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG G+ + D + G+R D+AG GGTSWS +E R D + F D Sbjct: 189 VPVVVKEVGNGIGAADAIRLYEVGVRIIDVAGAGGTSWSEVERFRQPNDTGRRVASAFAD 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--S 298 WG+PT + R + IASGG+R+GVD+ K+I LGA L G A P L A++ + Sbjct: 249 WGLPTTECVREVRAALPDVTLIASGGVRSGVDVAKAIALGADLAGTARPALFDAINERGA 308 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +AV+ + + +E V+MF G + EL Sbjct: 309 EAVIEGLSAFIRELRVAMFCSGCANLSEL 337 >gi|17232083|ref|NP_488631.1| isopentenyl pyrophosphate isomerase [Nostoc sp. PCC 7120] gi|20978482|sp|Q8YNH4|IDI2_ANASP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|17133727|dbj|BAB76290.1| all4591 [Nostoc sp. PCC 7120] Length = 350 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 196/340 (57%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I + D + + H LPEI +++D S FLGKKL+ PLL Sbjct: 12 TQSRKADHIRICLEEDVQFRDTTNGLERYRFTHSCLPEIDRNDIDLSATFLGKKLNAPLL 71 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+ LA A+ K+AM VGSQRV +F +R+YAP +L Sbjct: 72 ISSMTGGTEEA-GIINQRLAGLAQHYKLAMGVGSQRVAVEKPQVADTFAIRKYAPDVLLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +G+ + + + +L AD L LH+NPLQE IQP G+ NF L KI L S Sbjct: 131 ANVGAVQLNYKYGLDECLRIIDMLEADALILHINPLQECIQPRGDVNFRGLLDKINQLCS 190 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP + KEVG G+S E + +G++ D+AG GGTSW+++E R ++ +G Sbjct: 191 KLPVPAIAKEVGNGISGAMAEKLIAAGVQAIDVAGAGGTSWAKVEGERAENAMQRRLGRT 250 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R IASGGLR+G+D+ K+I LGA + GLA PFL+ A++S Sbjct: 251 FADWGMPTAECITSVRAIAPHIPLIASGGLRDGLDVAKAIALGADIAGLAMPFLQAAVES 310 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ E L E +F G + +L + +L R Q Sbjct: 311 EAALQDLTEVLIAEITTVLFCTGNANLDQLKHSGSLQRLQ 350 >gi|218248744|ref|YP_002374115.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 8801] gi|257061802|ref|YP_003139690.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 8802] gi|218169222|gb|ACK67959.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 8801] gi|256591968|gb|ACV02855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 8802] Length = 341 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 141/333 (42%), Positives = 197/333 (59%), Gaps = 5/333 (1%) Query: 5 RKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH+ I + D + + + H LPE+ F+E+D S FLGK L PLLISS Sbjct: 7 RKDDHLRICLEEDVQFRQLSNGLERYRFTHCCLPELDFNEIDLSTTFLGKSLEAPLLISS 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+ ++AM VGSQRV +F +R AP+ +L++NL Sbjct: 67 MTGGTPQA-KMINFRLAEVAQTYRLAMGVGSQRVAVEKPEVCDTFTVRSVAPNILLLANL 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY +G+++ + V +L AD L LH+NPLQE IQ G+TNF L KI + ++ Sbjct: 126 GAVQLNYTYGIEECLKVVELLQADALILHINPLQECIQTKGDTNFKGLLDKINKVCYSLP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP++ KEVG G+S + +++G+ D+AG GGTSW+++ES R L+ +G F D Sbjct: 186 VPVIAKEVGNGISQPMAQKLIEAGVSAIDVAGAGGTSWAKVESERATNPLKRKLGQTFAD 245 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T L R + E IASGGLRNG+D+ K+I LGA LGGLA PFL+ A +S Sbjct: 246 WGISTADCLTEIRRFHPEIPLIASGGLRNGLDVAKAIALGADLGGLAFPFLQAASESPQT 305 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +E L E +F G + +L + L Sbjct: 306 LEELVELLIAEIKTVLFCTGNANLSDLKITPRL 338 >gi|322495776|emb|CBZ31082.1| isopentenyl-diphosphate delta-isomerase,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 356 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 204/333 (61%), Gaps = 8/333 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 V +RK DHI+I KD + ++ + L ++ALPE+ +++ S EF+GK++SFP Sbjct: 14 VQNRKKDHIDICLHKDVEPHKRHTIWNKYTLPYKALPEVDLQKIETSCEFMGKRISFPFF 73 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P ++ Sbjct: 74 ISSMTGGEAHG-RVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVPML 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G VQLNY FG ++ + V + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 133 ANIGLVQLNYGFGPKEVNNLVDSVHADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQLLP 192 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIGI 236 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE HR E +IG Sbjct: 193 HIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGHRQPYKAEEENIGY 252 Query: 237 VFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +F+D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL A Sbjct: 253 LFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGLDVAKALMMGAEYATAAMPFLAAA 312 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++SS+AV A I+ +R+E VSMF G + ++EL Sbjct: 313 LESSEAVRAVIQRIRQELRVSMFTCGARNIEEL 345 >gi|67922174|ref|ZP_00515689.1| Isopentenyl-diphosphate delta-isomerase [Crocosphaera watsonii WH 8501] gi|67856074|gb|EAM51318.1| Isopentenyl-diphosphate delta-isomerase [Crocosphaera watsonii WH 8501] Length = 356 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 198/333 (59%), Gaps = 9/333 (2%) Query: 1 MVNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DHINIV KD F+ + + H ALP++ DEVD S++ GK L PL Sbjct: 11 LIENRKADHINIVLEKDVTGKGITTGFEQFFMEHDALPDVDLDEVDLSLQVWGKTLQAPL 70 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA A+ +AM VGSQR N K++++R AP +L Sbjct: 71 LISSMTGGTDNA-HFINLNLAETAQALGIAMGVGSQRAGIEQPNLGKTYQIRGVAPDILL 129 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L +KIA L+ Sbjct: 130 FANLGAVQLNYGYGIDEAKKAVDMIEADALILHLNPLQEAVQAEGDRNWKGLYNKIATLA 189 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD-----I 234 + +DVP++ KEVG G+S G+ DIAG GGTSWS +E++R ESD I Sbjct: 190 TKLDVPIIAKEVGNGISGKIARRLADCGVSAIDIAGAGGTSWSEVEAYR--ESDPRRRQI 247 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F WGIPT +SL R E ASGG+R+G+D+ K+I LGA+L G A+P L A Sbjct: 248 AHCFAGWGIPTAVSLMQVRKAVPELPVFASGGIRSGIDVAKAIALGATLVGSAAPLLDAA 307 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV L + ++ F G+ + +L Sbjct: 308 TYQSQAVYDKFSILLETLKIATFCAGSSNLSQL 340 >gi|282897593|ref|ZP_06305593.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Raphidiopsis brookii D9] gi|281197516|gb|EFA72412.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Raphidiopsis brookii D9] Length = 348 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 194/336 (57%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK DHI I + D D+ + + +H LPE ++D S +FL L PLL Sbjct: 11 IQNRKADHIRICLEEDVQSDQITTGLEKYRFVHCCLPEQDGKQIDISTKFLNWDLRAPLL 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + INR LA A+K ++ M VGSQRV+ +F +RQYAP +L Sbjct: 71 ISSMTGGTQRA-GIINRRLAEIAQKYRLVMGVGSQRVLLEKPEVADTFAIRQYAPDVLLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G+ + + + VL AD L LH+NPLQE IQP G+TNF L KIA L Sbjct: 130 ANLGAVQLNYQCGIDECLRIIDVLEADALILHINPLQEFIQPRGDTNFYGLLDKIAQLCK 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + +P++ KEVG G+S E + +G++ D+AG GGTSW+ +ES R L+ +G Sbjct: 190 QLPIPVIAKEVGNGISVNMAEKLISAGVQAIDVAGAGGTSWALVESERAETPLQRRLGKT 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WGIPT + R + IASGGLRNG+D K+I LG+ + GLA PFL+ A S Sbjct: 250 FANWGIPTAECITTIRSRFPQLPLIASGGLRNGLDAAKAIALGSDIAGLAMPFLQSADVS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ E L E +F G + + EL + L Sbjct: 310 ITALEELTEVLIAEITTVLFCTGNRNLHELKQSNCL 345 >gi|170077750|ref|YP_001734388.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. PCC 7002] gi|169885419|gb|ACA99132.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7002] Length = 342 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 195/327 (59%), Gaps = 5/327 (1%) Query: 5 RKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI I + D N+ F+ + H LPE+ ++D + FLGK+L P+LISS Sbjct: 8 RKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLGAPILISS 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + ++IN LA A+ ++AM VGSQRV +F +RQ AP +L +N+ Sbjct: 68 MTGGTAQA-QQINFRLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDALLFANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY +GV++ + V +L AD L LHLNPLQE IQP G+TNF L KI + + Sbjct: 127 GAVQLNYGYGVEECRKIVDLLEADALILHLNPLQECIQPQGDTNFKGLLDKIEQVCHQLP 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP++ KEVG G+S ++ + G++ D+AG GGTSW+++E+ R L ++G F D Sbjct: 187 VPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNLGQTFGD 246 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT L Y E IASGGLRNG+D K+I LGA L G A PFLK A +S +A Sbjct: 247 WGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAASESPEA 306 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +E L E +F G Q+L Sbjct: 307 LAEWVELLLLELRTVLFCTGNANFQQL 333 >gi|156742187|ref|YP_001432316.1| isopentenyl pyrophosphate isomerase [Roseiflexus castenholzii DSM 13941] gi|156233515|gb|ABU58298.1| isopentenyl-diphosphate delta-isomerase, type 2 [Roseiflexus castenholzii DSM 13941] Length = 345 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 191/324 (58%), Gaps = 7/324 (2%) Query: 3 NDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ IV +D F + + H A PE+ E+D + FLGK++ PLLI Sbjct: 8 SSRKLDHVRIVLGEDVAAKGVTTGFAAYRMPHEAAPELDLAEIDTGLTFLGKRMRAPLLI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + RIN LA AAE +AM VGSQR D +++ +R AP L++ Sbjct: 68 SSMTGGARD-VARINLALAEAAETLGLAMGVGSQRAALVDPRVAETYRVRHVAPTIPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQLNY FGV + +AV ++ AD L LH N LQE +QP GNTNF L +I + + Sbjct: 127 NLGAVQLNYGFGVDECRRAVEMIEADALVLHFNALQEAVQPEGNTNFKGLLRRIEEVCTR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 +DVP+++KEVG G+ + + +G++ D+AG GGTSWS +E R + + + F Sbjct: 187 LDVPVIVKEVGNGIGAATARRLVDAGVKVIDVAGAGGTSWSEVERFRHKTERGAQVAAAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS- 297 WGIPT ++ R + I SGG+R+GVD+ K+I LGA L A P L PA+D Sbjct: 247 AGWGIPTTEAIRQVRAALPDITIIGSGGVRSGVDVAKAIALGADLAATAKPALIPAVDER 306 Query: 298 -SDAVVAAIESLRKEFIVSMFLLG 320 ++AV+ +++ E ++MF G Sbjct: 307 GAEAVIESLQVYIDELRIAMFCTG 330 >gi|16120045|ref|NP_395633.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|16120317|ref|NP_395905.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|169237224|ref|YP_001690430.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|169237728|ref|YP_001690931.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|13878554|sp|Q9HHE4|IDI2_HALSA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|10584141|gb|AAG20768.1| carotenoid biosynthetic protein [Halobacterium sp. NRC-1] gi|10584461|gb|AAG21040.1| carotenoid biosynthetic protein [Halobacterium sp. NRC-1] gi|167728290|emb|CAP15089.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|167728505|emb|CAP15329.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] Length = 360 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 18/338 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 DRK DH+ IV ++ ++ FDD HL+H ALPE+ +D +DPS++FLG LS P+ Sbjct: 8 QTEDRKDDHLQIV-QERDVETTGTGFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIF 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHT 117 I SMTGG++ E INR LA AA +T +AM +GSQR + D ++S+ + R AP Sbjct: 67 IESMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDA 125 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I Sbjct: 126 FIYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIER 184 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------E 231 +S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 185 VSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQ 244 Query: 232 SDIGIVFQDWGIPTPLS-LE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 IG +F++WGIPT S +E +A C IASGG+R G+D+ K+I LGA GGLA P Sbjct: 245 KQIGTLFREWGIPTAASTIECVAEHDC----VIASGGVRTGLDVAKAIALGARAGGLAKP 300 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FLKPA D DAV+ + L E +MF+ G+ + EL Sbjct: 301 FLKPATDGPDAVIERVGDLIAELRTAMFVTGSGSIDEL 338 >gi|10803607|ref|NP_046005.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|10803696|ref|NP_046094.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|7444262|pir||T08277 carotenoid biosynthesis protein homolog H0660 - Halobacterium sp. (strain NRC-1) plasmid pNRC100 gi|2822338|gb|AAC82844.1| unknown [Halobacterium sp. NRC-1] gi|2822427|gb|AAC82933.1| unknown [Halobacterium sp. NRC-1] Length = 379 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 142/337 (42%), Positives = 205/337 (60%), Gaps = 18/337 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DH+ IV ++ ++ FDD HL+H ALPE+ +D +DPS++FLG LS P+ I Sbjct: 28 TEDRKDDHLQIV-QERDVETTGTGFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIFI 86 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTV 118 SMTGG++ E INR LA AA +T +AM +GSQR + D ++S+ + R AP Sbjct: 87 ESMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDAF 145 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I + Sbjct: 146 IYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIERV 204 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ES 232 S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 205 SEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQK 264 Query: 233 DIGIVFQDWGIPTPLS-LE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IG +F++WGIPT S +E +A C IASGG+R G+D+ K+I LGA GGLA PF Sbjct: 265 QIGTLFREWGIPTAASTIECVAEHDC----VIASGGVRTGLDVAKAIALGARAGGLAKPF 320 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LKPA D DAV+ + L E +MF+ G+ + EL Sbjct: 321 LKPATDGPDAVIERVGDLIAELRTAMFVTGSGSIDEL 357 >gi|315425794|dbj|BAJ47448.1| isopentenyl-diphosphate delta-isomerase [Candidatus Caldiarchaeum subterraneum] gi|315427676|dbj|BAJ49272.1| isopentenyl-diphosphate delta-isomerase [Candidatus Caldiarchaeum subterraneum] Length = 358 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 195/333 (58%), Gaps = 10/333 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI I + R + + L+H+A PEI D++ FLG++ S P +I Sbjct: 3 IEARKSDHIKISLEKDVSYRKSTWLEYVELVHQAAPEIDPDDIQTETIFLGRRFSHPFII 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SMTGG + ERIN NL AA KV M VGSQR + +F R++ P LI Sbjct: 63 ESMTGGTAEA-ERINANLGEAAAIFKVPMGVGSQRAGVVKPETVYTFRAAREHGPDAFLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQL + GV+ +AV ++ AD L +HLNPLQEIIQP+G F +LS + L Sbjct: 122 GNIGAVQL-VENGVEMGVKAVEMIDADALAVHLNPLQEIIQPDGKARFRNLSKTLEKLRK 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS-----RIESHRDLESD-I 234 + VP++LKE+GCGLS + + ++G+ FD+AG GGT+W+ R E RD+E + Sbjct: 181 EVSVPIILKEIGCGLSREVVAMADEAGVDAFDVAGSGGTNWTMIEMIRAEEMRDIEKKAL 240 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 VF +WGIPT ++ M IASGGLR G+D K+I LGAS+ GLA PFL+PA Sbjct: 241 AEVFLEWGIPTAAAV-MEAVDATTKPVIASGGLRTGLDAAKAIALGASMAGLARPFLEPA 299 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S + V+A ++ L + SMFL G + V EL Sbjct: 300 TKSVEDVLATLKRLSDQLKTSMFLTGCRSVDEL 332 >gi|86607021|ref|YP_475784.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. JA-3-3Ab] gi|86555563|gb|ABD00521.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. JA-3-3Ab] Length = 391 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/341 (40%), Positives = 211/341 (61%), Gaps = 8/341 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DH++IV + R + F+ + H ALPE+ E+D S +FLGK+L PLL Sbjct: 41 ISERKQDHLDIVLRQDVNARGIRTGFERFFFEHVALPELLLPEIDLSCQFLGKRLQAPLL 100 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + E +N LA AA++ +AM VGSQR +++++R AP +L+ Sbjct: 101 ISSMTGGTDTARE-LNLYLAAAAQELGIAMGVGSQRAALEHPELAQTYQVRPVAPDILLL 159 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+++A +AV ++ AD L LHLNPLQE +QP G+ ++ +L +I L + Sbjct: 160 ANLGAVQLNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRNLYRRIEQLVN 219 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP+L+KEVG GLS+ + G+ D+AG GGTSWS +E+HR L+ I Sbjct: 220 QLPVPVLVKEVGNGLSAQVARRLAECGVAALDVAGAGGTSWSEVEAHRQTDPLQKRIAHS 279 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 F+DWGIPT L+L R + +ASGG+R G+D K+I LGA + G+A+P L + Sbjct: 280 FRDWGIPTALALLEIRRFLPNLPLVASGGIRTGIDAAKAIRLGADVVGMAAPALHAVSRG 339 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + AVV + ++ +E ++ F G+ + + L A +R Q Sbjct: 340 RAQAVVDSFRAVIEELRIAAFCTGSANLAQ--LRQAALRWQ 378 >gi|238650583|ref|YP_002916435.1| isopentenyl pyrophosphate isomerase [Rickettsia peacockii str. Rustic] gi|259491447|sp|C4K1D6|IDI2_RICPU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|238624681|gb|ACR47387.1| isopentenyl pyrophosphate isomerase [Rickettsia peacockii str. Rustic] Length = 342 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVHYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E +++G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIEAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LFEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|119509807|ref|ZP_01628951.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] gi|119465542|gb|EAW46435.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] Length = 348 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 199/337 (59%), Gaps = 7/337 (2%) Query: 2 VNDRKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +H+ VC +D + F+ + H LPEI+ +++ FLGK + P+ Sbjct: 11 IEARKAEHLR-VCLEEDVSCQQVTSGFERYRFTHNCLPEINRSDINLQTSFLGKTVGAPV 69 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ + +N LA A++ ++AM VGSQR++ + +F +R +AP +L Sbjct: 70 LISSMTGGT-ELAKLVNTRLATIAQRYRLAMGVGSQRIVIEQPHLASTFAVRSFAPDILL 128 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY G+ V+ L AD L LHLNPLQE +Q G+TNFA L +KIA L Sbjct: 129 LANLGAVQLNYGCGLNDCLHLVNSLQADALILHLNPLQECVQSRGDTNFAGLLAKIAQLC 188 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP+++KEVG G+S+ + + +G+ D+AG GGTSW+++ES R D + +G Sbjct: 189 EQLPVPIVVKEVGNGISAPMAQKLMDAGVAAIDVAGAGGTSWAKVESQRAEDDQQRRLGQ 248 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWG+PT L R IASGGL NG+D+ K+I LGA L GLA PFL A+ Sbjct: 249 TFGDWGLPTADCLNSIRAIAPTFPLIASGGLLNGLDVAKAIALGADLAGLARPFLAAAVQ 308 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S AV + L E ++F G + +L + AL Sbjct: 309 SEAAVDQLAQVLIAELETALFCTGNATLAQLRSSGAL 345 >gi|72550058|ref|XP_843634.1| isomerase [Leishmania major strain Friedlin] gi|56292025|emb|CAI29178.1| isopentenyl-pyrophosphate isomerase [Leishmania major] gi|323364154|emb|CBZ13161.1| putative isomerase [Leishmania major strain Friedlin] Length = 357 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/335 (39%), Positives = 204/335 (60%), Gaps = 11/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWH---LIHRALPEISFDEVDPSVEFLGKKLSFP 58 V RK DHI+I C ++ +K+ W+ L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDI-CLHQDVEPHKRRTSIWNKYTLPYKALPEVDLQKIDTSCEFMGKRISFP 72 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P Sbjct: 73 FFISSMTGGEAHG-RVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVP 131 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+G VQLNY FG ++ + V+ + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 132 MLANIGLVQLNYGFGPKEVNNLVNSVRADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQL 191 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----LESDI 234 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +I Sbjct: 192 LPHIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKAEEENI 251 Query: 235 GIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G + +D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL Sbjct: 252 GYLLRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKALMMGAEYATAAMPFLA 311 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++SS+AV A I+ +R+E VSMF G + ++EL Sbjct: 312 AALESSEAVRAVIQRMRQELRVSMFTCGARNIEEL 346 >gi|229586801|ref|YP_002845302.1| isopentenyl pyrophosphate isomerase [Rickettsia africae ESF-5] gi|259491446|sp|C3PNP9|IDI2_RICAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|228021851|gb|ACP53559.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia africae ESF-5] Length = 342 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|34581619|ref|ZP_00143099.1| hypothetical carotenoid biosynthesis protein [Rickettsia sibirica 246] gi|28263004|gb|EAA26508.1| hypothetical carotenoid biosynthesis protein [Rickettsia sibirica 246] Length = 342 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G+ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVEVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|146102259|ref|XP_001469320.1| isomerase; isopentenyl-diphosphate delta-isomerase [Leishmania infantum] gi|134073689|emb|CAM72426.1| putative isomerase [Leishmania infantum JPCM5] gi|322503343|emb|CBZ38428.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 357 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 133/335 (39%), Positives = 203/335 (60%), Gaps = 11/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWH---LIHRALPEISFDEVDPSVEFLGKKLSFP 58 V RK DHI+I C ++ +K+ W+ L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDI-CLHKDVEPHKRRTSIWNKYTLPYKALPEVDLQKIDTSCEFMGKRISFP 72 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P Sbjct: 73 FFISSMTGGEAHG-RVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVP 131 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+G VQLNY FG ++ + V + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 132 MLANIGLVQLNYGFGPKEVNNLVDSVRADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQL 191 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----LESDI 234 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +I Sbjct: 192 LPLIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKVEEENI 251 Query: 235 GIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL Sbjct: 252 GYLFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKALMMGAEYATAAMPFLA 311 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++SS+AV A I+ +R+E VSMF G + + +L Sbjct: 312 AALESSEAVRAVIQRMRQELRVSMFTCGARNIGDL 346 >gi|15892667|ref|NP_360381.1| isopentenyl pyrophosphate isomerase [Rickettsia conorii str. Malish 7] gi|20138651|sp|Q92HM7|IDI2_RICCN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15619839|gb|AAL03282.1| carotenoid biosynthesis protein-like protein [Rickettsia conorii str. Malish 7] Length = 342 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 134/327 (40%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGG ++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGFKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|229542957|ref|ZP_04432017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus coagulans 36D1] gi|229327377|gb|EEN93052.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus coagulans 36D1] Length = 343 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 137/331 (41%), Positives = 188/331 (56%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ RK +HI +V ++ G D F + + H+ALPE+ F+E+ FLGK L P Sbjct: 6 ISKRKAEHIRVVLEENVAGKDTTTGF-EKYRFEHQALPELDFEEISTETTFLGKPLKAPF 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + INRNLA AAEK A A+GS R +F++R APH + Sbjct: 65 LISSMTGGTAQA-RTINRNLAQAAEKRGWAFALGSTRAALESPEQAYTFQVRDVAPHIPV 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY +G+ + + V + GAD L LH N LQE+ Q GNTNF DL KI L Sbjct: 124 LANLGAVQLNYGYGIDECRRIVELTGADALILHFNSLQEVFQKGGNTNFKDLLVKIEDLC 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGI 236 S ++VP+ KEVG G++ E G+ + D+AG GGTSWS++E + L+ Sbjct: 184 SRLEVPVGCKEVGWGINGRLAEKLYSVGVSFVDVAGSGGTSWSQVEKYLTSDPLKKAAAE 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WG PT + AR + +ASGGL+NGVD K+I LGA L G L A+ Sbjct: 244 AFSGWGNPTAECITQARNLGLQGTLVASGGLKNGVDAAKAIALGADLAGFGRKLLHDAVH 303 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S DA+++ E E ++MF +G K + L Sbjct: 304 SVDALLSTYEQTELELKIAMFGIGAKDLSAL 334 >gi|301062391|ref|ZP_07203052.1| isopentenyl-diphosphate delta-isomerase, type 2 [delta proteobacterium NaphS2] gi|300443504|gb|EFK07608.1| isopentenyl-diphosphate delta-isomerase, type 2 [delta proteobacterium NaphS2] Length = 352 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 197/326 (60%), Gaps = 6/326 (1%) Query: 6 KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 K +HI I ++ N F+++ I+ LPEI F++VD S FLGK +S P +IS MT Sbjct: 19 KKEHIRICLEENVESLNTTGFENYCFINNPLPEIDFEDVDTSCSFLGKSISAPFIISPMT 78 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 GG + + +IN NLA+AA + V M+VGSQR+ D + I SF++R AP L++NLGA Sbjct: 79 GGCD-LSGKINHNLAMAARELGVVMSVGSQRLGLEDPSLISSFQVRDVAPDIPLLANLGA 137 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 V LNY +G+++ + V ++GAD L L+LNP+Q++ Q GN F L+ KI + + VP Sbjct: 138 VYLNYGYGLEECERVVDMIGADALMLYLNPMQKVFQGGGNIKFRGLAEKIGYICKHLSVP 197 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH--RDLESDIGIVFQDWGI 243 +++KEVG GLS L K+G+ D+AG GGTSW +I + D + F WG+ Sbjct: 198 VIVKEVGFGLSDSAAMLLKKAGVSMLDVAGSGGTSWVKITRYLKGDFSAAANAHFDGWGV 257 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 PT +L + IASGG+RNGV + K++ LGAS G+A P L PAM+S +AV Sbjct: 258 PTADALISLCEVVKDIPIIASGGIRNGVHMAKAMALGASYVGMALPLLAPAMESGEAVTK 317 Query: 304 AIESLRKEFIVSMFLLG---TKRVQE 326 ++ + E V+MF G T R++E Sbjct: 318 KVKGMINELKVAMFSCGAIDTTRLRE 343 >gi|157828615|ref|YP_001494857.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933329|ref|YP_001650118.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. Iowa] gi|166226208|sp|A8GSH4|IDI2_RICRS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044242|sp|B0BXY6|IDI2_RICRO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157801096|gb|ABV76349.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908416|gb|ABY72712.1| isopentenyl-diphosphate delta-isomerase [Rickettsia rickettsii str. Iowa] Length = 342 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 133/327 (40%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPE+++D ++ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTQNVESTLKSGFESIHFIHNALPELNYDSINTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVHYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LFEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|154345365|ref|XP_001568624.1| isomerase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065961|emb|CAM43744.1| putative isopentenyl-diphosphate delta-isomerase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 357 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 134/335 (40%), Positives = 202/335 (60%), Gaps = 11/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNK---KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 V RK DHI+I C ++ K + + L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDI-CLRKNVEPRKGSTSIWSKYTLPYKALPEVDLRKIDTSCEFMGKRISFP 72 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 LISSMTGG IN NLA A E K+ +GS R++ +A+ +F +++ P Sbjct: 73 FLISSMTGGEAHG-RVINENLAKACEVEKIPFGLGSMRIINRYASAVHTFNVKELCPSVP 131 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+G VQLNY FG ++ + V + ADGL +HLN QE QP G+TNF L K+ L Sbjct: 132 MLANIGLVQLNYGFGPKEVNNLVDSVRADGLCIHLNHTQEACQPEGDTNFEGLIEKLRQL 191 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +I Sbjct: 192 LPHIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKVEEENI 251 Query: 235 GIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D G+PT + L + P + IA GG+RNG+D+ K++++GAS A PFL Sbjct: 252 GYLFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKTLMMGASYATAAMPFLA 311 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++SS+AV A I+ +R+E +SMF G + ++EL Sbjct: 312 AALESSEAVRAVIQRMRQELRISMFTCGARNIEEL 346 >gi|157803691|ref|YP_001492240.1| isopentenyl pyrophosphate isomerase [Rickettsia canadensis str. McKiel] gi|166226207|sp|A8EYM2|IDI2_RICCK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157784954|gb|ABV73455.1| isopentenyl pyrophosphate isomerase [Rickettsia canadensis str. McKiel] Length = 342 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 138/328 (42%), Positives = 204/328 (62%), Gaps = 6/328 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI I K F+ IH ALPEI++D +D + FLGK L P+LISS Sbjct: 10 ERKQEHIEINLTKNIESTLKSGFESIQFIHNALPEINYDNIDTTTTFLGKALQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA AA+K +AM +GS RV+ + + IK+F +R AP +L++N+ Sbjct: 70 MTGGTARA-RDINYRLAEAAQKAGIAMGLGSMRVLLAAADTIKTFAVRHIAPDILLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V AD L LHLN LQE+ QP GN N+A+L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDATKADALILHLNVLQELTQPEGNRNWANLLPKIREVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + + G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 VPVIVKEVGYGLSKQVAKSLIDVGVKTLDIAGSGGTSWSQVEAYRAKNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R IASGGL++G+D K+I +GA++ GLA LK A+D+S+ Sbjct: 249 WGIPTLDSLKMVREISKNVSIIASGGLKSGIDGAKAIRMGANIFGLAGQLLK-AVDNSEY 307 Query: 301 VVA-AIESLRKEFIVSMFLLGTKRVQEL 327 +V+ I+ + K+ ++M G++ +++L Sbjct: 308 LVSEEIQLIIKQLKITMLCTGSRTLKDL 335 >gi|309791751|ref|ZP_07686241.1| isopentenyl-diphosphate delta-isomerase, type 2 [Oscillochloris trichoides DG6] gi|308226244|gb|EFO79982.1| isopentenyl-diphosphate delta-isomerase, type 2 [Oscillochloris trichoides DG6] Length = 327 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 184/307 (59%), Gaps = 6/307 (1%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F + L H A+PEI +VD FLGK L PLLISSMTGG + + E+IN LA AAE Sbjct: 15 FGAYRLPHTAIPEIDLADVDTRTTFLGKSLRAPLLISSMTGGAS-VAEQINLALAEAAEY 73 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +AM VGSQR +D ++++R+ AP+ L++N+GAVQLNY +GV++ +A+ ++ Sbjct: 74 LGLAMGVGSQRAAIADPRLAHTYQVRRVAPNIALLANIGAVQLNYGYGVEQCRRAIEMIE 133 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 AD L LHLNPLQE +QP GNTNF L KI + + VP+++KEVG G+ + D + Sbjct: 134 ADALILHLNPLQEAVQPEGNTNFKGLLGKIEAVCKELPVPVVIKEVGNGIGADDARRLYE 193 Query: 206 SGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G+R D+AG GGTSWS +E R D + F DWGIPT + R I Sbjct: 194 CGVRVIDVAGAGGTSWSEVERFRQTSDQGRRVAGAFADWGIPTAECIREVRAALPHVTLI 253 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD--SSDAVVAAIESLRKEFIVSMFLLG 320 SGG+R GVD+ K+I LGA + G P L ++ ++AV+ +E+L +E V+M G Sbjct: 254 GSGGVRTGVDVAKAIALGADVVGTTKPALADSISERGAEAVIEGLEALLRELRVAMLCSG 313 Query: 321 TKRVQEL 327 ++ L Sbjct: 314 CVDLRAL 320 >gi|67459177|ref|YP_246801.1| isopentenyl pyrophosphate isomerase [Rickettsia felis URRWXCal2] gi|75536391|sp|Q4ULD7|IDI2_RICFE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|67004710|gb|AAY61636.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia felis URRWXCal2] Length = 345 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/327 (41%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I F+ IH ALPEI++D +D + FLGK L P+LISS Sbjct: 13 ERKQDHIEINLMKNVASTLTSGFESMQFIHNALPEINYDSIDTTSTFLGKSLQAPILISS 72 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K +AM +GS RV+ + + I +F +R AP L++N+ Sbjct: 73 MTGGTTRAGD-INYRLAQAAQKAGIAMGLGSMRVLLTKPDTITTFAVRDVAPDIPLLANI 131 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V V+ AD L LHLN LQE+ QP GN N+ +L KI L + + Sbjct: 132 GAVQLNYFVTPKECQYLVDVVKADALILHLNVLQELTQPEGNRNWENLLPKIKELVNYLS 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS E + G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 192 VPVIVKEVGYGLSKKVAESLIGVGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 251 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + IASGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 252 WGIPTLDSLKMVREVSGDIPIIASGGLKSGIDGAKAIRMGANIFGLAGQFLKAADTSESL 311 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + ++ + ++ ++M G++ +++L Sbjct: 312 LSEEVQLIIEQLKITMLCTGSRTLKDL 338 >gi|157825899|ref|YP_001493619.1| isopentenyl pyrophosphate isomerase [Rickettsia akari str. Hartford] gi|166226205|sp|A8GNY6|IDI2_RICAH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157799857|gb|ABV75111.1| isopentenyl pyrophosphate isomerase [Rickettsia akari str. Hartford] Length = 342 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/326 (42%), Positives = 195/326 (59%), Gaps = 4/326 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI I K F+ IH ALPEI++D +D S FLGK L P+LISSM Sbjct: 11 RKQDHIEINLTKNVESTLKSGFESIQFIHNALPEINYDIIDTSTTFLGKYLQAPILISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN LA A+K +AM +GS RV+ + + I +F +R AP L++N+G Sbjct: 71 TGGTARA-RDINYRLAQVAQKAGIAMGLGSMRVLLTKPDTITTFAIRHIAPDIPLLANIG 129 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLNY ++ V V+ AD L LHLN LQE+ QP GN N+ +L +I L + + V Sbjct: 130 AVQLNYGVTPKECQYLVDVVKADALILHLNVLQELTQPEGNRNWENLLPRIQELVNYLSV 189 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDW 241 P+++KEVG GLS E +K G+ DIAG GGTSWS++E++R L++ I F W Sbjct: 190 PVVVKEVGYGLSKKVAESLIKVGVEVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFISW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT SL+M R IASGGL++G+D K+I +GAS+ GLA LK A S + V Sbjct: 250 GIPTLDSLKMVREVSGNIAIIASGGLKSGIDGAKAIRMGASIFGLAGQLLKAADISENLV 309 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 I+ + ++ ++M G++ +++L Sbjct: 310 SEEIQLIIEQLKITMICTGSRTLKDL 335 >gi|307153336|ref|YP_003888720.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7822] gi|306983564|gb|ADN15445.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7822] Length = 344 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 137/339 (40%), Positives = 196/339 (57%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +H+ VC +D + + H LPEI ++D FLGK L PL Sbjct: 7 IESRKAEHLR-VCLEEDVQFREVTSGLEQYRFTHCCLPEIDRRDIDLRTTFLGKSLGAPL 65 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ +N LA A+ ++AM VGSQR+ + +F +R AP +L Sbjct: 66 LISSMTGGT-ELARLVNTRLATVAQHYRLAMGVGSQRIALEQPHLAPTFAVRSLAPDILL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY G+++ V +L AD L LHLNPLQE +Q G+TNF L SKIA L Sbjct: 125 LANLGAVQLNYGCGLEECLHLVDLLEADVLILHLNPLQECVQTKGDTNFRGLLSKIAELC 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP+++KEVG G+S+ + +++G+ D+AG GGTSW+++ES R + +G Sbjct: 185 QKLPVPVMVKEVGNGISAPMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDKKQRRLGQ 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT + R IASGG++NG+D K++ LGA L GLA PFL+ A++ Sbjct: 245 TFADWGIPTAECITSIREIAPSIPLIASGGIKNGLDAAKALALGADLAGLARPFLEAAVE 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S AV +E L E ++ G + +L + AL R Sbjct: 305 SESAVEQLVEFLIAELETALLCTGNTTLSQLKSSGALQR 343 >gi|157964627|ref|YP_001499451.1| isopentenyl pyrophosphate isomerase [Rickettsia massiliae MTU5] gi|157844403|gb|ABV84904.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia massiliae MTU5] Length = 346 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 132/327 (40%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI+I + K F+ IH ALPEI++D ++ + FLGK L P+LISS Sbjct: 14 ERKRDHIDINLTKNVESKLKSGFESIQFIHNALPEINYDSINTTTTFLGKSLQAPILISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA A+K +AM +GS RV+ ++ + I +F +R AP L++N+ Sbjct: 74 MTGGTTRA-RDINYRLAQVAQKAGIAMGLGSMRVLLTEPDTITTFAVRHIAPDIPLLANI 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 133 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 192 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 193 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 252 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 253 WGIPTLDSLKMVRAVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 312 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 313 LSEEIQLIIEQLKITMLCTGSRTLKDL 339 >gi|307352922|ref|YP_003893973.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoplanus petrolearius DSM 11571] gi|307156155|gb|ADN35535.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoplanus petrolearius DSM 11571] Length = 350 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 138/331 (41%), Positives = 197/331 (59%), Gaps = 11/331 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++H+ I C I+ + F+D L+H +LPE S D +DP V FLG KL+ PL I Sbjct: 11 TSSRKLEHLKICCGGD-IEAGRSGFEDIRLVHNSLPECSMDGIDPGVRFLGHKLASPLFI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 S+MTGG+ E +NR L AAE+ + M VGSQR + SF +R+ AP L Sbjct: 70 SAMTGGHPDTTE-VNRRLGEAAERFNIGMGVGSQRAALENPELEGSFTAVREAAPMAFLC 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGAVQL + G + A +AV ++ A L +HLNPLQE +QP G+ + + IA L + Sbjct: 129 GNLGAVQLR-EKGSEWADRAVEMIDAQALCIHLNPLQEAVQPEGDHDSSGCLDAIAELCA 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 + P+++KE G G+S+ E G D G GGTSW+ +E+ R + +G Sbjct: 188 SSKYPVIVKETGAGISAEAAEKLWSVGAAAIDTGGLGGTSWAAVEALRGEDESLRQLGRD 247 Query: 238 FQDWGIPTPLSLEMARPYCNEAQ-FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +SL C + + IASGGLR+G+DI K++ LGASLGG+A P LKPAM+ Sbjct: 248 FSDWGIPTVVSL---IEVCGKGKPVIASGGLRSGIDIAKAVTLGASLGGMALPLLKPAME 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 SS+A+ I + +E ++M+L G++ L Sbjct: 305 SSEALFEKIRQIHEEIRIAMYLTGSESCGAL 335 >gi|222840493|gb|ACM68685.1| AerK [Microcystis aeruginosa NIES-98] Length = 347 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 199/336 (59%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK +H+ + KD + + + H LPE+ +++ FLGK L P+L Sbjct: 10 IENRKSEHLRVCIEKDVEFQQLTSGLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPIL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG ++ +N LA A++ +AM VGSQR+ +F +R AP +L+ Sbjct: 70 ISSMTGGT-ELAHLVNTRLATVAQRYGLAMGVGSQRIALEQPELAPTFAVRSLAPDILLL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + + Sbjct: 129 ANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQICA 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G V Sbjct: 189 QLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQV 248 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGL+NG+D+ KSI LGA LGGLA PFL A++S Sbjct: 249 FADWGLPTAECITAIRSMNSTIPLIASGGLKNGLDLAKSIALGADLGGLARPFLVAAIES 308 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV ++ L E + +F G + L + AL Sbjct: 309 EAAVDELVKFLIAELEIVLFCTGNPNLSTLKTSGAL 344 >gi|158337495|ref|YP_001518670.1| isopentenyl pyrophosphate isomerase [Acaryochloris marina MBIC11017] gi|158307736|gb|ABW29353.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acaryochloris marina MBIC11017] Length = 349 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/340 (40%), Positives = 203/340 (59%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK DH+ I C D + F+ + H LPE++ +++ S FLGK L PL Sbjct: 12 IKTRKADHLRI-CLDDKVQCKSITTGFEQYRFQHCCLPELALEDIQLSTTFLGKSLGAPL 70 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ + IN+ LAI A++ K+AM VGSQRV +F +R +AP L Sbjct: 71 LISSMTGGT-ELAKTINQRLAIVAQEFKIAMGVGSQRVAVEHPQVADTFAVRSHAPDIPL 129 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY + + +++ +L AD L LHLNPLQE IQ +G+TNF +L ++I L Sbjct: 130 FANLGAVQLNYGYNLDACRRSIDLLEADALILHLNPLQECIQSHGDTNFRNLFTQIGKLC 189 Query: 180 SAMDVPLLLKEVGCGLSS-MDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DL-ESDIG 235 + VP+++KEVG G+S+ + I L + G+ D+AG GGTSW+++E R D+ + +G Sbjct: 190 QQLPVPVIVKEVGNGISAPLAIRL-VDVGVAAIDVAGAGGTSWAKVEGERAEDIRQRRLG 248 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F DWG+PT + ++ IASGGLRNG+D K++ LGA + G+A PFL+ A Sbjct: 249 QTFSDWGLPTAECVASIFQANSKIPLIASGGLRNGLDAAKALALGADVAGMAYPFLQAAH 308 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +S A+ +E L E +F G + +L + L++ Sbjct: 309 ESEAALHTLMEMLIAELETVLFCTGNATITDLQASQCLLQ 348 >gi|126179757|ref|YP_001047722.1| isopentenyl pyrophosphate isomerase [Methanoculleus marisnigri JR1] gi|125862551|gb|ABN57740.1| isopentenyl-diphosphate delta-isomerase [Methanoculleus marisnigri JR1] Length = 350 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 134/330 (40%), Positives = 192/330 (58%), Gaps = 9/330 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH+ I C+ P ++ F D L+H ALPE D ++ FL + L PL I Sbjct: 7 TSSRKRDHLQICCEQP-VEAGNAGFGDVRLVHNALPECDMDAIETKTRFLDRALGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ +E +NR LA AAE+ + M VGSQR SF + R+ APH L Sbjct: 66 AAMTGGHPDTLE-VNRRLARAAERYNLGMGVGSQRAALEKPELEGSFTVVREEAPHAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG +QL D G++ A +AV ++ A + +H+N LQE IQP G+ N + L Sbjct: 125 ANLGIIQLR-DHGIEWAERAVEMIDAQAIAIHVNSLQEAIQPEGDHNAEGCIEALRDLCK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 P+++KE G G+S+ + +G DI G GGTSW++IE R S D+G Sbjct: 184 EFSYPVIVKETGSGISAGTARVIRGAGASAIDIGGYGGTSWAKIERLRASGSELADLGEA 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +SL R IA+GGLR+G+DI K++ LGA LGG+A P LKPAM+S Sbjct: 244 FLSWGIPTVVSLREVRTAGG--PIIATGGLRSGIDIAKAVALGADLGGMALPLLKPAMES 301 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DA+ A+E++ +E V+MFL G++ + +L Sbjct: 302 DDALSLAVEAMHRELRVAMFLTGSRSIADL 331 >gi|56292021|emb|CAI29176.1| isopentenyl-pyrophosphate isomerase [Trypanosoma brucei brucei] gi|261331428|emb|CBH14422.1| isomerase, putative [Trypanosoma brucei gambiense DAL972] Length = 356 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/343 (38%), Positives = 198/343 (57%), Gaps = 11/343 (3%) Query: 2 VNDRKIDHINIVCK---DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 V DRK DHINI K +P + +D + + + ALPEI+ +D F+G+ LSFP Sbjct: 13 VMDRKKDHINICLKRNVEP-YKNGRSIWDKYVVPYTALPEINMANIDTRCSFMGRSLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 +ISSMTGG + IN +LA A E + VGS RV+ A+ +F+++Q+ P Sbjct: 72 FIISSMTGGESHG-RTINMSLAQACEAEGIPFGVGSMRVVNRYPAAVHTFDVKQFCPSVQ 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G VQLNY FG ++ + + ADGLF+HLN QE QP G+TNF +L K+ +L Sbjct: 131 MFANIGLVQLNYGFGAADVNRLIECVKADGLFIHLNHTQEACQPEGDTNFENLLEKLKVL 190 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 + VP+++K VG G+ + ++G++Y D++G GGTSW+ IE R E ++ Sbjct: 191 LPQVKVPVIVKGVGHGIDYESVVALQRAGVKYIDVSGCGGTSWAWIEGRRHPYTVEEENL 250 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D G+ T L P + IA GG+R G+DI KS+++GA A PFLK Sbjct: 251 GFIFRDVGVTTDQCLTECAPLAKKGGLHLIAGGGIRTGLDIAKSLMMGAECATAALPFLK 310 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A++ +AV I+ LR+E +V+MF G K + L + +R Sbjct: 311 AALEGPEAVRKVIQRLRRELVVAMFACGVKDIASLRRKSLRLR 353 >gi|148656559|ref|YP_001276764.1| isopentenyl pyrophosphate isomerase [Roseiflexus sp. RS-1] gi|148568669|gb|ABQ90814.1| isopentenyl-diphosphate delta-isomerase, type 2 [Roseiflexus sp. RS-1] Length = 345 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 141/325 (43%), Positives = 189/325 (58%), Gaps = 9/325 (2%) Query: 3 NDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ IV +D F + L H A PE+ E+D SV FLGK++ PLLI Sbjct: 8 SSRKLDHVRIVLGEDVAAKGVTTGFAAYRLPHEAAPELDLAEIDTSVTFLGKRMRAPLLI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + RIN LA AAE +AM VGSQR D ++ +R AP L++ Sbjct: 68 SSMTGGARD-VARINVALAEAAEALGLAMGVGSQRAALVDPRLADTYRVRHVAPTIPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQLNY FGV + +AV ++ AD L LH N LQE +QP GNTNF L +I + Sbjct: 127 NLGAVQLNYGFGVDECRRAVDMIEADALVLHFNALQEAVQPEGNTNFKGLLRRIEEVCLR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVF 238 +DVP++ KEVG G+ + + +G++ D+AG GGTSWS +E +R + + F Sbjct: 187 LDVPVIAKEVGNGIGAATARRLVDAGVKIIDVAGAGGTSWSEVERYRHTTGRGAQVAGAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT ++ R + I SGG+R+GVD+ K+I LGA L A P L PA+D Sbjct: 247 AGWGIPTTEAIRQVRAALPDITIIGSGGVRSGVDVAKAIALGADLAATARPALIPAVDER 306 Query: 299 DAVVAAIESLRK---EFIVSMFLLG 320 A VA IESL+ E ++MF G Sbjct: 307 GA-VAVIESLQTYIDELRIAMFCTG 330 >gi|71745166|ref|XP_827213.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma brucei TREU927] gi|70831378|gb|EAN76883.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma brucei] Length = 356 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 11/343 (3%) Query: 2 VNDRKIDHINIVCK---DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 V DRK DHINI K +P + +D + + + ALPEI+ +D F+G+ LSFP Sbjct: 13 VMDRKKDHINICLKRNVEP-YKNGRSIWDKYVVPYTALPEINMANIDTRCSFMGRSLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 +ISSMTGG + IN +LA A E + VGS RV+ A+ +F+++Q+ P Sbjct: 72 FIISSMTGGESHG-RTINMSLAQACEAEGIPFGVGSMRVVNRYPAAVHTFDVKQFCPSVQ 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G VQLNY FG ++ + + ADGLF+HLN QE QP G+TNF +L K+ L Sbjct: 131 MFANIGLVQLNYGFGAADVNRLIECVKADGLFIHLNHTQEACQPEGDTNFENLLEKLKAL 190 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 + VP+++K VG G+ + ++G++Y D++G GGTSW+ IE R E ++ Sbjct: 191 LPQVKVPVIVKGVGHGIDYESVVALQRAGVKYIDVSGCGGTSWAWIEGRRHPYTVEEENL 250 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D G+ T L P + IA GG+R G+DI KS+++GA A PFLK Sbjct: 251 GFIFRDVGVTTDQCLTECAPLAKKGGLHLIAGGGIRTGLDIAKSLMMGAECATAALPFLK 310 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A++ +AV I+ LR+E +V+MF G K + L + +R Sbjct: 311 AALEGPEAVRKVIQRLRRELVVAMFACGVKDIASLRRKSLRLR 353 >gi|255513578|gb|EET89844.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 375 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 134/335 (40%), Positives = 205/335 (61%), Gaps = 10/335 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ RK +HI I P RN + F D L++ ++PEI FD++D SV FLGK+ S P Sbjct: 20 LIMKRKEEHIRICLDKPVQARNVRTLFSDVKLMNDSMPEIDFDDIDTSVSFLGKRFSAPF 79 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 ++ +MTGG +M +RIN N+A A E+ + MAVGSQR D ++ + R+ PH Sbjct: 80 MVGAMTGGA-EMAKRINANIASAVEELGLGMAVGSQRAALYDKILEDTYTIARKNGPHIF 138 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G QL+ ++ + V +L AD L++HLNP QEI+QP G + ++ S+I + Sbjct: 139 IGANIGGAQLSEGMDLKSIRKLVEMLKADALYVHLNPTQEIVQPEGEPKYRNVLSRIREI 198 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 +D P++ KEVG G+S + K+G++ ++AG GGTS++ +E +R + ++ Sbjct: 199 VEGIDRPVIAKEVGFGISPKVAKELEKAGVKAIEVAGMGGTSYAAVEWYRAKAFKMNDKA 258 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 D+G +F DWGIPT SL MA + ++SGGLR G+DI KSI LGAS+ +A P L+ Sbjct: 259 DLGNLFWDWGIPTAASLYMATRSV-KLPVVSSGGLRTGLDIAKSIALGASMTAMALPVLR 317 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PA S+DAV IE + E +MFLLG K +++L Sbjct: 318 PATVSADAVKDFIERILLELKSTMFLLGAKNIEQL 352 >gi|166368398|ref|YP_001660671.1| isopentenyl pyrophosphate isomerase [Microcystis aeruginosa NIES-843] gi|166090771|dbj|BAG05479.1| isopentenyl-dephosphate delta-isomerase [Microcystis aeruginosa NIES-843] Length = 347 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 133/337 (39%), Positives = 201/337 (59%), Gaps = 7/337 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFD--DWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK +H+ VC + ++ + D + H LPE+ +++ FLGK L P+ Sbjct: 10 IENRKSEHLR-VCIEEDVEFQQLTSDLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPI 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ +N LA A++ +AM VGSQR+ +F +R AP +L Sbjct: 69 LISSMTGGT-ELAHLVNTRLATVAQRYGLAMGVGSQRIALEQPELAPTFAVRSLAPDILL 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + Sbjct: 128 LANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQIC 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G Sbjct: 188 AQLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQ 247 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 VF DWG+PT + R + IASGGL+NG+D+ KSI LGA LGGLA PFL A++ Sbjct: 248 VFADWGLPTAECITAIRSMNSTIPLIASGGLKNGLDLAKSIALGADLGGLARPFLVAAIE 307 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S AV ++ L E + +F G + L + AL Sbjct: 308 SEAAVDELVKFLIAELEIVLFCTGNPNLSALKNSGAL 344 >gi|90415698|ref|ZP_01223632.1| isopentenyl pyrophosphate isomerase [marine gamma proteobacterium HTCC2207] gi|90333021|gb|EAS48191.1| isopentenyl pyrophosphate isomerase [marine gamma proteobacterium HTCC2207] Length = 335 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 132/329 (40%), Positives = 198/329 (60%), Gaps = 8/329 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHIN+ + FD H ALPE+ EVD S FL + S PL+I Sbjct: 4 ISQRKADHINLALQAEHQGALSAGFDRIQFEHNALPELLVSEVDCSAIFLNQYCSAPLII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG E INR+LA AAE+ ++ MAVGSQR D A ++R++AP +L+ Sbjct: 64 GAMTGGCEHG-ESINRHLAEAAEQAQIPMAVGSQRAALQDGLA---QDVRRWAPKAILLG 119 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL GV+ A +AV + A+ + +HLNPLQE++QP+G+ ++ + + I + Sbjct: 120 NLGGTQLQ-QHGVELAQRAVDSIEANAMIIHLNPLQELVQPDGDRDWRGVLAAIEECCAT 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP+++KEVG G+ + + G+ + +IAGRGGTSW+ IES R E I F Sbjct: 179 LSVPVIIKEVGSGIGPSSAQRLIDVGVSWIEIAGRGGTSWASIESARIQQTREQQIAAPF 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+ T + R ++ IASGGLR+G+DI +S+ LGA++ +A PFL+PA++S+ Sbjct: 239 IDWGMDTAQLIPQVRSQSSQLGLIASGGLRDGLDIARSLRLGANMSAMAQPFLQPALEST 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DAV+ IE R++ +MFL G+ ++ L Sbjct: 299 DAVIEKIEIFREQLRWAMFLTGSANLKRL 327 >gi|84489656|ref|YP_447888.1| isopentenyl pyrophosphate isomerase [Methanosphaera stadtmanae DSM 3091] gi|84372975|gb|ABC57245.1| isopentenyl-diphosphate delta-isomerase [Methanosphaera stadtmanae DSM 3091] Length = 349 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 200/330 (60%), Gaps = 13/330 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I CK+ I+ + F+D L+H +LPE++++E+D S+E GKKLS PL Sbjct: 1 MISDRKLEHLEI-CKNKDIEHHITTGFEDIQLVHTSLPEVNYEEIDTSIELFGKKLSSPL 59 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +IS++TGG+ ++IN LAIA E T + M VGSQR ++ +F + R APH + Sbjct: 60 IISAITGGHPSS-KKINEKLAIATENTNIGMGVGSQRAGITNPELTDTFTVVRDNAPHAL 118 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I N+GA Q+ Y A +A+ +L D L +HLNPLQEIIQP G+ + I + Sbjct: 119 IIGNIGAPQVEY------APKAIEMLNTDALAIHLNPLQEIIQPEGDVDAKGYVEDIKAI 172 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S ++P++ KE G G+ D ++ K G+ DI G GGTSW+ +E++R D+G +F Sbjct: 173 CSNTNIPIIAKETGAGIGMEDAKILEKIGVDAIDIQGVGGTSWAAVETYRAENPDLGNLF 232 Query: 239 QDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 DWGI T +S +E+ + I+SGG+RNG++ K+I LG+ G+A PFLK A Sbjct: 233 WDWGITTAVSTVEVLE--STKIPVISSGGIRNGLEAAKAIALGSECVGMALPFLKHAYLG 290 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V I E +MFL+G ++EL Sbjct: 291 HNYVEEKINQFTHELKTAMFLVGASNIEEL 320 >gi|56292023|emb|CAI29177.1| isopentenyl-pyrophosphate isomerase [Trypanosoma cruzi] Length = 356 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 134/336 (39%), Positives = 200/336 (59%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 +V RK DHI+I C ++ K ++ + + + ALPEIS ++D EF+G LSF Sbjct: 12 IVRRRKKDHIDI-CLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSF 70 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL+ISSMTGG IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 71 PLIISSMTGGEEHG-RIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSV 129 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TNF L K+ Sbjct: 130 PMFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTNFESLLHKLEE 189 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES--HRDLESD-- 233 L + VP+++K VG G+ + + G++Y D++G GGTSW+ IE H DL D Sbjct: 190 LLPHIKVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIEGWRHPDLPDDQN 249 Query: 234 IGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G +F+D GI T SL+ P ++ + IA GG+R G+DI KS+++GA A PFL Sbjct: 250 LGYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDIAKSLMMGAECATAALPFL 309 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K A++S + V I+ +KE IV+MF G ++EL Sbjct: 310 KAALESPERVRGVIQRFKKELIVAMFACGASTIEEL 345 >gi|312137120|ref|YP_004004457.1| isopentenyl-diphosphate delta-isomerase [Methanothermus fervidus DSM 2088] gi|311224839|gb|ADP77695.1| isopentenyl-diphosphate delta-isomerase [Methanothermus fervidus DSM 2088] Length = 359 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 135/337 (40%), Positives = 204/337 (60%), Gaps = 11/337 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKF-FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + ++RK++H+ I+C ++ KK F D LIHRALPEI+ DE+D SV FLGKKL P Sbjct: 7 LTSNRKLEHL-ILCLCRDVEHKKKSGFQDIELIHRALPEINKDEIDISVNFLGKKLESPF 65 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +I+ +TGG+ ++ +IN+ LA AA+ T VA+ +GSQRV + ++ + R+ A Sbjct: 66 MITGITGGH-EISYKINKELAKAAKATGVALGLGSQRVAIENPELEYTYTIVREVAEDAF 124 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I N+G + Y A +AV ++ AD L +HLNPLQE IQP G T+ KI + Sbjct: 125 IIGNIGVSHVKY------AKKAVEMVDADALAIHLNPLQEAIQPEGITHSKKTLEKIGKI 178 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +DVP+++KE G G+ D +L G+ D+AG GGTSWS +E++R S +G ++ Sbjct: 179 VKELDVPVIVKETGAGICYEDAKLLKNKGVAAIDVAGAGGTSWSAVEAYRSKNSHLGKLY 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +S R + IASGG+R G+D K+I LGA + G+A P +K A Sbjct: 239 WDWGIPTAISTVEVREAVD-IPVIASGGIRTGLDAAKAIALGADIVGMALPIMKKAFFGY 297 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V++ IE+ +E ++M+L+G K ++EL +IR Sbjct: 298 KEVISFIENFNEELKIAMYLVGAKNIEELKKCPLVIR 334 >gi|159030050|emb|CAO90432.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/337 (38%), Positives = 199/337 (59%), Gaps = 7/337 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK +H+ VC + ++ + + + H LPE+ +++ FLGK L P+ Sbjct: 10 IENRKSEHLR-VCIEEDVEFQQLTNGLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPI 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG ++ +N LA A++ + M VGSQR+ +F +R AP +L Sbjct: 69 LISSMTGGT-ELAHLVNTRLATVAQRYGLGMGVGSQRIALEQPELAPTFAVRSLAPDILL 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + Sbjct: 128 LANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQIC 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G Sbjct: 188 VQLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQ 247 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 VF DWG+PT + R + IASGGL+NG+DI KS+ LGA LGGLA PFL A++ Sbjct: 248 VFADWGLPTAECITAIRSLNSTIPLIASGGLKNGLDIAKSVALGADLGGLARPFLVAAIE 307 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S AV ++ L E + +F G + L + AL Sbjct: 308 SEAAVDELVKFLIAELEIVLFCTGNPNLSALKHSGAL 344 >gi|22298946|ref|NP_682193.1| isopentenyl pyrophosphate isomerase [Thermosynechococcus elongatus BP-1] gi|32129627|sp|Q8DJ26|IDI2_THEEB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|22295127|dbj|BAC08955.1| isopentenyl-diphosphate delta-isomerase [Thermosynechococcus elongatus BP-1] Length = 351 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 140/339 (41%), Positives = 203/339 (59%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +H+ + C ++ + F+ + H ALPE+ F E+D VEFLG +L+ PL Sbjct: 14 IEQRKAEHLKL-CLQGDVNHQEITTGFEKYRFRHCALPELDFAEIDLRVEFLGWRLAAPL 72 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + E INR LA A++ + M VGSQRV+ +F +R+ AP L Sbjct: 73 LISSMTGGTPQAGE-INRRLARVAQQKGIVMGVGSQRVLLEHPEVATTFAIRREAPTIPL 131 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGAVQLNY GV + + V +L A+ L LHLNPLQE +Q G+ NF L +KI +L Sbjct: 132 LANLGAVQLNYGCGVSECQKIVDLLEANALILHLNPLQEAVQTGGDRNFKGLLTKIGVLC 191 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGI 236 A+ VP+++KEVG G+S+ + + G+ D+AG GGTSW+++E+ R ++ +G Sbjct: 192 RALPVPVIVKEVGNGISAEVAKQLVDVGVAAIDVAGAGGTSWAKVEAARAQDASQRYLGD 251 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGIPT LE + IASGGL++G+D+ K++ LGA L GLA PFL+ A Sbjct: 252 AFAEWGIPTAHCLEQVHTALPDTPLIASGGLKDGIDVAKALALGAGLAGLARPFLQAAHQ 311 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S +A+ I+ L +E +F G+ Q LY L R Sbjct: 312 SEEALAQRIDLLLEELKTVLFCTGSATPQALYQRRCLER 350 >gi|322819252|gb|EFZ26432.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 356 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 200/336 (59%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 +V RK DHI+I C ++ K ++ + + + ALPEIS ++D EF+G LSF Sbjct: 12 IVRRRKKDHIDI-CLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSF 70 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 P +ISSMTGG IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 71 PFIISSMTGGEEHG-RIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSV 129 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TNF L K+ Sbjct: 130 PMFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTNFESLLHKLEE 189 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES--HRDLESD-- 233 L ++VP+++K VG G+ + + G++Y D++G GGTSW+ IE H DL D Sbjct: 190 LLPHINVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIEGWRHPDLPDDQN 249 Query: 234 IGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G +F+D GI T SL+ P ++ + IA GG+R G+D+ KS+++GA A PFL Sbjct: 250 LGYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDVAKSLMMGAECATAALPFL 309 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K A++S + V I+ +KE IV+MF G ++EL Sbjct: 310 KAALESPERVRGVIQRFKKELIVAMFACGASTIEEL 345 >gi|269839078|ref|YP_003323770.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermobaculum terrenum ATCC BAA-798] gi|269790808|gb|ACZ42948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermobaculum terrenum ATCC BAA-798] Length = 349 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 189/329 (57%), Gaps = 9/329 (2%) Query: 5 RKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK + V G D R + FD L HRALPEIS EV FLG++L PLLIS Sbjct: 10 RKDRQLQAVLDSAGDDGRLEGGFDALRLPHRALPEISLSEVSTRTVFLGRELGAPLLISC 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 TGG + E I R LA AA+ ++A +GSQRVM A + F++R AP ++SNL Sbjct: 70 TTGGTPRTYEIIAR-LARAAQVRRLAFGLGSQRVMLEFPEAARFFQVRALAPDVPILSNL 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY V + V + +D L LHLNPLQE +Q GNTNF+ L KI L + Sbjct: 129 GAVQLNYGVTVDDCRRLVELSESDALVLHLNPLQEALQEGGNTNFSGLLGKIEALCRQLP 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD-----IGIVF 238 VP++ KE+G G+S + +G+ D+AG GGTSWS+IES L S +G F Sbjct: 189 VPVIAKEIGYGISGEVARQLVDAGVWGIDVAGAGGTSWSQIESK--LASSPRGRMVGRAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT ++ R + IASGGLR+GVD+ K+I LGA + G+A P +K A S Sbjct: 247 AAWGIPTSRAVVSVRRALPQVPLIASGGLRDGVDVAKAIALGADMAGIAGPLVKAAAASE 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A++ +++L ++ V+MF G V L Sbjct: 307 EALMEYVDALVQQLRVAMFCTGAADVSSL 335 >gi|150248255|gb|ABR67590.1| type 2 isopentenyl diphosphate isomerase [Pyrococcus furiosus DSM 3638] Length = 374 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 202/334 (60%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SV+FLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRNVEAHATNGFEDVHFVHMSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 69 Query: 65 TGGNNK--MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K + +INR LA AAE+ + + VGSQR M +S+ +R AP+ L+ N Sbjct: 70 TGGTRKGEVAWKINRTLAQAAEELNIPLGVGSQRAMIEKPETWESYYVRDVAPNVFLVGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++ A+ + AD + +H+NPLQE +QP G+T F+ + +A + Sbjct: 130 LGAPQFGRNAKRKYGVKEVLYAIEKIDADAIAIHMNPLQESVQPEGDTTFSGVLEALAEI 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 +S++D P++ KE G G+S ++ + L+S G+ DI+G GGTSWS +E +R +L + Sbjct: 190 TSSIDYPVIAKETGAGVSK-EVAIKLESIGVSAIDISGVGGTSWSGVEYYRAKDELGKRL 248 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +SL R + IASGG+R+G+ + K++ +GASL G+A P LKPA Sbjct: 249 ALRFWDWGIKTAISLAEVR-FSTNLPIIASGGMRDGITMAKALAMGASLVGIALPVLKPA 307 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ I+ +E +MFL+G + V+EL Sbjct: 308 AKGDVEGVIKVIKGYVEEIKNAMFLVGARNVEEL 341 >gi|18977228|ref|NP_578585.1| isopentenyl pyrophosphate isomerase [Pyrococcus furiosus DSM 3638] gi|32129641|sp|Q8U2H9|IDI2_PYRFU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|18892889|gb|AAL80980.1| hypothetical protein PF0856 [Pyrococcus furiosus DSM 3638] Length = 394 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 202/334 (60%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SV+FLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRNVEAHATNGFEDVHFVHMSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 69 Query: 65 TGGNNK--MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K + +INR LA AAE+ + + VGSQR M +S+ +R AP+ L+ N Sbjct: 70 TGGTRKGEVAWKINRTLAQAAEELNIPLGVGSQRAMIEKPETWESYYVRDVAPNVFLVGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++ A+ + AD + +H+NPLQE +QP G+T F+ + +A + Sbjct: 130 LGAPQFGRNAKRKYGVKEVLYAIEKIDADAIAIHMNPLQESVQPEGDTTFSGVLEALAEI 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 +S++D P++ KE G G+S ++ + L+S G+ DI+G GGTSWS +E +R +L + Sbjct: 190 TSSIDYPVIAKETGAGVSK-EVAIKLESIGVSAIDISGVGGTSWSGVEYYRAKDELGKRL 248 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +SL R + IASGG+R+G+ + K++ +GASL G+A P LKPA Sbjct: 249 ALRFWDWGIKTAISLAEVR-FSTNLPIIASGGMRDGITMAKALAMGASLVGIALPVLKPA 307 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ I+ +E +MFL+G + V+EL Sbjct: 308 AKGDVEGVIKVIKGYVEEIKNAMFLVGARNVEEL 341 >gi|119476626|ref|ZP_01616936.1| isopentenyl-diphosphate delta-isomerase, type 2 [marine gamma proteobacterium HTCC2143] gi|119449882|gb|EAW31118.1| isopentenyl-diphosphate delta-isomerase, type 2 [marine gamma proteobacterium HTCC2143] Length = 334 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 133/329 (40%), Positives = 197/329 (59%), Gaps = 8/329 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++DRK DHI + FD HR LPE++ ++D S +FLGK S P +I Sbjct: 4 ISDRKDDHIQLALTSDHQSLPGGSFDRVSFEHRGLPELALSDIDISGDFLGKLTSAPFII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + ERIN++LA AAE+ + MA+GSQR A K +R +AP+ ++ Sbjct: 64 GAMTGGCDNG-ERINQHLAEAAEQCHIPMALGSQRAALEQGLAQK---VRTWAPNATILG 119 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA QL GV+ A +AV + A+ L +HLNPLQE+IQP+G+ ++ D+ I ++ Sbjct: 120 NLGATQLRQS-GVELAKRAVDSVAANALVIHLNPLQELIQPDGDRDWNDVLEAIQNCANQ 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVF 238 + VP+++KEVG G+ + + +G+++ ++AGRGGTSW+ IE R+ S I F Sbjct: 179 LPVPIIVKEVGAGIGPITARQLVDAGVQWIELAGRGGTSWASIELARNSSSRARQIAAPF 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+ T L R C + I SGG+RNGVD+ K I LGA + LA PFL PA++SS Sbjct: 239 IDWGMDTTELLVSVRSACADVNLIGSGGVRNGVDMAKCIRLGAQMSALAQPFLAPALESS 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 AV+ IE L+++ ++FL +K + L Sbjct: 299 AAVIEKIEILQEQLRWTLFLTASKNLGAL 327 >gi|78483930|dbj|BAE47464.1| IPP isomerase [Paracoccus sp. N81106] gi|197085497|dbj|BAG68683.1| isopentenyl pyrophosphate isomerase [synthetic construct] Length = 360 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 136/331 (41%), Positives = 196/331 (59%), Gaps = 6/331 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+ IV + G DR FD +H+ALP++ D VD FLG+ L PLL Sbjct: 4 ISRRKSDHLRIVTEGRGAQDRLDSGFDQVRFLHQALPDLDMDAVDTGTRFLGRSLGAPLL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVL 119 IS+MTGG + ERIN ++A A ++A++VGSQR+ + N LR AP + Sbjct: 64 ISAMTGGPEEA-ERINLHIAEACAHHRIALSVGSQRIAVEAGGNGGLGASLRARAPQIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+GAVQLNY FGV +A +AV ++ AD L LHLNPLQE IQ G+ NFA L +I L+ Sbjct: 123 LGNIGAVQLNYGFGVAQAQRAVDMIQADALILHLNPLQEAIQEGGDRNFAALLPRIEELA 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIV 237 +++ VPL +KEVG GLS+ + +G+ D+AG GGTSW+R+E+ R D + Sbjct: 183 TSLPVPLGVKEVGAGLSAPVARCLIDAGVTILDVAGAGGTSWARVEAERGPDRLQALAAP 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQ-FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT SL P + + SGG+R+G+D ++I LGA L G A+ L A Sbjct: 243 FHDWGIPTTASLRAIAPMMGPDRILVGSGGVRHGLDAARAIRLGADLVGQAARALPAARH 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++A+ + + + ++MF G+ + L Sbjct: 303 SAEALSDHLSDVVTQLRIAMFCTGSGDLAAL 333 >gi|51473641|ref|YP_067398.1| isopentenyl pyrophosphate isomerase [Rickettsia typhi str. Wilmington] gi|81610792|sp|Q68WS6|IDI2_RICTY RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51459953|gb|AAU03916.1| IPP isomerase [Rickettsia typhi str. Wilmington] Length = 342 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 130/327 (39%), Positives = 197/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K K IH ALPEI++D +D + FLGK + P+LISS Sbjct: 10 ERKQDHIEINLKQNVNSTLKSGLASIKFIHNALPEINYDNIDTTTTFLGKYMKAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K+ +AM +GS R++ + + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-KDINYRLAQAAQKSGIAMGLGSMRILLTKPDTIKTFTVRHVAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ + + AD L LHLN L E+ QP GN N+ +L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLIDTIKADALILHLNVLHELTQPEGNRNWENLLPKIKEVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + +K G++ DIAG GGTSWS++E++R +++ I F + Sbjct: 189 VPVIIKEVGYGLSKQVAKKLIKVGVKVLDIAGSGGTSWSQVEAYRAKNSMQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T SL+M R + IASGGL++G+D K+I +GA++ GLA LK A + Sbjct: 249 WGITTLDSLKMLREVSKDITLIASGGLQSGIDGAKAIRMGANIFGLAGQLLKAADIAESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V I+ + ++ ++M G+ +++L Sbjct: 309 VSEEIQLIIEQLKITMLCTGSCTLKDL 335 >gi|116753787|ref|YP_842905.1| isopentenyl pyrophosphate isomerase [Methanosaeta thermophila PT] gi|121693256|sp|A0B6E1|IDI2_METTP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116665238|gb|ABK14265.1| isopentenyl-diphosphate delta-isomerase [Methanosaeta thermophila PT] Length = 357 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 140/338 (41%), Positives = 208/338 (61%), Gaps = 16/338 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI I K + + + F DD L+HRALPEI +V FL ++LS PL+IS+M Sbjct: 6 RKLEHIEICLKKEVVSKYRPF-DDLILLHRALPEIDESDVCTECTFLNRRLSAPLIISAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ E IN NLA AA++T +A+ VGSQR + +F + R+ AP +I N+ Sbjct: 65 TGGHPDARE-INANLATAAQETGIAIGVGSQRAALEHPDLEDTFSVVRELAPDVPVIGNI 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQL + +G + + ++ AD + +HLN LQE +QP G + A + +L + Sbjct: 124 GAVQL-HRYGPEVLDRVAEMVDADAVAVHLNFLQESVQPEGERHAAGVLG--SLREARFR 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLES-DIGIV 237 +P+++KE GCG+ D + + SGI+ D+AG GGTSWS +ES+R D ES +IG++ Sbjct: 181 LPIIIKETGCGIPFEDARMLVDSGIQLIDVAGTGGTSWSMVESYRAELRGDPESKEIGML 240 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGIPTP+S +E +R AQ I+SGG+R+G+D+ +SI LGA + G A P L PA Sbjct: 241 FAEWGIPTPVSVIECSRAG---AQVISSGGVRSGIDVARSIALGAFMAGAALPLLAPATR 297 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 S VV ++ +E +SMFL G++ +QEL +I Sbjct: 298 GSVDVVRVLQRFVRELRISMFLTGSRSLQELSRAPVII 335 >gi|332796337|ref|YP_004457837.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidianus hospitalis W1] gi|332694072|gb|AEE93539.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidianus hospitalis W1] Length = 365 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 129/335 (38%), Positives = 209/335 (62%), Gaps = 10/335 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++H+ I + FDD LIH+A+P +SF+E++ +V+FL K++S PL+ Sbjct: 1 MITNRKLEHVEICLYEDIEGYIPTLFDDVVLIHQAMPCLSFNEINTNVKFLNKEISAPLM 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 ++ MTGGN + +IN +A E+ ++AM VGSQR+ +A +SF++ R+ AP + + Sbjct: 61 VTGMTGGNEAL-GKINATIAEVIEELRLAMGVGSQRIAIERADARESFKIVRKKAPTSPI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSKIALL 178 I+N+GA QL +G+++ +AV ++ AD + +HLNP QE+ QP G + +D+ K+ + Sbjct: 120 IANIGAPQLAKGYGLKELKEAVSMIEADAIAVHLNPAQELFQPEGEPEYPSDILIKLRDI 179 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRD-----LES 232 S + VP+++KE G G+S M+ K GI+YFD++G+GGTSW +E RD + Sbjct: 180 SKELGVPIIIKETGTGIS-METATKFKEIGIKYFDVSGQGGTSWIAVEMVRDKRKNNWKK 238 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + +F WGIPT S+ R +A I SGG+RNG+ I K+I LGA + G+ASP LK Sbjct: 239 ESAELFAGWGIPTAASIIETRFAVPDAFIIGSGGIRNGLQIAKAIALGADIAGMASPVLK 298 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++ +++V+ + E +M L G K V+EL Sbjct: 299 KAVEGKESLVSFFNKVIFELKAAMMLTGAKNVEEL 333 >gi|315229909|ref|YP_004070345.1| isopentenyl-diphosphate delta-isomerase [Thermococcus barophilus MP] gi|315182937|gb|ADT83122.1| isopentenyl-diphosphate delta-isomerase [Thermococcus barophilus MP] Length = 373 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 201/334 (60%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F++ H +H +LPEI DE+D SVEFLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRQVEAHVTNQFENIHFVHTSLPEIDKDEIDLSVEFLGRKFDYPIMIAGM 69 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M + +S+ +R AP LI N Sbjct: 70 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRNPETWESYYVRDVAPDIFLIGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 130 LGAPQFAETMPDRYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGILKALAEL 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 S P++ KE G G+ SM++ + L+S GI D+ G GGTSWS +E +R + ++ Sbjct: 190 KSEFPYPIIAKETGAGV-SMEVAIKLESIGIDAVDVGGLGGTSWSGVEYYRAKDERSRNL 248 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPT +S+ + Y + IA+GG+R+G+ I K++ LGA+L G+A P LKPA Sbjct: 249 ALKFWDWGIPTAISVVEVK-YATDLPIIATGGIRDGIMIAKALALGANLAGVALPLLKPA 307 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ ++ E +MFL+G + V+EL Sbjct: 308 VKGDVEGVIRVLQRYIDELRNAMFLVGARDVEEL 341 >gi|289581614|ref|YP_003480080.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natrialba magadii ATCC 43099] gi|289531167|gb|ADD05518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natrialba magadii ATCC 43099] Length = 372 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 138/337 (40%), Positives = 204/337 (60%), Gaps = 18/337 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +DRK DHI I+ ++ ++ F D L+H ALPEI DE+D ++E G +L+ P++I Sbjct: 21 TSDRKDDHIRII-EEEDVETAGTGFADIDLVHEALPEIHRDEIDTTIELFGHELAAPIVI 79 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTV 118 SMTGG+ +INR LA AA++ +AM VGSQR + D + ++S+ + R AP Sbjct: 80 ESMTGGHPNTT-KINRALAEAAQEMNIAMGVGSQRAGIELDDEDLLESYTVVRDVAPDAF 138 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L N+GA QL ++ V+ AV ++ AD + +HLN LQE +QP G+ + ++I + Sbjct: 139 LYGNVGAAQL-LEYDVEDVEAAVEMIDADAMAIHLNFLQEAVQPEGDIDARGCLAEIGHV 197 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 +S + VP+++KE G G+S +G+ D+AG+GGT+WS IES+R + Sbjct: 198 ASDLSVPVVVKETGNGISRETASRLTDAGVDAIDVAGQGGTTWSGIESYRAAAVGASRQE 257 Query: 233 DIGIVFQDWGIPTPLS-LEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IG +F+ WG+PT +S LE A + C IASGG+R+G+DI K+I LGA GGLA PF Sbjct: 258 KIGQLFRAWGVPTAVSTLESAAVHDC----VIASGGVRSGLDIAKAIALGARAGGLAKPF 313 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PA +DAVV IE L E +MF+ G+ V +L Sbjct: 314 LGPAGQGTDAVVDLIEQLELELRTAMFVTGSASVADL 350 >gi|154151750|ref|YP_001405368.1| isopentenyl pyrophosphate isomerase [Candidatus Methanoregula boonei 6A8] gi|166226200|sp|A7IAG4|IDI2_METB6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154000302|gb|ABS56725.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoregula boonei 6A8] Length = 359 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 133/335 (39%), Positives = 193/335 (57%), Gaps = 14/335 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ I C + ++ F D L+H ALPE +D S FLG LS PL + Sbjct: 9 TSSRKLDHLRI-CAEEEVESGDAGFGDVRLVHHALPECDMRSIDLSTRFLGHTLSSPLFV 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ + N LA AE+ + M VGSQR + +F + R APH L+ Sbjct: 68 SAMTGGHPGTKD-ANARLARIAERFGLGMGVGSQRAALENPALADTFSVVRDEAPHAFLV 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQL + G A QA+ ++GA+ + +HLN LQE IQP G+ + + IA L + Sbjct: 127 ANLGAVQLR-EHGAAWAGQAIEMIGANAIAIHLNFLQEAIQPEGDLSATGCIAAIADLCA 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------- 233 +P+++KE GCG+S L +G DI G GGTSW+ +ES R D Sbjct: 186 ETKIPVIVKETGCGISREVARLCWSAGAAAIDIGGWGGTSWAAVESFRADRKDAQGRALK 245 Query: 234 -IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G F WGIPT +SL A + IASGG+R+G+D+ K + LGA L G+A P LK Sbjct: 246 TLGEDFAGWGIPTVVSL--AEVAGTGSPVIASGGIRSGIDMAKCLALGADLCGMALPLLK 303 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PA++S +A+ A +E++ +E + SMFL G R++++ Sbjct: 304 PALESDEALAARVETIHRELVASMFLCGAARIRDM 338 >gi|212223281|ref|YP_002306517.1| isopentenyl pyrophosphate isomerase [Thermococcus onnurineus NA1] gi|226707323|sp|B6YST3|IDI2_THEON RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|212008238|gb|ACJ15620.1| isopentenyl-diphosphate delta-isomerase [Thermococcus onnurineus NA1] Length = 374 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/334 (38%), Positives = 200/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P++I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIMIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ +IN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGKINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFAETMPDRYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + P++ KE G G+ SM++ + L+S GI D+ G GGTSWS +E +R +L ++ Sbjct: 193 KAEFPYPIIAKETGAGV-SMEVAIRLESIGIDAIDVGGLGGTSWSGVEYYRAKDELGRNL 251 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P L+PA Sbjct: 252 ALKFWDWGIKTAISVAEVR-YATELPIIATGGMRDGIAMAKALAMGATFAGVALPLLRPA 310 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ +E +E +MFL+G + V+EL Sbjct: 311 VKGDVEGVIKVLERYIEEIRNTMFLVGARNVEEL 344 >gi|297565922|ref|YP_003684894.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus silvanus DSM 9946] gi|296850371|gb|ADH63386.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus silvanus DSM 9946] Length = 338 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 133/326 (40%), Positives = 191/326 (58%), Gaps = 3/326 (0%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + P R + + L +RALPE++ +EVD S EFLGKKL P L Sbjct: 5 IPERKRKHLEVCLSFPVEFARMSTGLERYRLRYRALPELALEEVDLSTEFLGKKLRAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG K RINR LA AAE+ V M +GSQRVM + A+ SF++R+ AP +L+ Sbjct: 65 IGAMTGGEEKG-GRINRALAQAAERLGVGMMLGSQRVMLENPQALPSFQVREVAPSALLV 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQLN +G QA+ ++GAD L LH NPLQE Q +G+T+F+ L K+ + Sbjct: 124 GNLGLVQLNKGYGPGHLEQALSLVGADALALHTNPLQEAAQ-HGDTDFSGLLGKLEAILP 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D P+LLKEVG G+ + I D+AG GGTSW+++E + + + Sbjct: 183 RLDFPVLLKEVGHGIGREVAQQLQGLPITALDVAGAGGTSWAKVEQYVRYGRVLHPELVE 242 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L R +ASGG+R+G D K++ LGA + +A P L+PA++ +A Sbjct: 243 MGLPTAQALTECREVLPRLPLVASGGIRSGSDAAKALALGARVVAVARPLLRPALEGPEA 302 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 V A IE E V++F LG +R +E Sbjct: 303 VAAWIEDFLWELRVALFALGARRPEE 328 >gi|15604317|ref|NP_220833.1| isopentenyl pyrophosphate isomerase [Rickettsia prowazekii str. Madrid E] gi|13878570|sp|Q9ZD90|IDI2_RICPR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|3861009|emb|CAA14909.1| unknown [Rickettsia prowazekii] gi|292572067|gb|ADE29982.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia prowazekii Rp22] Length = 342 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 128/327 (39%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI I K K + IH ALPEI++D +D + FLGK + P+LISS Sbjct: 10 ERKQEHIEINLKQNVNSTLKSGLESIKFIHNALPEINYDSIDTTTTFLGKDMKAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA AA+K+ +AM +GS R++ + + IK+F +R AP L++N+ Sbjct: 70 MTGGTARA-RDINYRLAQAAQKSGIAMGLGSMRILLTKPDTIKTFTVRHVAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ + + AD L LHLN L E+ QP GN N+ +L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLIDTIKADALILHLNVLHELTQPEGNKNWENLLPKIKEVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + +K+G++ DIAG GGTSWS++E++R +++ I F + Sbjct: 189 VPVIVKEVGYGLSKQVAKKLIKAGVKVLDIAGSGGTSWSQVEAYRAKNSMQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T SL+M + + IASGGL++G+D K+I +GA++ GLA LK A + Sbjct: 249 WGITTLDSLKMLQEISKDITIIASGGLQSGIDGAKAIRMGANIFGLAGKLLKAADIAESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I+ + ++ ++M G+ +++L Sbjct: 309 VLEEIQVIIEQLKITMLCTGSCTLKDL 335 >gi|114705300|ref|ZP_01438208.1| isopentenyl-diphosphate delta-isomerase, type 2 [Fulvimarina pelagi HTCC2506] gi|114540085|gb|EAU43205.1| isopentenyl-diphosphate delta-isomerase, type 2 [Fulvimarina pelagi HTCC2506] Length = 367 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 135/338 (39%), Positives = 196/338 (57%), Gaps = 12/338 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 + RKIDH++IV D +F D H ALPE++ DE+D SV FLG+ L Sbjct: 23 IGSRKIDHLDIVLAQ---DERARFAATGLDRVIFEHVALPELALDEIDLSVPFLGRTLRA 79 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPH 116 PLLISSMTGG + RIN +LA AAE +A+AVGSQRV LRQ AP Sbjct: 80 PLLISSMTGGPERS-ARINDHLAEAAEALNIALAVGSQRVALEGRGGRGLDLTLRQRAPS 138 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 ++SN+G Q +G +A +AV ++GAD L +HLNPLQE +Q G+T++ + S I Sbjct: 139 VPILSNIGGAQFVLGYGEDEAMRAVEMIGADALIIHLNPLQEAVQTGGDTDWRGVLSAIE 198 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESD 233 L + + VP+++KEVG G+S +++G+ D+AG GGTSW+++E+ R + Sbjct: 199 RLCANLTVPVVVKEVGAGISGPVARRLVEAGVSVIDVAGAGGTSWAQVEAARAPDPRQKA 258 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +F WGI T ++ AR C E IASGG+RNG+++ ++I GA L G A+ LK Sbjct: 259 IAELFAGWGIGTARAVADARLACPETPIIASGGIRNGIEVAQAIRCGADLAGQAAATLKA 318 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A S++AV+A E + + + F G+ ++ L T Sbjct: 319 AETSTEAVIAHFEDVIRTLRIVCFCTGSASIEALKTAT 356 >gi|57641405|ref|YP_183883.1| isopentenyl pyrophosphate isomerase [Thermococcus kodakarensis KOD1] gi|73920024|sp|Q76CZ1|IDI2_PYRKO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|42821331|dbj|BAD11790.1| isopentenyl diphosphate isomerase [Thermococcus kodakaraensis] gi|57159729|dbj|BAD85659.1| isopentenyl-diphosphate delta-isomerase [Thermococcus kodakarensis KOD1] Length = 374 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 129/334 (38%), Positives = 199/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P+ I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVTNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIFIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFSETIRERYGLEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + P++ KE G G+ SM++ + L+S GI D+ G GGTSWS +E +R ++ D+ Sbjct: 193 KAEFPYPIIAKETGAGV-SMEVAVRLESIGIDAIDVGGLGGTSWSGVEYYRAKDEIGKDL 251 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P LKPA Sbjct: 252 ALRFWDWGIKTAISVAEVR-YATELPIIATGGMRDGIAMAKALAMGATFAGVALPLLKPA 310 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ + +E +MFL+G + V+EL Sbjct: 311 VKGDVEGVIKILRRYIEEIRNAMFLVGARNVEEL 344 >gi|242399210|ref|YP_002994634.1| Isopentenyl-diphosphate delta-isomerase [Thermococcus sibiricus MM 739] gi|259491454|sp|C6A3U0|IDI2_THESM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|242265603|gb|ACS90285.1| Isopentenyl-diphosphate delta-isomerase [Thermococcus sibiricus MM 739] Length = 374 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 199/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F++ H +H +LPEI DE+D SVE LG+K +P++I+ M Sbjct: 13 RKFEHIEHCLKKQVEAHVSTQFENIHFVHTSLPEIDKDEIDLSVEVLGRKFDYPIMIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ +IN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGKINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDIFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++A +AV + AD L +H+NPLQE +QP G+T + + + +A L Sbjct: 133 LGAPQFAENMPNRYGVEEALKAVETIQADALAIHMNPLQESVQPEGDTQYKGVITALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + P++ KE G G+ SM++ + L+S GI D+ G GGTSWS +E +R + ++ Sbjct: 193 KGELSYPIIAKETGAGV-SMEVAIKLESIGIDAIDVGGLGGTSWSSVEYYRAKDEKSKNL 251 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPT LS+ R Y IA+GG+R+G+ I K++ LGA+L G+A P LKPA Sbjct: 252 ALKFWDWGIPTALSVAEVR-YATGLPIIATGGIRDGIMIAKALALGANLAGVALPLLKPA 310 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + V+ ++ E MFL+G V+EL Sbjct: 311 VNGDVEGVIKILQQYIDELRNVMFLVGAGSVKEL 344 >gi|240103883|ref|YP_002960192.1| isopentenyl pyrophosphate isomerase [Thermococcus gammatolerans EJ3] gi|239911437|gb|ACS34328.1| Isopentenyl-diphosphate delta-isomerase (fni) [Thermococcus gammatolerans EJ3] Length = 375 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 128/334 (38%), Positives = 198/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P+ I+ M Sbjct: 16 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIFIAGM 75 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 76 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 135 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 136 LGAPQFSETIPERYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 195 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + P++ KE G G+S ++ + L+S GI D+ G GGTSWS +E +R ++ ++ Sbjct: 196 KAEFPYPIIAKETGAGVSK-EVAVRLESIGIDAIDVGGLGGTSWSAVEYYRAKDEMGRNL 254 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P LKPA Sbjct: 255 ALRFWDWGIKTAISVAEVR-YSTELPIIATGGMRDGITMAKALAMGATFAGVALPLLKPA 313 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ + +E +MFL+G K V+EL Sbjct: 314 VKGDVEGVIKILRRYIEEIRNAMFLVGAKNVEEL 347 >gi|126656673|ref|ZP_01727887.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. CCY0110] gi|126621893|gb|EAZ92601.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. CCY0110] Length = 354 Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 197/331 (59%), Gaps = 5/331 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DH+NIV ++ + F+ + + H ALP++ D+VD S++ GK L PL Sbjct: 15 LIENRKADHLNIVLQEDVAGKGITTGFEQFLIEHDALPDVDLDDVDLSLQLWGKTLQAPL 74 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA AA+ +AM VGSQR N K++++RQ AP+ +L Sbjct: 75 LISSMTGGTDSA-HIINLNLAEAAQALGIAMGVGSQRAAIEQPNLGKTYKIRQVAPNILL 133 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L KIA ++ Sbjct: 134 FANLGAVQLNYGYGIDEAKKAVDMIEADALILHLNPLQEAVQAEGDRNWKGLYDKIATVA 193 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGI 236 + ++VP++ KEVG G+S G+ DIAG GGTSWS +E++R + I Sbjct: 194 TQLEVPIIAKEVGNGISGKVARRLADCGVSAIDIAGAGGTSWSEVEAYRQHDPRRRQIAH 253 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +SL R E ASGG+RNG+D K+I LGASL G A+P L A Sbjct: 254 CFAGWGIPTAMSLMQVREAVPELPVFASGGIRNGIDAAKAIALGASLVGSAAPLLDAATH 313 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S AV L + ++ F G + EL Sbjct: 314 QSQAVYDKFSILLETLKIATFCAGVSNLTEL 344 >gi|149183685|ref|ZP_01862098.1| isopentenyl pyrophosphate isomerase [Bacillus sp. SG-1] gi|148848612|gb|EDL62849.1| isopentenyl pyrophosphate isomerase [Bacillus sp. SG-1] Length = 345 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 188/332 (56%), Gaps = 6/332 (1%) Query: 1 MVNDRKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +HI+I + KD F+ + H ALPEI F E+D S K+L P Sbjct: 6 ITEKRKTEHIDICLSKDVEPVEMTTGFESFRFQHNALPEIDFQEIDLSTRLFDKQLKVPF 65 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + +IN LA AEK AM VGS R ++++R++AP + Sbjct: 66 LISSMTGGT-ETAAKINETLAKTAEKRGWAMGVGSMRTAIEKEQTAYTYDVRKHAPTIPI 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GAVQ NY +GV++ +AV ++ AD + LHLN +QE+ QP G+TNF DL KI ++ Sbjct: 125 LANIGAVQFNYGYGVEQCQRAVDLIKADAIILHLNSMQEVFQPEGDTNFKDLLPKIEKVA 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGI 236 ++ VP+ +KEVG G+SS ++G+ + D+AG GGTSW ++E++R L + Sbjct: 185 RSLPVPVGVKEVGMGISSATARRLYEAGVSFIDVAGAGGTSWIQVEAYRSKDPLRAKAAE 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAM 295 F+ WGIPT SL R E ASGG++NGV K+I LGA + G L A+ Sbjct: 245 AFRGWGIPTAESLLQIRRDVPEVPLFASGGMKNGVHAAKAIALGADIAGFGRSLLPSAAV 304 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A+ + + E +MF +G +++L Sbjct: 305 SDGEALDGQFQQIEFELRAAMFGIGVYSIEQL 336 >gi|52549225|gb|AAU83074.1| L-lactate dehydrogenase [uncultured archaeon GZfos26E7] Length = 375 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/338 (40%), Positives = 191/338 (56%), Gaps = 13/338 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKI+H+ I DP FDD HLIH ALPEI DE+D S E GK ++ PLLI+SM Sbjct: 30 RKIEHLQICANDPVEAHVSAGFDDVHLIHCALPEIDKDEIDTSTELFGKVMAAPLLIASM 89 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ IN LA+AAE + + VGSQR + +F + R APH + +N+ Sbjct: 90 TGGHPDTYP-INEALALAAEHLGIGIGVGSQRAALENPEQEGTFRVVRDCAPHAFVYANI 148 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G VQL ++G+ A+ ++ AD + +HLN LQE IQP G T+ I + A+ Sbjct: 149 GVVQLT-EYGIDGVEHAIEMIEADAIAIHLNFLQEAIQPEGCTHARGSLDAIKDVCDAVS 207 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------SDIGIV 237 VP++ KE G G+S + +G+ D+ G GGTSW+ +E +R L+ +G + Sbjct: 208 VPVIAKETGAGISREVAAMLAAAGVDAIDVGGAGGTSWAGVEYYRALDRGDLISEHLGGL 267 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT S +E A C IA+GG+R G+DI KSI LGASL G A P + PAM Sbjct: 268 FWDWGIPTAASVVECAS--CG-LPVIATGGVRTGIDIAKSIALGASLSGTALPLVAPAMK 324 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++DAV+ + + E ++MFL G V +L +I Sbjct: 325 NADAVIDRLSCMISELEIAMFLCGCPDVADLKTAPVVI 362 >gi|269838030|ref|YP_003320258.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sphaerobacter thermophilus DSM 20745] gi|269787293|gb|ACZ39436.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sphaerobacter thermophilus DSM 20745] Length = 501 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 191/334 (57%), Gaps = 5/334 (1%) Query: 5 RKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+ I + +D F+ + + ALPEI D+VD G++L+ PLLIS Sbjct: 17 RKAEHLRINLDEDVSAKGVTTGFERYRFVPAALPEIDLDQVDTGTTLFGRRLAAPLLISC 76 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + ERIN LA AA++ +A+ +GS RV+ + +F +R AP +L++NL Sbjct: 77 MTGGVPEA-ERINLTLAGAAQEIGLAVGLGSGRVLLEHPEVLPTFRVRPEAPDVLLLANL 135 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLN G + V L AD L LHLN LQE +QP G+T FA L +IA L + ++ Sbjct: 136 GAVQLNLGVGPDQCRWLVEQLEADALVLHLNALQEALQPGGDTRFAGLLDRIAALCAVLE 195 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG G+ + ++G+ D+AG GGTSWS +E HR ++ + F Sbjct: 196 VPVIVKEVGWGIPPDTVVRLFEAGVAAVDVAGAGGTSWSEVERHRMEGEVRRRVAAAFAG 255 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT +L AR + ASGG+R+G+D K++ LGA L G+A PFL+ A +A Sbjct: 256 WGIPTAEALRGARRVAPDRLIFASGGIRDGMDAAKAVALGADLVGMAGPFLRAADQGPEA 315 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V L + ++MF +G ++EL L+ Sbjct: 316 VHDLATELIETLRITMFCIGASTLEELRGTPRLV 349 >gi|297624390|ref|YP_003705824.1| isopentenyl-diphosphate delta-isomerase, type 2 [Truepera radiovictrix DSM 17093] gi|297165570|gb|ADI15281.1| isopentenyl-diphosphate delta-isomerase, type 2 [Truepera radiovictrix DSM 17093] Length = 344 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 188/334 (56%), Gaps = 1/334 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+ H+ + P F+ + L +RALPE +D FLGK L+ PLLI Sbjct: 10 LEARKLKHLEVCLHYPVEFERTTGFERFELPYRALPESDLSRIDLRTRFLGKPLAAPLLI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + INR+LA AA++ + + +GSQRVM A+ SF++R+YAP +LI Sbjct: 70 GAMTGGAARAA-LINRHLAEAAQRLGIGLMLGSQRVMLEHPEALASFQVRRYAPEALLIG 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QLN +G + +AV ++ AD L LH NPLQE +QP G+ +F+ L K+ L Sbjct: 129 NLGVAQLNKGYGAAELTRAVSLIQADALALHTNPLQEALQPGGDADFSALVPKLHALVPE 188 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+LLKEVG GLS +G D+AG GGTSW+++E + +W Sbjct: 189 LPFPVLLKEVGHGLSPAVAAAVEGAGFAALDVAGAGGTSWAKVELYARYGELRHPELAEW 248 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT +L R E +ASGG+R G+D K++ +GA + LA P L PA++S++AV Sbjct: 249 GIPTADALLGVRRALPEMPLVASGGVRTGLDAAKALAMGAQVVALARPLLAPALESAEAV 308 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 VA +++L E V+M G + L L R Sbjct: 309 VAHLKTLLWELRVAMHCAGASDLAALARTELLPR 342 >gi|332968012|gb|EGK07099.1| isopentenyl-diphosphate delta-isomerase [Desmospora sp. 8437] Length = 347 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 135/331 (40%), Positives = 185/331 (55%), Gaps = 12/331 (3%) Query: 5 RKIDHINIV----CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +HI IV GI F+ + +H+ALPE + ++ + FLGK L P L Sbjct: 11 RKSEHIEIVLNRKVSGSGITTG---FEKYRFVHQALPETRYTDISLATNFLGKSLKVPFL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG +K +IN+NLA AA+ AM +GS R + +F +R+ AP ++ Sbjct: 68 ISSMTGGTDKAA-KINQNLAAAAQARGWAMGLGSVRAAIEHPDTAATFNVRKVAPTIPIL 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +GV QAV + ADGL HLN LQE+ QP GNT+F +L K+ L S Sbjct: 127 ANLGAVQLNYGYGVDHCRQAVELSEADGLVFHLNSLQEVFQPEGNTDFRNLLRKLEDLCS 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 ++VP+ +KEVG G+ G+ + D+AG GGTSWS++E +R L Sbjct: 187 VLEVPVGVKEVGWGIDGESARRLFDVGVDFVDVAGAGGTSWSQVEKYRSENPLLFQAAEA 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-D 296 F+ WG PT + R E IASGGL NGVD K+I LGA L G LK A Sbjct: 247 FESWGHPTSECIREGRALNPEGTLIASGGLNNGVDGAKAIALGADLAGYGRSLLKAATAP 306 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + DA+ + +E + E ++MF G R++ L Sbjct: 307 TPDAIASQLERIETECRIAMFGTGIDRIEAL 337 >gi|147921500|ref|YP_684685.1| isopentenyl pyrophosphate isomerase [uncultured methanogenic archaeon RC-I] gi|110620081|emb|CAJ35359.1| isopentenyl-diphosphate delta-isomerase [uncultured methanogenic archaeon RC-I] Length = 357 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 137/344 (39%), Positives = 202/344 (58%), Gaps = 21/344 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+H++I C + ++ + FDD LIHR LPE+ V FLG K S P++I Sbjct: 3 TSKRKIEHLDI-CVNEKVESHGSGFDDVELIHRCLPELDKSAVSTETRFLGHKFSAPIMI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ + +N NLA AAE + + VGSQR D +S+ + R AP+ + Sbjct: 62 ASMTGGHPETT-VVNANLAKAAEALGIGIGVGSQRAALEDPAQEESYRVVRDAAPNAFIY 120 Query: 121 SNLGAVQ-LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q L+YD +K +AV ++ AD L +HLN LQE IQP G+ N KIA ++ Sbjct: 121 GNIGAPQILHYDL--EKIERAVKMIDADALAIHLNFLQEAIQPEGDLNAKGCLEKIAEVA 178 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-DLESD----- 233 S++ VP+++KE G G+S +D K+G+ D+ GRGGTSW+ +E +R +E D Sbjct: 179 SSLSVPVIVKETGAGISHIDAYTLRKAGVSALDVGGRGGTSWAGVEVYRARMEKDRIGEH 238 Query: 234 IGIVFQDWGIPTPLSL---EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +G F DWGIPT +S+ ++ P IA+GG+R+G+ + KSI LGASL G+A P Sbjct: 239 LGNKFWDWGIPTAVSIIEADVGLP------IIATGGIRDGITVAKSIALGASLAGIALPL 292 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + A DS D V +E +E +MFL G + ++ L A+I Sbjct: 293 VSAARDSPDKVQEVLEVYIEELRATMFLTGAQSIEALKRAPAVI 336 >gi|124485506|ref|YP_001030122.1| isopentenyl pyrophosphate isomerase [Methanocorpusculum labreanum Z] gi|124363047|gb|ABN06855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocorpusculum labreanum Z] Length = 355 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 133/337 (39%), Positives = 191/337 (56%), Gaps = 16/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ + C + + F+D L+H ALPE D +D SV+FLG+ LS PL I Sbjct: 7 TSSRKLDHLRL-CSETDVTAGSAGFEDIILVHNALPECDLDRIDLSVDFLGRNLSSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ E +NR L AAEK +AM VGSQR + SF + R APH L Sbjct: 66 SAMTGGHPDTAE-VNRVLGSAAEKYGLAMGVGSQRAALENPELADSFSVVRDAAPHAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQL G++ AV ++ AD L +HLN LQE +QP G+ + I+ Sbjct: 125 GNIGAVQL-ASHGMEWVDAAVDMIDADALCIHLNFLQEAVQPEGDHDATSCLDAISTACK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------- 233 +VP+++KE GCG+SS +G+ D G GGTSW++IE R + D Sbjct: 184 EANVPIIVKETGCGISSEVAARLFDAGVSAIDTGGYGGTSWAKIEGARAQKRDAAGDKAL 243 Query: 234 --IGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +G WGIPT +S+ E+A+ ++ IA+GGL+ G+DI K I+LGA+LGG+A Sbjct: 244 AGLGNSLHTWGIPTTVSVFEVAK--VSKGPVIATGGLKTGLDIAKGIVLGATLGGMALSL 301 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PA+ + + +AI+ + E SMFL G + + L Sbjct: 302 LSPALSGEETLGSAIDKIHTELRASMFLCGAQDIASL 338 >gi|254172954|ref|ZP_04879628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermococcus sp. AM4] gi|214033110|gb|EEB73938.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermococcus sp. AM4] Length = 372 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 126/334 (37%), Positives = 198/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG++ +P+ I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRRFDYPIFIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFSETIPERYGIEEALKAVETIEADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + P++ KE G G+S ++ + L+S GI D+ G GGTSWS +E +R +L ++ Sbjct: 193 KAEFPYPIIAKETGAGVSK-EVAVRLESIGIDAIDVGGLGGTSWSAVEYYRAKDELGRNL 251 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +S+ R Y + IA+GG+R+G+ + K++ +GA+ G+A P LKPA Sbjct: 252 ALKFWDWGIKTAISVAEVR-YSTDLPIIATGGMRDGITMAKALAMGATFAGVALPLLKPA 310 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ + +E +MFL+G + V+EL Sbjct: 311 VKGDVEGVIKILRRYIEEIRNAMFLVGARNVEEL 344 >gi|23097992|ref|NP_691458.1| isopentenyl pyrophosphate isomerase [Oceanobacillus iheyensis HTE831] gi|32129631|sp|Q8EST0|IDI2_OCEIH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|22776216|dbj|BAC12493.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase) [Oceanobacillus iheyensis HTE831] Length = 349 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 188/331 (56%), Gaps = 7/331 (2%) Query: 2 VNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 +N RK +HI + G++++ + + IH ALPEI F ++ FLGK+L P Sbjct: 5 INQRKTEHIRLCLTGNVEGVNKSTGL-EGINFIHNALPEIDFADISLESSFLGKQLKAPF 63 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 L+SSMTGG+ ++ +IN+NLAIAAE+ A+A+GS R +SF +R AP L Sbjct: 64 LVSSMTGGS-ELATKINQNLAIAAEEKGWALAIGSTRAFLESDQHKESFLIRNQAPTAPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+GAVQLNY +G ++ + + AD + LHLN LQE +Q G+ NF DL KI + Sbjct: 123 IVNIGAVQLNYGYGPEECQRIIDKTNADSIVLHLNSLQEAVQDGGDLNFKDLLPKIEQVC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGI 236 + P+ +KEVG G+ +GI Y D+AG GGTSWS++E R L Sbjct: 183 KQVKAPVGVKEVGFGIDGEVARRLYDAGISYIDVAGAGGTSWSQVEKLRSKDPLNKAAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WG PT L R EA +ASGG++ GVD K+I +GA + G A LK AM+ Sbjct: 243 AFNNWGTPTKDCLVSVRGELPEAPLVASGGMKTGVDAAKAITIGADVVGFARHLLKAAME 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V+ +E L E ++MF +G ++EL Sbjct: 303 TPEDVIRTMEQLELELKMTMFGIGAVNLEEL 333 >gi|13878540|sp|O27997|IDI2_ARCFU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 345 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 130/329 (39%), Positives = 198/329 (60%), Gaps = 10/329 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RKIDH+ I C + ++ +D LIH+ALPE+ + ++D +EF GKKLSFPLLI+ Sbjct: 4 SKRKIDHLKI-CLEEEVESGYTGLEDVMLIHKALPEVDYWKIDTEIEFFGKKLSFPLLIA 62 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG+ + E IN L A E+ + M VGSQR D + SF + R+ AP+ + + Sbjct: 63 SMTGGHPETKE-INARLGEAVEEAGIGMGVGSQRAAIEDESLADSFTVVREKAPNAFVYA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+ + GV+ +AV ++ AD + +HLN LQE IQP G+ N + + + Sbjct: 122 NIGMPQV-IERGVEIVDRAVEMIDADAVAIHLNYLQEAIQPEGDLNAEKGLEVLEEVCRS 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP++ KE G G+S + ++G+ D+ G+GGT++S +E +R ++ +GI F Sbjct: 181 VKVPVIAKETGAGISREVAVMLKRAGVSAIDVGGKGGTTFSGVEVYRVNDEVSKSVGIDF 240 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+PT S+ R IA+GGLR+G+D+ KSI +GA LG A PFL+ A++S+ Sbjct: 241 WDWGLPTAFSIVDCRGIL---PVIATGGLRSGLDVAKSIAIGAELGSAALPFLRAAVESA 297 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V IE R+ +MFL G K V+EL Sbjct: 298 EKVREEIEYFRRGLKTAMFLTGCKNVEEL 326 >gi|14591025|ref|NP_143100.1| isopentenyl pyrophosphate isomerase [Pyrococcus horikoshii OT3] gi|13878542|sp|O58893|IDI2_PYRHO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|3257619|dbj|BAA30302.1| 371aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 371 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 199/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D + +H++LPEI DE+D +VEFLG+K +P++I+ M Sbjct: 9 RKFEHIEHCLKRNVEAHVSNGFEDVYFVHKSLPEIDKDEIDLTVEFLGRKFDYPIMITGM 68 Query: 65 TGGNNK--MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG + + +INR LA+AAE+ + VGSQR M +S+ +R AP LI N Sbjct: 69 TGGTRREEIAGKINRTLAMAAEELNIPFGVGSQRAMIEKPETWESYYVRDVAPDIFLIGN 128 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + + V++ A+ + AD + +H+NPLQE +QP G+T +A + +A + Sbjct: 129 LGAPQFGKNAKKRYSVKEVLYAIEKIEADAIAIHMNPLQESVQPEGDTTYAGVLEALAEI 188 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESD---I 234 S+++ P++ KE G G+S ++ + L+S GI DI+G GGTSWS +E +R +S+ I Sbjct: 189 KSSINYPVIAKETGAGVSK-EVAIELESVGIDAIDISGLGGTSWSAVEYYRAKDSEKRKI 247 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +SL R + IASGG+R+GV + K++ +GASL G+A P L+PA Sbjct: 248 ALKFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGVMMAKALAMGASLVGIALPVLRPA 306 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV I +E MFL+G + ++EL Sbjct: 307 ARGDVEGVVRIIRGYAEEIKNVMFLVGARNIREL 340 >gi|302348131|ref|YP_003815769.1| isopentenyl pyrophosphate isomerase [Acidilobus saccharovorans 345-15] gi|302328543|gb|ADL18738.1| isopentenyl pyrophosphate isomerase [Acidilobus saccharovorans 345-15] Length = 377 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/333 (38%), Positives = 201/333 (60%), Gaps = 10/333 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI+IV K + + ++HR+LPE + +++D SV+ G++L PL+I+ M Sbjct: 7 RKLEHIDIVRKGGVEPQETTLLEYVRIVHRSLPEANLEDIDLSVKLCGRELGAPLIITGM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ +E IN +A AEK +AM VGSQR D + I +F + R+ APH +++NL Sbjct: 67 TGGHPD-VEPINAAIAEVAEKFGIAMGVGSQRAAIEDSSMIHTFSVVRERAPHAFIVANL 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL +GV++A +AV ++ AD + +HLN QE+ Q G+T F+ + K+A L M Sbjct: 126 GGAQLAKGYGVKEALKAVEMIRADAIAIHLNIGQELFQDEGDTKFSGVLEKVAELVEEMP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD--- 240 VP+++KEVG GLS+ DI G++ FD+AG GGT+W +IE+ R ++ G +D Sbjct: 186 VPVIVKEVGTGLSAEDISALRSVGVKCFDVAGLGGTNWIKIEALRS-KAKHGAPLRDPAS 244 Query: 241 ----WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 WG PT +++ AR +A I SGGLR+G D+ K+I LGA +GG A+P L+ Sbjct: 245 IADLWGNPTAIAIVEARNAAPDAYIIGSGGLRDGHDVAKAIALGADVGGFAAPALRALSA 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + + + + +M + G+KR Q+L+L Sbjct: 305 GREGLERYVSQILYQLKAAMLMSGSKRPQDLWL 337 >gi|226355825|ref|YP_002785565.1| isopentenyl pyrophosphate isomerase [Deinococcus deserti VCD115] gi|226317815|gb|ACO45811.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (Isopentenylpyrophosphate isomerase) [Deinococcus deserti VCD115] Length = 340 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 125/327 (38%), Positives = 193/327 (59%), Gaps = 2/327 (0%) Query: 2 VNDRKIDHIN-IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK+ HI + D + +RALPE++ +V+ V FLG++LS PLL Sbjct: 10 LSARKLRHIEACLLPDSQYQGVTTGLETVRWPYRALPELNLADVNLEVSFLGRRLSAPLL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ++ +INRNLA AA++ + + +GSQRVM +F++R+ APH +L+ Sbjct: 70 IGAMTGGADRA-GQINRNLATAAQRLGIGLMLGSQRVMLERPEVAATFQVREVAPHVLLV 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG Q +G ++A QAV +GAD L +H+NPLQE +Q G+T++A L++++A L Sbjct: 129 GNLGGAQFLLGYGAEQAVQAVRQVGADALAIHVNPLQEALQAGGDTSWAGLATQLAALVP 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ P++LKEVG GL + + G R D+AG GGTSW+R+E + + Sbjct: 189 SLPFPVILKEVGHGLDARTVSTVAGMGFRALDVAGAGGTSWARVEELVRYGAVQRPDLCE 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L AR IASGG+R G+D ++++LGA + +A P L+PAMDS++A Sbjct: 249 IGVPTAQALRDARQQAPGVSLIASGGIRTGLDAARALLLGAQVVAVARPLLEPAMDSAEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + E VSMF+ G + L Sbjct: 309 VEVWLSRFIHELRVSMFVGGFADISSL 335 >gi|304314298|ref|YP_003849445.1| isopentenyl-diphosphate delta-isomerase [Methanothermobacter marburgensis str. Marburg] gi|302587757|gb|ADL58132.1| predicted isopentenyl-diphosphate delta-isomerase [Methanothermobacter marburgensis str. Marburg] Length = 348 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 125/336 (37%), Positives = 205/336 (61%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I+C ++ R F++ ++HRA+PEI+ +++D ++FLGK+LS P+ Sbjct: 1 MISDRKLEHL-ILCTSCDVEYRKSTGFEEIEMVHRAIPEINREKIDIGLDFLGKELSSPI 59 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +IS++TGG+ + +INR LA AAE+ +A+ +GSQR +++ + R+ AP + Sbjct: 60 MISAITGGHPAAL-KINRELARAAEELGIALGLGSQRAGVEHPEVEETYAIARKEAPSAM 118 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L+ N+G+ + Y A +AV ++ AD L +HLNPLQE IQP G+ + I+ + Sbjct: 119 LVGNIGSSHIEY------AERAVEMIDADALAVHLNPLQESIQPGGDVDSTGALESISSI 172 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +MDVP+++KE G G+SS D G+ D+AG GGTSW+ +E++R + +G +F Sbjct: 173 VKSMDVPVMVKETGAGISSEDAIKLEACGVAAIDVAGAGGTSWAAVETYRADDRYLGELF 232 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT S N IASGG+R+G+D K+I LGA++ G+A P L+ A Sbjct: 233 WDWGIPTAASTVEVAESVN-VPVIASGGIRSGLDAAKAIALGATMAGIALPVLEAAGQGY 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AV+ IE + +M+L G + + +L + +I Sbjct: 292 RAVIRVIERFNEALKTAMYLAGAETLDDLRNSQVII 327 >gi|76800834|ref|YP_325842.1| isopentenyl pyrophosphate isomerase [Natronomonas pharaonis DSM 2160] gi|91207074|sp|Q3IUB0|IDI2_NATPD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|76556699|emb|CAI48271.1| isopentenyl-diphosphate delta-isomerase II 1 [Natronomonas pharaonis DSM 2160] Length = 358 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 129/337 (38%), Positives = 202/337 (59%), Gaps = 18/337 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DH+ I+ ++ ++ D L+H ALP++ +D++D S+ FLG +L P++I Sbjct: 9 TEDRKDDHVRII-REEDVESGGTGLGDVRLVHEALPDVHYDDIDTSIPFLGAELDAPIVI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTV 118 SMTGG+ + INR LA AA +T +AM VGSQR + D ++S+ + R+ AP Sbjct: 68 ESMTGGHANTTD-INRALAAAAAETGIAMGVGSQRAGLELDDEGVLESYTVVREAAPDAF 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + I + Sbjct: 127 LYGNLGAAQLK-EYDLETVERAVEMIDADALAVHLNFLQEAVQPEGDVDARGCLPAIERV 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 + VP+++KE G G ++ +G+ D+AG+GGT+WS +E++R + Sbjct: 186 VDGLSVPVVVKETGNGFAAETARRLADAGVDAIDVAGKGGTTWSGVEAYRAAAVGASRQE 245 Query: 233 DIGIVFQDWGIPTPLS-LEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +G +F++WG+PT +S LE A + C +ASGG+R G+D+ K+I LGA GGLA PF Sbjct: 246 RVGELFREWGVPTAVSTLECAAEHDC----VVASGGVRTGLDVAKAIALGARAGGLAKPF 301 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L+PA ++AVV IE L+ E +MF+ G+ V +L Sbjct: 302 LEPAASGTEAVVERIEDLKTELRTAMFVTGSPTVADL 338 >gi|14521271|ref|NP_126746.1| isopentenyl pyrophosphate isomerase [Pyrococcus abyssi GE5] gi|13878567|sp|Q9UZS9|IDI2_PYRAB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|5458489|emb|CAB49977.1| fnI isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) [Pyrococcus abyssi GE5] Length = 370 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 127/335 (37%), Positives = 202/335 (60%), Gaps = 15/335 (4%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +HI C ++ + F+D HLIH++LPEI DE+D SV+FLG+K +P++I+ Sbjct: 8 RKFEHIK-HCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITG 66 Query: 64 MTGGNNK--MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 MTGG K + RINR LA AA++ + + +GSQR M +S+ +R AP L+ Sbjct: 67 MTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLVG 126 Query: 122 NLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 NLGA Q + + V + A+ + AD + +H+NPLQE IQP G+T F+ + +A Sbjct: 127 NLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAE 186 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESD--- 233 ++S +D P++ KE G G+S ++ + L++ G+ DI+G GGTSWS +E +R + + Sbjct: 187 ITSTIDYPVIAKETGAGVSK-EVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRN 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + + F DWGI T +SL R + IASGG+R+G+ + K++ +GAS+ G+A P L+P Sbjct: 246 LALKFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRP 304 Query: 294 AMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V+ I+ +E MFL+G + ++EL Sbjct: 305 AAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKEL 339 >gi|291294796|ref|YP_003506194.1| isopentenyl-diphosphate delta-isomerase type 2 [Meiothermus ruber DSM 1279] gi|290469755|gb|ADD27174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus ruber DSM 1279] Length = 340 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 2/326 (0%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK H+ + ++P R F+ + L +RALPE++ +EVD + FLGK L P L Sbjct: 7 IQTRKRKHLEVCLREPVAYTRLTTGFERYRLRYRALPELALEEVDLTTRFLGKTLRAPFL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG RINR LA AAE+ V M +GSQRVM A SF++R AP+T+L+ Sbjct: 67 IGAMTGGEAHG-GRINRALAQAAEQLGVGMMLGSQRVMLEHPQARASFQVRAVAPNTLLV 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQLN +G++ QAV ++ AD L LH+NPLQE +Q G+T+F L K+ L Sbjct: 126 GNLGLVQLNKGYGLEHLEQAVKLVQADALALHINPLQEALQVGGDTDFRGLLDKLRGLLP 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P++LKEVG G+ + D+AG GGTSW+R+E + + Sbjct: 186 QLPFPVVLKEVGHGIGREIAQQLAPLPFAALDVAGAGGTSWARVEELVHHGRILHPELVE 245 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 GIPT +L R IASGG+RNG + K++ LGA + +A P L+PA+ +A Sbjct: 246 VGIPTAQALVECRSVLPHQPLIASGGIRNGTEAAKALALGAQVVAVARPLLEPALQGPEA 305 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 VVA I++ E V++F +G + E Sbjct: 306 VVAWIKNFLHELRVALFAIGARTPAE 331 >gi|20803891|emb|CAD31469.1| PROBABLE OXIDOREDUCTASE PROTEIN DEHYDROGENASE [Mesorhizobium loti R7A] Length = 373 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 135/333 (40%), Positives = 196/333 (58%), Gaps = 16/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH++IV +DR W I H ALPE+ ++D LGK + P Sbjct: 33 RKDDHLDIV-----LDRRTAPATVAAGWEYIRFEHCALPELDLTQIDLRASLLGKTMRAP 87 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHT 117 LLISSMTGG + E INR+L+ AA+ +AM VGSQRV N+ + LR+ AP Sbjct: 88 LLISSMTGGVPRA-EAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRMAPDI 146 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 L++N+GA QL G+ A +AV L ADGL +HLN LQE +QP G+ ++ + ++IA Sbjct: 147 PLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNALQEAVQPEGDRDWRGVLAQIAR 206 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDI 234 +S++DVP++ KEVG GLS+ +K+G+ D+AG GGTSW+ +E + + Sbjct: 207 AASSVDVPIVAKEVGSGLSASVACALVKAGVAVIDVAGAGGTSWAAVEGERARDAADRAV 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A Sbjct: 267 AMAFADWGIPTPASVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAA 326 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++AVVA E + ++ V+ F G+ + L Sbjct: 327 TVSTEAVVAHFEIVIRQLAVACFCTGSADLAAL 359 >gi|15922379|ref|NP_378048.1| isopentenyl pyrophosphate isomerase [Sulfolobus tokodaii str. 7] gi|20978496|sp|Q96YW9|IDI2_SULTO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15623168|dbj|BAB67157.1| 369aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 369 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 119/333 (35%), Positives = 201/333 (60%), Gaps = 9/333 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RKI+H+ I C ++ F+D LIH++LP S +V + FLGKK+S P++I Sbjct: 6 ITNRKIEHVEI-CLYENVEFGSTLFEDVTLIHQSLPGFSLADVSTTTNFLGKKMSAPIII 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG ++ +IN +A E+ + M VGSQR+ ++F + R+ AP++ +I Sbjct: 65 TGMTGGLPEL-GKINETIAEVIEELGLGMGVGSQRIAIEKKETKETFSIVRKKAPNSPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLS 179 +NLGA Q + +++ +A+ ++ AD + +H N QE+ QP G N++ ++ K+ +S Sbjct: 124 ANLGAPQFVKGYSLEQVEEAIQMIEADAIAIHFNSAQEVFQPEGEPNYSIEILYKLIDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDI 234 ++ VP+++KE G GLS ++ ++GI+YFD +G GGTSW +E +R L +++ Sbjct: 184 KSLKVPIIIKESGSGLSMEVTKMFYENGIKYFDTSGTGGTSWVSVEMYRGLRRNNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +F DWGIPT S+ R + I SGG+RNG+++ K+I LGA +GG A P LK A Sbjct: 244 AKLFLDWGIPTAASIVEVRSIAQDGTIIGSGGVRNGLEVAKAIALGADIGGFALPALKAA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + ++++ ++ + E V+MFL G K + EL Sbjct: 304 VKGKESLMNFLKKVIFELKVAMFLSGNKTIGEL 336 >gi|304407441|ref|ZP_07389093.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus curdlanolyticus YK9] gi|304343392|gb|EFM09234.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus curdlanolyticus YK9] Length = 359 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 187/336 (55%), Gaps = 7/336 (2%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +HI I ++ G + F+ + +H ALPE+SFD + FLGKKL PLL+SS Sbjct: 19 RKGEHIRICLEEEVGAVGVQSGFERYRFLHNALPELSFDSISLETFFLGKKLRAPLLVSS 78 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG ++ IN LA AAE A+ +GS R + + SF +R+ AP +I+NL Sbjct: 79 MTGGTDEA-SSINLRLAEAAEARGWAIGLGSMRAAIEEESLAASFRIREVAPSVPVIANL 137 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQL +G + +AV + AD L LHLN +QE+ QP G+T+F+ L +I + ++ Sbjct: 138 GAVQLGLGYGAAQCRRAVELAEADALVLHLNGMQELFQPEGDTDFSSLLRRIGEVCEQLE 197 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQD 240 VP+ +KEVG G+ L +G+ + D+AG GGTSWS++E R + VF D Sbjct: 198 VPVGVKEVGWGIDGRTASRLLDAGVAFIDVAGAGGTSWSQVEKFRSTDPMRRAAAEVFAD 257 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--MDSS 298 WGIPT + R A +ASGGLRNGV+ K+I LGA L G L A ++ + Sbjct: 258 WGIPTAACITDVRREQPSAVLVASGGLRNGVEAAKAIALGADLVGFGRTLLPNAATLEGN 317 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +V E + E +MF +G K VQ L L+ Sbjct: 318 ASVEQQFEQIEFELRAAMFGIGAKDVQTLRETDRLV 353 >gi|251798440|ref|YP_003013171.1| isopentenyl pyrophosphate isomerase [Paenibacillus sp. JDR-2] gi|247546066|gb|ACT03085.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. JDR-2] Length = 356 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 133/345 (38%), Positives = 187/345 (54%), Gaps = 16/345 (4%) Query: 2 VNDRKIDHINIVCKD----PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 + RK +HI I ++ GI+ FD + H ALPEI+FD++ E+LG+++ Sbjct: 13 TSKRKSEHIRICLQENVAGEGIETG---FDQFRFRHNALPEIAFDDIRLDTEWLGRRMRT 69 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PLL+SSMTGG N+ INR LA AAE A+ +GS R SF +R AP Sbjct: 70 PLLVSSMTGGTNEA-GAINRRLAEAAETRGWAIGLGSMRAAIEQEELAASFYIRDIAPSV 128 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +I+NLGAVQLNY +GV +AV + AD L LHLN +QE+ QP G+TNF L +I Sbjct: 129 PVIANLGAVQLNYGYGVDACRKAVEIAEADALVLHLNSMQEVFQPEGDTNFRSLLPRIGE 188 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDI 234 + A+ VP+ +KEVG G+ + +G + D+AG GGTSWS++E +R + Sbjct: 189 VCRALSVPVGIKEVGWGIDADTAAALASAGAAFIDVAGAGGTSWSQVEKYRQNDPMRRLA 248 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F WGIPT S+ + IASGGL++GVD KSI LGA + G L A Sbjct: 249 AEAFAGWGIPTAESVREVKSRLPNTTVIASGGLQHGVDAAKSIALGADIAGFGRALLPRA 308 Query: 295 MD-----SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + S + ++ E + E +MF +G + +L T LI Sbjct: 309 ANGETRVSVEQLIEQFERIEFELRAAMFGIGAAAISDLQHTTRLI 353 >gi|332159384|ref|YP_004424663.1| isopentenyl pyrophosphate isomerase [Pyrococcus sp. NA2] gi|331034847|gb|AEC52659.1| isopentenyl pyrophosphate isomerase [Pyrococcus sp. NA2] Length = 374 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 126/334 (37%), Positives = 198/334 (59%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H++LPE+ DE+D +VEF G+K +P++I+ M Sbjct: 13 RKFEHIEHCLKRNVEAHVTNGFEDIHFVHKSLPEVDRDEIDLTVEFFGRKFDYPIMITGM 72 Query: 65 TGGNNK--MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K + +INR LA AAE+ + + +GSQR M +S+ +R AP LI N Sbjct: 73 TGGTRKDEIAGKINRTLAQAAEELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLIGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + + V++ A+ + AD + +H+NPLQE +QP G+T FA + +A + Sbjct: 133 LGAPQFGRNAKKRYSVEEVLYAIEKIEADAIAIHMNPLQESVQPEGDTTFAGVLEALAEI 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR---DLESDI 234 + + P++ KE G G+S ++ + L++ GI DI+G GGTSWS +E +R + + + Sbjct: 193 KANISYPIIAKETGAGVSK-EVAIELEAIGIDAIDISGLGGTSWSAVEYYRAKDEGKRRL 251 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGI T +SL R + IASGG+R+G+ + K++ +GA++ G+A P LKPA Sbjct: 252 ALRFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGISMAKALAMGATMVGIALPVLKPA 310 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV I++ +E +MFL+G K V+EL Sbjct: 311 ARGDVEGVVRIIKNYAEEIRNAMFLVGAKNVKEL 344 >gi|190894248|ref|YP_001984542.1| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CIAT 652] gi|190699909|gb|ACE93992.1| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CIAT 652] Length = 377 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 131/333 (39%), Positives = 198/333 (59%), Gaps = 16/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH+++V +DR W I H ALPE+ +++ LGK + P Sbjct: 31 RKDDHLDLV-----LDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAP 85 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHT 117 LLISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP Sbjct: 86 LLISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDI 144 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 L++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A Sbjct: 145 PLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVAR 204 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DI 234 + ++ VP++ KEVG GLS+ +++G+ D+AG GGTSW+ +E R ++ + Sbjct: 205 AARSVGVPIVAKEVGWGLSASVACALVEAGVEVIDVAGAGGTSWAAVEGERARDAAGRAV 264 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPTP SL+ R + IASGG+R+GVD+ K+I LGA + G A+ L A Sbjct: 265 AMAFADWGIPTPASLQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAA 324 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++AVVA E + ++ V+ F G+ + L Sbjct: 325 TVSTEAVVAHFEVVIRQLAVACFCTGSPDLATL 357 >gi|108803250|ref|YP_643187.1| isopentenyl pyrophosphate isomerase [Rubrobacter xylanophilus DSM 9941] gi|108764493|gb|ABG03375.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Rubrobacter xylanophilus DSM 9941] Length = 351 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 126/333 (37%), Positives = 193/333 (57%), Gaps = 8/333 (2%) Query: 5 RKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +HI I C + +D F+ + + + +LPE+ VD S LG++LS P +I Sbjct: 17 RKKEHIRI-CLEEDVDHPVLTTGFERYRVPYASLPELDLAAVDLSCGMLGRRLSMPFMIL 75 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG ++ INRNLA AA++ +VA+ +GS R+ D A +SF +R+ P L +N Sbjct: 76 SMTGGA-RLSRTINRNLARAAQECRVALGLGSMRIALEDPAAAESFRVRELCPDVPLWAN 134 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA QLN FGV++ + V + GADGL LHLN LQE QP G+T+++ ++ K+A ++ + Sbjct: 135 LGAAQLNRGFGVEECRRVVEISGADGLCLHLNALQEAAQPGGDTDWSGIAEKLAAVAGEL 194 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+ + + D+ G GGTSW +E D+ F +G Sbjct: 195 GVPVIVKEVGFGIGPRTARMLGGLPVWGVDVGGAGGTSWLEVEKRAWGRDDLD-AFDAFG 253 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 PT S+ + R +C + I SGG+R GVD +K++ LGA + G A P L+PA +S +AV+ Sbjct: 254 TPTAESISVVRKHCPDKLVIGSGGVRTGVDAVKALALGADMVGAARPLLRPATESEEAVI 313 Query: 303 AAIESLRKEFIVSMFLLGT---KRVQELYLNTA 332 + R+E ++ F G ++EL L A Sbjct: 314 RWLRRFREEMRLAAFCAGAPDLNALRELELEPA 346 >gi|148643501|ref|YP_001274014.1| isopentenyl pyrophosphate isomerase [Methanobrevibacter smithii ATCC 35061] gi|148552518|gb|ABQ87646.1| isopentenyl-diphosphate delta-isomerase [Methanobrevibacter smithii ATCC 35061] Length = 348 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 128/330 (38%), Positives = 203/330 (61%), Gaps = 13/330 (3%) Query: 1 MVNDRKIDHINIVCKDPGID-RNKKF-FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M++DRK++H+ ++CK+ ++ +NKK F+D LIH+ALPEI +E+D S GKKL P Sbjct: 1 MISDRKLEHL-LICKNYDVEFKNKKTGFEDVELIHKALPEIDKNEIDLSTSVFGKKLDSP 59 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 L I+++TGG+ + IN+ LAIAAE +A+ VGSQR ++ + R+ AP Sbjct: 60 LFITAITGGH-PAAKAINKQLAIAAESKNIALGVGSQRAAIEHPELADTYTVVRKNAPDC 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L+ N+GA QL+ A +AV +L AD L +HLNPLQE IQP G+ + I Sbjct: 119 LLVGNIGAPQLDL------ADKAVEILDADILAIHLNPLQESIQPEGDLDARGYLDSINQ 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 ++ +D+P++ KE GCG+S+ + + +G+ Y DI G GGTSW+ +E++R + +G Sbjct: 173 ITKRVDIPVMAKETGCGISAEMAKQLVDAGVSYIDIEGAGGTSWAAVETYRAEDRYLGET 232 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT +S + + ++SGG+R+G++ K+I LGA G+A PFLK ++ S Sbjct: 233 FWDWGIPTAIST-VEVADAVDVPVVSSGGIRSGLEAAKAIALGADSVGMALPFLKHSV-S 290 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I+ ++MFL+G ++EL Sbjct: 291 EEQLTTFIDRFNDSLRIAMFLVGANNIEEL 320 >gi|166709967|ref|ZP_02241174.1| isopentenyl pyrophosphate isomerase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 366 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 195/330 (59%), Gaps = 10/330 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK DH++IV W I H ALPE+ ++D LGK L PLLI Sbjct: 31 RKDDHLDIVLAR--QAATAAAMPGWERIRFEHCALPELDLAQIDLRASLLGKTLRAPLLI 88 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + + INR+L+ AA+ +AM VGSQRV ++ + LR+ AP L+ Sbjct: 89 SSMTGGMPRA-DAINRHLSEAAQTLGIAMGVGSQRVSLQSRSSQGLTRALRRNAPDIPLL 147 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA QL G+ A +AV VL ADGL +HLNPLQE +QP G+ ++ + ++IA + Sbjct: 148 ANIGAAQLCEADGLDLARRAVDVLEADGLIIHLNPLQEAVQPEGDRDWRGVLAQIARTAR 207 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 ++ VP+++KEVG GLS+ +++G+ D+AG GGTSW+ +E R L+ + + Sbjct: 208 SIGVPIVVKEVGSGLSATVACALVEAGVAVIDVAGAGGTSWAAVEGERALDPADRAVAMA 267 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A S Sbjct: 268 FAEWGIPTPTSVQAIRRTLPAVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAATVS 327 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++AVV E + ++ V+ F G+ + L Sbjct: 328 TEAVVTHFEIVIRQLAVACFCTGSADLAAL 357 >gi|15678077|ref|NP_275191.1| isopentenyl pyrophosphate isomerase [Methanothermobacter thermautotrophicus str. Delta H] gi|13878539|sp|O26154|IDI2_METTH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|2621084|gb|AAB84555.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 349 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 129/338 (38%), Positives = 209/338 (61%), Gaps = 15/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I+C ++ R K F+D ++HRA+PEI+ +++D S++FLG++LS P+ Sbjct: 1 MISDRKLEHL-ILCASCDVEYRKKTGFEDIEIVHRAIPEINKEKIDISLDFLGRELSSPV 59 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +IS++TGG+ + +INR LA AAEK +A+ +GSQR ++ + R+ AP + Sbjct: 60 MISAITGGHPASM-KINRELARAAEKLGIALGLGSQRAGVEHPELEGTYTIAREEAPSAM 118 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LI N+G+ + Y A +AV ++ AD L +HLNPLQE IQP G+ + + I+ + Sbjct: 119 LIGNIGSSHIEY------AERAVEMIDADALAVHLNPLQESIQPGGDVDSSGALESISAI 172 Query: 179 SSAMDVPLLLKEVGCGLSSMD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 ++DVP+++KE G G+ S D IEL G+ D+AG GGTSW+ +E++R + +G + Sbjct: 173 VESVDVPVMVKETGAGICSEDAIEL-ESCGVSAIDVAGAGGTSWAAVETYRADDRYLGEL 231 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT S +E+ IASGG+R+G+D K+I LGA + G+A P L+ A Sbjct: 232 FWDWGIPTAASTVEVVESVS--IPVIASGGIRSGIDAAKAISLGAEMVGIALPVLEAAGH 289 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V+ IE + +M+L G + + +L + +I Sbjct: 290 GYREVIKVIEGFNEALRTAMYLAGAETLDDLKKSPVII 327 >gi|330508371|ref|YP_004384799.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosaeta concilii GP-6] gi|328929179|gb|AEB68981.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosaeta concilii GP-6] Length = 365 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 20/338 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK+DHI I +P + FDD L+H+ALPEI ++D S FLG+KLS PL Sbjct: 3 TSSRKLDHIRICLDNPVESEGVVARSFDDLVLVHKALPEIDEADIDTSCRFLGRKLSAPL 62 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +IS+MTGG+ ++ IN NLA+AA + +AM VGSQR + + +F +R AP Sbjct: 63 MISAMTGGHPS-VKEINVNLALAASELGIAMGVGSQRAALEEESLKDTFSAVRDAAPDIP 121 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I N+GAVQL G Q ++ AD + +HLN LQE IQP G+ D S + +L Sbjct: 122 IIGNIGAVQLKRS-GPGILDQLAEMIDADAIAVHLNFLQESIQPEGDR---DASGVVKVL 177 Query: 179 SSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-------D 229 A + VP+++KE G G+S G++ D++G+GG SW+ +E++R D Sbjct: 178 GEAANGSVPIIVKETGAGISRETAASLADVGVKMIDVSGQGGLSWAGVETYRAAEIGDCD 237 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 LE ++G +F WGIPTP+S+ R + I+SGG+R+G+D+ KS+ LGASL G A P Sbjct: 238 LE-EMGRLFWSWGIPTPVSIVECRSIGLD--VISSGGIRSGLDVAKSLSLGASLAGTALP 294 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LKPA + AVV A+ + + MFL G +R EL Sbjct: 295 MLKPATKDAKAVVRAMSPYLRALRICMFLTGCRRAGEL 332 >gi|325958577|ref|YP_004290043.1| isopentenyl-diphosphate delta-isomerase [Methanobacterium sp. AL-21] gi|325330009|gb|ADZ09071.1| Isopentenyl-diphosphate delta-isomerase [Methanobacterium sp. AL-21] Length = 351 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 126/341 (36%), Positives = 196/341 (57%), Gaps = 15/341 (4%) Query: 1 MVNDRKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ ++CK+ ++ R K D LIH+ALPE++ E+D S++ LGKKL P Sbjct: 1 MISDRKLEHL-LLCKNCDVEYRKKTGLGDVELIHKALPEVNMKEIDLSIDLLGKKLDSPF 59 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +IS++TGG+ INR LA A+ + M VGSQR ++ + R+ AP Sbjct: 60 IISAITGGHPSAT-VINRTLARTAKILNIGMGVGSQRAAIKHPELTSTYTVVREEAPDAF 118 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LI N+G Q ++ A +++ ++ AD L +HLNPLQE IQP G+ + I + Sbjct: 119 LIGNIGCQQ------IELAQKSIEMIDADALAVHLNPLQEAIQPEGDVDARGHIESITEM 172 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++ P++ KE G G+ + D K+G+ D+AG GGTSW+ +E++R + +G F Sbjct: 173 TSTLETPIIAKETGAGIKAEDAITLEKAGVSAIDVAGSGGTSWAAVETYRAQDRTMGDAF 232 Query: 239 QDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWGIPT S C + I+SGG+R+G+D K+I LGA G+A P LK A Sbjct: 233 WDWGIPTAAS---TVEVCQSVKIPVISSGGIRSGLDAAKAIALGADAVGIALPLLKDAYS 289 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + VV I +E V+MFL+G + EL + +I+ + Sbjct: 290 GHEEVVNRINKFNEELRVAMFLVGASNIAELKKSDLIIKGE 330 >gi|222445001|ref|ZP_03607516.1| hypothetical protein METSMIALI_00617 [Methanobrevibacter smithii DSM 2375] gi|261350429|ref|ZP_05975846.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanobrevibacter smithii DSM 2374] gi|222434566|gb|EEE41731.1| hypothetical protein METSMIALI_00617 [Methanobrevibacter smithii DSM 2375] gi|288861212|gb|EFC93510.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanobrevibacter smithii DSM 2374] Length = 348 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 128/330 (38%), Positives = 202/330 (61%), Gaps = 13/330 (3%) Query: 1 MVNDRKIDHINIVCKDPGID-RNKKF-FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M++DRK++H+ ++CK+ ++ +NKK F+D LIH+ALPEI +E+D S GKKL P Sbjct: 1 MISDRKLEHL-LICKNYDVEFKNKKTGFEDVELIHKALPEIDKNEIDLSTSVFGKKLDSP 59 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 L I+++TGG+ + IN+ LAIAAE +A+ VGSQR ++ + R+ AP Sbjct: 60 LFITAITGGH-PAAKAINKQLAIAAESKNIALGVGSQRAAIEHPELADTYTVVRKNAPDC 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L+ N+GA QL+ A +AV +L AD L +HLNPLQE IQP G+ + I Sbjct: 119 LLVGNIGAPQLDL------ADKAVEILDADILAIHLNPLQESIQPEGDLDARGYLDSINQ 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 ++ +D+P++ KE GCG+S+ + + G+ Y DI G GGTSW+ +E++R + +G Sbjct: 173 ITKRVDIPVMAKETGCGISAEMAKQLVDVGVSYIDIEGAGGTSWAAVETYRAEDRYLGET 232 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT +S + + ++SGG+R+G++ K+I LGA G+A PFLK ++ S Sbjct: 233 FWDWGIPTAIST-VEVADAVDVPVVSSGGIRSGLEAAKAIALGADSVGMALPFLKHSV-S 290 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I+ ++MFL+G ++EL Sbjct: 291 EEQLTTFIDRFNDSLRIAMFLVGANNIEEL 320 >gi|13475331|ref|NP_106895.1| isopentenyl pyrophosphate isomerase [Mesorhizobium loti MAFF303099] gi|20978502|sp|Q989L5|IDI2_RHILO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14026083|dbj|BAB52681.1| mlr6371 [Mesorhizobium loti MAFF303099] Length = 351 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 16/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH++IV +DR W I H ALPE+ ++D LGK + P Sbjct: 11 RKDDHLDIV-----LDRRTAPATVAAGWEYIRFEHCALPELDLTQIDLRASLLGKTMRAP 65 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHT 117 LLISSMTGG + E INR+L+ AA+ +AM VGSQRV N+ + LR+ AP Sbjct: 66 LLISSMTGGVLRA-EAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRMAPDI 124 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 L++N+GA QL G+ A +AV L ADGL +HLN LQE +QP G+ ++ + ++IA Sbjct: 125 PLLANIGAAQLREADGLDLACRAVDALEADGLIVHLNALQEAVQPEGDRDWRGVLAQIAR 184 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDI 234 + ++DVP++ KEVG GLS+ +K+G+ D+AG GGTSW+ +E + + Sbjct: 185 AARSVDVPIVAKEVGSGLSASVACALVKAGVAVIDVAGAGGTSWAAVEGERARDAADRAV 244 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A Sbjct: 245 AMAFADWGIPTPASVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++AVVA E + ++ V+ F G+ + L Sbjct: 305 TVSTEAVVAHFEIVIRQLAVACFCTGSADLAAL 337 >gi|91205546|ref|YP_537901.1| isopentenyl pyrophosphate isomerase [Rickettsia bellii RML369-C] gi|122425613|sp|Q1RIK2|IDI2_RICBR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91069090|gb|ABE04812.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia bellii RML369-C] Length = 342 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 130/326 (39%), Positives = 194/326 (59%), Gaps = 4/326 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI I F+ +H ALPEI++ +D + FL K L P+LISSM Sbjct: 6 RKQDHIEINLTKNVESGLSSGFESVQFVHNALPEINYSSIDTTTTFLNKILQAPILISSM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN LA AA+K +AM +GS R + ++ + + +F +R AP VL++N+G Sbjct: 66 TGGTPRA-RDINCRLAAAAQKAGIAMGLGSMRTLLTEPSTLDTFTVRNNAPDIVLLANIG 124 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLNY ++ V + AD L LHLN LQE+ QP G+ N+ +L KI + + + V Sbjct: 125 AVQLNYGVTPKQCQYLVDSVKADALILHLNVLQELTQPEGDKNWENLLPKIKEVVNYLSV 184 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDW 241 P+++KEVG GLS + + G++ D+AG GGTSWS++E++R L++ I F +W Sbjct: 185 PVIIKEVGFGLSKKTAKQFIDIGVKILDVAGSGGTSWSQVEAYRATNSLQNRIASSFINW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT SL+M R + IASGGL++G+D K+I +GA + GLA PFLK A S + V Sbjct: 245 GIPTLDSLKMVREASKDISVIASGGLKSGIDGAKAIRMGADIFGLAGPFLKAADVSENLV 304 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 I+ + ++ ++M G++ + L Sbjct: 305 SEEIQLIIEQLKITMMCTGSRTINNL 330 >gi|170290629|ref|YP_001737445.1| isopentenyl pyrophosphate isomerase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174709|gb|ACB07762.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 360 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 142/342 (41%), Positives = 203/342 (59%), Gaps = 12/342 (3%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + N RK++HI I D + N ++FD LIH ALP+ SF+E + FLG +L PL Sbjct: 5 LTNRRKVEHIEIALSDDIDLSNNCRWFDFVRLIHNALPDSSFEETQLNWSFLGYELEAPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 LI MTGG+ + +IN LA AA+ +VA+ VGSQR D++ + ++ + R+ A Sbjct: 65 LIEGMTGGHEASL-KINEALARAAQSERVAIGVGSQRAALKDYSVVGTYRVVREIARDVP 123 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I+NLG + + GV A AV ++ AD + +HLNPLQE+IQP G+ NF+D + L Sbjct: 124 VIANLGISHILGEEGVDNAKAAVDMIDADAIAIHLNPLQELIQPEGDRNFSDSLISLRDL 183 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR----DLESD 233 +DVP+L+KEVG G+ S ++ L LK GI Y D+AG+GGTSW+ IE R +E + Sbjct: 184 VRELDVPVLVKEVGSGI-SYELSLTLKRIGIEYVDVAGQGGTSWALIEGKRAPSDSIERE 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I F +WGIPTP+S+ A + I SGG+R+G+D K I LGA G A PF K Sbjct: 243 ASIRFSEWGIPTPISIIEAS--SSGLTVIGSGGVRSGLDAAKCIALGAEAAGAARPFFKA 300 Query: 294 AMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++S +D V I S + E ++ FL G+ +L L A I Sbjct: 301 AIESGADGVSRKIRSFKFEMKLATFLTGSSTPDQLRLRRAYI 342 >gi|16330973|ref|NP_441701.1| isopentenyl pyrophosphate isomerase [Synechocystis sp. PCC 6803] gi|2829616|sp|P74287|IDI2_SYNY3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1653467|dbj|BAA18381.1| sll1556 [Synechocystis sp. PCC 6803] Length = 349 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 125/327 (38%), Positives = 194/327 (59%), Gaps = 5/327 (1%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI IV ++ + + F+ L H ALP + D VD + GK L++P LISS Sbjct: 7 RKSDHIRIVLEEDVVGKGISTGFERLMLEHCALPAVDLDAVDLGLTLWGKSLTYPWLISS 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + ++IN LA A+ +AM +GSQR + + ++++R AP +L +NL Sbjct: 67 MTGGTPEA-KQINLFLAEVAQALGIAMGLGSQRAAIENPDLAFTYQVRSVAPDILLFANL 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G VQLNY +G+++A +AV ++ AD L LHLNPLQE +QP+G+ ++ L SK+ L A++ Sbjct: 126 GLVQLNYGYGLEQAQRAVDMIEADALILHLNPLQEAVQPDGDRLWSGLWSKLEALVEALE 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVFQD 240 VP+++KEVG G+S + + G+ D+AG GGTSWS +E+HR + ++ F D Sbjct: 186 VPVIVKEVGNGISGPVAKRLQECGVGAIDVAGAGGTSWSEVEAHRQTDRQAKEVAHNFAD 245 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT SL+ + ASGG+R+G+D K+I LGA+L G A+P L A ++ Sbjct: 246 WGLPTAWSLQQVVQNTEQILVFASGGIRSGIDGAKAIALGATLVGSAAPVLAEAKINAQR 305 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ +E ++ F + +L Sbjct: 306 VYDHYQARLRELQIAAFCCDAANLTQL 332 >gi|89255375|ref|NP_659793.2| isopentenyl pyrophosphate isomerase [Rhizobium etli CFN 42] gi|89213329|gb|AAM54807.2| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CFN 42] Length = 377 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 197/333 (59%), Gaps = 16/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH+++V +DR W I H ALPE+ +++ LGK + P Sbjct: 31 RKDDHLDLV-----LDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAP 85 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHT 117 LLISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP Sbjct: 86 LLISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDI 144 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 L++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A Sbjct: 145 PLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVAR 204 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH--RDLESD-I 234 + ++ VP++ KEVG GLS+ +++G+ D+AG GGTSW+ +E RD + Sbjct: 205 AARSVGVPIVAKEVGWGLSASVACALVEAGVEVIDVAGAGGTSWAAVEGELARDAAGRAV 264 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + F DWGIPTP SL+ R + IASGG+R+GVD+ K+I LGA + G A+ L A Sbjct: 265 AMAFADWGIPTPASLQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAA 324 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++AVVA E + ++ V+ F G+ + L Sbjct: 325 TVSTEAVVAHFEVVIRQLAVACFCTGSPDLATL 357 >gi|260461765|ref|ZP_05810011.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium opportunistum WSM2075] gi|319785310|ref|YP_004144786.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032406|gb|EEW33671.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium opportunistum WSM2075] gi|317171198|gb|ADV14736.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 349 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 198/336 (58%), Gaps = 16/336 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKL 55 ++ RK DH++IV +DR + W I H ALPE+ ++D LGK + Sbjct: 6 LSRRKDDHLDIV-----LDRRTAPARVAAGWESIRFEHCALPELDLTQIDLRASLLGKTM 60 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYA 114 PLLISSMTGG + E INR+L+ AA+ +AM VGSQRV ++ + LR+ A Sbjct: 61 RAPLLISSMTGGMPRA-EAINRHLSEAAQSLGIAMCVGSQRVSLQSRSSQGLTRALRRLA 119 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 P L++N+GA QL G+ A +AV L ADGL +HLNPLQE +QP+G++++ + ++ Sbjct: 120 PDIPLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEAVQPDGDSDWRGVMAQ 179 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLE 231 IA + + VP++ KEVG GLS+ + +++G+ D+AG GGT W+ +E + Sbjct: 180 IARAARCVGVPIVAKEVGSGLSTSVACVLVEAGVAVIDVAGAGGTCWAAVEGERARDAAD 239 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + F DWGIPTP ++ R + IASGG+R+GVD+ K+I LGA + G A+ L Sbjct: 240 RAVALAFADWGIPTPAGVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVL 299 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A S++AVVA E + ++ V+ F G+ + L Sbjct: 300 RAATVSTEAVVAHFEIVIRQLAVACFCTGSADLAAL 335 >gi|284162659|ref|YP_003401282.1| isopentenyl-diphosphate delta-isomerase, type 2 [Archaeoglobus profundus DSM 5631] gi|284012656|gb|ADB58609.1| isopentenyl-diphosphate delta-isomerase, type 2 [Archaeoglobus profundus DSM 5631] Length = 359 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 135/331 (40%), Positives = 205/331 (61%), Gaps = 15/331 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DHI I C + ++ + F+D LIH+A+PEI FDE+D SV+FLGK++S P LI Sbjct: 10 TSKRKLDHIEI-CLNKEVESSYSGFEDVMLIHKAIPEIDFDEIDTSVDFLGKRISAPFLI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +S+TGG+ K IE IN+NLA A E + M VGSQR + ++SF + R++AP + Sbjct: 69 ASITGGHEKAIE-INKNLASAVEDLGLGMGVGSQRAGIEGGD-LESFTIVREFAPKAFVY 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G Q+ D V+ A +AV ++ AD L +HLN LQE IQP G+ I + Sbjct: 127 ANIGLPQVIRD--VEIAEKAVEMIDADALAIHLNYLQEAIQPEGDKFSRSAYDAIEEVCK 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR--DLESDIGIV 237 ++ VP+++KE G G+S I L LK+ G+ D+ G+GGTS+S +ES+R +++IG Sbjct: 185 SLKVPVIIKETGAGISR-GIALKLKAVGVSALDVGGKGGTSFSAVESYRCEGYKAEIGRD 243 Query: 238 FQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT S+ C + IA+GG+R+G+D+ K++ LGA +G A PFLK A++ Sbjct: 244 FWDWGIPTAYSI----VECYDILPVIATGGIRSGLDLAKALALGAVVGSSALPFLKRALE 299 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++V + V+MFL G + ++L Sbjct: 300 GVESVKELLRYYIDGLKVAMFLTGCRSCEDL 330 >gi|330962413|gb|EGH62673.1| isopentenyl pyrophosphate isomerase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 351 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 136/318 (42%), Positives = 187/318 (58%), Gaps = 6/318 (1%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH+NIV + G D H ALPE++ D++D L L PLLISS Sbjct: 9 RKDDHLNIVLEQRGAGSGAVTGLDAVQFEHCALPELNLDDIDLRSALLHMPLRAPLLISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISN 122 MTGG + INRNLAIAA++ +AM VGSQRV + S ++ + ELR+ AP L+SN Sbjct: 69 MTGGAERSTV-INRNLAIAAQELGMAMGVGSQRVGLRSPNDQGLTRELRRLAPGVPLLSN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA QL G+ A +AV L AD L +HLNPLQE +Q G+ + + + IA ++ Sbjct: 128 IGAAQLLEADGLDLARRAVDALQADALIIHLNPLQEAVQAEGDRQWQGVLNTIARTVESV 187 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVFQ 239 VP+++KEVG GLS+ L G+R D+AG+GGTSW+ +E+ R + ++ + F Sbjct: 188 GVPVIVKEVGAGLSAEVASLLAGVGVRVIDVAGKGGTSWAAVEAGRATSAADREVAMAFA 247 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT SL R + IASGG+RNGVD K+I LGA L G A+ L AM SS Sbjct: 248 DWGIPTATSLINVRKALPDITLIASGGIRNGVDAAKAIRLGADLVGQAAGVLNEAMLSSS 307 Query: 300 AVVAAIESLRKEFIVSMF 317 AV+ E + ++ ++ F Sbjct: 308 AVIEHFEIIIRQLRIACF 325 >gi|157827262|ref|YP_001496326.1| isopentenyl pyrophosphate isomerase [Rickettsia bellii OSU 85-389] gi|166226206|sp|A8GWR2|IDI2_RICB8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157802566|gb|ABV79289.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia bellii OSU 85-389] Length = 343 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 4/326 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI I F+ +H ALPEI++ +D + FL K L P+LISSM Sbjct: 6 RKQDHIEINLTKNVESGLSSGFESVQFVHNALPEINYSSIDTTTTFLNKILQAPILISSM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN LA AA+K +AM +GS R + ++ + + +F +R AP VL++N+G Sbjct: 66 TGGTPRA-RDINCRLAAAAQKAGIAMGLGSMRTLLTEPSTLDTFTVRNNAPDIVLLANIG 124 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLNY ++ V + AD L LHLN LQE+ QP G+ N+ +L KI + + + V Sbjct: 125 AVQLNYGVTPKQCQYLVDSVKADALILHLNVLQELTQPEGDKNWENLLPKIKEVVNYLSV 184 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDW 241 P+++KEVG GLS + + G++ D+AG GGTSWS++E++R L++ I F +W Sbjct: 185 PVIIKEVGFGLSKKTAKQFIDIGVKILDVAGSGGTSWSQVEAYRATNSLQNRIASSFINW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT SL+M R + IASGGL++G+D K+I +GA + GLA PFLK A S + V Sbjct: 245 GIPTLDSLKMVREASKDISVIASGGLKSGIDGAKAIRMGADIFGLAGPFLKAADVSENLV 304 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 I+ + ++ ++M G+ + L Sbjct: 305 SEEIQLIIEQLKITMMCTGSHTINNL 330 >gi|284167369|ref|YP_003405647.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haloterrigena turkmenica DSM 5511] gi|284017024|gb|ADB62974.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haloterrigena turkmenica DSM 5511] Length = 360 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 138/337 (40%), Positives = 202/337 (59%), Gaps = 18/337 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DHI IV ++ ++ F+D L+H ALPE+ +D +D SVEFL +LS P+ I Sbjct: 9 TEDRKDDHIRIV-QERDVETTGTGFEDVQLVHEALPELHYDAIDTSVEFLDHELSAPIFI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTV 118 SMTGG+ E INR LA AA +T +AM +GSQR + D+ ++S+ + R AP Sbjct: 68 ESMTGGHQNTTE-INRALARAAGETGIAMGLGSQRAGLELDDNGVLESYTVVRDAAPDAF 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + D + I + Sbjct: 127 IYGNLGAAQLR-EYDLETVERAVEMIEADALAVHLNFLQEAVQPEGDVDGRDCLAAIKRV 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ES 232 + VP+++KE G G+S + G+ D+AG+GGT+WS IE++R + Sbjct: 186 VEDLSVPIIVKETGNGISGETARKLSEVGVDAIDVAGKGGTTWSGIEAYRAAAANAPRQK 245 Query: 233 DIGIVFQDWGIPTPLSLE--MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IG +F++WGIPT S +A C IASGG+R G+D+ K+I LGA GGLA PF Sbjct: 246 RIGALFREWGIPTAASTTECVAEHDC----VIASGGVRTGLDVAKAIALGALAGGLAKPF 301 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PA + SDAV+ +E L E +MF+ G+K + +L Sbjct: 302 LNPATNGSDAVIERVEDLIAELRTAMFVTGSKSIPDL 338 >gi|94985481|ref|YP_604845.1| isopentenyl pyrophosphate isomerase [Deinococcus geothermalis DSM 11300] gi|94555762|gb|ABF45676.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Deinococcus geothermalis DSM 11300] Length = 346 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 126/330 (38%), Positives = 189/330 (57%), Gaps = 18/330 (5%) Query: 5 RKIDHINIVCKDP---------GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 RK+ H+ C P G++R W +RALPE+ + VD + FLG++L Sbjct: 17 RKLRHLE-ACLRPESQYMGVTTGLERVP-----WP--YRALPELDLEAVDLTTTFLGRRL 68 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 P+LI +MTGG + E INRNLA AAE+ + M +GSQRVM A SF +R AP Sbjct: 69 RAPVLIGAMTGGAQRA-EVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSFRVRDVAP 127 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 +L+ NLGA Q +GV +A +AV + ADGL +HLNPLQE +Q G+T + L++++ Sbjct: 128 GVLLLGNLGAAQFLLGYGVAEAERAVRAVEADGLAIHLNPLQEAMQAGGDTRWRGLAARL 187 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 A + A+ P++LKEVG GL ++ +G D+AG GGTSW+R+E + + Sbjct: 188 AEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLVRYGAVLA 247 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + G+PT ++ AR IASGG+R G+D +++ LGA + +A P L PA+ Sbjct: 248 PDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVARPLLAPAL 307 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +S+ AV A + E V++F+ G + V+ Sbjct: 308 ESAAAVEAWLARFIHELRVALFVGGFRSVE 337 >gi|327400498|ref|YP_004341337.1| Isopentenyl-diphosphate delta-isomerase [Archaeoglobus veneficus SNP6] gi|327316006|gb|AEA46622.1| Isopentenyl-diphosphate delta-isomerase [Archaeoglobus veneficus SNP6] Length = 358 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 132/331 (39%), Positives = 198/331 (59%), Gaps = 15/331 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 ++RK+DHI I C + ++ + F+D L+H ALPE+ F+E+D SVE GKKLS P +I+ Sbjct: 4 SNRKLDHIRI-CLEEEVESSYTGFEDIMLVHNALPEVDFEEIDTSVEMFGKKLSAPFIIA 62 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 SMTGG+ E INRNLAIA E+ + M VGSQR D SF +R AP+ + + Sbjct: 63 SMTGGHPDTKE-INRNLAIAVEELGLGMGVGSQRAAIEDEKLADSFTVVRDAAPNAFIYA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+ ++ +AV ++ AD + +HLN LQE+IQP G+ + I + A Sbjct: 122 NVGVAQVKQS--IEFVEKAVEMIDADAVAIHLNFLQEVIQPEGDVDAKGCIEAIKEVCEA 179 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP+++KE G G+S + L LK G+ D+ G+GGTSWS +E +R + ++G+ Sbjct: 180 VKVPVIVKETGAGISR-SVALKLKEVGVEAIDVGGKGGTSWSGVEVYRTSDIIAKNVGLD 238 Query: 238 FQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT S+ C + IA+GG+R+G+D K+I +GA A PFL+PA Sbjct: 239 FWDWGIPTAFSV----VECGDVLPTIATGGIRSGLDAAKAIAIGAFAASAALPFLRPATQ 294 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++ V +E V+MFL G ++++EL Sbjct: 295 SAEEVKLELEYFLHGLKVAMFLTGCQKIEEL 325 >gi|302383385|ref|YP_003819208.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas subvibrioides ATCC 15264] gi|302194013|gb|ADL01585.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas subvibrioides ATCC 15264] Length = 342 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 123/330 (37%), Positives = 185/330 (56%), Gaps = 5/330 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + DRK H+++V G FD +H ALP++ ++D ++FLG++L PLLI Sbjct: 6 ITDRKDQHLDVVLAGGGRHARDAGFDAVRFVHEALPDLDHGKIDLGIDFLGRRLQAPLLI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN +LA AA+ +A+AVGSQR + LR AP T ++ Sbjct: 66 SSMTGGPARA-EAINAHLAEAAQALGIALAVGSQRAALEGGGGGGLNQSLRDRAPDTPIL 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA QL FGV +A + + ++GAD L +HLNPLQE QP G+ ++ + + + L Sbjct: 125 ANIGAAQLTRGFGVDEARRIIDMIGADALIVHLNPLQEACQPEGDRDWWGVGAALEALIR 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP+++KE G G+S+ G+ D+AG GG +W IE R + + Sbjct: 185 KLGVPVIVKETGAGISAATARRLFAMGVAGVDVAGAGGANWGLIEGERATDQADKAHALA 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGI T ++E R C ++ I SGG+R+GVD K+I LGA L G A+ L A S Sbjct: 245 FADWGISTARAIETVREACPDSLIIGSGGVRDGVDAAKAIRLGADLVGQAAGVLVAATQS 304 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++AVV + + ++ S F G+ + EL Sbjct: 305 TEAVVEHFQIVIRQLRTSCFCTGSSNLVEL 334 >gi|260599332|ref|YP_003211903.1| isopentenyl pyrophosphate isomerase [Cronobacter turicensis z3032] gi|260218509|emb|CBA33695.1| Isopentenyl-diphosphate delta-isomerase [Cronobacter turicensis z3032] Length = 347 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 193/331 (58%), Gaps = 6/331 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE+S D++D S G+ + PLL Sbjct: 6 LSQRKNDHLDIVLHPERAKQTVRTGFEQWRFEHCALPELSLDDIDLSTRLFGRAMKAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV S+ N + ELRQYAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRQYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVDMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIERVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R + ++ + Sbjct: 185 NALPVPVVVKEVGAGLSVPVARQLKEAGVAMLDVAGAGGTSWAAVEGERAASTHARNVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GA+L G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDAAKALAMGATLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ AV+ + ++ V+ F G+ + L Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASLSAL 335 >gi|156932565|ref|YP_001436481.1| isopentenyl pyrophosphate isomerase [Cronobacter sakazakii ATCC BAA-894] gi|166226197|sp|A7MPA0|IDI2_ENTS8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156530819|gb|ABU75645.1| hypothetical protein ESA_00346 [Cronobacter sakazakii ATCC BAA-894] Length = 347 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 192/331 (58%), Gaps = 6/331 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE++ D++D S G+ + PLL Sbjct: 6 LSQRKNDHLDIVLHPERAKQTIRTGFEQWRFEHCALPELALDDIDLSTRLFGRVMKAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV S+ N + ELR+YAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRRYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVEMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIKRVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R D + + Sbjct: 185 NALSVPVVVKEVGAGLSVPVARQLAEAGVTMLDVAGAGGTSWAAVEGERAASDHARSVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GASL G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDTAKALAMGASLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ AV+ + ++ V+ F G+ + L Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASLSAL 335 >gi|310644403|ref|YP_003949162.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus polymyxa SC2] gi|309249354|gb|ADO58921.1| Isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus polymyxa SC2] Length = 366 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 130/341 (38%), Positives = 182/341 (53%), Gaps = 11/341 (3%) Query: 2 VNDRKIDHINIVCKDP----GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 +RKI+H+ + ++ GI + + H ALPE+ FDEV +F+G+ + Sbjct: 26 TGERKIEHVRLCLQEDVAGHGITSG---LERYSFKHCALPELHFDEVRLDTKFMGRTVRT 82 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PLLISSMTGG+ + IN LA AE+ A+ VGS R +F +R+ AP Sbjct: 83 PLLISSMTGGSAE-TGAINERLAETAERRGWALGVGSVRAAVEKEELASTFAVRRLAPSI 141 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +++NLGAVQLNY FGV +AV + GAD L LHLN LQEI QP GN +F+ L +I Sbjct: 142 PILANLGAVQLNYGFGVDDCQRAVEIAGADMLVLHLNGLQEIFQPEGNLDFSGLLERIEE 201 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDI 234 L + VP+ +KEVG G+ +G + D+AG GGTSWS++E R+ + Sbjct: 202 LCHRLSVPVGVKEVGWGIDGETASRLYDAGAAFIDVAGAGGTSWSQVEKFRNPDPVRRAA 261 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F DWG T + R I SGGL+NGVD K++ LGA + G L A Sbjct: 262 AEAFADWGNSTADCIVEVRAAQPNGTLIGSGGLKNGVDAAKALALGADMAGFGRSLLGSA 321 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + SS+A+ A +E + E MF +G ++ L T L R Sbjct: 322 VTSSEALEARLEQVELELRTVMFGIGVAEIEGLKDTTRLRR 362 >gi|112702898|emb|CAL34118.1| isopentenyl pyrophosphate isomerase IDI [Cronobacter sakazakii] Length = 347 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 126/331 (38%), Positives = 192/331 (58%), Gaps = 6/331 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE++ D++D S G+ + P+L Sbjct: 6 LSQRKNDHLDIVLHPERAKQTIRTGFEQWRFEHCALPELALDDIDLSTRLFGRVMKAPIL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV S+ N + ELR+YAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRRYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVEMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIKRVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R D + + Sbjct: 185 NALSVPVVVKEVGAGLSVPVARQLAEAGVTMLDVAGAGGTSWAAVEGERAASDHARSVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GASL G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDTAKALAMGASLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ AV+ + ++ V+ F G+ + L Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASISAL 335 >gi|154248055|ref|YP_001419013.1| isopentenyl pyrophosphate isomerase [Xanthobacter autotrophicus Py2] gi|226707324|sp|A7IMW3|IDI2_XANP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154162140|gb|ABS69356.1| isopentenyl-diphosphate delta-isomerase, type 2 [Xanthobacter autotrophicus Py2] Length = 343 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 130/327 (39%), Positives = 183/327 (55%), Gaps = 5/327 (1%) Query: 5 RKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI+IV + R FD +H ALPE+ D +D S FLG+ L P LIS+ Sbjct: 9 RKEDHIDIVLAGGRVASRLDAGFDRVRFVHCALPELDLDAIDLSTRFLGRPLKAPFLISA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISN 122 MTGG + E IN +LA AA+ +A+ VGSQR+ D +A +LR+ AP L +N Sbjct: 69 MTGGPARA-ESINAHLAEAAQALGIALGVGSQRIAIEDGSAGGLGADLRRRAPDIALFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA QL G+ A +AV ++GAD L +HLNPLQE IQ G+ ++ + +I L ++ Sbjct: 128 LGAAQLLAARGLDAARRAVEMIGADVLVIHLNPLQEAIQQGGDRDWRGVFDRIGSLCVSL 187 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL--ESDIGIVFQD 240 P+++KEVG GLS G+ D+AG GGT+W+ +E R + F D Sbjct: 188 SAPVVVKEVGFGLSGAVARRLADCGVAALDVAGAGGTNWALVEGERGTGRSRAVATAFAD 247 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT ++ R C + IASGG+R+GVD K+I LGA L G A+ LK A+ S++A Sbjct: 248 WGIPTAQAVVEVRAACPDLPLIASGGVRHGVDAAKAIRLGADLVGQAAGTLKAAITSTEA 307 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VV + + ++ F G + L Sbjct: 308 VVEHFSQMTDQLRIACFATGAADLDAL 334 >gi|282164307|ref|YP_003356692.1| isopentenyl-diphosphate delta-isomerase [Methanocella paludicola SANAE] gi|282156621|dbj|BAI61709.1| isopentenyl-diphosphate delta-isomerase [Methanocella paludicola SANAE] Length = 357 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 194/336 (57%), Gaps = 19/336 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+H++I C ++ D +HR LPEI+ +VD FLG K S PL+I Sbjct: 3 TSKRKIEHLDI-CTRENVESKDNGLSDVEFVHRCLPEINRADVDSRTTFLGHKFSAPLMI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ E +N NLA+AAE+ + + VGSQR D S+ + R+ AP+ + Sbjct: 62 ASMTGGHPGTTE-VNANLAMAAEQLGLGLGVGSQRAALEDRKLEDSYRIVREKAPNAFIY 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GA QL D+ + +AV ++ AD + +HLN LQE IQP GN + + KIA +++ Sbjct: 121 GNIGAPQL-ADYTIDDVERAVEMIDADAMAIHLNFLQEAIQPEGNVDARGIIEKIAGIAA 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 + VP+++KE G G+ MD L K+G+ D+ GRGGTSW+ +E R ++ + Sbjct: 180 ELSVPVIVKETGAGICHMDAYLLKKAGVAAIDVGGRGGTSWAGVEVFRARMELDEVSEHL 239 Query: 235 GIVFQDWGIPTPLSL---EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G+ F DWGIPT +SL ++ P +A+GG+R+GV + K++ LGAS+ +A P + Sbjct: 240 GMKFWDWGIPTAVSLVEADIGLP------LVATGGIRDGVMMAKAMALGASMSSVALPLV 293 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V +E +E MFL G++ V+++ Sbjct: 294 SAARIGPEKVKKMLELYIEELKAVMFLTGSRSVEDI 329 >gi|327482514|gb|AEA85824.1| isopentenyl pyrophosphate isomerase [Pseudomonas stutzeri DSM 4166] Length = 346 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 8/323 (2%) Query: 5 RKIDHINIVCKDP--GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV DP I F + H ALPE+ D++D G++L PLLIS Sbjct: 9 RKNDHLDIVL-DPTRAIAATGTGFGAFRFEHCALPELHLDQIDLQTALFGRRLRAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVLIS 121 SMTGG + IN +LA AA++ +AMAVGSQRV + + + +LRQ AP +L++ Sbjct: 68 SMTGGAARSAA-INAHLAEAAQQLGIAMAVGSQRVALETAGDQGLTGQLRQLAPDILLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N GA QL +GV +A +AV ++ D L +HLNPLQE +Q G+ ++ + I L++ Sbjct: 127 NFGAAQLVRGYGVDEARRAVEMIEGDALIVHLNPLQEAVQTGGDRDWRGVLQAIEALAAR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + I F Sbjct: 187 LPVPVVIKEVGAGISAAVARRLVDAGVAAIDVAGAGGTSWAAVEAARAADASQQAIAEAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L R C IASGG+R+GV+ K+I LGA L G A+ L+ AM SS Sbjct: 247 ADWGIPTAQALLAVREACPNTPLIASGGIRDGVEAAKAICLGADLVGQAAGVLQAAMRSS 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGT 321 +AVV+ E L ++ ++ F G+ Sbjct: 307 EAVVSHFEVLIEQLRIACFCTGS 329 >gi|298674296|ref|YP_003726046.1| isopentenyl-diphosphate delta-isomerase [Methanohalobium evestigatum Z-7303] gi|298287284|gb|ADI73250.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalobium evestigatum Z-7303] Length = 358 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 196/334 (58%), Gaps = 20/334 (5%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RKI+H+N P R K FDD LIHRALPE++ DE+D S FLGK S P +I+S Sbjct: 6 RKIEHLNFCAHSPVESRKKGSGFDDITLIHRALPEVNMDEIDLSTRFLGKDFSAPFMIAS 65 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 +TGG+ I +NR LA A E+ V + VGSQR D +SF +R AP+ + N Sbjct: 66 ITGGHEDTIP-VNRALAKAVEEMGVGIGVGSQRAAIEDPAQEESFRVVRDEAPNAFIYGN 124 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA Q+ ++GV+ + V ++ AD + +HLN LQE +QP G+ + + I+ ++S + Sbjct: 125 VGAAQIK-EYGVEVVEKLVDMIDADAMAVHLNFLQEAVQPEGDRDASGTLEAISEITS-L 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLESD-IGI 236 ++P++ KE G G+S D L +G+ D+ G GGTSWS +E +R DL S +G Sbjct: 183 NIPVIAKETGAGISHEDAVLLKNAGVSAIDVGGVGGTSWSGVEFYRAKDRNDLRSQLLGE 242 Query: 237 VFQDWGIPTP---LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +F D GIPT + +++ P IA+GG+R+G+DI KS+ +GA + A PF++P Sbjct: 243 IFWDHGIPTASDLIECDVSLP------LIATGGIRSGLDIAKSVTMGADVASAALPFVEP 296 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V+ + + + VSMFL G K V +L Sbjct: 297 ALKNEQEVINTLSNFIYQLKVSMFLCGCKTVSDL 330 >gi|72536081|gb|AAZ73146.1| isopentenyl pyrophosphate isomerase [Enterobacteriaceae bacterium DC413] Length = 344 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/332 (37%), Positives = 195/332 (58%), Gaps = 7/332 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH++IV ++ F WH H ALPE+ D++D + + P LI Sbjct: 6 LTKRKNDHLDIVLRNTAPASGS--FARWHFTHCALPELHLDQIDLRTRLFDRPMQAPFLI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVLI 120 SSMTGG + + IN +LA AA+ +A+ VGSQRV SD+++ + +LR+ AP L+ Sbjct: 64 SSMTGGAARALS-INHHLAEAAQTLGLALGVGSQRVALESDNDSGLTRDLRRIAPDIPLL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA Q+ + G + A AV ++ AD L +HLNPLQE +Q G+ ++ + IA L Sbjct: 123 ANLGAAQILGEQGRRLARNAVSMIEADALIVHLNPLQEALQRGGDRDWRGVLQAIAQLVK 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 +++VP+++KEVG G+S+ + ++G+ DIAG GGTSW+ +E R + + + Sbjct: 183 SLEVPVVVKEVGAGISAEVAQRLAEAGVSMIDIAGAGGTSWAAVEGERASTPQQRAVAMA 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +L R IASGG+R+G+D K++ LGA + G A+ L A+ S Sbjct: 243 FASWGIPTDEALRAVRDRLPAIPLIASGGIRDGIDAAKALRLGADIVGQAAAVLSSALHS 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +DAVVA +L ++ V+ F G+ +++L L Sbjct: 303 TDAVVAHFNTLIEQLRVACFCTGSANLRQLRL 334 >gi|122065240|sp|Q9RVE2|IDI2_DEIRA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 338 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/331 (37%), Positives = 194/331 (58%), Gaps = 10/331 (3%) Query: 2 VNDRKIDHINIVCKDP--GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK+ H+ C P + K D +RALPE + +E+ FLG++L P+ Sbjct: 10 IETRKLRHLE-ACLRPESQYQKVKTGLDSVPWPYRALPESNLEEMRLDTVFLGRRLKAPV 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LI +MTGG K INRNLA AA + M +GSQRVM +A +SF +R+ AP +L Sbjct: 69 LIGAMTGGAEKA-GVINRNLATAARNLGLGMMLGSQRVMLEHPDAWESFNVREVAPEILL 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I NLGA Q +G ++A +AV + AD L +HLNPLQE +Q G+T + ++ ++ ++ Sbjct: 128 IGNLGAAQFMLGYGAEQARRAVDEVMADALAIHLNPLQEALQRGGDTRWQGVTYRLKQVA 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE---SHRDLESDIGI 236 +D P+++KEVG GL + + +D+AG GGTSW+R+E +H + S Sbjct: 188 RELDFPVIIKEVGHGLDAATLRALADGPFAAYDVAGAGGTSWARVEQLVAHGQVHSPD-- 245 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 + G+PT +L AR AQ IASGG+R+G+D +++ LGA + +A P L+PA+D Sbjct: 246 -LCELGVPTAQALRQARKTLPGAQLIASGGIRSGLDAARALSLGAEVVAVARPLLEPALD 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 SS+A A + + +E V++F+ G + V+E+ Sbjct: 305 SSEAAEAWLRNFIQELRVALFVGGYRDVREV 335 >gi|146284188|ref|YP_001174341.1| isopentenyl pyrophosphate isomerase [Pseudomonas stutzeri A1501] gi|166226202|sp|A4VR98|IDI2_PSEU5 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145572393|gb|ABP81499.1| isopentenyl-diphosphate delta-isomerase [Pseudomonas stutzeri A1501] Length = 346 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 8/323 (2%) Query: 5 RKIDHINIVCKDP--GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV DP I F + H ALPE+ D++D G++L PLLIS Sbjct: 9 RKNDHLDIVL-DPTRAIAATGTGFGAFRFEHCALPELHLDQIDLQTALFGRRLRAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVLIS 121 SMTGG + IN +LA AA++ +AMAVGSQRV + + + +LRQ AP +L++ Sbjct: 68 SMTGGAARSAA-INAHLAEAAQQLGIAMAVGSQRVALETAGDQGLTGQLRQLAPDILLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N GA QL +GV +A +AV ++ D L +HLNPLQE +Q G+ ++ + I L++ Sbjct: 127 NFGAAQLVRGYGVDEARRAVEMIEGDALIVHLNPLQEAVQTGGDRDWRGVLQAIEALAAR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + I F Sbjct: 187 LPVPVVIKEVGAGISAAVARRLVDAGVAAIDVAGAGGTSWAAVEAARAADASQQAIAEAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L R C IASGG+R+GV+ K+I LGA L G A+ L+ AM SS Sbjct: 247 ADWGIPTAQALLAVRDACPNTPLIASGGIRDGVEAAKAICLGADLVGQAAGVLQAAMHSS 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGT 321 +AVV+ E L ++ ++ F G+ Sbjct: 307 EAVVSHFEVLIEQLRIACFCTGS 329 >gi|90420015|ref|ZP_01227924.1| putative dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90336056|gb|EAS49804.1| putative dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 356 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/322 (38%), Positives = 185/322 (57%), Gaps = 6/322 (1%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH++IV R H ALPEIS E+D S +FLG++L PLLISS Sbjct: 16 RKSDHLDIVLHPSLAARRADSGLSQIVFEHVALPEISLAEIDLSTQFLGRRLEAPLLISS 75 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISN 122 MTGG + RINRNLA AA+ +A AVGSQR+ + +LR AP+ +++N Sbjct: 76 MTGGPERA-ARINRNLAEAAQALGIAFAVGSQRIAIEGRASGGLDRQLRDAAPNVPILAN 134 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA QL +G+ + +AV ++ AD L +HLNPLQE +Q G+TN+ + + I L+ + Sbjct: 135 VGAAQLVLGYGLAEVRRAVDMIDADALIVHLNPLQEAVQSGGDTNWRGVLAAIGELARLL 194 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQ 239 VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + + F Sbjct: 195 PVPIVVKEVGAGISATVARRLVDAGVHAIDVAGAGGTSWAAVEAERSPDPAQCATALTFS 254 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGI T ++ R C + I SGG+R+G+D K+I LGA L G A+ L A S + Sbjct: 255 DWGISTARAIVDVRAACPQTVVIGSGGIRDGLDAAKAIRLGADLAGQAAASLGSADASPE 314 Query: 300 AVVAAIESLRKEFIVSMFLLGT 321 A VA + + + ++ F G+ Sbjct: 315 AAVAHFQQVIAQLRIACFCTGS 336 >gi|298243367|ref|ZP_06967174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ktedonobacter racemifer DSM 44963] gi|297556421|gb|EFH90285.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ktedonobacter racemifer DSM 44963] Length = 378 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 126/341 (36%), Positives = 198/341 (58%), Gaps = 19/341 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 V RKI+H+NI + + ++D L+H+ALPE+ D VD SVEFLG++L +PL I Sbjct: 5 VKQRKIEHVNIALERDVSAPQQANWNDIRLVHQALPEVDLDAVDTSVEFLGQRLRYPLFI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SS+TGG+ ++ INRNLA AAE+ +A+ VGSQR + SF + R+ APH LI Sbjct: 65 SSLTGGHPDVL-MINRNLARAAEEYGLALGVGSQRAAIVNPEVSDSFAVTREQAPHAFLI 123 Query: 121 SNLGAVQL-----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 +N+GA QL + F +++ +A ++GA+ L +H+N LQE QP G+ + Sbjct: 124 ANIGAPQLIAQERHAPFTIEQVQRATAMIGANALAIHMNSLQEAAQPEGDRRAFGEVEAL 183 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------D 229 L +++P++ KE G G++ + G+ D+ G GG+S S +E+ R + Sbjct: 184 RKLVPQLELPVIAKETGAGVNREQALILRSCGVSAIDVGGAGGSSMSALEAFRSQSRGDE 243 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQ--FIASGGLRNGVDILKSIILGASLGGLA 287 IG +++DWGIPTP+++ C A+ I++GG+RNG+D +++ LGASL G+ Sbjct: 244 QTMRIGALYRDWGIPTPIAV----VECGVARLPLISTGGVRNGLDAARALSLGASLVGMG 299 Query: 288 SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 PFLK A +AV ++ E V+M L G +Q+L+ Sbjct: 300 FPFLKAASQGYEAVCELLQGFIAELKVAMQLSGAASIQQLH 340 >gi|261409700|ref|YP_003245941.1| isopentenyl pyrophosphate isomerase [Paenibacillus sp. Y412MC10] gi|261286163|gb|ACX68134.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. Y412MC10] Length = 370 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 129/339 (38%), Positives = 176/339 (51%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 +RKI+H+ + C D + F+ + H ALPEI F E+ FL + P Sbjct: 33 TGERKIEHVRL-CLDEEVGSVGVTTGFERYRFRHAALPEIDFGEIKLDTTFLDFSVRTPF 91 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG+ K IN LA AAE+ A+ VGS R +F +R+ AP + Sbjct: 92 LISSMTGGS-KATGEINMRLAEAAERRGWALGVGSVRAAVEKEELASTFRVRESAPSVPV 150 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+NLGAVQLNY FG+ +AV + GAD L LHLN LQE+ QP GNT F L +I L Sbjct: 151 IANLGAVQLNYGFGLDDCQRAVDIAGADMLVLHLNGLQEVFQPEGNTRFGRLLGRIEDLC 210 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGI 236 + +P+ +KEVG G+ + L G + D+AG GGTSWS++E R + Sbjct: 211 RTLSIPVGIKEVGWGIDGETAQTLLDVGAAFIDVAGAGGTSWSQVEKFRSPDPVRRAAAE 270 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WG PT + R I SGGL++GVD K++ LGA L G L A+D Sbjct: 271 AFAGWGNPTAECIAEVREAAPACALIGSGGLQSGVDAAKALALGADLAGFGRGLLGSAVD 330 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S +A+ + + E +MF +G ++ L LIR Sbjct: 331 SVEALDQRLAQVELELRTAMFGIGAGNIEALKSTRRLIR 369 >gi|11499868|ref|NP_071112.1| isopentenyl pyrophosphate isomerase [Archaeoglobus fulgidus DSM 4304] gi|2648236|gb|AAB88970.1| carotenoid biosynthetic gene ERWCRTS, putative [Archaeoglobus fulgidus DSM 4304] Length = 317 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 122/301 (40%), Positives = 184/301 (61%), Gaps = 9/301 (2%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 LIH+ALPE+ + ++D +EF GKKLSFPLLI+SMTGG+ + E IN L A E+ + M Sbjct: 3 LIHKALPEVDYWKIDTEIEFFGKKLSFPLLIASMTGGHPETKE-INARLGEAVEEAGIGM 61 Query: 91 AVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 VGSQR D + SF + R+ AP+ + +N+G Q+ + GV+ +AV ++ AD + Sbjct: 62 GVGSQRAAIEDESLADSFTVVREKAPNAFVYANIGMPQV-IERGVEIVDRAVEMIDADAV 120 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +HLN LQE IQP G+ N + + ++ VP++ KE G G+S + ++G+ Sbjct: 121 AIHLNYLQEAIQPEGDLNAEKGLEVLEEVCRSVKVPVIAKETGAGISREVAVMLKRAGVS 180 Query: 210 YFDIAGRGGTSWSRIESHR---DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 D+ G+GGT++S +E +R ++ +GI F DWG+PT S+ R IA+GG Sbjct: 181 AIDVGGKGGTTFSGVEVYRVNDEVSKSVGIDFWDWGLPTAFSIVDCRGIL---PVIATGG 237 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LR+G+D+ KSI +GA LG A PFL+ A++S++ V IE R+ +MFL G K V+E Sbjct: 238 LRSGLDVAKSIAIGAELGSAALPFLRAAVESAEKVREEIEYFRRGLKTAMFLTGCKNVEE 297 Query: 327 L 327 L Sbjct: 298 L 298 >gi|1723373|sp|Q01335|IDI2_ESCVU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148409|gb|AAA64978.1| unknown [Pantoea agglomerans] Length = 347 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 130/329 (39%), Positives = 189/329 (57%), Gaps = 8/329 (2%) Query: 5 RKIDHINIVCKDP--GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV DP + + F+ W H ALPE++F ++ FL ++L PLLIS Sbjct: 9 RKNDHLDIVL-DPRRAVTQASAGFERWRFTHCALPELNFSDITLETTFLNRQLQAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVLIS 121 SMTGG + INR+LA AA+ K+AM VGSQRV SD LRQ AP L++ Sbjct: 68 SMTGGVERS-RHINRHLAEAAQVLKIAMGVGSQRVAIESDAGLGLDKTLRQLAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA QL G+ A +AV ++ AD L +HLNPLQE +QP G+ ++ + I L Sbjct: 127 NLGAAQLTGRKGIDYARRAVEMIEADALIVHLNPLQEALQPGGDRDWRGRLAAIETLVRE 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VPL++KEVG G+S + +G+ D+AG GGTSW+ +E R + + + VF Sbjct: 187 LPVPLVVKEVGAGISRTVAGQLIDAGVTVIDVAGAGGTSWAAVEGERAATEQQRSVANVF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG++NGVD K++ LGA + G A+ L A S+ Sbjct: 247 ADWGIPTAEALVDIAEAWPQMPLIASGGIKNGVDAAKALRLGACMVGQAAAVLGSAGVST 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + ++ V+ F G++ + +L Sbjct: 307 EKVIDHFNVIIEQLRVACFCTGSRSLSDL 335 >gi|329929031|ref|ZP_08282833.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. HGF5] gi|328937020|gb|EGG33449.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. HGF5] Length = 370 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 129/339 (38%), Positives = 176/339 (51%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 +RKI+H+ + C D + F+ + H ALPEI F E+ FL + P Sbjct: 33 TGERKIEHVRL-CLDEEVGSVGVTTGFERYRFRHAALPEIDFGEIKLDTTFLDFSVRTPF 91 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG+ K IN LA AAE+ A+ VGS R +F +R+ AP + Sbjct: 92 LISSMTGGS-KATGEINMRLAEAAERRGWALGVGSVRAAVEKEELASTFRVRESAPSVPV 150 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+NLGAVQLNY FG+ +AV + GAD L LHLN LQE+ QP GNT F L +I L Sbjct: 151 IANLGAVQLNYGFGLDDCQRAVDIAGADMLVLHLNGLQEVFQPEGNTRFGRLLGRIEDLC 210 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGI 236 + +P+ +KEVG G+ L G + D+AG GGTSWS++E R + Sbjct: 211 RTLSIPVGIKEVGWGIDGETARTLLDVGAAFIDVAGAGGTSWSQVEKFRSPDPVRRAAAE 270 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WG PT + R + I SGGL++GVD K++ LGA L G L A+D Sbjct: 271 AFAGWGNPTADCIAEVREAAPDCALIGSGGLQSGVDAAKALALGADLAGFGRGLLGSAVD 330 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S +A+ + + E +MF +G ++ L LIR Sbjct: 331 SVEALDQRLAQVELELRTAMFGIGAGNIEALKSTKRLIR 369 >gi|254166633|ref|ZP_04873487.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|289596403|ref|YP_003483099.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|197624243|gb|EDY36804.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|289534190|gb|ADD08537.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] Length = 337 Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 126/341 (36%), Positives = 200/341 (58%), Gaps = 16/341 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++HI I C D ++ + +++D L H +P++ + V+ SVEFLGKKL++P++ Sbjct: 1 MIENRKLEHIKI-CADKDVNSHHNYWNDVVLKHETIPKVDMENVELSVEFLGKKLNYPII 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG+ K+ + IN NLA AAE+ + MAVGSQR + ++ + + I Sbjct: 60 IDAMTGGH-KVAKLINENLAAAAEELGIGMAVGSQRAAIENTKLEDTYSVVAKYDMPLRI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q +G ++ +A+ ++ A + +H N LQE IQP G+T +L +A L Sbjct: 119 GNLGAPQFALGYGEEEVKKAIEMIDAHAIDIHFNYLQEAIQPEGDTKVGNLRENLAEL-- 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A L+ KE G G+S E +G + D++G GTS++ +E +R E G +F D Sbjct: 177 ARKYKLIAKETGAGISRNAAEFFKNAGFKAIDVSGVSGTSFAAVEYYRGGEE--GKLFWD 234 Query: 241 WGIPTP---LSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 WG+P P LSL ++ P I SGG+RNG+D K+I LGA + G+A LKPAM Sbjct: 235 WGLPAPYCILSLKDLNMP------LIGSGGIRNGLDAAKAIALGADVVGIARILLKPAMK 288 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S + V+ +E + KE +++FL+G + V+EL ++R + Sbjct: 289 SKEDVIKVLERIIKELRIAVFLIGAESVKELKNAKYVVRGE 329 >gi|254167243|ref|ZP_04874095.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|197623506|gb|EDY36069.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] Length = 337 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 126/341 (36%), Positives = 200/341 (58%), Gaps = 16/341 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++HI I C D ++ + +++D L H +P++ + V+ SVEFLGKKL++P++ Sbjct: 1 MIENRKLEHIKI-CADKDVNSHHNYWNDVVLKHETIPKVDMENVELSVEFLGKKLNYPII 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG+ K+ + IN NLA AAE+ + MAVGSQR + ++ + + I Sbjct: 60 IDAMTGGH-KVAKLINENLAAAAEELGIGMAVGSQRAAIENTKLEDTYSVVAKYDIPLRI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q +G ++ +A+ ++ A + +H N LQE IQP G+T +L +A L Sbjct: 119 GNLGAPQFALGYGEEEVKKAIEMIDAHAIDIHFNYLQEAIQPEGDTKVGNLRENLAEL-- 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A L+ KE G G+S E +G + D++G GTS++ +E +R E G +F D Sbjct: 177 ARKYKLIAKETGAGISRNAAEFFKNAGFKAIDVSGVSGTSFAAVEYYRGGEE--GKLFWD 234 Query: 241 WGIPTP---LSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 WG+P P LSL ++ P I SGG+RNG+D K+I LGA + G+A LKPAM Sbjct: 235 WGLPAPYCILSLKDLNMP------LIGSGGIRNGLDAAKAIALGADVVGIARILLKPAMK 288 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S + V+ +E + KE +++FL+G + V+EL ++R + Sbjct: 289 SKEDVIKVLERIIKELRIAVFLIGAESVKELKNAKYVVRGE 329 >gi|88604121|ref|YP_504299.1| isopentenyl pyrophosphate isomerase [Methanospirillum hungatei JF-1] gi|88189583|gb|ABD42580.1| isopentenyl-diphosphate delta-isomerase [Methanospirillum hungatei JF-1] Length = 363 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 134/344 (38%), Positives = 193/344 (56%), Gaps = 31/344 (9%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ I C D I+ FDD L+H ALP+ D + FLG L PL I Sbjct: 7 TSSRKLDHLRI-CLDEHIESGSTGFDDIRLVHEALPDCDMDRLSLETRFLGHNLGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ + + +N L A + + + VGSQR + +F + R+ AP T ++ Sbjct: 66 SAMTGGHPETKD-VNAVLGEIAGEFDLGIGVGSQRAAIENPELADTFSIVREKAPDTFIV 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQL D G++ A +AV ++ AD L +HLN LQE IQP G+ + + + L Sbjct: 125 GNLGIVQLR-DHGIEWAERAVEMIDADALAIHLNFLQEAIQPEGDHDAGGCYAALRELCR 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYF-------DIAGRGGTSWSRIESHR----- 228 + VP+++KE G G+S ++GIR F DI G GG+SW+ IESHR Sbjct: 184 DLKVPVIVKETGSGIS-------YETGIRCFGAGAACVDIGGYGGSSWALIESHRSGSVA 236 Query: 229 ---DLE-SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 DL +G F +WG+PT +SL E R C IASGG+R+G+DI K++++GA L Sbjct: 237 GKEDLHLKGLGERFGEWGLPTVVSLYETTR--CG-GPVIASGGIRSGIDITKALVMGAHL 293 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A P LKPA + D + I ++ +E +SMFL G R+ EL Sbjct: 294 AGMALPLLKPACEGPDVLRETIRTIHQELRISMFLTGKTRISEL 337 >gi|297621342|ref|YP_003709479.1| isopentenyl-diphosphate delta-isomerase [Waddlia chondrophila WSU 86-1044] gi|297376643|gb|ADI38473.1| isopentenyl-diphosphate delta-isomerase [Waddlia chondrophila WSU 86-1044] Length = 355 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 118/329 (35%), Positives = 192/329 (58%), Gaps = 8/329 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK H++ P FF+D +HRA+PE++F E+D S+EFL KK+SFPL I Sbjct: 9 IPSRKQRHLDACMNQPVEGVGSTFFEDVMFVHRAMPELNFSEIDTSIEFLDKKISFPLFI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S MTGG+++ NR LA AA++ + + +GS RV+F+ + F LR+YAP +I+ Sbjct: 69 SCMTGGSDQG-RLANRELAKAAQELNIPIGLGSIRVLFNHPERVDDFLLREYAPDIPIIA 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+ + + + + ++ L D L +HLN QE+ Q G+T F + I Sbjct: 128 NIGGAQI-IELSMHEIREWLNKLEVDALTIHLNCGQELFQNGGDTRFRGIMDAIEKTIDN 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG-IVFQD 240 + +P+++KE G G+S +++ + G Y D+AG GGT+W +E H + D F D Sbjct: 187 LSIPVIVKETGFGISPKEVKKLIAMGTHYVDLAGAGGTNWITVEQHINQTEDFASSAFMD 246 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD--SS 298 WG PT + L+ + Y + ++SGGLR+G+D+ KSI LGA GG+A PF++ ++D Sbjct: 247 WGTPTAILLDTVKKY--RGKILSSGGLRSGMDLAKSIALGAHAGGMALPFIQASIDGGKE 304 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +AVV ++ K +M L G++ +++L Sbjct: 305 EAVVLG-RTIEKVLKSTMLLTGSQTIEDL 332 >gi|308071172|ref|YP_003872777.1| Isopentenyl-diphosphate delta-isomerase [Paenibacillus polymyxa E681] gi|305860451|gb|ADM72239.1| Isopentenyl-diphosphate delta-isomerase [Paenibacillus polymyxa E681] Length = 366 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 127/336 (37%), Positives = 178/336 (52%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RKI+H+ + ++ + + + H ALPE+ FDEV FLG+ + PL Sbjct: 26 TGERKIEHVRLCLQEDVAGKGITSGLERYAFKHCALPELHFDEVRLDTIFLGQAVRTPLF 85 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ + IN LA AE+ A+ VGS R +F +R+ AP ++ Sbjct: 86 ISSMTGGSAET-GAINERLAETAERRGWALGVGSVRAAVEREELASTFAVRRLAPSIPIL 144 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FGV +AV + GAD L LHLN LQEI QP GN +F+ L +I L Sbjct: 145 ANLGAVQLNYGFGVDDCRRAVEIAGADMLVLHLNGLQEIFQPEGNLDFSGLLQRIEELCR 204 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP+ +KEVG G+ +G + D+AG GGTSWS++E R+ + Sbjct: 205 QLSVPVGVKEVGWGIDGETASRLYDAGAAFIDVAGAGGTSWSQVEKFRNPDPVRRAAAEA 264 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG T + R I SGGLR+GVD K++ LGA + G L A+ S Sbjct: 265 FADWGNSTADCIVEVRAVQPHGALIGSGGLRDGVDAAKALALGADMAGFGRSLLGSAVAS 324 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S+A+ A +E + E MF +G ++ L T L Sbjct: 325 SEALEARLEQVELELRTVMFGIGVDGIEGLKDTTRL 360 >gi|16081270|ref|NP_393580.1| isopentenyl pyrophosphate isomerase [Thermoplasma acidophilum DSM 1728] gi|13878556|sp|Q9HLX2|IDI2_THEAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|10639248|emb|CAC11250.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 348 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 129/350 (36%), Positives = 204/350 (58%), Gaps = 29/350 (8%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ + F+DD L+H A PE+++DE+D SV+FLGKKL FP++ Sbjct: 1 MIGKRKEEHIRI-AENEDVSSFHNFWDDISLMHEADPEVNYDEIDTSVDFLGKKLKFPMI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG ++ + INRNLA+AAE+ + M VGS R D + ++ + + + I Sbjct: 60 ISSMTGG-AEIAKNINRNLAVAAERFGIGMGVGSMRAAIVDRSIEDTYSVINESHVPLKI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVH---------VLGADGLFLHLNPLQEIIQPNGNTNFADL 171 +N+GA QL V++ AV ++ AD L +H N LQE++QP G+ N + Sbjct: 119 ANIGAPQL-----VRQDKDAVSNRDIAYIYDLIKADFLAVHFNFLQEMVQPEGDRNSKGV 173 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +I LS + ++ + KE G G S E + +G++ +++G GT+++ +E +R + Sbjct: 174 IDRIKDLSGSFNI--IAKETGSGFSRRTAERLIDAGVKAIEVSGVSGTTFAAVEYYRARK 231 Query: 232 SD------IGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLG 284 + IG F +WGIP+P S+ YC++ A I SGGLRNG+D+ K+I +GA+ G Sbjct: 232 ENNLEKMRIGETFWNWGIPSPASVY----YCSDLAPVIGSGGLRNGLDLAKAIAMGATAG 287 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 G A LK A + ++ IE +++EF V++FL G K V EL +I Sbjct: 288 GFARSLLKDADTDPEMLMKNIELIQREFRVALFLTGNKNVYELKFTKKVI 337 >gi|153006919|ref|YP_001381244.1| isopentenyl pyrophosphate isomerase [Anaeromyxobacter sp. Fw109-5] gi|152030492|gb|ABS28260.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaeromyxobacter sp. Fw109-5] Length = 350 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 135/334 (40%), Positives = 185/334 (55%), Gaps = 11/334 (3%) Query: 2 VNDRKIDHINIVCKD----PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 + +RK H+ + ++ PG D F H ALPE+ V E LGKKL+ Sbjct: 3 IAERKDSHLALCLEEQVELPGGDATG--FGALRFDHDALPEVDLAAVRTETELLGKKLAA 60 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH- 116 P+++ +MTGG + E +NR LA AAE+ VA A+GSQR M D + S+ +R AP Sbjct: 61 PIVVGAMTGGTARAGE-MNRRLARAAERCGVAFALGSQRRMLQDPASRDSYAVRAAAPEL 119 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +L NLGAVQLNY GV + V +GAD HLNPLQE IQP G+T FA L K+A Sbjct: 120 RLLFGNLGAVQLNYGVGVAELRALVRDVGADAFNFHLNPLQEAIQPEGDTRFAALLPKLA 179 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SD 233 + + VP+LLKE+G G+S + + G GGTSW+++ES R + Sbjct: 180 AVIPELGVPVLLKEIGAGISRTTARKIAALPVAGVETGGLGGTSWAKVESLRAADPARKS 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G F WGIPT S+ R + +ASGG+RNG++I K++ LGA LA P LK Sbjct: 240 LGEAFARWGIPTVESIAACRQALPDRVVVASGGIRNGIEIAKALALGADAVALALPLLKA 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A S +A ++ L +E ++MFL G RV EL Sbjct: 300 AEQSWEAAAEELDRLVQELRLAMFLTGCARVSEL 333 >gi|288931869|ref|YP_003435929.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ferroglobus placidus DSM 10642] gi|288894117|gb|ADC65654.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ferroglobus placidus DSM 10642] Length = 354 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/328 (38%), Positives = 203/328 (61%), Gaps = 13/328 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI I C + ++ + F+D LIH+ALPE+ +D++ +EFLGKKL+ P++I+ M Sbjct: 6 RKFEHIRI-CLEENVESSYTGFEDVMLIHKALPEVDYDKISLEIEFLGKKLNAPIIIAGM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + +RIN NLA AAE+ K+ + VGSQR D + + ++ + R+ AP+ +I+N+ Sbjct: 65 TGGHPET-KRINENLAAAAEEFKIGIGVGSQRAGIEDDSLVDTYAIVREKAPNAFVIANI 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL + GV+ A +AV ++ AD L +HLN LQE +QP G+ A+ + + + ++ Sbjct: 124 GISQL-LESGVEYAEKAVEMIDADALAIHLNFLQEAVQPEGDKK-AEGAKEALEEACSLK 181 Query: 184 VPLLLKEVGCGLSSMDIELGLK-SGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQ 239 VP++ KE G G+S ++ L+ +G+ D+ G+GGTSWS +E R D+ ++ + F Sbjct: 182 VPIIAKETGAGISR-EVAFELREAGVSAIDVGGKGGTSWSAVEVFRIKDDVMREVALDFW 240 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT + IA+GG+R+G+D+ K++ LGA G+A PFLKPA S + Sbjct: 241 DWGIPTAFCVAEVHDILPT---IATGGIRSGIDVAKALALGAEAAGIALPFLKPATISEE 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ + +MFL G K V++L Sbjct: 298 EVKRKVKYFVESLKTAMFLTGCKSVKDL 325 >gi|254418893|ref|ZP_05032617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas sp. BAL3] gi|196185070|gb|EDX80046.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas sp. BAL3] Length = 347 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 119/329 (36%), Positives = 186/329 (56%), Gaps = 9/329 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK H+++V G FD +H ALP++ D++D +FLG++L PLLIS+M Sbjct: 12 RKDQHLDVVLSGRGRHARDAGFDAIRFVHEALPDLDHDKIDLGADFLGRRLKAPLLISAM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNL 123 TGG + E +N LA AA+ +A+AVGSQR + + LR AP T +++N+ Sbjct: 72 TGGPARA-EAVNARLAEAAQHLGIALAVGSQRTALEEGASGGLDMGLRHRAPDTPILANI 130 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA QL FG+ +A + + ++GA+ L +HLNPLQE QP G+ ++ + + + L ++ Sbjct: 131 GAAQLTRGFGLDEARRVIEMIGANALIVHLNPLQEACQPEGDRDWWGVGAALEALIRRIE 190 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG-----IVF 238 VP+++KE G GLS + G DIAG GG++W+ IE R +D G F Sbjct: 191 VPVVVKETGAGLSGRTARRLIDMGAAAVDIAGAGGSNWALIEGER--ATDPGDRAHAAAF 248 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+PT ++ R C +A I SGG+R+G+D+ ++I LGA + G A+ L AM S+ Sbjct: 249 GDWGMPTARAIVDVRRACPDAVVIGSGGVRDGLDVARAIRLGADIAGQAAGVLSAAMVST 308 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +AVVA + + ++ F + + L Sbjct: 309 EAVVAHFQLVMRQLRTVCFCTNSANLSAL 337 >gi|325969729|ref|YP_004245921.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta moutnovskia 768-28] gi|323708932|gb|ADY02419.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta moutnovskia 768-28] Length = 358 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 191/334 (57%), Gaps = 12/334 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK DHI I + ++ F++ H IH ALPEI FDEV+ S+ KKLSFP + Sbjct: 1 MIENRKDDHIRI-ASEQNVEEGNNLFNEVHFIHIALPEIDFDEVNTSITIFNKKLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG + E+IN LA AE+ + M VGSQR+ +SF + + AP + Sbjct: 60 IGAMTGG-TETAEKINTTLAKCAEEFNIGMYVGSQRIAIVKPETARSFRIVAENAPTALK 118 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q L+ V QA+ ++ AD + +HLNP QE+ QP G F + K+ Sbjct: 119 IANLGAPQVSRLDEKILVDWVSQAIDMINADAIAIHLNPAQEVFQPEGEPWFRGVIDKLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESHRDLESDI 234 + + PL++KEVG G+ SM++ L S + D+AG GGTS+ RIES R D Sbjct: 179 FIKKIANRPLIVKEVGNGI-SMEVARILASRVNPDAIDVAGIGGTSFIRIESIRAGAIDE 237 Query: 235 GIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 VF WGIPT +++ E+ Y + IASGG+R+G+D K++ +GA+ ++ P L Sbjct: 238 ANVFSGWGIPTAIAICEVRNVY--DGVIIASGGIRSGLDGAKAMAIGANAFSMSRPLLLA 295 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ D I L +EF ++MFL G++ V EL Sbjct: 296 ALKGFDETKKFIGKLLREFKIAMFLTGSRNVNEL 329 >gi|124027424|ref|YP_001012744.1| isopentenyl pyrophosphate isomerase [Hyperthermus butylicus DSM 5456] gi|123978118|gb|ABM80399.1| Isopentenyl-diphosphate delta-isomerase [Hyperthermus butylicus DSM 5456] Length = 383 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/336 (36%), Positives = 191/336 (56%), Gaps = 16/336 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK--FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI I D ++ K + L+HRALPE + +D S+EFLGK+LS PL+++ Sbjct: 6 RKLDHIRITV-DSDVEHPGKITLLEHVELVHRALPETALSSIDTSIEFLGKQLSMPLMVT 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-----RQYAPHT 117 MTGG+ + RIN +A AA + +A+ VGSQR D + +F + R+ Sbjct: 65 GMTGGH-PVAARINCVIARAAARLGIAIGVGSQRAAIEDPSLEYTFRVARDCAREEGGDV 123 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 VL++NLGA QL +GV+ +A+ ++ AD + +H+N QE QP G+ +F + +A Sbjct: 124 VLVANLGAAQLVAGYGVEHVRRAIEMIDADAVAIHVNAAQEAFQPEGDVDFRNAIDLVAE 183 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH----RDLE-- 231 ++ +D P+++KE G GL + + GIR+FD++G GGTSW R+E R L+ Sbjct: 184 VARELDKPVIVKETGHGLGYEVVYVLRGRGIRFFDVSGAGGTSWVRVEYFRARIRGLQGL 243 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ F WGIPT ++ R ++ IASGG+R G+D K+I LGA + GLA P + Sbjct: 244 AEAAKTFSSWGIPTAQAVVETRWAAPDSCIIASGGVRTGLDAAKAIALGADIAGLALPVI 303 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + D V+ +E + EF ++FL G + E Sbjct: 304 RAYTVGDLDGVIGLLERIGMEFKAALFLTGASSLAE 339 >gi|91774306|ref|YP_566998.1| isopentenyl pyrophosphate isomerase [Methanococcoides burtonii DSM 6242] gi|121689010|sp|Q12TH8|IDI2_METBU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91713321|gb|ABE53248.1| Isopentenyl-diphosphate delta-isomerase [Methanococcoides burtonii DSM 6242] Length = 362 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 132/335 (39%), Positives = 195/335 (58%), Gaps = 14/335 (4%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RKI+H+ + K P RN FDD LIH+ALP+I DE+D S +FLGK L P LI+S Sbjct: 6 RKIEHLELCAKRPVESRNVTSGFDDVMLIHKALPQIHMDEIDLSTDFLGKSLKAPFLIAS 65 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ +N LA AAE+ V + VGSQR D SF + R AP+ + N Sbjct: 66 ITGGHPDTTP-VNAALAEAAEELGVGIGVGSQRAAIEDPEQESSFSVVRDKAPNAFVYGN 124 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA Q+ ++G++ + V +L AD L +HLN LQE IQP G+ + + I + S + Sbjct: 125 VGAAQIK-EYGIEAIEKLVDMLDADALAVHLNFLQEAIQPEGDRDATGVLEMIKEVCS-L 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------DIGI 236 +VP++ KE G G+S D L ++G+ D+ G GGTSWS +E +R +S D+G Sbjct: 183 NVPIIAKETGAGISKEDAALLKEAGVSAIDVGGVGGTSWSGVEVYRAHDSGDAISEDLGN 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 ++ D+GIPT S+ R + +A+GG+R G+DI KS+ LGA A PF+ PA+ Sbjct: 243 LYWDFGIPTVSSVLECRSF---VPVVATGGVRTGLDIAKSLSLGAYAASAALPFVGPALI 299 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 +D VV+++ + E V+MFL G + EL ++ Sbjct: 300 GADEVVSSLSKMLNELRVAMFLCGCGNINELRTSS 334 >gi|307595534|ref|YP_003901851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta distributa DSM 14429] gi|307550735|gb|ADN50800.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta distributa DSM 14429] Length = 358 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 186/333 (55%), Gaps = 10/333 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK DHI I ++ F++ LIH ALPEI D+VD S+ K+LSFP + Sbjct: 1 MIESRKDDHIRIASGQ-NVEEGNNLFNEVQLIHMALPEIDLDDVDTSITIFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I +MTGG + E+IN LA AE+ + M VGSQRV +SF + + AP + Sbjct: 60 IGAMTGG-TETAEKINTILAKCAEEYGIGMYVGSQRVAIVKPETARSFRVVAENAPTALK 118 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q L+ QA+ ++ AD + +HLNP QE+ QP G F + K+ Sbjct: 119 IANLGAPQVSRLDEKVLSDWVSQAIDMINADAIAIHLNPAQEVFQPEGEPWFRGVIDKLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGL--KSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + + PL++KEVG G+ SM++ L K G D+AG GGTS+ RIES R +D Sbjct: 179 FIKRVANRPLIVKEVGNGI-SMEVAKALVSKVGPDAIDVAGTGGTSFIRIESIRAGTTDE 237 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 VF WGIPT +S+ R N IASGG+R+G+D K+I +GA+ ++ P L A Sbjct: 238 ADVFSGWGIPTAISICEVRSVYN-GVIIASGGIRSGLDGAKAIAIGANAFSMSRPLLLAA 296 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + D I L +EF ++MFL G++ V EL Sbjct: 297 LKGYDEAKRFIGKLLREFKIAMFLTGSRSVDEL 329 >gi|159041710|ref|YP_001540962.1| isopentenyl pyrophosphate isomerase [Caldivirga maquilingensis IC-167] gi|157920545|gb|ABW01972.1| isopentenyl-diphosphate delta-isomerase, type 2 [Caldivirga maquilingensis IC-167] Length = 374 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 134/334 (40%), Positives = 198/334 (59%), Gaps = 13/334 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ FD LIH ALPE+ F++VD ++E K+LSFP + Sbjct: 1 MIGGRKDEHIRIASSS-DVEVGDSLFDGVQLIHNALPEMDFNDVDSTIELFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I ++TGG + R+N LA AAE+ + M VGSQR+ SF + + AP + Sbjct: 60 IGALTGGT-ETAGRVNAVLAKAAEEFGIGMYVGSQRIALMKPETAWSFRVVKDNAPSALK 118 Query: 120 ISNLGAVQL----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 I+NLGA Q+ + D V ++AV ++ AD + +HLNP QE+ QP G F+ + SK+ Sbjct: 119 IANLGAPQVSRLSDRDL-VDWVNEAVDMINADAVAIHLNPAQELFQPEGEPWFSGVLSKL 177 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDI 234 L+ ++ PL++KEVG G+ SM++ L S D+AG GGTS+ RIE+ R + + Sbjct: 178 KLIRRVVNRPLIIKEVGNGV-SMEVARMLNSIPPDAIDVAGHGGTSFIRIEAIRGGDVNE 236 Query: 235 GIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 VF+DWGIPT LS+ E++ Y + IASGG+RNG+D K+I LGA ++ P L Sbjct: 237 ADVFRDWGIPTVLSICEVSSVY--DGVIIASGGVRNGLDGAKAIALGADAFTMSRPMLVS 294 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ +AV I L EF +MFL G++RV++L Sbjct: 295 ALKGYEAVRELINKLMWEFKATMFLTGSRRVEDL 328 >gi|288560179|ref|YP_003423665.1| isopentenyl diphosphate delta-isomerase Fni [Methanobrevibacter ruminantium M1] gi|288542889|gb|ADC46773.1| isopentenyl diphosphate delta-isomerase Fni [Methanobrevibacter ruminantium M1] Length = 350 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 127/343 (37%), Positives = 204/343 (59%), Gaps = 17/343 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M++DRK++H+ ++CK+ + N K F+D LIHRALPEI+ D++D S E GKKL P Sbjct: 1 MISDRKLEHL-LICKNYDVSYNDKTTGFEDIELIHRALPEINNDDIDLSTEVFGKKLDSP 59 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 L I+++TGG+ K + IN+ LAI AE + + +GSQR + ++++ R+ AP Sbjct: 60 LFITAITGGH-KAAKDINKELAIIAESRNIGLGLGSQRAAIVNPELRDTYDVVRENAPDA 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +++ N+GA Q + A AV +L +D L +HLNPLQE IQP G+ + I Sbjct: 119 LILGNIGAPQSDL------AIDAVEILDSDILAIHLNPLQESIQPEGDVDARGYVDSIKE 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + +DVP++ KE G G+ + D IEL K+G+ + D+ G GGTSW+ +E++R + +G Sbjct: 173 ICKTVDVPVMAKETGTGIRAEDAIELE-KAGVSFIDVEGAGGTSWAAVETYRAEDRYLGE 231 Query: 237 VFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDI-LKSIILGASLGGLASPFLKPA 294 +F DWGIPT +S +E+ E ++SGG+ L++I LGA G+A P LK A Sbjct: 232 LFWDWGIPTAVSTVEVVNSV--EIPVVSSGGISFRTRCKLRAIALGADAVGMALPALKGA 289 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +A+ + + ++MFLLG ++EL + +I+ + Sbjct: 290 YEGQEALNQMVNRFNESLRIAMFLLGASNLEELKRSDLIIKGE 332 >gi|15897029|ref|NP_341634.1| isopentenyl pyrophosphate isomerase [Sulfolobus solfataricus P2] gi|284173373|ref|ZP_06387342.1| isopentenyl pyrophosphate isomerase [Sulfolobus solfataricus 98/2] gi|2829821|sp|P95997|IDI2_SULSO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1707831|emb|CAA69539.1| orf c05008 [Sulfolobus solfataricus P2] gi|13813194|gb|AAK40424.1| FMN-dependent dehydrogenase, conserved hypothetical [Sulfolobus solfataricus P2] gi|261601683|gb|ACX91286.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus solfataricus 98/2] Length = 368 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 119/340 (35%), Positives = 198/340 (58%), Gaps = 11/340 (3%) Query: 4 DRKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK++H+ I + +D + F +D L+H+ P ISF E++ +F K++S P+++ Sbjct: 6 NRKVEHVEIAAFE-NVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISAPIMV 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG N++ RINR +A AEK + M VGSQRV A +SF + R+ AP +I Sbjct: 65 TGMTGGRNEL-GRINRIIAEVAEKFGIPMGVGSQRVAIEKAEARESFTIVRKVAPTIPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLS 179 +NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + + ++ +S Sbjct: 124 ANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALERLRDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDI 234 + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ +++ Sbjct: 184 KELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F DWG+PT S+ R +A + SGG+R+G+D K+I LGA + G+A P LK A Sbjct: 244 AKNFLDWGVPTAASIIEVRYSIPDAFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ +++ + E +M L G+K V+ L ++ +I Sbjct: 304 IEGKESLEQFFRKIIFELKATMMLTGSKNVEALKRSSIVI 343 >gi|294085699|ref|YP_003552459.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665274|gb|ADE40375.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Puniceispirillum marinum IMCC1322] Length = 354 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 129/343 (37%), Positives = 191/343 (55%), Gaps = 24/343 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +DRK H+++ D L H A+PE D +D S +FLG LS PL I Sbjct: 11 TSDRKDTHLDLAMSPRAQAGVSNSMDRLRLTHCAMPECDLDAIDISTQFLGYDLSAPLFI 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG K +RIN LA A+ VA+AVGSQR + ++++ LR AP +I Sbjct: 71 GAMTGGT-KRADRINAALAETAQSCSVALAVGSQRAGLENGSSLR--HLRTLAPDIPIIG 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQL G+ A A+ L AD + +HLNPLQE +QP G+ ++ +++ I + Sbjct: 128 NLGAVQLAGKGGLDLAKAAIDDLQADAIAIHLNPLQEAVQPEGDRDWCGVAAAIEQAVTD 187 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV--FQ 239 + VP+++KEVG G+ + + G+ D+AG GGT+W+RIE+ R + D + F Sbjct: 188 LTVPVIVKEVGAGIGASLAHRLFEMGVMAVDVAGLGGTNWTRIEAARITDDDAALFAPFL 247 Query: 240 DWGIPTPLSLEMARPYCNEA---QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWG+PT LE CN Q IASGG+R+G+D+ K++ +GAS+ +A P LK +D Sbjct: 248 DWGLPT---LECLIDVCNRCPHHQIIASGGIRHGLDVAKALWVGASMVSMAGPMLKMLID 304 Query: 297 SSDAVVAAIESL------------RKEFIVSMFLLGTKRVQEL 327 SD V AIE+L +K+ +++FL G+ + L Sbjct: 305 MSDDEV-AIETLSPDTLSQALMDWQKQLALALFLTGSADIASL 346 >gi|159040817|ref|YP_001540069.1| isopentenyl pyrophosphate isomerase [Caldivirga maquilingensis IC-167] gi|157919652|gb|ABW01079.1| isopentenyl-diphosphate delta-isomerase, type 2 [Caldivirga maquilingensis IC-167] Length = 377 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 134/334 (40%), Positives = 196/334 (58%), Gaps = 13/334 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ FD LIH ALPE+ F++VD ++E K+LSFP + Sbjct: 1 MIGGRKDEHIRIASSS-DVEVGDSLFDGVQLIHNALPEMDFNDVDSTIELFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I ++TGG + R+N LA AAE+ + M VGSQR+ SF + + AP + Sbjct: 60 IGALTGGT-ETAGRVNAVLAKAAEEFGIGMYVGSQRIALMKPETAWSFRVVKDNAPSALK 118 Query: 120 ISNLGAVQL----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 I+NLGA Q+ + D V ++AV ++ AD + +HLNP QE+ QP G F+ + K+ Sbjct: 119 IANLGAPQVSRLSDRDL-VDWVNEAVDMINADAVAIHLNPAQELFQPEGEPWFSGVLGKL 177 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDI 234 L+ ++ PL++KEVG G+S M++ L S D+AG GGTS+ RIE+ R E Sbjct: 178 KLIRRVVNRPLIIKEVGNGVS-MEVARMLNSIPPDAIDVAGHGGTSFIRIEAIRGGELSK 236 Query: 235 GIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 VF+DWGIPT LS+ E++ Y + IASGG+RNG+D K+I LGA ++ P L Sbjct: 237 ADVFRDWGIPTVLSICEVSSVY--DGVIIASGGVRNGLDGAKAIALGADAFTMSRPMLVS 294 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ +AV I L EF +MFL G++RV++L Sbjct: 295 ALKGYEAVRELINKLMWEFKATMFLTGSRRVEDL 328 >gi|254262248|emb|CAZ90575.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter helveticus] Length = 346 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 128/323 (39%), Positives = 182/323 (56%), Gaps = 8/323 (2%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV DP NK F+ W H ALPE+ D ++ GKKL P+LIS Sbjct: 8 RKNDHLDIVL-DPARATNKVTTGFERWRFEHCALPELDLDSINLETLLFGKKLKAPVLIS 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLIS 121 SMTGG + + IN++LA AA+ +AM VGSQRV N + ELR+ AP L++ Sbjct: 67 SMTGGAQRA-QHINQHLAQAAQTLGLAMGVGSQRVALEAENDFGLTGELRRIAPDIPLLA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I A Sbjct: 126 NLGAAQIAGPGGADYARRAVEMIQADALIIHLNPLQEALQNRGDRDWRGVLAAIRRTVEA 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIVF 238 + VP+++KEVG GLS + +++G+ D+AG GGTSW+ +E R S + + F Sbjct: 186 LSVPVVVKEVGAGLSLPVAKQLVEAGVAMLDVAGAGGTSWAAVEGERAATSRQRAVAMAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L IASGG+ NG+D K++ LGA L G A+ L A S Sbjct: 246 ADWGIPTARALRDLHDGLPGTPLIASGGINNGIDAAKALRLGAHLVGQAAAVLGSANTSQ 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGT 321 +AV+ L ++ V+ F G+ Sbjct: 306 EAVIDHFAVLIEQLRVACFCTGS 328 >gi|146304883|ref|YP_001192199.1| isopentenyl pyrophosphate isomerase [Metallosphaera sedula DSM 5348] gi|172046960|sp|A4YIM3|IDI2_METS5 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145703133|gb|ABP96275.1| isopentenyl-diphosphate delta-isomerase, type 2 [Metallosphaera sedula DSM 5348] Length = 366 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 195/332 (58%), Gaps = 10/332 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK++H+ I + +D LIH+A+P ++F +VD EFLGK LS PL+++ Sbjct: 5 NRKLEHVEICLYEDVQGIVSTLLEDVTLIHQAMPRMNFRDVDTRAEFLGKTLSLPLMVTG 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ ++ ++N +A E+ +AM VGSQRV +SF++ R+ AP L++N Sbjct: 65 MTGGHEEL-GKVNAVIAEVVEELGLAMGVGSQRVAVERPETAESFKVTRRMAPTAPLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL--LSS 180 LG Q+ +GV++ A+ ++ A+ + +HLNP QE+ QP G + LS+ AL +S Sbjct: 124 LGLPQVTRGYGVKQFMDAIQMIEANAIAVHLNPAQELFQPEGEPEYP-LSALEALRDISK 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD-----LESDIG 235 ++VP+++KE G G+S +L G + D++G+GGTSW +E R+ + + Sbjct: 183 ELNVPVIVKESGTGMSMETAKLLADHGFKILDVSGQGGTSWIAVEMVRNRRKGNWKYESS 242 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 +F WGIPT S+ R ++ IASGG+RNG+D+ KSI LGA++ G+A+P L A+ Sbjct: 243 QLFSGWGIPTAASIVETRYSVPDSYIIASGGIRNGLDVAKSISLGANIAGMANPVLHHAV 302 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + E + + +MFL G++ V+ L Sbjct: 303 RGKEQLKKFFEEVAFQLRAAMFLTGSRDVKTL 334 >gi|67003502|dbj|BAD99413.1| IPP isomerase [Brevundimonas sp. SD212] Length = 350 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 119/324 (36%), Positives = 183/324 (56%), Gaps = 8/324 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI+ V G+ + +H ALP+++ D++D S FLG++L+ P LISSM Sbjct: 11 RKDEHIDHVRAGRGLSGASSGLEAVRFVHDALPDLALDQIDLSARFLGRRLNLPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF----ELRQYAPHTVLI 120 TGG ++ E IN LA AA+ VA+AVGSQRV +LR+ AP +++ Sbjct: 71 TGGPSRA-EAINARLAEAAQALGVALAVGSQRVALETAGGSGGSGLGPDLRRRAPDALIL 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQ +GV +A +A+ ++GAD L LHLNPLQE +QP G+ ++ ++ I +++ Sbjct: 130 ANLGAVQFALGYGVDEARRAMEMIGADALILHLNPLQEGVQPEGDRDWRGVAQGIERIAA 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIV 237 A +++KE G GLS+ G+ D+AG GGT+W IE R + Sbjct: 190 AFPGQVVVKETGAGLSAAVARRLADMGVAALDVAGAGGTNWGLIEGARATGGRAEALAAP 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT SL + I SGG+++G+D +++ LGA L G A+ L+ A+ S Sbjct: 250 FADWGVPTARSLRDCAQAAPDLGLIGSGGIKDGLDAARAVRLGADLVGQAAGVLEAALTS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGT 321 + AVV E + + ++ F G+ Sbjct: 310 TQAVVDHFELMAAQLRLACFCTGS 333 >gi|13541010|ref|NP_110698.1| isopentenyl pyrophosphate isomerase [Thermoplasma volcanium GSS1] gi|20978497|sp|Q97CC2|IDI2_THEVO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14324394|dbj|BAB59322.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 347 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 126/343 (36%), Positives = 197/343 (57%), Gaps = 29/343 (8%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ + ++DD +L+H A PE+++D++D V+FLGK L FP++ Sbjct: 1 MIEKRKEEHIRI-AENENVSAFHNYWDDVYLMHEADPEVNYDDIDTGVDFLGKHLGFPMV 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG ++ ++IN NLA AEK ++AM VGS R + + ++ + + I Sbjct: 60 ISSMTGGA-EIAKKINYNLATVAEKYQLAMGVGSMRAAIVNRSLSDTYSVINERNVPIKI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVH---------VLGADGLFLHLNPLQEIIQPNGNTNFADL 171 +N+GA QL V + +A+ ++ AD L +H N LQE++QP G+ N + Sbjct: 119 ANIGAPQL-----VPQGKEAIDEKDIAYIYDLIKADFLAVHFNFLQEMVQPEGDRNAEGV 173 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +I LS + ++ + KE G G S + +G++ +++G GT+++ +E +R Sbjct: 174 IKRIKELSGSFNI--IAKETGSGFSKATAQRLADAGVKAIEVSGLSGTTFAAVEYYRAKN 231 Query: 232 SD------IGIVFQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLG 284 IG F +WGIP+P S+ YC++ I SGGLRNG+D+ K+I LGASLG Sbjct: 232 EGNAEKMRIGETFWNWGIPSPASVY----YCSDVLPVIGSGGLRNGLDLAKAISLGASLG 287 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G A LK A S +AV +E + +EF V+MFL G K V EL Sbjct: 288 GFARTLLKDADQSVEAVSRNVEMIEREFKVAMFLTGNKNVYEL 330 >gi|47605803|sp|P61615|IDI2_SULSH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|221046552|pdb|2ZRU|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046553|pdb|2ZRU|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046554|pdb|2ZRU|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046555|pdb|2ZRU|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046556|pdb|2ZRV|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046557|pdb|2ZRV|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046558|pdb|2ZRV|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046559|pdb|2ZRV|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046560|pdb|2ZRW|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046561|pdb|2ZRW|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046562|pdb|2ZRW|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046563|pdb|2ZRW|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046564|pdb|2ZRX|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046565|pdb|2ZRX|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046566|pdb|2ZRX|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046567|pdb|2ZRX|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046568|pdb|2ZRY|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046569|pdb|2ZRY|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046570|pdb|2ZRY|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046571|pdb|2ZRY|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046572|pdb|2ZRZ|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046573|pdb|2ZRZ|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046574|pdb|2ZRZ|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046575|pdb|2ZRZ|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|34327946|dbj|BAC82424.1| isopentenyl diphosphate isomerase [Sulfolobus shibatae] Length = 368 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 118/340 (34%), Positives = 196/340 (57%), Gaps = 11/340 (3%) Query: 4 DRKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK++H+ I + +D + F +D L+H+ P ISF E++ +F K++S P+++ Sbjct: 6 NRKVEHVEIAAFE-NVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMV 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG N++ RIN+ +A AEK + M VGSQRV A +SF + R+ AP +I Sbjct: 65 TGMTGGRNEL-GRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLS 179 +NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + + K+ +S Sbjct: 124 ANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDI 234 + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ +++ Sbjct: 184 KELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F DWG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK A Sbjct: 244 AKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ +++ + E +M L G+K V L + +I Sbjct: 304 IEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVI 343 >gi|254262302|emb|CAZ90626.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter pulveris] Length = 346 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 128/323 (39%), Positives = 182/323 (56%), Gaps = 8/323 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV DP NK + W H ALPE+ D V+ GK L P+LIS Sbjct: 8 RKNDHLDIVL-DPLRATNKATTGLERWRFEHCALPELDLDSVNLETMLFGKTLKAPVLIS 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLIS 121 SMTGG + + IN++LA AA+ +AM VGSQRV N + ELR+ AP L++ Sbjct: 67 SMTGGAQRA-QHINQHLAQAAQTLGLAMGVGSQRVALEAQNDFGLTGELRRVAPDIPLLA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ GV A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I A Sbjct: 126 NLGAAQIAGPGGVAYARRAVEMIEADALIIHLNPLQEALQNGGDRDWRGVLAAIRQTVDA 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG GLS + + +G+ D+AG GGTSW+ +E R + I + F Sbjct: 186 LGVPVVVKEVGAGLSLPVAKQLIDAGVAMLDVAGAGGTSWAAVEGERAATPRQRAIAMAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG+ NG++ K++ LGA L G A+ L A S+ Sbjct: 246 ADWGIPTAQALRDLHDALPDTPLIASGGITNGIEAAKALRLGAHLVGQAAAVLGSANTSA 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGT 321 AV+ E L ++ V+ F G+ Sbjct: 306 QAVIDHFEVLIEQLRVTCFCTGS 328 >gi|329889443|ref|ZP_08267786.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas diminuta ATCC 11568] gi|328844744|gb|EGF94308.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas diminuta ATCC 11568] Length = 328 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 112/281 (39%), Positives = 167/281 (59%), Gaps = 5/281 (1%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FDDW +H ALP++ +D V+FLG++L P LIS+MTGG + E IN LA AA+ Sbjct: 15 FDDWRFVHEALPDLDHARIDLGVDFLGRRLKAPFLISAMTGGPARA-EAINARLAEAAQH 73 Query: 86 TKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +A+AVGSQR A F +R AP T +++N+GA QL FG +A +A+ ++ Sbjct: 74 LGIALAVGSQRAALEGGAAGGLDFSMRLKAPDTPILANIGAAQLTRGFGRDEARRALDMI 133 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 GAD L +HLNPLQE QP G+ ++ + + + L +D P+++KE G G+S++ + + Sbjct: 134 GADALVVHLNPLQEACQPEGDRDWWGVGAALQALIRDLDAPVIVKETGAGISAVTAQRLI 193 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G D+AG GG +W IE R + + F DWG+PT +L R +A Sbjct: 194 AMGAAGVDVAGAGGANWGLIEGERATDPADKAHALAFADWGVPTARALAETRNAVPDALL 253 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 I SGG+R+GVD K+I LGA + G+AS ++ A S++AV+ Sbjct: 254 IGSGGVRDGVDAAKAIRLGADIVGMASGVIQAATVSTEAVI 294 >gi|320333534|ref|YP_004170245.1| Isopentenyl-diphosphate delta-isomerase [Deinococcus maricopensis DSM 21211] gi|319754823|gb|ADV66580.1| Isopentenyl-diphosphate delta-isomerase [Deinococcus maricopensis DSM 21211] Length = 345 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 125/329 (37%), Positives = 191/329 (58%), Gaps = 6/329 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++DRK+ HI + D F+ +RALP+++ D+VD FLG+ L P+L Sbjct: 10 LSDRKLRHIEACLRADSQYAHVTTGFERLRWPYRALPDLNVDDVDLRTTFLGRALRAPVL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG + INRNLA AA++ V + +GSQRVM + SF++R AP +LI Sbjct: 70 IGAMTGGAQRAAH-INRNLATAAQRLGVGLMLGSQRVMLERPDTAASFQVRAVAPDVLLI 128 Query: 121 SNLGAVQLNYDFGVQKAH--QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 NLGA Q + G +AH +AV +GAD L +H+NPLQE +Q G+ +A +++++A + Sbjct: 129 GNLGAAQ--FLRGYDEAHVVRAVEGVGADALAIHVNPLQEALQAGGDRAWAGVAARLAEV 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + PLLLKEVG GL + ++G D+AG GGTSW+R+E + Sbjct: 187 VPRVPYPLLLKEVGHGLDGAAVRAAARAGFAALDVAGAGGTSWARVEQLVRFGAVRTPDL 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + G+PT +L AR IASGG+R+G+D K++ LGA+ +A P L PA+DS+ Sbjct: 247 CEVGVPTAQALLGARAAAPGVPLIASGGIRSGLDAAKALALGATAVAVARPLLAPALDSA 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +AV A + + +E V++F+ G V+ + Sbjct: 307 EAVEAWLATFLEELRVALFVGGFGSVRAV 335 >gi|153831546|ref|ZP_01984213.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio harveyi HY01] gi|148872056|gb|EDL70873.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio harveyi HY01] Length = 339 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 187/331 (56%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ VD S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAVDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVL 119 SSMTGG K E IN LA AA + +AM VGSQRV D H+ + +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGK-TIRDLAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 123 YSNLGAAQLRDKQRFDNAQRAVDFIQADALFVHLNPMQEAFQQNGDHDWIGVLKSIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 +DVP+++KEVG G+S + + +++G+ D+AG GGTSWS +E + ++ + Sbjct: 183 QRVDVPMIIKEVGFGISGVVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT LE R + IASGG+ NG+++ K++ LGA+L G A LK A Sbjct: 243 LFRDWGIPTAKCLEQIRGQYPDLPLIASGGVYNGLEVAKAVHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++++V E + E ++ F G+ +Q L Sbjct: 303 STESIVEHFEQMALELRLACFGTGSANLQAL 333 >gi|227828316|ref|YP_002830096.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.14.25] gi|227831074|ref|YP_002832854.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus L.S.2.15] gi|229579955|ref|YP_002838354.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus Y.G.57.14] gi|229581384|ref|YP_002839783.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus Y.N.15.51] gi|238620508|ref|YP_002915334.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.16.4] gi|284998570|ref|YP_003420338.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.D.8.5] gi|259491449|sp|C4KJA2|IDI2_SULIK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491450|sp|C3MJQ6|IDI2_SULIL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491451|sp|C3MZ14|IDI2_SULIM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491452|sp|C3NMP1|IDI2_SULIN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491453|sp|C3N8S7|IDI2_SULIY RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|227457522|gb|ACP36209.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.S.2.15] gi|227460112|gb|ACP38798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.14.25] gi|228010670|gb|ACP46432.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus Y.G.57.14] gi|228012100|gb|ACP47861.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus Y.N.15.51] gi|238381578|gb|ACR42666.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.16.4] gi|284446466|gb|ADB87968.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.D.8.5] gi|323475386|gb|ADX85992.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus REY15A] gi|323478111|gb|ADX83349.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus HVE10/4] Length = 368 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/340 (34%), Positives = 195/340 (57%), Gaps = 11/340 (3%) Query: 4 DRKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK++H+ I + +D + F +D L+H+ P ISF E++ +F K++S P+++ Sbjct: 6 NRKVEHVEIAAFE-NVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIMV 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG N++ RIN+ +A EK + M VGSQRV A +SF + R+ AP +I Sbjct: 65 TGMTGGRNEL-GRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLS 179 +NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + + K+ +S Sbjct: 124 ANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDI 234 + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ +++ Sbjct: 184 KELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F DWG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK A Sbjct: 244 AKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ +++ + E +M L G+K V L + +I Sbjct: 304 IEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVI 343 >gi|72536067|gb|AAZ73134.1| isopentenyl pyrophosphate isomerase [Enterobacteriaceae bacterium DC404] Length = 349 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 189/336 (56%), Gaps = 10/336 (2%) Query: 5 RKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH++IV D + + FD W H ALPE+ D +D S + L P+LISS Sbjct: 9 RKNDHLDIVLHPDRAMSTIRTGFDAWRFEHCALPELDLDGIDLSTTLFSRPLKAPVLISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVLIS 121 MTGG + + INR+LA AA+ +AM VGSQRV D + + + +LR AP L++ Sbjct: 69 MTGGAARARD-INRHLAQAAQTLGLAMGVGSQRVALEDGAQHGLDA-QLRHIAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + IA L Sbjct: 127 NLGAAQIRGAQGLDYARRAVDMIDADALIVHLNPLQEALQGGGDRDWRGILNAIAQLVRD 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESD---IGIV 237 + VP+++KEVG G+S D+ L G+ DIAG GGTSW+ +E+ R + + + Sbjct: 187 LPVPVVVKEVGAGISP-DVACRLADVGVAMIDIAGAGGTSWAAVEAERAPTPEARNVAMA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT +L + IASGG+ NG+D K+I LGA L G A+ L A S Sbjct: 246 FADWGIPTADALRRVHLALPDIPLIASGGIANGIDAAKAIALGADLVGQAAAVLAHANAS 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DA +A +L + ++ F G+ +Q L T L Sbjct: 306 GDAAIAHFRTLITQLRIACFCTGSANLQALRHATLL 341 >gi|156937597|ref|YP_001435393.1| isopentenyl pyrophosphate isomerase [Ignicoccus hospitalis KIN4/I] gi|166226198|sp|A8AAN4|IDI2_IGNH4 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156566581|gb|ABU81986.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignicoccus hospitalis KIN4/I] Length = 360 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 190/327 (58%), Gaps = 9/327 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK+DH+ I + ++ + D + HRA+PE++ +EV +E GKKLS PL++ Sbjct: 3 TSNRKLDHLRITLLED-VEAGDTWLDFVKVPHRAVPELNLEEVVTEIEVFGKKLSAPLIV 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGGN +IN +A E+ + M VGSQR +F + R+ AP+ +LI Sbjct: 62 TGMTGGNEHAA-KINAVIAEVVEELGLGMGVGSQRAAVERPELEWTFRIARERAPNALLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QL +G+++ +A+ ++ AD + +HLN QE QP G+ ++ L +K++ L Sbjct: 121 ANLGAPQLLKGYGLEEIKKAIDMIDADAIAIHLNAAQESFQPEGDVDYKGLLNKLSELVD 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------SDI 234 ++ P+++KE G GL ++ + GI+ FD++G GGTSW R+E +R E + + Sbjct: 181 KVEKPIIIKETGAGLDYESVKALRELGIKAFDVSGSGGTSWVRVEMYRAREKGDEVLATV 240 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 WGIPT S+ AR +A IASGG+R+G+ +KS+ LGA L G+A P LK A Sbjct: 241 ADWMSSWGIPTAASIMEARAAAPDALVIASGGIRDGLHAVKSLALGADLVGVALPALKAA 300 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGT 321 + + + ++S+ + +FL G+ Sbjct: 301 YEGKEELKKFLKSMMLSIKIGLFLTGS 327 >gi|15669053|ref|NP_247857.1| isopentenyl pyrophosphate isomerase [Methanocaldococcus jannaschii DSM 2661] gi|2842579|sp|Q58272|IDI2_METJA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1591547|gb|AAB98867.1| carotenoid biosynthetic gene ERWCRTS isolog [Methanocaldococcus jannaschii DSM 2661] Length = 359 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 120/341 (35%), Positives = 196/341 (57%), Gaps = 14/341 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI +C ++ K +D LIH+ I+F++++ +E GKKLS P+++S Sbjct: 11 RKLEHI-FLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIVSG 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG++K E IN+N+A A E+ + M VGSQR + I ++ + + + ++I NL Sbjct: 70 MTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNLVIGNL 128 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS--- 179 GAV D + + +A+ ++ AD + +H NPLQEIIQP G+ NF +L ++S Sbjct: 129 GAVNFIVDDWDEEIIDKAIEMIDADAIAIHFNPLQEIIQPEGDLNFKNLYKLKEIISNYK 188 Query: 180 -SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV- 237 S ++P + K+VG G S D + G D+ G GGTSW+++E +R E +I + Sbjct: 189 KSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVKEEEIKRLA 248 Query: 238 --FQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F +WGIPT S+ E+ Y + I SGG+R G+DI K I +G +A P LK + Sbjct: 249 EKFANWGIPTAASIFEVKSVY--DGIVIGSGGIRGGLDIAKCIAIGCDCCSVALPILKAS 306 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + VV +ES KE ++MFL+G + ++EL + +++ Sbjct: 307 LKGWEEVVKVLESYIKELKIAMFLVGAENIEELKKTSYIVK 347 >gi|21227866|ref|NP_633788.1| isopentenyl pyrophosphate isomerase [Methanosarcina mazei Go1] gi|24211805|sp|Q8PW37|IDI2_METMA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|20906280|gb|AAM31460.1| Isopentenyl-diphosphate delta-isomerase [Methanosarcina mazei Go1] Length = 365 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 131/332 (39%), Positives = 196/332 (59%), Gaps = 13/332 (3%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RKI+H+ + + P R F+D LIHRALPE++ DE+D SV+FLGK++ P LI+S Sbjct: 8 RKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIKAPFLIAS 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ I +N LA AAE+ V + VGSQR D + SF + R AP + N Sbjct: 68 ITGGHPDTIP-VNAALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPDAFVYGN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA Q+ +GV+ + + ++ AD L +HLN LQE +QP G+ + I + S + Sbjct: 127 VGAAQIR-QYGVEGVEKLIEMIDADALAIHLNFLQEAVQPEGDRDATGCLDMITEICSQI 185 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------DIGI 236 P+++KE G G+S D L K+G+ D+ G GGTSW+ +E +R ES +G Sbjct: 186 KTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVSERLGE 245 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F D+GIPT SL +R IA+GG+RNG+DI KSI LGAS A PF+ P+++ Sbjct: 246 LFWDFGIPTVASLIESR---VSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPSLE 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 ++VV + + +EF +MFL G +++L+ Sbjct: 303 GKESVVRVLSCMLEEFKAAMFLCGCGNIKDLH 334 >gi|163800106|ref|ZP_02194007.1| isopentenyl pyrophosphate isomerase [Vibrio sp. AND4] gi|159175549|gb|EDP60343.1| isopentenyl pyrophosphate isomerase [Vibrio sp. AND4] Length = 339 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 130/330 (39%), Positives = 183/330 (55%), Gaps = 8/330 (2%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H++ V D + F+ H ALPE F +D S FLG +L+ P LIS Sbjct: 6 NRKDLHLDAVLHHDMSMKSKTAGFESVEFEHCALPECDFSAIDLSRTFLGHQLALPFLIS 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVLI 120 SMTGG K E IN LA AA + +AM VGSQRV D H+ + +R A L Sbjct: 66 SMTGGA-KEAETINCRLAEAASEMGIAMGVGSQRVSLEDRLHSGLGK-TIRDLAKGIPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL G AH+AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 124 SNLGAAQLRDRQGFDNAHRAVDFIQADALFVHLNPMQEAFQKNGDHDWIGVLKSIEQLKL 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 +D+P+++KEVG G+S + ++ G+ D+AG GGTSWS +E + +S + + Sbjct: 184 RLDMPMIIKEVGFGISCVVARQLVEVGVDAIDVAGAGGTSWSAVEGYCQTDSKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT LE R + +ASGG+ NG++ K+I LGA L G A LK A S Sbjct: 244 FRDWGIPTATCLEQIRSQYPDLPLLASGGVYNGLEAAKAIHLGAHLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +++V+ E + E ++ F G+ +Q L Sbjct: 304 TESVIEHFEQMALELRLACFGTGSVNLQML 333 >gi|42523129|ref|NP_968509.1| isopentenyl pyrophosphate isomerase [Bdellovibrio bacteriovorus HD100] gi|81617563|sp|Q6MMK2|IDI2_BDEBA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|39575334|emb|CAE79502.1| Isopentenyl-diphosphate delta-isomerase [Bdellovibrio bacteriovorus HD100] Length = 347 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/332 (38%), Positives = 184/332 (55%), Gaps = 11/332 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL--GKK--LSFPLL 60 RK DHI I + D LIH ALP+++F EVD S F G+ LS P+ Sbjct: 11 RKRDHIRIALDPRSQTDGQNGLDSITLIHEALPDLNFKEVDISTSFFFSGESIPLSSPIF 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVL 119 ISSMT G+ K E IN LA +++ ++ M VGSQR D NA + + +R+ AP L Sbjct: 71 ISSMTAGHEKGRE-INEALARLSDRRQILMGVGSQRRELEDSNAAEEWARVRKQAPKARL 129 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+G QL + K + + A LF+HLNPLQE +QP G T+F + + I L Sbjct: 130 LGNIGIAQL-IKSPIDKIRRLIDSTEAVALFVHLNPLQEALQPEGTTDFKNGLAAIENLV 188 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD----IG 235 VP+++KE GCG S ++ +GI D++G+GGT W R+E +R ESD + Sbjct: 189 KLAGVPVIVKETGCGFSVDTLKRLSSTGIYGVDVSGKGGTHWGRVEGYRSEESDMLYHVA 248 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F +WGI T S+ A E Q ASGG+RNG++I K + LGAS G+A PFL+ A+ Sbjct: 249 QTFANWGISTKQSMLNAIDARVEYQLWASGGVRNGLEIGKLMALGASKVGVAKPFLEAAL 308 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A+ + L E V+MF G++ +++L Sbjct: 309 QGDEALEKLLTQLETELKVTMFCTGSRNLKDL 340 >gi|254262159|emb|CAZ90488.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter turicensis] Length = 349 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 189/336 (56%), Gaps = 10/336 (2%) Query: 5 RKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH++IV D + + FD W H ALPE+ D +D S + L P+LISS Sbjct: 9 RKNDHLDIVLHPDRAMSTIRTGFDAWRFEHCALPELDLDGIDLSTTLFSRPLKAPVLISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVLIS 121 MTGG + + INR+LA AA+ +AM VGSQRV D + + + +LR AP L++ Sbjct: 69 MTGGAARARD-INRHLAQAAQTLGLAMGVGSQRVALEDGAQHGLDA-QLRHIAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + IA L Sbjct: 127 NLGAAQIRGAQGLDYARRAVDMIDADALIVHLNPLQEALQGGGDRDWRGILNAIAQLVRD 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESD---IGIV 237 + VP+++KEVG G+S D+ L G+ DIAG GGTSW+ +E+ R + + + Sbjct: 187 LPVPVVVKEVGAGISP-DVACRLADVGVTMIDIAGAGGTSWAAVEAERAPTPEARNVAMA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT +L + IASGG+ NG+D K+I LGA L G A+ L A S Sbjct: 246 FADWGIPTADALRRVHLALPDIPLIASGGIANGIDAAKAIALGADLVGQAAAVLAHANAS 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DA +A +L + V+ F G+ ++ L T L Sbjct: 306 GDAAIAHFRTLIAQLRVACFCTGSANLKALRHATLL 341 >gi|229585546|ref|YP_002844048.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.16.27] gi|259491448|sp|C3N063|IDI2_SULIA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|228020596|gb|ACP56003.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.16.27] Length = 368 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 116/340 (34%), Positives = 195/340 (57%), Gaps = 11/340 (3%) Query: 4 DRKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK++H+ I + +D + F +D L+H+ P ISF E++ +F K++S P+++ Sbjct: 6 NRKVEHVEIAAFE-NVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIMV 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG N++ RIN+ +A EK + M VGSQRV A +SF + R+ AP +I Sbjct: 65 TGMTGGRNEL-GRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLS 179 +NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + + K+ +S Sbjct: 124 ANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDI 234 + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ +++ Sbjct: 184 KELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F +WG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK A Sbjct: 244 AKNFLNWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ +++ + E +M L G+K V L + +I Sbjct: 304 IEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVI 343 >gi|118431581|ref|NP_148153.2| isopentenyl pyrophosphate isomerase [Aeropyrum pernix K1] gi|152031624|sp|Q9YB30|IDI2_AERPE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116062906|dbj|BAA80768.2| isopentenyl-diphosphate delta-isomerase [Aeropyrum pernix K1] Length = 375 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 188/330 (56%), Gaps = 7/330 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++H+ ++ R + ++H PE++ +V ++F G +L PL+I+ M Sbjct: 8 RKLEHLKMIVSSKVESRESTLLEYVRIVHNPTPEVNLGDVSLEIDFCGGRLRAPLVITGM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ +E INR LA AE+ +A+ VGSQR D + ++F R+ AP+ LI+NL Sbjct: 68 TGGHPD-VEWINRELASVAEELGIAIGVGSQRAAIEDPSLARTFRAAREAAPNAFLIANL 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA QL+ + V++ AV ++ AD + +HLNP QE QP G+ + + KIA + A Sbjct: 127 GAPQLSLGYSVREVRMAVEMIDADAIAIHLNPGQEAYQPEGDPFYRGVVGKIAEAAEAAG 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----DIGIVFQ 239 VP+++KE G GLS + G+R FD+AG GGT+W +IE R ++ + G + Sbjct: 187 VPVIVKETGNGLSREAVAQLRALGVRCFDVAGLGGTNWIKIEVLRGRKAGSPLEAGPLQD 246 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG PT +L AR +A IASGG+RNG+D ++I LGA G+A P ++ + Sbjct: 247 FWGNPTAAALMEARTAAPDAYIIASGGVRNGLDAARAIALGADAAGVALPAIRSLLSGGR 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A + ++++ + +++++G RV+ L+ Sbjct: 307 QATLKLLKAIEYQLKTAVYMVGETRVRGLW 336 >gi|15806107|ref|NP_294811.1| isopentenyl pyrophosphate isomerase [Deinococcus radiodurans R1] gi|6458821|gb|AAF10661.1|AE001959_1 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 286 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 112/281 (39%), Positives = 173/281 (61%), Gaps = 7/281 (2%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE 109 FLG++L P+LI +MTGG K INRNLA AA + M +GSQRVM +A +SF Sbjct: 7 FLGRRLKAPVLIGAMTGGAEKA-GVINRNLATAARNLGLGMMLGSQRVMLEHPDAWESFN 65 Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 +R+ AP +LI NLGA Q +G ++A +AV + AD L +HLNPLQE +Q G+T + Sbjct: 66 VREVAPEILLIGNLGAAQFMLGYGAEQARRAVDEVMADALAIHLNPLQEALQRGGDTRWQ 125 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE---S 226 ++ ++ ++ +D P+++KEVG GL + + +D+AG GGTSW+R+E + Sbjct: 126 GVTYRLKQVARELDFPVIIKEVGHGLDAATLRALADGPFAAYDVAGAGGTSWARVEQLVA 185 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 H + S + G+PT +L AR AQ IASGG+R+G+D +++ LGA + + Sbjct: 186 HGQVHSPD---LCELGVPTAQALRQARKTLPGAQLIASGGIRSGLDAARALSLGAEVVAV 242 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A P L+PA+DSS+A A + + +E V++F+ G + V+E+ Sbjct: 243 ARPLLEPALDSSEAAEAWLRNFIQELRVALFVGGYRDVREV 283 >gi|308270707|emb|CBX27317.1| hypothetical protein N47_H21390 [uncultured Desulfobacterium sp.] Length = 338 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 120/298 (40%), Positives = 189/298 (63%), Gaps = 13/298 (4%) Query: 35 ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS 94 ALP+ F E+D EFLGK LS PLLI+ +TGG + RINRNLA AAE+ +AMAVGS Sbjct: 41 ALPDFLFSEMDLQCEFLGKTLSLPLLIAPLTGGCG-LSRRINRNLAEAAERMGLAMAVGS 99 Query: 95 QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 Q++M + ++ S+ LR AP+ L++N+G V + G +AV + ADGL L++N Sbjct: 100 QKLMLDNISSPDSYLLRDIAPNIPLLANVGLVHVKR--GKDYLLKAVESIEADGLILYIN 157 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDI 213 PL E++Q G +F L ++ +S+ P++LKEVG G+ ++ K+GIR D+ Sbjct: 158 PLHEVLQEGGEKDFRGLLEELEKISADFPYPIMLKEVGTGIPESVVKWAAAKNGIRGVDV 217 Query: 214 AGRGGTSWSRIE---SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF-IASGGLRN 269 AG GGT+W+RIE S ++ E +++ GI T S+ +AR + + Q+ IASGG+RN Sbjct: 218 AGLGGTNWARIEGLISGQNYE-----LYESLGIETAESILIARKHLRDEQYLIASGGIRN 272 Query: 270 GVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GV+I K++ +GA+L +A PFL A S + ++ + +L+KE V+M+ +G+ ++++ Sbjct: 273 GVEIAKALAMGANLVSMALPFLLWASHSLEEIIKGVSALKKELQVAMWCMGSINIKDM 330 >gi|327311478|ref|YP_004338375.1| isopentenyl pyrophosphate isomerase [Thermoproteus uzoniensis 768-20] gi|326947957|gb|AEA13063.1| isopentenyl pyrophosphate isomerase [Thermoproteus uzoniensis 768-20] Length = 352 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 134/337 (39%), Positives = 197/337 (58%), Gaps = 17/337 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DHI + P + D+ L+HRALPE+ D+VD FLG+++S P + Sbjct: 1 MIDKRKNDHI-FLAASPESQIGDSWLDEVVLVHRALPELDLDDVDTRTTFLGREISMPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG ++ E+IN LA AAE+ V M VGSQRV A +SFE+ + AP Sbjct: 60 IGAMTGGT-ELAEKINARLAKAAEELGVPMYVGSQRVGIVKPEARRSFEVVKANAPTVPK 118 Query: 120 ISNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q++ D ++ A +AV+++ A L +HLNP QE+ QP G F ++ ++ Sbjct: 119 IANLGAPQISRLPDDQLLRWAEEAVNMIDAAALAVHLNPAQEVFQPEGEPYFKNVLDRLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR-YFDIAGRGGTSWSRIESHRDLES--- 232 L ++ VPL++KEVG G+S GL +G+ D+AG GGTS+ IE R E+ Sbjct: 179 FLKRSLRVPLIVKEVGNGISKE--VAGLLNGVADIIDVAGAGGTSFVVIEGLRAKEARPE 236 Query: 233 --DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 ++ F+ WGIPT ++ A+ + IASGG+RNG+D K++ LGA + P Sbjct: 237 LYELAQEFKGWGIPTAAAICEAKAAF-KGPVIASGGIRNGLDGAKALGLGADYFSASQPL 295 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK A+D D V AI + KE ++MFL G +VQ+L Sbjct: 296 LKAALD--DKVAQAISRMLKELRIAMFLTGAAKVQDL 330 >gi|48477568|ref|YP_023274.1| isopentenyl pyrophosphate isomerase [Picrophilus torridus DSM 9790] gi|73920023|sp|Q6L1S1|IDI2_PICTO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|48430216|gb|AAT43081.1| hypothetical isopentenyl-diphosphate delta-isomerase [Picrophilus torridus DSM 9790] Length = 349 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 193/338 (57%), Gaps = 19/338 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI I ++ + F+DD ++HRA+PE+ F+++D V+FLGK+ ++P+L Sbjct: 1 MIENRKEEHIKI-AENENVVSEHNFWDDIRIVHRAIPEVDFNDIDTGVKFLGKQFNYPIL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN+NLA+ AE K+ M VGS RV + N +F + Sbjct: 60 ISSMTGG-TETAKIINKNLAMTAEHFKIGMGVGSMRVAVKNKNTADTFSVINDYKIPAKF 118 Query: 121 SNLGAVQL----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +N+GA QL + +++ AD L +H N LQE++QP G+ N + ++ Sbjct: 119 ANIGAPQLVRQDSDSLSDNDIEYIYNLINADFLIVHFNFLQEMVQPEGDRNSKGVIKRLK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DL 230 ++ + +V + KE G G S D L +G++ D+ G GGTS++ IE +R ++ Sbjct: 179 DIAGSYNV--IAKETGSGFSKEDALSLLDAGVKAIDVGGLGGTSFAAIEYYRAQKANDEI 236 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-FIASGGLRNGVDILKSIILGASLGGLASP 289 + G F +WGIP+P S++ YC+ + I SGGLRNG+D+ K+I+ GA+LGG A Sbjct: 237 KMHTGKAFWNWGIPSPASIK----YCSLGEPVIGSGGLRNGLDLAKAIMFGATLGGFARE 292 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK A S D V +E + + ++M L ++ + EL Sbjct: 293 LLKDANTSFDDVKRQMEMIINDLKITMMLTSSRNIDEL 330 >gi|268325057|emb|CBH38645.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon] Length = 371 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 186/337 (55%), Gaps = 17/337 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKI+ + I C + ++ F D L+H ALPE+ + +D EFLG +P++I+SM Sbjct: 7 RKIEQLQI-CTEKEVEAGVNCFADVKLVHVALPELDKEAIDLKTEFLGFPFQYPIMIASM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ ++N LA AAE + M VGSQR SF + R AP + +NL Sbjct: 66 TGGHPDT-RKVNIVLAEAAETLGIGMGVGSQRAALEGTELEDSFRVVRDVAPDLFIYANL 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA QL ++GV+ + + ++GAD + +HLN LQE IQP GN + + + I + A+ Sbjct: 125 GAPQLK-EYGVEGVERVIEMIGADAIAIHLNFLQEAIQPEGNVDASGCLAAITEVCEAIK 183 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDIGIV 237 P+++KE G G+S +L SG+ D+ G GGTS + E +R +L + +G + Sbjct: 184 KPVIVKETGAGISYTMAKLLHGSGVSAIDVGGLGGTSLAAAEIYRANAEGDELGAHLGNL 243 Query: 238 FQ-DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGI T S+ R IA+GG+RNG+DI K+I LG+ + A PFLKPAM+ Sbjct: 244 FGWNWGISTVESIVECRALPFTIPIIATGGIRNGLDIAKAIALGSDMCSAALPFLKPAME 303 Query: 297 SS------DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S D VVA I +E V+MFL G K +L Sbjct: 304 SGSIKSSVDKVVAKITEFSEELKVAMFLTGCKNTMDL 340 >gi|119094191|gb|ABL61013.1| isopentenyl-diphosphate delta isomerase isomerase Idi [uncultured marine bacterium HF10_25F10] Length = 361 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 123/303 (40%), Positives = 173/303 (57%), Gaps = 11/303 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ L H ALPE S ++D + LG+ + PL I SMTGG + IN LA AE Sbjct: 37 FERVRLEHCALPECSLADIDITTSCLGRPVEAPLFIGSMTGGTAHA-DAINAVLADTAEA 95 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A+AVGSQR S + LRQ AP LI NLG VQL G+ A +AV +G Sbjct: 96 TGIALAVGSQRA--SIESGRSQAVLRQRAPSVPLIGNLGGVQLAAPGGIDLACRAVVDIG 153 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 AD +F+HLNPLQE +QP G T++ + I L ++VP+++KEVG G+ + Sbjct: 154 ADAIFIHLNPLQEAVQPEGETDWRGVLDAIETLVGVLEVPVMVKEVGAGIGPDVAQRLFD 213 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G+ DIAG GGT+W+RIE+ R ++ + F DWG+PT +L R C A+ IASG Sbjct: 214 AGVHAVDIAGLGGTNWTRIEAARREDAALFEPFLDWGLPTVDALRAVRSACPNARLIASG 273 Query: 266 GLRNGVDILKSIILGASLGGLASPFL-------KPAMDSSDAVVAAIESLRKEFIVSMFL 318 G+ NG+D K++ LGA+L +A P L + A D + A V IE + + +++FL Sbjct: 274 GVENGLDAAKALWLGAALVSMAGPVLRVLTGDGRGAPDGA-AAVHVIERWKSQLRLALFL 332 Query: 319 LGT 321 G Sbjct: 333 TGA 335 >gi|262196596|ref|YP_003267805.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haliangium ochraceum DSM 14365] gi|262079943|gb|ACY15912.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haliangium ochraceum DSM 14365] Length = 354 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 162/296 (54%), Gaps = 9/296 (3%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DHI + +R ++ L+H+ALPE++ DE+D G L P++ Sbjct: 6 ISQRKSDHIEVAASGQADFERRTTLLEEVQLVHQALPELAVDEIDLHTTLCGLPLRAPVV 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS MTGG + INR+LA AAE V VGSQR M +F +R AP VLI Sbjct: 66 ISGMTGGTAEAAA-INRDLARAAEGAGVGFGVGSQRAMALHPELEDTFRVRDVAPDVVLI 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G VQ + GV K + + A+ + +HLNP E+IQ +G+ +F +A L Sbjct: 125 GNIGVVQAR-EMGVAKVAELAKRIEANAMAVHLNPAMELIQGDGDRDFRGAIDTVAALVD 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD----IGI 236 A+ VP++ KE GCGLS K G+R D++G GGTSW +E+ R E +G Sbjct: 184 ALRVPVIAKETGCGLSPQAAAALAKVGVRTVDVSGAGGTSWVAVEARRAAEGSAAQRLGQ 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 DWGIPT +S + E IA+GGLR+G DI ++I LGA GGLA+P L+ Sbjct: 244 ELWDWGIPTAVSTAACAAHGLE--VIATGGLRSGHDIARAIALGARCGGLAAPVLR 297 >gi|91224188|ref|ZP_01259451.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 12G01] gi|91191099|gb|EAS77365.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 12G01] Length = 339 Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 182/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFHAIDLSTEFLGHQLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG K E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGA-KDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKEVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I +L Sbjct: 123 YSNLGAAQLLDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWVGVFQAIEMLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 S + VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + Sbjct: 183 SRVKVPIIIKEVGFGISGHVAQRLIDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWG+PT L R IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGVPTATCLAQIRALHPTLPLIASGGVHNGLEAAKAIHLGANLIGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ +VV E + E ++ F G+ +V EL Sbjct: 303 STQSVVDHFEQMALELRLTCFGTGSFKVGEL 333 >gi|269968155|ref|ZP_06182188.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 40B] gi|269827223|gb|EEZ81524.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 40B] Length = 339 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 182/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFHAIDLSTEFLGHQLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG K E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGA-KDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKEVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I +L Sbjct: 123 YSNLGAAQLLDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWVGVFQAIEMLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 S + VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + Sbjct: 183 SRVKVPIIIKEVGFGISGHVAQRLIDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWG+PT L R IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGVPTATCLAQIRALHPTLPLIASGGVHNGLEAAKAIHLGANLIGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ +VV E + E ++ F G+ +V EL Sbjct: 303 STQSVVDHFEQMALELRLACFGTGSFKVGEL 333 >gi|330834018|ref|YP_004408746.1| isopentenyl pyrophosphate isomerase [Metallosphaera cuprina Ar-4] gi|329566157|gb|AEB94262.1| isopentenyl pyrophosphate isomerase [Metallosphaera cuprina Ar-4] Length = 366 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 193/332 (58%), Gaps = 10/332 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK++H+ I + + +D LIH+ALP +S +V+ FLGK LSFPL+++ Sbjct: 5 NRKLEHVEICLYEDVQGKVSTLLEDVVLIHQALPGLSLRDVNTKTRFLGKDLSFPLMVTG 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG++++ ++N +A E+ +AM VGSQRV +SF + R+ AP L++N Sbjct: 65 MTGGHDEL-GKVNATIAQVVEEMGLAMGVGSQRVAIERPETAESFRITRKMAPTAPLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS--KIALLSS 180 LG Q+ +G ++ A+ ++ AD + +HLNP QE+ QP G + LS+ K+ +S+ Sbjct: 124 LGLPQVTKGYGTKQFLDAIQMIEADAIAVHLNPAQELFQPEGEPEYP-LSALDKLKDISN 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD-----LESDIG 235 ++VP+++KE G G+S L + G + D++G+GGTSW +E R+ + Sbjct: 183 DLNVPVIIKESGTGISMETARLLDQYGFQLIDVSGQGGTSWIAVEMVRNRRKGNWKMRSS 242 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 +F WGIPT S+ +R + IASGG+R G+DI K++ LGA+L G+A+P L+ A+ Sbjct: 243 ELFAGWGIPTAASIVESRYVIPKGYLIASGGIRTGLDIAKALSLGANLAGMANPVLQHAV 302 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + E + + +M L G+K V L Sbjct: 303 KGKEQLKSFFEEVSFQLKAAMLLSGSKNVDSL 334 >gi|150402963|ref|YP_001330257.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C7] gi|150033993|gb|ABR66106.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C7] Length = 355 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 189/333 (56%), Gaps = 14/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL++++ Sbjct: 9 RKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I NL Sbjct: 68 ITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + ++V ++ AD + +H NPLQE IQP G+ NF L+ ++S Sbjct: 127 GAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKEIISKYN 186 Query: 183 DV----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + P + K+VG G S D + G DI G GGTSW+ +E +R + + + Sbjct: 187 KIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDIGGSGGTSWAAVELYRIKDEEQKNFS 246 Query: 236 IVFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + +WGIPT S LE+ + IA+GG+R G+DI KSI +GA+ G A P LK A Sbjct: 247 NQYFNWGIPTAASILEVNSVF--SGPIIATGGIRTGIDIAKSITIGANCCGTALPILKAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SS+AV A +E + KE +MFL G+ + EL Sbjct: 305 LKSSEAVTAVLERMIKELKTTMFLTGSSNLNEL 337 >gi|52549018|gb|AAU82867.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon GZfos21B5] Length = 371 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 125/337 (37%), Positives = 186/337 (55%), Gaps = 17/337 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKI+ + I C + ++ F D L+H ALPE+ + +D EFLG +P++I+SM Sbjct: 7 RKIEQLQI-CTEKEVEVEANCFADVKLVHVALPELDKEAIDLKTEFLGFSFQYPIMIASM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ ++N LA AAE + M VGSQR F SF + R AP+ + +NL Sbjct: 66 TGGHPDT-RKVNIVLAEAAETLGIGMGVGSQRAAFEGTELEASFRVVRDVAPNLFIYANL 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA QL ++GV+ + + ++GAD + +HLN LQE IQP GN + + + I + A+ Sbjct: 125 GAPQLK-EYGVEGVERVIEMIGADAIAIHLNFLQEAIQPEGNVDASGCLAAITEVCEAIK 183 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDIGIV 237 P+++KE G G+S ++ SG+ D+ G GGTS + E +R +L +G + Sbjct: 184 KPVIVKETGAGISYTMAKMLHGSGVSAIDVGGLGGTSLAAAEIYRANAEGDELGEHLGKL 243 Query: 238 FQ-DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGI T S+ IA+GG+RNG+DI K I LG+ + A PFLKPAM+ Sbjct: 244 FGWNWGISTVESIVECSALPFTIPIIATGGIRNGLDIAKGIALGSDMCSAALPFLKPAME 303 Query: 297 SS------DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S D V+A I +E V+MFL G K + +L Sbjct: 304 SGSIKSSVDKVIAKITEFSEELKVAMFLTGCKNMIDL 340 >gi|159905291|ref|YP_001548953.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C6] gi|159886784|gb|ABX01721.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C6] Length = 355 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 121/333 (36%), Positives = 189/333 (56%), Gaps = 14/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL++++ Sbjct: 9 RKLEHL-IVCDHCDVEYQKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I NL Sbjct: 68 ITGGHPKARE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + ++V ++ AD + +H NPLQE IQP G+ NF L+ ++S Sbjct: 127 GAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKEIISKYN 186 Query: 183 DV----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + P + K+VG G S D + G D+ G GGTSW+ +E +R + + + Sbjct: 187 KIHGKIPFIAKQVGEGFSKKDAIFLKEMGFDAIDVGGSGGTSWAAVELYRIKDEEQKNFS 246 Query: 236 IVFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + +WGIPT S LE+ + IA+GG+R G+DI KSI +GA+ G A P LK A Sbjct: 247 NQYFNWGIPTAASVLEVNSVF--SGPIIATGGIRTGIDIAKSIAIGANCCGTALPILKAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SS+AV A +E + KE +MFL G+ + EL Sbjct: 305 LKSSEAVTAVLERMIKELKTTMFLTGSNTINEL 337 >gi|20089493|ref|NP_615568.1| isopentenyl pyrophosphate isomerase [Methanosarcina acetivorans C2A] gi|24211814|sp|Q8TT35|IDI2_METAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|19914400|gb|AAM04048.1| isopentenyl-diphosphate delta-isomerase [Methanosarcina acetivorans C2A] Length = 365 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 131/332 (39%), Positives = 194/332 (58%), Gaps = 13/332 (3%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RKI+H+ + + P R F+D LIHRALPE++ DE+D +V+FLGK++ P LI+S Sbjct: 8 RKIEHLKLCAESPVEARGVSAGFEDVTLIHRALPELNMDELDLTVDFLGKRMQAPFLIAS 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ + +N LA AAE+ V + VGSQR D SF + R AP+ + N Sbjct: 68 ITGGHPDTLP-VNAALAAAAEELGVGIGVGSQRAAIDDPAQEDSFRVVRDKAPNAFVYGN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA Q+ +GV+ + + ++ AD L +HLN LQE IQP G+ + IA + S + Sbjct: 127 VGAAQIR-QYGVEGVEKLIEMIDADALAIHLNFLQEAIQPEGDRDATGCLDMIAEICSMV 185 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------IGI 236 +P++ KE G G+S D L K+G+ D+ G GGTSW+ +E +R ES +G Sbjct: 186 RIPVIAKETGAGISREDALLLHKAGVSAIDVGGVGGTSWAGVEVYRAKESKDPVSERLGE 245 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F D+GIPT SL +R IA+GG+R G+DI KSI LGAS A PF+ P+++ Sbjct: 246 LFWDFGIPTVASLIESR---VSLPLIATGGVRTGLDIAKSIALGASAASAALPFVGPSLE 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 ++VV + + EF +MFL G +Q L+ Sbjct: 303 GKESVVKVLSCMLDEFRAAMFLCGCANIQALH 334 >gi|169630323|ref|YP_001703972.1| isopentenyl pyrophosphate isomerase [Mycobacterium abscessus ATCC 19977] gi|169242290|emb|CAM63318.1| Isopentenyl-diphosphate delta-isomerase [Mycobacterium abscessus] Length = 322 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 175/318 (55%), Gaps = 8/318 (2%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 + V + G++R L + ALP S VD S EFLG++L+ P+LI +MTGG Sbjct: 1 MQYVTRTTGLER-------LDLPYMALPNSSLAGVDLSTEFLGRRLAAPVLIGAMTGGA- 52 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 K+ INRNLA AA++ + M +GSQRVM + ++ +F +R+ AP +LI N+G QL Sbjct: 53 KLAATINRNLAAAAQELGIGMMLGSQRVMLVEPDSADTFAVREVAPDILLIGNIGLAQLG 112 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + + V +GAD L +H NPLQE +QP G+T+F ++A L+ A++ P+LLK Sbjct: 113 NIAPAAQLNSLVRRVGADALAVHTNPLQEAVQPGGDTDFTGQVYRLAELTHAVEFPVLLK 172 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 EVG G+S + D+AG GGTSW+R+E + +WGIPT +L Sbjct: 173 EVGHGISGAAARRLGGCRLAAIDVAGAGGTSWARVEQFVRFGAITSPELAEWGIPTAEAL 232 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 I SGG+R G+D K+I LGAS+ +A P L PA+ S AVVA ++ Sbjct: 233 VEVHAELPHMPLIGSGGIRTGMDAAKAIALGASVVSVALPLLAPAVQSPQAVVAWLQQFL 292 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M + +L Sbjct: 293 DELRIAMHCADVSTIADL 310 >gi|156976153|ref|YP_001447059.1| isopentenyl pyrophosphate isomerase [Vibrio harveyi ATCC BAA-1116] gi|166226210|sp|A7N787|IDI2_VIBHB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156527747|gb|ABU72832.1| hypothetical protein VIBHAR_04924 [Vibrio harveyi ATCC BAA-1116] Length = 339 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 186/331 (56%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ VD S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAVDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVL 119 SSMTGG K E IN LA AA + +AM VGSQRV D H+ + +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGK-TIRDLAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 123 YSNLGAAQLMDKQRFDNAQRAVDFIQADALFVHLNPMQEAFQQNGDHDWIGVLKSIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 +DVP+++KEVG G+S + + +++G+ D+AG GGTSWS +E + ++ + Sbjct: 183 QRVDVPMIIKEVGFGISGVVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT LE R + IASGG+ NG++ K++ LGA+L G A LK A Sbjct: 243 LFRDWGIPTAKCLEQIRGQYPDLPLIASGGVYNGLEAAKAVHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S++++V E + E ++ F G+ ++ L Sbjct: 303 STESIVEHFEQMALELRLACFGTGSANLRAL 333 >gi|227485446|ref|ZP_03915762.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus lactolyticus ATCC 51172] gi|227236576|gb|EEI86591.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus lactolyticus ATCC 51172] Length = 337 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 187/325 (57%), Gaps = 11/325 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K G + F+D +L H +L +++FDE+D S+EFLG+K+S P++I++ Sbjct: 7 ERKDEHIENYLKTSGY--SDPLFEDVYLDHNSLSDVNFDEIDTSIEFLGRKISMPIMINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN +L+ + + MAVGSQ + D A +SF L + V I NL Sbjct: 65 MTGGGESSAD-INEDLSSICKSLNIPMAVGSQTIGLEDDEAKESFTLIR-EKDMVRIGNL 122 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA + DF A ++GA + +HLN QE+ P G+ NF I L ++D Sbjct: 123 GAERSLEDF-----KNAAGMIGAHAIQVHLNVAQELFMPEGDKNFKGYYENIKKLIKSLD 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KE G GLS + +++G++Y D++G+GGT++ IE RD ESD F DWG+ Sbjct: 178 VPIIVKETGNGLSKATCQKLIEAGVKYLDVSGKGGTNFIEIEDMRDFESDYK-EFYDWGV 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 PT ++ AR ++ I SGG++ VD+ K++ILGA + ++ L+ + S +A Sbjct: 237 PTAKAIIDARSLSDDVFIIGSGGIKTAVDVAKALILGADMTAISGEALRYLLLGSYEACY 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + + + M LLG K ++EL Sbjct: 297 DYLKEMNRRLKIVMALLGVKNIEEL 321 >gi|294496199|ref|YP_003542692.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalophilus mahii DSM 5219] gi|292667198|gb|ADE37047.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalophilus mahii DSM 5219] Length = 363 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 128/342 (37%), Positives = 198/342 (57%), Gaps = 16/342 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK++H+ + C ++ K F D L+HRALPE+ D VD S FLGKKL P Sbjct: 3 TSSRKLEHMQL-CAQQQVESRKAGPGFKDVTLVHRALPEMDMDSVDISTSFLGKKLDAPF 61 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +I+S+TGG+ IN LA AAE+T + + +GSQR D +SF + R AP+ Sbjct: 62 MIASITGGHPDTTP-INAALAEAAEETGIGIGLGSQRAAIEDPVQEESFSVVRDRAPNAF 120 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + N+GA Q+ ++G++ A + V +L AD L +HLN LQE IQP G+ + I + Sbjct: 121 VYGNIGAAQVK-EYGIEGAEKLVEMLDADALAVHLNFLQEAIQPEGDRDATGCIDAIEEI 179 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 S ++VP+++KE G G+S D L ++G+ D+ G GGTSW+ +E +R + Sbjct: 180 CS-INVPVIVKETGAGISREDALLLKEAGVAAIDVGGAGGTSWAGVEVYRAKQRGDRISG 238 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G +F D+GIPT SL R IA+GG+R G+DI KS+ LGA++ A PF+ Sbjct: 239 HLGELFWDFGIPTIPSLIECRVSL---PLIATGGVRTGLDIAKSLALGANMASAALPFVG 295 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 PA+ D+V +E + +E V+MFL G ++ L +++++ Sbjct: 296 PALKEGDSVKQRLELMFEELKVAMFLCGCPDIESLRTSSSVV 337 >gi|108762094|ref|YP_633176.1| isopentenyl pyrophosphate isomerase [Myxococcus xanthus DK 1622] gi|108465974|gb|ABF91159.1| isopentenyl-diphosphate delta-isomerase, type 2 [Myxococcus xanthus DK 1622] Length = 352 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 166/293 (56%), Gaps = 8/293 (2%) Query: 5 RKIDHINIVCKDPGID--RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK H+++ C ++ N + L+H A+PE+S ++VD S FLGK+L +PLL++ Sbjct: 9 RKDAHLDL-CSTGDVEPSGNSTLLECVKLVHCAMPEMSVEDVDLSTAFLGKRLRYPLLVT 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 MTGG + +NR+LA+ AE+ +A VGSQR M D + SF++RQ AP L+ N Sbjct: 68 GMTGGTERA-GAVNRDLALLAERHGLAFGVGSQRAMSEDASRAASFQVRQVAPTVALLGN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G Q GV + V +GADGL LHLN QE+ QP G+ +F + LL A Sbjct: 127 IGMFQ-AIGLGVDGTRRLVDGIGADGLALHLNAGQELTQPEGDRDFQGGYRVVELLVKAF 185 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVFQD 240 LL+KE GCG+ + G+R D++G GGTSW R+E R +++ +G F Sbjct: 186 GDRLLVKETGCGIGPDVARRLVDLGVRNIDVSGLGGTSWVRVEQLRASGVQAQLGAEFSA 245 Query: 241 WGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WGIPT +L R + +ASGGLR G+D K + LGA+L G+A P + Sbjct: 246 WGIPTAAALASVRRAVGPDVHLVASGGLRTGLDAAKVLALGANLAGMALPLFR 298 >gi|134046663|ref|YP_001098148.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C5] gi|132664288|gb|ABO35934.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C5] Length = 355 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/333 (36%), Positives = 188/333 (56%), Gaps = 14/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL++++ Sbjct: 9 RKLEHL-IVCDHCDVEYQKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I NL Sbjct: 68 ITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + ++V ++ AD + +H NPLQE IQP G+ NF L+ ++S Sbjct: 127 GAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKEIISKYN 186 Query: 183 D----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 +P + K+VG G S D + G D+ G GGTSW+ +E +R + + + Sbjct: 187 KLHGKIPFIAKQVGEGFSKKDTIFLKEMGFDAIDVGGSGGTSWAAVELYRIKDEEQKNFS 246 Query: 236 IVFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + +WGIPT S LE+ + IA+GG+R G+DI KSI +GA+ G A P LK A Sbjct: 247 NQYFNWGIPTAASVLEVKSVF--SGPIIATGGIRTGIDISKSIAIGANCCGTALPILKAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SS+AV +E + KE +MFL G+ + EL Sbjct: 305 LKSSEAVTTVLERMIKELKTTMFLTGSNNINEL 337 >gi|297619912|ref|YP_003708017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus voltae A3] gi|297378889|gb|ADI37044.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus voltae A3] Length = 353 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/337 (34%), Positives = 191/337 (56%), Gaps = 22/337 (6%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC+ ++ K ++ L+H+ + + S +++D S+E GKKL P++++ Sbjct: 9 RKLEHL-IVCEHCNVEYKKGTLLNNVELVHKGISKSSLEDIDTSIELFGKKLDAPIIVAG 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ + + IN+N+AIA E+ + M +GSQR ++ + + +++I NL Sbjct: 68 ITGGH-AIAKEINKNIAIAVEEMNLGMGLGSQRAAIVKKGLEDTYSVVRDYTSSLIIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + +AV ++ AD + +H NPLQE IQP G+T+F +L +++ Sbjct: 127 GAVNFMKDNWNYETVKKAVDIIDADAMAIHFNPLQEAIQPEGDTDFRNLDYLSGVINDYK 186 Query: 183 ----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 ++P + K+VG G D G D+ G GGTSWS +E +R + ++ Sbjct: 187 KYFGNMPFIAKQVGEGFCQNDGLYLNNLGFDAIDVGGSGGTSWSAVEYYRVKDEEHKNLS 246 Query: 236 IVFQDWGIPTPLSL-----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + +WGIPT S+ E ++P IA+GG+R+GVDI KS+ LGA G+A P Sbjct: 247 EKYLEWGIPTAASILDVRKEFSKP------LIATGGIRSGVDIAKSLALGADCCGIALPV 300 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK AM S + VV ESL KE ++MFL G ++EL Sbjct: 301 LKAAMKSPEEVVKLFESLIKELKITMFLTGCNNIKEL 337 >gi|194335565|ref|YP_002017359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pelodictyon phaeoclathratiforme BU-1] gi|254803427|sp|B4SCG2|IDI2_PELPB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|194308042|gb|ACF42742.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 357 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 127/352 (36%), Positives = 191/352 (54%), Gaps = 22/352 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 +RK DHI I C + N K F+ + H ALPEISF ++D S FLGK + PL Sbjct: 9 TTERKQDHIEI-CLHGDVVFNGKTTGFERFAFEHAALPEISFSDIDLSTSFLGKSIGAPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG ++ +N+ LA AAE+ + + VGS R + + +SF + R+YAP Sbjct: 68 MISSMTGGYSEA-ATLNQRLAEAAERFGIPLGVGSMRQALENRSYRESFAVVRKYAPTVQ 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + + + +L ADGL +HLN QE+ QP GNT+F + ++ALL Sbjct: 127 IFANIGAPEVAKGLTESEINTMLELLRADGLIVHLNAAQELFQPEGNTDFRHVLEQLALL 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES---HRDLESDIG 235 S+ + VP+L+KEVGCG+S+ + +G++ D+AG GG SW ++E R + Sbjct: 187 SAKIPVPVLVKEVGCGISASAARQLIAAGVKAIDVAGAGGISWQKVEEIRYTRQFGQERR 246 Query: 236 IVFQ------DWGIPTPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 Q +WGIPT +L+ P N + +ASGG+ +G+D+ KS+ LGA L Sbjct: 247 FSLQALDELLNWGIPTAQCLIDIGALKKESPGLNGIEIVASGGVGSGMDVAKSLALGAQL 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A LK D + I S + MFL GT + EL T + + Sbjct: 307 AASARALLKALHDG--VLEETITSWLNDLRAVMFLTGTATIAELRHKTLITK 356 >gi|269960127|ref|ZP_06174503.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835098|gb|EEZ89181.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 339 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 183/331 (55%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ +D S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAIDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFELRQYAPHTVL 119 SSMTGG K E IN LA AA + +AM VGSQRV D H+ + +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGK-TIRDLAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 123 YSNLGAAQLRDKQRLDNAQRAVDFIRADALFVHLNPMQEAFQQNGDHDWIGVLKSIEWLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 +DVP+++KEVG G+S + +++G+ D+AG GGTSWS +E + ++ + Sbjct: 183 QRVDVPMIIKEVGFGISGAVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT LE IASGG+ +G++ K+I LGASL G A LK A Sbjct: 243 LFRDWGIPTAKCLEQIHAQYPNLPIIASGGVHDGLEAAKAIHLGASLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ +VV E + E ++ F G+ +Q L Sbjct: 303 STQSVVDHFEQMALELRLACFGTGSANLQAL 333 >gi|254227994|ref|ZP_04921424.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio sp. Ex25] gi|262396024|ref|YP_003287877.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [Vibrio sp. Ex25] gi|151939490|gb|EDN58318.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio sp. Ex25] gi|262339618|gb|ACY53412.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [Vibrio sp. Ex25] Length = 339 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 129/330 (39%), Positives = 179/330 (54%), Gaps = 6/330 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFQAIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD-HNAIKSFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQR+ + +A +R A L Sbjct: 65 SSMTGGA-KDAEVINCRLAEAASELGIAMGVGSQRISLEERQHAGLGKTIRDLAKDVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L S Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVESIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGHVAQRLVDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTAKCLTQIRAQHPTLPLIASGGVHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + AVV E + E +S F G+ ++ L Sbjct: 304 TQAVVEHFEQMALELRLSCFGTGSSKISAL 333 >gi|303243470|ref|ZP_07329812.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanothermococcus okinawensis IH1] gi|302486031|gb|EFL48953.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanothermococcus okinawensis IH1] Length = 355 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 196/346 (56%), Gaps = 20/346 (5%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ +VC ++ K DD LIHR + + +D S+E GKKL PL++++ Sbjct: 9 RKLEHL-LVCNYCDVEYKKGTLLDDVELIHRGISNCDLNNIDTSIELFGKKLDAPLIVAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG++K E IN+N+A A E+ + M VGSQR + + I ++ + + +++I NL Sbjct: 68 ITGGHSKARE-INKNIAKAVEELNLGMGVGSQRAGLLNSSLIDTYSVVRDYTSSLVIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + ++V+++ A+ + +H NPLQE IQP G+ NF I +L + + Sbjct: 127 GAVNFIEDGWDEDIIDKSVNMVDANAMAIHFNPLQEAIQPEGDVNF----KGIYILKNTI 182 Query: 183 D--------VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + +P + K+VG G S D E+ G D+ G GGTSW+ +E HR + ++ Sbjct: 183 EDYKKKYKNIPFIAKQVGEGFSREDAEILKNIGFDGIDVGGSGGTSWAAVEYHRIKDENL 242 Query: 235 ---GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 F +WGIPT S+ R + I +GG+R+G+DI KS+ +GA G+A P L Sbjct: 243 KNFSKQFLEWGIPTAASILEVRSVF-DGTVIGTGGIRSGMDIAKSMAIGADCCGVALPIL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 K A+ SSD V+ +E + KE MFL+G +++L + +I+++ Sbjct: 302 KAALRSSDEVINVLEKMIKELKTVMFLVGCDSIEDLKKSRYIIKNE 347 >gi|45357606|ref|NP_987163.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis S2] gi|74556255|sp|Q6M174|IDI2_METMP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|45047166|emb|CAF29599.1| isopentenyl-diphosphate delta-isomerase related protein [Methanococcus maripaludis S2] Length = 355 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 120/333 (36%), Positives = 188/333 (56%), Gaps = 14/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL++++ Sbjct: 9 RKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I NL Sbjct: 68 ITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + ++V ++ AD + +H NPLQE IQP G+ NF L+ ++S+ Sbjct: 127 GAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKEIISNYN 186 Query: 183 DV----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + P + K+VG G S D + G D+ G GGTSW+ +E +R + + + Sbjct: 187 KIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDEEQKNFS 246 Query: 236 IVFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + +WGIPT S LE+ + IA+GG+R G+DI KSI +GA+ G A P LK A Sbjct: 247 NQYFNWGIPTAASILEVNSAF--SGPIIATGGIRTGIDIAKSISIGANCCGTALPILKAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SS+AV +E + KE +MFL G + EL Sbjct: 305 LKSSEAVTTVLERMIKELKTTMFLTGCNNINEL 337 >gi|219852946|ref|YP_002467378.1| isopentenyl pyrophosphate isomerase [Methanosphaerula palustris E1-9c] gi|219547205|gb|ACL17655.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosphaerula palustris E1-9c] Length = 354 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 126/343 (36%), Positives = 182/343 (53%), Gaps = 15/343 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DHI I +D +++ F LIH ALPE ++D V FLG PL I Sbjct: 7 TSSRKLDHIRICSQDE-VEQGDPGFQGVSLIHNALPECDMGKIDTGVRFLGHLFGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ + IN LA AAE+ + M VGSQR + + +F + R+ AP L Sbjct: 66 AAMTGGHPETT-VINEQLARAAERFNLGMGVGSQRAALENPDLEGTFGVVREMAPSAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G VQL D G++ A +AV ++ D L +HLN LQE IQP G+ + + +A L Sbjct: 125 ANIGVVQLR-DHGIEWADRAVEMIRGDALAVHLNFLQEAIQPEGDHDARGCMAALASLCE 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-------- 232 P+++KE G G++ +G D GRGGTSW+ IE+ R ES Sbjct: 184 EASYPVIVKETGSGIAGETARRIAGAGAAAIDTGGRGGTSWAAIEAIRADESSRDQDRHL 243 Query: 233 -DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G F WGIPT SL P IA+GG+R G+D+ K++ LGA L G+A P L Sbjct: 244 VSLGEEFLSWGIPTVTSLCEVVPA--GLPVIATGGVRTGIDMAKAVALGADLAGMALPLL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 PA+ +++ IE L + V+MFL G+ + L +I Sbjct: 302 NPALKGEESLSNTIERLLHQLKVTMFLTGSPDIAALKRTRVII 344 >gi|126465722|ref|YP_001040831.1| isopentenyl pyrophosphate isomerase [Staphylothermus marinus F1] gi|126014545|gb|ABN69923.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus marinus F1] Length = 374 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 201/343 (58%), Gaps = 26/343 (7%) Query: 2 VNDRKIDHINIVCKD----PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 + +RK++HI+I+ K+ P D K +D LIH+A P+I+ +EVD ++FLG ++ Sbjct: 5 IGERKLEHIDIILKENIDFP--DHCSKIYDSIMLIHQAFPKINLEEVDLRIDFLGYTINA 62 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFEL-RQY 113 PL+I+ MTGG+ + + +IN LA A++ +A+ VGSQR M + + ++++++ R+ Sbjct: 63 PLMITGMTGGH-RNVTKINEKLARLAQELGIAIGVGSQRPMIIYRDNSDVLETYKIVRKT 121 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-LS 172 A +I N+G +N D + + + AD L +HLNP QE+IQP G+T F+D + Sbjct: 122 AQDVPVIGNIGINTIN-DLSINDIEFLIKSIEADALAIHLNPAQEVIQPEGDTRFSDNVI 180 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---- 228 K+ + ++DVP+++KEVG G+S L GIRYFDI+G GT+W +E +R Sbjct: 181 VKVEEILDSIDVPVIIKEVGNGISMETASLFRSIGIRYFDISGSCGTNWILVEKYRSRTP 240 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + I + WGIPTPL++ R ++ IASGG+ +G+ +KS++LGA + GLA Sbjct: 241 EYKKRIADILNKWGIPTPLAIIETRNAAPDSFIIASGGVWDGLKAVKSLVLGADMVGLAK 300 Query: 289 P----FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 P +K D + + IE++R +FL+G K E Sbjct: 301 PIIYLLIKQGYDEAYKFLFTYIETIR----TVLFLIGAKNPSE 339 >gi|68164580|gb|AAY87309.1| predicted isopentenyl-diphosphate delta-isomerase [uncultured bacterium BAC17H8] Length = 344 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 115/326 (35%), Positives = 179/326 (54%), Gaps = 9/326 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK H+ + + FD L H ALPE +D + LG+ + PL I Sbjct: 6 TGDRKDAHLALAASGVALGEEDAGFDRVRLEHCALPECDLAAIDITTSCLGRAVGAPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + IN LA AE+ ++A+AVGSQR + + LR AP LI Sbjct: 66 GAMTGGTAHA-DAINTALAEVAEEARIALAVGSQRASIEAGRSQSA--LRDRAPSVPLIG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG VQL G+ A +AV L AD +F+HLNPLQE +QP G T++ + + + Sbjct: 123 NLGGVQLALPGGIDLARRAVDDLQADAIFIHLNPLQEAVQPEGQTDWRHVLAALETAVRE 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+ + + G+ D+AG GGT+W+RIE+ R ++ + F DW Sbjct: 183 LEVPVMVKEVGAGIGPEVAKRLFEVGVHAVDVAGLGGTNWTRIEAARRDDAAVFDPFLDW 242 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP----AMDS 297 G+PT ++ AR C + IASGG+R+G+D K++ LGA+L +A P L+ + + Sbjct: 243 GLPTVDAIRAARAACPNGRLIASGGVRHGLDAAKALWLGAALVSMAGPVLRALTTDGIQA 302 Query: 298 SD--AVVAAIESLRKEFIVSMFLLGT 321 D + + A++ + + +++FL G Sbjct: 303 PDPRSALQAMDRCKAQLRLALFLTGA 328 >gi|289192772|ref|YP_003458713.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus sp. FS406-22] gi|288939222|gb|ADC69977.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus sp. FS406-22] Length = 358 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 119/334 (35%), Positives = 192/334 (57%), Gaps = 16/334 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI +C ++ K +D LIH+ I+F++++ ++ GKKL+ P+++S Sbjct: 11 RKLEHI-FLCSYCDVEYEKTTLLEDIELIHKGTCGINFNDIETEIKLFGKKLAAPIIVSG 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG++K E IN+N+A A E+ + M VGSQR + N + ++ + + + ++I NL Sbjct: 70 MTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNDNLVDTYSIVRDYTNNLVIGNL 128 Query: 124 GAVQL---NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 GAV N+D V +AV ++ AD + +H NPLQEIIQP G+ NF ++ L+S+ Sbjct: 129 GAVNFIVDNWDEEV--IDKAVEMIDADAMAIHFNPLQEIIQPEGDLNFKNIYKLKELISN 186 Query: 181 AM----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLE-SD 233 ++P + K+VG G S D + G D+ G GGTSW+++E +R D E + Sbjct: 187 YKKNYKNIPFIAKQVGEGFSKEDAVILKDIGFDAIDVQGSGGTSWAKVEIYRVKDEELKN 246 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + F +WGIPT S+ + N I SGG+R+G+DI K I +G ++ P LK Sbjct: 247 LAEKFANWGIPTAASIFEVKSIYN-GIVIGSGGIRSGLDIAKCIAIGCDCCSISLPILKA 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + VV +ES KE ++MFL+G + + EL Sbjct: 306 ALKGWEEVVKVLESYIKELKIAMFLVGVENIDEL 339 >gi|270158158|ref|ZP_06186815.1| isopentenyl-diphosphate delta-isomerase type 2 [Legionella longbeachae D-4968] gi|289163582|ref|YP_003453720.1| isopentenyl pyrophosphate isomerase [Legionella longbeachae NSW150] gi|269990183|gb|EEZ96437.1| isopentenyl-diphosphate delta-isomerase type 2 [Legionella longbeachae D-4968] gi|288856755|emb|CBJ10566.1| isopentenyl pyrophosphate isomerase [Legionella longbeachae NSW150] Length = 341 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 121/328 (36%), Positives = 174/328 (53%), Gaps = 7/328 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + + D+ +LIH ALP+++FD+V LG+ + P LISSM Sbjct: 11 RKQDHIKLALMPENQTADLSTLDNINLIHEALPDLNFDDVSIKGSRLGQVVEKPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 T G+ + + INRNL A + AM VGSQR +D A + +LRQ P L SNL Sbjct: 71 TAGHRRA-KHINRNLIEACAQNGWAMGVGSQRRELTDPKAAFEWRDLRQDFPEVSLYSNL 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL + ++ + L AD L +H NPLQE IQP G T + +A L + Sbjct: 130 GIAQL-IETSIKDIQRLTDALQADALIIHCNPLQECIQPEGTTTYRGCWHALAHLIKNFE 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIVFQ 239 +P+++KE GCG S + GI D+ G GGT W RIE HR + I I FQ Sbjct: 189 LPIIVKETGCGFSRETMVRLNDIGIAAIDVGGLGGTHWGRIEGHRATDDPIRQQAAITFQ 248 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 +WGI T S+++A + SGG+ NG++ K LGA+ G A P L+ A+ SS+ Sbjct: 249 NWGIDTATSVKLAMELNPSYEIWGSGGVYNGLNAAKLFALGATTVGYAKPMLEAALKSSE 308 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++++ E V+MF G++ + +L Sbjct: 309 QVSLCMQTIEYELKVAMFCTGSRTLADL 336 >gi|73668943|ref|YP_304958.1| isopentenyl pyrophosphate isomerase [Methanosarcina barkeri str. Fusaro] gi|91207072|sp|Q46CL4|IDI2_METBF RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|72396105|gb|AAZ70378.1| isopentenyl-diphosphate delta-isomerase [Methanosarcina barkeri str. Fusaro] Length = 365 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 128/334 (38%), Positives = 193/334 (57%), Gaps = 13/334 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+ + + P R F+D LIHRALPE+ D+++ S++FLGK+L P L Sbjct: 5 TSKRKIEHLKLCAESPVESRKVSAGFEDVTLIHRALPELDMDKLNLSIDFLGKRLQAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ +N LA AAE+ + M VGSQR D +SF + R+ AP + Sbjct: 65 IASITGGHPDTTP-VNAALAAAAEELGIGMGVGSQRAAIDDPTQEESFRVVREKAPTAFI 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ +GV + + ++ AD L +HLN LQE IQP G+ + I + Sbjct: 124 YGNVGAAQIR-QYGVDGVEKLIEMIDADALAIHLNFLQEAIQPEGDRDATGCLDMIKEIC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------ 233 S + P+++KE G G+S D L K+G+ D+ G GGTSW+ +E +R +S Sbjct: 183 SVLGKPVIIKETGAGISREDSILLQKAGVSAIDVGGAGGTSWAGVEVYRARKSGDYASEH 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D+GIPT S+ +R IA+GG+R G+DI KSI LGAS A PF+ P Sbjct: 243 LGELFWDFGIPTVASIIESR---VSLPIIATGGIRTGIDIAKSIALGASAASAALPFVGP 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++ ++VV + + EF ++MFL G +Q+L Sbjct: 300 ALEGKESVVRVLSRMLDEFRIAMFLCGCANIQDL 333 >gi|28900133|ref|NP_799788.1| isopentenyl pyrophosphate isomerase [Vibrio parahaemolyticus RIMD 2210633] gi|260365783|ref|ZP_05778279.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus K5030] gi|260880705|ref|ZP_05893060.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AN-5034] gi|260897689|ref|ZP_05906185.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus Peru-466] gi|32129618|sp|Q87JH5|IDI2_VIBPA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|28808416|dbj|BAC61621.1| putative isopentenyl-diphosphate delta-isomerase [Vibrio parahaemolyticus RIMD 2210633] gi|308086205|gb|EFO35900.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus Peru-466] gi|308092710|gb|EFO42405.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AN-5034] gi|308114969|gb|EFO52509.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus K5030] Length = 339 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 181/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGARDA-ETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 123 YSNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + Sbjct: 183 PRVNVPIIIKEVGFGISGDVAQRLVDAGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ VV E + E ++ F G+ +V L Sbjct: 303 STQLVVDHFEQMALELRLACFGTGSAKVNAL 333 >gi|296243112|ref|YP_003650599.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosphaera aggregans DSM 11486] gi|296095696|gb|ADG91647.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosphaera aggregans DSM 11486] Length = 370 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 203/339 (59%), Gaps = 22/339 (6%) Query: 5 RKIDHINIVC-KDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKI H+ IV +D DR +++F D LIH+A+P D+VD S FLG +L P++I+ Sbjct: 7 RKIQHLEIVVNRDVDFKDRCEEYFRDIILIHQAIPGFRRDDVDTSTRFLGYELKAPVMIT 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS---DHNAIKSFEL-RQYAPHTV 118 +TGG + ++ +NR LA A + +A+ +GSQR + + + ++++ + R AP+ Sbjct: 67 GITGGARETLD-VNRRLAQIASQHGIALGLGSQRPILTSNFNREVVETYRVARDTAPNIP 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIAL 177 LI N+G L GVQ+ Q V + AD L +HLNP QE IQP G+T+F+ + S + Sbjct: 126 LIGNIGFNTLK-TLGVQEVKQLVDSVRADALAVHLNPAQEAIQPEGDTDFSLETLSVLRE 184 Query: 178 LSSAMDVPLLLKEVGCGLSSMDI-ELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESD 233 ++ + VP+L+KEVG GLS + ++ ++G++ FD+AG GTSW ++E +R D+ Sbjct: 185 VAREVGVPILVKEVGNGLSYEVVRKITAETGVKIFDVAGACGTSWVKVEMYRTADDVRKH 244 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP---- 289 + V +WGIPTP+S+ R ++ IASGG+ +G+ +KS+ LGA + G A P Sbjct: 245 VAQVIGEWGIPTPVSIIETRLASPDSTIIASGGVWDGLRAVKSLALGADMAGFAKPVLTR 304 Query: 290 FLKPAMDSSDAVVAA-IESLRKEFIVSMFLLGTKRVQEL 327 LK +S+ VA +ES++ MFL+G +++ +L Sbjct: 305 LLKEGFESASRFVAEYVESMK----TVMFLVGAEKLGDL 339 >gi|260899401|ref|ZP_05907796.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ4037] gi|308109287|gb|EFO46827.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ4037] Length = 339 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 181/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGARDA-ETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 123 YSNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + Sbjct: 183 PRVNVPIIIKEVGFGISGDVAQRLVDAGVGAIDVAGAGGTSWSAVEGYCQDNPHMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ VV E + E ++ F G+ +V L Sbjct: 303 STQLVVDHFEQMALELRLACFGTGSAKVNAL 333 >gi|34327948|dbj|BAC82425.1| hypothetical protein [Sulfolobus acidocaldarius] Length = 307 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 178/284 (62%), Gaps = 9/284 (3%) Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +I+ MTGG N++ RIN +A E+ +AM VGSQR+ ++F++ R+ AP++ Sbjct: 1 MITGMTGGTNEL-GRINGIIAEVIEEIGIAMGVGSQRIAIEKPEVRETFKIARRNAPNSP 59 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIAL 177 +I+NLGA QL +G+++ +AV +L AD + +H NP QE+ QP G ++ ++ KI Sbjct: 60 IIANLGAPQLTRGYGLKQIEEAVQMLEADAIAIHFNPSQEVFQPEGEPDYPMEILDKIRD 119 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ES 232 +S A+ VP+++KE GLS + L +G RYFD++G+GGTSW +E R L ++ Sbjct: 120 VSKALSVPIIIKESSGGLSKEFVSLFYSNGFRYFDLSGQGGTSWVAVEMFRGLRRNNWKA 179 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + +F DWGIPT ++ R +A I SGG+RNG++++KSI LGA++GG A P LK Sbjct: 180 ESAKLFSDWGIPTAATIIETRVSAPDAFVIGSGGVRNGLEVVKSISLGANIGGFALPALK 239 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ +A+ ++ + E +MFL+G+K V+++Y T L+ H Sbjct: 240 AAIRGKEALKQFLQQVIFEIKAAMFLIGSKTVRDVY-KTPLVIH 282 >gi|20094213|ref|NP_614060.1| isopentenyl pyrophosphate isomerase [Methanopyrus kandleri AV19] gi|19887238|gb|AAM01990.1| L-lactate dehydrogenase (FMN-dependent) [Methanopyrus kandleri AV19] Length = 374 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 189/332 (56%), Gaps = 9/332 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +H+ + FD ++HRALPE+ FD+VD +E GK+LSFPL+I Sbjct: 10 MRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLII 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG+ K E INR LA A + ++ + VGSQR D +FE +R+ P +++ Sbjct: 70 AGMTGGHPKTGE-INRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + G A + V ++ AD L +H+N LQE +Q G + A +A + Sbjct: 129 ANIGLPQLREN-GPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVDVLAEVCE 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIV 237 +DVP++LKE G G+S+ D +L ++ + D+ G GGT+W+ +E+ R E +G Sbjct: 188 TVDVPVVLKETGAGVSAEDAKL-VRDIVDGIDVGGAGGTNWAVVEAVRSKAHGEIPLGYA 246 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM- 295 F DWG+PT S LE+ N+ I +GG+R G+D+ K + LGA G+A P L+ + Sbjct: 247 FSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLA 306 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++S+ +E ++M + G V+E+ Sbjct: 307 EGVRGCVRFLKSIAREVKIAMLMAGCSSVEEM 338 >gi|32129640|sp|Q8TX99|IDI2_METKA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 365 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 189/332 (56%), Gaps = 9/332 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +H+ + FD ++HRALPE+ FD+VD +E GK+LSFPL+I Sbjct: 1 MRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLII 60 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG+ K E INR LA A + ++ + VGSQR D +FE +R+ P +++ Sbjct: 61 AGMTGGHPKTGE-INRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVL 119 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + G A + V ++ AD L +H+N LQE +Q G + A +A + Sbjct: 120 ANIGLPQLREN-GPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVDVLAEVCE 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIV 237 +DVP++LKE G G+S+ D +L ++ + D+ G GGT+W+ +E+ R E +G Sbjct: 179 TVDVPVVLKETGAGVSAEDAKL-VRDIVDGIDVGGAGGTNWAVVEAVRSKAHGEIPLGYA 237 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM- 295 F DWG+PT S LE+ N+ I +GG+R G+D+ K + LGA G+A P L+ + Sbjct: 238 FSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLA 297 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++S+ +E ++M + G V+E+ Sbjct: 298 EGVRGCVRFLKSIAREVKIAMLMAGCSSVEEM 329 >gi|153837093|ref|ZP_01989760.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ3810] gi|149749681|gb|EDM60426.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ3810] Length = 339 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 180/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGARDA-ETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 123 YSNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 ++VP+++KEVG G+S + + G+ D+AG GGTSWS +E + + Sbjct: 183 PRVNVPIIIKEVGFGISGDVAQRLVDVGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ VV E + E ++ F G+ +V L Sbjct: 303 STQLVVDHFEQMALELRLACFGTGSAKVNAL 333 >gi|328470114|gb|EGF41025.1| isopentenyl pyrophosphate isomerase [Vibrio parahaemolyticus 10329] Length = 339 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 180/331 (54%), Gaps = 8/331 (2%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVL 119 SSMTGG E IN LA AA + +AM VGSQR+ S H+ + +R+ A L Sbjct: 65 SSMTGGARDA-ETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGK-TIRELAKGVPL 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 123 YSNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLK 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GI 236 ++VP+++KEVG G+S + + G+ D+AG GGTSWS +E + + Sbjct: 183 PRVNVPIIIKEVGFGISGDVAQRLVDVGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAE 242 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A Sbjct: 243 LFRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATI 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ VV E + E ++ F G+ +V L Sbjct: 303 STQLVVDHFEQIALELRLACFGTGSAKVNAL 333 >gi|120403168|ref|YP_952997.1| isopentenyl pyrophosphate isomerase [Mycobacterium vanbaalenii PYR-1] gi|166918476|sp|A1T741|IDI2_MYCVP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119955986|gb|ABM12991.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium vanbaalenii PYR-1] Length = 342 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 120/325 (36%), Positives = 177/325 (54%), Gaps = 5/325 (1%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK HI+ VC +D F+ + L + AL + VD S EFLG L P+LI Sbjct: 12 RKRRHID-VCLTEAVDYQSLTTGFERYRLPYNALTQTDLHSVDLSTEFLGSHLRAPVLIG 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 +MTGG + INRNLA AA++ + M +GSQRVM D A SFE+R AP +LI N Sbjct: 71 AMTGGA-ALSGIINRNLAAAAQQLGIGMMLGSQRVMIDDEAAAASFEVRGVAPDILLIGN 129 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G QL V A+ +GA+GL +H NPLQE +Q +G+T+F+ ++ ++ A+ Sbjct: 130 IGLAQLRSSM-VPGLAAALDRVGANGLAVHTNPLQEAMQHDGDTDFSGSIGRLCDVAGAI 188 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P++LKEVG G+ + + I D+AG GGTSW+RIE +WG Sbjct: 189 GYPVVLKEVGHGIGAAAAAELVGCPIAAIDVAGAGGTSWARIEQFVRYGDVRYPALAEWG 248 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 +PT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S +AVV Sbjct: 249 VPTAQALTEVRQMLPDVPLVASGGIRTGMDAAKALAMGARVVAVARPLLAPAVESVEAVV 308 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ E +V + G + L Sbjct: 309 DWLQRFIDELLVCLHGCGAANLSAL 333 >gi|257076371|ref|ZP_05570732.1| isopentenyl pyrophosphate isomerase [Ferroplasma acidarmanus fer1] Length = 349 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 128/342 (37%), Positives = 193/342 (56%), Gaps = 27/342 (7%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HINI ++ + F+DD LIHRA+PE+ +D ++ + FLG + P L Sbjct: 1 MIENRKEEHINI-AENMNVTSEHNFWDDIRLIHRAIPEVDYDSINTKINFLGTEFGLPFL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG K +IN NLA AAE+ K+ M VGS R + N +F + Sbjct: 60 ISSMTGGTEKA-RKINENLARAAEEFKIGMGVGSMRAAIENKNIADTFSVINNYKIPARF 118 Query: 121 SNLGAVQLNYDFGVQKA-------HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 +N+GA QL G +K +++GA L +H N LQE++QP G+ N + S Sbjct: 119 ANIGAPQL---IGQEKPPISDKDIEYIFNLIGAKYLIVHFNFLQEMVQPEGDKNARGVMS 175 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLK-SGIRYFDIAGRGGTSWSRIESHR---- 228 ++ + A P++ KE G G S D L LK +G++ D+ G GGTS++ IE +R Sbjct: 176 RLKEI--AKSYPVIAKETGSGFSRDD-ALELKDAGVKAIDVGGLGGTSFAAIEYYRAEKI 232 Query: 229 --DLESDIGIVFQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGG 285 + G F +WG+P+P S++ +C+ I SGG+RNG D++KSII+GA +G Sbjct: 233 QNKEKMHTGQTFWNWGVPSPASIK----FCSVGLPIIGSGGIRNGQDVVKSIIMGADMGA 288 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A FLK A S + +V I+++ K+ +SMFL +K V EL Sbjct: 289 MARNFLKDADTSYEDLVFHIKNIIKDIKISMFLTASKDVSEL 330 >gi|305662642|ref|YP_003858930.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignisphaera aggregans DSM 17230] gi|304377211|gb|ADM27050.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignisphaera aggregans DSM 17230] Length = 380 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 192/336 (57%), Gaps = 18/336 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWH----LIHRALPEISFDEVDPSVEFLGKKLSF 57 + +RK DHI++ D ++ D W L+H+A+ ++SFD++D SV FLG KL F Sbjct: 9 IENRKWDHISLALDD----YSQGPIDTWLSCVVLVHQAVADLSFDDIDTSVYFLGYKLKF 64 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL+IS MTGG +K E +N++LA A + + + VGSQR M + + I ++++ + H Sbjct: 65 PLIISGMTGGFSKAYE-LNKSLAEIAYRYGIGIGVGSQRAMLINSDTIHTYKIVREIAHG 123 Query: 118 V-LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 + +I+N+G QL + G A + V + AD L +HLN LQE++Q G+ F I Sbjct: 124 IPVIANIGIAQL-IELGPNIAEKVVEAIEADALAIHLNMLQELVQLEGDRVFKGYIDAIR 182 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLE 231 + + VP+++KEVG G+S + + GI+ D+AG GGT+W +IE R ++ Sbjct: 183 NVVERVKVPVIVKEVGHGISYELAKKLAEIGIQIIDVAGMGGTNWVKIELARYKDTKNIV 242 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + F WGIPT S+ R IASGG+RNG+DI KSI LGA + G+A PFL Sbjct: 243 MEASKEFITWGIPTGASIVEVRSALRTGIVIASGGIRNGIDIAKSIALGADICGMAQPFL 302 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K M+++ + IE + + ++M L +K + L Sbjct: 303 KAVMNNTAEMF--IEKIIYQLKMAMMLTSSKDINAL 336 >gi|70605941|ref|YP_254811.1| isopentenyl pyrophosphate isomerase [Sulfolobus acidocaldarius DSM 639] gi|68566589|gb|AAY79518.1| isopentenyl-diphosphate delta-isomerase [Sulfolobus acidocaldarius DSM 639] Length = 303 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 109/280 (38%), Positives = 175/280 (62%), Gaps = 9/280 (3%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG N++ RIN +A E+ +AM VGSQR+ ++F++ R+ AP++ +I+N Sbjct: 1 MTGGTNEL-GRINGIIAEVIEEIGIAMGVGSQRIAIEKPEVRETFKIARRNAPNSPIIAN 59 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLSSA 181 LGA QL +G+++ +AV +L AD + +H NP QE+ QP G ++ ++ KI +S A Sbjct: 60 LGAPQLTRGYGLKQIEEAVQMLEADAIAIHFNPSQEVFQPEGEPDYPMEILDKIRDVSKA 119 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESDIGI 236 + VP+++KE GLS + L +G RYFD++G+GGTSW +E R L +++ Sbjct: 120 LSVPIIIKESSGGLSKEFVSLFYSNGFRYFDVSGQGGTSWVAVEMFRGLRRNNWKAESAK 179 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F DWGIPT ++ R +A I SGG+RNG++++KSI LGA++GG A P LK A+ Sbjct: 180 LFSDWGIPTAATIIETRVSAPDAFVIGSGGVRNGLEVVKSISLGANIGGFALPALKAAIR 239 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A+ ++ + E +MFL+G+K V+++Y T L+ H Sbjct: 240 GKEALKQFLQQVIFEIKAAMFLIGSKTVRDVY-KTPLVIH 278 >gi|84626172|gb|ABC50109.1| isopentenyl pyrophosphate isomerase [Brevundimonas vesicularis] Length = 347 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 120/321 (37%), Positives = 182/321 (56%), Gaps = 5/321 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI+ V G+ + D +H ALP+I D +D + FLG++++ P LISSM Sbjct: 11 RKDEHIDHVRAGRGVSQTTSGLDAVRFVHDALPDIDHDAIDLATRFLGRRVALPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-SDHNAIKSFELRQYAPHTVLISNL 123 TGG ++ E IN LA AA+ V +AVGSQRV +D +LR+ AP ++++NL Sbjct: 71 TGGPSRA-EAINARLAEAAQALGVVLAVGSQRVALETDGGLGLGLDLRRRAPDAMILANL 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ +GV +A +A+ ++GAD L LHLNPLQE +QP G+ ++ ++ I +++A Sbjct: 130 GAVQFALGYGVDEARRAMEMIGADALILHLNPLQEGVQPEGDRDWRGVARGIERVAAAFP 189 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVFQD 240 L++KE G GLS G+ D+AG GGT+W IE R + F Sbjct: 190 GRLIVKETGAGLSGAVARRLADMGVAALDVAGAGGTNWGLIEGARATGGRAEALAAPFAA 249 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT SL E I SGG+R+G+D ++I LGA L G A+ L+ A+ ++A Sbjct: 250 WGVPTARSLLNCAQAAPELDLIGSGGIRDGLDAARAIRLGACLVGQAAGVLEAALTGTEA 309 Query: 301 VVAAIESLRKEFIVSMFLLGT 321 VV ++ + + ++ F G+ Sbjct: 310 VVDHLDLMAAQLRLACFCTGS 330 >gi|150401607|ref|YP_001325373.1| isopentenyl pyrophosphate isomerase [Methanococcus aeolicus Nankai-3] gi|171460866|sp|A6UW89|IDI2_META3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|150014310|gb|ABR56761.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus aeolicus Nankai-3] Length = 356 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 22/355 (6%) Query: 1 MVND---RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS 56 M ND RK++H+ VC ++ K +D LIH + +++D S+ GK L Sbjct: 1 MSNDIEFRKLEHL-FVCNYCDVEYKKGTLLEDVELIHSGISNCDLEDIDTSINLFGKNLG 59 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH 116 P++++++TGG++K E IN+N+AIA ++ + M VGSQR + ++++ + + Sbjct: 60 APIIVAAITGGHSKAKE-INKNIAIAIDELNLGMGVGSQRAALINEELMETYSVVRDYTS 118 Query: 117 TVLISNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS--- 172 ++++ NLGAV D + + H+AV ++ ADG+ +H NPLQE IQP G+ NF + Sbjct: 119 SLVLGNLGAVNFIEDGWDEETIHKAVEMIDADGMAIHFNPLQEAIQPEGDYNFKGIEILK 178 Query: 173 ------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +K S +P + K+VG G S D L G D+ G GGTSW+ +E Sbjct: 179 DIMENYNKTYNNKSNKKIPFIAKQVGEGFSKEDALLLNGLGFDSIDVGGSGGTSWAAVEY 238 Query: 227 HR--DLESD-IGIVFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 +R D ES + +WGIPT S LE+ + + + IA+GG+R+G+DI KS+ +GA Sbjct: 239 YRIKDEESKKFSKKYLEWGIPTAASILEVKQNF--DKPIIATGGIRSGMDIAKSMAIGAQ 296 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 G+A P LK A+ S+ V+ IE+ +E +MFL+G V EL + +I+++ Sbjct: 297 CCGVALPVLKAALRGSEDVIKLIENYIEELKTTMFLMGCDNVNELMNSRYIIKNE 351 >gi|189345860|ref|YP_001942389.1| isopentenyl pyrophosphate isomerase [Chlorobium limicola DSM 245] gi|254803425|sp|B3EFC7|IDI2_CHLL2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189340007|gb|ACD89410.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium limicola DSM 245] Length = 360 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 119/350 (34%), Positives = 187/350 (53%), Gaps = 19/350 (5%) Query: 4 DRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK +H+ I + G DR FD+ IH ALPEI F ++D S FLG+K+ PL+IS Sbjct: 11 ERKHNHVEICLHEAVGFDRKSAGFDEIEFIHNALPEIRFSDIDLSTTFLGRKIGAPLMIS 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG K +NR A AAE + + +GS R + +SF + R+YAP + + Sbjct: 71 SMTGGFEKA-SLLNRRFAEAAEHFGIPLGIGSMRQALENSTQKESFAIVRKYAPSVPVFA 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ + ++ AD L +HLN QE+ QP GNT+F + +++ L + Sbjct: 130 NIGAPEVARGLSASDIGILLELIEADALIVHLNAAQELFQPEGNTDFRHVLDQLSHLCAT 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES-----HRDLESDIGI 236 + VP+++KEVGCG+S + + L +G++ D+AG GG SW ++E R+ E+ Sbjct: 190 VPVPVIVKEVGCGISGVCAQRVLDAGVKVIDVAGAGGISWQKVEEIRYVRQRERENRFSP 249 Query: 237 VFQD----WGIPTPLSLE-----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D WGIPT + + + IASGG+R+G+DI KS+ LGA +G A Sbjct: 250 EALDDLLNWGIPTARCIAEVSDLKKHTVHTDFEIIASGGIRSGLDIAKSLALGARIGASA 309 Query: 288 SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 L A + + + IE+ + +FL GT +L +++H+ Sbjct: 310 GQLLNAAHE--ERLEETIETWLNDLRAVLFLTGTTSPDKLQKQHLILKHR 357 >gi|296109426|ref|YP_003616375.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus infernus ME] gi|295434240|gb|ADG13411.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus infernus ME] Length = 354 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/335 (35%), Positives = 191/335 (57%), Gaps = 20/335 (5%) Query: 5 RKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI +C ++ ++ + LIH+ I+FD+++ V+ GK+LS P+++S Sbjct: 6 RKLEHI-FLCSHCNVEYDRSTLLECIELIHKGTSNINFDDINTEVKLFGKRLSAPIIVSG 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + E IN+N+A A E+ + M +GSQR + ++ + + +++I NL Sbjct: 65 MTGGF-RGAEEINKNIAKAVEELNLGMGLGSQRAAIVNKELEDTYRVVRDYTESLVIGNL 123 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + ++ +A+ ++ AD L +H NPLQEIIQP G+ NF ++S K+ + S Sbjct: 124 GAVNFIKDGWDLEVIDRAIEMIDADALAIHFNPLQEIIQPEGDVNFKNISEKLKDIISEY 183 Query: 183 ----DVPLLLKEVGCGLSSMDIELGLKSGIRYFD---IAGRGGTSWSRIESHR--DLES- 232 DVP + K+VG G S D + YFD + G GGTSW+++E +R D E Sbjct: 184 KKHRDVPFIAKQVGEGFSKED-----AKELEYFDAIDVQGSGGTSWAKVEYYRVKDKEKR 238 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I F +WGIPT S+ + N+ I SGGLR+G+DI K + LG S +A P L+ Sbjct: 239 EILKNFLNWGIPTAQSILEVKSSYNKI-IIGSGGLRSGIDIAKCLALGCSCTAVALPVLR 297 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + VV + +E ++MFL+G + ++EL Sbjct: 298 AALKGYEKVVELLSKYIEELKITMFLVGAENIEEL 332 >gi|162450032|ref|YP_001612399.1| isopentenyl pyrophosphate isomerase [Sorangium cellulosum 'So ce 56'] gi|161160614|emb|CAN91919.1| idi [Sorangium cellulosum 'So ce 56'] Length = 362 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/331 (35%), Positives = 182/331 (54%), Gaps = 8/331 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DHI + D G + LIH ALPE+S D +D SV LGK+L PLL Sbjct: 8 ISERKADHIELCATGDVGFRAKTTLLEQVELIHDALPELSLDAIDTSVLLLGKRLRVPLL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG + INR L+ AE+ +GSQR M + +A ++E+R +AP T+L+ Sbjct: 68 IAAMTGGTERA-HAINRELSRIAEERGYGFGLGSQRAML-NGDASATYEVRAHAPTTLLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQ + V +GAD L +H+NP E++QP G+ +FA + L+S Sbjct: 126 GNIGAVQAR-SLSTEAVADLVAQVGADALCVHMNPAMELVQPGGDRDFAGALDAMGRLAS 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW--SRIESHRDLESDIGIVF 238 + VP++ KE GCG+ +++G+R D++G GGTSW +G Sbjct: 185 GLSVPVVAKETGCGIGPGTAYRLVRAGVRDLDVSGAGGTSWVAVEAARAEGAARSLGEAL 244 Query: 239 QDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 ++WG+PT S+ +AR IA+GG+ +G+D+ +++ LGA G+A P L+ + Sbjct: 245 REWGVPTAASVLIARAIRPRFKTIIATGGITSGLDVARALALGAHAAGIARPVLQAFVSG 304 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DA V +ES+ E M L+G + V L Sbjct: 305 GRDAAVRYLESVEAELRAVMLLVGARDVASL 335 >gi|145224766|ref|YP_001135444.1| isopentenyl pyrophosphate isomerase [Mycobacterium gilvum PYR-GCK] gi|315445096|ref|YP_004077975.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. Spyr1] gi|189044240|sp|A4TE63|IDI2_MYCGI RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145217252|gb|ABP46656.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium gilvum PYR-GCK] gi|315263399|gb|ADU00141.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. Spyr1] Length = 342 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 178/325 (54%), Gaps = 5/325 (1%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK HI++ DP +D F+ + L + AL + VD EF+G +L P+LI Sbjct: 12 RKRRHIDVCLTDP-VDYQTLTTGFERYQLPYNALTQTDLHSVDLGTEFMGSRLRAPVLIG 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 +MTGG + INRNLA AA++ V M +GSQRVM D A +SF++R AP ++I N Sbjct: 71 AMTGGA-ALSGIINRNLAEAAQQLGVGMMLGSQRVMIDDAVAAESFDVRGVAPDVLVIGN 129 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G QL V A+ +GA+GL +H NPLQE +Q NG+T+F+ S++ + ++ Sbjct: 130 IGLAQLQPSM-VPALAAALDRVGANGLAVHTNPLQEAMQHNGDTDFSGSMSRLREVVDSL 188 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P++LKEVG G+ + + + D+AG GGTSW+RIE +WG Sbjct: 189 GYPVMLKEVGHGIGASAAAQLVDCPVAAVDVAGAGGTSWARIEQFVRYGEVRYPALAEWG 248 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 IPT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S AVV Sbjct: 249 IPTAQALTEVRGILPDVPLVASGGIRTGMDAAKALAMGAEVVAIARPLLAPAVESVGAVV 308 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ E +V + G + L Sbjct: 309 DWLQRFIDELLVCLHGSGAANLSAL 333 >gi|261402404|ref|YP_003246628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus vulcanius M7] gi|261369397|gb|ACX72146.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus vulcanius M7] Length = 359 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/341 (33%), Positives = 198/341 (58%), Gaps = 14/341 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI +C ++ +K ++ L+HR ++F++++ ++ GK+LS P+++S Sbjct: 14 RKLEHI-FLCSYCDVEYDKTTLLENVELVHRGTCGVNFNDIETEIKLFGKRLSAPIIVSG 72 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG++K E IN+N+A A E+ + M VGSQR + + I+++ + + ++I NL Sbjct: 73 MTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNEDLIETYSIVRDYTSNLVIGNL 131 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + +AV ++ AD + +H NPLQEIIQP G+ NF ++ ++++ Sbjct: 132 GAVNFIVDKWDEEIVDRAVEMIDADAMAIHFNPLQEIIQPEGDLNFKNMVKIKNVITNYK 191 Query: 183 ----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV- 237 ++P + K+VG G S D + + G DI G GGTSW+++E +R +++ + Sbjct: 192 RKYKNIPFIAKQVGEGFSREDALILKEIGFDAIDIQGSGGTSWAKVEIYRVKDANTKKLL 251 Query: 238 --FQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 F DWGIPT S+ E+ Y + I SGG+R+G+DI K I +G +A P LK + Sbjct: 252 KKFSDWGIPTAASIFEVKSVY--DRVVIGSGGIRSGLDIAKCIAIGCDCCSVALPILKAS 309 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + VV +E+ KE ++MFL+G + + EL +I+ Sbjct: 310 LKGWEEVVNVLENYIKELKIAMFLVGAENIIELKKTPYIIK 350 >gi|256811063|ref|YP_003128432.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus fervens AG86] gi|256794263|gb|ACV24932.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus fervens AG86] Length = 359 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 118/335 (35%), Positives = 190/335 (56%), Gaps = 18/335 (5%) Query: 5 RKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI +C ++ K +D LIH+ I+F +++ + GKKLS P+++S Sbjct: 11 RKLEHI-FLCNYCDVEYKKTTLLEDIELIHKGTCGINFYDIETETKLFGKKLSAPIIVSG 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG++K E IN+N+A A E+ + M VGSQR + + I ++ + + + ++I NL Sbjct: 70 ITGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIINDDLIDTYSVVRDYTNNLVIGNL 128 Query: 124 GAVQL---NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS- 179 GAV N+D V +AV ++ AD + +H NPLQE+IQP G+ NF +L ++S Sbjct: 129 GAVNFIVDNWDEEV--VDKAVEMIDADAMAIHFNPLQEVIQPEGDLNFKNLDKLKEIISN 186 Query: 180 ---SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 S ++P + K+VG G S D + G D+ G GGTSW+++E +R + I Sbjct: 187 YKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVKDEKIKN 246 Query: 237 V---FQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + F +WGIPT S+ E+ Y + I SGG+R G+DI K I +G +A P LK Sbjct: 247 LLEKFANWGIPTAASIFEVKSVY--DGIVIGSGGIRGGLDIAKCIAIGCDCCAVALPILK 304 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + VV +E KE ++MFL+G + ++EL Sbjct: 305 ASLKGWEEVVKVLEEYIKELKIAMFLVGAENIEEL 339 >gi|297527605|ref|YP_003669629.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus hellenicus DSM 12710] gi|297256521|gb|ADI32730.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus hellenicus DSM 12710] Length = 375 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 118/341 (34%), Positives = 197/341 (57%), Gaps = 22/341 (6%) Query: 2 VNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK++HI+I+ K+ D + +D L+H+A P+I +E D ++FLG + PL Sbjct: 5 IGERKLEHIDIILKENVDFSDHCSEIYDSIMLVHQAFPKIDLEETDLRIDFLGYTIKAPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFEL-RQYAP 115 +I+ MTGG+ + + +IN LA A++ +A+ VGSQR M + + +K++ + R+ A Sbjct: 65 MITGMTGGH-RNVTKINEKLARLAQELGIAIGVGSQRPMIIYRENSDVLKTYRIVRKTAQ 123 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-LSSK 174 +I N+G +N D + + + AD L +HLNP QE IQP G+T F+D + +K Sbjct: 124 DVPVIGNIGINTIN-DLSINDVEFLIKSIEADALAIHLNPAQEAIQPEGDTRFSDNVIAK 182 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR----DL 230 I + +DVP+++KEVG G+S L GIRYFD++G GT+W +E +R + Sbjct: 183 IEEVLDNIDVPVIIKEVGNGISMETASLFRSIGIRYFDVSGSCGTNWILVEKYRSRTPEY 242 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 + I + WGIPTPL++ R ++ IASGG+ +G+ +KS++LGA++ G+A P Sbjct: 243 KRRIAEILSKWGIPTPLAIIETRNAAPDSFIIASGGVWDGLKAVKSLVLGANMVGIAKPI 302 Query: 290 ---FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK + + + + IE++R +FL+G K E Sbjct: 303 IYLLLKQGYNKAYEFLYTYIETIR----TILFLIGAKNPNE 339 >gi|218884667|ref|YP_002429049.1| isopentenyl pyrophosphate isomerase [Desulfurococcus kamchatkensis 1221n] gi|218766283|gb|ACL11682.1| isopentenyl-diphosphate delta-isomerase [Desulfurococcus kamchatkensis 1221n] Length = 390 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/339 (34%), Positives = 194/339 (57%), Gaps = 16/339 (4%) Query: 2 VNDRKIDHINIVCKDPGID---RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 + +RK+ HI + DP +D + + + L+H+ALP + FDEVD FLG +L P Sbjct: 22 IQNRKLHHIRLAL-DPRVDFKDHCSEIYREIQLVHQALPGLDFDEVDVKQVFLGYRLEAP 80 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH---NAIKSFEL-RQYA 114 ++I+ MTGG+ ++ IN+ LA AEK +VA+ VGSQR + + + + S+ + R+ A Sbjct: 81 IMITGMTGGHPSLVS-INKMLATLAEKKRVAIGVGSQRAIVKSNFSEDVVASYRIVRETA 139 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSS 173 +I N+G L D + V V+ AD + +HLNP QE+IQP G+T F+ D+ Sbjct: 140 RSVPVIGNIGLNTLR-DIDTDTVIRLVEVIDADAIAIHLNPAQEVIQPEGDTRFSLDVID 198 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL--- 230 K+ L +++ P+++KEVG GLS + + G++ +D AG GT+W+ +E+ R+ Sbjct: 199 KVKELVASLRKPVIIKEVGNGLSMETVRIFHNIGVKIYDTAGACGTNWALVETLRNQPGS 258 Query: 231 -ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + G+ +WGIPTPLS+ R ++ IASGG+ +G +I +GA + G+A P Sbjct: 259 SRYECGLKLSEWGIPTPLSVIETRYVAEDSFIIASGGVWDGFKAAVNIAIGADMVGVAKP 318 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK +D+ + A +++ E +MFL G + + EL Sbjct: 319 ILKNILDNGLERAEAYLDNYIFELKTAMFLSGARNIGEL 357 >gi|189499393|ref|YP_001958863.1| isopentenyl pyrophosphate isomerase [Chlorobium phaeobacteroides BS1] gi|189494834|gb|ACE03382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeobacteroides BS1] Length = 357 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/346 (34%), Positives = 182/346 (52%), Gaps = 30/346 (8%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H+ K + D F+ + H A PEI+ ++D + FLG ++S+P +IS Sbjct: 10 NRKQSHVETCLKRNVCFDTKTTGFERYEFTHNAAPEINHSDIDLATSFLGHRISYPFMIS 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG + E +NR LA AEK + + VGS R + + +SF + RQ AP +++ Sbjct: 70 SMTGGYEQA-ENLNRILAQTAEKLGIPLGVGSMRQALENASFRESFSVVRQSAPSVPVLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ ++ + ++ AD L +HLNP QE+ QP GNT F + +++ ++ Sbjct: 129 NIGAPEIAQGLTKKELDTLIDIVRADALIVHLNPAQELFQPEGNTRFKNFLTQLKKITET 188 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ-- 239 + VP+++KEVGCG+S + ++ G+ DIAG GG SW ++E R L+ FQ Sbjct: 189 LKVPVIVKEVGCGISPETAKNLVEKGVTIIDIAGAGGISWQKVEEERYLQQ-----FQHE 243 Query: 240 ------------DWGIPTPLS------LEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 +WGIPT S L+ + Q IASGG+ NGVDI K+I LGA Sbjct: 244 NRFSPSALEELLNWGIPTARSLTGVAALKSNNTHYRHIQIIASGGISNGVDIAKAIALGA 303 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A LK + + I + + MFL GTK +++L Sbjct: 304 DLCASAGQMLKALHEQR--LEETILTWMNDLKAVMFLTGTKDIRQL 347 >gi|313887573|ref|ZP_07821256.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846451|gb|EFR33829.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 338 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 119/326 (36%), Positives = 189/326 (57%), Gaps = 12/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + + F D L + +LPEI++DE+D S+ FL KK+ FPL+I++M Sbjct: 5 RKTEHIENFLRSTYV--GDPLFSDIFLYNDSLPEINYDEIDTSLNFLNKKVKFPLMINAM 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ + E INR+LA A + + MAVGSQ + D ++ KSFE+ R+ ++ISNL Sbjct: 63 TGGSD-LSEEINRSLANVAAEYDLPMAVGSQTIALEDKDSRKSFEIVREIIKDGIVISNL 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + A AV +L AD + +HLNP QE++Q G NF + + I + + + Sbjct: 122 SGFA-----STEDAKLAVDLLRADAIQIHLNPAQELVQVEGERNFCGILNNIEKIVNTSE 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ Y DI+G GG+++ IE+ R+ +DI +F WGI Sbjct: 177 VPVIVKEVGFGMSQKTVKKLHDVGVEYVDISGYGGSNFFEIENLREPNADISDLFS-WGI 235 Query: 244 PTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 PT LSL E + ++ IASGG++ VDI+KS+ LGA + ++ L + + Sbjct: 236 PTALSLIETKKLDYDDMHLIASGGIKTSVDIVKSLCLGADMTAISGEILSYIVRGGYEYT 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ L ++ + M L G K + EL Sbjct: 296 LRYIDGLMEKTKMLMMLNGAKNISEL 321 >gi|323701117|ref|ZP_08112792.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfotomaculum nigrificans DSM 574] gi|323533719|gb|EGB23583.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfotomaculum nigrificans DSM 574] Length = 352 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 124/335 (37%), Positives = 190/335 (56%), Gaps = 17/335 (5%) Query: 4 DRKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK++HI + K+ + FDD L+H +LP+++ +VD S FLGK L PLLI Sbjct: 4 NRKLEHIELSLRQKESAVSTG---FDDITLVHNSLPQLNLADVDTSCTFLGKVLQGPLLI 60 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ ++ E IN +LA AA VAMAVGSQR DH SF + R P V++ Sbjct: 61 NAMTGGHPEL-ESINFSLAKAAYTVGVAMAVGSQRAALEDHAVRSSFSVVRDANPDGVIL 119 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D + +A +A+ ++ ADGL LHLN QE+ G+ +F + I LL+ Sbjct: 120 ANLGA-----DCTLNEAREAIKMIKADGLQLHLNVPQELAMAEGDRDFRGILQNIELLTK 174 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P+++KEVG G+S I +G Y D+ G GGT + IE++R Sbjct: 175 QLTTPVVVKEVGFGMSRETISRLRAAGAAYIDVGGAGGTDFIAIENNRSGRQ----TRWA 230 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WGIPT +SL + IASGG+ + +D +K++ LG S+ G+A P LK +D S++ Sbjct: 231 WGIPTAISLLEGLAVESPGHLIASGGIVHALDCVKALCLGCSMVGMARPLLKILIDGSTE 290 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + A +++L + M +LG +R+ +L A+I Sbjct: 291 ELTAYLQNLIADIRRIMLMLGARRIADLTSVPAVI 325 >gi|193214122|ref|YP_001995321.1| isopentenyl pyrophosphate isomerase [Chloroherpeton thalassium ATCC 35110] gi|193087599|gb|ACF12874.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroherpeton thalassium ATCC 35110] Length = 381 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 122/358 (34%), Positives = 187/358 (52%), Gaps = 27/358 (7%) Query: 4 DRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H+ I P ID K FD + H A PE++F E+D S FLG+K+S+PL+I Sbjct: 17 ERKQSHVEICLNGP-IDYENKTNGFDHYFFEHTATPEVNFSEIDLSTTFLGRKISYPLMI 75 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SSMTGG + + +N+ LA + + + VGS R D + +SFE+ R+ A + + Sbjct: 76 SSMTGGYSGAM-FVNQMLAEICQHLNIPLGVGSMRQALEDKSYQQSFEIVRKVAQNVQIF 134 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA ++ + +++ ADGL +H+NP QE+ QP GNTNF S++ L Sbjct: 135 ANIGAPEVAQGLSRDQLKFLTNLIKADGLIIHINPAQELFQPEGNTNFKGFLSQLKALID 194 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI---- 236 A+ +P++ KEVG G+S + +G+ D+AG GGTSW ++E R E GI Sbjct: 195 AVQIPVIAKEVGAGISGKVAARLIDAGVTAIDVAGAGGTSWQKVEKVR-YERKYGIDKRF 253 Query: 237 ------VFQDWGIPTP------LSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASL 283 +WGIPT L+ + P N + I+SGG+ NGV+I KS+ LGA + Sbjct: 254 SATAMNELLNWGIPTAECLVQITKLKASEPEKYNNIELISSGGISNGVEIAKSLALGAQI 313 Query: 284 GGLASPFLKPAM----DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A P LK + S D + I + + +MFL G + +L + R + Sbjct: 314 AASARPILKQLLAREDSSQDNLERTIMTWMNDLRATMFLAGVSSIAQLRQTKLICRQR 371 >gi|149918165|ref|ZP_01906657.1| isopentenyl-diphosphate delta-isomerase, type 2 [Plesiocystis pacifica SIR-1] gi|149820925|gb|EDM80332.1| isopentenyl-diphosphate delta-isomerase, type 2 [Plesiocystis pacifica SIR-1] Length = 355 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 107/279 (38%), Positives = 160/279 (57%), Gaps = 7/279 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+ + D G + L+H ALPE+ DEVD VE LGK L P++ Sbjct: 10 ISQRKKDHLALCAGDNVGFREKSTLLEQVELVHDALPEMHADEVDSRVELLGKTLQAPVV 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS+MTGG ++ +IN++LA AE+ +A+ +GSQR MF + +F++R+ AP +L Sbjct: 70 ISAMTGGTDEA-AKINQDLAQVAEELGLAIGLGSQRAMFERPHTAWTFQVRERAPKVLLF 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQ + Q +GAD L +HLNP EI+QP G+ +F+ L + Sbjct: 129 GNLGLVQARV-MTTDQIRQLCADVGADALCIHLNPAMEIVQPGGDRDFSGGLDVFRRLVA 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVF 238 + +P++ KE GCG+S + L +G+ +FD++G GGTSW +E+HR D + + Sbjct: 188 ELGIPVIAKETGCGISRTVAKKILDTGVTHFDVSGSGGTSWVAVEAHRAADDQKALAEEL 247 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 DWGIPT SL A+ IA+GGLR G D+ +S+ Sbjct: 248 WDWGIPTAASLLQLEGLG--AKVIATGGLRRGSDVARSV 284 >gi|304438858|ref|ZP_07398782.1| isopentenyl-diphosphate delta-isomerase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372659|gb|EFM26241.1| isopentenyl-diphosphate delta-isomerase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 342 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/313 (36%), Positives = 189/313 (60%), Gaps = 10/313 (3%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 FDD L+H +LPE F EVD S FL KK++FPL+I++MTGG++ E INR+L+ A+ Sbjct: 23 LFDDVMLMHNSLPECDFYEVDTSTMFLNKKINFPLMINAMTGGSD-FTEDINRDLSKIAK 81 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + + MAVGSQ + D +AIKSF++ R +++ NL + +A AV + Sbjct: 82 EFNLPMAVGSQTIALEDKDAIKSFKIVRDNMKDGIVLGNLSGRAT-----IDEAKFAVEM 136 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GADGL +HLNP QE+ G+ F + + I + S++DVP+++KEVG G+S ++ Sbjct: 137 IGADGLQIHLNPAQELAMEEGDRTFRGILTNIEKIVSSLDVPVIVKEVGFGMSKDVVKKL 196 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-CNEAQFI 262 G+R D++G GGT++ +E+ R+ E+D+ ++ WGIPT +S+ A+ ++ Q I Sbjct: 197 YDIGVRIVDVSGYGGTNFMEVENLRNPENDLSELYS-WGIPTAMSVIGAKSLGLDDLQII 255 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 +SGG++N +D++KSI++GA + ++ L + + + + L + + M L G Sbjct: 256 SSGGVKNSLDVVKSIVIGADMVAISGEILSYLVHGGYEYTMQYLAGLIYKTKIVMTLTGA 315 Query: 322 KRVQELYLNTALI 334 K ++EL + LI Sbjct: 316 KNIEELKESKYLI 328 >gi|148359625|ref|YP_001250832.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila str. Corby] gi|166226199|sp|A5IDN6|IDI2_LEGPC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148281398|gb|ABQ55486.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila str. Corby] Length = 342 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 121/330 (36%), Positives = 171/330 (51%), Gaps = 11/330 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ L KK+ P +ISSM Sbjct: 11 RKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRLKKKVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE---LRQYAPHTVLIS 121 T G++ +E IN L A KTK AM VGSQR +D A +FE LR+ P L S Sbjct: 71 TAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQA--AFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIVHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S+ A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSIRNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDL 336 >gi|71483054|gb|AAZ32487.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [uncultured euryarchaeote Alv-FOS4] Length = 337 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/326 (34%), Positives = 184/326 (56%), Gaps = 8/326 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + DRK++HI + C D ++ + ++DD L H +P + +++D VEFLG+KL +P+++ Sbjct: 5 IKDRKLEHIKL-CLDKNVNASYNYWDDVILKHVTIPRVDLEDIDLRVEFLGRKLEYPIIV 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + + + IN N+A AAE+ + MAVGSQR +++ + + + + Sbjct: 64 DAMTGG-HPVAKSINENIAKAAEELGIGMAVGSQRSAIVAPELEETYGVIRNYDVPLRLG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q +G + +A+ ++ A L +H N LQE +QP G+ + L S+++ L A Sbjct: 123 NLGAPQFALGYGESEIEKAMEMVDAHALEIHFNYLQEAVQPEGDRVVSGLLSRLSPL--A 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PL+ KE G G + G R D++G GTS++ +E +R ++G +F DW Sbjct: 181 RKYPLVAKETGAGFDLHSAKTLADMGFRAIDVSGVSGTSFAAVEYYRG--GELGRIFWDW 238 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+P+P L R I SGGLRNG+D +++ LGA++ G A L A S++AV Sbjct: 239 GLPSPYCLIELREL--NVPLIGSGGLRNGLDAARALALGATVAGFARAILPHATKSAEAV 296 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 IE + +E V+MFL G V ++ Sbjct: 297 QKKIEEIVQEMRVAMFLSGATSVGDM 322 >gi|329897192|ref|ZP_08271932.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [gamma proteobacterium IMCC3088] gi|328921347|gb|EGG28741.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [gamma proteobacterium IMCC3088] Length = 347 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 184/332 (55%), Gaps = 7/332 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +NDRK +H+ + D ALPE++F E+D GK+L PL+I Sbjct: 6 INDRKSEHLTLAGLPTMQMSVTNGLDSVQFEPCALPELNFSEIDTRCHLFGKELQQPLII 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +SM+GG + ++N+ LA AAE+ VA+ +GS R+ +F++R AP +++ Sbjct: 66 ASMSGGT-RASRQLNQTLAAAAEQAGVALGLGSMRIAIEQPEQCSTFQVRSIAPSIPILA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G QL G+ A + + + ADG+F+HLNPLQE +Q G+T + + IA L + Sbjct: 125 NIGGAQLVQPEGLSHALKCIDIAEADGIFVHLNPLQEALQSQGDTQWRGVLDAIATLVTL 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 VP+++KEVG GL + G++Y DIAG GGTSW+ IE+ R D ++ G VF Sbjct: 185 APVPVIVKEVGHGLGPSTARKLVNVGVQYLDIAGAGGTSWAAIETERSRTDNKAQTGEVF 244 Query: 239 QDWGI---PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 ++GI + S++ IASGG+R+G+DI KSI LGAS ASP L A Sbjct: 245 HNFGINLRDSLRSIQQEETLSESLTLIASGGIRSGLDIAKSIRLGASFASAASPILAAAN 304 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++++ +E R++ +S F+ G +++L Sbjct: 305 HGTESLTEFLEQWRQQLRISCFVTGCASLRDL 336 >gi|194333228|ref|YP_002015088.1| isopentenyl pyrophosphate isomerase [Prosthecochloris aestuarii DSM 271] gi|194311046|gb|ACF45441.1| isopentenyl-diphosphate delta-isomerase, type 2 [Prosthecochloris aestuarii DSM 271] Length = 357 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/354 (33%), Positives = 190/354 (53%), Gaps = 22/354 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKF-FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ I D K F+ L H A+PEI+F E+D + FLG ++++P Sbjct: 7 LTAERKHHHVEICLHDDVRFSGKTTGFEHIELEHNAVPEINFSEIDLATTFLGHRINYPF 66 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG K + +NR++A +EK K+ + VGS R + N +SF + RQ AP Sbjct: 67 MISSMTGGYTKAAD-LNRSIAETSEKLKIPLGVGSMRQALENDNFRQSFSIVRQAAPSIP 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+GA ++ Q + ++ AD L +HLNP QE+ QP GNT+F+ + + + Sbjct: 126 VLANIGAPEIAGGVSKQDILSLIDMVAADALIVHLNPAQELFQPEGNTDFSHFLNNLEEI 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------- 231 SA+ +P++ KEVGCG+S+ + + +G D+AG GG SW ++E R L Sbjct: 186 GSALPIPIIAKEVGCGISAETAKKLIDAGAAVIDVAGAGGLSWQKVEEVRYLRQFGEDRR 245 Query: 232 ---SDIGIVFQDWGIPTPLSL----EMAR--PYCNEAQFIASGGLRNGVDILKSIILGAS 282 S + + +WGIPT L M R P + IASGG+ NG+DI K+I LGA Sbjct: 246 FSPSALDTLL-NWGIPTSRCLADIAAMKRREPRYEPIEIIASGGIANGIDIAKAIALGAD 304 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + A LK + + I + + +MFL G++ +++L +I H Sbjct: 305 IAASAGMMLKAL--HHNILEQTILTWMNDLKAAMFLTGSRTIRDLQQTRTIIHH 356 >gi|193213416|ref|YP_001999369.1| isopentenyl pyrophosphate isomerase [Chlorobaculum parvum NCIB 8327] gi|226707317|sp|B3QQG6|IDI2_CHLP8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|193086893|gb|ACF12169.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobaculum parvum NCIB 8327] Length = 357 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 20/344 (5%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+++ P D D W H A PEI F E+D + EFLG + PL Sbjct: 8 ITAERKHSHVDVCLNRPVCFDGQDTGLDAWRFEHNAAPEIDFAEIDLTAEFLGHAIGMPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG + +NR LA AAE+ ++ + VGS R ++ +SF + R AP Sbjct: 68 MISSMTGGYGDALA-LNRTLAEAAERFRIPLGVGSMRQALEGNSHRESFSIVRSSAPSVP 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ ++ V ++ ADGL +HLNP QE+ QP G+TNF ++ + Sbjct: 127 IFANIGAPEVAAGLSREQLSTLVELIEADGLIVHLNPAQELFQPEGSTNFRGFLDRLHDI 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------- 231 ++ ++VP++ KEVGCG+S+ +G++ D+AG GG SW ++E R L+ Sbjct: 187 TATINVPVIAKEVGCGISAPLASKLADAGVKAIDVAGAGGISWQKVEECRYLDRFGNEER 246 Query: 232 -SDIGI-VFQDWGIPTP------LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S + F +WGIPT +L+ P I+SGG+RNG+D+ KSI LGA + Sbjct: 247 FSPSALDEFLNWGIPTAECLTGIAALKEKSPEYGSLAVISSGGIRNGLDVAKSIALGADI 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A LK + + I + + +MFL G+ +L Sbjct: 307 AASAQHLLKAL--RAGTLEETIRTWANDLRAAMFLTGSATTAQL 348 >gi|54294950|ref|YP_127365.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila str. Lens] gi|81822355|sp|Q5WUY8|IDI2_LEGPL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|53754782|emb|CAH16269.1| hypothetical protein lpl2029 [Legionella pneumophila str. Lens] Length = 342 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/322 (36%), Positives = 165/322 (51%), Gaps = 7/322 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ K + P +ISSM Sbjct: 11 RKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFNKPVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 T G++ IE IN L A KTK AM VGSQR +D A +E LR+ P L SNL Sbjct: 71 TAGHSNAIE-INYRLMEACSKTKWAMGVGSQRRELTDKQAAFEWEPLRRDFPMVSLFSNL 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL D + + + L A+ L +H NPLQE IQP G TNF + + L ++ Sbjct: 130 GIAQL-IDTPISAIQRLIDTLHAEALIIHCNPLQECIQPEGTTNFHGCWAALEALVKKIN 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIVFQ 239 P+++KE GCG S + G+ D++G GGT W RIE HR + I F+ Sbjct: 189 SPVIVKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRADKDPIRHRTADTFR 248 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 +WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS+D Sbjct: 249 NWGIDTLQSTHNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDSTD 308 Query: 300 AVVAAIESLRKEFIVSMFLLGT 321 V+ + ++ E +MF G+ Sbjct: 309 QVLTQMNTIEYELKTAMFCTGS 330 >gi|304321789|ref|YP_003855432.1| isopentenyl pyrophosphate isomerase [Parvularcula bermudensis HTCC2503] gi|303300691|gb|ADM10290.1| isopentenyl pyrophosphate isomerase [Parvularcula bermudensis HTCC2503] Length = 343 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 124/326 (38%), Positives = 183/326 (56%), Gaps = 5/326 (1%) Query: 5 RKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH+ +V +D G + + ALPEI + VD S LG L+ PL+I+S Sbjct: 11 RKRDHLAVVLERDVGFGGLTTGLEKIRFMPNALPEIDYRAVDLSTTLLGIPLAAPLIINS 70 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISN 122 MTGG K IN +L AA +AMAVGSQRV D S LR+ AP+ L +N Sbjct: 71 MTGGPEKA-ATINLHLTEAAAHLGIAMAVGSQRVALEDKGQSGFSPALRRAAPNIPLFAN 129 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA Q+ GV +A A+ ++ ADGLF+HLNP+QE IQ G+T++ + S + L SA Sbjct: 130 LGAAQIRGPKGVDRARAALDMIAADGLFIHLNPVQEAIQNGGDTDWTGVISGLERLVSA- 188 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-SDIGIVFQDW 241 +P+ +KEVG GLS + ++ G+R D+AG GGT+W+R+E R+ + +F +W Sbjct: 189 GIPIAVKEVGFGLSPNVVRRLVEIGVRIIDVAGAGGTNWARVEGFREGHLAQRAALFTEW 248 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+PT ++ AR I SGG++ D+ ++ LGA L G A+ L A++S++AV Sbjct: 249 GLPTASAIRHARAIAPSTMLIGSGGIKTAHDVAAALRLGADLVGQAAASLSAALESTEAV 308 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 VA + + + F G+ + L Sbjct: 309 VAHFQEIIEGLRTICFATGSADIASL 334 >gi|21673096|ref|NP_661161.1| isopentenyl pyrophosphate isomerase [Chlorobium tepidum TLS] gi|32129637|sp|Q8KFR5|IDI2_CHLTE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|21646168|gb|AAM71503.1| isopentenyl-diphosphate delta-isomerase, putative [Chlorobium tepidum TLS] Length = 357 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 115/344 (33%), Positives = 181/344 (52%), Gaps = 20/344 (5%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H++I P D D W H A PE+ F ++D S EFLG + PL Sbjct: 8 ITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG + +NR L AAE+ ++ + VGS R + +SF + R AP Sbjct: 68 MISSMTGGYGNALA-LNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVP 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + + ++ A+GL +HLNP QE+ QP G T+F+ ++ + Sbjct: 127 IFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVHLNPAQELFQPEGGTDFSGFLDRLHDI 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------- 231 ++ + VP++ KEVGCG+S+ +G+R D+AG GG SW ++E R L+ Sbjct: 187 TATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDRFGHEER 246 Query: 232 -SDIGI-VFQDWGIPTP------LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S + F +WGIPT +L+ P + I+SGG+RNG+DI KSI LGA++ Sbjct: 247 FSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANI 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A LK S + I + + +MFL G+ +++L Sbjct: 307 AASAQHLLKAL--HSGTLEETIRTWANDLRAAMFLTGSATIEQL 348 >gi|78189406|ref|YP_379744.1| isopentenyl pyrophosphate isomerase [Chlorobium chlorochromatii CaD3] gi|91207070|sp|Q3AQM4|IDI2_CHLCH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78171605|gb|ABB28701.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium chlorochromatii CaD3] Length = 357 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 188/348 (54%), Gaps = 22/348 (6%) Query: 4 DRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H+ + C + + K F+ ++ H ALPEI+F E+D S FLG+ + PL++ Sbjct: 12 ERKQSHVEL-CLHANVAFSGKTTGFERFYFEHNALPEIAFAEIDCSTTFLGRHIGAPLMV 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SSMTGG ++ +NR LA AAE ++ + VGS R +SF + R+YAP T+L Sbjct: 71 SSMTGGYSEA-STLNRQLAEAAEHFQIPLGVGSMRQTLESPLHRESFAVTRKYAPTTLLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA ++ + +L ADGL +HLN QE+ QP GNTNF + +I L + Sbjct: 130 ANIGAPEVAQGLSQSDVAMMLDLLRADGLIVHLNAAQELFQPEGNTNFHRVLEEIHNLCA 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE--------- 231 +VP+++KEVG G+ + E +++G++ D+AG GG SW ++E +R L+ Sbjct: 190 TTNVPIIVKEVGNGIGAAVAEQLMEAGVQALDVAGAGGISWQKVEEYRFLQQFGHEHRFS 249 Query: 232 SDIGIVFQDWGIPTPLSL----EMAR--PYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S+ +WGIPT L E+ R P + + IASGG+ +G+D+ KS+ +GA L Sbjct: 250 SNALDELLNWGIPTTNCLLDIAELKRLQPQFQQIEIIASGGVSSGMDVAKSLAMGAQLAA 309 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A L + + A IE + +MFL G V L + L Sbjct: 310 SARHLLHAL--HAGTLTATIEQWLNDLKAAMFLTGAATVDALRTKSLL 355 >gi|195941503|ref|ZP_03086885.1| isopentenyl pyrophosphate isomerase [Borrelia burgdorferi 80a] Length = 354 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 117/325 (36%), Positives = 175/325 (53%), Gaps = 4/325 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F IK F L++YA L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHDIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSIFTL-LSVDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +SMFL G+K + EL Sbjct: 306 GLFSDYEHILKMSMFLSGSKSLSEL 330 >gi|119094152|gb|ABL60982.1| isopentenyl-diphosphate delta-isomerase Idi [uncultured marine bacterium HF10_19P19] Length = 339 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 14/333 (4%) Query: 1 MVNDRKIDHINIV-CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + DRK H+++ P D D L + ALPE + V + EFLG +L PL Sbjct: 8 LTTDRKNAHLDLAKTSQPLADHP---LDAVSLPYCALPECDLNRVSLTTEFLGIELDSPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 +I+ MTGG ++ + INR LA A+K KVA+ +GSQR + ELR+ AP VL Sbjct: 65 IITGMTGGTDRAMA-INRVLADTAQKKKVALGLGSQRASLESGQS--QAELRRLAPDAVL 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I NLG QL G++ A AV + AD L +HLNPLQE IQP G+ ++ + S I Sbjct: 122 IGNLGGAQLAGKDGLKLARAAVEDIRADALAIHLNPLQEAIQPEGDHDWRGVLSAIETAV 181 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG--IV 237 ++ P+L+KEVG GLS + G+R+ D+A RGGT+W++IE +R E+D Sbjct: 182 GTLNCPVLVKEVGAGLSGNVVRRLAAIGVRHVDVAARGGTNWAQIELNRRPETDRAHYAP 241 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F G+ P ++ AR N IASGG+R+G+D K + LGA L G+A L+ D+ Sbjct: 242 FLSCGLMLPDAIAQARAVSNHLCIIASGGVRHGLDAAKCLWLGADLVGMAGHILRTVEDN 301 Query: 298 S-----DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + + + +++++ +S+FL G ++ Sbjct: 302 AGHLHPKQLSDLLYTVQQQLRLSLFLAGKSSIK 334 >gi|78187618|ref|YP_375661.1| isopentenyl pyrophosphate isomerase [Chlorobium luteolum DSM 273] gi|91207075|sp|Q3B213|IDI2_PELLD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78167520|gb|ABB24618.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium luteolum DSM 273] Length = 361 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 121/344 (35%), Positives = 185/344 (53%), Gaps = 20/344 (5%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H++I D F+ + L H ALPE+SF ++ FLG+++ PL+IS Sbjct: 11 ERKHSHVDICLNGDVAFSTPTTGFERYRLRHNALPEVSFADITTESRFLGRRIGAPLMIS 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG ++ E +NR LA AE+ ++ + VGS R D SF + R++AP + + Sbjct: 71 SMTGGYSEAAE-LNRQLAETAERFQLPLGVGSMRQALEDDAYRDSFSVVRRHAPTIQIFA 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ + H + ++ ADGL +HLN QE+ QP G T+F + IA +++ Sbjct: 130 NIGAPEVAKGLSDKDLHIMLEMIRADGLIIHLNAAQELFQPEGGTDFRRVLDNIADIAAK 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE--------SD 233 + VP++ KEVGCG+S L++G++ D+AG GG SW ++E R S Sbjct: 190 LPVPVIAKEVGCGISGAVARKLLEAGVQVIDVAGAGGISWQKVEEARYTRRFGSDTRFSQ 249 Query: 234 IGI-VFQDWGIPTP---LSLEMARPYCNEAQ---FIASGGLRNGVDILKSIILGASLGGL 286 GI +WGIPT + ++ RP + IASGG+ +G+DI KSI LGA L Sbjct: 250 EGIEELLNWGIPTAACVVEVDALRPRTAGGRPFSIIASGGIHSGLDIAKSIALGADLAAS 309 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A L+ + + A I + ++ SMFL G+ V EL N Sbjct: 310 AGALLRALHHGT--LEATITAWLQDLRASMFLTGSANVAELQNN 351 >gi|108798922|ref|YP_639119.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. MCS] gi|119868037|ref|YP_937989.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. KMS] gi|126434522|ref|YP_001070213.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. JLS] gi|108769341|gb|ABG08063.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Mycobacterium sp. MCS] gi|119694126|gb|ABL91199.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. KMS] gi|126234322|gb|ABN97722.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. JLS] Length = 348 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/317 (35%), Positives = 171/317 (53%), Gaps = 3/317 (0%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK HI++ P + + L + AL + S V FLGK LS P+LI + Sbjct: 19 RKRRHIDVCLGGPVEYQTVTTGLERYRLPYNALTQTSLSRVRLDTRFLGKPLSAPVLIGA 78 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG ++ INRNLA AA++ V M +GSQR+MF + SF +R AP +LI N+ Sbjct: 79 MTGGA-ELSGVINRNLAAAAQRLGVGMMLGSQRIMFDNDAVASSFAVRDIAPDVLLIGNV 137 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL+ + +A+ +GAD L +H NPLQE +Q +G+T+F ++ L++ + Sbjct: 138 GLAQLSEPV-MPALERALERVGADALAVHTNPLQEAMQRDGDTDFTGSIDRLRTLAATLR 196 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P++LKEVG G+ + S + D+AG GGTSW+R+E +WGI Sbjct: 197 QPVMLKEVGHGIGAAAAAELAGSALAAVDVAGAGGTSWARVEQLVRYGEIRSPALAEWGI 256 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 PT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S+DAVV Sbjct: 257 PTAQALLEVRGTLPDVAVVASGGIRTGMDAAKALAMGADVVAVARPLLAPAIESADAVVE 316 Query: 304 AIESLRKEFIVSMFLLG 320 + E V + G Sbjct: 317 WLRGFIDELRVCLHGCG 333 >gi|216264200|ref|ZP_03436192.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 156a] gi|215980673|gb|EEC21480.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 156a] Length = 354 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 177/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGSCNFLKFVKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F IK F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSIFTL-LSVDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 GLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|296107667|ref|YP_003619368.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila 2300/99 Alcoy] gi|295649569|gb|ADG25416.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila 2300/99 Alcoy] Length = 342 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 120/330 (36%), Positives = 168/330 (50%), Gaps = 11/330 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ K + P +ISSM Sbjct: 11 RKRDHIELALMPANQSNELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE---LRQYAPHTVLIS 121 T G++ +E IN L A KTK AM VGSQR SD A +FE LR+ P L S Sbjct: 71 TAGHSNALE-INSRLMEACSKTKWAMGVGSQRRELSDKQA--AFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEVWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDL 336 >gi|150399803|ref|YP_001323570.1| isopentenyl pyrophosphate isomerase [Methanococcus vannielii SB] gi|150012506|gb|ABR54958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus vannielii SB] Length = 356 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/333 (34%), Positives = 186/333 (55%), Gaps = 14/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++H+ IVC ++ K +D LIH + + +D S+E GKKL P++I++ Sbjct: 9 RKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGVSNCDLNNIDTSIEIFGKKLDAPIIIAA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K + +N+N+A+A E+ + M VGSQR + I ++ + + +++I NL Sbjct: 68 ITGGHPKA-KDVNKNIAVAIEELNLGMGVGSQRAGILKPDLIDTYSIVRDYTSSLVIGNL 126 Query: 124 GAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 GAV D + + ++V ++ A+ + +H NPLQE IQP G+ NF L ++S Sbjct: 127 GAVNFIEDGWNEEIISKSVEMIDANAIAIHFNPLQEAIQPEGDVNFKGLGLLKEIISKYK 186 Query: 183 DV----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 ++ P + K+VG G S D K G D+ G GGTSW+ +E +R + + + Sbjct: 187 NIYKNIPFVAKQVGEGFSKKDAIFLKKMGFDAIDVGGSGGTSWAAVELYRIKDEKQREFL 246 Query: 236 IVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++GIPT S+ E+ + N IA+GG+R G+DI KSI +GA G A P LK A Sbjct: 247 NQYYNFGIPTAASIFEVKSGFSN--PIIATGGIRTGIDIAKSIAIGADCCGTALPILKAA 304 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SSD V+ +E + KE +MFL G + +L Sbjct: 305 LKSSDEVINVLERMIKELKTTMFLTGCGSITDL 337 >gi|312149599|gb|ADQ29670.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi N40] Length = 354 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 175/325 (53%), Gaps = 4/325 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + + F L H AL + +F E+ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSIFTL-LSVDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +SMFL G+K + EL Sbjct: 306 NLFSDYEHVLKMSMFLSGSKSLSEL 330 >gi|163790897|ref|ZP_02185321.1| isopentenyl pyrophosphate isomerase [Carnobacterium sp. AT7] gi|159873850|gb|EDP67930.1| isopentenyl pyrophosphate isomerase [Carnobacterium sp. AT7] Length = 355 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/328 (33%), Positives = 193/328 (58%), Gaps = 10/328 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +N+RK +H+++ K +R K FD + +H + PE+ + S F ++FP I Sbjct: 4 MNNRKNEHVSLAEKFAKENR-KSDFDSFRFVHHSFPEMKVSDATLSTSFATLDMAFPFYI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +++TGG+ +++N LA+ A +T +AMA GS D SF + R+ P + Sbjct: 63 NAITGGS-PWTKKVNEKLALIARETGIAMATGSISAALKDPTVKDSFTIVREINPTGKVF 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG Q ++ A +AV ++ AD L +H+N QEI+ P G+ +F++ +++ + Sbjct: 122 ANLGTGQT-----LENAKKAVELVQADALQIHVNSPQEIVMPEGDRDFSNWLTELEKIVH 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KEVG G+S I+ G++ DI+G+GGT++++IE++R +SD + Sbjct: 177 HVSVPVIVKEVGFGMSRETIQQLTSIGVQTIDISGQGGTNFAQIENYRR-DSDKYDYLEG 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG T +SL A+PY N+ + +ASGG+RN +DI+KS+ LGA G++ FL A+ D + Sbjct: 236 WGQSTVISLVEAQPYVNQVEILASGGIRNPLDIIKSLSLGARAVGISGLFLHMALRDGVE 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + IE+ +K+ + M LLG K +++L Sbjct: 296 TTILEIEAWKKQLVSIMTLLGKKSIKDL 323 >gi|310823056|ref|YP_003955414.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] gi|309396128|gb|ADO73587.1| Isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] Length = 352 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 180/332 (54%), Gaps = 15/332 (4%) Query: 5 RKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK H+++ D +N + L+H A+PE+ ++D S FLGK+L PLLI+ Sbjct: 9 RKDAHLDLCATGDVEPQQNSTLLECVRLVHCAMPELDAGDLDLSTRFLGKRLHCPLLITG 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + R+N++LA AE+ +A VGSQR M SF++R AP L+ N+ Sbjct: 69 MTGGTERA-GRVNKDLATLAERYGLAFGVGSQRAMSEAPERAASFQVRDVAPSVALLGNI 127 Query: 124 G---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 G A +L D GV++ +A+ ADG+ LHLN QE+ QP G+ +F + + L Sbjct: 128 GLYQAARLGVD-GVRRLMEAIE---ADGMALHLNAGQELTQPEGDRDFRGGYAVVEGLVK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR--DLESDIGIV 237 A LL+KE GCG+ ++ LK G+ D++G GGTSW R+E R L +++G Sbjct: 184 AFGSRLLVKETGCGIGP-EVARRLKELGVSNIDVSGLGGTSWVRVEQLRAKGLLAELGAE 242 Query: 238 FQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT ++ R E + +ASGG+R G+D+ K + LGA + G+A P K + Sbjct: 243 FSGWGIPTAAAVASVRQAVGPEVRLVASGGIRTGLDVAKVLALGADVAGMALPLFKAQQE 302 Query: 297 SS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A++ + +M L G++ EL Sbjct: 303 GGLEGAEKALQLILAGLRQAMLLTGSRGCAEL 334 >gi|225551735|ref|ZP_03772678.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia sp. SV1] gi|225371530|gb|EEH00957.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia sp. SV1] Length = 354 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 176/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKSGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANDLKIPMGLGSFKLLFKYPEYIRDFALKRYAHNIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 AVQ+ +FG+ K + + L D + +HLN QE++ NG+ NF + IA LS + Sbjct: 128 SAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGVSYVDLAGSGGTNWILVEGMKSHNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ +S DAV Sbjct: 247 PSIFTL-LSVDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYNSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + EL N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKSLSELRNNKYFL 337 >gi|227500799|ref|ZP_03930848.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus tetradius ATCC 35098] gi|227217104|gb|EEI82462.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus tetradius ATCC 35098] Length = 336 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 112/324 (34%), Positives = 179/324 (55%), Gaps = 11/324 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K + DD ++ H AL +S DE+D S+EFLGKK++ PL++++M Sbjct: 7 RKDEHIENYLKSESL--TNSLLDDIYIEHNALGNLSLDEIDTSIEFLGKKITMPLMVNAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN +L+ E + MAVGS+ + D + +F L + + I NLG Sbjct: 65 TGGGEAGCD-INEDLSSICESVGIPMAVGSEAIAIDDEESRDAFTLMK-DKELIKIGNLG 122 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + + DF A ++ A+ + +HLN QE++ P G+ +F L I L D+ Sbjct: 123 SERSLEDFIF-----ARDLIKANAMQVHLNIAQELVMPEGDRDFRKLDENIKNLVENFDL 177 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++KE G G+S + + G++Y D+AG+GGT++ IE RD+E+D ++ DWGIP Sbjct: 178 PIIVKETGSGISKKVAQKLMTMGVKYIDVAGKGGTNFIEIEDLRDVETDFSEIY-DWGIP 236 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 T S+ R IASGGLRN +DI+KSII+GA + ++ L+ + +A Sbjct: 237 TAKSIIDVRSVSKNVFIIASGGLRNAMDIVKSIIIGADMAAMSGEVLRYLLHGGYEACED 296 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 + L + + M L+G K ++EL Sbjct: 297 FLRDLNYKIKIIMCLVGAKNIEEL 320 >gi|216263523|ref|ZP_03435518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia afzelii ACA-1] gi|215980367|gb|EEC21188.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia afzelii ACA-1] Length = 354 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 177/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI+I + F L H AL + +F E+D E G +S P+ ISS Sbjct: 9 ENKKRHIDICLNKNDVKSGCNFLRFVKLKHNALSDFNFSEIDIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG K N++L A K+ + +GS +++F I+ F L++YA L +N+ Sbjct: 69 MTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFALKRYAHSIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ + Sbjct: 128 GAVQI-VEFGISRIVEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSNFIS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ + G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPSDVKKLFQLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSIFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + + N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKSLSDFRNNKYFL 337 >gi|111115517|ref|YP_710135.1| isopentenyl pyrophosphate isomerase [Borrelia afzelii PKo] gi|122956330|sp|Q0SMG9|IDI2_BORAP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|110890791|gb|ABH01959.1| carotenoid biosynthesis protein, putative [Borrelia afzelii PKo] Length = 354 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 177/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI+I + F L H AL + +F E+D E G +S P+ ISS Sbjct: 9 ENKKRHIDICLNKNDVKSGCNFLRFVKLKHNALSDFNFSEIDIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG K N++L A K+ + +GS +++F I+ F L++YA L +N+ Sbjct: 69 MTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFALKRYAHSIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ + Sbjct: 128 GAVQI-VEFGISRIVEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSNFIS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ + G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPSDVKKLFQLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSIFTL-LSINDSLKANIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + + N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKSLSDFRNNKYFL 337 >gi|219685527|ref|ZP_03540344.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii Far04] gi|219672926|gb|EED29948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii Far04] Length = 359 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/332 (34%), Positives = 177/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + + F L H AL + +F E+ E G ++ P+ ISS Sbjct: 14 ENKKRHIEICLNENDVKGGCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNINMPVFISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG K N++L A K+ + +GS +++F I F L++YA L +N+ Sbjct: 74 MTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYITDFSLKRYAYDIPLFANI 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS + Sbjct: 133 GAVQI-VEFGISRIAEMIKRLEVDAIVIHLNAGQELMNVNGDRNFKGIKESIAKLSEFIS 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ K G+ Y D+AG GGT+W +E R + ++ F DWGI Sbjct: 192 VPLIVKETGFGISPNDVKELFKLGVSYVDLAGSGGTNWVLVEGVRSNDLNVASCFSDWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ + ASGG G+DI+K I LGA L G+A+ L+ +S DAV+ Sbjct: 252 PSIFTL-LSIDDSLKTNVFASGGYETGMDIVKGIALGAKLIGVAAVVLRAFYNSGEDAVI 310 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + EL N + Sbjct: 311 SLFSDYEHVLKMSMFLSGSKSLSELRKNKYFL 342 >gi|307610782|emb|CBX00395.1| hypothetical protein LPW_21151 [Legionella pneumophila 130b] Length = 322 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/307 (37%), Positives = 162/307 (52%), Gaps = 7/307 (2%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD + L+H ALP++ F ++ K + P +ISSMT G++ IE IN L A K Sbjct: 12 FDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSMTAGHSNAIE-INYRLMEACSK 70 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 TK AM VGSQR +D A +E LR+ P L SNLG QL D + + + L Sbjct: 71 TKWAMGVGSQRRELTDKQAAFEWEPLRRDFPMVSLFSNLGIAQL-IDTPISAIQRLIDTL 129 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H NPLQE IQP G TNF + + L ++ P+++KE GCG S + Sbjct: 130 HAEALIIHCNPLQECIQPEGTTNFHGCWAALEALVKKINSPVIVKETGCGFSKNTLLRLN 189 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIVFQDWGIPTPLSLEMARPYCNEAQ 260 G+ D++G GGT W RIE HR + I F++WGI T S A + Sbjct: 190 NIGVAAVDVSGVGGTHWGRIEGHRADKDPIRHRTADTFRNWGIDTLQSTRNAISLNPSFE 249 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 SGG+RNG+D K LGA+ G A P L+ A+DS+D V+ + ++ E +MF G Sbjct: 250 IWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDSTDQVLTQMNTIEYELKTAMFCTG 309 Query: 321 TKRVQEL 327 + + +L Sbjct: 310 SLVLDDL 316 >gi|239827520|ref|YP_002950144.1| isopentenyl pyrophosphate isomerase [Geobacillus sp. WCH70] gi|259491444|sp|C5D3G3|IDI2_GEOSW RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|239807813|gb|ACS24878.1| isopentenyl-diphosphate delta-isomerase, type 2 [Geobacillus sp. WCH70] Length = 349 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/333 (34%), Positives = 184/333 (55%), Gaps = 11/333 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKI+HI D+ FDD +H++LP++ +++ LS P I++M Sbjct: 6 RKIEHIQHALSTA--DQGASGFDDITFVHQSLPDVRMNDIHLHTALGELSLSSPFFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG K IN+ LA AA+ ++AMAVGSQ D+ +FE+ R+ + ++ +N+ Sbjct: 64 TGGGGKQTFEINKGLAEAAKHCRIAMAVGSQTSALRDNKQRGTFEIVRKVNKNGIIFANI 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V A +AV ++ ADGL +HLN +QE++ P G+ +F + +I + A+ Sbjct: 124 GS-----EATVDDAKRAVDMIEADGLQIHLNVVQELVMPEGDRDFTGVLLRIEQIVQAVQ 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + G++ D+ G GGT+++RIE+ R S+I F DWGI Sbjct: 179 VPVIVKEVGFGMSKETASRLEEVGVKIIDVGGLGGTNFARIENKR--RSNIITYFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT S+ I SGG+R +D K+I LGAS G+A P L+ ++ +A+V Sbjct: 237 PTAASIVEVAQTSPSLVVIGSGGVRTALDAAKAIALGASAVGMAGPLLRTLVEQGVEALV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+IE L + + M LG K + +L +IR Sbjct: 297 ASIEELHHDLTLIMGALGAKTIDKLQRVPLVIR 329 >gi|226320479|ref|ZP_03796045.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 29805] gi|226234121|gb|EEH32836.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 29805] Length = 359 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 173/325 (53%), Gaps = 4/325 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 14 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F IK F L++YA L +N+ Sbjct: 74 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHDIPLFANV 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 133 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDFLS 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 192 VPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ + ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 252 PSIFTL-LSVDDSLKTNIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 310 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +SMFL G+K + EL Sbjct: 311 NLFSDYEHVLKMSMFLSGSKSLSEL 335 >gi|160946595|ref|ZP_02093798.1| hypothetical protein PEPMIC_00553 [Parvimonas micra ATCC 33270] gi|158446979|gb|EDP23974.1| hypothetical protein PEPMIC_00553 [Parvimonas micra ATCC 33270] Length = 338 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 113/330 (34%), Positives = 184/330 (55%), Gaps = 12/330 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M N+RK +H+ K ++ F++ ++ H AL +++F E+D SV FLGKKLSFPL+ Sbjct: 1 MENERKKEHLENFLKSNF--KSNTLFENVYIEHFALTDLNFKEIDTSVNFLGKKLSFPLI 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTV 118 I++MTGG + +N +LA + +A VGSQ+V D +++F + + + Sbjct: 59 INAMTGGAETSYD-VNEDLARLCKNFNIAFEVGSQKVALQDEELVETFTVVKDILDKKNI 117 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +ISNL A+ + +AV +L +D + LHLNP QEI+Q G+ NF+ + I + Sbjct: 118 VISNLSALS-----SLDDVKRAVEMLNSDAISLHLNPAQEIVQFEGDRNFSGILENIENI 172 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +VP+++KE GCG+S E L G++Y DI+G GGT++ IE+ R + D ++ Sbjct: 173 VKNSNVPVIVKETGCGISKKTCEKLLNVGVKYIDISGFGGTNFIEIENLRRTDLDFTNIY 232 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT + R + I SGG++ G DI K+IILG+ + +A L+ + Sbjct: 233 -GWGIPTAKCIIDCRNISKDFTLIGSGGIKTGEDIAKAIILGSDMTAIAGEVLRYLVHGG 291 Query: 299 DAVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 ++SL + + M LLG + ++EL Sbjct: 292 YKFAEDYLKSLIYQTKMIMLLLGVRNIEEL 321 >gi|54297979|ref|YP_124348.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila str. Paris] gi|81822548|sp|Q5X3K0|IDI2_LEGPA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|53751764|emb|CAH13186.1| hypothetical protein lpp2034 [Legionella pneumophila str. Paris] Length = 342 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/330 (36%), Positives = 167/330 (50%), Gaps = 11/330 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ K + P +ISSM Sbjct: 11 RKRDHIELALMPANQSNELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE---LRQYAPHTVLIS 121 T G++ +E IN L A KTK AM VGSQR SD A +FE LR+ P L S Sbjct: 71 TAGHSNALE-INSRLMEACSKTKWAMGVGSQRRELSDKQA--AFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEVWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + + E +MF G++ + +L Sbjct: 307 TGQVLTQMNIIEYELKTAMFCTGSRVLDDL 336 >gi|67906788|gb|AAY82851.1| predicted IPP isomerase [uncultured bacterium MedeBAC46A06] Length = 351 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 121/325 (37%), Positives = 169/325 (52%), Gaps = 9/325 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + F+ L H ALPE + VD S LG+ +S PL + S Sbjct: 15 DRKDAHLALAADPLARSGVSAGFELVTLEHCALPECDLEAVDISTTCLGRMVSAPLFVGS 74 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN LA AE T + +AVGSQR + ELRQ AP LI NL Sbjct: 75 MTGGTAHA-DAINAALARTAEATGLPLAVGSQRASLESRRS--QAELRQMAPSVPLIGNL 131 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G VQL G+ A +A+ L AD +F+HLNPLQE QP G T + + I L ++ Sbjct: 132 GGVQLAAPGGLDLARRAIDDLAADAIFIHLNPLQEAAQPEGETGWRGVIDAIESLVGVVE 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP++ KEVG G+ G+ D+AG GGT+W+RIE R ++++ F DWGI Sbjct: 192 VPVMAKEVGAGIGPDVARRLFDVGVHAVDVAGLGGTNWTRIEVARREDAEMFEPFLDWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP------AMDS 297 PT +L R C + I SGG+ NG++ K++ LGASL +A P L+ Sbjct: 252 PTVTALRAVRAACPGGRIIGSGGIANGLEAAKALWLGASLVSMAGPVLRALTGDGRGKPD 311 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTK 322 ++A IE + + +++FL G + Sbjct: 312 AEAATKVIERWKSQLQLTLFLTGAE 336 >gi|51598939|ref|YP_073127.1| isopentenyl pyrophosphate isomerase [Borrelia garinii PBi] gi|81609816|sp|Q660I6|IDI2_BORGA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51573510|gb|AAU07535.1| carotenoid biosynthesis protein, putative [Borrelia garinii PBi] Length = 354 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E+ E G ++ P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNINMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG K N++L A K+ + +GS +++F I+ F L++YA L +N+ Sbjct: 69 MTGGG-KQGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYDIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ + + + L D + HLN QE++ NG+ NF + IA L+ + Sbjct: 128 GAVQI-VEFGISRIAEMIKRLEVDAIVTHLNAGQELMNVNGDRNFKGIKESIAKLADFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ LK G+ Y D+AG GGT+W +E R ++ F DWGI Sbjct: 187 VPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L + +A ASGG G+DI K I LGA L G+A+ L+ +S DAV+ Sbjct: 247 PSIFTL-LGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSGEDAVL 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + EL N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKSLSELRKNKYFL 337 >gi|254821726|ref|ZP_05226727.1| isopentenyl pyrophosphate isomerase [Mycobacterium intracellulare ATCC 13950] Length = 348 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 122/334 (36%), Positives = 176/334 (52%), Gaps = 10/334 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK HI++ +P G D +HL + AL + S ++D S F G L P+L Sbjct: 8 MKNRKRRHIDVCLSEPVGYAGVSTGLDRYHLPYNALTQTSLGDIDLSTTFFGANLRSPIL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG ++ INRNLA AA++ V M +GSQR+M A SF +R AP Sbjct: 68 IGAMTGGA-ELSGTINRNLAAAAQQLGVGMMLGSQRIMLDSALGERAADSFTVRDVAPDA 126 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+G QL V +A+ +GAD L +H NPLQE +Q NG+T+F+ ++ Sbjct: 127 LLFGNIGLSQL-AKAAVPDLAKALDRVGADALAVHTNPLQEAMQHNGDTDFSGSVDRLRE 185 Query: 178 LSSAMDVPLLLKEVGCGLSSMDI-ELGLKSG---IRYFDIAGRGGTSWSRIESHRDLESD 233 + A+ P+LLKEVG G+ + EL G + D+AG GGTSWSR+E Sbjct: 186 AADALGYPVLLKEVGHGIGGAAVAELLGADGTLPVAGIDVAGAGGTSWSRVEQFVRYGEL 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R E +ASGG+R G+D K+I LGA + +A P L Sbjct: 246 RHPELADWGIPTARAVVEVREALPEIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPA 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++S+ AVV ++ E V + G + L Sbjct: 306 AIESTAAVVDWLQPFIDELRVCLHGCGAANLAAL 339 >gi|323342437|ref|ZP_08082669.1| isopentenyl-diphosphate delta-isomerase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463549|gb|EFY08743.1| isopentenyl-diphosphate delta-isomerase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 331 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 183/328 (55%), Gaps = 11/328 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M + RK +H+ + + + + FD +IH++LP I+ +VD S++FLG+ + +P+ Sbjct: 1 MRSKRKDEHVTLALRQ---NVYQSDFDTIRIIHQSLPNINLSDVDASIQFLGQTMKYPIY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K E +NR LA A + MAVGSQ D + S+ + R P + Sbjct: 58 INAMTGGSEKT-EILNRKLARIARVFGLPMAVGSQHAALDDPSLASSYRVVRDENPSGFI 116 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+GA + V+ +A+ ++ A+ L +H+N QEI G+ +F+ I + Sbjct: 117 IGNVGA-----NATVEDVKRAIKMIDANALGIHINVAQEIAMDEGDRDFSHWIENITQIV 171 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +++DVP+++KEVG G+S + G+R+ D++GRGGT++ IE+ R Sbjct: 172 ASVDVPVIVKEVGFGMSDKTVAQLYACGVRHVDVSGRGGTNFVWIENERSQGKRYN-YLS 230 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGI T SL M + Y + ASGG++N +D +K +ILGA G++ FLK A SD Sbjct: 231 DWGITTVESLIMTKSYQEKCNIFASGGIQNPLDAMKCLILGAQAVGISGYFLKAAHLESD 290 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + ++F M L+G K ++EL Sbjct: 291 AMFEEVSMFLEDFKKLMVLVGAKTIKEL 318 >gi|224532402|ref|ZP_03673032.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi WI91-23] gi|224512709|gb|EEF83080.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi WI91-23] Length = 354 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 176/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 GLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 337 >gi|299143614|ref|ZP_07036694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518099|gb|EFI41838.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 340 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 193/327 (59%), Gaps = 14/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + F+D L H +LPE F+E+D S FL KK+ FPL+I++M Sbjct: 5 RKREHVENYLRSTYV--GNPLFEDVFLYHNSLPECDFNEIDTSTVFLNKKVDFPLIINAM 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ + E IN +LA A++ + MAVGSQ ++F D +A KSFE +R+ +++SNL Sbjct: 63 TGGS-EFAEGINLSLARVAKEFNIPMAVGSQTIVFEDKDARKSFECVRETLGDGIVLSNL 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 V +A A+ ++ ADG+ +HLNP QE+ G+ F + I+ + +D Sbjct: 122 SGHAT-----VDEAKYAIDMIKADGIQIHLNPAQELAMEEGDRGFKGIIKNISKIVEGVD 176 Query: 184 VPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S D+ + L +G+RY D++G GGT++ +E+ R +D+ ++ WG Sbjct: 177 VPVIVKEVGFGISK-DVAVKLYDAGVRYIDVSGFGGTNFFEVENLRVPSNDLSELY-GWG 234 Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 IPT +SL E+ + I+SGG++N ++++KSI+LGAS+ ++ L + + Sbjct: 235 IPTAMSLIEVNSLGYKDLNMISSGGIKNSLELVKSIVLGASMTAISGEILTYLIHGGYEY 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I ++ + V+M L G K + EL Sbjct: 295 TMQYISNIIYKSKVTMLLTGAKNISEL 321 >gi|312147969|gb|ADQ30628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi JD1] Length = 354 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 GLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|325478964|gb|EGC82066.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 337 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 185/325 (56%), Gaps = 11/325 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HI K + N +D ++ H+AL +I+ DE+D S+EFLG+K++ P+++++ Sbjct: 7 ERKDQHIENYLKSQSLTNN--LLEDIYIEHKALSDIAIDEIDTSIEFLGRKIAMPIMVNA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + IN +L+ E + MAVGS+ + D + +SF L + + + NL Sbjct: 65 MTGGGEAGAD-INEDLSSICESLNIPMAVGSEAIAIDDEESRESFTLLK-DKDLIKVGNL 122 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + DF A ++GAD + +HLN QE++ P G+ +F + I LS Sbjct: 123 GSERSIEDFTF-----AADLIGADIMQVHLNMAQELVMPEGDKDFRGIRDNIKNLSENFA 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+++KE G G+S + + G++Y D++G+GGT++ IE RD+++D ++ +WGI Sbjct: 178 TPIIVKETGAGISKEVAKDLIDLGVKYIDVSGKGGTNFIEIEDLRDMDTDFSELY-NWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVV 302 PT ++ R + IASGGLRN +D++KSII+GA + ++ LK + A Sbjct: 237 PTAKAIIDVRSISRDVFIIASGGLRNAMDVVKSIIIGADMAAVSGEVLKYLLHGGYMACE 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + ++ L + + M LLG K ++EL Sbjct: 297 SYLKDLNDKIKIIMCLLGVKNIEEL 321 >gi|240171561|ref|ZP_04750220.1| isopentenyl pyrophosphate isomerase [Mycobacterium kansasii ATCC 12478] Length = 348 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/331 (36%), Positives = 174/331 (52%), Gaps = 10/331 (3%) Query: 5 RKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK HI++ D + + L AL + S ++D SV+F G L P+LI + Sbjct: 11 RKRRHIDVCLNGDVNFAGVTTGLERYRLPFNALTQTSLHDIDMSVDFFGASLRAPILIGA 70 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS---DHNAIKSFELRQYAPHTVLI 120 MTGG ++ INRNLA AA++ + M +GSQR+M A SFE+R AP +LI Sbjct: 71 MTGGA-ELSATINRNLATAAQRLGLGMMLGSQRIMLDRSRGERAAASFEVRDMAPDVLLI 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL + A+ +GA+ L +H N LQE IQ NG+T+F ++ ++ Sbjct: 130 GNIGLAQLT-KAAMPDISNALDRVGANALAVHANSLQEAIQGNGDTDFTGSLHRLCDVAG 188 Query: 181 AMDVPLLLKEVGCGLSSMDIEL--GLKSG--IRYFDIAGRGGTSWSRIESHRDLESDIGI 236 A+D PLLLKEVG G+ + + L L G + D+AG GGTSWSR+E Sbjct: 189 ALDCPLLLKEVGHGIGARAVALLAQLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGELRYP 248 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWGIPT ++ R + SGG+R G+D K+I LGA + LA P L PA++ Sbjct: 249 DLADWGIPTAQAIVEVRQALPTIPLVGSGGIRTGMDAAKAIALGADVVALARPLLAPAIE 308 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+DAV ++ +E + + G + L Sbjct: 309 SADAVEDRLQRFIEELRICLHCCGATDLNAL 339 >gi|221217848|ref|ZP_03589315.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 72a] gi|224533344|ref|ZP_03673938.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi CA-11.2a] gi|225549978|ref|ZP_03770939.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 118a] gi|221192154|gb|EEE18374.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 72a] gi|224513509|gb|EEF83866.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi CA-11.2a] gi|225369437|gb|EEG98889.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 118a] Length = 354 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 176/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGVSYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 NLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|225548916|ref|ZP_03769893.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 94a] gi|225370519|gb|EEG99955.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 94a] Length = 354 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 NLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|224531898|ref|ZP_03672530.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia valaisiana VS116] gi|224511363|gb|EEF81769.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia valaisiana VS116] Length = 354 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 176/332 (53%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFDFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEFIRDFALKRYAHNIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE++ NG+ NF + IA LS + Sbjct: 128 GAVQV-VEFGIFKIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL++KE G G+S D++ L+ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 IPLIVKETGFGISPRDVKELLRLGASYIDLAGSGGTNWVLVEGMKGDNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ + ASGG G+DI K I LGA L G+A+ L+ +S DAV Sbjct: 247 PSIFTL-LSIDDSLKTNIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYESGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + EL N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKNLSELRNNKYFL 337 >gi|332799295|ref|YP_004460794.1| Isopentenyl-diphosphate delta-isomerase [Tepidanaerobacter sp. Re1] gi|332697030|gb|AEE91487.1| Isopentenyl-diphosphate delta-isomerase [Tepidanaerobacter sp. Re1] Length = 348 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/335 (35%), Positives = 191/335 (57%), Gaps = 13/335 (3%) Query: 5 RKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +HI + + + RN FDD ++H L EI+ +++D S KL+ P++I++ Sbjct: 9 RKKEHIKYSMLLEKNLKRNA--FDDIKILHNCLSEININDIDLSTNLQSIKLTSPIIINA 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG K INR LA A+K +AMAVGSQ + + N+I SF++ R+ P ++ +N Sbjct: 67 MTGGI-KEGRTINRELAKIAKKLGLAMAVGSQTIALKNPNSIASFQITREINPDGIIFAN 125 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A D +++A+QA+ ++ AD L +HLN QE++ G NF + IA + + Sbjct: 126 LSA-----DSTLKEANQAIEMINADALQIHLNVPQEVMMKEGRKNFTGIVDNIAEIVDNI 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P+++KEVG G++ + + K+G++ DI G GGT++ IE+ R +S QDWG Sbjct: 181 NIPVIVKEVGFGIAKEEAIILAKNGVKIIDIGGSGGTNFIAIENARS-KSKAFRHLQDWG 239 Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 IPTP+SL E+ ++ I+SGGL+NG+D KS+ LGA A FL + A Sbjct: 240 IPTPISLIEVIDAVGDKVDTISSGGLKNGLDAAKSLALGAKATAFAGYFLYILLKKGPSA 299 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I + KE M ++GTK +EL +I+ Sbjct: 300 LEKYILQIEKEIKYVMAMVGTKNFEELQQRPVIIQ 334 >gi|115377887|ref|ZP_01465073.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] gi|115365102|gb|EAU64151.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] Length = 319 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 14/306 (4%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 L+H A+PE+ ++D S FLGK+L PLLI+ MTGG + R+N++LA AE+ +A Sbjct: 2 RLVHCAMPELDAGDLDLSTRFLGKRLHCPLLITGMTGGTERA-GRVNKDLATLAERYGLA 60 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGA 146 VGSQR M SF++R AP L+ N+G A +L D GV++ +A+ A Sbjct: 61 FGVGSQRAMSEAPERAASFQVRDVAPSVALLGNIGLYQAARLGVD-GVRRLMEAIE---A 116 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 DG+ LHLN QE+ QP G+ +F + + L A LL+KE GCG+ ++ LK Sbjct: 117 DGMALHLNAGQELTQPEGDRDFRGGYAVVEGLVKAFGSRLLVKETGCGIGP-EVARRLKE 175 Query: 207 -GIRYFDIAGRGGTSWSRIESHR--DLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFI 262 G+ D++G GGTSW R+E R L +++G F WGIPT ++ R E + + Sbjct: 176 LGVSNIDVSGLGGTSWVRVEQLRAKGLLAELGAEFSGWGIPTAAAVASVRQAVGPEVRLV 235 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 ASGG+R G+D+ K + LGA + G+A P K + + A++ + +M L G+ Sbjct: 236 ASGGIRTGLDVAKVLALGADVAGMALPLFKAQQEGGLEGAEKALQLILAGLRQAMLLTGS 295 Query: 322 KRVQEL 327 + EL Sbjct: 296 RGCAEL 301 >gi|67527051|gb|AAY68320.1| hypothetical protein [uncultured marine bacterium 66A03] Length = 347 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 125/345 (36%), Positives = 195/345 (56%), Gaps = 23/345 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIH---------RALPEISFDEVDPSVEFL 51 M+ D I+ KD ID +K ++++H ALPE+ FD+VD S EFL Sbjct: 1 MITPTTKDLISSARKDIHIDLSKSELSRFNIVHPLDLITLPHNALPEMDFDDVDTSCEFL 60 Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 K+LSFP +I+ MTGG + R+N A A + +A VGSQR ++ + K ELR Sbjct: 61 NKELSFPFMITGMTGGTPRG-NRLNLAFAEVANQCGIAFGVGSQRSSIANCKSQK--ELR 117 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + AP +I N+G +QL G++ A A+ L AD L +HLNPLQEIIQP G +N+ + Sbjct: 118 KLAPKIPIIGNIGGIQLAQKNGLELARAAIEDLEADALAIHLNPLQEIIQPEGESNWRGV 177 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--D 229 + I + P+L+KEVG G+S + G+ + D+A GGTSW+RIE+ R + Sbjct: 178 LNSIEKAVKTLPCPILVKEVGAGISLPVAKKLHNVGVYHIDVACAGGTSWARIEAERLPN 237 Query: 230 LESDIGIVFQDWG-IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + ++ F DWG + T + EM R + I SGGLRNG+D+ K + LG +GG AS Sbjct: 238 SQRELYEPFLDWGHLITDILPEM-RQTLQQVTIIGSGGLRNGLDLAKLLYLGCHIGGGAS 296 Query: 289 PFLKPAMDSSDAVVA------AIESLRKEFIVSMFLLGTKRVQEL 327 LK ++++ + V ++++++++ +S+FL G+ + +L Sbjct: 297 LLLK-SLETEELEVKQEHLFQSLKTIKEQLSISLFLTGSNKADDL 340 >gi|52842268|ref|YP_096067.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377135|sp|Q5ZTV7|IDI2_LEGPH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|52629379|gb|AAU28120.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 342 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 117/330 (35%), Positives = 166/330 (50%), Gaps = 11/330 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ K + P +ISSM Sbjct: 11 RKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE---LRQYAPHTVLIS 121 T G++ +E IN L A KTK AM VGSQR +D A +FE LR+ P L S Sbjct: 71 TAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQA--AFEWTPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR----DLESDIGIV 237 + P+++KE GCG S + G+ +I+G GGT W RIE HR + Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVEISGVGGTHWGRIEGHRANKDPIRQRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+ S Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALGS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDL 336 >gi|145220348|ref|YP_001131057.1| isopentenyl pyrophosphate isomerase [Prosthecochloris vibrioformis DSM 265] gi|189044241|sp|A4SGE6|IDI2_PROVI RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145206512|gb|ABP37555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeovibrioides DSM 265] Length = 355 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 18/342 (5%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H++I + D + + L H ALPE+++D + +FLGK++ PL+IS Sbjct: 11 ERKHSHVDICLRGDVAFSTITTGLERYRLRHNALPELNYDNLSTETDFLGKRIGAPLMIS 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG ++ E +N LA AAE+ ++ + VGS R + + SF + R++AP T + + Sbjct: 71 SMTGGYSEAAE-LNGKLAEAAERFQLPLGVGSMRQALEESSHRDSFAVVRRHAPTTQIFA 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ + ++ ADGL +HLN QE+ QP G T+F + ++A +++ Sbjct: 130 NIGAPEIAKGLSSDDLQTMIEMIRADGLIIHLNAAQELFQPEGGTDFRRVLDEVAAITAK 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--------DLESD 233 + VP++ KEVGCG+S+ L +G+R D+AG GG SW ++E R D S Sbjct: 190 LSVPVIAKEVGCGISAPVARQLLNAGVRVIDVAGAGGISWQKVEEARYTRRFGTDDRFST 249 Query: 234 IGI-VFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLAS 288 G+ +WG PT L IASGG+++G+DI KSI LGA L A Sbjct: 250 RGLEELLNWGTPTAECLVAVNALRENPTPPFSLIASGGIQSGIDIAKSIALGADLAASAG 309 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L+ S + + + + +MFL G+ + EL N Sbjct: 310 ALLRSL--HSGTLEETLTTWMNDLRAAMFLTGSATIAELQNN 349 >gi|219684388|ref|ZP_03539332.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii PBr] gi|219672377|gb|EED29430.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii PBr] Length = 354 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 112/327 (34%), Positives = 173/327 (52%), Gaps = 4/327 (1%) Query: 9 HINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN 68 HI I + F L H AL + +F E+ E G ++ P+ ISSMTGG Sbjct: 14 HIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNINMPVFISSMTGGG 73 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 K N++L A K+ + +GS +++F I F L++YA L +N+GAVQ+ Sbjct: 74 -KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYITDFSLKRYAYDIPLFANIGAVQI 132 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS + VP ++ Sbjct: 133 -VEFGISRIAEMIKRLEVDAIVIHLNAGQELMNVNGDRNFKGIKESIANLSEFISVPSIV 191 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 KE G G+S D++ K G+ Y D+AG GGT+W +E R + ++ F DWGIP+ + Sbjct: 192 KETGFGISPNDVKELFKLGVSYVDLAGSGGTNWVLVEGMRSNDLNVASCFSDWGIPSIFT 251 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIES 307 L ++ + ASGG G+DI+K I LGA L G+A+ L+ +S DAV++ Sbjct: 252 L-LSIDDSLKTNVFASGGYETGMDIVKGIALGAKLIGVAAVVLRAFYNSGEDAVISLFSD 310 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + EL N + Sbjct: 311 YEHVLKMSMFLSGSKSLSELRKNKYFL 337 >gi|257065707|ref|YP_003151963.1| isopentenyl pyrophosphate isomerase [Anaerococcus prevotii DSM 20548] gi|256797587|gb|ACV28242.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus prevotii DSM 20548] Length = 336 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 113/324 (34%), Positives = 178/324 (54%), Gaps = 11/324 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K I +D ++ H AL +++ +E+D S+EFLG+++S PL++++M Sbjct: 7 RKDEHIENYLKSEII--TNTLLEDIYIEHNALSDMNMEEIDTSIEFLGRRISMPLMVNAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN +L+ E + MA GS+ + D + SF L + + I NLG Sbjct: 65 TGGGEAGSD-INEDLSSICEAVGIPMASGSEAIAIKDEESRDSFTLLK-DKDIIKIGNLG 122 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + + DF K ++ AD + +HLN QE++ P G+ +F L I L +D Sbjct: 123 SERSLEDFIFAK-----DLIDADIMQVHLNIAQELVMPEGDRDFRGLGENIRNLVEKLDT 177 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++KE G G+S L G+ Y D+AG+GGT++ IE RD+E+D F DWGIP Sbjct: 178 PIIVKETGSGISKSVASKLLDMGVEYIDVAGKGGTNFIEIEDLRDVETDFS-EFYDWGIP 236 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 T S+ R + IASGGLRN DI+KSII+GA + ++ L+ + +A Sbjct: 237 TAKSIIDVRSVSEDVFIIASGGLRNATDIVKSIIIGADMAAMSGEVLRYLLHGGYEACED 296 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 ++ L+ + + M LLG K ++EL Sbjct: 297 FLKDLQYKIKIIMCLLGVKNIEEL 320 >gi|218249943|ref|YP_002375184.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi ZS7] gi|218165131|gb|ACK75192.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi ZS7] Length = 359 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 14 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L +N+ Sbjct: 74 MTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 133 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 192 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 252 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 310 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 311 GLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 342 >gi|15595029|ref|NP_212818.1| isopentenyl pyrophosphate isomerase [Borrelia burgdorferi B31] gi|2688617|gb|AAC67033.1| carotenoid biosynthesis protein, putative [Borrelia burgdorferi B31] Length = 360 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 15 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 74 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L +N+ Sbjct: 75 MTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 133 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 134 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 192 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 193 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 252 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 253 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 311 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 312 GLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 343 >gi|223889428|ref|ZP_03624014.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 64b] gi|226321382|ref|ZP_03796909.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi Bol26] gi|13878541|sp|O51627|IDI2_BORBU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|223885114|gb|EEF56218.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 64b] gi|226233178|gb|EEH31930.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi Bol26] Length = 354 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANV 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS + Sbjct: 128 GAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDFLS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A+ L+ DS DAV Sbjct: 247 PSVFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +SMFL G+K + E N + Sbjct: 306 GLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 337 >gi|328958134|ref|YP_004375520.1| isopentenyl diphosphate isomerase [Carnobacterium sp. 17-4] gi|328674458|gb|AEB30504.1| isopentenyl diphosphate isomerase [Carnobacterium sp. 17-4] Length = 356 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 192/328 (58%), Gaps = 10/328 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 N+RK +H+++ K R K FD + +H + PE+S + S F G +++ P I Sbjct: 4 TNNRKNEHVSLAEKFAKETR-KSDFDSFRFVHHSFPEMSVADASISTSFAGLEMTSPFYI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ +++N LA+ A +T +AMA GS D + S+ + R+ P+ ++ Sbjct: 63 NAMTGGST-WTKKVNEKLALIARETGIAMATGSISAALKDPSVEDSYTIVREVNPNGMVF 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG Q ++ A +AV ++ A+ L +H+N QEI+ P G+ +F++ +++ + Sbjct: 122 ANLGTGQT-----LENAKKAVDLIQANALQIHVNSPQEIVMPEGDRDFSNWLTELENIVH 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KEVG G+S I+ G++ DI+G+GGT++++IE++R +D Sbjct: 177 HLAVPVIVKEVGFGMSRETIQQLTSIGVKTIDISGQGGTNFAQIENYRRTTEKFD-YLED 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG T +SL A+P+ NE + +ASGG+RN +DI+K++ LGA G++ FL A+ D + Sbjct: 236 WGQSTVISLVEAQPFINEIELLASGGIRNPLDIVKALSLGAKGVGISGLFLHMALRDGVE 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + + + + M LLG K +++L Sbjct: 296 ATILEVNTWKNQIASIMTLLGKKSIKDL 323 >gi|224534520|ref|ZP_03675096.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia spielmanii A14S] gi|224514197|gb|EEF84515.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia spielmanii A14S] Length = 354 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 113/332 (34%), Positives = 175/332 (52%), Gaps = 4/332 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K HI+I + F L H AL + +F E++ E G +S P+ ISS Sbjct: 9 ENKKRHIDICLNKNDVKSGCNFLKFVRLKHNALSDFNFSEINIKEEVFGYNISMPVFISS 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K N++L A K+ + +GS +++F IK F L+ +A + L +N+ Sbjct: 69 MTGGS-KEGNDFNKSLVKIANCLKIPIGLGSFKLLFKYPEYIKDFSLKSHACNIPLFANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ Sbjct: 128 GAVQI-AEFGISRIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAQLSNFSS 186 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KE G G+S D++ K G+ Y D+AG GGT+W +E + +I F DWGI Sbjct: 187 VPVIVKETGFGISPNDVKELFKLGVFYIDLAGSGGTNWVLVEGMKSNNLNIASCFSDWGI 246 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 P+ +L ++ +A ASGG G+DI K I LGA L G+A L+ +S D V Sbjct: 247 PSTFTL-LSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAGVVLRAFYNSGEDGVF 305 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +SMFL G+K + E N + Sbjct: 306 SLFSDYEHVLKMSMFLSGSKNLSEFRNNKYFL 337 >gi|119356224|ref|YP_910868.1| isopentenyl pyrophosphate isomerase [Chlorobium phaeobacteroides DSM 266] gi|166226196|sp|A1BDG7|IDI2_CHLPD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119353573|gb|ABL64444.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 111/350 (31%), Positives = 191/350 (54%), Gaps = 20/350 (5%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK++H+ I + + + + + H+A+PEI++ +++ S LG+ + PL+IS Sbjct: 14 ERKLNHVEICLHGNVSFEGTTTGLERYAIEHQAVPEINYADINLSATLLGRTIGAPLMIS 73 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG ++ +NR A AAE ++ + VGS R ++ +SF + R+ AP + + Sbjct: 74 SMTGGYHEAA-TLNRQFAQAAEHFRIPLGVGSMRQALENNEHRESFAVVRKAAPSVPVFA 132 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ + + ++ ADGL +HLN QE+ QP GNTNF ++A L++ Sbjct: 133 NIGAPEVAAGLESSQIETMLDLIQADGLIVHLNAAQELFQPEGNTNFHGFLDQLASLTAK 192 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---------S 232 VP++ KEVG G+S+ L + +G++ D+AG GGTSW ++E R ++ Sbjct: 193 TPVPVIAKEVGSGISAEAARLLIDAGVKVIDVAGAGGTSWQKVEEVRYIKRFGNENRFSP 252 Query: 233 DIGIVFQDWGIPTPLSL-EMARPYCNEAQF-----IASGGLRNGVDILKSIILGASLGGL 286 + +WGIPT L E+ R N Q+ IASGG+++G+D+ K+I+LGAS+ Sbjct: 253 EALNELLNWGIPTATCLEEIGRLKKNHPQYQPIEIIASGGIQSGIDVAKTILLGASVAAS 312 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A LK + ++ IE + MFL G+ +++L ++H Sbjct: 313 AGRLLKALHEGK--LLQTIEMWLNDLKAVMFLTGSLSLEQLQKKRMTLKH 360 >gi|320101531|ref|YP_004177123.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfurococcus mucosus DSM 2162] gi|319753883|gb|ADV65641.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfurococcus mucosus DSM 2162] Length = 372 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 187/339 (55%), Gaps = 16/339 (4%) Query: 2 VNDRKIDHINIVCKDPGID---RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 V RK+ HI V DP +D + + L+HRA P +VD S+EFLG +L P Sbjct: 4 VQSRKLHHIE-VALDPRVDFEDNCSDLYREIQLVHRAFPGFELGDVDSSLEFLGYRLEAP 62 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFEL-RQYA 114 L+I+ MTGG+ + INR LA AEK +VA+ VGSQR + + + + S+ + R A Sbjct: 63 LMITGMTGGHPSLTG-INRALAELAEKKRVAIGVGSQRAIVTSGFREDVVASYRVVRDVA 121 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-LSS 173 +I N+G LN D + V VL AD L +HLNP QE+IQP G+T F L Sbjct: 122 RDVPVIGNIGLNTLN-DVEYDTIVKLVEVLEADALAIHLNPAQEVIQPEGDTRFNHRLLE 180 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL--- 230 K+ L + P+++KEVG GLS +++ +G+R +D+AG GT+W+ +E+ R+ Sbjct: 181 KVRELVKTLGKPVIVKEVGNGLSMETVKVFHDAGVRIYDVAGACGTNWALVEALRNQPGT 240 Query: 231 -ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + GI+ WGIPTPLS+ R ++ IASGG+ +G +I+LGA + GLA P Sbjct: 241 PRYECGIMLAKWGIPTPLSVIETRFTATDSFIIASGGVWDGFKAAVNIVLGADMAGLAKP 300 Query: 290 FLKPAMDSSDAVVAA-IESLRKEFIVSMFLLGTKRVQEL 327 LK + +++ E +MFL G + ++EL Sbjct: 301 LLKKLLKEGLKQAETYLDTYVFELKTAMFLSGARTLREL 339 >gi|294501087|ref|YP_003564787.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] gi|294351024|gb|ADE71353.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] Length = 350 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKIDHI+ + DD +H +LP +V + LS P+ I++M Sbjct: 6 RKIDHIHHAIQTG--QHRLHGLDDIRFVHNSLPNTGVQDVHIDTKIGELLLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + ERINR+ A A ++AMAVGSQ D +S+ + RQ P+ ++ +NL Sbjct: 64 TGGGGQETERINRSFAQIAHHGQLAMAVGSQMAAIKDEKEEQSYRVVRQENPNGIIFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV +L A+GL +HLN +QE++ P G+ +F D +I + + Sbjct: 124 GS-----EATVEQAKKAVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIVREVT 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S+ ++ G+ DI G GGT++S+IE+ R + F DWGI Sbjct: 179 VPVIVKEVGFGMSAQAVQKLKDVGVEIVDIGGYGGTNFSKIENERRAKHF--HFFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + I SGG++ +DI KSI LGAS G+A FL M S +AVV Sbjct: 237 STAASLAEVSQHVEGMSIIGSGGIQTSMDIAKSIALGASATGMAGYFLSILMKSGLEAVV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I L +E M LG + +L Sbjct: 297 EEIAELHEELTFIMAALGATSIAKL 321 >gi|254496057|ref|ZP_05108958.1| isopentenyl pyrophosphate isomerase [Legionella drancourtii LLAP12] gi|254354699|gb|EET13333.1| isopentenyl pyrophosphate isomerase [Legionella drancourtii LLAP12] Length = 342 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 169/328 (51%), Gaps = 7/328 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + + D HL+H ALP++ F E+ + GK + P LISSM Sbjct: 11 RKQDHIKLSLMAENQTTDLSTLDTIHLVHDALPDLDFSEIIIAGTRFGKIVKKPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 T G+ + + INR+L A ++ AM VGSQR +D A ++ LR+ P L SNL Sbjct: 71 TAGHRRA-KHINRHLVEACAQSGWAMGVGSQRRELTDPKAAFEWKHLRRDFPQVSLYSNL 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G QL + + + L AD L +H NPLQE +QP G TN+ + + + Sbjct: 130 GIAQL-INTPLADIQRLTDALQADALIIHCNPLQECMQPEGTTNYKGCWQALENVVETLA 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIVFQ 239 +P+++KE GCG S + GI DI G GGT W RIE HR + I I F+ Sbjct: 189 LPIIVKETGCGFSRNTMMHLNDIGIAAIDIGGLGGTHWGRIEGHRATQDSIRHQAAITFK 248 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 +WGI T ++ A + SGG+ NG++ K LGA+ G A P L+ A++S++ Sbjct: 249 NWGIDTATAVRNAAALKPSFEIWGSGGVLNGLNAAKLFALGATTVGYAKPMLEAALESAE 308 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + ++ E V+MF G++ + +L Sbjct: 309 HVHTKMLTIEYELKVAMFCTGSRVLDDL 336 >gi|169824841|ref|YP_001692452.1| isopentenyl pyrophosphate isomerase [Finegoldia magna ATCC 29328] gi|167831646|dbj|BAG08562.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 29328] Length = 336 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 181/328 (55%), Gaps = 13/328 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI ++VD SVEF GKK+ +P +I++ Sbjct: 2 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDVDLSVEFNGKKIDYPFMINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ---YAPHTVLI 120 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + ++I Sbjct: 60 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVEDEAIESFELVRENLIKNENIVI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NL A + ++ +A+ ++ +D LHLNP+QE+I G+ F+ + I + Sbjct: 119 GNLSARE-----SLESVKKAIEMIDSDMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVE 173 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I G+RY DIAG GGT++S IE +R + + F Sbjct: 174 NVNVPIIVKEVGYGMSKKTIYELYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFS-EFYC 232 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT L + ++ IASGG++ +DI+K+++LGA + ++ L M Sbjct: 233 WGIPTAKILLEMKDKPDDLFLIASGGIKTAIDIVKALVLGADMTAMSGEVLSYLMHGGYE 292 Query: 301 VVAA-IESLRKEFIVSMFLLGTKRVQEL 327 ++SL + + M +LG + + EL Sbjct: 293 FAKEFLDSLIYKLKMLMVMLGARNISEL 320 >gi|302379522|ref|ZP_07268007.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna ACS-171-V-Col3] gi|303234519|ref|ZP_07321156.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna BVS033A4] gi|302312429|gb|EFK94425.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna ACS-171-V-Col3] gi|302494353|gb|EFL54122.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna BVS033A4] Length = 336 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 182/328 (55%), Gaps = 13/328 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI ++VD SVEF GKK+ +P +I++ Sbjct: 2 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDVDLSVEFNGKKIDYPFMINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ---YAPHTVLI 120 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + ++I Sbjct: 60 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVEDEAIESFELVRENLIKNENIVI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NL A + ++ +A+ ++ +D LHLNP+QE+I G+ F+ + I + Sbjct: 119 GNLSARE-----SLESVKKAIEMIDSDMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVE 173 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I G+RY DIAG GGT++S IE +R + + F Sbjct: 174 NVNVPIIVKEVGYGMSKKTIYELYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFS-EFYC 232 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WGIPT L + ++ IASGG++ +DI+K+++LGA + ++ L M + Sbjct: 233 WGIPTAKILLEMKDKPDDLFLIASGGIKTAIDIVKALVLGADMTAMSGEVLSYLMHGGYE 292 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++SL + + M +LG + + EL Sbjct: 293 FAKEFLDSLIYKLKMLMVMLGARNISEL 320 >gi|295706434|ref|YP_003599509.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] gi|294804093|gb|ADF41159.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] Length = 350 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKIDHI+ + DD +H +LP +V + LS P+ I++M Sbjct: 6 RKIDHIHHAIQTG--QHRLHGLDDIRFVHNSLPNTGVHDVHIDTKIGELLLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + ERINR+ A A ++AMAVGSQ D +S+ + RQ P+ ++ +NL Sbjct: 64 TGGGGQETERINRSFAQIAHHGQLAMAVGSQMAAIKDEKEEQSYRVVRQENPNGIIFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV +L A+GL +HLN +QE++ P G+ +F D +I + + Sbjct: 124 GS-----EATVEQAKKAVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIIREVT 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S+ ++ G+ DI G GGT++S+IE+ R + F DWGI Sbjct: 179 VPVIVKEVGFGMSAQAVQKLKDVGVEIVDIGGYGGTNFSKIENERRAKHF--HFFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + I SGG++ +DI KSI LGAS G+A FL M S +AVV Sbjct: 237 STAASLAEVSQHVEGMSIIGSGGIQTSMDIAKSIALGASATGMAGYFLSILMKSGLEAVV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I L +E M LG + +L Sbjct: 297 EEIAELHEELTFIMAALGATSIAKL 321 >gi|323339817|ref|ZP_08080086.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus ruminis ATCC 25644] gi|323092690|gb|EFZ35293.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus ruminis ATCC 25644] Length = 350 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/330 (36%), Positives = 187/330 (56%), Gaps = 17/330 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I K + R K + LI LPEIS DE+ S GKKL P I+ Sbjct: 13 RKDEHVMIAEK---LYRQKSTNGLERIRLIPANLPEISLDEISLSTTLAGKKLEAPFFIN 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 ++TGG+ + + +N +LA A KT VAMAVGSQ V + K FE LR+ P+ ++++ Sbjct: 70 AITGGS-QTTDALNESLARVANKTGVAMAVGSQSVAVKNAAYAKGFERLRRLNPNGIMLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA N+ F + A +A ++ AD + +HLN QE++ P G+ F L + + L+ Sbjct: 129 NLGA---NHPF--ENAERACSMIDADIIEIHLNAAQELVMPEGDAEFYWLEN-LKRLNEK 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPLL+KEVG G++ ++L ++G Y D+AG GGT+++ IE+ R + Q+ Sbjct: 183 LQVPLLVKEVGTGMTPQTLKLLAENGFSYVDLAGAGGTNFAAIENERRKNKETLAFMQEL 242 Query: 242 GIPTPLSLEMARPYCNE---AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 G+ T SL A+ + NE + ASGG+R+ DI+K ++LGA G++ FL + D Sbjct: 243 GLTTAESLLGAQKHRNELGRLKLTASGGIRDAQDIVKCLVLGAENVGISGMFLHVLLKDG 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + A IE L+ M LLG +++ EL Sbjct: 303 EDGLAAKIEDLKTGIRALMALLGCRKISEL 332 >gi|118465531|ref|YP_883056.1| isopentenyl pyrophosphate isomerase [Mycobacterium avium 104] gi|118166818|gb|ABK67715.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium avium 104] Length = 344 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 121/324 (37%), Positives = 171/324 (52%), Gaps = 10/324 (3%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK HI++ DP D D + L + AL + S ++D S F G L P+LI + Sbjct: 7 RKRRHIDVCLSDPVEFDGVTTGLDRYRLPYHALTQTSLGDIDVSTSFFGANLRAPILIGA 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHTVLI 120 MTGG +M + INRNLA AA++ + M +GSQR+M A SF +R AP +L Sbjct: 67 MTGGA-EMSKTINRNLAAAAQQLGIGMMLGSQRIMLDSALGERAADSFAVRDVAPDVLLF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL V +A+ +GAD L +H NPLQE +Q NG+T+F+ S++ ++ Sbjct: 126 GNIGLSQLA-KTAVPHLVKALDRVGADALAVHTNPLQEAMQHNGDTDFSGSLSRLREAAA 184 Query: 181 AMDVPLLLKEV-GCGLSSMDIELGLKSG---IRYFDIAGRGGTSWSRIESHRDLESDIGI 236 A+D P+LLKEV + EL G + D+AG GGTSWSR+E Sbjct: 185 ALDYPVLLKEVGHGIGGAAAAELVGGEGQPPVAGIDVAGAGGTSWSRVEQFVRYGELRYP 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWG+PT ++ R E +ASGG+R G+D K+I LGA + +A P L A++ Sbjct: 245 DLADWGVPTARAIVEVRRLLPEIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPAAIE 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLG 320 SS AVV + E V + G Sbjct: 305 SSAAVVDWLRPFIDELRVCLHGCG 328 >gi|288556074|ref|YP_003428009.1| isopentenyl pyrophosphate isomerase [Bacillus pseudofirmus OF4] gi|288547234|gb|ADC51117.1| isopentenyl pyrophosphate isomerase [Bacillus pseudofirmus OF4] Length = 349 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 179/325 (55%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G +R F + +H ++P+ DEVD S E G LS P+ I++M Sbjct: 6 RKLDHIEHALS-SGQERTHGF-EHIRFVHNSIPDAFVDEVDYSSEIGGLSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + + IN+ LA A + + +AVGSQ D KS+E+ RQ P+ V+ +NL Sbjct: 64 TGGGGERTKMINQQLAEVASECGIGIAVGSQMAAIRDPEERKSYEIVRQTHPNGVVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +A +AV +L A L +HLN +QE++ P G+ +F ++I + A+D Sbjct: 124 GS-----EATADQAKRAVDMLQASALQIHLNVIQELVMPEGDRDFRHTLTRIEKIKDAID 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KEVG G+S E G++ D+ G GGT++SRIE+ R E + F DWGI Sbjct: 179 VPLIIKEVGYGMSRETAETLASIGVQMIDVGGFGGTNFSRIENARR-ERKLS-YFDDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 T S+ I+SGGL++ +D++KSI LGA G A FLK M+ +A++ Sbjct: 237 NTTSSIIEVTEAAKGISVISSGGLQSALDVVKSIALGADATGFAGYFLKILMEEGQNALI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I + K+ + M LG + EL Sbjct: 297 EEINFIHKDIKMLMTALGASSLSEL 321 >gi|297587224|ref|ZP_06945869.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 53516] gi|297575205|gb|EFH93924.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 53516] Length = 341 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 110/328 (33%), Positives = 182/328 (55%), Gaps = 13/328 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI +++D S+EF GKK+ +P +I++ Sbjct: 7 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDIDLSMEFNGKKIDYPFMINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ---YAPHTVLI 120 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + ++I Sbjct: 65 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVESEAIESFELVRENLIKNENIVI 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NL A + ++ +A+ ++ AD LHLNP+QE+I G+ F+ + I + Sbjct: 124 GNLSARE-----SLESVEKAIEMIDADMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVE 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +DVP+++KEVG G++ I G+RY DIAG GGT++S IE +R + + F Sbjct: 179 NVDVPIIVKEVGYGMNKKTIYDLYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFS-EFYC 237 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WGIPT L + ++ IASGG++ +DI+K++++GA + ++ L M + Sbjct: 238 WGIPTAKILLDMQDKPDDLFLIASGGIKTAIDIVKALVIGADMTAMSGEVLSYLMHGGYE 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++SL + + M +LG + + EL Sbjct: 298 FAKEFLDSLIYKLKMLMVMLGARNISEL 325 >gi|110597591|ref|ZP_01385876.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium ferrooxidans DSM 13031] gi|110340711|gb|EAT59188.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium ferrooxidans DSM 13031] Length = 357 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 20/350 (5%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H+ I D F+ + H A+PE+SF ++ S FLG+ ++ PL+IS Sbjct: 11 ERKHSHVEICLHGDIAFSGKTTGFEHYEFEHNAVPELSFADISLSTTFLGRTIAAPLMIS 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 SMTGG ++ +N+ LA AE+ ++ + VGS R + + +SF + R+YAP + + Sbjct: 71 SMTGGYSEAT-YLNQRLAETAEQFRIPLGVGSMRQALENSSHRESFAIVRKYAPSIQIFA 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA ++ + +L ADGL +H N QE+ QP GNT+F + ++ L++ Sbjct: 130 NIGAPEIAKGLTDSDISIMLDLLEADGLIVHFNAAQELFQPEGNTDFRHVLDHLSTLTAR 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLESDIGI 236 + VP++ KEVG G+S ++G++ D+AG GGTSW ++E R ES Sbjct: 190 IPVPVIAKEVGSGISGAAATQLFEAGVKAVDVAGAGGTSWQKVEEIRYTRQFGTESRFST 249 Query: 237 ----VFQDWGIPTP------LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 +WGIPT +L+++ + + I+SGG+++G+DI KS+ LGA+LG Sbjct: 250 PALEELLNWGIPTAQCLKEIAALKISNKIFSTVELISSGGIKSGMDIAKSLALGANLGAS 309 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A LK + + IES + MFL G ++EL + +++ Sbjct: 310 AGHLLKALHEG--VLELTIESWLNDLRAVMFLTGAATIEELRSKSLIVKQ 357 >gi|300814223|ref|ZP_07094499.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511647|gb|EFK38871.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 341 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/326 (34%), Positives = 186/326 (57%), Gaps = 12/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + + FDD L H +LPE+ F E++ S FL KK++FPL+I++M Sbjct: 5 RKREHIENYLRSTYV--GNPLFDDMFLYHNSLPEVDFSEINTSTVFLNKKVNFPLMINAM 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ E INR LA A + + +AVGSQ + D + ++SF + R+ ++I NL Sbjct: 63 TGGSD-FAEDINRQLAQVANEFNIPIAVGSQTIALEDPDTVESFSVVREIVEKGIVIGNL 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A ++ A +A+ ++ AD L LHLNP QE+ G F ++ I L + +D Sbjct: 122 SARA-----SLEDAKKAIDIIRADSLQLHLNPAQELAMSEGEREFKNILKNIEELVNGLD 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLSS ++ G+R D++G GGT++ IE+ R +SD+ ++ WGI Sbjct: 177 VPIIVKEVGFGLSSDVVKRLYDIGVRNVDVSGFGGTNFFEIENLRTPDSDLSELY-GWGI 235 Query: 244 PTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 PT L++ A+ ++ + I SGG++N ++KSI+ GA + ++ L + + Sbjct: 236 PTALAIIEAKSLGLDDLKIIGSGGIKNSEQLIKSIVAGADMTAISGEILSYLVHGGVEYT 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + + +L + + M LLG K +++L Sbjct: 296 LKYLGNLIYKSKMIMLLLGAKDIKDL 321 >gi|282882184|ref|ZP_06290823.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus lacrimalis 315-B] gi|281297949|gb|EFA90406.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus lacrimalis 315-B] Length = 341 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/326 (34%), Positives = 186/326 (57%), Gaps = 12/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + + FDD L H +LPE+ F E++ S FL KK++FPL+I++M Sbjct: 5 RKREHIENYLRSTYV--GNPLFDDMFLYHNSLPEVDFSEINTSTVFLNKKVNFPLMINAM 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ E INR LA A + + +AVGSQ + D + ++SF + R+ ++I NL Sbjct: 63 TGGSD-FAEDINRQLAQVANEFNIPIAVGSQTIALEDPDTVESFSVVREIVEKGIVIGNL 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A ++ A +A+ ++ AD L LHLNP QE+ G F ++ I L + +D Sbjct: 122 SART-----SLEDAKKAIDIIRADSLQLHLNPAQELAMSEGEREFKNILKNIEELVNGLD 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLSS ++ G+R D++G GGT++ IE+ R +SD+ ++ WGI Sbjct: 177 VPIIVKEVGFGLSSDVVKRLYDIGVRNVDVSGFGGTNFFEIENLRTPDSDLSELY-GWGI 235 Query: 244 PTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 PT L++ A+ ++ + I SGG++N ++KSI+ GA + ++ L + + Sbjct: 236 PTALAIIEAKSLGLDDLKIIGSGGIKNSEQLIKSIVAGADMTAISGEILSYLVHGGVEYT 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + + +L + + M LLG K +++L Sbjct: 296 LKYLGNLIYKSKMIMLLLGAKDIKDL 321 >gi|67478626|ref|XP_654698.1| isopentenyl-diphosphate delta-isomerase [Entamoeba histolytica HM-1:IMSS] gi|56471765|gb|EAL49309.1| isopentenyl-diphosphate delta-isomerase, putative [Entamoeba histolytica HM-1:IMSS] Length = 358 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 110/333 (33%), Positives = 190/333 (57%), Gaps = 15/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DH+ C + +D L P+ S + + F K+LS PL+I +M Sbjct: 7 RKLDHLKFCCNNETQSHQSNHLEDIILEKTCFPKQSLSSIQTKINFFNKELSIPLIIGAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTVLIS 121 TGG+N ++ +N+ LAIAA +T VA+ VGSQR + +D ++S+ + R+ AP+ +I Sbjct: 67 TGGSND-VKIVNKTLAIAANETNVAIGVGSQRSGLESNDEEILESYRVVRECAPNAFIIG 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G+VQL ++G + + ++ D + +HLN QE++Q G+ N D+ ++ + S Sbjct: 126 NIGSVQLT-EYG-EVLDDLIAMIKGDAIAVHLNWEQELVQAEGDRNGIDVC-RLKEIISK 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------IG 235 + ++ K+VG G+ D+ + + G++ DIAG GGTS++ +E R E +G Sbjct: 183 WNGTVIGKQVGHGMMKKDVMICQELGMKAVDIAGIGGTSFAGVECLRAKEKKQYQQNRLG 242 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + D+G+PT +S+ A C+ IASGG+RNG++I+KS+ LGASL + PF+ + Sbjct: 243 QLLWDFGVPTAMSIWEA-SQCS-LPIIASGGIRNGLEIVKSMTLGASLASITKPFVSLYL 300 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + S+A + + ++ E S+FL G V E++ Sbjct: 301 EGSEACINYVNFIKNEIQSSLFLCGCPSVNEVH 333 >gi|126458645|ref|YP_001054923.1| isopentenyl pyrophosphate isomerase [Pyrobaculum calidifontis JCM 11548] gi|126248366|gb|ABO07457.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum calidifontis JCM 11548] Length = 352 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 189/336 (56%), Gaps = 16/336 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI++ D +FD+ LIH ALPE+ +VD S +FLG K+S P I Sbjct: 1 MEKRKDDHIHLAYSDVS-QVGSPWFDEVLLIHNALPELDLADVDLSADFLGAKVSAPFGI 59 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG ++ +IN LA AAE+ + M VGSQRV + + +FE+ +Q+AP + Sbjct: 60 GAMTGGT-ELAGKINAELAKAAEEFGIPMYVGSQRVALQNPSVRWTFEVVKQHAPTIPKV 118 Query: 121 SNLGAVQLN---YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL+ + V+ +AV ++ A + +HLN QE++QP G F + KI L Sbjct: 119 ANLGAPQLSALPEEKVVEWVVEAVEMIDAYAVAIHLNAAQEVVQPEGEPRFRGVLEKIKL 178 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLE 231 + A+ P+++KEVG G+S ++ L + D+ G GGTS+ IE R +L Sbjct: 179 VKRAVGKPVIVKEVGNGISK-EVAERLAGVVDAIDVGGLGGTSFVSIEGARALGAGLELY 237 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I VF+ WGIPT S+ R IASGG+R+G+D +++ LGA+ ++ P L Sbjct: 238 RRISEVFKTWGIPTAASICEVRSVFG-GYVIASGGVRSGLDGARALALGANFFTMSQPLL 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +D + I ++ E V+MFL+G +RV +L Sbjct: 297 RAVLDGR--IREEISAVLTELKVAMFLVGARRVSDL 330 >gi|183984780|ref|YP_001853071.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium marinum M] gi|226707320|sp|B2HGA4|IDI2_MYCMM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183178106|gb|ACC43216.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium marinum M] Length = 348 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/327 (35%), Positives = 173/327 (52%), Gaps = 16/327 (4%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 D +N V G++R + F+ AL + S ++D S EF G L P+LI +MTGG Sbjct: 22 DEVNYVGVTTGLERYRLPFN-------ALTQTSLADIDLSAEFFGAPLRAPVLIGAMTGG 74 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHTVLISNLG 124 ++ INRNLA AA++ + M +GSQR+M D A SF +R+ AP +LI N+G Sbjct: 75 A-ELSATINRNLATAAQRLGIGMMLGSQRIMLDDARGQRAASSFAVREVAPDVLLIGNIG 133 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 QL V A+ +GA+ L +H N LQE +Q G+T+F+ ++ + +D Sbjct: 134 LAQLTKAA-VPAVAAALRRVGANALAVHANSLQEAMQHGGDTDFSGSLGRLRDAADLLDY 192 Query: 185 PLLLKEVGCGLSSMDIE--LGLKSG--IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+LLKEVG G+ + + L L G + D+AG GGTSWSR+E D Sbjct: 193 PVLLKEVGHGIGAAAVAQLLRLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGELRYPELAD 252 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT ++ R +ASGG+R G+D K+I LGA + +A P L PA++S+ A Sbjct: 253 WGIPTAEAIVEVRQALPAVPLVASGGIRTGMDAAKAIALGADVVAIARPLLAPAIESATA 312 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ E V + G + + L Sbjct: 313 VQGWLQLFLDELRVCLHCCGARDLTSL 339 >gi|321311759|ref|YP_004204046.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis BSn5] gi|320018033|gb|ADV93019.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis BSn5] Length = 349 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 112/326 (34%), Positives = 185/326 (56%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I++ Sbjct: 5 ERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG K+ IN++LA AA + + +AVGSQ D + S+E+ R+ P+ ++ +N Sbjct: 63 MTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S + Sbjct: 123 LGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALERIEQICSHV 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++G DI G GGT++S+IE+ R + I F WG Sbjct: 178 SVPVIVKEVGFGMSKESAGKLYEAGAAAVDIGGYGGTNFSKIENLRR-QRQISF-FNSWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I T SL R + IASGGL++ +D+ K+I LGAS G+A FLK DS + + Sbjct: 236 ISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + +E + M +LGT+ + +L Sbjct: 296 LEEIQLILEELKMIMTVLGTRTIADL 321 >gi|167630051|ref|YP_001680550.1| isopentenyl-diphosphate delta-isomerase, type 2 [Heliobacterium modesticaldum Ice1] gi|167592791|gb|ABZ84539.1| isopentenyl-diphosphate delta-isomerase, type 2 [Heliobacterium modesticaldum Ice1] Length = 373 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 130/352 (36%), Positives = 186/352 (52%), Gaps = 32/352 (9%) Query: 5 RKIDHI-NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK+DHI + D G N F D L+H ALP + F VD SV ++GK+L+ PLLI++ Sbjct: 7 RKLDHIRQALALDDGPLSNG--FQDVRLLHDALPTVDFRAVDLSVPWMGKRLTMPLLINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG + ++ INR LA A + VA+AVGSQ D S+ + R P V+ +N Sbjct: 65 ITGGTS-LVTEINRRLARLAARNGVAVAVGSQAAALRDPRLRDSYRVVRDENPDGVVFAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 + N + V+KA +AV +L ADGL +HLNP QE+ G+ +F S IA L Sbjct: 124 V-----NPNTPVEKALEAVTMLEADGLQVHLNPAQELAMAEGDRDFRHWSGNIAELVRHC 178 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VPL++KEVG G+S + L G+R D+ G GGT++ IE R S F+ WG Sbjct: 179 PVPLIVKEVGAGISMETAKRLLDLGVRCIDVGGAGGTNFVAIELRRQGLSV--PAFEAWG 236 Query: 243 IPTPLSL-------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 IPT SL E + ++A IASGG+R+G + K++ +GASL G+A LK + Sbjct: 237 IPTAASLAETVWAVESRQSVGDKATIIASGGIRDGWEAAKALSMGASLVGIAGAPLKGLL 296 Query: 296 DSS-------------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 S A I+S R V++ L G+ R+ +L L+ Sbjct: 297 GGSPGAFSPSGNAEGDKAAQGWIDSFRHALQVNLALTGSSRIADLQNRPCLL 348 >gi|224477332|ref|YP_002634938.1| isopentenyl pyrophosphate isomerase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421939|emb|CAL28753.1| putative isopentenyl diphosphate isomerase [Staphylococcus carnosus subsp. carnosus TM300] Length = 380 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 110/315 (34%), Positives = 177/315 (56%), Gaps = 17/315 (5%) Query: 5 RKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ I DP + FD +H ++P I D+VD SV +S PL I+ Sbjct: 43 RKDDHVKIAMAQNDPQLTD----FDKVRFVHHSIPSIDVDQVDLSVNLPDFSMSSPLYIN 98 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + ++IN LA+ A +T +A+AVGS +H SF++ R+ P ++ S Sbjct: 99 AMTGGS-EWTKQINEKLAVVARETGLAIAVGSTHAALRNHKMASSFDIVRKTNPDGIIFS 157 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D A Q+V +L A+ L +H+N QE++ P GN F++ ++ + Sbjct: 158 NVGA-----DVPADLAKQSVEMLQANALQVHVNSPQELVMPEGNRTFSNWMENLSEIVQT 212 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S I+ + GIRY D++GRGGT++ IE+ R D+ Q+W Sbjct: 213 VNVPVIVKEVGFGMSRELIQDLKEIGIRYVDVSGRGGTNFVNIENERRQLKDMSY-LQNW 271 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G T SL ++ N+ ASGG+RN +D +K + LGA G++ PFL+ ++ + Sbjct: 272 GQSTVESLLESKNLQNQVTVFASGGVRNPLDAIKCLALGAEAVGMSRPFLEQV--ENNGI 329 Query: 302 VAAIESLRKEFIVSM 316 +E + +EFI M Sbjct: 330 TQTVEFV-EEFIEQM 343 >gi|118616239|ref|YP_904571.1| isopentenyl pyrophosphate isomerase [Mycobacterium ulcerans Agy99] gi|166226201|sp|A0PL81|IDI2_MYCUA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|118568349|gb|ABL03100.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium ulcerans Agy99] Length = 348 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 118/327 (36%), Positives = 172/327 (52%), Gaps = 16/327 (4%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 D +N V G++R + F+ AL + S ++D S EF G L P+LI +MTGG Sbjct: 22 DEVNYVGVTTGLERYRLPFN-------ALTQTSLADIDLSAEFFGAPLRAPVLIGAMTGG 74 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHTVLISNLG 124 ++ INRNLA AA++ + M +GSQR+M D A SF +R+ AP +LI N+G Sbjct: 75 A-ELSAMINRNLATAAQRLGIGMMLGSQRIMLDDARGQRAASSFAVREVAPDVLLIGNIG 133 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 QL V A+ +GA+ L +H N LQE +Q G+T+F+ ++ + +D Sbjct: 134 LAQLTKAA-VPAVAAALRRVGANALAVHANSLQEAMQHGGDTDFSGSLGRLRDAADLLDY 192 Query: 185 PLLLKEVGCGLSSMDIE--LGLKSG--IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+LLKEVG G+ + + L L G + D+AG GGTSWSR+E D Sbjct: 193 PVLLKEVGHGIGAAAVAQLLRLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGELRYPELAD 252 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT ++ R +ASGG+R G+D KSI LGA + +A P L PA++S+ A Sbjct: 253 WGIPTAEAIVEVRQALPAVPLVASGGIRTGMDAAKSIALGADVVAIARPLLAPAIESATA 312 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ E V + G + L Sbjct: 313 VQDWLQLFLDELRVCLHCCGAPDLTSL 339 >gi|41409177|ref|NP_962013.1| isopentenyl pyrophosphate isomerase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397997|gb|AAS05627.1| hypothetical protein MAP_3079c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 344 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 167/310 (53%), Gaps = 10/310 (3%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK HI++ DP D D + L + AL + S +++ S F G L P+LI + Sbjct: 7 RKRRHIDVCLSDPVEFDGVTTGLDRYRLPYHALTQTSLGDINVSTSFFGANLRAPILIGA 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHTVLI 120 MTGG +M + INRNLA AA++ + M +GSQR+M A SF +R AP +L Sbjct: 67 MTGGA-EMSKTINRNLAAAAQQLGIGMMLGSQRIMLDTALGERAADSFAVRDVAPDVLLF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL V +A+ +GAD L +H NPLQE +Q NG+T+F+ S++ ++ Sbjct: 126 GNIGLSQLA-KTAVPHLVKALDRVGADALAVHTNPLQEAMQHNGDTDFSGSLSRLREAAA 184 Query: 181 AMDVPLLLKEV-GCGLSSMDIELGLKSG---IRYFDIAGRGGTSWSRIESHRDLESDIGI 236 A+D P+LLKEV + EL G + D+AG GGTSWSR+E Sbjct: 185 ALDYPVLLKEVGHGIGGAAAAELVGGEGQPPVAGIDVAGAGGTSWSRVEQFVRYGELRYP 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWG+PT ++ R +ASGG+R G+D K+I LGA + +A P L A++ Sbjct: 245 DLADWGVPTARAIVEVRRLLPGIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPAAIE 304 Query: 297 SSDAVVAAIE 306 SS AVV +E Sbjct: 305 SSAAVVDWLE 314 >gi|134298349|ref|YP_001111845.1| isopentenyl pyrophosphate isomerase [Desulfotomaculum reducens MI-1] gi|134051049|gb|ABO49020.1| isopentenyl-diphosphate delta-isomerase [Desulfotomaculum reducens MI-1] Length = 352 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 124/330 (37%), Positives = 191/330 (57%), Gaps = 20/330 (6%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK++HI + FDD L+H +LP++ + ++D S FLGKKL PLLI++ Sbjct: 4 NRKLEHIQFSLQQKS-RGGATGFDDITLLHNSLPQLDWGDIDTSCYFLGKKLHVPLLINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ ++ E IN NLA AA VA+AVGSQR D++ SF + R+ P V+++N Sbjct: 63 MTGGHREL-ESINGNLAKAAAAAGVALAVGSQRAALEDNSTRYSFSVVREVNPQGVVLAN 121 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA D + +A A+ ++ ADG+ LHLN QE+ G+ F + I LS + Sbjct: 122 LGA-----DCSLLEARTAIKMINADGIQLHLNAPQELAMAEGDRKFKGILENIQSLSRDL 176 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++KEVG G+S I+ + + Y D+ G GGT + IE R + WG Sbjct: 177 DVPVIVKEVGFGMSRESIQRIGAASVPYIDVGGAGGTDFVAIEEARAGRK----TWLKWG 232 Query: 243 IPTPLS----LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 IPT +S L M R + Q IASGG+RN +DI+KS+ LG SL G+A P L+ ++ S Sbjct: 233 IPTAVSLLEGLSMNRA---KTQLIASGGIRNALDIVKSLSLGCSLVGMARPLLRVLVEGS 289 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+ + + + ++ ++ M +LG + +++L Sbjct: 290 SEELNSYLSNIIEDIHRIMLMLGARTLEDL 319 >gi|18312188|ref|NP_558855.1| isopentenyl pyrophosphate isomerase [Pyrobaculum aerophilum str. IM2] gi|20978489|sp|Q8ZYF6|IDI2_PYRAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|18159625|gb|AAL63037.1| conserved protein (possible oxidoreductase) [Pyrobaculum aerophilum str. IM2] Length = 352 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 18/338 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + + +F++ LIH ALPEI EVD + FLG + P I Sbjct: 3 IDKRKDDHIYLASSELS-QIGSAWFEEVVLIHNALPEIDLSEVDLTTRFLGAPVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG ++ +IN LA AAE+ + + VGSQR+ +FE+ +Q APH + Sbjct: 62 GAMTGGT-ELAGKINAELAKAAEEFGIPIYVGSQRIALVKPEVKWTFEVVKQNAPHVPKV 120 Query: 121 SNLGAVQLNYDFGVQKAH----QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +NLGA QL + G ++ QA+ ++ A + +HLN QE++QP G F + K+ Sbjct: 121 ANLGAPQLA-ELGERELEEWVVQAIDMIDAYAIAIHLNAAQEVVQPEGEPRFKGVLEKLK 179 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--- 233 ++ A PL++KE G G+S ++ L D+ G GGTS+ IE R ES Sbjct: 180 IVKRAAGKPLIVKETGNGISK-EVAARLSGIADAIDVGGFGGTSFVAIEGARAKESPLQK 238 Query: 234 -IGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ WGIPT S+ E+ Y IASGG+R+G+D K+I LGA+ ++ P L Sbjct: 239 RLAETYKWWGIPTAASICEVKSAYAG--YLIASGGIRSGLDGAKAIALGANFFTMSQPLL 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 K A+D + I + E +MFL G + VQEL L Sbjct: 297 KAALDGR--LREEIAMIIAELKTAMFLTGARTVQELAL 332 >gi|260663063|ref|ZP_05863956.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus fermentum 28-3-CHN] gi|260552684|gb|EEX25684.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus fermentum 28-3-CHN] Length = 361 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 118/327 (36%), Positives = 183/327 (55%), Gaps = 10/327 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ KD ++ FD LI ALPE++ EV L +P I +M Sbjct: 8 RKNEHLSLAEKDFVLNHQVHPFDQVRLIPNALPEMAVKEVKLKPAGLALPFEWPFYIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ + +N +LA A+K +AMA GS VMF+D A KSF LR+ P L++NL Sbjct: 68 TGGSQRTTA-VNASLARLAKKFNLAMATGSMSVMFNDEAAKKSFAVLREENPDGFLMANL 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA DF +KA Q ++ + AD L +HLNP QE+I G+ F L + +A L S + Sbjct: 127 GA---GADF--KKARQVINFIDADALEIHLNPAQELIMKEGDREFYWLEA-LAGLVSRLH 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+S I + G+R+ ++AG GGT+++RIE R+ E D+ + +WG+ Sbjct: 181 IPVIVKEVGFGMSQQTISQLEQIGVRWINVAGTGGTNFARIEDRRNHELDLSDLV-NWGL 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 TP SL A+ IASGG+ +D++K+ +LGA G+A FL + + + + Sbjct: 240 STPESLLEAQQKSPSTHLIASGGITCPLDVIKAGVLGAKAVGVAGYFLHLLIKEGEEGLA 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYL 329 + + E M L+G + +LYL Sbjct: 300 KELHRWQVELPRLMTLVGVRNWDDLYL 326 >gi|119872601|ref|YP_930608.1| isopentenyl pyrophosphate isomerase [Pyrobaculum islandicum DSM 4184] gi|166226204|sp|A1RTI3|IDI2_PYRIL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119674009|gb|ABL88265.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum islandicum DSM 4184] Length = 354 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 120/336 (35%), Positives = 184/336 (54%), Gaps = 16/336 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + + +FD+ L+H ALPEI EVD + FLG K++ P I Sbjct: 3 IDKRKNDHIYLASSEIS-QVGSPWFDEVILLHNALPEIDLSEVDITTRFLGVKVNAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG ++ +IN LA AE+ + + VGSQRV +FE+ ++ AP + Sbjct: 62 GAMTGGT-ELAGKINAELAKIAEEFGIPIYVGSQRVALMKPEVRWTFEVVKKNAPSVPKV 120 Query: 121 SNLGAVQL---NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL + + + QAV ++ A + +HLN QE+IQP G F + KI + Sbjct: 121 ANLGAPQLAELSDEKLAEWVSQAVDMIDAYAIAIHLNAAQEVIQPEGEPRFRGVFEKIKV 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---- 233 + A P+++KEVG G+S ++ L D+ G GGTS+ IE R ES Sbjct: 181 VRKAAGRPVIVKEVGNGISK-EVASRLVEVADAIDVGGYGGTSFIAIEGARAAESGSSMR 239 Query: 234 --IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + VF+ WGIPT S+ AR IASGG+R+G+D K++ LGA ++ PFL Sbjct: 240 RRVAEVFKSWGIPTAASICEARS-GYRGYIIASGGIRSGLDGAKALALGADFFTMSQPFL 298 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K A++ + IE++ E ++MFL G++ +++L Sbjct: 299 KAALEGR--LREEIETVIAEVKIAMFLTGSRTIEDL 332 >gi|221310205|ref|ZP_03592052.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] gi|221314528|ref|ZP_03596333.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319450|ref|ZP_03600744.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323726|ref|ZP_03605020.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767492|ref|NP_390168.3| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] gi|13878926|sp|P50740|IDI2_BACSU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|33357818|pdb|1P0K|A Chain A, Ipp:dmapp Isomerase Type Ii Apo Structure gi|33357819|pdb|1P0K|B Chain B, Ipp:dmapp Isomerase Type Ii Apo Structure gi|33357820|pdb|1P0N|A Chain A, Ipp:dmapp Isomerase Type Ii, Fmn Complex gi|33357821|pdb|1P0N|B Chain B, Ipp:dmapp Isomerase Type Ii, Fmn Complex gi|12862826|dbj|BAB32625.1| isopentenyl diphosphate isomerase [Bacillus subtilis] gi|49609490|emb|CAG77478.1| isopentenyl diphosphate isomerase, type II [Bacillus subtilis] gi|225185120|emb|CAB14203.2| isopentenyl diphosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] Length = 349 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 111/326 (34%), Positives = 184/326 (56%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I++ Sbjct: 5 ERKRQHINHALSIG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG K+ IN++LA AA + + +AVGSQ D + S+E+ R+ P+ ++ +N Sbjct: 63 MTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S + Sbjct: 123 LGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++G DI G GGT++S+IE+ R + I F WG Sbjct: 178 SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRR-QRQISF-FNSWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I T SL R + IASGGL++ +D+ K+I LGAS G+A FLK DS + + Sbjct: 236 ISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + +E + M +LG + + +L Sbjct: 296 LEEIQLILEELKLIMTVLGARTIADL 321 >gi|253574231|ref|ZP_04851573.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846708|gb|EES74714.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 239 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/226 (41%), Positives = 135/226 (59%), Gaps = 4/226 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++RK +HI + C + ++ F+ + H ALPE+ F E+ FLG L PL Sbjct: 15 TSERKTEHIRL-CLEEQVNAEGILNGFEKYRFRHNALPELDFAEISLKTAFLGASLRTPL 73 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG+ ++ IN LA AAE+ AM VGS R +F +R++AP + Sbjct: 74 LISSMTGGS-RLAGEINARLAEAAERRGWAMGVGSVRAAVERDELAHTFAVRRFAPTIPI 132 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+NLGAVQLNY +G + +AV + GAD L LHLN LQE+ QP G+TNF L +I + Sbjct: 133 IANLGAVQLNYGYGPEDCKRAVEIAGADMLVLHLNSLQEVFQPEGDTNFGGLLRRIEEVC 192 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +P+ +KEVG G+ + ++G+ + D+AG GGTSWS++E Sbjct: 193 RELPIPVGVKEVGWGIDGATAKRLREAGVAFIDVAGAGGTSWSQVE 238 >gi|227510338|ref|ZP_03940387.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189990|gb|EEI70057.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 343 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/321 (33%), Positives = 183/321 (57%), Gaps = 16/321 (4%) Query: 15 KDPGIDRNKKFFDD------WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN 68 KD I +KF+ D +H++LP+ + E+D S + L P I +++GG+ Sbjct: 9 KDEHISLAEKFYQDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPLNLQIPFYIEAISGGS 68 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQ 127 + IN+ LA A+KT +AMAVGSQ V SD + +++F + R+ P +L +N+GA Sbjct: 69 PHTRD-INQKLATIAKKTGLAMAVGSQSVALSDTSLVETFTVAREVNPDGLLFANIGA-- 125 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + V A AV ++ AD L LH+NP QE+I P G+ F L++ I + + VP++ Sbjct: 126 ---NKTVNDARHAVAMIDADALELHVNPAQELIMPEGDRQFNFLTN-IKQIVEGLSVPVI 181 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +KEVG G+S I+ + G+ Y +++G+GGT+++ IE+ R + ++ +DWG+ TP Sbjct: 182 VKEVGFGMSRETIQQLIDLGVGYVNVSGQGGTNFAEIENFRRRDKEMA-YLKDWGLTTPE 240 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 SL +RP+ + +ASGG+++ +DI K + LG+ G+A FL + ++ D V+ IE Sbjct: 241 SLMESRPFQDRLTVLASGGVKSPLDIAKCLALGSHAVGVAGTFLHLVIHENIDEVIRVIE 300 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 + M L +K + EL Sbjct: 301 QWQYGLKTIMMLTNSKNITEL 321 >gi|291484713|dbj|BAI85788.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. natto BEST195] Length = 349 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 111/326 (34%), Positives = 184/326 (56%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I++ Sbjct: 5 ERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG K+ IN++LA AA + + +AVGSQ D + S+E+ R+ P+ ++ +N Sbjct: 63 MTGGGGKLTYEINKSLARAAYQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S + Sbjct: 123 LGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALERIEQICSHV 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++G DI G GGT++S+IE+ R + I F WG Sbjct: 178 SVPVIVKEVGFGMSKESAGKLYEAGAAAVDIGGYGGTNFSKIENLRR-QRKISF-FNSWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I T SL R + IASGGL++ +D+ K+I LGAS G+A FLK DS + + Sbjct: 236 ISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + +E + M +LG + + +L Sbjct: 296 LEEIQLILEELKMIMTVLGARTIDDL 321 >gi|184155671|ref|YP_001844011.1| isopentenyl pyrophosphate isomerase [Lactobacillus fermentum IFO 3956] gi|227514849|ref|ZP_03944898.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum ATCC 14931] gi|183227015|dbj|BAG27531.1| isopentenyl diphosphate delta-isomerase [Lactobacillus fermentum IFO 3956] gi|227086781|gb|EEI22093.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum ATCC 14931] Length = 361 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 183/327 (55%), Gaps = 10/327 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ KD ++ FD LI ALPE++ EV L +P I +M Sbjct: 8 RKNEHLSLAEKDFALNHQVHPFDQVRLIPNALPEMAVKEVKLKPAGLALPFEWPFYIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ + +N +LA A++ +AMA GS VMF+D A +SF LR+ P L++NL Sbjct: 68 TGGSQRTTA-VNASLARLAKQFNLAMATGSMSVMFNDEAAKESFAVLREENPDGFLMANL 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA DF +KA Q ++ + AD L +HLNP QE+I G+ F L + +A L S + Sbjct: 127 GA---GADF--KKARQVINFIDADALEIHLNPAQELIMKEGDREFYWLEA-LAGLVSRLH 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+S I + G+R+ ++AG GGT+++RIE R+ E D+ + +WG+ Sbjct: 181 IPVIVKEVGFGMSQQTISQLEQIGVRWINVAGTGGTNFARIEDRRNHELDLSDLV-NWGL 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 TP SL A+ IASGG+ +D++K+ +LGA G+A FL + + + + Sbjct: 240 STPESLLEAQQKSPSTHLIASGGITCPLDVIKAGVLGAKAVGVAGYFLHLLIKEGEEGLA 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYL 329 + + E M L+G + +LYL Sbjct: 300 KELHRWQVELPRLMTLVGVRNWDDLYL 326 >gi|145590318|ref|YP_001152320.1| isopentenyl pyrophosphate isomerase [Pyrobaculum arsenaticum DSM 13514] gi|166226203|sp|A4WH01|IDI2_PYRAR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145282086|gb|ABP49668.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum arsenaticum DSM 13514] Length = 352 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 121/335 (36%), Positives = 180/335 (53%), Gaps = 16/335 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + D F++ LIH ALPEI F ++D S FLG + P I Sbjct: 3 IDKRKNDHIYLASSDLS-QVGTALFEEVVLIHNALPEIDFSDIDLSTNFLGAPVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG ++ +IN LA AAE+ + M VGSQR+ +FE+ +Q AP I Sbjct: 62 GAMTGGT-ELAGKINAELAKAAEEFGIPMYVGSQRIALVKPEVRWTFEVVKQNAPSIPKI 120 Query: 121 SNLGA---VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL+ V QAV ++ A + +HLN QE++QP G +F + K+ + Sbjct: 121 ANLGAPQLAQLSEKQLVDWVVQAVDMIDAYAVAVHLNAAQEVVQPEGEPSFRGVLEKLKI 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----LESD 233 + A PL++KEVG G+S ++ L D+ G GGTS+ IE R L+ Sbjct: 181 VKRAAGRPLIVKEVGNGISK-EVAAKLAEVADAIDVGGLGGTSFVAIEGARAADAWLQRR 239 Query: 234 IGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + F+ WGIPT S+ E+ Y IASGG+R+G+D +++ LGA ++ P LK Sbjct: 240 VAETFKYWGIPTAASICEVKSVY--RGFVIASGGIRSGLDGARALALGAHFFTMSQPLLK 297 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + IE++ E ++MFL G +R QEL Sbjct: 298 ATLEGR--LREEIEAVITEVKIAMFLTGVRRPQEL 330 >gi|187918540|ref|YP_001884103.1| isopentenyl pyrophosphate isomerase [Borrelia hermsii DAH] gi|119861388|gb|AAX17183.1| isopentenyl-diphosphate delta-isomerase [Borrelia hermsii DAH] Length = 359 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 5/337 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++N++K I I + ++ + +L H AL E+ F E+D S G ++ P+ Sbjct: 12 ILNNKK-RQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESIFGYDIAMPIF 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + ++N++L A ++ M +GS +++F IK F LR+ A + L Sbjct: 71 ISSMTGGIQEG-NKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALRKCADNIPLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SN+GA+QL +FG+ K + + L D + +HLN QE++ G+ NF + IA L Sbjct: 130 SNIGAIQLR-EFGIFKVIEIIKKLEVDAIIVHLNSGQELMNSRGDRNFKGIKDSIARLCD 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A ++P+++KE G G+S + L G+ Y D+AG GGT+W +E ++ ++ F + Sbjct: 189 ASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENLNVASCFSN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSD 299 WGI + L+L + + F ASGG G+DI K I LGA L G+AS L+ D Sbjct: 249 WGISSVLTLLSIKDSFKDRIF-ASGGYETGIDIAKGIALGAKLVGIASAILRAFYAGGED 307 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ ++ +SM L +K + + LN + H Sbjct: 308 ALYKLLKDYEYVLKMSMLLSNSKNLVQFRLNKYFLSH 344 >gi|52786168|ref|YP_091997.1| isopentenyl pyrophosphate isomerase [Bacillus licheniformis ATCC 14580] gi|163119517|ref|YP_079589.2| isopentenyl pyrophosphate isomerase [Bacillus licheniformis ATCC 14580] gi|81609091|sp|Q65I10|IDI2_BACLD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|52348670|gb|AAU41304.1| putative protein [Bacillus licheniformis ATCC 14580] gi|145903024|gb|AAU23951.2| FMN/related compound-binding protein [Bacillus licheniformis ATCC 14580] gi|302311024|gb|ADL14373.1| isopentenyl-diphosphate delta isomerase [Bacillus licheniformis] Length = 349 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 117/326 (35%), Positives = 180/326 (55%), Gaps = 13/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI+ + + DD +H +LPE +VD S + LS P+ I++M Sbjct: 6 RKKEHIDHALSTG--QKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG K INR LA AA +T + +AVGSQ D + S+E+ R+ ++ +NL Sbjct: 64 TGGGGKATFEINRALARAAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ AD L +HLN +QEI+ P G+ NF +I + ++ Sbjct: 124 GS-----EATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGDRNFTGRLRRIEDICRSVS 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WG 242 VP+ +KEVG G+S G++ D+ G GGT++S+IE +L D + F D WG Sbjct: 179 VPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIE---NLRRDKAVEFFDQWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I T SL + IASGG+++ +D+ KSI LGAS G+A FLK S +A+ Sbjct: 236 ISTAASLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEAL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 A IESL ++F M +LG + +++L Sbjct: 296 AAEIESLIEDFKRIMTVLGCRTIEQL 321 >gi|256545618|ref|ZP_05472976.1| isopentenyl diphosphate isomerase [Anaerococcus vaginalis ATCC 51170] gi|256398695|gb|EEU12314.1| isopentenyl diphosphate isomerase [Anaerococcus vaginalis ATCC 51170] Length = 339 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 182/325 (56%), Gaps = 11/325 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI + ++K ++ ++ H AL ++FDE+D S+EF+G K+S P+++++ Sbjct: 7 ERKDEHIENYLRSEF--KSKTLLNNVYVEHNALSNVNFDEIDTSIEFMGNKISMPVMVNA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG ++ E IN +L+ + + MAVGS+ + D ++ +SF L + + + I NL Sbjct: 65 MTGGT-EISEDINEDLSNICRELNIPMAVGSESIAIKDKDSRESFSLLK-DKNVIKIGNL 122 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G ++ ++ A ++GA + HLN QE++ G +F+ +A +S + Sbjct: 123 G-----WENKIENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFSKNFENLANISKNIS 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KEVG G+S + L GI+Y D+AG+GGT++ IE R + D F WGI Sbjct: 178 VPLIVKEVGFGISKEVGQKLLDIGIKYIDVAGKGGTNFIEIEDMRIFDKDYS-EFYSWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT S+ R ++ IASGG+RN D+ KS+I+GA + ++ L + D + Sbjct: 237 PTAKSILDVRSLSDDFFLIASGGIRNSSDVCKSLIIGADMCAISGEVLSFLLRGDYDYAI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ L + + M L+G K ++EL Sbjct: 297 KYLKELNTKIKIFMALVGVKNIEEL 321 >gi|330685389|gb|EGG97047.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU121] Length = 349 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I D+VD + + L +P+ I++M Sbjct: 9 RKNEHVEIAMAQH--DATLSDFDKVRFVHHSIPNIDVDDVDLTTKTSDFNLKYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LAI A +T +AMAVGS + +SF + R+ P V+ SN+ Sbjct: 67 TGGS-EWTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFTIVRETNPDGVIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA +AV +L A L +H+N QE++ P GN FA+ I + +A+D Sbjct: 126 GA-----DVPVDKAVKAVELLDAQALQIHVNSPQELVMPEGNREFANWMENIEAIVNAVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + L G+ Y D++GRGGT++ IE+ R D+ +WG Sbjct: 181 VPVIVKEVGFGMSKETYKSLLNVGVTYVDVSGRGGTNFVDIENERRSNKDMDY-LSNWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + + ++ ASGGLR +D +K + LGA G++ PFL + + Sbjct: 240 STVESLLESSDFQDKLNVFASGGLRTPLDAVKCLALGAKAVGMSRPFLNQVEQAGITQTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K + EL Sbjct: 300 EYVESFLDHMKKIMTMLDAKDINEL 324 >gi|311068804|ref|YP_003973727.1| isopentenyl pyrophosphate isomerase [Bacillus atrophaeus 1942] gi|310869321|gb|ADP32796.1| isopentenyl pyrophosphate isomerase [Bacillus atrophaeus 1942] Length = 349 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 179/327 (54%), Gaps = 13/327 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HI+ + + DD +H +LP+++ ++VD + + S P+ I++ Sbjct: 5 ERKRQHIDHALSTG--QKRETGLDDITFVHVSLPDLALEQVDITTKIGELTSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG + IN++LA AA + +AVGSQ D + S+E+ R+ P ++ +N Sbjct: 63 MTGGGGQHTYEINKSLARAARAADIPLAVGSQMSALKDPSERFSYEIVRKENPDGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + ++A +AV +L AD L +HLN +QEI+ P G+ +F+ +I + + Sbjct: 123 LGS-----EATTEQAKRAVSMLEADALQIHLNVIQEIVMPEGDRSFSGALGRIEQMCKEL 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES-HRDLESDIGIVFQDW 241 +VP+++KEVG G+S +SG DI G GGT++S+IE+ RD + + F W Sbjct: 178 EVPVIVKEVGFGMSKESAARLYESGAAAVDIGGYGGTNFSKIENLRRDKQLNF---FNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 GI T SL ++ IASGGL++ +D+ K+I LGAS G+A FLK D Sbjct: 235 GISTAASLAEITSQFHDKAVIASGGLQHALDVAKAIALGASFAGMAGYFLKALTAKGEDG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ I L +E V M +LG K + EL Sbjct: 295 LIDEIRELLQELKVIMTVLGVKTIPEL 321 >gi|262037194|ref|ZP_06010681.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia goodfellowii F0264] gi|261748793|gb|EEY36145.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia goodfellowii F0264] Length = 335 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 113/327 (34%), Positives = 182/327 (55%), Gaps = 16/327 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K + FDD LIH+++P+ + DE+D S F P I++ Sbjct: 2 NRKDEHIRYALK---YESPYNSFDDMELIHQSVPKFNIDEIDISTRFASNDFECPFFINA 58 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLIS 121 MTGG+ K E INR LA AE+ + GS SD N+ K +++ +L + Sbjct: 59 MTGGSEKGKE-INRKLAKVAEECGILFVTGSYSAALKNSDDNSFKI--VKEENKKLLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA + +Y G++ A+ L L +H+N +QE+I P G+ NF D I Sbjct: 116 NIGADK-DYTAGLK----AIEDLKPLFLQIHVNVMQELIMPEGSKNFKDWRKNIEGFVKN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +PL+LKEVG G+S +++G++SGI+ FDI+GRGGTS++ IE+ R S +W Sbjct: 171 IKIPLILKEVGFGMSEETVKIGMESGIKTFDISGRGGTSFAYIENMRRKNS--LSYLDEW 228 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T SL + Y + + IASGG+RN +DI+KS++LGA G++ L+ A ++ + Sbjct: 229 GQTTVTSLLSVKKYADNIEIIASGGVRNPLDIIKSLVLGAKGVGISGTVLRLAEKNTVEE 288 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + S ++E + M L + ++EL Sbjct: 289 MIEIVNSWKEECKMIMCALNAQNLEEL 315 >gi|296332973|ref|ZP_06875430.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674923|ref|YP_003866595.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149824|gb|EFG90716.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413167|gb|ADM38286.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii str. W23] Length = 349 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/326 (33%), Positives = 184/326 (56%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I++ Sbjct: 5 ERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG ++ IN++LA AA + + +AVGSQ D + S+E+ R+ P+ ++ +N Sbjct: 63 MTGGGGQLTYEINKSLARAARQAGIPLAVGSQMSALKDPSERVSYEIVRKVNPNGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +A +AV ++ AD L +HLN +QEI+ P G+ +F+ +I + S + Sbjct: 123 LGS-----EATADQAKEAVDMIEADALQIHLNVIQEIVMPEGDRSFSGALGRIEQICSQV 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++G DI+G GGT++S+IE+ R + I F WG Sbjct: 178 SVPVIVKEVGFGMSKESAGKLYEAGAAAIDISGYGGTNFSKIENLRR-QRQISF-FNSWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I T SL R + IASGGL++ +D+ ++I LGAS G+A FLK DS + + Sbjct: 236 ISTAASLAEIRSAFPASTMIASGGLQDALDVARAIALGASCTGMAGHFLKALTDSGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + +E + M +LG + + +L Sbjct: 296 LEEIQLILEELKMIMTVLGARTIADL 321 >gi|70725713|ref|YP_252627.1| isopentenyl pyrophosphate isomerase [Staphylococcus haemolyticus JCSC1435] gi|91207077|sp|Q4L8K4|IDI2_STAHJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|68446437|dbj|BAE04021.1| Isopentenyl-diphosphate delta-isomerase [Staphylococcus haemolyticus JCSC1435] Length = 349 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D + FD +H ++P I+ DEVD + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAPQSDFDRVRFVHHSIPSINVDEVDLTSRTTDFDMTYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LA+ A +T +AMAVGS + +SF + RQ P ++ SN+ Sbjct: 67 TGGS-EWTKQINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIARQTNPEGIIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA +AV +L A L +H+N QE++ P GN F+ +A + +D Sbjct: 126 GA-----DVPVDKAVEAVSLLDAQALQIHVNAPQELVMPEGNREFSTWLDNVAAIVQRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G+ Y D++G+GGT++ IE+ R D+ +WG Sbjct: 181 VPVIIKEVGFGMSKELYKDLIDVGVTYVDVSGKGGTNFVTIENERRSNKDMDY-LANWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + Y + ASGG+R +D++KS+ LGA G++ PFL + + Sbjct: 240 STVESLLESSAYQDSLNVFASGGVRTPLDVVKSLALGAKAVGMSRPFLNQVENGGITTTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +ES + M +L + + EL + + H+ Sbjct: 300 EYVESFIEHTKSIMTMLNARDISELKQSKFVFDHK 334 >gi|27468843|ref|NP_765480.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis ATCC 12228] gi|57867838|ref|YP_189495.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis RP62A] gi|251811948|ref|ZP_04826421.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis BCM-HMP0060] gi|282875238|ref|ZP_06284111.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis SK135] gi|293367055|ref|ZP_06613727.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis M23864:W2(grey)] gi|32129625|sp|Q8CRB6|IDI2_STAES RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|71152146|sp|Q5HLP8|IDI2_STAEQ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|27316391|gb|AAO05566.1|AE016750_171 isopentenyl diphosphate isomerase [Staphylococcus epidermidis ATCC 12228] gi|57638496|gb|AAW55284.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis RP62A] gi|251804547|gb|EES57204.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis BCM-HMP0060] gi|281296003|gb|EFA88524.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis SK135] gi|291318785|gb|EFE59159.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733819|gb|EGG70143.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU028] gi|329735085|gb|EGG71381.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU045] Length = 349 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 170/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I +VD + L++P+ I++M Sbjct: 9 RKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ ++IN LAI A +T +AMAVGS + N I++F + R+ P + SN+ Sbjct: 67 TGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPNMIETFSIVRKTNPKGTIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA QAV +L A L +H+N QE++ P GN FA S I + +D Sbjct: 126 GA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIIKEVGFGMSKETLQALYDIGVNYVDVSGRGGTNFVDIENERRSNKDMNYLSQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + + + ASGGLR +D +K + LGA G++ PFL S V Sbjct: 240 STVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITNTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES + M +L ++ L Sbjct: 300 DYVESFIQHMKKIMTMLDAPNIERL 324 >gi|325849560|ref|ZP_08170798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480041|gb|EGC83118.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 338 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 179/327 (54%), Gaps = 16/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + R+K ++ ++ H AL +++FDE+D S+EF+GKK+S P+++++M Sbjct: 8 RKDEHIENYLRSEF--RSKTLLNNIYVEHNALSKVNFDEIDTSIEFMGKKISMPVMVNAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG ++ E IN +L+ + MAVGS+ + D A +SF L + + I NLG Sbjct: 66 TGGT-EISEDINEDLSNICADLNIPMAVGSESIALKDIKARESFSLLKDKNNVFKIGNLG 124 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++ ++ A ++GA + HLN QE++ G +F++ + + + Sbjct: 125 -----FENSLENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFSNNFENLKNIRKNLSA 179 Query: 185 PLLLKEVGCGLSSMDIELG---LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PL++KEVG G+S E+G L G+ Y D+AG+GGT++ IE R + D F W Sbjct: 180 PLIVKEVGFGMSK---EVGKKLLDIGVEYIDVAGKGGTNFIEIEDMRIFDKDYS-EFYSW 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 GIPT S+ R ++ I+SGG+RN D+ KSII+GA + ++ L + D Sbjct: 236 GIPTAKSILDLRSLSDDFFLISSGGIRNATDVCKSIIIGADMCAISGEVLSFLLRGDYDY 295 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +E L+ + + M L+G K ++EL Sbjct: 296 AQKYLEELQTKIKIFMALVGAKNIEEL 322 >gi|229160549|ref|ZP_04288544.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus R309803] gi|228622959|gb|EEK79790.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus R309803] Length = 349 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYALS-TGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D N + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDENEVASYKIIRKINPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + ++A++AV ++ A+ L +HLN +QE+ P G+ +F + +I + + Sbjct: 124 GS-----EATTEQANRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLKSE 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|329115974|ref|ZP_08244691.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parauberis NCFD 2020] gi|326906379|gb|EGE53293.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parauberis NCFD 2020] Length = 331 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 171/329 (51%), Gaps = 17/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + + FD+ LIH +LP +VD S F + FP I Sbjct: 1 MTNRKNDHIKYALK---YESDYNSFDEIELIHSSLPSFDLKDVDLSTHFADQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA AE T + M GS ++ SF+LRQ AP +L + Sbjct: 58 NAMTGGSEKG-KAVNEKLARVAEATGIPMVTGSYSPALNNPQVKSSFQLRQVAPKMLLAT 116 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFL--HLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+G + + D G+Q V D +FL H+N +QE++ P G F + S + Sbjct: 117 NIG-LDKSVDLGLQT------VADMDPIFLQIHINLMQELLMPEGERTFKNWESNLKDYV 169 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPL+LKEVG G+ IE GI+ FDI+GRGGTS++ IE+ R + Sbjct: 170 EQIKVPLVLKEVGFGMDRKTIERARDIGIKTFDISGRGGTSFAYIENQR---GEGRSYLN 226 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 +WG T +L + NE + +ASGG+RN +DI+KS+ILGA G++ L Sbjct: 227 NWGQSTVQTLLNIQDMSNEVEILASGGVRNPLDIVKSLILGARAVGMSRTMLSLVERYPE 286 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+A + +++ + M L K V +L Sbjct: 287 EKVIAIVNGWKEDLAIIMCALNCKTVADL 315 >gi|296171200|ref|ZP_06852627.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894266|gb|EFG74022.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 366 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/335 (35%), Positives = 174/335 (51%), Gaps = 12/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK HI+ VC ++ D + L + AL + S ++D S +F G +L P+ Sbjct: 26 MTTRKRRHID-VCLGEQVNYEHLSTGLDRYQLPYNALTQTSLGDIDLSTQFFGVRLRSPV 84 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPH 116 LI +MTGG ++ IN+NLA AA++ V M +GSQR+M A SF +R AP Sbjct: 85 LIGAMTGGA-QLSGTINKNLAAAAQELGVGMMLGSQRIMLDSALGEQAAASFTVRDVAPD 143 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +L N+G QL V +A+ +GAD L +H NPLQE IQ NG+T+F+ ++ Sbjct: 144 VLLFGNIGLAQLTR-AAVPDLAKALDRVGADALAVHTNPLQEAIQRNGDTDFSGSLGRLR 202 Query: 177 LLSSAMDVPLLLKEV-GCGLSSMDIELGLKSG---IRYFDIAGRGGTSWSRIESHRDLES 232 ++ A++ P+LLKEV + EL G + D+AG GGTSWSR+E Sbjct: 203 EVADAIECPVLLKEVGHGIGGAAAAELVGAEGELPVSGIDVAGAGGTSWSRVEQFVRYGE 262 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 DWGIPT ++ R +ASGG+R G+D K+I LGA + +A P L Sbjct: 263 LRYPHLADWGIPTARAIVEVREVLPGIPLVASGGIRTGMDAAKAIALGADVVAVARPLLP 322 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++S+ AVV ++ E V + G + L Sbjct: 323 AAIESAAAVVDWLQPFIDELRVCLHGCGVTNLAGL 357 >gi|262281878|ref|ZP_06059647.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. 2_1_36FAA] gi|262262332|gb|EEY81029.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. 2_1_36FAA] Length = 334 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 173/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + + N FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 1 MSQNRKDDHIKYALEQR-LGYNS--FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 INAMTGGSHKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-SSYRVAAGRPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYSQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 171 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL +P C+E + +ASGG+R+ +D++K+++LGA GL+ L + S + Sbjct: 228 WGQSTLQSLLALQPLCDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A +E + + + M L + +QEL Sbjct: 288 EVIAIVEGWKSDLRLIMCALSCRNLQEL 315 >gi|15925336|ref|NP_372870.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|15927926|ref|NP_375459.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus N315] gi|156980661|ref|YP_001442920.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu3] gi|255007122|ref|ZP_05145723.2| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|54037386|sp|P99172|IDI2_STAAN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54041381|sp|P65102|IDI2_STAAM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|166226209|sp|A7X5W0|IDI2_STAA1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|13702297|dbj|BAB43438.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus N315] gi|14248120|dbj|BAB58508.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|156722796|dbj|BAF79213.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus Mu3] Length = 349 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 176/325 (54%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T++AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETRLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|332358636|gb|EGJ36460.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1056] Length = 335 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 174/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+++ P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-SSYQVAAGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRAMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +ES + + + M L + +QEL Sbjct: 288 EEVIDIVESWKSDLRLIMCALSCRNLQEL 316 >gi|242243849|ref|ZP_04798293.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis W23144] gi|242232693|gb|EES35005.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis W23144] gi|319401642|gb|EFV89851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis FRI909] Length = 349 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 167/312 (53%), Gaps = 15/312 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I +VD + L++P+ I++M Sbjct: 9 RKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ ++IN LAI A +T +AMAVGS + N I++F + R+ P + SN+ Sbjct: 67 TGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPNMIETFSIVRKTNPKGTIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA QAV +L A L +H+N QE++ P GN FA S I + +D Sbjct: 126 GA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIIKEVGFGMSKETLQALHDIGVNYVDVSGRGGTNFVDIENERRSNKDMNYLSQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS----- 298 T SL + + + ASGGLR +D +K + LGA G++ PFL S Sbjct: 240 STVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITNTI 299 Query: 299 DAVVAAIESLRK 310 D V + I+ ++K Sbjct: 300 DYVESFIQHMKK 311 >gi|269941931|emb|CBI50342.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TW20] Length = 349 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 176/325 (54%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D++KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDVIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|297584435|ref|YP_003700215.1| isopentenyl-diphosphate delta-isomerase [Bacillus selenitireducens MLS10] gi|297142892|gb|ADH99649.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus selenitireducens MLS10] Length = 352 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/328 (32%), Positives = 178/328 (54%), Gaps = 17/328 (5%) Query: 5 RKIDHIN--IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKIDHI + + P + DD +H ALP ++ D++ S P+ I+ Sbjct: 6 RKIDHIEHALSMESPRLSS----MDDIAFVHNALPGLNVDDISLESSIGELNFSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG K E+INR LA A + MAVGSQ D +S+++ RQY P ++ + Sbjct: 62 AMTGGGGKETEKINRQLAQVANVFNIPMAVGSQMAAIRDRKEQQSYKVVRQYHPRGLVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G+ + V +A V +L AD + +HLN +QE++ P G+ F +I++++ Sbjct: 122 NVGS-----EATVDQAKFCVDLLEADAIQIHLNVIQELVMPEGDRAFRGALERISMIAEE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH-RDLESDIGIVFQD 240 ++VP+++KEVG G+S ++ K+G+ D+ GRGGT++S IE+ RD D F++ Sbjct: 177 LNVPVIVKEVGFGISLEAAKMLSKAGVAAIDVGGRGGTNFSWIENQRRDTPYDF---FEN 233 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WGIPT ++ + + +++GG++ +D+ KS+ LGA+ G+A LK D D Sbjct: 234 WGIPTAAAIVESSSVAGKLPVLSTGGIQTSMDVAKSVALGANAAGMAGQVLKWLRTDGLD 293 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + ++ L E M LG + V +L Sbjct: 294 KTIQHMDQLMIELKTIMTALGAQSVHDL 321 >gi|119719190|ref|YP_919685.1| isopentenyl pyrophosphate isomerase [Thermofilum pendens Hrk 5] gi|119524310|gb|ABL77682.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermofilum pendens Hrk 5] Length = 361 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 108/309 (34%), Positives = 174/309 (56%), Gaps = 15/309 (4%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 +H+ + E +F +VD S +FLG +++ P++IS MTG M ++N LA A++ KV Sbjct: 35 RFVHQTVLEANFSDVDVSTKFLGYEVAAPIVISGMTG-GTPMGGKVNAMLAEVAQRLKVP 93 Query: 90 MAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 + VGSQR D A+++F + R+ AP +I+N+GA Q++ + + + ++GAD Sbjct: 94 IGVGSQRAALKDRAAVETFRVVREKAPDVPVIANIGASQVSMGLSAGEVQELLDMVGADA 153 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK--- 205 L +HLNPLQE++QP G +F + + + ++ VP++LK+ G G S E LK Sbjct: 154 LAVHLNPLQEVLQPEGEPSFKNFLGNLREIVKSVKVPVILKQTGEGFSR---ESALKIAD 210 Query: 206 SGIRYFDIAGRGGTSWSRIESHR------DLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +G++ D+ G GGTS++ IE R DL +I F WGIPT S+ R + Sbjct: 211 TGVKGVDVGGAGGTSFAVIEGLRARYAGLDLHEEIAFEFAGWGIPTAASVLEVRSALPDI 270 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFL 318 IA+GG+R+G+D K I LGA GLA P LK + +E + +E +++FL Sbjct: 271 LLIATGGIRSGLDAAKVIRLGADFAGLALPVLKEVYYRGVEGGYRFLEKVIRELKIAVFL 330 Query: 319 LGTKRVQEL 327 G + + +L Sbjct: 331 TGGRTLADL 339 >gi|205373821|ref|ZP_03226623.1| isopentenyl pyrophosphate isomerase [Bacillus coahuilensis m4-4] Length = 352 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 13/305 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F D +H++LP S D+++ + +S P+ I++MTGG + +INRNL A+ Sbjct: 25 FSDISFVHQSLPNTSLDDINIHTKIGELFISSPIYINAMTGGGGEHTLQINRNLTEVAKH 84 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +AVGSQ D K+FE+ R+Y P+ ++ NLG+ + V +A AV ++ Sbjct: 85 AGIPIAVGSQMAAIKDAEEKKTFEIVRKYNPNGIVFGNLGS-----EATVDQAKAAVDMI 139 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN LQE+ P G+ +F +I + ++DVP+++KE G G+S EL Sbjct: 140 EADALQIHLNVLQELTMPEGDRSFVGALHRIENIVQSIDVPVIVKETGYGISKETAELLR 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 +GI D+ G GGT++S IE+ R S F++WGIPT S+ E A+ ++ Sbjct: 200 GTGISAIDVGGFGGTNFSSIENARRNRSL--PFFENWGIPTAASIVEAAQ---QSIPVLS 254 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTK 322 SGG+R+ ILKS++LGA GL+ FLK MD A++ I + E + M LG Sbjct: 255 SGGIRDSESILKSLVLGAKAVGLSGFFLKILMDDGQTALLEEISCMLDELKMMMCALGAN 314 Query: 323 RVQEL 327 +VQEL Sbjct: 315 QVQEL 319 >gi|227513346|ref|ZP_03943395.1| isopentenyl pyrophosphate isomerase [Lactobacillus buchneri ATCC 11577] gi|227083219|gb|EEI18531.1| isopentenyl pyrophosphate isomerase [Lactobacillus buchneri ATCC 11577] Length = 343 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 108/321 (33%), Positives = 179/321 (55%), Gaps = 16/321 (4%) Query: 15 KDPGIDRNKKFFDD------WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN 68 KD I +KF+ D +H++LP+ + E+D S + L P I +++GG+ Sbjct: 9 KDEHISLAEKFYQDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPINLQIPFYIEAISGGS 68 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQ 127 + IN+ LA A+KT +AMAVGSQ V D + +++F + R+ P +L +N+GA Sbjct: 69 -PHTKDINQKLATIAKKTGLAMAVGSQSVALGDASLVETFTVAREVNPDGLLFANIGA-- 125 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 D V A AV ++ AD L LH+NP QE+I P G+ F L++ I + + VP++ Sbjct: 126 ---DKTVDDARHAVAMIDADALELHVNPAQELIMPEGDRQFNFLTN-IKQIVEGLSVPVI 181 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +KEVG G+S I+ G+ Y +++G GGT+++ IE+ R + ++ ++WG+ TP Sbjct: 182 VKEVGFGMSRETIQQLADLGVGYVNVSGHGGTNFAEIENFRRRDKEMA-YLKNWGLTTPE 240 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 SL +RP+ + +ASGG+++ DI K + LG+ G+A FL + ++ D V+ IE Sbjct: 241 SLMESRPFQDRLTVLASGGIKSPSDIAKCLALGSHAVGVAGTFLHLVIHENIDEVIRVIE 300 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 + M L +K + EL Sbjct: 301 QWQYGLKTIMMLTNSKNITEL 321 >gi|228938710|ref|ZP_04101314.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971592|ref|ZP_04132215.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978202|ref|ZP_04138579.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis Bt407] gi|228781219|gb|EEM29420.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis Bt407] gi|228788115|gb|EEM36071.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820951|gb|EEM66972.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939216|gb|AEA15112.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 349 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D N S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDENEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 IPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|167396281|ref|XP_001741990.1| isopentenyl-diphosphate delta-isomerase [Entamoeba dispar SAW760] gi|165893186|gb|EDR21526.1| isopentenyl-diphosphate delta-isomerase, putative [Entamoeba dispar SAW760] Length = 371 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/333 (33%), Positives = 184/333 (55%), Gaps = 15/333 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DH+ + +D L P+ S + F K+LS PL+I +M Sbjct: 20 RKLDHLKFCRNNDTQSHQSTHLEDVILEKTCFPKQSLSSIQTQTNFFNKELSIPLIIGAM 79 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFEL-RQYAPHTVLIS 121 TGG+N ++ +N+ LAIAA +T VA+ VGSQR H+ ++S+ + R+ AP+ +I Sbjct: 80 TGGSND-VKLVNKTLAIAANETNVAIGVGSQRSGLESHDEELLESYRVVRECAPNAFIIG 138 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G+VQL ++G + + ++ + + +HLN QE++Q G+ + D+ ++ + S Sbjct: 139 NIGSVQLT-EYG-EVLDDLISMIKGNAIAVHLNWEQELVQTEGDRSGTDVP-RLKEIISK 195 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------IG 235 + ++ K+VG G+ D+ + + G++ DIAG GGTS++ +E R E +G Sbjct: 196 WNGTVIGKQVGHGMMKKDVMICQELGMKAVDIAGIGGTSFAGVECLRAQEKKQYQQNRLG 255 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + D+G+PT +S+ A C+ IASGG+RNG DI+KS+ LGASL + PF+ Sbjct: 256 QLLWDFGVPTAMSIWEASQ-CS-LPIIASGGIRNGFDIVKSMTLGASLASITKPFVSLYS 313 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + S+A V I S++ E +FL G V E + Sbjct: 314 EGSEACVKYINSIKNEIQSLLFLCGCPSVNEAH 346 >gi|329726554|gb|EGG63017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU144] Length = 349 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 170/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I +VD + L++P+ I++M Sbjct: 9 RKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ ++IN LAI A +T +AMAVGS + + I++F + R+ P + SN+ Sbjct: 67 TGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPDMIETFSIVRKTNPKGTIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA QAV +L A L +H+N QE++ P GN FA S I + +D Sbjct: 126 GA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIIKEVGFGMSKETLQALYDIGVNYVDVSGRGGTNFVDIENERRSNKDMNYLSQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + + + ASGGLR +D +K + LGA G++ PFL S V Sbjct: 240 STVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITNTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES + M +L ++ L Sbjct: 300 DYVESFIQHMKKIMTMLDAPNIERL 324 >gi|227524489|ref|ZP_03954538.1| isopentenyl pyrophosphate isomerase [Lactobacillus hilgardii ATCC 8290] gi|227088359|gb|EEI23671.1| isopentenyl pyrophosphate isomerase [Lactobacillus hilgardii ATCC 8290] Length = 343 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/321 (33%), Positives = 178/321 (55%), Gaps = 16/321 (4%) Query: 15 KDPGIDRNKKFFDD------WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN 68 KD I +KF+ D +H++LP+ + E+D S + L P I +++GG+ Sbjct: 9 KDEHISLAEKFYQDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPINLQIPFYIEAISGGS 68 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQ 127 + IN+ LA A+KT +AMAVGSQ V D + +++F + R+ P +L +N+GA Sbjct: 69 PHT-KDINQKLATIAKKTGLAMAVGSQSVALGDASLVETFTVAREVNPDGLLFANIGA-- 125 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 D V A AV ++ AD L LH+NP QE+I P G+ F L++ I + + VP++ Sbjct: 126 ---DKTVDDARHAVAMIDADALELHVNPAQELIMPEGDRQFNFLTN-IKQIVEGLSVPVI 181 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +KEVG G+S I+ G+ Y +++G GGT ++ IE+ R + ++ ++WG+ TP Sbjct: 182 VKEVGFGMSRETIQQLADLGVGYVNVSGHGGTDFAEIENFRRRDKEMA-YLKNWGLTTPE 240 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 SL +RP+ + +ASGG+++ DI K + LG+ G+A FL + ++ D V+ IE Sbjct: 241 SLMESRPFQDRLTVLASGGIKSPSDIAKCLALGSHAVGVAGTFLHLVIHENIDEVIRVIE 300 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 + M L +K + EL Sbjct: 301 QWQYGLKTIMMLTNSKNITEL 321 >gi|258423721|ref|ZP_05686608.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9635] gi|257846113|gb|EEV70140.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9635] Length = 349 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 107/326 (32%), Positives = 179/326 (54%), Gaps = 13/326 (3%) Query: 5 RKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+ I + + +D + FD +H ++P I+ +++D + + +++P+ I++ Sbjct: 9 RKNEHVEIAMAQSDAMDSD---FDKMRFVHHSIPSINVNDIDLTSQTSDLTMAYPVYINA 65 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN Sbjct: 66 MTGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSN 124 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 125 VGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRV 179 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 180 SVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWG 238 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-V 301 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 239 QSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHT 298 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 VA +ES + M +L K + +L Sbjct: 299 VAYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|228932884|ref|ZP_04095751.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826805|gb|EEM72572.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 349 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|239635940|ref|ZP_04676958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus warneri L37603] gi|239598479|gb|EEQ80958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus warneri L37603] Length = 349 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I D+VD + + + +P+ I++M Sbjct: 9 RKNEHVEIAMAQH--DATLSDFDKVRFVHHSIPNIDVDDVDLTTKTSEFNMKYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LAI A +T +AMAVGS + +SF + R+ P V+ SN+ Sbjct: 67 TGGS-EWTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFTIVRETNPDGVIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA +AV +L A L +H+N QE++ P GN FA+ I + A++ Sbjct: 126 GA-----DVPVDKAVKAVELLDAQALQIHVNSPQELVMPEGNREFANWMENIEAIVKAVN 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + L G+ Y D++GRGGT++ IE+ R D+ +WG Sbjct: 181 VPVIVKEVGFGMSKETYKSLLNVGVTYVDVSGRGGTNFVDIENERRSNKDMDY-LSNWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + + ++ ASGGLR +D +K + LGA G++ PFL + + Sbjct: 240 STVESLLESSDFQDKLNVFASGGLRTPLDAVKCLALGAKAVGMSRPFLNQVEQAGITQTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K + EL Sbjct: 300 EYVESFLDHMKKIMTMLDAKDINEL 324 >gi|229096090|ref|ZP_04227063.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-29] gi|229115046|ref|ZP_04244456.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-3] gi|228668186|gb|EEL23618.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-3] gi|228687050|gb|EEL40955.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-29] Length = 349 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDEREAASYKVVRKINPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 IPVIVKEVGFGMSKETVQQLVSIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 GEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|228920309|ref|ZP_04083656.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839332|gb|EEM84626.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 349 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEVASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPIIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|242371998|ref|ZP_04817572.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis M23864:W1] gi|242350267|gb|EES41868.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis M23864:W1] Length = 349 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D + FD +H ++P I ++VD + + FP+ I++M Sbjct: 9 RKNEHVEIAMSQ--TDAPQSDFDKLRFVHHSIPNIDVNQVDLTSHTSHFDMQFPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LAI A +T +AMAVGS + +SF + RQ P ++ SN+ Sbjct: 67 TGGS-EWTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFSIARQINPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA QAV +L A L +H+N QE++ P GN F+ + + ++ Sbjct: 126 GA-----DVPVEKAVQAVDLLEAQALQVHVNSPQELVMPEGNREFSTWMDNLESIVKRVN 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + ++ G++Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIVKEVGFGMSKETFKSLVEIGVQYVDVSGRGGTNFIDIENERRTNKDMNYLTQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL + + Sbjct: 240 STVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQTGITNTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K ++ L Sbjct: 300 EYVESFLDHMKKIMTMLDAKDIEAL 324 >gi|13878549|sp|P58052|IDI2_STAAU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|12539425|dbj|BAB21468.1| isopentenyl diphosphate isomerase [Staphylococcus aureus] Length = 349 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMTYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|148268783|ref|YP_001247726.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus JH9] gi|150394853|ref|YP_001317528.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus JH1] gi|253314686|ref|ZP_04837899.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|257794688|ref|ZP_05643667.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9781] gi|258408708|ref|ZP_05680992.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9763] gi|258422304|ref|ZP_05685216.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9719] gi|258439696|ref|ZP_05690442.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9299] gi|258442747|ref|ZP_05691307.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8115] gi|258446553|ref|ZP_05694708.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6300] gi|258450330|ref|ZP_05698422.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6224] gi|258455294|ref|ZP_05703254.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A5937] gi|269203977|ref|YP_003283246.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus ED98] gi|282893790|ref|ZP_06302022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A8117] gi|282926898|ref|ZP_06334525.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A10102] gi|295405032|ref|ZP_06814845.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8819] gi|296275432|ref|ZP_06857939.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MR1] gi|297244089|ref|ZP_06927979.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8796] gi|189044243|sp|A6U473|IDI2_STAA2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044244|sp|A5IVC7|IDI2_STAA9 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|147741852|gb|ABQ50150.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus JH9] gi|149947305|gb|ABR53241.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus JH1] gi|257788660|gb|EEV27000.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9781] gi|257840391|gb|EEV64851.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9763] gi|257841735|gb|EEV66172.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9719] gi|257847472|gb|EEV71474.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9299] gi|257851868|gb|EEV75802.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8115] gi|257854621|gb|EEV77569.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6300] gi|257856422|gb|EEV79331.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6224] gi|257862505|gb|EEV85273.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A5937] gi|262076267|gb|ACY12240.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus ED98] gi|282591349|gb|EFB96422.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A10102] gi|282763848|gb|EFC03976.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A8117] gi|285818009|gb|ADC38496.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus aureus 04-02981] gi|294969977|gb|EFG45995.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8819] gi|297178867|gb|EFH38112.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8796] gi|312830693|emb|CBX35535.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128734|gb|EFT84735.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS03] gi|329723556|gb|EGG60085.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21172] Length = 349 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPIYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|196033589|ref|ZP_03101001.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus W] gi|218902710|ref|YP_002450544.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH820] gi|228926629|ref|ZP_04089698.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121141|ref|ZP_04250378.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 95/8201] gi|226707312|sp|B7JGY4|IDI2_BACC0 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|195994023|gb|EDX57979.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus W] gi|218535057|gb|ACK87455.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH820] gi|228662260|gb|EEL17863.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 95/8201] gi|228833005|gb|EEM78573.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 349 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IEFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|49484561|ref|YP_041785.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257423828|ref|ZP_05600257.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257426510|ref|ZP_05602912.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429147|ref|ZP_05605534.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus 68-397] gi|257431793|ref|ZP_05608156.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus E1410] gi|257434753|ref|ZP_05610804.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M876] gi|282902256|ref|ZP_06310149.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C160] gi|282906686|ref|ZP_06314534.1| isopentenyl-diphosphate delta-isomerase type 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909663|ref|ZP_06317472.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911908|ref|ZP_06319704.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915203|ref|ZP_06322980.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M899] gi|282920927|ref|ZP_06328645.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C427] gi|282925833|ref|ZP_06333481.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C101] gi|283959126|ref|ZP_06376567.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293497601|ref|ZP_06665455.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293511178|ref|ZP_06669875.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M809] gi|293549787|ref|ZP_06672459.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M1015] gi|295428926|ref|ZP_06821550.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589580|ref|ZP_06948221.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MN8] gi|56749002|sp|Q6GE88|IDI2_STAAR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|49242690|emb|CAG41413.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272846|gb|EEV04948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257276141|gb|EEV07592.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279628|gb|EEV10215.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus 68-397] gi|257282672|gb|EEV12804.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus E1410] gi|257285349|gb|EEV15465.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M876] gi|282312662|gb|EFB43066.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C101] gi|282315342|gb|EFB45726.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C427] gi|282320924|gb|EFB51258.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M899] gi|282323604|gb|EFB53920.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326237|gb|EFB56541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329585|gb|EFB59106.1| isopentenyl-diphosphate delta-isomerase type 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282596715|gb|EFC01674.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C160] gi|283471567|emb|CAQ50778.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus ST398] gi|283788718|gb|EFC27545.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290918834|gb|EFD95910.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M1015] gi|291096532|gb|EFE26790.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291466165|gb|EFF08694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M809] gi|295127275|gb|EFG56917.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297578091|gb|EFH96804.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MN8] gi|312437239|gb|ADQ76310.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH60] gi|315193609|gb|EFU24005.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS00] Length = 349 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMTYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|157151022|ref|YP_001449561.1| isopentenyl pyrophosphate isomerase [Streptococcus gordonii str. Challis substr. CH1] gi|189044246|sp|A8AUV1|IDI2_STRGC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157075816|gb|ABV10499.1| FMN-dependent dehydrogenase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 334 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 1 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 56 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+++ P+ +L Sbjct: 57 YINAMTGGSQKG-SQINEKLAQVAESCGLLFVTGSYSAALKNPSDT-SYQVATGRPNLLL 114 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 115 ATNIG-----LDKPYQAAQQAVADLQPLFLQIHVNLMQELLMPEGEREFRSWRQHLTDYS 169 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 170 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 226 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L + S Sbjct: 227 DWGQSTLQSLLALQPMRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRAMLDLVKNYSV 286 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 287 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 315 >gi|212695996|ref|ZP_03304124.1| hypothetical protein ANHYDRO_00532 [Anaerococcus hydrogenalis DSM 7454] gi|212676983|gb|EEB36590.1| hypothetical protein ANHYDRO_00532 [Anaerococcus hydrogenalis DSM 7454] Length = 338 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 20/329 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + R+K ++ ++ H AL +I+FDE+D S+EF+G+K+S P+++++M Sbjct: 8 RKDEHIENYLRSEF--RSKTLLNNIYVEHNALSKINFDEIDTSIEFMGRKISMPVMVNAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG ++ E IN +L+ + MAVGS+ + D A +SF L + + I NLG Sbjct: 66 TGGT-EISEDINEDLSNICADLNIPMAVGSESIALKDIKARESFSLLKDKNNVFKIGNLG 124 Query: 125 AVQL--NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 N++F A ++GA + HLN QE++ G +F + + + + Sbjct: 125 LENSLENFEF-------AKDLIGASAMQAHLNIAQELVMDEGERDFLNNFENLKNIRKNL 177 Query: 183 DVPLLLKEVGCGLSSMDIELG---LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 PL++KEVG G+S E+G L GI Y D+AG+GGT++ IE R + D F Sbjct: 178 SAPLIVKEVGFGMSK---EVGKKLLDIGIEYIDVAGKGGTNFIEIEDMRIFDKDYS-EFY 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WGIPT S+ R ++ I+SGG+RN D+ KSII+GA + ++ L + Sbjct: 234 SWGIPTAKSILDLRSLSDDFFLISSGGIRNATDVCKSIIIGADMCAISGEVLSFLLRGDY 293 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D +E L+ + + M L+G K ++EL Sbjct: 294 DYAQKYLEELQTKIKIFMALVGAKNIEEL 322 >gi|229010904|ref|ZP_04168100.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides DSM 2048] gi|229166442|ref|ZP_04294198.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH621] gi|228617016|gb|EEK74085.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH621] gi|228750304|gb|EEM00134.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides DSM 2048] Length = 349 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVVRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGVENLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGVKTIEEL 321 >gi|226312031|ref|YP_002771925.1| isopentenyl pyrophosphate isomerase [Brevibacillus brevis NBRC 100599] gi|226094979|dbj|BAH43421.1| probable isopentenyl-diphosphate delta-isomerase [Brevibacillus brevis NBRC 100599] Length = 350 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 106/321 (33%), Positives = 182/321 (56%), Gaps = 13/321 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI ++ FDD + +LP + E +LS P++I++M Sbjct: 7 RKLDHIRNALIT--LENGANSFDDVSFVPNSLPNAALAETSLDTVIASLRLSSPIMINAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN+ LAI A + +AMAVGSQ D + S+ + R+ P +L +N+ Sbjct: 65 TGGAGGTTQ-INQKLAIIARERNLAMAVGSQMAALRDPDVTDSYLIVRREHPQGILFANV 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA + V++A AV ++ A+GL +HLN +QE++ P G+ +F +I + ++D Sbjct: 124 GA-----EATVEQAIAAVEMMQANGLQIHLNVMQELLMPEGDRDFRGYLERIQAIRESLD 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ IE ++ GIR D+ GRGGT+++++E+ R+ + + +F+DWG Sbjct: 179 VPVIVKEVGFGMAKESIEKLIEIGIRTIDVGGRGGTNFAQVENMRNDQPN--AMFEDWGF 236 Query: 244 PTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +IA+GG+R+G+D++K+ LGAS G+A L+ +S + Sbjct: 237 TTVESLLEANAVGHPGVSYIATGGVRHGLDVVKAASLGASAVGMAGAMLRLVQRESLEDC 296 Query: 302 VAAIESLRKEFIVSMFLLGTK 322 ++ ++ + V+M LG K Sbjct: 297 LSTVDRWHHQIRVAMTALGMK 317 >gi|30261594|ref|NP_843971.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Ames] gi|47526794|ref|YP_018143.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184426|ref|YP_027678.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Sterne] gi|65318865|ref|ZP_00391824.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Bacillus anthracis str. A2012] gi|165869327|ref|ZP_02213986.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0488] gi|167633178|ref|ZP_02391503.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0442] gi|167639050|ref|ZP_02397323.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0193] gi|170686131|ref|ZP_02877353.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0465] gi|170706579|ref|ZP_02897039.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0389] gi|177650567|ref|ZP_02933534.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0174] gi|190568619|ref|ZP_03021524.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis Tsiankovskii-I] gi|227815654|ref|YP_002815663.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. CDC 684] gi|229603754|ref|YP_002866002.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0248] gi|254683086|ref|ZP_05146947.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. CNEVA-9066] gi|254723674|ref|ZP_05185460.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. A1055] gi|254733535|ref|ZP_05191256.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Western North America USA6153] gi|254740846|ref|ZP_05198534.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Kruger B] gi|254755084|ref|ZP_05207118.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Vollum] gi|254759621|ref|ZP_05211645.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Australia 94] gi|81582874|sp|Q81SX4|IDI2_BACAN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803421|sp|C3P586|IDI2_BACAA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803422|sp|C3L9F9|IDI2_BACAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|30255448|gb|AAP25457.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Ames] gi|47501942|gb|AAT30618.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178353|gb|AAT53729.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Sterne] gi|164714767|gb|EDR20285.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0488] gi|167512840|gb|EDR88213.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0193] gi|167531216|gb|EDR93894.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0442] gi|170128677|gb|EDS97544.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0389] gi|170669828|gb|EDT20569.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0465] gi|172083711|gb|EDT68771.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0174] gi|190560219|gb|EDV14199.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis Tsiankovskii-I] gi|227002477|gb|ACP12220.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. CDC 684] gi|229268162|gb|ACQ49799.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0248] Length = 349 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IEFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEEIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|57650889|ref|YP_187147.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus COL] gi|87160251|ref|YP_494927.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196264|ref|YP_501084.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222459|ref|YP_001333281.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|161510539|ref|YP_001576198.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141279|ref|ZP_03565772.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253730016|ref|ZP_04864181.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734240|ref|ZP_04868405.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus TCH130] gi|258452767|ref|ZP_05700763.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A5948] gi|262049807|ref|ZP_06022671.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus D30] gi|262052113|ref|ZP_06024322.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus 930918-3] gi|282925234|ref|ZP_06332893.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9765] gi|284025369|ref|ZP_06379767.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus 132] gi|294848887|ref|ZP_06789632.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9754] gi|304379537|ref|ZP_07362271.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|71152145|sp|Q5HDL0|IDI2_STAAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|122538789|sp|Q2FVR9|IDI2_STAA8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|123484672|sp|Q2FEF1|IDI2_STAA3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|172049061|sp|A6QJI7|IDI2_STAAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044245|sp|A8Z536|IDI2_STAAT RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|57285075|gb|AAW37169.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus COL] gi|87126225|gb|ABD20739.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203822|gb|ABD31632.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150375259|dbj|BAF68519.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|160369348|gb|ABX30319.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726229|gb|EES94958.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727935|gb|EES96664.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus TCH130] gi|257859530|gb|EEV82382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A5948] gi|259160014|gb|EEW45049.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus 930918-3] gi|259162114|gb|EEW46692.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus D30] gi|282592635|gb|EFB97644.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9765] gi|294824266|gb|EFG40690.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9754] gi|302752217|gb|ADL66394.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341882|gb|EFM07787.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198111|gb|EFU28442.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS01] gi|320140113|gb|EFW31972.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143383|gb|EFW35164.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus MRSA177] gi|329315033|gb|AEB89446.1| Isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus T0131] gi|329726070|gb|EGG62543.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21189] Length = 349 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|282917697|ref|ZP_06325448.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus D139] gi|283767435|ref|ZP_06340350.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus H19] gi|282318452|gb|EFB48811.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus D139] gi|283461314|gb|EFC08398.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus H19] gi|298695607|gb|ADI98829.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ED133] gi|302333979|gb|ADL24172.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus JKD6159] gi|323439971|gb|EGA97686.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus O11] gi|323443694|gb|EGB01307.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus O46] Length = 349 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|327468606|gb|EGF14085.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK330] Length = 335 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 173/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG++K +IN LA AE + GS + + S+++ P+ +L Sbjct: 58 YINAMTGGSHKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYQVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPYQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDIPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|21283996|ref|NP_647084.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MW2] gi|49487129|ref|YP_044350.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|297209838|ref|ZP_06926234.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910849|ref|ZP_07128299.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH70] gi|24211788|sp|Q8NV55|IDI2_STAAW RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|56748949|sp|Q6G6X4|IDI2_STAAS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|21205439|dbj|BAB96132.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus MW2] gi|49245572|emb|CAG44050.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|296885511|gb|EFH24448.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887829|gb|EFK83024.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH70] Length = 349 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMYSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|30019647|ref|NP_831278.1| isopentenyl pyrophosphate isomerase [Bacillus cereus ATCC 14579] gi|228957874|ref|ZP_04119614.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229043343|ref|ZP_04191061.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH676] gi|229109054|ref|ZP_04238654.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-15] gi|229126912|ref|ZP_04255923.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-Cer4] gi|229144197|ref|ZP_04272611.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST24] gi|229149796|ref|ZP_04278025.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1550] gi|229189680|ref|ZP_04316694.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10876] gi|81435335|sp|Q81FS0|IDI2_BACCR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|29895191|gb|AAP08479.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 14579] gi|228593729|gb|EEK51534.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10876] gi|228633660|gb|EEK90260.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1550] gi|228639205|gb|EEK95621.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST24] gi|228656512|gb|EEL12339.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-Cer4] gi|228674332|gb|EEL29576.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-15] gi|228725991|gb|EEL77230.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH676] gi|228801790|gb|EEM48667.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 349 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|163939413|ref|YP_001644297.1| isopentenyl pyrophosphate isomerase [Bacillus weihenstephanensis KBAB4] gi|229132405|ref|ZP_04261259.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST196] gi|226707316|sp|A9VMA7|IDI2_BACWK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|163861610|gb|ABY42669.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus weihenstephanensis KBAB4] gi|228651111|gb|EEL07092.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST196] Length = 349 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESESASYKVVRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGVENLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGVKTIEEL 321 >gi|322517208|ref|ZP_08070090.1| isopentenyl-diphosphate delta-isomerase [Streptococcus vestibularis ATCC 49124] gi|322124195|gb|EFX95719.1| isopentenyl-diphosphate delta-isomerase [Streptococcus vestibularis ATCC 49124] Length = 335 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/327 (34%), Positives = 170/327 (51%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI+ K + FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIHYALK---YESPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-VDKSVDLGLK----TVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVATYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L ++ + + +ASGG+RN +D++K ++LGA GL+ L+ S D Sbjct: 228 GQSTVQTLLQSQDLREDVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYSVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA I + + + M L + + EL Sbjct: 288 VVAIINGWKDDLRLIMCALDCRTIDEL 314 >gi|75763038|ref|ZP_00742827.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896528|ref|YP_002444939.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus G9842] gi|228900179|ref|ZP_04064411.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 4222] gi|228907230|ref|ZP_04071091.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 200] gi|226707313|sp|B7IP77|IDI2_BACC2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|74489470|gb|EAO52897.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544905|gb|ACK97299.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus G9842] gi|228852451|gb|EEM97244.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 200] gi|228859449|gb|EEN03877.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 4222] Length = 349 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|228945198|ref|ZP_04107554.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814433|gb|EEM60698.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 349 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGF-HDIEFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I L + M LG K ++EL Sbjct: 297 DEINLLHADLKFIMTALGAKTIEEL 321 >gi|314934406|ref|ZP_07841765.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus caprae C87] gi|313652336|gb|EFS16099.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus caprae C87] Length = 349 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D ++ FD +H ++P I+ D+VD + + P+ I++M Sbjct: 9 RKNEHVEIAMSQH--DAHQSDFDKLRFVHHSIPSINVDQVDLTSHTSHFDMQSPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ ++IN LA+ A +T +AMAVGS + +F + RQ P ++ SN+ Sbjct: 67 TGGSD-WTKQINEKLAVVARETGLAMAVGSTHAALRNPKMADTFNIVRQTNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA Q+V +L A L +H+N QE++ P GN F I + + +D Sbjct: 126 GA-----DVPVEKALQSVELLEAQALQIHVNSPQELVMPEGNREFVTWMDNIEAIVNRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIVKEVGFGMSKETFKSLAEIGVQYVDVSGRGGTNFVDIENERRSNKDMDYLTQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL S + Sbjct: 240 STVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQSGITNTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K + L Sbjct: 300 EYVESFLNHMKKIMTMLDAKDIDSL 324 >gi|206970784|ref|ZP_03231736.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1134] gi|228951975|ref|ZP_04114072.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069151|ref|ZP_04202442.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus F65185] gi|229178006|ref|ZP_04305378.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 172560W] gi|206734420|gb|EDZ51590.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1134] gi|228605494|gb|EEK62943.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 172560W] gi|228713903|gb|EEL65787.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus F65185] gi|228807700|gb|EEM54222.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 349 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPIIVKEVGFGMSKETVQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|125717210|ref|YP_001034343.1| isopentenyl pyrophosphate isomerase [Streptococcus sanguinis SK36] gi|125497127|gb|ABN43793.1| Isopentenyl-diphosphate delta-isomerase, putative [Streptococcus sanguinis SK36] Length = 335 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|323353482|ref|ZP_08088015.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis VMC66] gi|322121428|gb|EFX93191.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis VMC66] Length = 335 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|308235869|ref|ZP_07666606.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis ATCC 14018] gi|311115035|ref|YP_003986256.1| putative isopentenyl-diphosphate delta-isomerase [Gardnerella vaginalis ATCC 14019] gi|310946529|gb|ADP39233.1| possible isopentenyl-diphosphate delta-isomerase [Gardnerella vaginalis ATCC 14019] Length = 829 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 123/359 (34%), Positives = 194/359 (54%), Gaps = 35/359 (9%) Query: 1 MVNDRKIDHINIVCK--DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK--KLS 56 ++ RK DHI + C+ D D F+ I ALP+++ +VD SV + K Sbjct: 473 LIEQRKDDHIKLACEQYDAHADAG---FEHVRFIPNALPQLALSDVDTSVSVFDESTKWD 529 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAP 115 PL I++MTGG+ K E IN +LA A KT +AMA GS + ++F +R++ P Sbjct: 530 TPLYINAMTGGSKKG-ENINESLARVAAKTGLAMASGSLSAALKNPRLAETFSVIRRFNP 588 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 +++N+ A ++A +AV +L A+ L +HLN QE++ G+ +F+ + I Sbjct: 589 QGFVMANVSA-----GASAEQAIKAVEILQANALQIHLNAAQELVMSEGDRDFSAWLNNI 643 Query: 176 ALLSSAMD---VPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLE 231 + SA+D VP+++KE GCG+S+ D+ L LK+ G+R D+ GRGGT++ IE+ R Sbjct: 644 ETIVSALDSMKVPVVVKETGCGMSAHDV-LRLKNVGVRAVDVGGRGGTNFVAIENARRGR 702 Query: 232 SDIGIVFQDWGIPTPLSLE--------MARPY-----CNEA--QFIASGGLRNGVDILKS 276 WG+ T SL + P CN A Q ASGG+R +D+++S Sbjct: 703 KSDYEFLDSWGLTTVESLLDIAQCDEILCEPRDSSDSCNSARMQVFASGGVRTPLDVVRS 762 Query: 277 IILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + LGAS G+A FL + + DA+V IES + + V M LLG K +++L N+ ++ Sbjct: 763 LRLGASAVGVAGEFLHTLINEGEDALVEQIESWKAQIRVIMALLGCKNIEDLRENSRIL 821 >gi|171184533|ref|YP_001793452.1| isopentenyl pyrophosphate isomerase [Thermoproteus neutrophilus V24Sta] gi|226707322|sp|B1YA32|IDI2_THENV RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|170933745|gb|ACB39006.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermoproteus neutrophilus V24Sta] Length = 354 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 181/336 (53%), Gaps = 16/336 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + + +FD+ LIH ALPE+ EVD + +FLG ++ P I Sbjct: 3 IDRRKNDHIYLASSEIS-QVGSPWFDEVILIHNALPELDLSEVDTTAKFLGAEVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG ++ +IN LA AAE + + VGSQR+ +FE+ ++ AP + Sbjct: 62 GAMTGGT-ELAGKINAELAKAAEAFGIPIYVGSQRIALVKPEVRWTFEVVKKNAPTVPKV 120 Query: 121 SNLGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL V+ A QAV ++ A + +HLN QE +QP G F + KI + Sbjct: 121 ANLGAPQLVELDEVKLAEWVSQAVDMVDAHAVAIHLNAAQEAVQPEGEPRFRGVLEKIKV 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE------SHRDLE 231 + A PL++KEVG G+S ++ L D+ G GGTS+ IE + L Sbjct: 181 VKRAAGRPLIVKEVGNGISR-EVAARLAGVADAIDVGGYGGTSFIAIEGARAAGAGAQLR 239 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I F+ WGIPT S+ A+ IASGG+R+G+D +K++ LGAS ++ P L Sbjct: 240 RRIAETFKLWGIPTAASICEAKSGYG-GYIIASGGIRSGLDGVKALALGASFFTMSQPLL 298 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K A++ + IE++ E +MFL+G + V+++ Sbjct: 299 KAALEGR--LKEEIETVVAEVKTAMFLIGARTVKDI 332 >gi|289550064|ref|YP_003470968.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus lugdunensis HKU09-01] gi|315659307|ref|ZP_07912171.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus lugdunensis M23590] gi|289179596|gb|ADC86841.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus lugdunensis HKU09-01] gi|315495732|gb|EFU84063.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus lugdunensis M23590] Length = 350 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 159/288 (55%), Gaps = 10/288 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I +V+ S KL +PL I++M Sbjct: 9 RKNEHVEIAMAQQ--DAPASDFDRVRFVHHSIPHIDVAQVNLSTHTSNFKLDYPLYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LA A +T +AMAVGS + + I+SF + RQ P V+ SN+ Sbjct: 67 TGGS-EWTKQINEKLATVARETGLAMAVGSTHAALRNPDMIESFRIARQVNPEGVIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V++A +AV ++ A L +H+N QE++ P GN FA IA + + + Sbjct: 126 GA-----DVPVERAVEAVELMEAQALQIHVNAPQELVMPEGNRTFASWMDNIAKMINHVP 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G S + G+ Y D++GRGGT++ IE+ R D+ + +WG Sbjct: 181 VPVIIKEVGFGFSKETFKALKDIGVTYVDVSGRGGTNFVSIENERRSNKDMNYL-ANWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 T SL ++ Y + ASGG+R +D +KS+ LGA G++ PFL Sbjct: 240 STVESLLESQAYQSSLNIFASGGIRTPLDAIKSLALGAKAVGMSRPFL 287 >gi|260890238|ref|ZP_05901501.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia hofstadii F0254] gi|260859858|gb|EEX74358.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia hofstadii F0254] Length = 335 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/326 (33%), Positives = 184/326 (56%), Gaps = 14/326 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI + D N FDD LIH ++P+ + DE+D S F FP I++ Sbjct: 3 NRKDDHIKYALEHES-DYNS--FDDVELIHSSIPKYNLDEIDLSTHFASHDFEFPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ ++IN+ LA A + + GS + +A SF + ++ P++ L +N Sbjct: 60 ITGGSENA-KKINQKLAKVANECNLLFVTGSYSAALKN-SADDSFNIVKKENPYSQLATN 117 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G + NY G+ A+ L L +H+N +QE+I P G+ NF + + + + Sbjct: 118 IG-IDKNYTAGIA----AIKALNPLFLQVHVNLMQELIMPEGSRNFNEWENNLKEFVQNI 172 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P++LKEVG G++ I+ G+K GI+ FDI+GRGGTS++ IE+ R E+ + + +WG Sbjct: 173 EIPIILKEVGFGMTENTIKQGIKLGIKTFDISGRGGTSFAFIENMRR-ENSLDYL-NNWG 230 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T L + Y ++A+ IASGG+RN +D++K ++LGA GL+ L+ A+ + + Sbjct: 231 QTTVSCLLNLKDYTDKAEIIASGGVRNPLDMIKCLVLGAKAVGLSRTILELAVKYDVENI 290 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +E+ + E + M L K ++EL Sbjct: 291 IKIVENWKIECKMIMCALNAKNIKEL 316 >gi|229155164|ref|ZP_04283276.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 4342] gi|228628291|gb|EEK85006.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 4342] Length = 349 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRVLMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|329730063|gb|EGG66453.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21193] Length = 349 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKAIGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|228984677|ref|ZP_04144850.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775071|gb|EEM23464.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 349 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|47565961|ref|ZP_00236999.1| isopentenyl diphosphate isomerase [Bacillus cereus G9241] gi|47556878|gb|EAL15208.1| isopentenyl diphosphate isomerase [Bacillus cereus G9241] Length = 349 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|229102202|ref|ZP_04232911.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-28] gi|228681103|gb|EEL35271.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-28] Length = 349 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDEREAASYKVVRKINPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 IPVIVKEVGFGMSKETVQQLVSIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K I LGA+ A FL+ M D + +V Sbjct: 237 QTTTSIIEATSTNNNLSFIASGGIQTALDVAKVIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|300361741|ref|ZP_07057918.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus gasseri JV-V03] gi|300354360|gb|EFJ70231.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus gasseri JV-V03] Length = 341 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 186/335 (55%), Gaps = 15/335 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + ++N F HLI ALPE + ++ + E G+K+S P I++M Sbjct: 7 RKEEHLALAKMFFNSNKNNDF-KHIHLIRPALPESAVNKESIATEMFGQKISAPFFINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ INR LA AA K + MA+GS ++ + + IKSFE+ RQ P +L +N+ Sbjct: 66 TGGSDASYT-INRRLAQAAAKENIPMALGSASILEKEIDQIKSFEIARQENPDGLLFANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 N + A + V VL A+ L +HLN +QE + P G+ +F L + + + A+D Sbjct: 125 -----NPTTKPKVAQKIVQVLNANALQIHLNSVQEAVMPEGDRDFHWLDN-LKAIRQAVD 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+ + L + D+ G GGT++++IE+ R + + +D G+ Sbjct: 179 VPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKNQKL-MFLEDIGL 237 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A +++++ Sbjct: 238 STVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFANQDTESLIV 297 Query: 304 AIESLRKEFIVSMFLLGTKRVQE-----LYLNTAL 333 AI++L+ E + L G K + E YL+T L Sbjct: 298 AIQNLKYELRLLTALFGLKNIAEADEVKYYLDTDL 332 >gi|324325615|gb|ADY20875.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 349 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ PH V +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPHGVFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + ++A +AV ++ A+ L +HLN +QE+ P G+ +F + ++ + Sbjct: 124 GS-----EATTEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRVEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|185535155|gb|ACC77853.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus xylosus] Length = 347 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 162/290 (55%), Gaps = 14/290 (4%) Query: 5 RKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I KD I FD+ +H ++P I D+VD + L+ PL I+ Sbjct: 9 RKNEHVEIAMAQKDATISD----FDEIRFVHHSIPNIDVDDVDLTSNLTDFTLNQPLYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + ++IN LA+ A +T +AMAVGS + SF + R+ P + S Sbjct: 65 AMTGGS-EWTKQINEKLAVIARETGIAMAVGSTHAALRNSKMASSFSVVRETNPEGIFFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA ++V +L A L +H+N QE++ P GN F+ +A + + Sbjct: 124 NVGA-----DVPVDKAVESVKLLDAQALQVHVNAPQELVMPEGNRTFSTWMENLAQIVAR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S I+ + GI+Y D++GRGGT++ IE+ R D+ + W Sbjct: 179 VDVPVIVKEVGFGMSKETIKSLNEIGIKYVDVSGRGGTNFVDIENERRTYKDMDYLGL-W 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G T SL + Y + +ASGG+R +D +K + LGAS G++ PFL Sbjct: 238 GQTTVESLLESTAYQQDMDILASGGVRTPLDAVKCLALGASAVGMSRPFL 287 >gi|218235127|ref|YP_002366279.1| isopentenyl pyrophosphate isomerase [Bacillus cereus B4264] gi|226707314|sp|B7HHQ2|IDI2_BACC4 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|218163084|gb|ACK63076.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus B4264] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + ++ Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLL 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|229078781|ref|ZP_04211334.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock4-2] gi|228704463|gb|EEL56896.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock4-2] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S++ +R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPIIVKEVGFGMSKETVQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKVIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG K ++EL Sbjct: 297 DEIELLHTDLKFIMTALGAKTIEEL 321 >gi|323480081|gb|ADX79520.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis 62] Length = 347 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 183/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD H +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVHFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ + DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSFL-DDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|332363142|gb|EGJ40927.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK49] Length = 335 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 173/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 DWG T SL + +P +E + +ASGG+R+ +D++K+++LGA GL+ L + S+ Sbjct: 228 DWGQSTLQSLLVLQPLRDEVELLASGGVRHPLDMVKALVLGAKAVGLSRTMLDLVENHSA 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLHLIMCALSCRNLQEL 316 >gi|229058233|ref|ZP_04196621.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH603] gi|228720097|gb|EEL71681.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH603] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVVRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ + D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILIQDGVENLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGVKTIEEL 321 >gi|82751941|ref|YP_417682.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus RF122] gi|91207076|sp|Q2YYY9|IDI2_STAAB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|82657472|emb|CAI81914.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus RF122] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I++M Sbjct: 9 RKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + + IN LA+ A +T +AMAVGS + ++F + R+ P ++ SN+ Sbjct: 67 TGGS-EWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S + Sbjct: 126 GA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ WG Sbjct: 181 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL Y ++ ASGGLR +D +KS+ LGA G++ PFL ++ A V Sbjct: 240 STVESLLETTAYQSKISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTV 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A +ES + M +L K + +L Sbjct: 300 AYVESFIEHMKSIMTMLDAKNIDDL 324 >gi|223042448|ref|ZP_03612497.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus capitis SK14] gi|222444111|gb|EEE50207.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus capitis SK14] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D + FD +H ++P I+ D+VD + + P+ I++M Sbjct: 9 RKNEHVEIAMSQH--DAPQSDFDKLRFVHHSIPSINVDQVDLTSHTSHFDMQSPVYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ ++IN LA+ A +T +AMAVGS + +F + RQ P ++ SN+ Sbjct: 67 TGGSD-WTKQINEKLAVVARETGLAMAVGSTHAALRNPKMADTFNIVRQTNPEGMIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V+KA Q+V +L A L +H+N QE++ P GN F I + + +D Sbjct: 126 GA-----DVPVEKALQSVELLEAQALQIHVNSPQELVMPEGNREFVTWMDNIEAIVNRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S + + G++Y D++GRGGT++ IE+ R D+ + Q WG Sbjct: 181 VPVIVKEVGFGMSKETFKSLAEIGVQYVDVSGRGGTNFVDIENERRSNKDMDYLTQ-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL S + Sbjct: 240 STVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQSGITNTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K + L Sbjct: 300 EYVESFLNHIKKIMTMLDAKDIDSL 324 >gi|73661865|ref|YP_300646.1| isopentenyl pyrophosphate isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|91207078|sp|Q49ZS3|IDI2_STAS1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|72494380|dbj|BAE17701.1| isopentenyl diphosphate isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 347 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 161/288 (55%), Gaps = 10/288 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I D FD+ +H ++P + D++D + + L PL I++M Sbjct: 9 RKNEHVEIAMAQG--DATISDFDEIRFVHHSIPSVDVDDIDLTSQLKDFTLDQPLYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + ++IN LA+ A +T +AMAVGS + SF + R P+ ++ SN+ Sbjct: 67 TGGS-EWTKQINEKLAVIARETGIAMAVGSTHAALRNSKMASSFSIVRDTNPNGIIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA ++V +L A L +H+N QE++ P GN F+ +A + S +D Sbjct: 126 GA-----DVPVDKAVESVKLLDAQALQVHVNAPQELVMPEGNRTFSTWMENLAQIVSRVD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S I+ + G+RY D++GRGGT++ IE+ R D+ + WG Sbjct: 181 VPVIVKEVGFGMSKETIKSLNEIGVRYVDVSGRGGTNFVDIENERRTYKDMDYLGL-WGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 T SL + Y + +ASGG+R +D +K + LGAS G++ PFL Sbjct: 240 TTVESLLESASYQQDMDILASGGVRTPLDAVKCLALGASAVGMSRPFL 287 >gi|229195799|ref|ZP_04322559.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1293] gi|228587696|gb|EEK45754.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1293] Length = 349 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKRHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHADLKFIMTALGAKTIEEL 321 >gi|119953462|ref|YP_945671.1| isopentenyl pyrophosphate isomerase [Borrelia turicatae 91E135] gi|119862233|gb|AAX18001.1| isopentenyl-diphosphate delta-isomerase [Borrelia turicatae 91E135] Length = 359 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 5/337 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++N++K I I + ++ + +L H AL E+ F E+D G ++ P+ Sbjct: 12 ILNNKK-RQIEICLDKEDVSKSDNLLNFVNLKHDALSELDFCEIDTRESIFGYDIAMPIF 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG K ++N++L A ++ M++GS +++F IK F LR+YA + L Sbjct: 71 ISSMTGGV-KEGNKLNKSLVKIANDLRIPMSLGSFKLIFKYPEYIKDFYLRKYAHNIPLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SN+GA QL +FG+ + + L D + +HLN QE++ G +F + IA + S Sbjct: 130 SNIGATQLR-EFGIFEIIEMNKRLEVDAIIVHLNSGQELMNLRGERSFRGIKDSIARICS 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++P+++KE G G+S + L G+ Y D+AG GGT+W +E ++ DI F + Sbjct: 189 VSNIPVIVKETGFGISPDSVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENLDIASCFAN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSD 299 WGI + L+L + + + F ASGG G+DI K I LGA L G+A+ L+ + Sbjct: 249 WGISSVLTLLSIKDFFKDKVF-ASGGYETGMDIAKGIALGAKLVGIAAAILRAFYAGGEN 307 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ ++ +SM L +K + + LN + H Sbjct: 308 ALYNLLKGYEYVLKMSMLLSNSKDLAQFRLNKYFLSH 344 >gi|322387268|ref|ZP_08060878.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis ATCC 700779] gi|321141797|gb|EFX37292.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis ATCC 700779] Length = 333 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 18/330 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M +RK +HI +++N + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRY-----ALEQNSTYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFP 55 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 I++MTGG++K E IN+ LA A+ + GS D + SF ++ P+ + Sbjct: 56 FYINAMTGGSDKGRE-INQKLAQVADACGILFVTGSYSAALKDPSD-DSFSVKTSYPNLL 113 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+G D V+ Q V + L +H+N +QE++ P G F ++ Sbjct: 114 LGTNIGL-----DKPVELGLQTVKEMNPLLLQIHVNVMQELLMPEGERQFRLWQHNLSDY 168 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + VPL+LKEVG G+ I + GIR D++GRGGTS++ IE+ R + D Sbjct: 169 VEQISVPLVLKEVGFGMDVKTIAKAYEMGIRTVDLSGRGGTSFAYIENRRSGQRD---YL 225 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG T +L A+ + ++ + + SGG+RN +DI+K ++ GA GL+ L+ + S Sbjct: 226 NDWGQSTMQALLNAQDWKDKMELLVSGGVRNPLDIIKCLVFGAKAVGLSRTMLELVENYS 285 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V++ IES +++ + M L K++++L Sbjct: 286 VDVVISIIESWKEDLRLIMCALNCKKIEDL 315 >gi|297242908|ref|ZP_06926846.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis AMD] gi|296889119|gb|EFH27853.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis AMD] Length = 787 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 115/349 (32%), Positives = 189/349 (54%), Gaps = 23/349 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS---- 56 ++ +RK HI + K R FD + ALP+++ +E+D SV LG ++ Sbjct: 442 IIQNRKDAHIALADKQYKT-RADSDFDKVRFVPNALPQVALEEIDASVSVLGSEVCDSVH 500 Query: 57 --FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQY 113 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F +R Sbjct: 501 WCSPIYINAMTGGSDAA-KKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSE 559 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 PH +++N+ A D A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 560 NPHGFVMANVSAGTSASD-----ALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLR 614 Query: 174 KIALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I + SA + VP+++KE GCG+S+ D++ G+R D++GRGGT++ IE+ R Sbjct: 615 NIESIVSACEALKVPVIVKETGCGISAKDVQCLKDVGVRTVDVSGRGGTNFVTIENARRN 674 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE---AQFIASGGLRNGVDILKSIILGASLGGLA 287 D DWG+ T SL R C+ + ASGG+R +D+++++ LGAS G+A Sbjct: 675 LGDCDY-LADWGLTTVESLVDIRK-CDSLKNMEVFASGGVRTPLDVVRALALGASAVGVA 732 Query: 288 SPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 733 GEFLHTLMHEGEDALSLQIDNWKKQIRVIMALLGCKTVKDLQEKTEFVR 781 >gi|229172236|ref|ZP_04299800.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus MM3] gi|228611224|gb|EEK68482.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus MM3] Length = 349 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H+ LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQGLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+ + R+ P+ V +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYTIIRKVNPNGVFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 RTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|196038958|ref|ZP_03106265.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus NVH0597-99] gi|196030103|gb|EDX68703.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus NVH0597-99] Length = 349 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|324990336|gb|EGC22274.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK353] Length = 335 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKSVGLSRAMLDLIENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|229090560|ref|ZP_04221795.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-42] gi|228692763|gb|EEL46487.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-42] Length = 349 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHADLKFIMTALGAKTIEEL 321 >gi|228914172|ref|ZP_04077790.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300117473|ref|ZP_07055263.1| isopentenyl pyrophosphate isomerase [Bacillus cereus SJ1] gi|228845505|gb|EEM90538.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|298725308|gb|EFI65960.1| isopentenyl pyrophosphate isomerase [Bacillus cereus SJ1] Length = 349 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHADLKFIMTALGAKTIEEL 321 >gi|229016855|ref|ZP_04173783.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1273] gi|229023061|ref|ZP_04179575.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1272] gi|228738207|gb|EEL88689.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1272] gi|228744416|gb|EEL94490.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1273] Length = 349 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ + + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKNESEAASYKIVRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLRRIEQIVLKSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLASIGITAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + ++ Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRVLMQDGVEKLM 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|312863054|ref|ZP_07723292.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus vestibularis F0396] gi|311100590|gb|EFQ58795.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus vestibularis F0396] Length = 335 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 169/327 (51%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI+ K + FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIHYALK---YESPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-VDKSVDLGLK----TVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVATYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L ++ + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQSQDLREDVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA I + + + M L + + EL Sbjct: 288 VVAIINGWKDDLRLIMCALDCRTIDEL 314 >gi|229029278|ref|ZP_04185368.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1271] gi|228732026|gb|EEL82918.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1271] Length = 349 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H+ LP S+D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQGLPNSSYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPKGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|257899512|ref|ZP_05679165.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com15] gi|257837424|gb|EEV62498.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com15] Length = 351 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 179/327 (54%), Gaps = 11/327 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEKT-KKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIVRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I+ G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETIKDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M+ + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELY 328 + ++ ++E + ++G + L+ Sbjct: 293 IMLMKQWQEELRLLYTMIGATNIATLH 319 >gi|116627446|ref|YP_820065.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus LMD-9] gi|116100723|gb|ABJ65869.1| L-lactate dehydrogenase (FMN-dependent) or related alpha-hydroxy acid dehydrogenase [Streptococcus thermophilus LMD-9] Length = 335 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALK---YQSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V L LH+N +QE++ P G F +A + Sbjct: 116 NIG-VDKSVDLGIKTVEAMDPVF----LQLHVNLMQELLMPEGERIFHTWKENVAAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA + + + + M L + + EL Sbjct: 288 VVAIVNGWKDDLRLIMCALDCRTIDEL 314 >gi|206974902|ref|ZP_03235817.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus H3081.97] gi|217959076|ref|YP_002337624.1| isopentenyl pyrophosphate isomerase [Bacillus cereus AH187] gi|222095229|ref|YP_002529289.1| isopentenyl pyrophosphate isomerase [Bacillus cereus Q1] gi|229138292|ref|ZP_04266887.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST26] gi|226707315|sp|B7HL09|IDI2_BACC7 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803424|sp|B9IVM2|IDI2_BACCQ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|206746921|gb|EDZ58313.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus H3081.97] gi|217065248|gb|ACJ79498.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH187] gi|221239287|gb|ACM11997.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus Q1] gi|228645184|gb|EEL01421.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST26] Length = 349 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHADLKFIMTALGAKTIEEL 321 >gi|325689459|gb|EGD31464.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK115] Length = 335 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSPKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPFQAAQQAVADLQPLFLQFHVNLMQELLMPEGEREFRSWRQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAILDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|293556922|ref|ZP_06675483.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1039] gi|291601006|gb|EFF31297.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1039] Length = 354 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHISLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|49481031|ref|YP_035715.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81396667|sp|Q6HL56|IDI2_BACHK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|49332587|gb|AAT63233.1| isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 349 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|301053137|ref|YP_003791348.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis CI] gi|300375306|gb|ADK04210.1| isopentenyl pyrophosphate isomerase [Bacillus cereus biovar anthracis str. CI] Length = 349 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHADLKFIMTALGAKTIEEL 321 >gi|293572993|ref|ZP_06683935.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E980] gi|291606895|gb|EFF36275.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E980] Length = 351 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 178/327 (54%), Gaps = 11/327 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIVRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M+ + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELY 328 + ++ ++E + ++G + L+ Sbjct: 293 IMLMKQWQEELRLLYTMVGATNIATLH 319 >gi|52143849|ref|YP_082979.1| isopentenyl pyrophosphate isomerase [Bacillus cereus E33L] gi|81688715|sp|Q63DN3|IDI2_BACCZ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51977318|gb|AAU18868.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus E33L] Length = 349 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|322391510|ref|ZP_08064979.1| isopentenyl-diphosphate delta-isomerase [Streptococcus peroris ATCC 700780] gi|321145593|gb|EFX40985.1| isopentenyl-diphosphate delta-isomerase [Streptococcus peroris ATCC 700780] Length = 333 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 18/330 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M +RK +HI +++N + FD+ LIH +LP + +E+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRY-----ALEQNSTYNSFDEVELIHSSLPLYNIEEIDLSTEFAGRKWDFP 55 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 I++MTGG+NK E IN+ LA AE + GS D + SF ++ P + Sbjct: 56 FYINAMTGGSNKGKE-INQKLAQVAEACGILFVTGSYSAALKDPSD-DSFAVKSNHPDLL 113 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+G + +FG+Q + +L L +H+N +QE++ P G F S + Sbjct: 114 LGTNIG-LDKPVEFGLQTVKEMNPLL----LQVHVNVMQELLMPEGERQFRLWQSNLKDY 168 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + + VPL+LKEVG G+ I + GIR D++GRGGTS++ IE+ R + D Sbjct: 169 AEQISVPLVLKEVGFGMDVKTIAKAYEMGIRTVDLSGRGGTSFAYIENRRSGQRD---YL 225 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG T +L A+ + ++ + + SGG+RN +DI+K ++ GA GL+ L+ + S Sbjct: 226 NDWGQSTMQALLNAQDWKDKMELLVSGGVRNPLDIIKCLVFGAKAVGLSRTMLELVENHS 285 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V+ ++ +++ + M L R+++L Sbjct: 286 VDEVITIVQGWKEDLRLIMCALNCVRIEDL 315 >gi|228474542|ref|ZP_04059273.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis SK119] gi|314935756|ref|ZP_07843108.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis subsp. hominis C80] gi|228271205|gb|EEK12573.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis SK119] gi|313656321|gb|EFS20061.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis subsp. hominis C80] Length = 349 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ I + ++ FD +H ++P I+ ++VD + ++FPL I++M Sbjct: 9 RKNEHVEIAMAQQDVPQSD--FDRMRFVHHSIPNINVNQVDLTSHTSNFDMTFPLYINAM 66 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ + IN LA+ A +T +AMAVGS + +SF + R+ P ++ SN+ Sbjct: 67 TGGSD-WTKTINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIVRKTNPEGIIFSNV 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V KA +AV +L A L +H+N QE++ P GN F+ + + + Sbjct: 126 GA-----DVPVDKAVKAVELLDAQALQVHVNAPQELVMPEGNREFSTWLENVEAIVQRVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ + G+ Y D++G+GGT++ IE+ R D+ +WG Sbjct: 181 VPVIIKEVGFGMSKELLQSLVNIGVTYVDVSGKGGTNFVTIENERRSNKDMDY-LSNWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + Y N+ ASGGLR +D +KS+ LGA G++ PFL + + + Sbjct: 240 STVESLLESISYQNKLNVFASGGLRTPLDAIKSLALGAKAVGMSRPFLNQVEHAGITSTI 299 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +ES M +L K + +L Sbjct: 300 EYVESFIDHMKSIMTMLDAKDINDL 324 >gi|42780700|ref|NP_977947.1| isopentenyl pyrophosphate isomerase [Bacillus cereus ATCC 10987] gi|81569704|sp|Q73AZ6|IDI2_BACC1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|42736620|gb|AAS40555.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10987] Length = 349 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 173/325 (53%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP ++D + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLRRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIVEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|256761655|ref|ZP_05502235.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T3] gi|256682906|gb|EEU22601.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T3] Length = 356 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 31 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 90 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 145 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 205 SIGVQAVDVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 263 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 264 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 323 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 324 TTEELT-STALI 334 >gi|302023330|ref|ZP_07248541.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 05HAS68] gi|330832131|ref|YP_004400956.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis ST3] gi|329306354|gb|AEB80770.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis ST3] Length = 365 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 110/331 (33%), Positives = 175/331 (52%), Gaps = 15/331 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F +R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L M Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREM 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + G++ D++G GGT +++IE+ R +D + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGGTDFAKIENARRTFNDY-TYLEGWG 241 Query: 243 IPTPLSLEMARPYCNEAQ--FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E + IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + AI++ + + M +LG K + EL Sbjct: 302 RFDDGLQAIKTYQWQMAEIMTMLGAKNIAEL 332 >gi|261207163|ref|ZP_05921852.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TC 6] gi|289565284|ref|ZP_06445735.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium D344SRF] gi|294615075|ref|ZP_06694961.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1636] gi|260078791|gb|EEW66493.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TC 6] gi|289162940|gb|EFD10789.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium D344SRF] gi|291592017|gb|EFF23640.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1636] Length = 354 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|294617087|ref|ZP_06696754.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1679] gi|291596645|gb|EFF27871.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1679] Length = 354 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|332364782|gb|EGJ42551.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1059] Length = 335 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 171/329 (51%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG++K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSHKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVADGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QA+ L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPYQAAQQAIADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E +ASGG+R+ +D++KS++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVDLLASGGVRHPLDMIKSLVLGAKAVGLSRTMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKLDLRLIMCALSCRNLQEL 316 >gi|307290917|ref|ZP_07570807.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0411] gi|306497987|gb|EFM67514.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0411] Length = 347 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 182/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ + DWG T LSL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSFL-DDWGQSTVLSLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|324992166|gb|EGC24088.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK405] gi|327459482|gb|EGF05828.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1] gi|327472890|gb|EGF18317.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK408] gi|327490681|gb|EGF22462.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1058] Length = 335 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + + N FD+ LIHR+LP+ E+D S F G+ +FP Sbjct: 2 MSQNRKDDHIKYALEQR-LGYNS--FDEMELIHRSLPKYDLAEIDLSTHFAGRDWAFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGLPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VPL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLEVPLILKEVGFGMDRSTVEEARFFGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ +E + + + M L + +QEL Sbjct: 289 EVIDIVEGWKSDLRLVMCALSCRNLQEL 316 >gi|325693778|gb|EGD35697.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK150] Length = 335 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 110/329 (33%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPYQAAQQAVADLKPLFLQVHVNLMQELLMPEGEREFRSWLQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL + +P +E + +ASGG+R+ +D++K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLVLQPLRDEVELLASGGVRHPLDMVKALVLGAKAVGLSRTMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|311030568|ref|ZP_07708658.1| isopentenyl pyrophosphate isomerase [Bacillus sp. m3-13] Length = 353 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 176/325 (54%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI + + FDD +H++LP +S ++ + + LS P+ I++M Sbjct: 6 RKMDHIQHALTTGQVRQTG--FDDVMFVHQSLPNLSTTDIQLNTKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG K IN+ LA A V +AVGSQ D + ++E+ R+ P+ ++ +NL Sbjct: 64 TGGGGKRTWEINKALAEVANMCDVGLAVGSQMSAIKDRDEAATYEIVRKANPNGLIFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V +A QAV +L A+ L +HLN +QE++ P G+ +F+ +I + ++++ Sbjct: 124 GS-----EATVDQAKQAVDMLEANALQIHLNVIQELVMPEGDRDFSGALGRIEDIVNSLN 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KE G G+S + + +G+ D++G GGT++S+IE+ R + F DWGI Sbjct: 179 VPVIVKETGFGISRETAKKLVDAGVSIIDVSGFGGTNFSKIENERRTQRL--EFFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 PT S+ + I SGG++ +DI K+I LGAS GLA FLK M+ + ++ Sbjct: 237 PTAASIAEVKHAVPGTSIIGSGGIQKPMDIAKAIALGASAVGLAGYFLKVFMEEGQEDLI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I E M L +++L Sbjct: 297 HLIHQTHDELRWMMTALSASTIEQL 321 >gi|260558441|ref|ZP_05830637.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium C68] gi|260075615|gb|EEW63921.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium C68] Length = 354 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 T SL A + +ASGG+RN DI K++ LGA+ G + L M Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLM 285 >gi|257885790|ref|ZP_05665443.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,501] gi|257821646|gb|EEV48776.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,501] Length = 354 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|322372486|ref|ZP_08047022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C150] gi|321277528|gb|EFX54597.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C150] Length = 334 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/327 (33%), Positives = 164/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F+G+ FP I Sbjct: 1 MTNRKDDHIRYALK---YQSPYNSFDDMELIHKSLPTYDLDQIDLSTHFVGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS +SF+ RQ P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGETP-ESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-VDKSVDLGIK----TVEAMNPVFLQLHVNLMQELLMPEGERIFHTWKENVAAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +D PL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IDCPLVLKEVGFGMDVETIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRDY---LNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQTQDLREAVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA + + + + M L + V EL Sbjct: 288 VVAVVNGWKDDLRLIMCALDCRTVDEL 314 >gi|307275318|ref|ZP_07556461.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2134] gi|306507952|gb|EFM77079.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2134] Length = 347 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAVDVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|212638921|ref|YP_002315441.1| isopentenyl pyrophosphate isomerase [Anoxybacillus flavithermus WK1] gi|212560401|gb|ACJ33456.1| Isopentenyl diphosphate isomerase [Anoxybacillus flavithermus WK1] Length = 354 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+ HI R F+D +H +LP IS +D + L P+ I++M Sbjct: 10 RKLQHIEYALATG--QRRLHGFEDVTFVHNSLPNISTAHIDLQTKIGELSLRSPIFINAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG +IN LA A + +AMAVGSQ D +SF + RQ ++ +NL Sbjct: 68 TGGGGAETTKINEQLAYVANEYGLAMAVGSQMAALKDERERQSFTIIRQVNKRGMVFANL 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V +A +AV ++ A+ L +HLN +QE++ P G+ NF S+I + SA+D Sbjct: 128 GS-----EATVDEAKRAVDMIEANALQIHLNVVQELVMPEGDRNFCGALSRIEQIVSAVD 182 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S G+ D+ G GGT++++IE+ R E + F +WGI Sbjct: 183 VPVIVKEVGFGMSKETARKLEDIGVCAVDVGGFGGTNFAQIENKRR-EKQLS-YFNEWGI 240 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T S+ I SGG+++ +D+ K + LGAS G+A L+ ++ +A++ Sbjct: 241 TTTASIAEVASEVQRISIIGSGGVQHALDVAKCVALGASAVGMAGYMLRLLIEQGVEALI 300 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A I L ++ V M LGT+ + +L Sbjct: 301 AEINQLHEDLTVIMTALGTRTIFDL 325 >gi|227550898|ref|ZP_03980947.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TX1330] gi|257896531|ref|ZP_05676184.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com12] gi|227179996|gb|EEI60968.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TX1330] gi|257833096|gb|EEV59517.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com12] Length = 351 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA G + L M+ Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMN 286 >gi|118467490|ref|YP_886682.1| isopentenyl pyrophosphate isomerase [Mycobacterium smegmatis str. MC2 155] gi|118468592|ref|YP_885453.1| isopentenyl pyrophosphate isomerase [Mycobacterium smegmatis str. MC2 155] gi|118168777|gb|ABK69673.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium smegmatis str. MC2 155] gi|118169879|gb|ABK70775.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium smegmatis str. MC2 155] Length = 341 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 155/285 (54%), Gaps = 17/285 (5%) Query: 5 RKIDHINIVCKDPGIDRNK--KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK HI+ VC + +D + + L + AL + + E+D + FLGK L P+LI Sbjct: 12 RKRRHID-VCLNEAVDHQSVSTGLERYRLPYHALTQTNLTEIDLTTNFLGKPLRAPVLIG 70 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF-----SDHNAIKSFELRQYAPHT 117 +MTGG ++ INRNLA AA+K V M +GSQR+M + H + +SF +R AP Sbjct: 71 AMTGGA-ELSGTINRNLAAAAQKLGVGMMLGSQRIMLRSGEQAAHRS-ESFAVRDVAPDV 128 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L+ N+G QL +D A+ +GAD L +H NPLQE IQ NG+T+FA ++ Sbjct: 129 LLVGNIGLSQLTHD-NAPLITDALRRVGADALAVHTNPLQEAIQANGDTDFAGSRERLLE 187 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSG-----IRYFDIAGRGGTSWSRIESHRDLES 232 + ++ PLLLKEVG G+ + + L G + D+AG GGTSWSR+E + Sbjct: 188 IGPSIGCPLLLKEVGHGIGAAAVAE-LTGGRDDVPVAAIDVAGAGGTSWSRVEQFVRYGT 246 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 DWG+PT ++ R +ASGG+R G+D K + Sbjct: 247 VRYPDLADWGVPTARAIIEVRQALPRIPLVASGGIRTGMDAAKGL 291 >gi|255971351|ref|ZP_05421937.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T1] gi|255973970|ref|ZP_05424556.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T2] gi|256617769|ref|ZP_05474615.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ATCC 4200] gi|256957242|ref|ZP_05561413.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis DS5] gi|256964280|ref|ZP_05568451.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis HIP11704] gi|257077784|ref|ZP_05572145.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis JH1] gi|257081144|ref|ZP_05575505.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis E1Sol] gi|257086238|ref|ZP_05580599.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis D6] gi|257089311|ref|ZP_05583672.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis CH188] gi|257415463|ref|ZP_05592457.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis AR01/DG] gi|255962369|gb|EET94845.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T1] gi|255966842|gb|EET97464.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T2] gi|256597296|gb|EEU16472.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ATCC 4200] gi|256947738|gb|EEU64370.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis DS5] gi|256954776|gb|EEU71408.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis HIP11704] gi|256985814|gb|EEU73116.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis JH1] gi|256989174|gb|EEU76476.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis E1Sol] gi|256994268|gb|EEU81570.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis D6] gi|256998123|gb|EEU84643.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis CH188] gi|257157291|gb|EEU87251.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ARO1/DG] Length = 356 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 31 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 90 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 145 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 205 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 263 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 264 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 323 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 324 TTEELT-STALI 334 >gi|257893351|ref|ZP_05673004.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,408] gi|257829730|gb|EEV56337.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,408] Length = 351 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA G + L M+ Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMN 286 >gi|228478160|ref|ZP_04062768.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus salivarius SK126] gi|228249839|gb|EEK09109.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus salivarius SK126] Length = 334 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 166/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALK---YQSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-VDKSVDLGIK----TVEAMNPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDVETIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLRDNVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA + + + + M L + V EL Sbjct: 288 VVAIVNGWKDDLRLIMCALDCRTVDEL 314 >gi|324994262|gb|EGC26176.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK678] gi|325697897|gb|EGD39781.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK160] Length = 335 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + + N FD+ LIHR+LP+ E+D S F G+ +FP Sbjct: 2 MSQNRKDDHIKYALEQR-LGYNS--FDEMELIHRSLPKYDLAEIDLSTHFAGRDWAFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGLPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQYLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VPL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLEVPLILKEVGFGMDRSTVEEARFFGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L + S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ +E + + + M L + +QEL Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|118477053|ref|YP_894204.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis str. Al Hakam] gi|196046665|ref|ZP_03113889.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB108] gi|225863462|ref|YP_002748840.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB102] gi|229183793|ref|ZP_04311010.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BGSC 6E1] gi|166226195|sp|A0RBV4|IDI2_BACAH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803423|sp|C1EMZ6|IDI2_BACC3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|118416278|gb|ABK84697.1| isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis str. Al Hakam] gi|196022598|gb|EDX61281.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB108] gi|225788808|gb|ACO29025.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB102] gi|228599642|gb|EEK57245.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BGSC 6E1] Length = 349 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 172/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ + + LS P+ I++M Sbjct: 6 RKLDHIEYAL-STGQSRTHGFHD-IDFVHQSLPNSSYETITCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +NL Sbjct: 64 TGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 124 GS-----EATVEQAELAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSK 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WGI Sbjct: 179 VPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + +V Sbjct: 237 QTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I+ L + M LG K ++EL Sbjct: 297 DEIDLLHTDLKFIMTALGAKTIEEL 321 >gi|298253294|ref|ZP_06977086.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis 5-1] gi|297532689|gb|EFH71575.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis 5-1] Length = 779 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 115/348 (33%), Positives = 187/348 (53%), Gaps = 23/348 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS----- 56 + +RK HI + K R FD + ALP+++ +E+D SV LG ++ Sbjct: 435 IQNRKDAHIALADKQYKT-RADSDFDKVRFVPNALPQVALEEIDDSVSVLGSEVCDSVRW 493 Query: 57 -FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYA 114 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F +R Sbjct: 494 CSPIYINAMTGGSDAA-KKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSEN 552 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 PH +++N+ A D A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 553 PHGFVMANVSAGTSASD-----ALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLCN 607 Query: 175 IALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + SA + VP+++KE GCG+S+ D+ G+R D++GRGGT++ IE+ R Sbjct: 608 IESIVSACEALSVPVIVKETGCGISAKDVHRLKDVGVRTVDVSGRGGTNFVTIENARRNL 667 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE---AQFIASGGLRNGVDILKSIILGASLGGLAS 288 D DWG+ T SL R C+ + ASGG+R +D+++++ LGAS G+A Sbjct: 668 GDCDY-LADWGLTTVESLVDIRK-CDSLKNMEVFASGGVRTPLDVVRALALGASAVGVAG 725 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 726 EFLHTLMHEGEDALSLQIDNWKKQIRVIMALLGCKTVKDLQEKTEFVR 773 >gi|146317948|ref|YP_001197660.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 05ZYH33] gi|146320135|ref|YP_001199846.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 98HAH33] gi|253751172|ref|YP_003024313.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis SC84] gi|253753073|ref|YP_003026213.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis P1/7] gi|253754895|ref|YP_003028035.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis BM407] gi|145688754|gb|ABP89260.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Streptococcus suis 05ZYH33] gi|145690941|gb|ABP91446.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Streptococcus suis 98HAH33] gi|251815461|emb|CAZ51039.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis SC84] gi|251817359|emb|CAZ55095.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis BM407] gi|251819318|emb|CAR44670.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis P1/7] gi|292557732|gb|ADE30733.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus suis GZ1] gi|319757441|gb|ADV69383.1| isopentenyl pyrophosphate isomerase [Streptococcus suis JS14] Length = 365 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/331 (33%), Positives = 175/331 (52%), Gaps = 15/331 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F +R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L M Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREM 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + +G++ D++G GGT +++IE+ R +D + + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASAGVQTIDVSGTGGTDFAKIENARRTFNDYAYL-EGWG 241 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVCPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + AI+ + + M +LG K + EL Sbjct: 302 RFDDGLQAIKVYQWQIAEIMTMLGAKNIAEL 332 >gi|229546745|ref|ZP_04435470.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX1322] gi|229548837|ref|ZP_04437562.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis ATCC 29200] gi|256854255|ref|ZP_05559619.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T8] gi|257421145|ref|ZP_05598135.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis X98] gi|294781311|ref|ZP_06746657.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis PC1.1] gi|307267976|ref|ZP_07549364.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4248] gi|307271900|ref|ZP_07553168.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0855] gi|307278404|ref|ZP_07559479.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0860] gi|312901557|ref|ZP_07760830.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0470] gi|312904460|ref|ZP_07763619.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0635] gi|312952832|ref|ZP_07771694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0102] gi|229306066|gb|EEN72062.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis ATCC 29200] gi|229308094|gb|EEN74081.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX1322] gi|256709815|gb|EEU24859.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T8] gi|257162969|gb|EEU92929.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis X98] gi|294451647|gb|EFG20103.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis PC1.1] gi|306504910|gb|EFM74105.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0860] gi|306511406|gb|EFM80408.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0855] gi|306515617|gb|EFM84144.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4248] gi|310629348|gb|EFQ12631.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0102] gi|310632158|gb|EFQ15441.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0635] gi|311291352|gb|EFQ69908.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0470] gi|315027086|gb|EFT39018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2137] gi|315029770|gb|EFT41702.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4000] gi|315032470|gb|EFT44402.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0017] gi|315034296|gb|EFT46228.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0027] gi|315148058|gb|EFT92074.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4244] gi|315149660|gb|EFT93676.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0012] gi|315155204|gb|EFT99220.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0043] gi|315157532|gb|EFU01549.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0312] gi|315165239|gb|EFU09256.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1302] gi|315172003|gb|EFU16020.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1342] gi|315174856|gb|EFU18873.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1346] gi|315577317|gb|EFU89508.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0630] gi|327534481|gb|AEA93315.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis OG1RF] gi|329577892|gb|EGG59313.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1467] Length = 347 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 182/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ + DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSFL-DDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|306828926|ref|ZP_07462118.1| isopentenyl-diphosphate delta-isomerase [Streptococcus mitis ATCC 6249] gi|304429104|gb|EFM32192.1| isopentenyl-diphosphate delta-isomerase [Streptococcus mitis ATCC 6249] Length = 333 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 172/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKN---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTILELVETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V++ I+ +++ + M L + +L Sbjct: 288 EVISIIQGWKEDLRLIMCALNCTAIADL 315 >gi|307286708|ref|ZP_07566794.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0109] gi|306502186|gb|EFM71470.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0109] Length = 347 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKIT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|257083813|ref|ZP_05578174.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Fly1] gi|256991843|gb|EEU79145.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Fly1] Length = 356 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 31 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 90 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 145 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIIQAVEVPVIVKEVGFGMSQETLEKLT 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 205 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 263 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 264 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 323 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 324 TTEELT-STALI 334 >gi|315152973|gb|EFT96989.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0031] Length = 347 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLSTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|257418495|ref|ZP_05595489.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T11] gi|257160323|gb|EEU90283.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T11] Length = 356 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 31 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 90 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 145 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 205 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 263 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 264 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 323 Query: 323 RVQELYLNTALI 334 +EL +TAL+ Sbjct: 324 TTEELT-STALV 334 >gi|256960025|ref|ZP_05564196.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Merz96] gi|256950521|gb|EEU67153.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Merz96] Length = 356 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 31 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 90 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 145 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 205 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 263 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +D++K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 264 GGVRNSLDVVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 323 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 324 TTEELT-STALI 334 >gi|227529131|ref|ZP_03959180.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus vaginalis ATCC 49540] gi|227350975|gb|EEJ41266.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus vaginalis ATCC 49540] Length = 358 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 112/326 (34%), Positives = 186/326 (57%), Gaps = 12/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K + F+ +IH++LPEIS ++V+P +L+FP I +M Sbjct: 21 RKNEHLSLATKLYN-QVHTNSFNSMQVIHKSLPEISLNQVNPVTNCGNLRLAFPFFIEAM 79 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + +IN+ LA A+K +AMA+GS ++F D A KSF++ R P ++I+NL Sbjct: 80 TGGSQNAL-KINQELATVAKKHHLAMALGSASIIFHDPAAKKSFKIVRDVNPDGIIIANL 138 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A +++A + +LGA+ L LH+N QE+I +G+ +F L++ I L + ++ Sbjct: 139 SA-----KASLEQAKTVIDLLGANALELHINTTQELIMDDGDRDFHWLTN-IESLVNHLN 192 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G+ S I G+ +++GRGGT+++ IE R+ +D + Q WG Sbjct: 193 IPVIVKEVGFGMDSSTINQLQSIGVSIINVSGRGGTNFAAIEDRRNHTADFSFLDQ-WGQ 251 Query: 244 PTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T S LE + Q IASGG+ + +D++K+ ILGA+ G+A FL + D DA+ Sbjct: 252 TTLESMLEAREARTKDTQIIASGGICSPLDVIKAGILGANAVGVAGYFLNILIRDGIDAL 311 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + S + + LLG K EL Sbjct: 312 DKELTSWQIALPRLLALLGCKSFNEL 337 >gi|152975022|ref|YP_001374539.1| isopentenyl pyrophosphate isomerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189044239|sp|A7GN36|IDI2_BACCN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|152023774|gb|ABS21544.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cytotoxicus NVH 391-98] Length = 349 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 171/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI G R F D +H++LP SF+ V + LS P+ I++M Sbjct: 6 RKLEHIEYAL-STGQSRTHGFCD-IEFVHKSLPNSSFESVTCETKIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA A+ +AMAVGSQ + + S+ + R+ P+ ++ +NL Sbjct: 64 TGGGGERTLHINEQLAYVAKHHHLAMAVGSQMAALKEKREVDSYRIVRRVNPNGIVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A AV ++ A+ L +HLN +QE+ P G+ +F + +I + + Sbjct: 124 GS-----EATVEQAKCAVDMIEANALQIHLNVIQELTMPEGDRDFKGVLKRIENIVLTSE 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + + F DWGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLANIGVTAIDIGGQGGTNFAAVENER--RNRMLSYFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T S+ A N IASGG++ +D+ K+I LGA A FL+ M+ D ++ Sbjct: 237 QTASSIIEASSTNNTLSLIASGGIQTALDVAKAIALGAQATAFAGYFLRILMNEGMDTLI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E L + M LG K + EL Sbjct: 297 EEVELLHTDLRFIMTALGAKNILEL 321 >gi|283782814|ref|YP_003373568.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gardnerella vaginalis 409-05] gi|283441062|gb|ADB13528.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gardnerella vaginalis 409-05] Length = 779 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 115/348 (33%), Positives = 187/348 (53%), Gaps = 23/348 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS----- 56 + +RK HI + K R FD + ALP+++ +E+D SV LG ++ Sbjct: 435 IQNRKDAHIALADKQYKT-RADSDFDKVRFVPNALPQVALEEIDDSVSVLGSEVCDSVHW 493 Query: 57 -FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYA 114 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F +R Sbjct: 494 CSPIYINAMTGGSDAA-KKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSEN 552 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 PH +++N+ A D A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 553 PHGFVMANVSAGTSASD-----ALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLCN 607 Query: 175 IALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + SA + VP+++KE GCG+S+ D+ G+R D++GRGGT++ IE+ R Sbjct: 608 IESIVSACEALSVPVIVKETGCGISAKDVHRLKDVGVRTVDVSGRGGTNFVTIENARRNL 667 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE---AQFIASGGLRNGVDILKSIILGASLGGLAS 288 D DWG+ T SL R C+ + ASGG+R +D+++++ LGAS G+A Sbjct: 668 GDCDY-LADWGLTTVESLVDIRK-CDSLKNMEVFASGGVRTPLDVVRALALGASAVGVAG 725 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 726 EFLHTLMHEGEDALSLQIDNWQKQIRVIMALLGCKTVKDLQEKTEFVR 773 >gi|257887851|ref|ZP_05667504.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,141,733] gi|257823905|gb|EEV50837.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,141,733] Length = 351 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPIIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA G + L M+ Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMN 286 >gi|315145812|gb|EFT89828.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2141] gi|315163040|gb|EFU07057.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0645] Length = 347 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TAL+ Sbjct: 315 TTEELT-STALV 325 >gi|293383779|ref|ZP_06629686.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis R712] gi|293388745|ref|ZP_06633238.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis S613] gi|312907005|ref|ZP_07766001.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 512] gi|312978737|ref|ZP_07790464.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 516] gi|291078855|gb|EFE16219.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis R712] gi|291081902|gb|EFE18865.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis S613] gi|310626990|gb|EFQ10273.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 512] gi|311288444|gb|EFQ67000.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 516] Length = 347 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +D++K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDVVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|257126423|ref|YP_003164537.1| isopentenyl pyrophosphate isomerase [Leptotrichia buccalis C-1013-b] gi|257050362|gb|ACV39546.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia buccalis C-1013-b] Length = 335 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 105/326 (32%), Positives = 179/326 (54%), Gaps = 14/326 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI + + FDD LIH ++P+ + DE+D S F FP I++ Sbjct: 3 NRKDDHIKYALEH---ESEYNSFDDVELIHSSIPKYNLDEIDLSTHFASHDFEFPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ ++IN+ LA A + + GS + N SF++ ++ P L +N Sbjct: 60 ITGGSENA-KKINQKLAKVANECNLLFVTGSYSAALKNSND-DSFKIVKKENPDLQLATN 117 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G + NY G+ A+ L L +H+N +QE+I P G+ NF + + + + Sbjct: 118 IG-IDKNYTAGIA----AIKALNPLFLQVHVNLMQELIMPEGSRNFNEWENNLKEFVENI 172 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P++LKEVG G++ I+ G+K GI+ FDI+GRGGTS++ IE+ R E+ + + +WG Sbjct: 173 NIPIILKEVGFGMTEDTIKQGIKLGIKTFDISGRGGTSFAFIENMRR-ENSLDYL-NNWG 230 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T L + Y ++ + IASGG++N +D++K ++LGA G++ L+ + + V Sbjct: 231 QTTVSCLLNLKNYTDKVEIIASGGVKNPLDMIKCLVLGAKAVGISRTILELVVKYDVEKV 290 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +ES + E + M L K +QEL Sbjct: 291 IKIVESWKNECKMIMCALNAKNIQEL 316 >gi|29375485|ref|NP_814639.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis V583] gi|81585436|sp|Q837E2|IDI2_ENTFA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|29342945|gb|AAO80709.1| isopentenyl diphosphate delta isomerase, putative [Enterococcus faecalis V583] gi|295113907|emb|CBL32544.1| isopentenyl-diphosphate delta-isomerase [Enterococcus sp. 7L76] gi|315167964|gb|EFU11981.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1341] gi|315574186|gb|EFU86377.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0309B] gi|315581671|gb|EFU93862.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0309A] Length = 347 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TAL+ Sbjct: 315 TTEELT-STALV 325 >gi|312277966|gb|ADQ62623.1| L-lactate dehydrogenase (FMN-dependent) alpha-hydroxy acid dehydrogenase-like protein [Streptococcus thermophilus ND03] Length = 335 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 110/327 (33%), Positives = 164/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALK---YQSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-VDKSVDLGIK----TVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA + + + M L + + EL Sbjct: 288 VVAIVNGWKDDLRFIMCALDCRTIDEL 314 >gi|54024179|ref|YP_118421.1| isopentenyl pyrophosphate isomerase [Nocardia farcinica IFM 10152] gi|81823130|sp|Q5YXN4|IDI2_NOCFA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54015687|dbj|BAD57057.1| putative isopentenyldiphosphate isomerase [Nocardia farcinica IFM 10152] Length = 362 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 109/298 (36%), Positives = 161/298 (54%), Gaps = 11/298 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M ++RK DH+ D DR FD H AL I +VD V+ GK+ PL Sbjct: 1 MSSNRKDDHVRHAV-DQHRDRTPVNDFDAIGFQHHALAGIDAADVDLGVDIAGKRWHTPL 59 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 I++MTGG+ + INR LAIAA +T + +A GS F D SF LR+ PH V Sbjct: 60 FINAMTGGSAAATD-INRGLAIAARETGLPVASGSLSAYFRDPGLAGSFRVLREENPHGV 118 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I+N+ A + +A +AV +L AD L +HLN +QEI+ P G+ +F +I L Sbjct: 119 VIANVNATAT-----LDQARRAVDLLAADALQIHLNAVQEIVMPEGDRSFRSWPRRIEHL 173 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 ++ + VP+++KEVG GLS + +G+ D+ GRGGT+++RIE+ R +D Sbjct: 174 AAGVPVPVIVKEVGFGLSRPTVAWLRDAGVAVADVGGRGGTNFARIENDRRPAADFSF-L 232 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 WG TP L + +ASGG+R+ +D+ K++ LGA G+A FL +D Sbjct: 233 DTWGQSTPACL-LDSAEVTGIALVASGGIRSPLDVAKALALGADATGVAGRFLATLLD 289 >gi|319893308|ref|YP_004150183.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Staphylococcus pseudintermedius HKU10-03] gi|317163004|gb|ADV06547.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Staphylococcus pseudintermedius HKU10-03] Length = 343 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+ + D + FD +H A+PE++ DEV F +S L I++ Sbjct: 7 QRKNEHVRLALAQS--DTLQSDFDRIQFVHHAIPEMNVDEVTLLPNFKALHMSHVLYINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + + N LA A+ T++ MAVGS + S+ + R+ P + +N Sbjct: 65 MTGGSEWTV-KTNEQLAQVAKATQIPMAVGSMHAALKNPAVRHSYTVAREQYPEGQIWAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 + A D +++A A+ ++ A+ L +H+N QE++ P GN F ++I+ + + Sbjct: 124 VSA-----DVTLEEAQAAIEMIHANALQIHVNAPQELVMPEGNRQFKHWLTRISEIIKGV 178 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I+ + G+ Y DI+G GGT++ IE+ R D+G +DWG Sbjct: 179 EVPVIVKEVGFGMSYDTIQQLIDVGVSYVDISGHGGTNFISIENERRQFKDMG-YLKDWG 237 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T +SL AR + +ASGG+R+ +D +K++ LGA G++ P LK + +A Sbjct: 238 QSTVVSLLEARNLSSRVHVLASGGIRHPLDAIKALRLGAEAVGMSRPILKILHEEGVEAT 297 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +E + + M LL K + EL Sbjct: 298 IEYVEDFKTQMAYIMTLLNAKNITEL 323 >gi|223934068|ref|ZP_03626018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus suis 89/1591] gi|223897259|gb|EEF63670.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus suis 89/1591] Length = 365 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 175/331 (52%), Gaps = 15/331 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F +R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L + Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + G++ D++G GGT +++IE+ R +D + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGGTDFAKIENARRTFNDY-TYLEGWG 241 Query: 243 IPTPLSLEMARPYCNEAQ--FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E + IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + AI++ + + M +LG K + EL Sbjct: 302 RFDDGLQAIKTYQWQMAEIMTMLGAKNIAEL 332 >gi|323489678|ref|ZP_08094905.1| isopentenyl pyrophosphate isomerase [Planococcus donghaensis MPA1U2] gi|323396809|gb|EGA89628.1| isopentenyl pyrophosphate isomerase [Planococcus donghaensis MPA1U2] Length = 344 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 178/331 (53%), Gaps = 14/331 (4%) Query: 7 IDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 +DHI K FDD +H+ALP + ++ + L P+ I++MTG Sbjct: 1 MDHIQFALSTG--QSKKNMFDDIRFVHQALPNTAVSDICIKPKTGDLNLRSPVFINAMTG 58 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGA 125 G + +++N LA A +T +AMAVGSQ D N +S+ + R+ P + SNLG+ Sbjct: 59 GGGQDTQQLNGLLARVARETGMAMAVGSQMAALKDANERQSYAVVRKENPDGIFFSNLGS 118 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + VQ+A AV ++GA+ L +HLN +QE+ P G+ +F +I + ++VP Sbjct: 119 -----EASVQQAKDAVDMIGANALQIHLNVVQELTMPEGDRDFRGALERIQAIKEGVNVP 173 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +++KE G G+S + D++G GGT+++ IE+ R + F+DWGIPT Sbjct: 174 VIVKETGFGISRETAVKLRDCDVSAIDVSGFGGTNFAAIENKRRQKKL--SYFEDWGIPT 231 Query: 246 -PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVA 303 P +E+ + + +ASGG+++ D++K+ +LGA GLA FLK AM + +++ Sbjct: 232 APAIVEVKSVF--DKTVLASGGIQDARDMIKAFLLGADAVGLAGSFLKVAMQEGEKQLIS 289 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 I SL ++ + M LG K + EL A+I Sbjct: 290 DIHSLYEDLAMMMTALGAKNLMELQKCPAII 320 >gi|325688649|gb|EGD30666.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK72] Length = 335 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 109/328 (33%), Positives = 171/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + + N FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR-LGYNS--FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D A QA+ L L +H+N +QE++ P G F S +A S Sbjct: 117 TNIG-----LDKPYHAAQQAIADLQPLFLQVHVNLMQELLMPEGEREFRSWSQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 QLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA G++ L + S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGISRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ +E + + + M L + +QEL Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|55820641|ref|YP_139083.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus LMG 18311] gi|55822532|ref|YP_140973.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus CNRZ1066] gi|55736626|gb|AAV60268.1| isopentenyl diphosphate isomerase [Streptococcus thermophilus LMG 18311] gi|55738517|gb|AAV62158.1| isopentenyl diphosphate isomerase [Streptococcus thermophilus CNRZ1066] Length = 335 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 164/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALK---YQSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAKG-GAVNRKLAEVASRTGILMVTGSYSAALKGE-APESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G V + D G++ V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-VDKSVDLGIK----TVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCDY---LNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 VVA + + + + M L V EL Sbjct: 288 VVAIVNGWKDDLRLIMCALDCCTVDEL 314 >gi|327459080|gb|EGF05428.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1057] Length = 335 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQSPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVATGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWHQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEAHSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-S 298 DWG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L + Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHLV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|229824270|ref|ZP_04450339.1| hypothetical protein GCWU000282_01575 [Catonella morbi ATCC 51271] gi|229786243|gb|EEP22357.1| hypothetical protein GCWU000282_01575 [Catonella morbi ATCC 51271] Length = 357 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 177/329 (53%), Gaps = 9/329 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+++ + FD +H L +S DE+D + ++ G +FP Sbjct: 6 LMAHRKADHLHLALAQQAGVQTASCFDQLRFVHHPLALLSQDEIDLTTQWAGHTHAFPFY 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ K+ + N LAI A +T +A+A GS M D S++ +RQ P + Sbjct: 66 INAMTGGS-KLTGQYNEQLAIVARETGLALAAGSASAMVKDPTVATSYQVMRQVNPDGFI 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA ++ A + + +GA+ L +HLN QE++ P G+ +F+ +I L Sbjct: 125 LANLGA-----HHSLESAQRVLEAMGANALQIHLNRPQEVVMPEGDRDFSQWLKQIERLV 179 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +D P+++KEVG G+S + + G++ D++GRGGT++ +IE R ++Q Sbjct: 180 NGLDCPVIIKEVGFGMSQQTLRCLAEVGVKTVDVSGRGGTNFIQIEDQRHETLQFQALYQ 239 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 +G T SL AR E + +ASGG+ VDI+KS+ +GA GLA FL + Sbjct: 240 -YGQTTAESLLEARVAPIELEILASGGIHQPVDIIKSLAMGARAVGLAGFFLHYLENKGL 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DA + + + +++ LLG + QEL Sbjct: 299 DATIEKVRAWQEQLRQLYLLLGARDWQEL 327 >gi|116629677|ref|YP_814849.1| isopentenyl pyrophosphate isomerase [Lactobacillus gasseri ATCC 33323] gi|238854237|ref|ZP_04644581.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 202-4] gi|282852203|ref|ZP_06261555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 224-1] gi|311110680|ref|ZP_07712077.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri MV-22] gi|116095259|gb|ABJ60411.1| Isopentenyl diphosphate isomerase [Lactobacillus gasseri ATCC 33323] gi|238833048|gb|EEQ25341.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 202-4] gi|282556622|gb|EFB62232.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 224-1] gi|311065834|gb|EFQ46174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri MV-22] Length = 341 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 184/335 (54%), Gaps = 15/335 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + ++N F + HLI ALPE + + + E G+K+S P I++M Sbjct: 7 RKEEHLALAKMFFNSNKNNDF-NHIHLIRPALPESAVRKESITTEMFGQKISAPFFINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG++ INR LA AA K + MA+GS ++ + + IKSFE+ RQ P +L +N+ Sbjct: 66 TGGSDASYT-INRRLAKAAAKENIPMALGSASILEKEIDQIKSFEIARQENPDGLLFANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 N + A + V L A+ L +HLN +QE + P G+ +F L + + + +D Sbjct: 125 -----NPTTNPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFHWLDN-LKAIRQTVD 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+ + L + D+ G GGT++++IE+ R + + +D G+ Sbjct: 179 VPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKNQKL-MFLEDIGL 237 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A +++++ Sbjct: 238 STVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFASQDTESLIV 297 Query: 304 AIESLRKEFIVSMFLLGTKRVQE-----LYLNTAL 333 AI++L+ E + L G K + E YL+T L Sbjct: 298 AIQNLKYELRLLTALFGLKDIAEADEVKYYLDTDL 332 >gi|307708223|ref|ZP_07644690.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis NCTC 12261] gi|307615669|gb|EFN94875.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis NCTC 12261] Length = 336 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 173/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE ++ GS D A SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACEILFVTGSYSAALKDP-ADDSFSVKYDHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVTEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++A+ + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALINAQDWKDKAELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + +L Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADL 315 >gi|293379310|ref|ZP_06625456.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium PC4.1] gi|292642106|gb|EFF60270.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium PC4.1] Length = 351 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 163/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+ +IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFIQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA G + L M+ Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMN 286 >gi|332523043|ref|ZP_08399295.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus porcinus str. Jelinkova 176] gi|332314307|gb|EGJ27292.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus porcinus str. Jelinkova 176] Length = 332 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 168/327 (51%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ +E+D S + G+ ++P I Sbjct: 1 MTNRKNDHIKYALK---YQSSYNSFDDIELIHCSLPQYDLEEIDLSTHYAGQDFAYPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T++ M GS + N +S++LR AP+ +L + Sbjct: 58 NAMTGGSEKG-KAVNEKLAQVAAATEIPMVTGSYSAALKNPND-QSYQLRSVAPNLLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F + + Sbjct: 116 NIGL-----DKDVNLGLQTVREMNPIFLQVHINLMQELLMPEGERYFRSWHQHLKDYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I L GI+ FDI+GRGGTS++ IE+ R +W Sbjct: 171 IPVPIILKEVGFGMDLKTITLARDLGIQTFDISGRGGTSFAYIENQRGGNK---AYLDNW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L + +E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTSQCLLNCQAISDEVEILASGGVRNPLDMIKCLVLGARAVGLSRTVLELVESYQLDE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A I ++E + M L + + EL Sbjct: 288 VIAIINGWKEELKLIMCALNCRTIAEL 314 >gi|323463645|gb|ADX75798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus pseudintermedius ED99] Length = 343 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 102/326 (31%), Positives = 173/326 (53%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+ + D + FD +H A+PE+ DEV F +S L I++ Sbjct: 7 QRKNEHVRLALAQS--DTLQSDFDRIQFVHHAIPEMDVDEVTLLPNFKALHMSHVLYINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + + N LA A+ T++ MAVGS + S+ + R+ P + +N Sbjct: 65 MTGGSEWTV-KTNEQLAQVAKATQIPMAVGSMHAALKNPAVRHSYAVAREQYPEGQIWAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 + A D +++A A+ ++ A+ L +H+N QE++ P GN F ++I+ + + Sbjct: 124 VSA-----DVTLEEAQAAIEMIHANALQIHVNAPQELVMPEGNRQFKHWLTRISEIIKGV 178 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I+ + G+ Y DI+G GGT++ IE+ R D+G +DWG Sbjct: 179 EVPVIVKEVGFGMSYDTIQQLIDVGVSYVDISGHGGTNFISIENERRQFKDMG-YLKDWG 237 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T +SL AR + +ASGG+R+ +D +K++ LGA G++ P LK + +A Sbjct: 238 QSTVVSLLEARNLSSRVHVLASGGIRHPLDAIKALRLGAEAVGMSRPILKMLHEEGVEAT 297 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +E + + M LL K + EL Sbjct: 298 IEYVEDFKTQMAYIMTLLNAKNITEL 323 >gi|227517820|ref|ZP_03947869.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX0104] gi|227074710|gb|EEI12673.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX0104] Length = 347 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 181/312 (58%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I ++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIGKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++G+GGTS+++IE+ R + ++ + DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSGQGGTSFTQIENARRKKRELSFL-DDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TALI Sbjct: 315 TTEELT-STALI 325 >gi|203288116|ref|YP_002223131.1| isopentenyl-diphosphate delta-isomerase [Borrelia recurrentis A1] gi|201085336|gb|ACH94910.1| isopentenyl-diphosphate delta-isomerase [Borrelia recurrentis A1] Length = 359 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 3/289 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K I I + ++++ + ++ H AL E+ F E+D G +S P+ ISS Sbjct: 14 NNKRQQIEICLQRENVNKSDNLLNFVNVKHDALSELDFCEIDTHESLFGYDISMPIFISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + ++N++L A + M +GS +++F IK F L++YA + L SN+ Sbjct: 74 MTGGVREG-NKLNKSLVKIANDIGIPMGLGSFKLIFKYPEYIKDFSLKKYADNIPLFSNI 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G VQL +FGV + + L D + LHLN QE++ G NF + IA S + Sbjct: 133 GVVQLR-EFGVYEIIEMNKRLEVDAVILHLNSGQELMNSKGGRNFKGIKDTIAKFCSVSN 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KE G G+S + L+ G+ Y D+AG GGT+W +E ++ DI F +WGI Sbjct: 192 LPVIVKETGFGISPDSVISLLELGVSYVDLAGSGGTNWVLVEGIKEKNLDIASCFANWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + L+L ++ + + ASGG G+DI K I LGA L G+A+ L+ Sbjct: 252 SSVLTL-LSIDESFKDKIFASGGYETGMDIAKGIALGAQLVGVAAAVLR 299 >gi|162447656|ref|YP_001620788.1| isopentenyl pyrophosphate isomerase [Acholeplasma laidlawii PG-8A] gi|161985763|gb|ABX81412.1| isopentenyl-diphosphate delta-isomerase [Acholeplasma laidlawii PG-8A] Length = 323 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/332 (31%), Positives = 178/332 (53%), Gaps = 22/332 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHINI + FD L LP++S D++D S EFLG K+ +P Sbjct: 1 MSKNRKDDHINIA---KSFKKKSNMFDKILLEGTDLPDLSMDDIDLSTEFLGMKVPYPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN L+ A+ + M GSQ +MF D ++I SF++ + +++ Sbjct: 58 INAMTGGSEKA-HKINEFLSKIADHFNLPMVTGSQSIMFKDPSSIDSFKVIRNNHKGIIV 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+ N + +++A AV + A+ L +HLN +QE++ G+ +F S+ I + Sbjct: 117 GNI-----NPNMTLEQAQVAVSTIQANALSIHLNVIQELVMNEGDRDFRLWSNHIESVVK 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ P+++K+VG GLS I+ G++Y D++G GGTS+ IES R +D Sbjct: 172 HLNKPVIVKQVGLGLSLKTIQKIKTLGVKYIDVSGSGGTSFIDIESTRSA--------KD 223 Query: 241 WGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + S++ A+ N + + ASGG+R+ +D++KS+ILGA GL+ FL Sbjct: 224 YSYLNDFSIDTAQALINLKNEKDLEIYASGGIRHPLDVIKSLILGAKACGLSKWFLDLTD 283 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V +E ++ M +LG +++L Sbjct: 284 LEFAAAVKKVEEFIEDLKKIMLILGVSSLKDL 315 >gi|241896114|ref|ZP_04783410.1| isopentenyl pyrophosphate isomerase [Weissella paramesenteroides ATCC 33313] gi|241870628|gb|EER74379.1| isopentenyl pyrophosphate isomerase [Weissella paramesenteroides ATCC 33313] Length = 346 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/327 (32%), Positives = 183/327 (55%), Gaps = 12/327 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + + + LIH++LP++ +V ++ + P I +M Sbjct: 8 RKDEHLALAEAEYRRHQPVSSLEQVRLIHQSLPDLKISDVSTAIRNENFNFTTPFYIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + RIN+ LA AA++T +AMAVGSQ V D +AI+SF + R P +++N+ Sbjct: 68 TGGSIRT-GRINQQLAEAAKETGLAMAVGSQSVALKDKDAIESFTIARDTNPDGFIMANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA Q A Q V ++GA+ L +H+N QE++ P G+ NF L + I ++ + + Sbjct: 127 GA-----GHSAQSAQQVVDMIGANALEVHVNVAQEVVMPEGDENFLWLDNIIEIIQT-VS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES--HRDLESDIGIVFQDW 241 VP+L+KEVG G+ + I+ ++G Y +I GR GT+++ IE+ +RD E + ++ DW Sbjct: 181 VPVLIKEVGFGMDATTIKKLYENGAEYVNIGGRSGTNFAVIENRRYRDKEFNYDFLY-DW 239 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G T SL A+ + A+GG++N +D+LK+ +LGA G+A FL + D + Sbjct: 240 GQTTAESLLEAQSLQQKPIIFATGGIQNPLDVLKAQVLGAKAVGVAGHFLHTTLQDGTTG 299 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ I + +++ L+G + +L Sbjct: 300 LINEITNWQQQLRKLYALVGARSANDL 326 >gi|295693040|ref|YP_003601650.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus ST1] gi|295031146|emb|CBL50625.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus ST1] Length = 338 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 178/307 (57%), Gaps = 19/307 (6%) Query: 26 FDDWHLIHRALPEISFDEVDPSV---EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA 82 FD HL+ ALPE +VDP++ E GK +S P I++MTGG+ ++IN+ L Sbjct: 27 FDQLHLLRPALPET---KVDPTILGSEMFGKNVSAPFFINAMTGGSAAS-KQINQALGQV 82 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA-PHTVLISNLGAVQLNYDFGVQKAHQAV 141 A++ +A+A+GS ++ + + + SF + + A P VLI N+ N + + Q + Sbjct: 83 AQQQNIALALGSASILAKETDQLDSFMVARAADPDGVLIVNV-----NPETPISAIKQII 137 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L AD L +HLN +QEI P G+ +F L S I + +A+D+P+++KEVG GL I Sbjct: 138 QELNADALQIHLNTIQEIAMPEGDRDFRWLDS-IKAIRTAIDLPIIIKEVGFGLDQTSIH 196 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L +GI YFD+AG GGT++++IE+ R+ SD+ + +D G+PT ++ MA + + +F Sbjct: 197 LLKVNGIEYFDVAGSGGTNFAQIENARN-ASDVSYL-EDLGLPTVVTALMA--WQEQVKF 252 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLG 320 SGG+RN +DILK + LG G+++ FL+ + + S + I + + E + + G Sbjct: 253 FVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGSTGLEQLITNWKNELAALIAVYG 312 Query: 321 TKRVQEL 327 K + L Sbjct: 313 KKDLASL 319 >gi|227878670|ref|ZP_03996585.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus JV-V01] gi|227861734|gb|EEJ69338.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus JV-V01] Length = 342 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 176/307 (57%), Gaps = 19/307 (6%) Query: 26 FDDWHLIHRALPEISFDEVDPSV---EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA 82 FD HL+ ALPE +VDP++ E GK +S P I++MTGG+ ++IN+ L Sbjct: 31 FDQLHLLRPALPET---KVDPTILGSEMFGKNVSAPFFINAMTGGSAAS-KQINQALGQV 86 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A++ +A+A+GS ++ + + + SF + R P VLI N+ N + + Q + Sbjct: 87 AQQQNIALALGSASILAKETDQLDSFMVARAEDPDGVLIVNV-----NPETPISAIKQII 141 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L AD L +HLN +QEI P G+ +F L S I + +A+D+P+++KEVG GL I Sbjct: 142 QELNADALQIHLNTIQEIAMPEGDRDFRWLDS-IKAIRTAIDLPIIIKEVGFGLDQTSIH 200 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L +GI YFD+AG GGT++++IE+ R+ SD+ +D G+PT ++ MA + + +F Sbjct: 201 LLKVNGIEYFDVAGSGGTNFAQIENARN-ASDVS-YLEDLGLPTVVTALMA--WQEQVKF 256 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLG 320 SGG+RN +DILK + LG G+++ FL+ + + S + I + + E + + G Sbjct: 257 YVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGSTGLEQLITNWKNELAALIAVYG 316 Query: 321 TKRVQEL 327 K + L Sbjct: 317 KKDLASL 323 >gi|313890605|ref|ZP_07824233.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121122|gb|EFR44233.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 341 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 171/327 (52%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ +E+D S + G+ ++P I Sbjct: 1 MTNRKNDHIKYALK---YQSSYNSFDDIELIHCSLPQYDLEEIDLSTHYAGQDFAYPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA AE T + M GS + N +S++LR AP+ +L + Sbjct: 58 NAMTGGSEKG-KAVNEKLAQVAEATGIPMVTGSYSAALKNPND-QSYQLRSIAPNLLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G + N + G+Q + + L +H+N +QE++ P G F + + Sbjct: 116 NIG-LDKNVNLGLQTVREMNPIF----LQVHINLMQELLMPEGERQFRSWRQHLKDYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I L GI+ FDI+GRGGTS++ IE+ R +W Sbjct: 171 IPVPIILKEVGFGMDLKTINLARDLGIQTFDISGRGGTSFAYIENQRGGHK---AYLDNW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L + ++ + +ASGG+RN +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTGQCLLNCQAISDDVEILASGGVRNPLDMIKCLVLGAKAVGLSRTVLELVESYPLEE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A I ++E + M L + + EL Sbjct: 288 VIAIINGWKEELRLIMCALDCRTIAEL 314 >gi|332364386|gb|EGJ42160.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK355] Length = 335 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/329 (32%), Positives = 170/329 (51%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K ++N LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSKKG-GQVNEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + Sbjct: 116 ATNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWHQHLTDYG 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D Sbjct: 171 QRLEVPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL +P +E + +ASGG+R+ +D++K+++LGA G++ L + S Sbjct: 228 DWGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGISRTMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|315641785|ref|ZP_07896789.1| isopentenyl diphosphate isomerase [Enterococcus italicus DSM 15952] gi|315482460|gb|EFU72999.1| isopentenyl diphosphate isomerase [Enterococcus italicus DSM 15952] Length = 348 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 182/329 (55%), Gaps = 19/329 (5%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ K DR F D HLIHR+ P+++ D++ + E L P I++ Sbjct: 2 NRKDEHVSL-AKAFHKDRPSDF-DHVHLIHRSFPQVAVDDISITSEMASLPLKTPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN LA A +T +AMA GS + D + SF + R+ P ++++N Sbjct: 60 MTGGSEKT-KQINEQLATLARETSLAMATGSVSIALKDPSVQDSFTIVRKTNPTGMILAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA +++A +A+ +L A+ L +H+N QE++ P G+ +F IA ++S + Sbjct: 119 VGAGS-----SLEQAQRAIDLLEANALQIHVNAPQELVMPEGDRDFRYWLEDIAKIASTL 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+++KEVG G++ I+ + GI D++G+GGTS+++IE+ R + G + +G Sbjct: 174 SIPVIVKEVGFGMTRETIQQLIDCGITSIDVSGQGGTSFTQIENARRKNREFGYL-DSYG 232 Query: 243 IPTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + T SL E+ PY +FIASGG+R DI K++ LGA+ G++ L + Sbjct: 233 LSTVQSLLEANEVPYPY----EFIASGGIRQAYDIFKALALGANAVGISGTILTHLLTKG 288 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D + ++ + E + G+K + Sbjct: 289 LDETILLVQQWQSELTTLYAMTGSKTTAQ 317 >gi|256843266|ref|ZP_05548754.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 125-2-CHN] gi|256850377|ref|ZP_05555805.1| isopentenyl pyrophosphate isomerase [Lactobacillus crispatus MV-1A-US] gi|262046475|ref|ZP_06019437.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus MV-3A-US] gi|293380930|ref|ZP_06626964.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 214-1] gi|312978157|ref|ZP_07789901.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus CTV-05] gi|256614686|gb|EEU19887.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 125-2-CHN] gi|256712774|gb|EEU27767.1| isopentenyl pyrophosphate isomerase [Lactobacillus crispatus MV-1A-US] gi|260573346|gb|EEX29904.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus MV-3A-US] gi|290922505|gb|EFD99473.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 214-1] gi|310894875|gb|EFQ43945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus CTV-05] Length = 338 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 176/307 (57%), Gaps = 19/307 (6%) Query: 26 FDDWHLIHRALPEISFDEVDPSV---EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA 82 FD HL+ ALPE +VDP++ E GK +S P I++MTGG+ ++IN+ L Sbjct: 27 FDQLHLLRPALPET---KVDPTILGSEMFGKNVSAPFFINAMTGGSAAS-KQINQALGQV 82 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A++ +A+A+GS ++ + + + SF + R P VLI N+ N + + Q + Sbjct: 83 AQQQNIALALGSASILAKETDQLDSFMVARAEDPDGVLIVNV-----NPETPISAIKQII 137 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L AD L +HLN +QEI P G+ +F L S I + +A+D+P+++KEVG GL I Sbjct: 138 QELNADALQIHLNTIQEIAMPEGDRDFRWLDS-IKAIRTAIDLPIIIKEVGFGLDQTSIH 196 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L +GI YFD+AG GGT++++IE+ R+ SD+ +D G+PT ++ MA + + +F Sbjct: 197 LLKVNGIEYFDVAGSGGTNFAQIENARN-ASDVS-YLEDLGLPTVVTALMA--WQEQVKF 252 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLG 320 SGG+RN +DILK + LG G+++ FL+ + + S + I + + E + + G Sbjct: 253 YVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGSTGLEQLITNWKNELAALIAVYG 312 Query: 321 TKRVQEL 327 K + L Sbjct: 313 KKDLASL 319 >gi|306831546|ref|ZP_07464704.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426331|gb|EFM29445.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 332 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+N RK +HI K FDD LIH + P+ E+D F G+ FP Sbjct: 1 MIN-RKDEHIKYALK---YQSPYNSFDDMELIHHSFPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + + S+ ++ P +L Sbjct: 57 INAMTGGSEKG-RAVNQKLAQIAQATGLVMVTGSYSAALKNPHD-DSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + Y+ G+Q H+ + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-IDKPYELGLQTIHEMQPIF----LQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNRS---YLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA GL+ LK S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGLSRAILKLVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I + + + M L K + EL Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAEL 314 >gi|325956904|ref|YP_004292316.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus 30SC] gi|325333469|gb|ADZ07377.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus 30SC] gi|327183683|gb|AEA32130.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1118] Length = 338 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/268 (37%), Positives = 157/268 (58%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D VE K++S P I++MTGG+ + + +N+ L A K Sbjct: 27 FDQLHLLRPALPETKVDTQILGVEMFKKRVSAPFFINAMTGGSQES-KVVNKALGHVAAK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + + SF + R P VLI N+ N + V+ ++ +H L Sbjct: 86 EKIALALGSASILAKEEDQLDSFYVARNEDPDGVLIINI-----NPETPVEATNKIIHEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L I L +D+P+++KEVG GL I Sbjct: 141 NADALQIHLNTVQEIAMPEGDRNFFWLDH-IKALRDQIDLPIIIKEVGFGLDEATIHTLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +GI YFDIAG GGT++++IE+ R+ D+ + +D G+ T +S MA+ + FI S Sbjct: 200 NAGIEYFDIAGSGGTNFAQIENARN-SRDVSYL-EDLGLSTVVSALMAKK--EDVNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +D+LK ++LG G+++ FL+ Sbjct: 256 GGVRNPLDVLKGLVLGGQYVGISNVFLQ 283 >gi|203284582|ref|YP_002222322.1| isopentenyl-diphosphate delta-isomerase [Borrelia duttonii Ly] gi|201084025|gb|ACH93616.1| isopentenyl-diphosphate delta-isomerase [Borrelia duttonii Ly] Length = 359 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 3/289 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 + K I I + ++++ + ++ H AL E+ F E+D G ++ P+ ISS Sbjct: 14 NNKRQQIEICLQRENVNKSDNLLNFVNVKHDALSELDFCEIDTHESLFGYDIAMPIFISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + ++N++L A + M +GS +++F IK F L++YA + L SN+ Sbjct: 74 MTGGVREG-NKLNKSLVKIANDIGIPMGLGSFKLIFKYPEYIKDFSLKKYADNIPLFSNI 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G VQL +FGV + + L D + LHLN QE++ G NF + IA S + Sbjct: 133 GVVQLR-EFGVYEIIEMNKRLEVDAVILHLNSGQELMNSKGGRNFKGIKDTIAKFCSVSN 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KE G G+S + L+ G+ Y D+AG GGT+W +E ++ DI F +WGI Sbjct: 192 LPVIVKETGFGISPDSVISLLELGVSYVDLAGSGGTNWVLVEGIKEKNLDIASCFANWGI 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + L+L ++ + + ASGG G+DI K I LGA L G+A+ L+ Sbjct: 252 SSVLTL-LSIDESFKDKIFASGGYETGMDIAKGIALGAQLVGVAAAVLR 299 >gi|323141763|ref|ZP_08076633.1| isopentenyl-diphosphate delta-isomerase, type 2 [Phascolarctobacterium sp. YIT 12067] gi|322413752|gb|EFY04601.1| isopentenyl-diphosphate delta-isomerase, type 2 [Phascolarctobacterium sp. YIT 12067] Length = 358 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 110/326 (33%), Positives = 170/326 (52%), Gaps = 11/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI + G D +H LPEI+ + SVE LGK+L P I ++ Sbjct: 10 RKLEHIQYAL-ELGDGPAATHLADLRFLHNCLPEINPADFVLSVEILGKRLRLPFFIDAI 68 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TG + + E INR LA A +T + MAVGSQ D + I S+ + R+ ++I N+ Sbjct: 69 TGSTDAVTE-INRKLAQVAARTGIGMAVGSQFGAVRDGSGIASYTVVREELAEGLVIGNI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A+ +A AV +L AD L +HLN QE+ G+ + L + + + A+ Sbjct: 128 SALATP-----AQAQAAVDMLQADALEVHLNAAQELWMAEGDKDTCGLLANLVQIRDAVS 182 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KE GCG+++ EL L+ G FD AG GGT++ IE+ R ++ F WG+ Sbjct: 183 VPVIVKETGCGIAAEQYELLLEQGFTAFDCAGAGGTNFPAIEAKRQ-GVELTEEFAAWGV 241 Query: 244 PTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 PT S L+ + A +ASGG+R+ D+ ++ LGA G+ +P L+ ++ DA Sbjct: 242 PTCWSLLDAQQTLPQNALLLASGGIRSAGDVARAFALGADAVGITTPILRLIIEQGVDAA 301 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 +ESL + M LLG +EL Sbjct: 302 ADYVESLAEGLQKYMLLLGCLTPKEL 327 >gi|299822975|ref|ZP_07054861.1| isopentenyl-diphosphate delta-isomerase [Listeria grayi DSM 20601] gi|299816504|gb|EFI83742.1| isopentenyl-diphosphate delta-isomerase [Listeria grayi DSM 20601] Length = 347 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 109/332 (32%), Positives = 183/332 (55%), Gaps = 25/332 (7%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + K +N++ F + +I ++P+ + ++D S + FPL Sbjct: 12 RKDEHVTLALK-----QNQELAGDTFKEIEVIGMSVPKYDYADIDLSTTIADIAIPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + IN NLA A T + MAVGSQ + +F++ R+ P+ VL Sbjct: 67 INAMTGGS-RHTKEINGNLAEIAAATGIPMAVGSQSSALKNAELADTFQIARKRNPNGVL 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+ + V +AV ++ A+ L +H+NP+QE++ G+ NFA I Sbjct: 126 FANVSP-----EIKVADGLRAVEMIEANALQIHINPVQELVMKEGDRNFAHWLKSIETYQ 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES--HRDLESDIGIV 237 + +P+++KEVG G++ EL + G++ D+ G+GGT+++ IE+ RD D Sbjct: 181 KELSIPIIVKEVGFGITRETAELLKRIGVKTIDVGGKGGTNFAAIENDRRRDHAYD---Y 237 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMD 296 DWGI TP SL + + F+ASGG++N +D+LKS+ILGA+ G++ P LK Sbjct: 238 LTDWGITTPQSL-LDCQLVTDVDFLASGGVKNPLDMLKSLILGANAVGMSGPLLLKLKEH 296 Query: 297 SSDAVVAAIESLRKEFIVSMFLLG-TKRVQEL 327 + +A IE+ KE + S+FLL K +QE+ Sbjct: 297 GVEKTIAQIEAW-KEQLTSLFLLANAKDIQEV 327 >gi|314951592|ref|ZP_07854638.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133A] gi|313596286|gb|EFR75131.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133A] Length = 354 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|69246580|ref|ZP_00604010.1| Isopentenyl-diphosphate delta-isomerase [Enterococcus faecium DO] gi|257881518|ref|ZP_05661171.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,502] gi|257890740|ref|ZP_05670393.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,410] gi|293560303|ref|ZP_06676800.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1162] gi|293567764|ref|ZP_06679105.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1071] gi|294620916|ref|ZP_06700117.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium U0317] gi|314938974|ref|ZP_07846239.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a04] gi|314943475|ref|ZP_07850242.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133C] gi|314948232|ref|ZP_07851626.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0082] gi|314991545|ref|ZP_07857021.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133B] gi|314994878|ref|ZP_07860005.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a01] gi|68195188|gb|EAN09644.1| Isopentenyl-diphosphate delta-isomerase [Enterococcus faecium DO] gi|257817176|gb|EEV44504.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,502] gi|257827100|gb|EEV53726.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,410] gi|291589349|gb|EFF21156.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1071] gi|291599527|gb|EFF30543.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium U0317] gi|291605753|gb|EFF35190.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1162] gi|313590860|gb|EFR69705.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a01] gi|313593829|gb|EFR72674.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133B] gi|313597847|gb|EFR76692.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133C] gi|313641683|gb|EFS06263.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a04] gi|313645365|gb|EFS09945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0082] Length = 354 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ +RQ PH +I+N Sbjct: 60 MTGGSEKT-KKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|227892526|ref|ZP_04010331.1| isopentenyl pyrophosphate isomerase [Lactobacillus ultunensis DSM 16047] gi|227865647|gb|EEJ73068.1| isopentenyl pyrophosphate isomerase [Lactobacillus ultunensis DSM 16047] Length = 344 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 13/304 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + D + E K +S P I++MTGG+ K + +N+ L A K Sbjct: 32 FDQLHLLRPALPETNVDPTILTTEMFNKSVSAPFFINAMTGGSPKS-KIVNQALGKVAAK 90 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + + SF + R P +LI V +N + V+ H+ + L Sbjct: 91 EKIALALGSASILAKEDDQLDSFYVARSKNPDGILI-----VNVNPETPVKAIHKIIQEL 145 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ +F L + I + + +++P+++KEVG GL I + Sbjct: 146 NADALQIHLNTVQEIAMPEGDRDFHWLDN-IKEICNQVNIPIIIKEVGFGLDQNTIHILK 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 GI+YFDIAG GGT++++IE+ R+ ++D+ +D G+PT +S MA+ + FI S Sbjct: 205 NEGIQYFDIAGSGGTNFAQIENARN-KNDVS-YLEDIGLPTVISALMAKK--EQVNFIVS 260 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+RN +DILK + L G+++ FL+ + D + I S +K+ + + G K Sbjct: 261 GGVRNPLDILKGLTLSGQYIGISNVFLQEFNQNGIDGLENLIASWKKQLAALIAIYGKKD 320 Query: 324 VQEL 327 + L Sbjct: 321 LASL 324 >gi|258615046|ref|ZP_05712816.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium DO] Length = 347 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ D+ K FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLA--KAFHDKQKNEFDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ +RQ PH +I+N Sbjct: 60 MTGGSEKT-KKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 T SL A + +ASGG+RN DI K++ LGA+ G + L M+ Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMN 286 >gi|300859988|ref|ZP_07106076.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TUSoD Ef11] gi|300850806|gb|EFK78555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TUSoD Ef11] Length = 323 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 179/308 (58%), Gaps = 11/308 (3%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++T + Sbjct: 2 RFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKETGLL 60 Query: 90 MAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + A+ Sbjct: 61 VATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLFQANA 115 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E G+ Sbjct: 116 LQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLTSIGV 175 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + SGG+R Sbjct: 176 QAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGSGGVR 234 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 N +DI+K + LGA G+A L M + + +A ++ ++E + LLG K +E Sbjct: 235 NSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKKTTEE 294 Query: 327 LYLNTALI 334 L +TAL+ Sbjct: 295 LT-STALV 301 >gi|121535823|ref|ZP_01667623.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosinus carboxydivorans Nor1] gi|121305595|gb|EAX46537.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosinus carboxydivorans Nor1] Length = 354 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 17/332 (5%) Query: 1 MVNDRKIDHIN---IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M RK+DH+ + P F+D LIH LPE+ + ++D S G L Sbjct: 1 MRKSRKLDHLRYALTLADGP----TTTGFEDIKLIHNCLPELDWGDIDLSSSLAGLPLRH 56 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPH 116 P++++++TGG + + R+N LA A +T AMAVGSQ F +S+++ R+ P Sbjct: 57 PVIVNAITGGTEE-VTRVNAALADFARRTGTAMAVGSQYAAFEYPEVKESYKIVRKINPD 115 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 ++ +NLGA + ++A AV ++GA+ + +HLN QEII G F IA Sbjct: 116 GIVFANLGA-----NATPEQARLAVEMIGANAIQIHLNAAQEIIMAEGERRFTGYLENIA 170 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + +A+ VP++ KEVGCG++ +G+R D+ G GGT++ IE+ R + + Sbjct: 171 AIVAAVTVPVIAKEVGCGIAREQATQLTLTGVRAIDVGGAGGTNFIAIEAART-AATLAD 229 Query: 237 VFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F WGIPT +S +E+A I SGG+R +K +++G + G+ASP +K Sbjct: 230 DFLVWGIPTAVSAIEVASVLPKGVDLIVSGGIRTPAAAVKGLVIGGTAVGIASPLIKMLT 289 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + VA E + + LLG + V E Sbjct: 290 EQGMEQTVAWFERFLTDMKRLLLLLGARTVGE 321 >gi|322374887|ref|ZP_08049401.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C300] gi|321280387|gb|EFX57426.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C300] Length = 333 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS V D SF ++ P+ +L Sbjct: 58 INAMTGGSEKGKE-INQKLAQVAEACGILFVTGSYSVALKDPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIILKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + M L + +L Sbjct: 288 EVIGIVQGWKEDLCLIMCALNCATIADL 315 >gi|227555012|ref|ZP_03985059.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis HH22] gi|227175838|gb|EEI56810.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis HH22] Length = 347 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 180/312 (57%), Gaps = 11/312 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++ Sbjct: 22 FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKE 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T + +A GS D + +++ +R+ P ++ +N+GA GV++A +A+ + Sbjct: 81 TGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E Sbjct: 136 QANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLT 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D++ +GGTS+++IE+ R + ++ DWG T +SL ++ + + + S Sbjct: 196 SIGVQAADVSCQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K Sbjct: 255 GGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKK 314 Query: 323 RVQELYLNTALI 334 +EL +TAL+ Sbjct: 315 TTEELT-STALV 325 >gi|325978454|ref|YP_004288170.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178382|emb|CBZ48426.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 332 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 170/328 (51%), Gaps = 15/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+N RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MIN-RKDEHIKYALK---YQSPYNSFDDMELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + + S+ ++ P +L Sbjct: 57 INAMTGGSEKG-RAVNQKLAQIAQATGLVMVTGSYSAALKNPHD-DSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + Y+ G+Q H+ + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-IDKPYELGLQTIHEMQPIF----LQIHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNRS---YLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I + + + M L K + EL Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAEL 314 >gi|302389720|ref|YP_003825541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosediminibacter oceani DSM 16646] gi|302200348|gb|ADL07918.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosediminibacter oceani DSM 16646] Length = 349 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/327 (33%), Positives = 183/327 (55%), Gaps = 13/327 (3%) Query: 5 RKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK++HI + + + RN F D L+H L E++ DE+D S +L P++I++ Sbjct: 7 RKMEHIKYSLLLEKKLKRN--VFSDITLLHNCLSEVNLDEIDISTNLQNLRLEKPIIINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG + + INR LA A + +AMAVGSQR+ D +A SF++ R+ P ++ +N Sbjct: 65 ITGGFSFALA-INRELAKIAREFGLAMAVGSQRIAIKDKSAQASFKVVREENPEGLIFAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA D +++ + V ++ AD + +HLN QEI+ G FA I +++ + Sbjct: 124 IGA-----DASLEEVAEVVEMINADAVQIHLNTPQEIVMAEGRKCFAGTVDNIKRIAAGV 178 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G++ + + + G++ D+ G GGT + IE+ R+ ++ + + WG Sbjct: 179 KVPVIVKEVGFGIAREEARMLVDCGVKIIDVGGAGGTDFIAIENRRNRKNAV-TTLEGWG 237 Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 IPTP+SL E+ + A IASGGL+ G+D+ KS+ LGA GLA L + A Sbjct: 238 IPTPVSLIEVISEIGDRADIIASGGLKTGLDVAKSLALGAKAAGLAGTVLYKLLKGGPVA 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + +E SM ++G + EL Sbjct: 298 LRKYLRQVERELRYSMAMVGANNLSEL 324 >gi|40882374|dbj|BAD07378.1| IPP isomerase [Actinoplanes sp. A40644] Length = 363 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK DH+ + FDD +H AL I +V + F G + PL Sbjct: 1 MIANRKDDHVRFAAEQQRRPDGYNQFDDVSFVHHALAGIDRTDVSLTTRFGGIEWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ K INR+LAIAA++T V +A GS F+D +F +R+ P + Sbjct: 61 INAMTGGSAKT-GLINRDLAIAAQETGVPIATGSMSAYFADDAVADTFSVMRRENPKGFI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+N+ N + V KA +A+ ++ AD L +HLN +QE + P G+ F+ +I + Sbjct: 120 IANV-----NANATVDKARRAIDLMEADALQIHLNSIQETVMPEGDRAFSSWGPQIGRIV 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VP+++KEVG GLS ++ G+ D+AG GGT+++RIE+ R +D Sbjct: 175 AGAGVPVIVKEVGFGLSRETLDRLRDLGVTVADVAGSGGTNFARIENDRRDRADYSF-LN 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG TP L A+ + SGG+R+ +D+++++ LGAS G + FL +D Sbjct: 234 GWGQSTPACLLDAQGVG--IPVLGSGGVRHPLDVVRALALGASAVGASGLFLTTVLDGGP 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++A I + M LG + EL LI Sbjct: 292 PALIALISGWLDQLKALMTALGARNPAELTRCDVLI 327 >gi|313885713|ref|ZP_07819462.1| isopentenyl-diphosphate delta-isomerase, type 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312619078|gb|EFR30518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 356 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 106/342 (30%), Positives = 182/342 (53%), Gaps = 16/342 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+ + + DR F+D +H++L ++ D +D S + + S+P Sbjct: 3 LAQTRKNDHVRLALEQQRKDR-VSAFNDLRFVHQSLNQVRQDHLDLSSHWANQDHSWPFY 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+ MTGG K ++ N+ LA A +T + MA GS + S SF++ R+Y P+ + Sbjct: 62 INGMTGGTEK-TKQYNQKLAQVAHETGLPMATGSVSIALSQPQVADSFQVVREYNPNGFV 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA ++ A +AV +L A+ L +HLN QE++ P G+ ++ I+ + Sbjct: 121 MANLGA-----HHNLENAKRAVDLLDANALQIHLNIPQEVVMPEGDRDYGMWLDNISQIV 175 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + + +P+++KEVG G+S I + G+ D++GRGGT++ +IE+ R D FQ Sbjct: 176 AHLGLPVIVKEVGFGMSRETIADLISVGVENIDVSGRGGTNFVQIENDRRTRLD----FQ 231 Query: 240 D---WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 D WG TP SL A + ++A+ +ASGG+R+ +D++K+ LGA GL+ FL Sbjct: 232 DLGNWGQTTPESLLEALAFQDQARILASGGIRSYLDMVKAYALGAKAVGLSGRFLALVDQ 291 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S + V + R M +LG + ++ + +I Q Sbjct: 292 LSIEDCVQVVNDWRDSIAHMMLMLGVESIEAIATCPVVINGQ 333 >gi|218296797|ref|ZP_03497503.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermus aquaticus Y51MC23] gi|218242886|gb|EED09420.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermus aquaticus Y51MC23] Length = 335 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 176/325 (54%), Gaps = 7/325 (2%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H+ + + + + L ++AL ++ EVD + FLGK L P LI Sbjct: 5 ERKRKHLEACLHGEVAFQKTTTGLERFRLRYQALSGLALSEVDLTTPFLGKTLKAPFLIG 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 +MTGG ERIN LA AAE V M +GS R++ A++SF++R+ AP +L++N Sbjct: 65 AMTGGEENG-ERINLALAEAAEALGVGMMLGSGRIVLERPEALRSFQVRKVAPKALLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG QL +G + + V +L AD L LH+NPLQE +Q G+T+F L +++ + Sbjct: 124 LGLAQLR-RYGREDLVRLVEMLEADALALHVNPLQEAVQ-RGDTDFRGLLARLRA-LLPL 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 P+L+KEVG GLS + L L+ + D+AG GGTSW+R+E + Sbjct: 181 PFPVLVKEVGHGLSR-EAALALRGLPLAAVDVAGAGGTSWARVEEWVRYGEVRHPELCEM 239 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+PT ++ R E IASGG+ G D K++ LGA L +A P L+PA+ ++A Sbjct: 240 GVPTAQAILEVREVLPEVPLIASGGVYTGTDAAKALALGADLVAVARPLLRPALMGAEAA 299 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQE 326 A I +E ++F +G +R E Sbjct: 300 AAWIADYLEELRTALFAVGARRPVE 324 >gi|302557474|ref|ZP_07309816.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptomyces griseoflavus Tu4000] gi|302475092|gb|EFL38185.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptomyces griseoflavus Tu4000] Length = 367 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 110/336 (32%), Positives = 178/336 (52%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK H+ + FDD +H AL I +V F G + PL Sbjct: 1 MIAERKDAHVRFATEQHRRHTGHNQFDDVSFVHHALAGIDRSDVSTVTRFGGMEWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ K E INR+LAIAA +T V++A GS F+D + +F +R+ P + Sbjct: 61 INAMTGGSPKTGE-INRDLAIAARETGVSIATGSISPYFADESVADTFSVMRKENPGGFI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ N + V+KA +AV +L AD L +H+N +QE + P G+ FA +I ++ Sbjct: 120 LANV-----NANATVEKARRAVDLLQADALQIHVNVIQETVMPEGDRLFASWGPRIEEIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVPL++KEVG GLS + + G+R D++G GGT ++RIE+ R D Sbjct: 175 AGVDVPLIVKEVGFGLSRETLLRLREMGVRVADVSGSGGTDFARIENDRRDRPDYSY-LN 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 WG T L A+ +ASGG+R+ +D+++++ LGAS G + FL+ +D + Sbjct: 234 GWGQSTAACLLDAQGVG--LPVLASGGVRHPLDVVRALALGASAVGASGLFLRTVLDGGA 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A+++ + S + M LG +L L+ Sbjct: 292 PALISLLSSWIDQLTALMTALGAPTPADLTRCDVLV 327 >gi|312871695|ref|ZP_07731783.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 3008A-a] gi|312874216|ref|ZP_07734250.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2052A-d] gi|311090286|gb|EFQ48696.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2052A-d] gi|311092637|gb|EFQ50993.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 3008A-a] Length = 341 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 174/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIQTNFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q V L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLVNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + I+ M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLIILMALFGINKLDDV 323 >gi|294786244|ref|ZP_06751498.1| isopentenyl-diphosphate delta-isomerase, type 2 [Parascardovia denticolens F0305] gi|315225777|ref|ZP_07867565.1| isopentenyl-diphosphate delta-isomerase [Parascardovia denticolens DSM 10105] gi|294485077|gb|EFG32711.1| isopentenyl-diphosphate delta-isomerase, type 2 [Parascardovia denticolens F0305] gi|315119909|gb|EFT83041.1| isopentenyl-diphosphate delta-isomerase [Parascardovia denticolens DSM 10105] Length = 402 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 122/375 (32%), Positives = 185/375 (49%), Gaps = 46/375 (12%) Query: 2 VNDRKIDHINIVCK------DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 ++ RK DH+ + + +P D IH+ALPEI+ D+VD S G Sbjct: 22 ISSRKDDHVRLAARIRSQEVEPYQLAVWDELDQCEFIHQALPEIAVDQVDISSTVAGIAQ 81 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQY 113 S P I++MTGG +N LA A +T VAMA+GS ++ ++ F LR+ Sbjct: 82 SSPFFINAMTGGTVGT-NALNSQLAAVASRTGVAMALGSMSILVKKPE-VQGFYRTLRKD 139 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 P+ I+NLGA + V+ A V + A L LHLN QEI+ P G+ +F + Sbjct: 140 NPNVNFIANLGA-----EHSVEAAQLVVETVDAQALQLHLNAAQEIVMPEGSRDFRGWTD 194 Query: 174 KIALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I + AMD VP+++KEVG GLS +E G+R+ D+AG+GGT++ RIE+ R Sbjct: 195 HIGRIVDAMDKKGVPVIVKEVGFGLSRETVERLYSLGVRWVDLAGKGGTNFIRIENERRK 254 Query: 231 ES--DIGI----------------------VFQDWGIPTPLSLEMARPYCN---EAQFIA 263 E+ +G + WGI T SL AR + IA Sbjct: 255 EALRRLGCQGEARNELQLHGSAHADSLDFSYLRSWGISTLRSLLEARSVGERFGDLHIIA 314 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTK 322 SGG+RN +D++K + GA GL+ FLK + + VA ++ ++ + M LLG + Sbjct: 315 SGGVRNPLDVVKYLASGADCVGLSGFFLKAIQEEGVEGTVALVDEWKEHIRLLMALLGVR 374 Query: 323 RVQELYLNTALIRHQ 337 +Q+L + +L+ Q Sbjct: 375 DIQDLRSSASLVYPQ 389 >gi|315038488|ref|YP_004032056.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1112] gi|312276621|gb|ADQ59261.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1112] Length = 338 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 157/268 (58%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D VE K++S P I++MTGG+ + + +N+ L A K Sbjct: 27 FDQLHLLRPALPETKVDTQILGVEMFKKRVSAPFFINAMTGGSQES-KVVNKALGHVAAK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + + SF + R P VLI N+ N + V+ ++ +H L Sbjct: 86 EKIALALGSASILAKEEDQLDSFYVARNEDPDGVLIINI-----NPETPVEATNKIIHEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L I L +D+P+++KEVG GL I Sbjct: 141 NADALQIHLNTVQEIAMPEGDRNFFWLDH-IKALRDQIDLPIIIKEVGFGLDEATIHTLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +GI YFDIAG GGT++++IE+ R+ D+ + ++ G+ T +S MA+ + FI S Sbjct: 200 NAGIEYFDIAGSGGTNFAQIENARN-SRDVSYL-ENLGLSTVVSALMAKK--EDVNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +D+LK ++LG G+++ FL+ Sbjct: 256 GGVRNPLDVLKGLVLGGQYVGISNVFLQ 283 >gi|307711409|ref|ZP_07647825.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK321] gi|307616782|gb|EFN95966.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK321] Length = 336 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 173/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DEVD S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEVDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE ++ GS D + SF ++ P+ ++ Sbjct: 58 INAMTGGSEKGKE-INQKLAQVAEACEILFVTGSYSAALKDPSD-ASFSVKADHPNLLIG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + + G+Q + +L L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-LDKPVELGLQTIDEMTPLL----LQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + SGG+RN +D++K ++ GA GL+ L+ + + + Sbjct: 228 WGQSTMQALLNAQEWKDKVGLLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIENYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + EL Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIAEL 315 >gi|312869883|ref|ZP_07730022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus oris PB013-T2-3] gi|311094468|gb|EFQ52773.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus oris PB013-T2-3] Length = 347 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 163/289 (56%), Gaps = 10/289 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K FD LIH ALPE + +VD + + +L+ P + Sbjct: 8 RKNEHLSLARKYYDQAHASHPFDQVRLIHTALPETAVADVDITSPLTKQIRLNAPFYFEA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ + INR LA A K +AMA GS + D A +SF +R P ++I+N Sbjct: 68 MTGGSQAALT-INRQLARIAAKYHLAMATGSVSIALKDPAARESFTVIRDENPDGIVIAN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L + + A A+ +LGAD L LHLN QE++ P G+ F L + I L++A+ Sbjct: 127 LSS-----GASLTDARAAIDLLGADALELHLNAAQELVMPEGDRRFFWLDN-IRELATAL 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++KEVG G++ +D+ ++GI +++GRGGT+++ IE+ R+ + D + Q WG Sbjct: 181 DVPVIVKEVGFGMNKVDVAKLAQTGIEAINVSGRGGTNFALIENRRNHKQDFAALAQ-WG 239 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP S+ AR IASGG+ + VD++K+ LGAS G+A FL Sbjct: 240 QTTPESILEARAAKTGLPIIASGGISSPVDLIKAAALGASSCGVAGYFL 288 >gi|229084600|ref|ZP_04216870.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-44] gi|228698750|gb|EEL51465.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-44] Length = 349 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 170/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI G R F D +H++LP S++ V + LS P+ I++M Sbjct: 6 RKLDHIEYALS-TGQSRIHGFHD-IAFVHQSLPNSSYENVTCETQIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + IN LA AA+ +AMAVGSQ D S+ + R+ + ++ +NL Sbjct: 64 TGGGGEQTLYINEQLAYAAKHHNLAMAVGSQMAALKDEREANSYRIVRKVNQNGIVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + + + Sbjct: 124 GS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEKIVLSAE 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ D+ G+GGT+++ +E+ R + F DWGI Sbjct: 179 VPIIVKEVGFGMSKETVQQLADVGVTAVDVGGQGGTNFAAVENER--RQRMLSYFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A N IASGG++ +D+ K+I LGA A FL+ + D + ++ Sbjct: 237 QTVASIIEASSTNNNLSLIASGGIQTALDVAKAIALGAQTTAFAGYFLRILITDGIEKLI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG + EL Sbjct: 297 DEIELLHTDLQFIMTALGASTLSEL 321 >gi|312872905|ref|ZP_07732965.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2062A-h1] gi|311091427|gb|EFQ49811.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2062A-h1] Length = 341 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 179/332 (53%), Gaps = 24/332 (7%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPE--ISFDEVDPSVEFLGKKLSFP 58 RK DHI++ K P D F +LI ALPE IS D + + F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIQTT--FFHKIASAP 59 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 I +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P Sbjct: 60 FFIEAMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTG 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L++N+ + + A Q V L AD L +HLN +QE G+ +F L + I Sbjct: 119 ILLANINPLT-----KPKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILE 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 173 IQQLVNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLF 231 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 232 LDDLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQD 291 Query: 298 SD--AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A+++ I+ L+ + I+ M L G ++ ++ Sbjct: 292 KNGTALISEIQKLKYQLIILMALFGINKLDDV 323 >gi|319946227|ref|ZP_08020467.1| isopentenyl-diphosphate delta-isomerase [Streptococcus australis ATCC 700641] gi|319747609|gb|EFV99862.1| isopentenyl-diphosphate delta-isomerase [Streptococcus australis ATCC 700641] Length = 338 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 175/329 (53%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK +HI + + PG + FD+ LIH +LP I DEVD + F G+ +P Sbjct: 1 MTTNRKDEHIRLALEQTPGYNS----FDEVELIHSSLPTIDLDEVDVTTHFAGRDWDYPF 56 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K E INR LA AE + GS D S+ ++ P + Sbjct: 57 YINAMTGGSAKGGE-INRKLAQVAEACGILFVTGSYSAALKDPQD-SSYRVKDLHPDLLF 114 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G + + G++ + + L LH+N +QE++ P G +F + +A + Sbjct: 115 ATNIG-IDKPLELGLRTIEETQPLF----LQLHVNLMQELLMPEGERSFRNWQEHLADYA 169 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPL+LKEVG G+ + I+ ++ G+R DI+GRGGTS++ IE+ R Sbjct: 170 KQLPVPLVLKEVGFGMDAGTIQRAMELGVRTVDISGRGGTSFAYIENRRGGNRS---YLN 226 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T +L A+P ++ + +ASGG+R+ +D++K+++LGA GL+ L+ Sbjct: 227 DWGQTTVQALLGAQPLMDQVEVLASGGVRHPLDMIKALVLGAKGVGLSRTILELVETKPI 286 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V+A + + +++ + M L + + +L Sbjct: 287 DEVIAQVNAWKEDLRLIMCALSCQTLADL 315 >gi|256847335|ref|ZP_05552781.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715999|gb|EEU30974.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus coleohominis 101-4-CHN] Length = 342 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 185/325 (56%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K ++ FD L+ ALPE + +V P+++ + +P +M Sbjct: 8 RKNEHLSLAEKFYDQTHHQHPFDQVRLLPNALPETAVADVKPAIKIGRLHMQWPFYFEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+++ +++N LA A+KT +AMA GS + F SF+ +R+ P ++I+NL Sbjct: 68 TGGSDQA-KKVNTALARVAQKTGLAMATGSLSITFKLPQFNDSFKTVRKINPDGIVIANL 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA + V++A QA+ +L AD L +HLN QEI+ P G +F ++ I L +D Sbjct: 127 GA-----NVTVEQAQQAIDLLHADALEIHLNSTQEIVMPEGERSFR-WAANIKKLIQHLD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ ++ K G+ +I+GRGGT++ +IE R+ ++ ++Q WG+ Sbjct: 181 VPIIVKEVGFGMTKENLTSLKKLGVSLVNISGRGGTNFVKIEDRRNHDASFADLYQ-WGL 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVV 302 TP SL A+ + IASGG+ +D++K+ ++GA G+A FL + + D ++ Sbjct: 240 TTPESLFEAQ-MVKDLTVIASGGITCPLDVIKAGVMGAQAVGVAGYFLHEYYQNGEDGLL 298 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++E M +LG + +L Sbjct: 299 QTVLNWQEELKRIMTILGCQHFNDL 323 >gi|319940308|ref|ZP_08014659.1| isopentenyl-diphosphate delta-isomerase [Streptococcus anginosus 1_2_62CV] gi|319810495|gb|EFW06834.1| isopentenyl-diphosphate delta-isomerase [Streptococcus anginosus 1_2_62CV] Length = 338 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + D FDD LIH +LP+ DE+D + +F G+ FP Sbjct: 1 MNKNRKDEHIRYALE---YDSPYNSFDDMELIHCSLPKYDLDEIDLTTQFAGRDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS ++ S+ ++Q P+ +L Sbjct: 58 INAMTGGSEKG-KGINQRLAQVAEACGILFVTGSYSAALNNPTD-DSYTVKQDRPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D QA+ L L +H+N +QE++ P G +F + + + Sbjct: 116 TNIG-----LDKPYSSGQQAITDLHPLFLQVHVNLMQELLMPEGERSFKTWRAHLKDYAE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ IE GIR D++GRGGTS++ IE+ R D D Sbjct: 171 QSTVPVVLKEVGFGMDLATIETAYDLGIRTVDLSGRGGTSFAYIENRRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+P ++ + SGG+R +D++K+ +LGA GL+ L+ S D Sbjct: 228 WGQSTLQALLNAQPMMDKMDILVSGGVRQPLDMVKAFVLGAKAVGLSRTMLELIETHSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ + S +++ + M LG + ++EL Sbjct: 288 EVITIVNSWKEDLCLIMCALGCQNLREL 315 >gi|328945442|gb|EGG39594.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1087] Length = 335 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 16/329 (4%) Query: 1 MVNDRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M +RK DHI + PG + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRPGYNS----FDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPF 57 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 YINAMTGGSQKG-GQINEKLAQVAESCGLLFVTGSYSAALKNPSD-PSYRVAAGRPNLLL 115 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 ATNIG-----LDKHYQAAQQAVADLKPLFLQVHVNLMQELLMPEGEREFRSWLQHLTDYS 170 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D Sbjct: 171 QRLDLPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLN 227 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T SL + +E + +ASGG+R+ +D++K+++LGA GL+ L + S Sbjct: 228 DWGQSTLQSLLALQLLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHSV 287 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ +E + + + M L + +QEL Sbjct: 288 EEVIDIVEGWKSDLRLIMCALSCRNLQEL 316 >gi|331701428|ref|YP_004398387.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus buchneri NRRL B-30929] gi|329128771|gb|AEB73324.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus buchneri NRRL B-30929] Length = 344 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 183/327 (55%), Gaps = 16/327 (4%) Query: 5 RKIDHINIVCK--DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ K P +D + F ++ +LP+ D++D + + L+ P I Sbjct: 8 RKDEHVSLAEKFYQP-VDNS---FAGVRFVNASLPKYRLDDIDLTTQLGSLSLTTPFYIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +M+GG+ + E INR LA+ A+ +AMAVGSQ V SD SF + RQ P+ ++++ Sbjct: 64 AMSGGSPRTKE-INRRLAVVAKACGLAMAVGSQSVGLSDPEVRDSFSIVRQTNPNGIVLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA + V+ A +AV ++ AD L LH+N QE++ P G+ F + + A++++ Sbjct: 123 NIGA-----NHSVEDAQKAVEMIAADALELHINVAQELVMPEGDRGFHFIDNIQAIIAN- 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S I + G++Y ++ G GGT+++ IE+ R D+ DW Sbjct: 177 VGVPVIVKEVGFGMSQATISQLVDLGVKYVNVGGHGGTNFAAIENFRRSSKDMA-YLTDW 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 G+ T SL AR + + IA+GG+++ +D+ K + LGAS G+A +L + SD Sbjct: 236 GLSTVESLFEARAFSDRLGIIAAGGVKSPLDVAKCLTLGASAVGVAGYWLHEIIHKSDNE 295 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + + M +L + V +L Sbjct: 296 IIDDVREWQYGLKTIMLMLNCRTVADL 322 >gi|116492689|ref|YP_804424.1| isopentenyl pyrophosphate isomerase [Pediococcus pentosaceus ATCC 25745] gi|116102839|gb|ABJ67982.1| isopentenyl-diphosphate delta-isomerase [Pediococcus pentosaceus ATCC 25745] Length = 327 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 113/327 (34%), Positives = 172/327 (52%), Gaps = 17/327 (5%) Query: 5 RKIDHINIVCK--DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +HI++ K P FD L+ ALPE EV G K+ P I Sbjct: 8 RKDEHISLAEKFYSPTASAG---FDTIRLLPNALPETGISEVSLETTLAGLKMPLPFFIQ 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++N LA A++T +AMAVGSQ V +F++ R+ P ++++ Sbjct: 65 AMTGGS-AYTAKLNARLAKIAQETDLAMAVGSQSVALKYPELADTFKIVRETNPQGLIMA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA AV +L A+ L LH+N QE++ P G+ F D IA + S Sbjct: 124 NVGA-----DASVAKAQAAVDMLQANALQLHINVAQELVMPEGDRTF-DYLDHIAEIVSN 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++K VG G++ D K G+++ D+ GRGGT++ +IE+ R D + + Sbjct: 178 LKVPVIVKAVGAGMTHQDALALKKVGVKFIDVGGRGGTNFIQIENARRHTKDFDFM-TSF 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G+ T SL+ + A+GG+RN DI+KS+ LGA G+A FL + DA Sbjct: 237 GLTTVESLK--SITVDGLSITATGGIRNSSDIIKSLALGADNVGIAGYFLHQLLHHDDAF 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +V IE ++ + + LLG K + EL Sbjct: 295 MVEMIEQMKYQLKSLLVLLGVKSINEL 321 >gi|326803269|ref|YP_004321087.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aerococcus urinae ACS-120-V-Col10a] gi|326650721|gb|AEA00904.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aerococcus urinae ACS-120-V-Col10a] Length = 350 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 176/328 (53%), Gaps = 11/328 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI + D +++ FD +H +LP I D+V + G++ FP I Sbjct: 1 MKNRKDDHIKLA--DWQYNQSPTDFDAIRFVHHSLPHIDADQVQLDTQVFGQEFPFPFFI 58 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ + + IN A A +T + MA GS + SF++ RQ P +I Sbjct: 59 NAMTGGS-EWTKAINEKFATVARETGLMMATGSVSQAIKNPQTADSFQIVRQTNPQGFII 117 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G +N+ G++ A +A+ + A+ L +HLN QE+ P G+ +F + I + Sbjct: 118 ANVG---MNH--GLEGAKKALEITDANALAIHLNTPQELAMPEGDRHFQAVKDNIQAIVE 172 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D P+++KEVG G+S IE L G++ D++G+GGT++ IE+ R D+ + Q Sbjct: 173 GVDRPVMVKEVGFGMSRETIEELLDLGVQTIDVSGQGGTNFIAIENERRSHKDMDYMTQ- 231 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +SL A+ + N+ IASGG++ + +L S+ LG G++ FL ++ Sbjct: 232 WGQSTAISLLEAQAFKNQVDLIASGGVKTPLHVLISLALGVKAVGMSGQFLHLVLNHGVQ 291 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +E + + + M L ++++ +L Sbjct: 292 ETIDWVEEFKNQVRLLMTLTNSQKLSDL 319 >gi|89099122|ref|ZP_01172001.1| isopentenyl pyrophosphate isomerase [Bacillus sp. NRRL B-14911] gi|89086252|gb|EAR65374.1| isopentenyl pyrophosphate isomerase [Bacillus sp. NRRL B-14911] Length = 351 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 11/327 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI + FDD IH++LP+ + D+V E G LS P+LI+ Sbjct: 4 SKRKWDHIEFALSTG--QKRIAGFDDIDFIHQSLPDSAVDQVKIETEIGGLTLSSPILIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + +IN+ LA+AA +T +AMAVGSQ D +S+++ RQ P ++I Sbjct: 62 AMTGGGGEKTLKINQELAMAAAETGLAMAVGSQMAALKDPAERESYKIVRQENPKGIVIG 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A +A+ ++ A+ L +HLN +QE+ P G+ +F D +I + Sbjct: 122 NLGS-----EADAEQAKRAIEMIEANALQIHLNVVQELTMPEGDRDFRDALRRIESICKN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G S +G+ D+ G GGT+++RIE+ R + F W Sbjct: 177 VHVPVIVKEVGFGTSRESAAKLAAAGVSAIDVGGFGGTNFARIENER--RERLLSFFNGW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 GIPT S+ + I SGG++ D K+I GA +A LK M Sbjct: 235 GIPTATSILEVKAEETGVSIIGSGGIQTAFDAAKTIACGADAAAMAGYLLKILMSEGHVQ 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ I +L +E M LG + +++L Sbjct: 295 LIKEIHTLHEELAFIMAALGAETIKDL 321 >gi|325912640|ref|ZP_08175023.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 60-B] gi|325478061|gb|EGC81190.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 60-B] Length = 341 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 178/330 (53%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPE--ISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE IS D + + F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAE---FSGINLIRPALPESKISSDSIQTT--FFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q + L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFYWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLINVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL FIASGG+ N ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLKEIPHVNFIASGGINNSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + I+ M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLIILMALFGINKLDDV 323 >gi|238623520|emb|CAX48659.1| putative type II isopentenyl diphosphate delta isomerase [Streptomyces anulatus] Length = 363 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/324 (33%), Positives = 176/324 (54%), Gaps = 11/324 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DH+ + + + FD+ +H AL I +V + F G PL Sbjct: 1 MISQRKDDHVRLAVEQQQALDGRNQFDEVSFVHHALAGIDRPDVSLATTFAGIAWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ INR+LAIAA +T V +A GS F D + +F LRQ P + Sbjct: 61 INAMTGGSTH-TGAINRDLAIAARETGVPIASGSMSAYFKDPSCADTFRVLRQENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ N V KA +A+ +L AD L +H+N +QE + P G+ +F+ +I ++ Sbjct: 120 MANI-----NATASVDKARRAIGLLEADALQIHINTVQETVMPEGDRSFSSWVPQIERIT 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+DVP+++KEVG GLS + G+R D+ GRGGT ++RIE+ R +D Sbjct: 175 AAVDVPVIVKEVGFGLSRETVLTLRNLGVRVADLGGRGGTDFARIENGRRELADYAY-LH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG+ T L AR +ASGG+R+ +D+++++ LGAS G++ FL+ MD Sbjct: 234 GWGLSTAACLLDARD--PGIPVLASGGVRHPLDVVRALALGASGVGVSGGFLRTLMDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTK 322 A+VA I + + +LG++ Sbjct: 292 TALVAQISTWLDQLGALQTMLGSR 315 >gi|306825824|ref|ZP_07459163.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432185|gb|EFM35162.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 333 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSKKGKE-INQKLAQVAEACGILFVTGSYSAALKDPTD-GSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + D G+Q VL L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-LDKPVDLGLQTVQAMDPVL----LQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VPL+LKEVG G+ + I + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPLVLKEVGFGMDAKTIGRAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + +L Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADL 315 >gi|288905464|ref|YP_003430686.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus UCN34] gi|288732190|emb|CBI13755.1| putative isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus UCN34] Length = 332 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+N RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MIN-RKDEHIKYALK---YQSPYNSFDDMELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + + S+ ++ P +L Sbjct: 57 INAMTGGSEKG-RAVNQKLAQIAQATGLVMVTGSYSAALKNPHD-DSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + Y+ G+Q H+ + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-IDKPYELGLQTIHEIQPIF----LQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPIILKEVGFGMDLKTIEEAHKLGIKTVDISGRGGTSFAYIENQRGHNRS---YLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I + + + M L K + EL Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAEL 314 >gi|86475803|dbj|BAE78980.1| Type II isopentenyl diphosphate isomerase [Streptomyces sp. KO-3988] Length = 363 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 165/309 (53%), Gaps = 12/309 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK DH+ + + + FDD +H AL I +V + F G PL Sbjct: 1 MIAQRKDDHVQLAVEQQQQHSGRNQFDDVSFVHHALAGIDRPDVRLATSFAGLSWQAPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ K INR+L IAA +T V +A GS F D + +F LR+ P + Sbjct: 61 INAMTGGSEKT-GIINRDLGIAARETGVPIASGSMSAYFKDPDCADTFSVLRKENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ N V +A +AV ++ AD L +H+N +QE + P G+ +F+ +I ++ Sbjct: 120 LANV-----NATASVDRARRAVDLIRADALQIHVNTVQETVMPEGDRSFSSWVPQIEKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG GLS + L G+R D+ GRGGT ++RIE+ R D Sbjct: 175 AGVDVPVIVKEVGFGLSRETVRLLESLGVRAADLGGRGGTDFARIENGRRPLGDYAF-LH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 WG T L A+ +ASGG+R+ +D+ +++ LGAS G++ FL+ +D D Sbjct: 234 GWGQSTAACLLDAQDA--PIPVLASGGVRHPLDVARALALGASGVGVSGTFLRTLLD--D 289 Query: 300 AVVAAIESL 308 V A I + Sbjct: 290 GVAALIARI 298 >gi|306833697|ref|ZP_07466824.1| isopentenyl-diphosphate delta-isomerase [Streptococcus bovis ATCC 700338] gi|304424467|gb|EFM27606.1| isopentenyl-diphosphate delta-isomerase [Streptococcus bovis ATCC 700338] Length = 332 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+N RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MIN-RKDEHIKYALK---YQSPYNSFDDIELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + + S+ ++ P +L Sbjct: 57 INAMTGGSEKG-RAVNQKLAQIAQATGLVMVTGSYSAALKNPHD-DSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + Y+ G+Q H+ + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-IDKPYELGLQTIHEMQPIF----LQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M P++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPAPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNRS---YLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIIKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I + + + M L K + EL Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAEL 314 >gi|228990610|ref|ZP_04150575.1| Isopentenyl-diphosphate delta-isomerase [Bacillus pseudomycoides DSM 12442] gi|228769136|gb|EEM17734.1| Isopentenyl-diphosphate delta-isomerase [Bacillus pseudomycoides DSM 12442] Length = 349 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 169/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI G R F D +H++LP S++ + E LS P+ I++M Sbjct: 6 RKLEHIEYAL-STGQSRIHGFHD-IAFVHQSLPNSSYESITFETEIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG IN LA A++ +AMAVGSQ D S+ + R+ P+ ++ +NL Sbjct: 64 TGGGGDHTLHINEQLAHVAKQHNLAMAVGSQMAALKDEKEASSYRIVRKVNPNGIVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + ++ Sbjct: 124 GS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEQIVTSSP 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ D+ G GGT+++ +E+ R + F DWGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLTNVGVTAVDVGGYGGTNFAAVENER--RKRMLSYFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A IASGG++ +D+ K+I LGA A FL+ M D + ++ Sbjct: 237 QTVASIIEASSTNKNLSLIASGGIQTALDVAKAIALGARATAFAGYFLRILMNDGTQKLM 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG + + EL Sbjct: 297 DEIELLHTDLQFIMTALGARTLSEL 321 >gi|319645245|ref|ZP_07999478.1| isopentenyl-diphosphate delta-isomerase [Bacillus sp. BT1B_CT2] gi|317393054|gb|EFV73848.1| isopentenyl-diphosphate delta-isomerase [Bacillus sp. BT1B_CT2] Length = 310 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 164/288 (56%), Gaps = 11/288 (3%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +VD S + LS P+ I++MTGG K INR LA AA +T + +AVGSQ D Sbjct: 3 QVDTSTKIGELFLSSPIFINAMTGGGGKATFEINRALARAAAQTGIPVAVGSQMSALKDP 62 Query: 103 NAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + S+E+ R+ ++ +NLG+ + V++A +AV ++ AD L +HLN +QEI+ Sbjct: 63 DERPSYEIVRKENMKGLVFANLGS-----EATVEQAKRAVDMIEADMLQIHLNVIQEIVM 117 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P G+ NF +I + ++ VP+ +KEVG G+S G++ D+ G GGT++ Sbjct: 118 PEGDRNFTGRLRRIEDICRSVSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNF 177 Query: 222 SRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 S+IE +L D + F D WGI T SL + IASGG+++ +D+ KSI LG Sbjct: 178 SKIE---NLRRDKAVEFFDQWGISTAASLAEVSSISGDRPIIASGGIQDALDLAKSIALG 234 Query: 281 ASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 AS G+A FLK S +A+ A IESL ++F M +LG + +++L Sbjct: 235 ASAAGMAGYFLKVLTASGEEALAAEIESLIEDFKRIMTVLGCRTIEQL 282 >gi|259500609|ref|ZP_05743511.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners DSM 13335] gi|302191298|ref|ZP_07267552.1| isopentenyl pyrophosphate isomerase [Lactobacillus iners AB-1] gi|312875629|ref|ZP_07735630.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2053A-b] gi|259167993|gb|EEW52488.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners DSM 13335] gi|311088883|gb|EFQ47326.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2053A-b] Length = 341 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 110/330 (33%), Positives = 174/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIKTTFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q + L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFYWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLINVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + I+ M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLIILMALFGINKLDDV 323 >gi|259503454|ref|ZP_05746356.1| isopentenyl diphosphate isomerase [Lactobacillus antri DSM 16041] gi|259168532|gb|EEW53027.1| isopentenyl diphosphate isomerase [Lactobacillus antri DSM 16041] Length = 347 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 164/289 (56%), Gaps = 10/289 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K FD L+H ALPE++ +VD V G+ +LS P + + Sbjct: 8 RKNEHLSLARKYYDQAHASHPFDQVRLVHTALPEMAVTDVDLKVPLAGQLQLSAPFYLEA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ + INR LA A K ++AMA GS + D A SF +R+ P ++I+N Sbjct: 68 MTGGSQTALT-INRQLARLAAKHRLAMATGSVSIALKDPTARASFTVIREENPDGIVIAN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L + + A AV +L AD L LHLN QE++ P G+ F L + + L++A+ Sbjct: 127 LSS-----GASLADARAAVELLDADALELHLNAAQELVMPEGDRRFFWLDN-LRELAAAL 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G++ D+ ++G++ +++GRGGT+++ IE+ R+ D + Q WG Sbjct: 181 TVPVIVKEVGFGMNKTDVAKLAQAGVQAINVSGRGGTNFALIENRRNHGEDFSSLAQ-WG 239 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP +L AR IASGG+ + +D++K+ LGAS G+A FL Sbjct: 240 QTTPEALLEARAAKTGRPIIASGGISSPLDVIKAGALGASSCGVAGYFL 288 >gi|171778298|ref|ZP_02919504.1| hypothetical protein STRINF_00346 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282998|gb|EDT48422.1| hypothetical protein STRINF_00346 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 332 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 14/325 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K FDD LIHR+LP+ E+D F G+ FP I++ Sbjct: 3 NRKDEHIKYALK---YQSPYNSFDDMELIHRSLPDYDLSEIDLHTHFAGRDFDFPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K + +NR LA A+ T + M GS + S+ + P +L +N+ Sbjct: 60 MTGGSEKA-KAVNRKLAQVAQATGLVMVTGSYSAALKNPGD-DSYPSKADYPDLLLATNI 117 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G + Y+ G++ + + L +H+N +QE++ P G F +A ++ M Sbjct: 118 G-IDKPYELGLKTIEEMQPIF----LQVHVNLMQELLMPEGEREFCSWKKHLADYATKMP 172 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP++LKEVG G+ IE GI+ FDI+GRGGTS++ IE+ R D DWG Sbjct: 173 VPVILKEVGFGMDLKTIETAYDLGIKTFDISGRGGTSFAYIENQR---GDNRSYLNDWGQ 229 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL A+ ++ + +ASGG+R+ +D++K ++LGA GL+ L+ + V+ Sbjct: 230 TTVQSLLNAQSMVDKVEILASGGVRHPLDMVKCLVLGAKAVGLSRTVLELVEKYPVEKVI 289 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I + + + M L K +++L Sbjct: 290 DIINGWKDDLRLIMCALNCKTIEDL 314 >gi|309806220|ref|ZP_07700234.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 03V1-b] gi|308167367|gb|EFO69532.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 03V1-b] Length = 341 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/330 (33%), Positives = 173/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIKTTFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q V L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLVNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + + M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLVTLMALFGINKLDDV 323 >gi|307710531|ref|ZP_07646967.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK564] gi|307618684|gb|EFN97824.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK564] Length = 336 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 170/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA A+ + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSGKGRE-INQKLAQVADACGILFVTGSYSAALKDPTD-ASFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ + V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLRTVEEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDVKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++A+ + SGG+RN +D++K ++ GA GL+ L+ + S + Sbjct: 228 WGQSTMQALINAQDWKDKAELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVEIYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + +L Sbjct: 288 EVIDTVQGWKDDLRLIMCALNCATIADL 315 >gi|225860416|ref|YP_002741925.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae Taiwan19F-14] gi|225727025|gb|ACO22876.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae Taiwan19F-14] gi|327390801|gb|EGE89141.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA04375] Length = 336 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGFQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|319651363|ref|ZP_08005492.1| isopentenyl pyrophosphate isomerase [Bacillus sp. 2_A_57_CT2] gi|317396894|gb|EFV77603.1| isopentenyl pyrophosphate isomerase [Bacillus sp. 2_A_57_CT2] Length = 353 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/332 (34%), Positives = 182/332 (54%), Gaps = 11/332 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI G + N +D IH++LP+ D+ D LS P+ I++M Sbjct: 6 RKWDHIQHALA-TGQNSNTGL-EDIAFIHQSLPDAFLDQADLGTSIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + +INR+LA+AA T +AMAVGSQ D + +S+ + R+ P+ ++I NL Sbjct: 64 TGGGGERTVQINRDLALAARSTGLAMAVGSQMSALKDPSEAESYRVVRRENPYGIIIGNL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + + +A AV ++ AD L +HLN +QE+ P G+ +F +I + S + Sbjct: 124 GS-----EATIDQAKAAVDMIEADALQIHLNVVQELTMPEGDRDFRGALKRIEHIVSHSE 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ + + +G+ DI G GGT++SRIE+ R + F +WGI Sbjct: 179 VPVVVKEVGFGMNKETVSMLASAGVTAIDIGGFGGTNFSRIENAR--RERLLTFFNEWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT +S+ A + IASGG+++ +I K+I LGA G+A FLK M +A++ Sbjct: 237 PTAVSIAEAVSLEKDIAVIASGGIQSSHEIAKAIALGAGAAGMAGYFLKVLMKEGLEALI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 I ++ E V M LG + +L + +I Sbjct: 297 EEINNMHTELKVLMTALGAANIAQLQQSPIII 328 >gi|307704246|ref|ZP_07641165.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK597] gi|307622157|gb|EFO01175.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK597] Length = 336 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 170/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE++ S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHASLPLYDLDEINLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D A SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDP-ADDSFSVKSDHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVDEMNPLLLQVHVNVMQELLMPEGERKFRCWQSHLADYSQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYDLGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETHTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + EL Sbjct: 288 EVIDIVQGWKADLRLIMCALNCATIAEL 315 >gi|90961659|ref|YP_535575.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius UCC118] gi|227890747|ref|ZP_04008552.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius ATCC 11741] gi|90820853|gb|ABD99492.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus salivarius UCC118] gi|227867685|gb|EEJ75106.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius ATCC 11741] gi|300214464|gb|ADJ78880.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus salivarius CECT 5713] Length = 348 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/326 (31%), Positives = 181/326 (55%), Gaps = 11/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K + + D+ LI+ LPE++ ++D +GK + P I+++ Sbjct: 7 RKNEHLSLAEKFFKTQSSNQL-DEVQLIYSNLPELNLSDIDIRSTLVGKDIPVPFFINAI 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 TGG+++ + IN L+ A KT + MA GSQ + + +F ++RQ P+ L+ NL Sbjct: 66 TGGSSQT-DDINYKLSTVAAKTNIPMACGSQSIALKYPSLSPNFSKIRQLNPNGFLLGNL 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA +F V A ++ A+ + LHLN QE++ P G+T F I + + Sbjct: 125 GAGHSYSNFNV-----AQQMIDANAMELHLNVSQELVMPEGDTEFV-WKDNIREIVNNSS 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 PLL+K VG GL+ M I+ G++Y D++G+GGT++ IE+ R + ++ + QD G+ Sbjct: 179 FPLLVKGVGQGLTPMTIKELADIGVKYIDLSGKGGTNFIEIENRRRKQKELAFL-QDIGM 237 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T SL A+ + F ASGG+RN +DI+K ++LGA G++ FL + +++++ Sbjct: 238 TTAQSLVAAKLVDEDISFTASGGIRNSLDIVKCLVLGADNVGISGLFLHILLRQGTESLI 297 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY 328 I +L+ E M +LG K + +L+ Sbjct: 298 EYITNLKIEIKKIMLMLGCKNIDDLH 323 >gi|58337455|ref|YP_194040.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus NCFM] gi|58254772|gb|AAV43009.1| isopentenyl diphosphate isomerase [Lactobacillus acidophilus NCFM] Length = 339 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 159/273 (58%), Gaps = 12/273 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D + + K +S P I++MTGG++K + IN+ L A + Sbjct: 27 FDQLHLLRPALPETKVDINVLATKMFNKNVSAPFFINAMTGGSDKS-KIINQALGRIANE 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +A+A+GS ++ + + SF + R P+ +LI+N+ N + VQ VH L Sbjct: 86 ENIALALGSTSILAKEKEQLDSFYIARIEDPNGILIANV-----NPETPVQTVKDIVHEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +H+N +QEI P G+ NF L++ I + + +D+P+++KEVG GL I + Sbjct: 141 HADALQIHINTIQEIAMPEGDRNFFWLNN-IKEIRAEIDIPIIIKEVGFGLDQNTIHILK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 GI YFDIAG GGT++++IE+ R+ + D+ +D G+PT +S MA+ + FI S Sbjct: 200 NEGISYFDIAGSGGTNFAQIENARN-KYDVS-YLEDIGLPTVISALMAQK--EQVDFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 GG+RN +D+LK + LG G+++ FL+ D Sbjct: 256 GGVRNPLDVLKGLTLGGQYVGISNVFLQKFNDQ 288 >gi|227904091|ref|ZP_04021896.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus ATCC 4796] gi|227868110|gb|EEJ75531.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus ATCC 4796] Length = 343 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 159/273 (58%), Gaps = 12/273 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D + + K +S P I++MTGG++K + IN+ L A + Sbjct: 31 FDQLHLLRPALPETKVDINVLATKMFNKNVSAPFFINAMTGGSDKS-KIINQALGRIANE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +A+A+GS ++ + + SF + R P+ +LI+N+ N + VQ VH L Sbjct: 90 ENIALALGSTSILAKEKEQLDSFYIARIEDPNGILIANV-----NPETPVQTVKDIVHEL 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +H+N +QEI P G+ NF L++ I + + +D+P+++KEVG GL I + Sbjct: 145 HADALQIHINTIQEIAMPEGDRNFFWLNN-IKEIRAEIDIPIIIKEVGFGLDQNTIHILK 203 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 GI YFDIAG GGT++++IE+ R+ + D+ +D G+PT +S MA+ + FI S Sbjct: 204 NEGISYFDIAGSGGTNFAQIENARN-KYDVS-YLEDIGLPTVISALMAQK--EQVDFIVS 259 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 GG+RN +D+LK + LG G+++ FL+ D Sbjct: 260 GGVRNPLDVLKGLTLGGQYVGISNVFLQKFNDQ 292 >gi|293364810|ref|ZP_06611527.1| isopentenyl-diphosphate delta-isomerase [Streptococcus oralis ATCC 35037] gi|307703059|ref|ZP_07640006.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus oralis ATCC 35037] gi|291316260|gb|EFE56696.1| isopentenyl-diphosphate delta-isomerase [Streptococcus oralis ATCC 35037] gi|307623452|gb|EFO02442.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus oralis ATCC 35037] Length = 333 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 167/328 (50%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS D SF ++ P +L Sbjct: 58 INAMTGGSKKGKE-INQKLAQVAEACGILFVTGSYSAALKDPTD-DSFSVKSSHPKLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVQEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + M L + +L Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADL 315 >gi|15902385|ref|NP_357935.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae R6] gi|116515768|ref|YP_815862.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae D39] gi|149018082|ref|ZP_01834541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP23-BS72] gi|32129628|sp|Q8DR48|IDI2_STRR6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|122279252|sp|Q04M86|IDI2_STRP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15457899|gb|AAK99145.1| Isopentenyl diphosphate isomerase [Streptococcus pneumoniae R6] gi|116076344|gb|ABJ54064.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae D39] gi|147931646|gb|EDK82624.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP23-BS72] Length = 336 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|149003486|ref|ZP_01828360.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS69] gi|237649352|ref|ZP_04523604.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CCRI 1974] gi|237821530|ref|ZP_04597375.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CCRI 1974M2] gi|147758422|gb|EDK65421.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS69] Length = 336 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQMHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLE 279 >gi|168485526|ref|ZP_02710034.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1087-00] gi|225858239|ref|YP_002739749.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae 70585] gi|254803428|sp|C1C5C3|IDI2_STRP7 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183571090|gb|EDT91618.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1087-00] gi|225720747|gb|ACO16601.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 70585] gi|332204406|gb|EGJ18471.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA47901] Length = 336 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|15900307|ref|NP_344911.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TIGR4] gi|111657158|ref|ZP_01407938.1| hypothetical protein SpneT_02001623 [Streptococcus pneumoniae TIGR4] gi|148996795|ref|ZP_01824513.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP11-BS70] gi|149012128|ref|ZP_01833237.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP19-BS75] gi|168576779|ref|ZP_02722637.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae MLV-016] gi|182683349|ref|YP_001835096.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CGSP14] gi|221231255|ref|YP_002510407.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae ATCC 700669] gi|298230948|ref|ZP_06964629.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254645|ref|ZP_06978231.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502184|ref|YP_003724124.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TCH8431/19A] gi|307067040|ref|YP_003876006.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] gi|20978500|sp|Q97SH8|IDI2_STRPN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|226707321|sp|B2ILS5|IDI2_STRPS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803429|sp|B8ZLF5|IDI2_STRPJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14971854|gb|AAK74551.1| FMN-dependent dehydrogenase family protein [Streptococcus pneumoniae TIGR4] gi|147757370|gb|EDK64409.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP11-BS70] gi|147763730|gb|EDK70664.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP19-BS75] gi|182628683|gb|ACB89631.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CGSP14] gi|183577581|gb|EDT98109.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae MLV-016] gi|220673715|emb|CAR68211.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae ATCC 700669] gi|298237779|gb|ADI68910.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TCH8431/19A] gi|301793632|emb|CBW36015.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae INV104] gi|306408577|gb|ADM84004.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] Length = 336 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|301300763|ref|ZP_07206947.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851613|gb|EFK79313.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 348 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 103/326 (31%), Positives = 182/326 (55%), Gaps = 11/326 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K + + D+ LI+ LPE++ ++D +GK + P I+++ Sbjct: 7 RKNEHLSLAEKFFKTQSSNQL-DEVQLIYSNLPELNLSDIDIRSTLVGKDIPVPFFINAI 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 TGG+++ + IN L+ A KT + MA GSQ + + +F ++RQ P+ L+ NL Sbjct: 66 TGGSSQT-DDINYKLSTVAAKTNIPMACGSQSIALKYPSLSPNFSKIRQLNPNGFLLGNL 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA +F V A ++ A+ + LHLN QE++ P G+T F I + ++ Sbjct: 125 GAGHSYSNFNV-----AQQMIDANAMELHLNVSQELVMPEGDTEFM-WKDNIREIVNSSS 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 PLL+K VG GL+ M I+ G++Y D++G+GGT++ IE+ R + ++ + QD G+ Sbjct: 179 FPLLVKGVGQGLTPMTIKELADIGVKYIDLSGKGGTNFIEIENRRRKQKELAFL-QDIGM 237 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T SL A+ + F ASGG++N +DI+K ++LGA G++ FL + +++++ Sbjct: 238 TTAQSLVAAKLVDEDISFTASGGIKNSLDIVKCLVLGADNVGISGLFLHILLRQGTESLI 297 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY 328 I +L+ E M +LG K + +L+ Sbjct: 298 EYITNLKIEIKKIMLMLGCKNIDDLH 323 >gi|331266990|ref|YP_004326620.1| Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus oralis Uo5] gi|326683662|emb|CBZ01280.1| Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus oralis Uo5] Length = 333 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 171/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSEKGRE-INQKLAQVAEACGILFVTGSYSAALKDPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + ++ G+Q + +L L +H+N +QE++ P G F + S +A S Sbjct: 116 TNIG-LDKPFELGLQTVQEMNPLL----LQVHVNVMQELLMPEGERKFRNWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIVLKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + +L Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADL 315 >gi|332202290|gb|EGJ16359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA41317] Length = 336 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLE 279 >gi|325912109|ref|ZP_08174507.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 143-D] gi|325476059|gb|EGC79227.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 143-D] Length = 341 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 110/330 (33%), Positives = 173/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIKTTFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q + L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLINVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEIPHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + I+ M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLIILMALFGINKLDDV 323 >gi|148994464|ref|ZP_01823665.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP9-BS68] gi|168482618|ref|ZP_02707570.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1873-00] gi|168488081|ref|ZP_02712280.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP195] gi|169832980|ref|YP_001693896.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae Hungary19A-6] gi|225853959|ref|YP_002735471.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae JJA] gi|225856121|ref|YP_002737632.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae P1031] gi|303255736|ref|ZP_07341779.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae BS455] gi|303259459|ref|ZP_07345436.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP-BS293] gi|303262990|ref|ZP_07348924.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS292] gi|303263543|ref|ZP_07349466.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS397] gi|303267347|ref|ZP_07353206.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS457] gi|303269848|ref|ZP_07355593.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS458] gi|147927213|gb|EDK78248.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP9-BS68] gi|168995482|gb|ACA36094.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae Hungary19A-6] gi|172043711|gb|EDT51757.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1873-00] gi|183573034|gb|EDT93562.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP195] gi|225723080|gb|ACO18933.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae JJA] gi|225726081|gb|ACO21933.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae P1031] gi|301801299|emb|CBW33979.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae INV200] gi|302597296|gb|EFL64399.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae BS455] gi|302635881|gb|EFL66382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS292] gi|302639393|gb|EFL69851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP-BS293] gi|302640616|gb|EFL71018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS458] gi|302643118|gb|EFL73406.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS457] gi|302647316|gb|EFL77540.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS397] gi|332075235|gb|EGI85705.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA17570] gi|332203550|gb|EGJ17617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA47368] Length = 336 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLE 279 >gi|168494573|ref|ZP_02718716.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC3059-06] gi|183575505|gb|EDT96033.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC3059-06] Length = 336 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLE 279 >gi|309809860|ref|ZP_07703710.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 2503V10-D] gi|308169812|gb|EFO71855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 2503V10-D] Length = 341 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 112/332 (33%), Positives = 178/332 (53%), Gaps = 24/332 (7%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPE--ISFDEVDPSVEFLGKKLSFP 58 RK DHI++ K P D F +LI ALPE IS D + + F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIQTT--FFHKIASAP 59 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P Sbjct: 60 FFIEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTG 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L++N+ + + A Q + L AD L +HLN +QE G+ +F L + I Sbjct: 119 ILLANINPLT-----KPKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFYWLDN-ILE 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 173 IQQLINVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLF 231 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 232 LDDLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQD 291 Query: 298 SD--AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A+++ I+ L+ + + M L G ++ ++ Sbjct: 292 KNGTALISEIQKLKYQLVTLMALFGINKLDDV 323 >gi|94988371|ref|YP_596472.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS9429] gi|94992253|ref|YP_600352.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS2096] gi|94541879|gb|ABF31928.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS9429] gi|94545761|gb|ABF35808.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS2096] Length = 359 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALKYQSL---YNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIGL-----DKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKEL 344 >gi|323466404|gb|ADX70091.1| Isopentenyl diphosphate isomerase [Lactobacillus helveticus H10] Length = 338 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 159/268 (59%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D+ + E K +S P I++MTGG+ + + +N+ L A + Sbjct: 27 FDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFFINAMTGGSKQSL-IVNQALGKIAHQ 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + ++SF + R P+ VLI N+ N + + Q + L Sbjct: 86 EKIALALGSASILAKEKDQLESFYVARDEDPNGVLIVNV-----NPETPINAIKQTIKEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L +I + + +P+++KEVG GL I L Sbjct: 141 QADALQIHLNTVQEIAMPEGDRNFIWLD-QIKNILDQITIPVIIKEVGFGLDQNSIHLLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++GI+YFD+AG GGT++++IE+ R+ + D+ + +D G+PT +S MA+ FI S Sbjct: 200 ENGIKYFDVAGSGGTNFAQIENARN-DHDVSYL-EDIGLPTVISALMAQKES--VNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +DILK + LG G+++ FL+ Sbjct: 256 GGVRNPLDILKGLSLGGQFVGISNVFLQ 283 >gi|309805045|ref|ZP_07699101.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 09V1-c] gi|315653559|ref|ZP_07906479.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners ATCC 55195] gi|329920285|ref|ZP_08277069.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 1401G] gi|308165636|gb|EFO67863.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 09V1-c] gi|315488921|gb|EFU78563.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners ATCC 55195] gi|328936330|gb|EGG32778.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 1401G] Length = 341 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 173/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIKTTFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q + L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLINVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + + M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLVTLMALFGINKLDDV 323 >gi|56808904|ref|ZP_00366613.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Streptococcus pyogenes M49 591] gi|209559232|ref|YP_002285704.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes NZ131] gi|209540433|gb|ACI61009.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Streptococcus pyogenes NZ131] Length = 329 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPIILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKEL 314 >gi|15674904|ref|NP_269078.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes M1 GAS] gi|19745947|ref|NP_607083.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS8232] gi|21910134|ref|NP_664402.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS315] gi|28896167|ref|NP_802517.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes SSI-1] gi|71910498|ref|YP_282048.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS5005] gi|54037384|sp|P65104|IDI2_STRP3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54037385|sp|P65105|IDI2_STRP8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54041382|sp|P65103|IDI2_STRP1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|73920025|sp|Q5XCM6|IDI2_STRP6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91207079|sp|Q48U28|IDI2_STRPM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|13622044|gb|AAK33799.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19748105|gb|AAL97582.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|21904326|gb|AAM79205.1| putative isopentenyl diphosphate isomerase [Streptococcus pyogenes MGAS315] gi|28811417|dbj|BAC64350.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71853280|gb|AAZ51303.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS5005] Length = 329 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKEL 314 >gi|188586254|ref|YP_001917799.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350941|gb|ACB85211.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 350 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 175/339 (51%), Gaps = 15/339 (4%) Query: 1 MVN--DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M+N DRK DH+++ + +D L+H LPE ++DE++ S G + P Sbjct: 1 MINRSDRKSDHLHLAINQYD---TQNILEDIKLLHNCLPECNYDEINLSTSLCGLNFNNP 57 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 ++I+++TGG + + +N+ +A A + + MAVGSQ++ D N +FE+ R+ P Sbjct: 58 IMINAITGGTQEAYQ-LNKKIASVAREVNIPMAVGSQKIALEDQNYQDTFEVVRRENPRG 116 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 V+ +N+GA Q A Q ++ ADGL +HLN QE+ G+ +F ++ IA Sbjct: 117 VIFANIGAYAT-----PQMAQQICEMIKADGLQIHLNIPQELAMGEGDRSFQGYANNIAK 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + +D+P+++KEVG G+ +I + G++ DI+G GGT++ +E+ R LE Sbjct: 172 IIDYVDIPVIVKEVGFGVKKEEISKLMDIGVKAVDISGCGGTNFINLENSR-LEQPNLPS 230 Query: 238 FQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAM 295 +DWGI T S LE + IASGG ++I K++ LGA LA P Sbjct: 231 AKDWGIDTGSSLLEAVESSYHNLDIIASGGFSRSIEITKALALGARCVALAGYPLHILWH 290 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D +++ +E L E M + G + +L LI Sbjct: 291 YGQDELISQLEQLLTELRSMMLMCGATSISQLCQTPLLI 329 >gi|289168576|ref|YP_003446845.1| isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus mitis B6] gi|288908143|emb|CBJ22984.1| isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus mitis B6] Length = 336 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K F Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGQKWDFLFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA A+ + GS D SF +R P+ +L Sbjct: 58 INAMTGGSDKGKE-INQKLAQVADACGILFVTGSYSAALKDPTD-DSFSVRSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F + S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPLLLQVHVNVMQELLMPEGERTFRNWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + + + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQDWKDRVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ + + + M L + +L Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADL 315 >gi|139473956|ref|YP_001128672.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes str. Manfredo] gi|134272203|emb|CAM30449.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes str. Manfredo] Length = 329 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNMMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKEL 314 >gi|94990252|ref|YP_598352.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10270] gi|94994173|ref|YP_602271.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10750] gi|94543760|gb|ABF33808.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10270] gi|94547681|gb|ABF37727.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10750] Length = 359 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKEL 344 >gi|71903330|ref|YP_280133.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS6180] gi|71802425|gb|AAX71778.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS6180] Length = 359 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKEL 344 >gi|297617650|ref|YP_003702809.1| isopentenyl-diphosphate delta-isomerase, type 2 [Syntrophothermus lipocalidus DSM 12680] gi|297145487|gb|ADI02244.1| isopentenyl-diphosphate delta-isomerase, type 2 [Syntrophothermus lipocalidus DSM 12680] Length = 349 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 169/297 (56%), Gaps = 18/297 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK++H+ + + P + F+D L+H A+PE+ ++++ EFLG++L PLL Sbjct: 1 MRTRRKLEHLRLALELP-LGPGATGFEDVFLVHNAVPELELNQIELGTEFLGRRLQAPLL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++M+GG N+ + IN +LA+ A + + MAVGSQ + + ++SF++ RQ P ++ Sbjct: 60 INAMSGGINEARD-INESLAMLAAEYGLGMAVGSQIIGVEEDACLESFQVVRQVNPGGLV 118 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A+ V A +AV ++ ADGL +HLN QE+ G+ F + I L Sbjct: 119 LANVSALA-----KVSVAMRAVEMVEADGLQVHLNVPQELAMAEGDRKFEGVLDNIHELV 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VP+++KEVG G+S + + G++Y DI G GGT++ IE+ R G +F Sbjct: 174 ERLPVPVIVKEVGFGMSREVADKLISVGVKYLDIGGHGGTNFIAIENER------GGLFD 227 Query: 240 D----WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + WGIPT +SL E + IA+GG+ + + K++ LGA L G+A LK Sbjct: 228 EEMALWGIPTAVSLIEVLSLNREVKVIATGGISSPLRAAKALGLGADLVGVAGILLK 284 >gi|50914048|ref|YP_060020.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10394] gi|50903122|gb|AAT86837.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10394] Length = 359 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKEL 344 >gi|306827524|ref|ZP_07460807.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes ATCC 10782] gi|304430322|gb|EFM33348.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes ATCC 10782] Length = 329 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-DSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVVLGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + ++E + M L K ++EL Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKEL 314 >gi|315612570|ref|ZP_07887483.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis ATCC 49296] gi|315315551|gb|EFU63590.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis ATCC 49296] Length = 333 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHFSLPLYDLDEIDLSTEFAGHKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDPTD-NSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S+ Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSN 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIVLKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQAWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + M L + +L Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADL 315 >gi|270293341|ref|ZP_06199550.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M143] gi|270278190|gb|EFA24038.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M143] Length = 333 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFSGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS V D SF ++ P +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSVALKDPTD-DSFSVKSSHPKLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIGL-----DKPVELGLQTVTEMNPLLLQVHVNVMQELLMPEGERKFRSWYSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + GI+ D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDVKTIERAYELGIQTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVESYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + M L + +L Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADL 315 >gi|309804007|ref|ZP_07698089.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 11V1-d] gi|308163926|gb|EFO66191.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 11V1-d] Length = 341 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/330 (33%), Positives = 172/330 (52%), Gaps = 20/330 (6%) Query: 5 RKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI++ K P D F +LI ALPE F K S P Sbjct: 7 RKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIKTTFFHKIASAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L Sbjct: 62 IEAMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + + A Q V L AD L +HLN +QE G+ +F L + I + Sbjct: 121 LANINPLT-----KPKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQ 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + Sbjct: 175 QLVNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 D G+ T SL FIASGG+ + ++I KS++LGA G+A+ FL +M + Sbjct: 234 DLGLSTVKSLLSNLQEIPHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKN 293 Query: 300 --AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+++ I+ L+ + + M L G ++ ++ Sbjct: 294 GTALISEIQKLKYQLVTLMALFGINKLDDV 323 >gi|228996710|ref|ZP_04156347.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] gi|228763029|gb|EEM11939.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] Length = 349 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 167/325 (51%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++HI G R F D +H++LP S++ + E LS P+ I++M Sbjct: 6 RKLEHIEYAL-STGQSRIHGFHD-IAFVHQSLPNSSYESITFETEIGELSLSSPIFINAM 63 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG IN LA A+ +AMAVGSQ D S+ + R+ P+ ++ +NL Sbjct: 64 TGGGGDHTLHINEQLAHVAKHHNLAMAVGSQMAALKDEKEASSYRIVRKVNPNGIVFANL 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + ++ Sbjct: 124 GS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEQIVTSSP 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S ++ G+ D+ G GGT+++ +E+ R + F DWGI Sbjct: 179 VPVIVKEVGFGMSKETVQQLTDVGVTAVDVGGYGGTNFAAVENER--RKRMLSYFNDWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 T S+ A IASGG++ +D+ K+I LGA A FL+ M D ++ Sbjct: 237 QTVASIIEASSTNKNLSLIASGGIQTALDVAKAIALGARATAFAGYFLRILMNDGIQKLM 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE L + M LG + + EL Sbjct: 297 DEIELLHTDLQFIMTALGARTLSEL 321 >gi|168490696|ref|ZP_02714839.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC0288-04] gi|183574814|gb|EDT95342.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC0288-04] Length = 336 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLHTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|322386749|ref|ZP_08060373.1| isopentenyl-diphosphate delta-isomerase [Streptococcus cristatus ATCC 51100] gi|321269031|gb|EFX51967.1| isopentenyl-diphosphate delta-isomerase [Streptococcus cristatus ATCC 51100] Length = 334 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 108/328 (32%), Positives = 164/328 (50%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DHIN + P + N FDD LIH +LP E+D S F G+ FP Sbjct: 1 MSQSRKDDHINYALEQP-LGYNS--FDDIELIHCSLPAYDLAEIDLSTHFAGRDWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN LA AE + GS + + S+ + + P +L Sbjct: 58 INAMTGGSPKGRE-INEKLAKVAEACGILFVTGSYSAALKNPDD-DSYAVAKDKPSLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SN+G D V QAV L L LH+N +QE++ P G F + Sbjct: 116 SNIG-----LDKPVAAGLQAVSDLKPLFLQLHVNVMQELLMPEGERTFRTWKQHLEAYGK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 PL+LKEVG G+ IE GI FDI+GRGGTS++ IE+ R + D D Sbjct: 171 DFPAPLVLKEVGFGMDRKTIEEAQALGISTFDISGRGGTSFAYIENRRSGQRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + ++SGG+R+ +D++K+++LGA GL+ L + Sbjct: 228 WGQTTAQALLAAQDWVDKVELLSSGGIRHPLDMVKALVLGAKAVGLSRTMLALVEKYPVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + +++ + M L + +++L Sbjct: 288 EVIAIVNGWKEDLRLLMCALSCRNLEDL 315 >gi|323127098|gb|ADX24395.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 166/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDMELIHHSLPSYDVADIDLSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-ASYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V++ Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIGL-----DKPVERGQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVSTIKIAHELGIQTFDISGRGGTSFAYIENQRGLDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVEILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ + +++ + M L + +Q+L Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDL 314 >gi|148983788|ref|ZP_01817107.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP3-BS71] gi|149006136|ref|ZP_01829865.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP18-BS74] gi|307126596|ref|YP_003878627.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 670-6B] gi|147762492|gb|EDK69453.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP18-BS74] gi|147923935|gb|EDK75047.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP3-BS71] gi|301799494|emb|CBW32040.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae OXC141] gi|306483658|gb|ADM90527.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 670-6B] gi|332076824|gb|EGI87286.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA17545] gi|332077672|gb|EGI88133.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA41301] Length = 336 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYIK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|194397821|ref|YP_002037064.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae G54] gi|194357488|gb|ACF55936.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae G54] Length = 336 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 13/292 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQKS---SYNSFDEVELIHSSLPLYNLDEIDLSTEFSGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNPTD-DSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGFQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++G GGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGXGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ Sbjct: 228 WGQXTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLE 279 >gi|225870470|ref|YP_002746417.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. equi 4047] gi|225699874|emb|CAW93762.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. equi 4047] Length = 330 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/329 (32%), Positives = 165/329 (50%), Gaps = 18/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK DHI + + + FDD LIH +LP ++D S F G FP Sbjct: 1 MTNRKDDHIT-----HALSYHSPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPF 55 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K + +N LA A T + M GS + SF+LR AP L Sbjct: 56 YINAMTGGSKKG-QAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQLRGVAPDLQL 113 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 114 ATNIG-----LDKAVDLGIRAVEEMKPLFLQVHVNAMQELLMPEGERSFKHWKDHLAAYA 168 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R Sbjct: 169 KQLPVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNRS---YLD 225 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ Sbjct: 226 DWGQTTVQCLLNAKGLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVVLELVETYPV 285 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + ++A I S +KE + M L + + +L Sbjct: 286 EQIIATINSWKKELKLIMCALDCRTLSDL 314 >gi|55978293|ref|YP_145349.1| isopentenyl pyrophosphate isomerase [Thermus thermophilus HB8] gi|206582012|pdb|3DH7|A Chain A, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582013|pdb|3DH7|B Chain B, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582014|pdb|3DH7|C Chain C, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582015|pdb|3DH7|D Chain D, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|55773466|dbj|BAD71906.1| isopentenyl-diphosphate delta-isomerase [Thermus thermophilus HB8] Length = 332 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 7/327 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ERIN LA AAE V M +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAMTGGEENG-ERINLALAEAAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V +L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEMLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + P+++KEVG GLS + L L+ + D+AG GGTSW+R+E Sbjct: 180 -LPFPVMVKEVGHGLSR-EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELC 237 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 + GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 238 EIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAE 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G + +E Sbjct: 298 RVAAWIGDYLEELRTALFAIGARNPKE 324 >gi|46255138|ref|YP_006050.1| isopentenyl pyrophosphate isomerase [Thermus thermophilus HB27] gi|46197987|gb|AAS82397.1| isopentenyl-diphosphate delta-isomerase [Thermus thermophilus HB27] Length = 332 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 175/327 (53%), Gaps = 7/327 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALGEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ERIN LA AAE V M +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAMTGGEENG-ERINLALAEAAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEALEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + P+++KEVG GLS + L L+ + D+AG GGTSW+R+E Sbjct: 180 -LPFPVMVKEVGHGLSR-EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELC 237 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 + GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 238 EIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAE 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G K +E Sbjct: 298 RVAAWIGDYLEELRTALFAIGAKNPKE 324 >gi|13878560|sp|Q9KWG2|IDI2_STRC1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|9695273|dbj|BAB07793.1| hypothetical protein [Streptomyces sp. CL190] gi|12539423|dbj|BAB21467.1| isopentenyl diphosphate isomerase [Streptomyces sp. CL190] Length = 363 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 169/325 (52%), Gaps = 11/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DH+ + + + FDD +H AL I +V + F G P+ I++M Sbjct: 6 RKDDHVRLAIEQHNAHSGRNQFDDVSFVHHALAGIDRPDVSLATSFAGISWQVPIYINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ K INR+LA AA +T V +A GS D + +F LR P+ +I+N+ Sbjct: 66 TGGSEKT-GLINRDLATAARETGVPIASGSMNAYIKDPSCADTFRVLRDENPNGFVIANI 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A V A +A+ ++ A+ L +H+N QE P G+ +FA +I +++A+D Sbjct: 125 NATTT-----VDNAQRAIDLIEANALQIHINTAQETPMPEGDRSFASWVPQIEKIAAAVD 179 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG GLS I L G++ D++GRGGT ++RIE+ R D WG Sbjct: 180 IPVIVKEVGNGLSRQTILLLADLGVQAADVSGRGGTDFARIENGRRELGDYAF-LHGWGQ 238 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T L A+ +ASGG+R+ +D+++++ LGA G ++ FL+ MD DA++ Sbjct: 239 STAACLLDAQDI--SLPVLASGGVRHPLDVVRALALGARAVGSSAGFLRTLMDDGVDALI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + + + +LG + +L Sbjct: 297 TKLTTWLDQLAALQTMLGARTPADL 321 >gi|24379383|ref|NP_721338.1| isopentenyl pyrophosphate isomerase [Streptococcus mutans UA159] gi|32129629|sp|Q8DUI9|IDI2_STRMU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|24377312|gb|AAN58644.1|AE014934_8 putative dehydrogenase (FMN-dependent family protein) [Streptococcus mutans UA159] Length = 331 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/329 (30%), Positives = 167/329 (50%), Gaps = 18/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK DHI +D + FDD LIH +LP+ E+D S F G+ FP Sbjct: 1 MTNRKDDHIKY-----ALDYRSPYNSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPF 55 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K E +N LA A+ + GS + + S+++++ PH +L Sbjct: 56 YINAMTGGSQKGKE-VNEKLAQVADTCGLLFVTGSYSTALKNPDDT-SYQVKKSRPHLLL 113 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q QAV L L +H+N +QE++ P G F ++ + Sbjct: 114 ATNIG-----LDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYA 168 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P +LKEVG G+ I+ + G++ DI+GRGGTS++ IE+ R Sbjct: 169 KKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRS---YLN 225 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 WG T L A+P ++ + +ASGG+R+ +DI+K+++LGA GL+ L+ S Sbjct: 226 QWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSV 285 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + +++ + M L + + EL Sbjct: 286 HEVIAIVNGWKEDLRLIMCALNCQTIAEL 314 >gi|315222757|ref|ZP_07864645.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus anginosus F0211] gi|315188170|gb|EFU21897.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus anginosus F0211] Length = 338 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 168/328 (51%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + FDD LIH +LP+ DE+D + +F GK FP Sbjct: 1 MSENRKDEHIKYALEQTS---GYNSFDDMELIHCSLPKYDLDEMDLTTQFAGKDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS ++ A S+ + + P+ +L Sbjct: 58 INAMTGGSEKGKD-INQRLAQVAESCGILFVTGSYSAAV-NNPADDSYAVSKDKPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G V Y G QA+ L L +H+N +QE++ P G +F + + + Sbjct: 116 TNIG-VDKPYSLG----QQAITDLHPLFLQVHVNLMQELLMPEGERSFKTWRAHLKDYAE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ IE GIR D++GRGGTS++ IE+ R D D Sbjct: 171 QSTVPVVLKEVGFGMDLATIETAYDLGIRTVDLSGRGGTSFAYIENRRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 WG T +L A+P ++ + SGG+R +D++K+ +LGA GL+ L+ S D Sbjct: 228 WGQSTLQALLNAQPMMDKMDILVSGGVRQPLDMVKAFVLGAKAVGLSRTMLELIETYSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ + +++ + M LG + + EL Sbjct: 288 EVITIVNGWKEDLRLIMCALGCQNLPEL 315 >gi|114566866|ref|YP_754020.1| isopentenyl pyrophosphate isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337801|gb|ABI68649.1| Isopentenyl-diphosphate delta-isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 310 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 95/255 (37%), Positives = 146/255 (57%), Gaps = 10/255 (3%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 +S DE+D S+ FLGK+L +PL+I+++TGG + + INR LA A K ++ MAVGSQ + Sbjct: 1 MSLDEIDLSINFLGKELQYPLMINALTGGTAQALA-INRALARMALKYRLPMAVGSQSIA 59 Query: 99 FSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 A SF + R P+ ++++N+ A V++A +AV ++ AD L LH N +Q Sbjct: 60 LESPEAGPSFSIVRDINPNGIILANMNAATR-----VEEALEAVRMISADALQLHFNVVQ 114 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 E+ G+ +F + + + VP++ KEVG G S + ++GI FD G+G Sbjct: 115 ELAMTEGDRDFKGIVDNVRQIVHECPVPVIAKEVGFGFSREAAQCLWEAGIEIFDCGGQG 174 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT++ IE R + WGIPT +SL M Q IASGG+R+ +D+ K++ Sbjct: 175 GTNFIVIEDQRG--GNFAGELDTWGIPTAISL-MEILQLPVKQVIASGGIRSALDVTKAL 231 Query: 278 ILGASLGGLASPFLK 292 LGA L G+A+P LK Sbjct: 232 TLGADLVGMAAPLLK 246 >gi|13878559|sp|Q9KWF6|IDI2_KITGR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|9711349|dbj|BAB07820.1| hypothetical protein [Kitasatospora griseola] Length = 364 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 111/332 (33%), Positives = 171/332 (51%), Gaps = 11/332 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DH+ + + + FDD +H AL I +V + F G PL I++M Sbjct: 6 RKDDHVRLATEQQRAHSGRNQFDDVSFVHHALAGIDRPDVRLATTFAGITWRLPLYINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ K INR+LA+AA +T A+A GS F D + +F LR P +++N+ Sbjct: 66 TGGSAK-TGAINRDLAVAARETGAAIASGSMHAFFRDPSCADTFRVLRTENPDGFVMANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A V A +AV ++ A+ L +HLN QE P G+ +F ++IA +++A+D Sbjct: 125 NATA-----SVDNARRAVDLIEANALQIHLNTAQETPMPEGDRSFGSWPAQIAKITAAVD 179 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLS + G+R D++GRGGT ++RIE+ R D WG Sbjct: 180 VPVIVKEVGNGLSRQTLLALPDLGVRVADVSGRGGTDFARIENSRRPLGDYAF-LHGWGQ 238 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 TP L A+ +ASGG+RN +D+ +++ LGA G + FL+ +D A+V Sbjct: 239 STPACLLDAQDVGFP--LLASGGIRNPLDVARALALGAGAVGSSGVFLRTLIDGGVSALV 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A I + + +LG + +L LI Sbjct: 297 AQISTWLDQLAALQTMLGARTPADLTRCDVLI 328 >gi|290580615|ref|YP_003485007.1| putative dehydrogenase [Streptococcus mutans NN2025] gi|254997514|dbj|BAH88115.1| putative dehydrogenase [Streptococcus mutans NN2025] Length = 331 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/329 (30%), Positives = 167/329 (50%), Gaps = 18/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK DHI +D + FDD LIH +LP+ E+D S F G+ FP Sbjct: 1 MTNRKDDHIKY-----ALDYCSPYNSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPF 55 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K E +N LA A+ + GS + + S+++++ PH +L Sbjct: 56 YINAMTGGSQKGKE-VNEKLAQVADTCGLLFVTGSYSTALKNPDDT-SYQVKKSRPHLLL 113 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D Q QAV L L +H+N +QE++ P G F ++ + Sbjct: 114 ATNIG-----LDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYA 168 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P +LKEVG G+ I+ + G++ DI+GRGGTS++ IE+ R Sbjct: 169 KKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRS---YLN 225 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 WG T L A+P ++ + +ASGG+R+ +DI+K+++LGA GL+ L+ S Sbjct: 226 QWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSV 285 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + +++ + M L + + EL Sbjct: 286 HEVIAIVNGWKEDLRLIMCALNCQTIAEL 314 >gi|16800488|ref|NP_470756.1| isopentenyl pyrophosphate isomerase [Listeria innocua Clip11262] gi|20978490|sp|Q92BX2|IDI2_LISIN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|16413893|emb|CAC96651.1| lin1420 [Listeria innocua Clip11262] Length = 358 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 181/332 (54%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N+ +D LI ++P + ++D + FLG + FP Sbjct: 12 RKDEHVAL-----GVKQNENLAPSSLEDIQLIGTSIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVSP-----EVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGVTTVDLAGKGGTNFAQIENDRRRDQAYNFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIISSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 D V IE L KE + +F+L K + EL Sbjct: 298 DGVSKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|322377080|ref|ZP_08051572.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M334] gi|321281793|gb|EFX58801.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M334] Length = 336 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 167/328 (50%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKS---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS D SF ++ P +L Sbjct: 58 INAMTGGSEKGKE-INQKLAQVAEACGILFVTGSYSAALKDPTD-DSFSVKSDHPSLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLHTVVEMNPLLLQVHVNVMQELLMPEGERMFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G++ FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVQTFDLSGRGGTSFAYIENRRSGQRD---YLDQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVESYTIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I+ + + + M L + +L Sbjct: 288 EVIGIIQGWKADLRLIMCALNCATIADL 315 >gi|260101297|ref|ZP_05751534.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus helveticus DSM 20075] gi|260084882|gb|EEW69002.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus helveticus DSM 20075] Length = 338 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 97/268 (36%), Positives = 158/268 (58%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D+ + E K +S P I++MTGG+ + + +N+ L A + Sbjct: 27 FDQMHLLRPALPESMVDQSVLATEMFNKSVSAPFFINAMTGGSKQSL-IVNQALGKIAHQ 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + ++SF R P+ VLI N+ N + + Q + L Sbjct: 86 EKIALALGSASILAKEKDQLESFYAARDEDPNGVLIVNV-----NPETPINAIKQTIKEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L +I + + +P+++KEVG GL I L Sbjct: 141 QADALQIHLNTVQEIAMPEGDRNFIWLD-QIKNILDQITIPVIIKEVGFGLDQNSIHLLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++GI++FD+AG GGT++++IE+ R+ + D+ + +D G+PT +S MA+ FI S Sbjct: 200 ENGIKFFDVAGSGGTNFAQIENARN-DHDVSYL-EDIGLPTVISALMAQKES--VNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +DILK + LG G+++ FL+ Sbjct: 256 GGVRNPLDILKGLSLGGQFVGISNVFLQ 283 >gi|225868465|ref|YP_002744413.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. zooepidemicus] gi|225701741|emb|CAW99111.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. zooepidemicus] Length = 330 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 164/329 (49%), Gaps = 18/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK DHI + + + FDD LIH +LP ++D S F G FP Sbjct: 1 MTNRKDDHIT-----HALSYHSPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPF 55 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K + +N LA A T + M GS + SF+LR AP L Sbjct: 56 YINAMTGGSKKA-QAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQLRGVAPDLQL 113 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 114 ATNIG-----LDKAVDLGIRAVEEMNPLFLQVHVNTMQELLMPEGERSFKHWKDHLAAYA 168 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R Sbjct: 169 KQLPVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNRS---YLD 225 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ Sbjct: 226 DWGQTTVQCLLNAKDLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVMLELVETYPV 285 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ I S ++E + M L + + +L Sbjct: 286 EQVITMINSWKEELRLIMCALDCRTLSDL 314 >gi|227890032|ref|ZP_04007837.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii ATCC 33200] gi|227849476|gb|EEJ59562.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii ATCC 33200] Length = 345 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 171/314 (54%), Gaps = 14/314 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ HLI ALPE + S E G ++S P I++MTGG++ IN+ LA AA Sbjct: 31 FNHVHLIRPALPESAVSRDSISTEMFGHQISAPFFINAMTGGSDTSY-TINQRLAKAAAA 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA+GS ++ + + IKSFE+ RQ P ++ +N+ N + A + V L Sbjct: 90 ENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFANV-----NPTTDPKVAQKIVDAL 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +HLN +QE + P G+ +F + + + + +DVP+++KEVG G+ + L Sbjct: 145 DANALQIHLNSVQEAVMPEGDRDFHWIDN-LKEIRDTIDVPIIIKEVGMGIDPESLRTLL 203 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + D+ G GGT++++IE+ R + + +D G+ T +L AR IA+ Sbjct: 204 INDFSIIDLGGSGGTNFAQIENERRKTQKLNFL-EDIGLSTVKTLLAARTIPVNKTIIAA 262 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG+ N +DI KS++LGA G+A+ FL+ A S+ ++AAI++L+ E + L G + Sbjct: 263 GGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETLIAAIQNLKYELKLLTALFGLDHI 322 Query: 325 Q-----ELYLNTAL 333 + YL+T L Sbjct: 323 SKADEVKYYLDTDL 336 >gi|251782247|ref|YP_002996549.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390876|dbj|BAH81335.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 330 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 166/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP +++ S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDMELIHHSLPSYDVADINLSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPND-ASYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V++ Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIGL-----DKPVERGQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVSTIKIAHELGIQTFDISGRGGTSFAYIENQRGLDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVEILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ + +++ + M L + +Q+L Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDL 314 >gi|184153514|ref|YP_001841855.1| isopentenyl pyrophosphate isomerase [Lactobacillus reuteri JCM 1112] gi|227364570|ref|ZP_03848631.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri MM2-3] gi|325682315|ref|ZP_08161832.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri MM4-1A] gi|226707319|sp|B2G7E3|IDI2_LACRJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183224858|dbj|BAG25375.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri JCM 1112] gi|227070407|gb|EEI08769.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri MM2-3] gi|324978154|gb|EGC15104.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri MM4-1A] Length = 348 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 166/290 (57%), Gaps = 11/290 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I + Sbjct: 9 RKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYIEA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+++ + +INR LA A K +AMA GS ++ D + SFE+ R+ P ++ +N Sbjct: 69 MTGGSDQAL-KINRQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A + + +A A+ +L A+ L LH+N QE+I P G+ +F L + I L S + Sbjct: 128 LSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDFNWLDN-IQYLVSEL 181 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + + DWG Sbjct: 182 EVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINFESLL-DWG 240 Query: 243 IPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP S LE + + IASGG+ + +D++K+ +LGA G+A FL Sbjct: 241 QTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFL 290 >gi|81428516|ref|YP_395516.1| isopentenyl pyrophosphate isomerase [Lactobacillus sakei subsp. sakei 23K] gi|91207071|sp|Q38X74|IDI2_LACSS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78610158|emb|CAI55207.1| Isopentenyl diphosphate delta-isomerase (IPP isomerase) [Lactobacillus sakei subsp. sakei 23K] Length = 349 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 160/288 (55%), Gaps = 10/288 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + K DR F D IH++LPE++ +VD S +F G P I+ M Sbjct: 12 RKDEHVFLAEKFHQDDRQNDF-DGLRFIHQSLPELAIADVDISTQFAGTTWQSPFYINGM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ + +++N LA A+ + MA GSQ V D + +F +R++ P +++N+ Sbjct: 71 TGGSQQT-KKLNAQLAQVAQIAGLPMATGSQSVAIKDPTLVDTFSVIREFNPAGFILANI 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D V A +AV + A+ L +H+N QE++ P G+ F L +I + + +D Sbjct: 130 GA---GNDLSV--AQKAVAMTQANALEIHVNTAQEVVMPEGDREFYWLD-QIGEIVANLD 183 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S+ I G+ D++G+GGT++ IE+ R + DWG Sbjct: 184 VPVIVKEVGFGMSAETIAKLQSVGVTNIDVSGKGGTNFVTIENERRRDKAYD-YLSDWGQ 242 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 T SL ++ + E +ASGG+RN +DI+K++ LGAS G++ L Sbjct: 243 STVESLFESQAFQTELTILASGGIRNPLDIVKALRLGASAVGISGQIL 290 >gi|148544141|ref|YP_001271511.1| isopentenyl pyrophosphate isomerase [Lactobacillus reuteri DSM 20016] gi|166918475|sp|A5VK00|IDI2_LACRD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148531175|gb|ABQ83174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri DSM 20016] Length = 348 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 166/290 (57%), Gaps = 11/290 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I + Sbjct: 9 RKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYIEA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+++ + +INR LA A K +AMA GS ++ D + SFE+ R+ P ++ +N Sbjct: 69 MTGGSDQAL-KINRQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A + + +A A+ +L A+ L LH+N QE+I P G+ +F L + I L S + Sbjct: 128 LSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDFNWLDN-IQYLVSEL 181 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + + DWG Sbjct: 182 EVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINFESLL-DWG 240 Query: 243 IPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP S LE + + IASGG+ + +D++K+ +LGA G+A FL Sbjct: 241 QTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFL 290 >gi|312868198|ref|ZP_07728398.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parasanguinis F0405] gi|311095943|gb|EFQ54187.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parasanguinis F0405] Length = 334 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 171/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D F G+ P Sbjct: 1 MSENRKDQHIRYALEQSS---SYNSFDEIELIHRSLPLVDLAEIDLITHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+E+++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAALKDPND-QSYEVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + D G++ + +H L L +H+N +QE++ P G F + Sbjct: 116 TNIG-IDKEPDLGLRTVEE-LHPLF---LQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L +GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFPVPVVLKEVGFGMDPQTVQAALDAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEILASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + + LG + ++EL Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKEL 315 >gi|161507629|ref|YP_001577583.1| isopentenyl pyrophosphate isomerase [Lactobacillus helveticus DPC 4571] gi|160348618|gb|ABX27292.1| Isopentenyl diphosphate isomerase [Lactobacillus helveticus DPC 4571] Length = 338 Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 158/268 (58%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D+ + E K +S P I++MTGG+ + + +N+ L A + Sbjct: 27 FDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFFINAMTGGSKQSL-IVNQALGKIAHQ 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + ++SF + R P+ VLI N+ N + + Q + L Sbjct: 86 EKIALALGSASILAKEKDQLESFYVARDEDPNGVLIVNV-----NPETPINAIKQTIKEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L +I + + +P+++KEVG GL I L Sbjct: 141 QADALQIHLNTVQEIAMPEGDRNFIWLD-QIKNILDQITIPVIIKEVGFGLDQNSIHLLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++GI++FD+AG GG ++++IE+ R+ + D+ + +D G+PT +S MA+ FI S Sbjct: 200 ENGIKFFDVAGSGGINFAQIENARN-DHDVSYL-EDIGLPTVISALMAQKES--VNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +DILK + LG G+++ FL+ Sbjct: 256 GGVRNPLDILKGLSLGGQFVGISNVFLQ 283 >gi|83590175|ref|YP_430184.1| isopentenyl pyrophosphate isomerase [Moorella thermoacetica ATCC 39073] gi|91207073|sp|Q2RIU8|IDI2_MOOTA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|83573089|gb|ABC19641.1| isopentenyl-diphosphate delta-isomerase [Moorella thermoacetica ATCC 39073] Length = 346 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 181/335 (54%), Gaps = 13/335 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++H+ +D + +D HL+H+ALPE+++ ++D + +LGK L+ P +I+++ Sbjct: 12 RKLEHLRFFQED---SKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLAAPFIINAL 68 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG + + IN LA A +T +A+AVGSQR + +SF + R+ + ++++N+ Sbjct: 69 TGGPPETLA-INAALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENANGLILANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D G +AV ++ ADGL +HLN QE+I P G+ F I + + + Sbjct: 128 GAGNSPADAG-----EAVAMIAADGLQVHLNAAQELIMPEGDRAFRGWLENIRGMVNTLG 182 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP++ KEVG GLS ++G+R D+ GRGGT+++ IE R S + WG+ Sbjct: 183 VPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAALA--GWGL 240 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVV 302 T +S+ R + +A+GG+R+ +D +++ LGA + G A FLK ++ DA+ Sbjct: 241 STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALT 300 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 I +++ L G EL +I Q Sbjct: 301 EEILQWQEDLKRICLLTGCTTPAELATKPVVITGQ 335 >gi|329667332|gb|AEB93280.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii DPC 6026] Length = 341 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 170/314 (54%), Gaps = 14/314 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ HLI ALPE + S E G +S P I++MTGG++ IN+ LA AA Sbjct: 27 FNHVHLIRPALPESAVSRDSISTEMFGHTISAPFFINAMTGGSDTSY-TINQRLAKAAAA 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA+GS ++ + + IKSFE+ RQ P ++ +N+ N + A + V L Sbjct: 86 ENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFANV-----NPTTDPKVAQKIVDAL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +HLN +QE + P G+ +F + + + + +DVP+++KEVG G+ + L Sbjct: 141 DANALQIHLNSVQEAVMPEGDRDFHWIDN-LKEIRDTVDVPIIIKEVGMGIDPESLRTLL 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + D+ G GGT++++IE+ R + + +D G+ T +L AR IA+ Sbjct: 200 INDFSIIDLGGSGGTNFAQIENERRKTQKLNFL-EDIGLSTVKTLLAARTIPVTKTIIAA 258 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG+ N +DI KS++LGA G+A+ FL+ A S+ ++AAI++L+ E + L G + Sbjct: 259 GGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETLIAAIQNLKYELKLLTALFGLDNI 318 Query: 325 Q-----ELYLNTAL 333 + YL+T L Sbjct: 319 SKADEVKYYLDTDL 332 >gi|296875771|ref|ZP_06899834.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 15912] gi|296433236|gb|EFH19020.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 15912] Length = 334 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 172/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D + F G+ P Sbjct: 1 MSENRKDQHIRYALEQSS---SYNSFDEIELIHRSLPLVDLAEIDLTTHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+ +++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAALKDPND-QSYAVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + D G++ + +H L L +H+N +QE++ P G F + Sbjct: 116 TNIG-IDKEPDLGLRTVEE-LHPLF---LQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L++GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFHVPVVLKEVGFGMDPKTVQAALEAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEVLASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + + LG + ++EL Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKEL 315 >gi|295424862|ref|ZP_06817577.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus amylolyticus DSM 11664] gi|295065428|gb|EFG56321.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus amylolyticus DSM 11664] Length = 338 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 166/304 (54%), Gaps = 13/304 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ LPE D+ FLGK++S P I +MTGG+ K ++INR L A K Sbjct: 27 FDQMHLLRPTLPESKVDQASIRTSFLGKEVSAPFFIEAMTGGSEKS-KKINRQLGSVAAK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +A+A+GS ++ ++ + SF + R+ P +L +N+ + D A + V L Sbjct: 86 ENIALALGSASILVKENEQLSSFTVAREQDPDGLLFANVNPLTPASD-----AAKIVQEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QE P G +F L++ + + A+ VP+++KEVG G ++ Sbjct: 141 QADALQIHLNVVQEAAMPEGERDFCWLNNMLE-IRQAVTVPIIIKEVGFGFDQASLKKLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G FDI G GGT++++IE+ R+ + ++ + G+PT ++ +A + F S Sbjct: 200 DAGFDLFDIGGMGGTNFAQIENSRN-QYNLSYL-SSLGLPTVITSLIAEKM--QLDFFVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+RN +D+LK + LG L G+A+ FL+ M ++ ++ I+ +KE + + + G Sbjct: 256 GGVRNPLDVLKGLALGGKLVGIANTFLQQLMQHDTEGLIEEIQEWKKELAILLAVFGKND 315 Query: 324 VQEL 327 V L Sbjct: 316 VNSL 319 >gi|332638890|ref|ZP_08417753.1| isopentenyl pyrophosphate isomerase [Weissella cibaria KACC 11862] Length = 345 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 172/308 (55%), Gaps = 13/308 (4%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 +IH+ LPE VD +V+ P I +MTGG+ K +IN LA AA++T +AM Sbjct: 34 IIHQGLPETRVANVDLTVDDPIFNFKTPFYIEAMTGGSQKT-GKINAQLATAAKETGLAM 92 Query: 91 AVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 AVGSQ V D NAI +F+ +R+ P +++N+GA A + V ++GA+ L Sbjct: 93 AVGSQSVALKDENAIDTFKVVREINPDGFIMANIGA-----GHTAAHAQEVVDMIGANAL 147 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H+N QE++ P G+ ++ ++A + + VP+++KEVG G++ I G + Sbjct: 148 EVHINVAQEVVMPEGDRDYV-WQDELANIIQTVSVPVIIKEVGFGMAKETIGQLRDLGAQ 206 Query: 210 YFDIAGRGGTSWSRIESHRD--LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 Y ++ GR GT+++ IE R+ + ++ G ++ DWG T SL A+ + +A+GG+ Sbjct: 207 YINLGGRSGTNFAVIEDRRNRAMTAEHGYLY-DWGQTTAESLLEAQLVADAPTLLATGGI 265 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++ +D+LK+ ILGA G+A FL + + +D V+ I+ + ++G +R + Sbjct: 266 QDPLDVLKAQILGAKAVGVAGHFLHTVLNEGTDGVITEIQRWQNHLAKLYAMVGAERQAD 325 Query: 327 L-YLNTAL 333 L ++ T L Sbjct: 326 LQHVQTVL 333 >gi|42519133|ref|NP_965063.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii NCC 533] gi|41583420|gb|AAS09029.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii NCC 533] Length = 341 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 170/314 (54%), Gaps = 14/314 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ HLI ALPE + S E G +S P I++MTGG++ IN+ LA AA Sbjct: 27 FNHVHLIRPALPESAISRDSISTEMFGHTISTPFFINAMTGGSDTSY-TINQRLAKAAAA 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA+GS ++ + + I+SFE+ RQ P ++ +N+ N + A + V L Sbjct: 86 ENIPMALGSASILEKEIDQIESFEVARQENPDGLIFANV-----NPTTDPKVAQKIVDAL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +HLN +QE + P G+ +F + + + + +DVP+++KEVG G+ + L Sbjct: 141 DANALQIHLNSVQEAVMPEGDRDFHWIDN-LKEIRDTVDVPIIIKEVGMGIDPESLRTLL 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + D+ G GGT++++IE+ R + + +D G+ T +L AR IA+ Sbjct: 200 INDFSIIDLGGSGGTNFAQIENERRKTQKLNFL-EDIGLSTVKTLLAARTIPVNKTIIAA 258 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG+ N +DI KS++LGA G+A+ FL+ A S+ ++AAI++L+ E + L G + Sbjct: 259 GGITNALDIFKSLVLGAQYVGIANYFLQYASQDSETLIAAIQNLKYELKLLTALFGLDHI 318 Query: 325 QE-----LYLNTAL 333 + YL+T L Sbjct: 319 SKADEVRYYLDTDL 332 >gi|308174079|ref|YP_003920784.1| Fni [Bacillus amyloliquefaciens DSM 7] gi|307606943|emb|CBI43314.1| Fni [Bacillus amyloliquefaciens DSM 7] gi|328552794|gb|AEB23286.1| isopentenyl pyrophosphate isomerase [Bacillus amyloliquefaciens TA208] gi|328912408|gb|AEB64004.1| Isopentenyl-diphosphate delta-isomerase [Bacillus amyloliquefaciens LL3] Length = 349 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/326 (34%), Positives = 177/326 (54%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HIN G +R DD +H +LP+++ ++VD S E G S P+ I++ Sbjct: 5 ERKREHINHAL-STGQNRETGL-DDITFVHVSLPDLALEKVDISTEIGGLTSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG ++ INR+LA AA K + +AVGSQ D + S+E+ R+ P+ ++ +N Sbjct: 63 MTGGGGQLTYEINRSLARAARKAGMPLAVGSQMSALKDPSERYSYEIVRKENPNGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + ++A +AV ++ AD L +HLN +QEI+ P G+ +F +I + Sbjct: 123 LGS-----EADAEQAKRAVDMIEADALQIHLNVIQEIVMPEGDRSFTGALRRIEQIVDEA 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+ +KEVG G+S +G D G GGT++S+IE+ R E + F WG Sbjct: 178 GVPVFVKEVGFGMSRESARQLFDAGAAAVDAGGYGGTNFSKIENMRR-EKALQF-FNTWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 I T SL + IASGGL++ +D+ K+I LGAS G+A FLK + + Sbjct: 236 ISTAASLAEIHSLSVDQSIIASGGLQSALDVAKTIALGASSAGMAGIFLKALTSKGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +L +E + M +LG + V +L Sbjct: 296 FDEMTALLEELKMIMTVLGCQSVAQL 321 >gi|260584341|ref|ZP_05852088.1| isopentenyl-diphosphate delta-isomerase, type 2 [Granulicatella elegans ATCC 700633] gi|260157859|gb|EEW92928.1| isopentenyl-diphosphate delta-isomerase, type 2 [Granulicatella elegans ATCC 700633] Length = 360 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 169/310 (54%), Gaps = 14/310 (4%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 +H L E++ DEV + G L P I+++TGG+ + IN+ LA A +T +AM Sbjct: 36 FVHHPLSEMAVDEVSLQTKMAGFTLETPFFINAITGGSPRTT-LINQRLAQLAHETGIAM 94 Query: 91 AVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 A GS + D + +SF + R+ P+ ++++NLGA + V+ A +A+ ++ A+G+ Sbjct: 95 ATGSMSIAMKDPSTAESFTIIRKENPNGIVLANLGA-----HYTVESAKKAIDLIEANGI 149 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H+N LQE++ P G+ +F I + S +DVP+++KEVG G S ++ + G++ Sbjct: 150 QIHVNTLQELVMPEGDRSFHHWLKNIEEIVSHVDVPVIVKEVGFGFSREAMQELINIGVQ 209 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 DI+GRGGT+++ IE+ R E + +DWG T SL Y + IASGG+ + Sbjct: 210 TIDISGRGGTNFAAIENARR-EDTLFDELEDWGQTTVQSL--VEGYDLPCELIASGGIHS 266 Query: 270 GVDILKSIILGASLGGLASPFL---KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +DI+K + LGAS G++ FL +P DS + + + + LLG + + Sbjct: 267 PLDIVKCLALGASAVGMSGEFLHLIRP-QDSLPTAIQTVNDWKNQLKNIYTLLGVSKTEA 325 Query: 327 LYLNTALIRH 336 L ++ H Sbjct: 326 LRQTDIILPH 335 >gi|154686534|ref|YP_001421695.1| isopentenyl pyrophosphate isomerase [Bacillus amyloliquefaciens FZB42] gi|166226194|sp|A7Z638|IDI2_BACA2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154352385|gb|ABS74464.1| Fni [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/326 (34%), Positives = 175/326 (53%), Gaps = 11/326 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HIN G +R DD +H +LP ++ ++VD S + G S P+ I++ Sbjct: 5 ERKREHINHAL-STGQNRETGL-DDITFVHVSLPNLALEKVDISTKIGGLTSSSPIFINA 62 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG ++ INR+LA AA K + +AVGSQ D + S+E+ R+ P ++ +N Sbjct: 63 MTGGGGQLTYEINRSLARAARKAGMPLAVGSQMSALKDPSERCSYEIVRKENPDGLIFAN 122 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + ++A AV ++ AD L +HLN +QEI+ P G+ +F +I +++ Sbjct: 123 LGS-----EADAEQAKMAVDMIQADALQIHLNVIQEIVMPEGDRSFTGALGRIERIAAEA 177 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+ +KEVG G+S +G D G GGT++S+IE+ R E + F WG Sbjct: 178 GVPVFVKEVGFGMSRESARQLFDAGAAAVDAGGYGGTNFSKIENMRR-EKALQF-FNTWG 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 I T SL + IASGGL++ +D+ KSI LGAS G+A FLK + + Sbjct: 236 ISTAASLAEIHSLSADQSIIASGGLQSALDVAKSIALGASGAGMAGTFLKALTSKGEEGL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + +L +E + M LG + V +L Sbjct: 296 FDEMTALLQELKMIMTALGCQSVSQL 321 >gi|227544621|ref|ZP_03974670.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri CF48-3A] gi|300910249|ref|ZP_07127709.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri SD2112] gi|227185404|gb|EEI65475.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri CF48-3A] gi|300892897|gb|EFK86257.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri SD2112] Length = 348 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 167/290 (57%), Gaps = 11/290 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I + Sbjct: 9 RKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYIEA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+++ + ++N+ LA A K +AMA GS ++ D + SFE+ R+ P+ ++ +N Sbjct: 69 MTGGSDQAL-KVNQQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPNGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A + + +A A+ +L A+ L LH+N QE+I P G+ +F L + I L S + Sbjct: 128 LSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDFNWLDN-IQYLVSEL 181 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + + DWG Sbjct: 182 EVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINFESLL-DWG 240 Query: 243 IPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP S LE + + IASGG+ + +D++K+ +LGA G+A FL Sbjct: 241 QTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFL 290 >gi|295397030|ref|ZP_06807144.1| isopentenyl-diphosphate delta-isomerase [Aerococcus viridans ATCC 11563] gi|294974721|gb|EFG50434.1| isopentenyl-diphosphate delta-isomerase [Aerococcus viridans ATCC 11563] Length = 355 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 164/304 (53%), Gaps = 9/304 (2%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ +H +L F+ +D S ++ P I++MTGG+ + ++IN A A + Sbjct: 28 FESVRFVHPSLSHQEFNNIDLSTTLFKQQFDRPFYINAMTGGS-EWTKKINGMFAEVARE 86 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA GS D + SF + R P+ L++N+GA D ++ A +AV +L Sbjct: 87 CHLPMASGSVSAALKDPSVADSFTIIRDVNPNGFLMANVGA-----DKTLEDAKRAVDLL 141 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI+ P G+ +F L I + +D P+++KEVG G+S + Sbjct: 142 DADALQIHLNTAQEIVMPEGDRDFRKLEDNIVAIVEKLDRPVMVKEVGFGMSYQTMHHLQ 201 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G+ D++G GGT++++IE+ R + + DWG T +SL A+P ++ +AS Sbjct: 202 SLGVNTIDVSGTGGTNFAKIENARREHQEFAYM-ADWGQSTVISLLEAQPLMSQTAIVAS 260 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+++ + ++K++ LGAS G++ FL + + DA + ++S ++ + M +L + Sbjct: 261 GGIKDPMQMMKALALGASAVGMSGQFLHSVLGEGVDATIEMVKSYDEQLRLLMMVLDCQN 320 Query: 324 VQEL 327 + EL Sbjct: 321 LNEL 324 >gi|268319450|ref|YP_003293106.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii FI9785] gi|262397825|emb|CAX66839.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii FI9785] Length = 341 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 171/314 (54%), Gaps = 14/314 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+ HLI ALPE + S E ++S P I++MTGG++ IN+ LA AA Sbjct: 27 FNHVHLIRPALPESAVSRDSISTEMFDHQISAPFFINAMTGGSDTSY-TINQRLAKAAAA 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA+GS ++ + + IKSFE+ RQ P ++ +N+ N + A + V L Sbjct: 86 ENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFANV-----NPTTDPKVAQKIVDAL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ L +HLN +QE + P G+ +F + + + + +DVP+++KEVG G+ + L Sbjct: 141 DANALQIHLNSVQEAVMPEGDRDFHWIDN-LKEIRDTVDVPIIIKEVGMGIDPESLRTLL 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + D+ G GGT++++IE+ R + + +D G+ T +L AR IA+ Sbjct: 200 INDFSIIDLGGSGGTNFAQIENERRKTQKLNFL-EDIGLSTVKTLLAARTIPVNKTIIAA 258 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG+ N +DI KS++LGA G+A+ FL+ A S+ ++AAI++L+ E + L G + Sbjct: 259 GGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETLIAAIQNLKYELKLLTALFGLDHI 318 Query: 325 QEL-----YLNTAL 333 ++ YL+T L Sbjct: 319 SKVDEVKYYLDTDL 332 >gi|194468006|ref|ZP_03073992.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri 100-23] gi|194452859|gb|EDX41757.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri 100-23] Length = 347 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 166/290 (57%), Gaps = 11/290 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISS 63 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I + Sbjct: 8 RKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYIEA 67 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+++ + +IN+ LA A K +AMA GS ++ D + SFE+ R+ P ++ +N Sbjct: 68 MTGGSDQAL-KINQQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIFAN 126 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A + + +A A+ +L A+ L LH+N QE+I P G+ +F L + I L S + Sbjct: 127 LSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDFNWLDN-IQYLVSEL 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + + DWG Sbjct: 181 EVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINFESLL-DWG 239 Query: 243 IPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 TP S LE + + IASGG+ + +D++K+ +LGA G+A FL Sbjct: 240 QTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFL 289 >gi|322390281|ref|ZP_08063810.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 903] gi|321143012|gb|EFX38461.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 903] Length = 334 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 171/328 (52%), Gaps = 14/328 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D + F G+ P Sbjct: 1 MSENRKDQHIRYALEQSS---SYNSFDEIELIHRSLPLVDLAEIDLTTHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+ +++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAGLKDPND-QSYAVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + D G++ + +H L L +H+N +QE++ P G F + Sbjct: 116 TNIG-IDKEPDLGLRTVEE-LHPLF---LQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L +GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFPVPVVLKEVGFGMDPKTVQAALDAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEVLASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ ++ +++ + + LG + ++EL Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKEL 315 >gi|315303053|ref|ZP_07873760.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria ivanovii FSL F6-596] gi|313628574|gb|EFR97000.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria ivanovii FSL F6-596] Length = 358 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/338 (30%), Positives = 185/338 (54%), Gaps = 22/338 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ DD LI ++P + E+D + ++FP Sbjct: 12 RKDEHVAL-----GVKQNEQLGKSSLDDIQLIGTSIPRYNVREIDLTTTICKTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A++ + MAVGSQ + I ++++ R PH V+ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAKEVGIPMAVGSQSAALKNSALIDTYQVVRDVNPHGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ L +H+NP QE++ G+ +F+ +I Sbjct: 126 LANVSP-----EVKIEDGLRAVEMLEANALQIHINPAQELVMQEGDRSFSHWQERIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG GL+ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KISPVPIIVKEVGFGLTRETVTSLTNIGVQTVDLAGKGGTNFAQIENDRRRDHAYDFLL- 239 Query: 240 DWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 DWG+ T + L+M E F++SGG+R+ +DI+KS+ LGA+ G+A + D Sbjct: 240 DWGVTTGQALLDMQHADAPEVAFLSSGGIRSPLDIVKSLALGANSVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLG-TKRVQELYLNTALI 334 + +A +E L KE + +F+L K + EL T+LI Sbjct: 300 VEKTIAKLE-LWKEQLRGLFVLADAKNITELK-QTSLI 335 >gi|195978202|ref|YP_002123446.1| isopentenyl pyrophosphate isomerase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974907|gb|ACG62433.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 330 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 18/329 (5%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKF--FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK DHI + + + FDD LIH +LP ++D S F G FP Sbjct: 1 MTNRKDDHIT-----HALSYHSPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPF 55 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 I++MTGG+ K + +N LA A T + M GS + SF++R AP L Sbjct: 56 YINAMTGGSKKG-QAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQVRGVAPDLQL 113 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 114 ATNIG-----LDKAVGLGIRAVEEMKPLFLQVHVNAMQELLMPEGERSFKHWKDHLAAYA 168 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R Sbjct: 169 KQLSVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNRP---YLD 225 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ Sbjct: 226 DWGQTTVQCLLNAKDLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVMLELVETYPV 285 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + S ++E + M L + + +L Sbjct: 286 EQVITVVNSWKEELRLIMCALDCRTLSDL 314 >gi|313623846|gb|EFR93967.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria innocua FSL J1-023] Length = 358 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 181/332 (54%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N+ +D LI ++P + ++D + FLG + FP Sbjct: 12 RKDEHVAL-----GVKQNENLAPSSLEDIQLIGISIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVGIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVSP-----EVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGVTTVDLAGKGGTNFAQIENDRRRDQAYNFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALMDMQHVDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 D V IE L KE + +F+L K + EL Sbjct: 298 DGVSKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|227498499|ref|ZP_03928645.1| isopentenyl-diphosphate delta-isomerase [Acidaminococcus sp. D21] gi|226903957|gb|EEH89875.1| isopentenyl-diphosphate delta-isomerase [Acidaminococcus sp. D21] Length = 349 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 107/329 (32%), Positives = 177/329 (53%), Gaps = 15/329 (4%) Query: 5 RKIDHINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLG-KKLSFPLLIS 62 RK+DHI +C G F D HL+H L I +EVD + G L+ P++I+ Sbjct: 7 RKLDHIRYALCVGDG--PCASGFSDVHLLHHCLSGICRNEVDLTCLLPGLPALAHPIIIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 ++TGG + + +IN +LAI A +T AMAVGSQ S+ + R+ P ++ + Sbjct: 65 AITGGADA-VAKINESLAIVARETGSAMAVGSQFGTVRTGLHRDSYTIVRKCNPKGLIFA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NL A V++A A+ ++ AD L +HLNP QE+ G+ +F++ S I + Sbjct: 124 NLSAFA-----SVEQAKAAIDMISADALQIHLNPAQELAMEEGDRDFSNCLSHIEAMVQG 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KE GCG++ + + L G+ DI G GGT++ IE R E + + +W Sbjct: 179 VGVPVIVKETGCGMAKKEAQDLLDVGVTLLDIGGAGGTNFPAIEHQRYPEGNEEL--SEW 236 Query: 242 GIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 GIPT LS L + + IASGG+R+ +D++K+ +LGAS +A L K + ++ Sbjct: 237 GIPTVLSLLSVVQTVGWGNGVIASGGIRSALDVVKAQVLGASAVAMAGNLLQKIQQEGTE 296 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + ++ L + + LLG + ++L+ Sbjct: 297 ETIHFLQRLLNKVLDFYTLLGCRTFRDLH 325 >gi|15212073|emb|CAC51373.1| putative carotenoid biosynthesis protein [Lactobacillus helveticus] Length = 338 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 95/268 (35%), Positives = 157/268 (58%), Gaps = 12/268 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE D+ + E K +S P I++MTGG+ + + +N+ L A + Sbjct: 27 FDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFFINAMTGGSKQSL-IVNQALGKIAHQ 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A+A+GS ++ + + ++SF + R + VLI N+ N + + Q + L Sbjct: 86 EKIALALGSASILAKEKDQLESFYVARDEDANGVLIVNV-----NPETPINAIKQTIKEL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN +QEI P G+ NF L +I + + +P+++KEVG GL I L Sbjct: 141 QADALQIHLNTVQEIAMPEGDRNFIWLD-QIKNILDQITIPVIIKEVGFGLDQNSIHLLK 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++GI++FD+AG GG ++++IE+ R+ + D+ + +D G+PT +S MA+ FI S Sbjct: 200 ENGIKFFDVAGSGGINFAQIENARN-DHDVSYL-EDIGLPTVISALMAQKES--VNFIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK 292 GG+RN +DILK + LG G+++ FL+ Sbjct: 256 GGVRNPLDILKGLSLGGQFVGISNVFLQ 283 >gi|153799374|gb|ABS50445.1| NapT3 [Streptomyces aculeolatus] Length = 380 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 165/339 (48%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DH+ + + FD+ +H AL I +V + F G PL Sbjct: 1 MSGQRKDDHVRLAMEQHRARSGINQFDEVSFVHHALAGIDRPDVSLATAFAGIHWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ K E INRNLA AA + V +A GS D + +F LR + P + Sbjct: 61 INAMTGGSVKTGE-INRNLATAAREAGVPIASGSMNAYLKDPSCADTFRVLRTHNPRGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V A +A+ +L AD L +H+N QE P G+ +FA +I ++ Sbjct: 120 MANINATTT-----VDGAQRAIDLLQADALQIHINTAQETPMPEGDRSFASWGPQIHKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GLS + G+ D++GRGGT ++RIE+ R +D Sbjct: 175 AAVDIPVIVKEVGNGLSRQSVHTLAALGVTAADVSGRGGTDFARIENGRREHADYAF-LT 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG T L A+ +ASGG+R +D+ +++ LGA G + FL+ D Sbjct: 234 GWGQSTAACLLDAQDAT--IPLLASGGVRTPLDVARALALGAVAVGSSGGFLRTLTDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+V + + + +LG +L LI Q Sbjct: 292 GALVTQLTTWLDQLAALQTMLGAPTPADLTRCDLLIHGQ 330 >gi|116333507|ref|YP_795034.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis ATCC 367] gi|122269806|sp|Q03S19|IDI2_LACBA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116098854|gb|ABJ64003.1| Isopentenyl diphosphate isomerase [Lactobacillus brevis ATCC 367] Length = 345 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 112/339 (33%), Positives = 179/339 (52%), Gaps = 17/339 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K +F D +H++LPEIS +VD S + L PL+I +M Sbjct: 9 RKDEHLSLAEKFYTPTATSQF-DQLRFVHQSLPEISLTDVDFSTQLGPLSLKVPLMIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 TGG+ + +N L A T +A+A GSQ + D AI +F LR+ P ++ +N+ Sbjct: 68 TGGSPR-TGVVNAQLGRIAAATGMAVASGSQSIALKDEQAIPTFTSLRENNPDGLVFANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA +D V+ A AV +L A+ L +H+N QE++ P G+ +F L I + +A+D Sbjct: 127 GA---GHD--VRAAKHAVQMLAANALEIHVNTAQELVMPEGDRDFHWLD-HIGNIVAALD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ ++ G++ D+ GRGGT++ IE+ R + ++ WG Sbjct: 181 VPVIVKEVGFGMAQETLQKLQHVGVKLVDLGGRGGTNFVDIENFRRHQKELN-YLDTWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 T SL AR + Q IA+GG+R +D K++ LGA + G A L + + +A Sbjct: 240 STVESLFEARQQPD-LQVIATGGIRQPLDAAKALALGARVVGSAGQILHSLIKTDEATTT 298 Query: 304 A-IESLRKEFIVSMFLLGTK-----RVQELYLNTALIRH 336 A + + M LLGT R Q L L+ LI + Sbjct: 299 AMLLDWQVGLRTIMTLLGTTDLTQLRQQRLLLSPELINY 337 >gi|116872815|ref|YP_849596.1| isopentenyl pyrophosphate isomerase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466260|sp|A0AII5|IDI2_LISW6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116741693|emb|CAK20817.1| isopentenyl-diphosphate delta-isomerase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 358 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/339 (30%), Positives = 185/339 (54%), Gaps = 24/339 (7%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ DD LI ++P + ++D + G +S P Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLDDIQLIGTSIPRYNVKDIDLTTTIFGVNVSLPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN +LA A + + MAVGSQ + + + ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAREVAIPMAVGSQSAALKNSSLMDTYQIVREVNPSGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + VQ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 MANVSP-----EVAVQDGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLARIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KRSPVPIIVKEVGFGMTRETVKTLREVGVETVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T SL +M + ++ASGG+RN +DI+KS+ LGA G+A + Sbjct: 240 DWGISTGQSLIDMQHIDAPKIAYLASGGIRNPLDIVKSLALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 D V IE L KE + +F+L K + EL T+LI Sbjct: 298 DGVSNTIEKLELWKEQLRGLFVLADAKNIAELK-ETSLI 335 >gi|157692788|ref|YP_001487250.1| isopentenyl pyrophosphate isomerase [Bacillus pumilus SAFR-032] gi|166918474|sp|A8FEM3|IDI2_BACP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157681546|gb|ABV62690.1| isopentenyl-diphosphate delta-isomerase [Bacillus pumilus SAFR-032] Length = 355 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 179/309 (57%), Gaps = 9/309 (2%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 D +H LP+++ ++D G P+ I++MTGG K INR+L+IAA++T Sbjct: 27 DVSFVHVGLPDLATSQIDTHTTIGGLTFGSPIFINAMTGGGGKSTYEINRSLSIAAKETN 86 Query: 88 VAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + +AVGSQ D +++E+ R+ P+ ++ +NLG+ + +++A +AV +L A Sbjct: 87 IPVAVGSQMAALKDKEERRTYEVVRKVNPNGIVFANLGS-----EATIKQAKEAVEMLEA 141 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + L +HLN +QEI+ P G+ +F +IA ++ ++ VP+++KEVG G+S + + Sbjct: 142 NMLQIHLNVIQEIVMPEGDRDFRGALERIAAIAESVGVPVVVKEVGFGMSKETAKKLFHA 201 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ DI G GGT++S+IE+ R ++ F WGIPT SL + +ASGG Sbjct: 202 GVAAVDIGGFGGTNFSKIENLRRQKAL--HYFDQWGIPTAASLAEVHTSFPDQTVLASGG 259 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQ 325 +++ +D+ KSI LGAS GLA FLK D + ++A + L+++ + M +LG K ++ Sbjct: 260 IQDALDVTKSIALGASAAGLAGFFLKSLTDGGEKGLIADMIDLQEDVKMMMTVLGAKTIE 319 Query: 326 ELYLNTALI 334 EL +I Sbjct: 320 ELRQTQVVI 328 >gi|322411587|gb|EFY02495.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 330 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP +++ S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNAFDDMELIHHSLPSYDVADIELSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + + S+ L + A L + Sbjct: 58 NAMTGGSQKG-KAVNEKLAKVAAATGIVMVTGSYSAALKNPSD-DSYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D ++ A Q V + L +H+N +QE++ P G F +A S Sbjct: 116 NIGL-----DKPIELAQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYVSQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVNTIKMAHELGIQTFDISGRGGTSFAYIENQRGLDRS---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVDILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ + +++ + M L + +Q+L Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDL 314 >gi|42516881|emb|CAD92063.1| isopentenyl diphosphate isomerase type 2 [Halobacterium salinarum] Length = 225 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 17/231 (7%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHT 117 I SMTGG++ E INR LA AA +T +AM +GSQR + D ++S+ + R AP Sbjct: 1 IDSMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I Sbjct: 60 FIYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------E 231 +S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 119 VSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQ 178 Query: 232 SDIGIVFQDWGIPTPLS-LE-MARPYCNEAQFIASGGLRNGVDILKSIILG 280 IG +F++WGIPT S +E +A C IASGG+R G+D+ K+I LG Sbjct: 179 KQIGTLFREWGIPTAASTIECVAEHDC----VIASGGVRTGLDVAKAIALG 225 >gi|313608891|gb|EFR84660.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria monocytogenes FSL F2-208] Length = 358 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/339 (28%), Positives = 185/339 (54%), Gaps = 23/339 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + LG + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAASSLEDIQLIGTSIPRYNVKDIDLTTTILGSNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 + V IE L KE + S+F+L K + EL +I Sbjct: 298 EGVTKTIEKLELWKEQLRSLFVLADAKNITELKTTPLII 336 >gi|294790201|ref|ZP_06755359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Scardovia inopinata F0304] gi|294458098|gb|EFG26451.1| isopentenyl-diphosphate delta-isomerase, type 2 [Scardovia inopinata F0304] Length = 354 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 107/328 (32%), Positives = 162/328 (49%), Gaps = 26/328 (7%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 D IH +LPEIS D+VD S + G + + P I++MTGG ++ IN LA A + Sbjct: 13 LDSCEFIHTSLPEISIDQVDISTDLAGIRQNKPFFINAMTGGT-ELTNEINMKLAQVAGR 71 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T MA+GS ++ + L+Q P I+NLGA + + A V + Sbjct: 72 TGTLMALGSMSILVKKPQVRDLYRRLKQENPQVSFIANLGA-----EHSPESALAVVEAV 126 Query: 145 GADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 A L +H+NP QEI+ P G+ +F D + IA+ +P++ KEVG G+S + Sbjct: 127 DAQALQIHINPAQEIVMPEGSRDFRGWVDNITNIAIAMRERSIPVIAKEVGFGMSRQTAQ 186 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHR----------DLESDIGI----VFQDWGIPTPL 247 + ++GI Y D+AG+GGT++ IE+ R E +GI + WGI T Sbjct: 187 ILKEAGITYIDVAGKGGTNFITIENARLREKQGRSSGQTEPRLGISDFSYLKSWGISTLR 246 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIE 306 SL R IASGG+RN +D +K + LGA GL+ FL M + V +E Sbjct: 247 SLIEVRGVEGIVP-IASGGVRNPLDAIKYLALGARTIGLSGIFLDSVMTRGIEGTVDLVE 305 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + LLG + +QEL + ++ Sbjct: 306 TWQDHIQRIFTLLGVRTIQELQEKSRMV 333 >gi|194016772|ref|ZP_03055385.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus pumilus ATCC 7061] gi|194011378|gb|EDW20947.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus pumilus ATCC 7061] Length = 355 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 180/309 (58%), Gaps = 9/309 (2%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 D +H +LP+++ ++D G P+ I++MTGG K INR+L+IAA++T Sbjct: 27 DVSFVHASLPDLATSQIDTHSTIGGLTFGSPIFINAMTGGGGKSTYEINRSLSIAAKETN 86 Query: 88 VAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + +AVGSQ D +++E+ R+ P ++ +NLG+ + +++A +AV +L A Sbjct: 87 IPVAVGSQMAALKDKEERRTYEVVRKVNPDGIVFANLGS-----EATMKQAKEAVEMLEA 141 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + L +HLN +QEI+ P G+ +F +IA ++ ++ VP+++KEVG G+S + + Sbjct: 142 NMLQIHLNVIQEIVMPEGDRDFRGALERIAAINESVGVPVVVKEVGFGMSKETAKKLFHA 201 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ D+ G GGT++S+IE+ R ++ F WGIPT SL + +ASGG Sbjct: 202 GVAAVDVGGFGGTNFSKIENLRRQKAL--HYFDQWGIPTAASLAEVHTSFPDQTILASGG 259 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 +++ +D+ KSI LGAS GLA FLK D ++ ++A I L+++ + M +LG K ++ Sbjct: 260 IQDALDVTKSIALGASAAGLAGFFLKSLTDGGESGLIANIIDLQEDVKMMMTVLGVKTIE 319 Query: 326 ELYLNTALI 334 EL +I Sbjct: 320 ELRQTQVVI 328 >gi|224499959|ref|ZP_03668308.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes Finland 1988] Length = 358 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 180/332 (54%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ D LI ++P + ++D + GK + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ + R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVSP-----EVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 + V IE L KE + +F+L K + EL Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|325568462|ref|ZP_08144829.1| isopentenyl diphosphate isomerase [Enterococcus casseliflavus ATCC 12755] gi|325158231|gb|EGC70384.1| isopentenyl diphosphate isomerase [Enterococcus casseliflavus ATCC 12755] Length = 346 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 168/308 (54%), Gaps = 17/308 (5%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD L+H++ P+I +V + + S P I++MTGG+ K + +IN+ LA A+ Sbjct: 22 FDAVRLVHQSFPQIDVADVAITTTVFDRSFSSPFFINAMTGGSEKTL-KINQELAEIAQA 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA GS D + SF + R+ P L++N+GA V+ A +AV + Sbjct: 81 CDLMMATGSVSAALKDPSVADSFRIVRKANPDGFLLANIGA-----GSPVENAQRAVELF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 GAD L +HLN QE++ P G+ F+ S + +++ VP+++KEVG G+S I+ L Sbjct: 136 GADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTIASVAVPVVIKEVGFGMSRKTIQQLL 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL----EMARPYCNEAQ 260 G++ D+AG GGTS+++IE+ R + ++ + +G T +SL E+ +P+ Sbjct: 196 AIGVQTIDVAGSGGTSFTQIENARRKKRELAYL-DTFGQSTVISLLEANEIQQPFTR--- 251 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLL 319 IASGG+R+ DI K++ LGA GL++ L + + +A ++S +++ + + Sbjct: 252 -IASGGVRDAYDIFKALCLGADSVGLSATILVLLLSKGKEETIATLQSWKEQLQLLYTMA 310 Query: 320 GTKRVQEL 327 G ++L Sbjct: 311 GQTSTKDL 318 >gi|16803423|ref|NP_464908.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes EGD-e] gi|224501673|ref|ZP_03669980.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL R2-561] gi|20978477|sp|Q8Y7A5|IDI2_LISMO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|16410799|emb|CAC99461.1| lmo1383 [Listeria monocytogenes EGD-e] Length = 358 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 180/332 (54%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ D LI ++P + ++D + GK + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ + R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVSP-----EVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 + V IE L KE + +F+L K + EL Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|47095967|ref|ZP_00233570.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 1/2a F6854] gi|254827644|ref|ZP_05232331.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N3-165] gi|254829858|ref|ZP_05234513.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 10403S] gi|254898451|ref|ZP_05258375.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes J0161] gi|254912058|ref|ZP_05262070.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes J2818] gi|254936385|ref|ZP_05268082.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes F6900] gi|284801769|ref|YP_003413634.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5578] gi|284994911|ref|YP_003416679.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5923] gi|47015713|gb|EAL06643.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 1/2a F6854] gi|258600023|gb|EEW13348.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N3-165] gi|258608976|gb|EEW21584.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes F6900] gi|284057331|gb|ADB68272.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5578] gi|284060378|gb|ADB71317.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5923] gi|293590025|gb|EFF98359.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes J2818] Length = 358 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 180/332 (54%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ D LI ++P + ++D + GK + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ + R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVSP-----EVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 + V IE L KE + +F+L K + EL Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|217964470|ref|YP_002350148.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase)(Isopentenyl pyrophosphate isomerase) [Listeria monocytogenes HCC23] gi|254803426|sp|B8DFU4|IDI2_LISMH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|217333740|gb|ACK39534.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase)(Isopentenyl pyrophosphate isomerase) [Listeria monocytogenes HCC23] gi|307570965|emb|CAR84144.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes L99] Length = 358 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 185/339 (54%), Gaps = 23/339 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + +G + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L AD L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLTRIEKYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 + + IE L KE + S+F+L K + EL +I Sbjct: 298 EGLTKTIEKLELWKEQLRSLFVLADAKNISELKTTPLII 336 >gi|329769192|ref|ZP_08260612.1| isopentenyl-diphosphate delta-isomerase [Gemella sanguinis M325] gi|328839411|gb|EGF88989.1| isopentenyl-diphosphate delta-isomerase [Gemella sanguinis M325] Length = 317 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/325 (29%), Positives = 158/325 (48%), Gaps = 19/325 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D + D + + + ++P D +D S KK FP I+++ Sbjct: 2 RKKDHIRLALADKTTLTS---LDAYAIDYNSVPRFGLDNLDTSTTICNKKWQFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G + +IN++ +E + GS D N ++ + Y+ Sbjct: 59 TAGGEE-CNKINQDFMEVSEACGIEFFPGSYSPALKDKNDEAAYP-KGYS---------- 106 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + L D A+ A + LH NPLQEI+ P G+ NF S + +S + Sbjct: 107 -INLGLDKDPNLILDAIEKTKAQYIQLHTNPLQEIVMPEGDHNFESWLSTLTEVSKKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + + D++G GGT+++RIE+ R D ++ G Sbjct: 166 PVILKETGFGMNEETIKLAIDLNLAAVDVSGMGGTNFARIENGR--REDKSTYLENIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE A PY ++ IASGG+RN +D++K + LGA G++ FL+ + D +A++ Sbjct: 224 TAESLEFATPYRDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKTFLEILVNDGKEALID 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQELY 328 IE +KE M L+ K + ELY Sbjct: 284 EIEKWKKELKFLMILMNAKNIDELY 308 >gi|46907611|ref|YP_014000.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes serotype 4b str. F2365] gi|254824557|ref|ZP_05229558.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J1-194] gi|254852570|ref|ZP_05241918.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL R2-503] gi|254932568|ref|ZP_05265927.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes HPB2262] gi|254994362|ref|ZP_05276552.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J2-064] gi|255521770|ref|ZP_05389007.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J1-175] gi|300766403|ref|ZP_07076360.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N1-017] gi|67460883|sp|Q71ZT7|IDI2_LISMF RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|46880879|gb|AAT04177.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes serotype 4b str. F2365] gi|258605882|gb|EEW18490.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL R2-503] gi|293584127|gb|EFF96159.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes HPB2262] gi|293593796|gb|EFG01557.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J1-194] gi|300512907|gb|EFK39997.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N1-017] gi|328466769|gb|EGF37887.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 1816] gi|332311824|gb|EGJ24919.1| Isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. Scott A] Length = 358 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 186/339 (54%), Gaps = 23/339 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + +G + FPL Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 + V IE L KE + +F+L K + EL +I Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNISELKTTPLII 336 >gi|222152929|ref|YP_002562106.1| isopentenyl pyrophosphate isomerase [Streptococcus uberis 0140J] gi|222113742|emb|CAR41738.1| isopentenyl-diphosphate delta-isomerase [Streptococcus uberis 0140J] Length = 330 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 161/327 (49%), Gaps = 14/327 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ DE++ S + + FP I Sbjct: 1 MTNRKNDHIKYALK---YQSSYNSFDDMELIHSSLPKYDVDEIELSTHYAQQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS + S+ L+ AP+ L + Sbjct: 58 NAMTGGSEKG-KAVNAKLARVAQATGIPMVTGSYSAALKNPQD-DSYRLKDIAPNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G L+ D + Q V + L +H+N +QE++ P G F + + Sbjct: 116 NIG---LDKDICL--GMQTVSEMNPIFLQVHVNVMQELLMPEGERQFKHWRQHLKEYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+ GI+ FDI+GRGGTS++ IE+ R W Sbjct: 171 IPVPIILKEVGFGMDVKTIQTAQALGIQTFDISGRGGTSFAYIENQRGGNRS---YLDQW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T L + N+ + +ASGG+R+ +D++K +LGA GL+ FL+ + Sbjct: 228 GQSTVQCLLNCKDLVNQVEILASGGVRHPLDMIKCFVLGARAVGLSRTFLELVETYHEEE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ I +++ M L K + +L Sbjct: 288 VIEIINGWKEDLKRIMCALNCKTIADL 314 >gi|290894504|ref|ZP_06557459.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J2-071] gi|290555939|gb|EFD89498.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J2-071] Length = 358 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 184/339 (54%), Gaps = 23/339 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + +G + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L AD L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 + V IE L KE + +F+L K + EL +I Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLADAKNISELKTTPLII 336 >gi|57753873|dbj|BAD86803.1| isopentenyl diphosphate isomerase [Streptomyces sp. KO-3988] Length = 363 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 164/336 (48%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DH+ + + FD+ +H AL I +V F G PL Sbjct: 1 MSVQRKDDHVRLAIEQQDTRSGINQFDEVSFVHHALAGIDRPQVSLGTSFAGISWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG + INR LA AA +T V +A GS D +F LR+ PH + Sbjct: 61 INAMTGGTART-GVINRGLATAARETGVPLASGSVHAYLKDPTCADTFRVLRRENPHGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ N V +A+ +L AD L +H+N QE P G+ +F S+I ++ Sbjct: 120 MANV-----NATASVADTRRAIDLLEADALQIHVNTAQETAMPEGDRSFGSWVSQIEKIT 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GLS + + G+ D+ GRGGT ++RIE+ R D Sbjct: 175 AAVDLPVIVKEVGNGLSRETVLTLRQLGVSVADLGGRGGTDFARIENGRRPLGDYAF-LH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T L A+ +ASGG+R+ +D +++ LGAS G + F + +D Sbjct: 234 DWGQSTAACLLDAQGAG--LPVLASGGVRHPLDAARALALGASGVGASGVFPRTLLDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A++A I + + +LG + EL LI Sbjct: 292 EALIAQITNWLDQLAALQTMLGARTPAELASKDLLI 327 >gi|226223984|ref|YP_002758091.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes Clip81459] gi|259491445|sp|C1L2T9|IDI2_LISMC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|225876446|emb|CAS05155.1| Putative isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 358 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 186/339 (54%), Gaps = 23/339 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + +G + FPL Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREAAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQELYLNTALI 334 + V IE L KE + +F+L K + EL +I Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNISELKTTPLII 336 >gi|22537470|ref|NP_688321.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae 2603V/R] gi|77409182|ref|ZP_00785894.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae COH1] gi|22534348|gb|AAN00194.1|AE014252_17 isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 2603V/R] gi|77172228|gb|EAO75385.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae COH1] Length = 331 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 164/328 (50%), Gaps = 16/328 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSHYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS A+K+ E Y P T L Sbjct: 58 NAMTGGSEKG-KAVNHKLAQVAQATGIVMVTGSYSA------ALKNDEDDSY-PTTDLYP 109 Query: 122 NLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +L A + D V A V + L +H+N +QE++ P G F S + Sbjct: 110 DLKLATNIGLDKPVPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVD 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + Sbjct: 170 NIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRS---YLNT 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 227 WGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVD 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + S +++ + M L K++ +L Sbjct: 287 DVIAILNSWKEDLRMIMCALNCKKITDL 314 >gi|255027073|ref|ZP_05299059.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J2-003] Length = 358 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 179/332 (53%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ D LI ++P + ++D + GK + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + I ++ + R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAATKKRSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVSP-----EVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 + V IE L KE + +F+L K + EL Sbjct: 298 EGVTKTIEKLELWKEQLRGLFVLANAKNIAEL 329 >gi|312190951|gb|ADQ43376.1| type II isopentenyldiphosphate isomerase [Streptomyces cinnamonensis] Length = 363 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 110/340 (32%), Positives = 174/340 (51%), Gaps = 19/340 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DH+ + + FD+ +H AL I +V + F G PL Sbjct: 1 MISQRKDDHVRLAVEHQRQHSGHNQFDEVSFVHHALAGIDRPDVSLATTFAGISWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ INR+LAIAA +T VA+A GS F D + +F LR+ P + Sbjct: 61 INAMTGGSVST-GIINRDLAIAARETGVAVASGSMSAYFKDPSCADTFSVLRKENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ N V K +A+ ++ AD L +H+N QE P G+ +FA +I ++ Sbjct: 120 LANV-----NATASVDKVQRAIDLVRADALQIHINTAQETPMPEGDRSFASWVPQIEKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 SA++VP+++KEVG GLS + L G++ D+ GRGGT ++RIE+ R + + Sbjct: 175 SAVEVPVIVKEVGNGLSRETVLLIESLGVQVADLGGRGGTDFARIENGRRELGEYAFM-H 233 Query: 240 DWGIPTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 WG T L ++ P +ASGG+RN +D+ +++ LGAS G + FL+ Sbjct: 234 GWGQSTAACLLDNQDVGIP------VLASGGVRNALDVARALALGASGVGASGGFLRTLK 287 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D A++A I + + +LG + EL LI Sbjct: 288 DEGVSALIAQISTWLDQLAALQTMLGARTPAELTRCDLLI 327 >gi|289434665|ref|YP_003464537.1| isopentenyl-diphosphate delta-isomerase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170909|emb|CBH27451.1| isopentenyl-diphosphate delta-isomerase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 358 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/331 (29%), Positives = 181/331 (54%), Gaps = 21/331 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ DD LI ++P + ++D + G ++FP Sbjct: 12 RKDEHVAL-----GVKQNEQLGKSSLDDIQLIGTSIPRYNVRDIDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A++ V MAVGSQ +++ I ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAKEVGVPMAVGSQSAALKNNSLIDTYQVVRHINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVSP-----EVELKDGLRAVEMLQANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 DWG+ T + L+M P + F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPAAPKIAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMF-LLGTKRVQEL 327 + +A E L KE + +F LL K + EL Sbjct: 300 VEKTIAKFE-LWKEQLRGLFVLLDAKNIAEL 329 >gi|76788146|ref|YP_329964.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae A909] gi|77406860|ref|ZP_00783888.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae H36B] gi|77414068|ref|ZP_00790237.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 515] gi|76563203|gb|ABA45787.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae A909] gi|77159866|gb|EAO71008.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 515] gi|77174533|gb|EAO77374.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae H36B] Length = 331 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 164/328 (50%), Gaps = 16/328 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + MA GS A+K+ E Y P T L Sbjct: 58 NAMTGGSEKG-KAVNHKLAQVAQATGIVMATGSYSA------ALKNDEDDSY-PTTDLYP 109 Query: 122 NLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +L A + D + A V + L +H+N +QE++ P G F S + Sbjct: 110 DLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVD 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + Sbjct: 170 NIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRS---YLNT 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 227 WGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRAVLELVERYPVD 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + S +++ + M L K++ +L Sbjct: 287 DVIAILNSWKEDLRMIMCALNCKKITDL 314 >gi|312865082|ref|ZP_07725310.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus downei F0415] gi|311099193|gb|EFQ57409.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus downei F0415] Length = 334 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 161/303 (53%), Gaps = 10/303 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD+ LI +LP+ +++ F G+ FP I++MTGG+ K + +N+ LA AE Sbjct: 22 FDEVELIQSSLPKYDLADIELKTHFAGRDWDFPFYINAMTGGSAKA-KAVNQKLAQVAES 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + GS + S+++R AP+ +L +N+G D V + V L Sbjct: 81 CGLLFITGSYSPALKNPED-DSYDVRLVAPNVLLGTNIG-----LDKPVDLGQRVVEDLQ 134 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 L +H+N +QE++ P G F + S +A + + VP++LKEVG G+ ++ GL+ Sbjct: 135 PLLLQVHVNLMQELLMPEGEREFKNWPSNLADYAQKISVPVILKEVGFGMDKKTVQTGLE 194 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 GI+ FDI+GRGGTS++ IE+ R E D + WG T +L EA+ +ASG Sbjct: 195 LGIKTFDISGRGGTSFAYIENQRS-ERDRSYL-NTWGQSTVQTLLNLGELKEEAEILASG 252 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RN +D++K+++LGA GL+ L + V+A +E + + + M L ++ + Sbjct: 253 GVRNPLDMIKALVLGAKAVGLSRTMLDLVERYPVEKVIAIVEGWKDDLCLLMCALNSRTI 312 Query: 325 QEL 327 +L Sbjct: 313 DDL 315 >gi|116511267|ref|YP_808483.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris SK11] gi|116106921|gb|ABJ72061.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. cremoris SK11] Length = 349 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 15/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K +RN+ F D +I LPE+S ++V+ S + G+ FP I Sbjct: 12 RKDEHLSLAYKYWKEERNQTLGLTFSDVRIIPNTLPELSTEKVELSSKVFGQDFEFPFYI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 +MTGG + ++IN+ LA A+ +AMAVGSQ + F E+R+ L Sbjct: 72 EAMTGGGERA-DKINQTLAEIAKNQHLAMAVGSQSIALKFPELAAGFKEVRKIHSSGFLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA ++ A +AV ++ A+ L +H+N QE+ G+ F L + I ++S Sbjct: 131 ANLGA-----GHSLENAKRAVEMIEANALEIHVNTAQELPMDEGDREFYWLEN-INEIAS 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S + K+ + ++ G GGT+++ IE R S G D Sbjct: 185 QLEVPVIVKEVGFGISQKTFKELAKTAVSGINVGGAGGTNFAWIERKR---SKNGFDLDD 241 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +G T SL A+ N +A+GG+ + DI KS+ILGA L A LK M + Sbjct: 242 FGFSTLESLLEAKTAENTKSLVATGGISSAQDIFKSLILGADLASSAGFILKNLMQTGPE 301 Query: 301 VVAAIESLRKEFIVSMFLL-GTKRVQE 326 V I K+ + +F+L G+K + E Sbjct: 302 KVEEILEQWKQDLNKLFVLTGSKNIAE 328 >gi|25011435|ref|NP_735830.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae NEM316] gi|77411179|ref|ZP_00787531.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae CJB111] gi|24412973|emb|CAD47052.1| Unknown [Streptococcus agalactiae NEM316] gi|77162797|gb|EAO73756.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae CJB111] Length = 331 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 164/328 (50%), Gaps = 16/328 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + MA GS A+K+ E Y P T L Sbjct: 58 NAMTGGSEKG-KAVNHKLAQVAQATGIVMATGSYSA------ALKNDEDDSY-PTTDLYP 109 Query: 122 NLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +L A + D + A V + L +H+N +QE++ P G F S + Sbjct: 110 DLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVD 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + Sbjct: 170 NIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRS---YLNT 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 227 WGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVD 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + S +++ + M L K++ +L Sbjct: 287 DVIAILNSWKEDLRMIMCALNCKKITDL 314 >gi|76798613|ref|ZP_00780841.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae 18RS21] gi|76586047|gb|EAO62577.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae 18RS21] Length = 331 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 163/328 (49%), Gaps = 16/328 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS A+K+ E Y P T L Sbjct: 58 NAMTGGSEKG-KAVNHKLAQVAQATGIVMVTGSYSA------ALKNDEDDSY-PTTDLYP 109 Query: 122 NLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +L A + D V A V + L +H+N +QE++ P G F S + Sbjct: 110 DLKLATNIGLDKPVPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVD 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + Sbjct: 170 NIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRS---YLNT 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 227 WGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVD 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + S +++ + M L K++ +L Sbjct: 287 DVIAILNSWKEDLRMIMCALNCKKITDL 314 >gi|315282254|ref|ZP_07870704.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria marthii FSL S4-120] gi|313614101|gb|EFR87795.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria marthii FSL S4-120] Length = 358 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 178/332 (53%), Gaps = 23/332 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + G + FP Sbjct: 12 RKDEHVAL-----GVKQNEQLALSSLEDIQLIGTSIPRYNVKDIDLTTTIFGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P V+ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREVNPAGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +AV +L AD L +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVSP-----EVDIQDGLRAVEMLEADALQIHINPAQELVMEEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLAEVGVETVDLAGKGGTNFAQIENDRRRDHAYDFLL- 239 Query: 240 DWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L +M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSL--KK 297 Query: 299 DAVVAAIESL--RKEFIVSMFLLG-TKRVQEL 327 D V IE L E + +F+L K + EL Sbjct: 298 DGVTNTIEKLXXXXEQLRGLFVLADAKNIAEL 329 >gi|42516877|emb|CAD92061.1| isopentenyl diphosphate isomerase type 2 [Halobacterium salinarum] Length = 223 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 136/228 (59%), Gaps = 17/228 (7%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHT 117 I SMTGG++ E INR LA AA +T +AM +GSQR + D ++S+ + R AP Sbjct: 1 IDSMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I Sbjct: 60 FIYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------E 231 +S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 119 VSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQ 178 Query: 232 SDIGIVFQDWGIPTPLS-LE-MARPYCNEAQFIASGGLRNGVDILKSI 277 IG +F++WGIPT S +E +A C IASGG+R G+D+ K+I Sbjct: 179 KQIGTLFREWGIPTAASTIECVAEHDC----VIASGGVRTGLDVAKAI 222 >gi|125623295|ref|YP_001031778.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris MG1363] gi|124492103|emb|CAL97032.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. cremoris MG1363] gi|300070046|gb|ADJ59446.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris NZ9000] Length = 349 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 15/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K +RN+ F D +I LPE+S ++V+ S + G+ FP I Sbjct: 12 RKDEHLSLAYKYWKEERNQTLGLTFSDVRIIPNTLPELSTEKVELSSKVFGQDFEFPFYI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 +MTGG + ++IN+ LA A+ +AMAVGSQ + F E+R+ L Sbjct: 72 EAMTGGGERA-DKINQTLAEIAKNQHLAMAVGSQSIALKFPELAAGFKEVRKIHSSGFLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA ++ A +AV ++ A+ L +H+N QE+ G+ F L + I ++S Sbjct: 131 ANLGA-----GHSLENAKRAVEMIEANALEIHVNTAQELPMDEGDREFYWLEN-INEIAS 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S + K+ + ++ G GGT+++ IE R S G D Sbjct: 185 QLEVPVIVKEVGFGISQKTFKELSKTAVSGINVGGAGGTNFAWIERKR---SKNGFDLDD 241 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +G T SL A+ N +A+GG+ + DI KS+ILGA L A LK M + Sbjct: 242 FGFSTLESLLEAKTAENTKSLVATGGISSAQDIFKSLILGADLASSAGFILKNLMQTGPE 301 Query: 301 VVAAIESLRKEFIVSMFLL-GTKRVQE 326 V I K+ + +F+L G+K + E Sbjct: 302 KVEEILEQWKQDLNKLFVLTGSKNIAE 328 >gi|28378413|ref|NP_785305.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum WCFS1] gi|254556622|ref|YP_003063039.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum JDM1] gi|32129622|sp|Q88WB6|IDI2_LACPL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|28271249|emb|CAD64153.1| isopentenyl diphosphate delta-isomerase [Lactobacillus plantarum WCFS1] gi|254045549|gb|ACT62342.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum JDM1] Length = 348 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/326 (32%), Positives = 170/326 (52%), Gaps = 13/326 (3%) Query: 5 RKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+++ K G N FD + H ALPE + +VD + PL I + Sbjct: 9 RKDEHVSLAEKYFHGEQANA--FDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIEA 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISN 122 MTGG+ + E IN L A + +A GSQ V D +F +R + P+ ++ N Sbjct: 67 MTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKDPQVAPTFATMRDHNPNGLIFGN 125 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA + A A+ +L AD L LHLN +QEI+ P G+ +F L++ I+ L A+ Sbjct: 126 LGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFHWLTN-ISDLVQAL 179 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+G Sbjct: 180 TVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMAY-LHDFG 238 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 + T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D V Sbjct: 239 LTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDEV 298 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 +A + + + L+G RV + Sbjct: 299 IAMLTDWQSQLKRLFALVGVTRVDQF 324 >gi|313637945|gb|EFS03255.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria seeligeri FSL S4-171] Length = 358 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/331 (29%), Positives = 182/331 (54%), Gaps = 21/331 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ DD LI ++P + ++D + G ++FP Sbjct: 12 RKDEHVAL-----GVKQNEQLGKSSLDDIQLIGTSIPRYNVRDIDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN +LA A++ + MAVGSQ +++ I ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAKEVGIPMAVGSQSAALKNNSLIDTYQVVRNINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVSP-----EVELKDGLRAVEMLHANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 DWG+ T + L+M P + F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPDAPKIAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMF-LLGTKRVQEL 327 + +A E L KE + +F LL K + EL Sbjct: 300 VEKTIAKFE-LWKEQLRGLFVLLDAKNIAEL 329 >gi|300767356|ref|ZP_07077268.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495175|gb|EFK30331.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 369 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/326 (32%), Positives = 170/326 (52%), Gaps = 13/326 (3%) Query: 5 RKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+++ K G N FD + H ALPE + +VD + PL I + Sbjct: 30 RKDEHVSLAEKYFHGEQANA--FDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIEA 87 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISN 122 MTGG+ + E IN L A + +A GSQ V D +F +R + P+ ++ N Sbjct: 88 MTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKDPQVAPTFATMRDHNPNGLIFGN 146 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA + A A+ +L AD L LHLN +QEI+ P G+ +F L++ I+ L A+ Sbjct: 147 LGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFHWLTN-ISDLVQAL 200 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+G Sbjct: 201 TVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMAY-LHDFG 259 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 + T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D V Sbjct: 260 LTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDEV 319 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 +A + + + L+G RV + Sbjct: 320 IAMLTDWQSQLKRLFALVGVTRVDQF 345 >gi|284048575|ref|YP_003398914.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidaminococcus fermentans DSM 20731] gi|283952796|gb|ADB47599.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidaminococcus fermentans DSM 20731] Length = 350 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 108/335 (32%), Positives = 177/335 (52%), Gaps = 29/335 (8%) Query: 5 RKIDHINIVC--KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLG-KKLSFPLLI 61 RKIDHI +D F D ++H LP++ +VD SV G LS PL+I Sbjct: 7 RKIDHIKYALHLEDGPCATG---FSDMQVMHCCLPQVDRRKVDLSVSLPGVGTLSQPLVI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ-----RVMFSDHNAIKSFELRQYAPH 116 ++TGG + ++ INR+LA+ A +T AMAVGSQ + +++D + +R+ P Sbjct: 64 DAITGGA-EAVKSINRDLAVVARETGCAMAVGSQYGAVRKGLYADTYQV----VRRENPK 118 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 V+ +N+ A+ ++A +AV ++ A L +HLN QE+ G+ +F+ +IA Sbjct: 119 GVVFANVSALATP-----EEARRAVDMVEAQALEIHLNSAQELAMEEGDRDFSRWLEQIA 173 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + S +VP+++KE GCG++ + L G+ D G GGT++ IE R E + + Sbjct: 174 AICSQSEVPVIVKETGCGMAREEARRLLDCGVSILDTGGAGGTNFPAIEGCRYPEGNREL 233 Query: 237 VFQDWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 WGIP+ LS LE + IASGG+R+ +D+ ++ +LGA+ G+A L+ Sbjct: 234 --SQWGIPSALSLLETVEAKGWQNGIIASGGIRSALDVFRAQVLGANAVGMAGNILRLVR 291 Query: 296 DSSDAVVAAIESLRK--EFIVSMF-LLGTKRVQEL 327 + + AI+ +R+ E + + L G R EL Sbjct: 292 EG--GTLLAIQRIRQLLEAVKDFYTLTGCTRGTEL 324 >gi|258512408|ref|YP_003185842.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479134|gb|ACV59453.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 362 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 164/292 (56%), Gaps = 13/292 (4%) Query: 5 RKIDHINIV--CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++H++ V DP N F+ L+ + PE+++D+V + + G +L P++I+ Sbjct: 9 RKVEHVHAVQALGDPTGVSNG--FECVSLVPCSAPEVAWDDVSLATQLCGIRLESPIIIN 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG +++ + INR LA A + +AMA+GS + ++ + R+ V+I+ Sbjct: 67 AMTGGADEVYD-INRKLAQVARRFGLAMALGSASAGLASPEVAYTYRVVREIHQDGVVIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G +++A QAV ++ AD L +H N QE+ G+ +F +A ++ Sbjct: 126 NVG-----MGTRLERARQAVELVRADLLQVHFNAAQELFMAEGDRDFRGALEALAEVARG 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++ KEVG G+S+ D +G+R D+ G GGT++ +E+ R ++I + W Sbjct: 181 VGVPVVAKEVGQGISAEDAIRFADAGVRAIDVGGLGGTNFITVEAWRR-GAEIDDFWHRW 239 Query: 242 GIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+PT SL E+A A IASGG+R +D+ K++ LGAS G+A P ++ Sbjct: 240 GLPTAASLCEVAAAVGGRADVIASGGIRTALDVAKAMALGASAVGIAGPLVQ 291 >gi|313633334|gb|EFS00181.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria seeligeri FSL N1-067] Length = 358 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 180/331 (54%), Gaps = 21/331 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ DD LI ++P + + D + G ++FP Sbjct: 12 RKDEHVAL-----GVKQNEQLGKSSLDDIQLIGTSIPRYNVRDTDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN +LA A++ + MAVGSQ +++ + ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAKEVGIPMAVGSQSAALKNNSLMDTYQVVRDINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVSP-----EVELKDGLRAVEMLQANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLS-LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 DWG+ T + L+M P F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPAAPNVAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMF-LLGTKRVQEL 327 + +A E L KE + +F LL K + EL Sbjct: 300 VEKTIAKFE-LWKEQLRGLFVLLDAKNIAEL 329 >gi|281490949|ref|YP_003352929.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis KF147] gi|281374707|gb|ADA64227.1| Isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis KF147] Length = 347 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 173/327 (52%), Gaps = 15/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K ++N+ F D +I +LPE+S ++++ S E G+ FP I Sbjct: 11 RKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTEKINFSSEVFGQNFEFPFYI 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 +MTGG + ++INR LA A+ +AMAVGSQ + F E+R+ L Sbjct: 71 EAMTGGTERA-DKINRQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGFLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA ++ A +A+ ++ A+ L +H+N QE+ G+ F L + I ++S Sbjct: 130 ANIGA-----GHSLENAKRAMDMIEANALEIHVNTAQELPMDEGDREFYWLEN-INEIAS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R S G + Sbjct: 184 QLEVPVIVKEVGFGISQKTFKALAKTAVSGINIGGAGGTNFAWIERKR---SKNGFNLDE 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 +G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M + + Sbjct: 241 FGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTGPE 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V IE +++ L G+K ++E Sbjct: 301 KVEEVIEQWKQDLNKLFVLTGSKNIEE 327 >gi|296502168|ref|YP_003663868.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis BMB171] gi|296323220|gb|ADH06148.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis BMB171] Length = 287 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 9/266 (3%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG + IN LA A+ +AMAVGSQ D + S++ +R+ P+ + +N Sbjct: 1 MTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFAN 60 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 61 LGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNS 115 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WG Sbjct: 116 KVPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWG 173 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 I T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + + Sbjct: 174 IQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKL 233 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L + M LG K ++EL Sbjct: 234 VDEIELLHTDLKFIMTALGAKTIEEL 259 >gi|228964573|ref|ZP_04125682.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795107|gb|EEM42604.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar sotto str. T04001] Length = 287 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 9/266 (3%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG + IN LA A++ +AMAVGSQ D + S++ +R+ P+ + +N Sbjct: 1 MTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFAN 60 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 61 LGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNS 115 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WG Sbjct: 116 KVPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENER--RQRMLSYFNNWG 173 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 I T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + + Sbjct: 174 IQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKL 233 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L + M LG K ++EL Sbjct: 234 VDEIELLHTDLKFIMTALGAKTIEEL 259 >gi|218463049|ref|ZP_03503140.1| isopentenyl pyrophosphate isomerase [Rhizobium etli Kim 5] Length = 203 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 117/187 (62%), Gaps = 3/187 (1%) Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L ADGL +HLNPLQE +QP+G+ ++ + +++ + ++ VP++ KEVG GLS+ Sbjct: 3 LEADGLIVHLNPLQEALQPDGDRDWHGVLAQVTRAARSVGVPIVAKEVGSGLSASVACAL 62 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +++G+ D+AG GGTSW+ +E R ++ + + F DWGIPTP SL+ R + Sbjct: 63 VEAGVAVIDVAGAGGTSWAAVEGERARDAAGRAVAMAFADWGIPTPASLQAVRRALPTVK 122 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 IASGG+R+GVD+ K+I LGA + G A+ L A S++AVVA E + ++ V+ F G Sbjct: 123 LIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAATVSTEAVVAHFEVVIRQLAVACFCTG 182 Query: 321 TKRVQEL 327 + + L Sbjct: 183 SPDLATL 189 >gi|320546916|ref|ZP_08041218.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equinus ATCC 9812] gi|320448434|gb|EFW89175.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equinus ATCC 9812] Length = 332 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 14/325 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K FD+ LIH +LP+ E+D F G+ +P I++ Sbjct: 3 NRKDEHIKYALK---YQSPYNSFDEMELIHHSLPDYDLSEIDLHTHFTGRDFDYPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG+ K + +N LA A+ T + M GS + S+ ++ P +L +NL Sbjct: 60 MTGGSEKA-KAVNCKLAQVAQATGLVMVTGSYSAALKNPQD-DSYPSKKDYPDLLLATNL 117 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G + Y+ G+Q + + L +H+N +QE++ P G F + ++ M Sbjct: 118 G-IDKPYELGLQTVDEMQPIF----LQVHVNLMQELLMPEGEREFRSWKKNLENYATKMP 172 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP++LKEVG G+ I++ GI+ FDI+GRGGTS++ IE+ R + +WG Sbjct: 173 VPIVLKEVGFGMDLKTIQMAHAFGIKTFDISGRGGTSFAFIENQRGGDRS---YLNEWGQ 229 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T SL + + + + +ASGG+R+ +D++K +LGA GL+ L+ + VV Sbjct: 230 TTVQSLLNLQDFVDTVEILASGGVRHPLDMVKCFVLGAKGVGLSRTVLELVEKYPVEKVV 289 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + + + + M L K + +L Sbjct: 290 DIVNGWKDDLRLIMCALNCKTITDL 314 >gi|319745285|gb|EFV97603.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae ATCC 13813] Length = 331 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 16/328 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALK---YQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ + M GS A+K+ E Y P T L Sbjct: 58 NAMTGGSEKG-KAVNHKLAQVAQAIGIVMVTGSYSA------ALKNDEDDSY-PTTDLYP 109 Query: 122 NLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +L A + D + A V + L +H+N +QE++ P G F S + Sbjct: 110 DLKLATNIGLDKPIPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVD 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + Sbjct: 170 NIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRS---YLNT 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 227 WGQTTAQSLINAQSMIDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVD 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+A + S +++ + M L K++ +L Sbjct: 287 DVIAILNSWKEDLRMIMCALNCKKITDL 314 >gi|241888621|ref|ZP_04775928.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gemella haemolysans ATCC 10379] gi|241864644|gb|EER69019.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gemella haemolysans ATCC 10379] Length = 316 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D D + + + ++P D+VD S G FP I+++ Sbjct: 2 RKKDHIRLALADK---TKVTSLDSYAIDYNSIPLFGLDDVDTSTSVCGDHWEFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN++ +EK + GS A+K+ E + P Sbjct: 59 TAGGED-CNKINQDFMEVSEKCGIKFFPGSY------SPALKNKEDEEAYPKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +V L D + +A+ A + LH NPLQEI+ P G+ NF + + +SS + Sbjct: 106 SVNLGLDKDPKLVLEAIEKSQAKYIQLHTNPLQEIVMPEGDHNFESWYANLKEVSSKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + I DI+G GGT+++RIE+ R +D + G Sbjct: 166 PVILKETGFGMNEATIKLAIDLNIPAVDISGMGGTNFARIENGR--RTDKSTYLEGIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVA 303 T SLE+A Y ++ IASGG+RN +D++K + LGA G++ FL+ + DA++ Sbjct: 224 TAESLEIAYSYKDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLEILVSKGKDALIQ 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ K + EL Sbjct: 284 EIEKWKKEVKFLMILMNAKTIAEL 307 >gi|317495995|ref|ZP_07954357.1| isopentenyl-diphosphate delta-isomerase [Gemella moribillum M424] gi|316913899|gb|EFV35383.1| isopentenyl-diphosphate delta-isomerase [Gemella moribillum M424] Length = 315 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + +D + D++ + + ++P ++D S G K FP I+++ Sbjct: 2 RKKDHIRLALQDKTTVTS---LDNYAIDYNSIPRFGLADIDTSTTVCGTKWDFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN + ++ T + GS + K++ + Y+ Sbjct: 59 TAGGED-CNKINNDFVEISKITGIEFFPGSYSPALKNEEDAKAYP-KGYS---------- 106 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V L D +A+ A L +H NPLQEI+ P G+ NF + + +S + Sbjct: 107 -VNLGLDKEPSLILKAITDTNARYLQMHTNPLQEIVMPEGDHNFESWFTTLQEVSENSTI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L L + D++G GGT+++RIE+ R + + ++ G Sbjct: 166 PVILKETGFGMNEETIKLALDLKLAAVDVSGMGGTNFARIENGR--RDNKSVYLENIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE PY ++ IASGG+RN +D++K + LGA G++ FL + D DA++A Sbjct: 224 TAESLENVYPYRDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLDILVNDGKDALIA 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ K +QEL Sbjct: 284 EIEKWKKEIKFLMILMNAKTIQEL 307 >gi|308180568|ref|YP_003924696.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046059|gb|ADN98602.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 348 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/326 (32%), Positives = 169/326 (51%), Gaps = 13/326 (3%) Query: 5 RKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+++ K G N FD + H ALPE + +VD + PL I + Sbjct: 9 RKDEHVSLAEKYFHGEQANA--FDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIEA 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISN 122 MTGG+ + E IN L A + +A GSQ V +F +R + P+ ++ N Sbjct: 67 MTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKHPQVAPTFATMRDHNPNGLIFGN 125 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA + A A+ +L AD L LHLN +QEI+ P G+ +F L++ I+ L A+ Sbjct: 126 LGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFHWLTN-ISDLVQAL 179 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+G Sbjct: 180 TVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMAY-LHDFG 238 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 + T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D V Sbjct: 239 LTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDEV 298 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 +A + + + L+G RV + Sbjct: 299 IAMLTDWQSQLKRLFALVGVTRVDQF 324 >gi|257870999|ref|ZP_05650652.1| isopentenyl-diphosphate delta-isomerase [Enterococcus gallinarum EG2] gi|257805163|gb|EEV33985.1| isopentenyl-diphosphate delta-isomerase [Enterococcus gallinarum EG2] Length = 346 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 168/304 (55%), Gaps = 9/304 (2%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD +IH++ PEI +V E G+ + P I++MTGG+ K ++IN++LA A+ Sbjct: 22 FDAVQIIHQSFPEIDSAQVTLETELFGRSFATPFFINAMTGGSEKS-KKINQDLAEVAKA 80 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + MA GS D +F++ RQ P L++N+GA V+ A +A+ + Sbjct: 81 CDLMMATGSVSAALKDPALSDTFQVVRQVNPEGFLLANVGAGS-----SVENALRAIDLF 135 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QE++ P G+ F++ S + + A VP+++KEVG G++ I+ + Sbjct: 136 EADALQIHLNAPQELVMPEGDREFSNWLSLLEQIVKAAPVPVVVKEVGFGMTRETIQQLI 195 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G++ D+AG GGTS+++IE+ R + ++ + +G T +SL A + IAS Sbjct: 196 SVGVQTIDVAGSGGTSFTQIENARRKKREMAYL-NHFGQSTVISLLEANEVQHSFTTIAS 254 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+ DI K++ LGA G+++ L +D + +A I+S +++ + ++G Sbjct: 255 GGIRDAFDIFKALCLGAKSVGISATILTMLLDKGPEETIATIQSWKEQLQLLYTMVGQTL 314 Query: 324 VQEL 327 Q+L Sbjct: 315 TQDL 318 >gi|51892812|ref|YP_075503.1| isopentenyl pyrophosphate isomerase [Symbiobacterium thermophilum IAM 14863] gi|81610520|sp|Q67NT4|IDI2_SYMTH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51856501|dbj|BAD40659.1| Isopentenyl-diphosphate delta-isomerase [Symbiobacterium thermophilum IAM 14863] Length = 363 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 170/305 (55%), Gaps = 9/305 (2%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D HL++ +LPE++ E+D + G +L+ P++I++MTGG + + INR+LA A Sbjct: 34 WEDVHLVNHSLPELALAEIDLTTSVAGVRLAQPVVINAMTGGADD-VTAINRDLAAVAAD 92 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +AMAVGSQ D S+ + R+ P ++++N+G+ D ++A AV ++ Sbjct: 93 LGLAMAVGSQTAGLRDPAVADSYRVVRRVNPKGIVLANVGS-----DATPEQARAAVEMV 147 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QE+ P G+ +F IA + VP+++KE G G+S L Sbjct: 148 EADLLQIHLNAPQELRMPEGDRDFRGRLEAIARMVEEAPVPVVVKECGFGVSRDVAVLLH 207 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 ++G+R D++GRGGT+++ IE R SD Q+WGIPT +L E+A E IA Sbjct: 208 QAGVRAVDVSGRGGTNFAWIEDRRAGLSDPDPGLQNWGIPTACALAEVAALGLPELDLIA 267 Query: 264 SGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 SGG+R+G D K++ LGA +A P L+ + + V+A ++ + +M L G Sbjct: 268 SGGIRHGSDAAKALALGARAAAVAGPVLLRQQREGARGVMAYLQQFLTDLRAAMLLAGAG 327 Query: 323 RVQEL 327 V + Sbjct: 328 SVAAM 332 >gi|66360273|pdb|1VCF|A Chain A, Crystal Structure Of Ipp Isomerase At I422 gi|66360274|pdb|1VCF|B Chain B, Crystal Structure Of Ipp Isomerase At I422 gi|66360277|pdb|1VCG|A Chain A, Crystal Structure Of Ipp Isomerase At P43212 gi|66360278|pdb|1VCG|B Chain B, Crystal Structure Of Ipp Isomerase At P43212 gi|66360279|pdb|1VCG|C Chain C, Crystal Structure Of Ipp Isomerase At P43212 gi|66360280|pdb|1VCG|D Chain D, Crystal Structure Of Ipp Isomerase At P43212 Length = 332 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/327 (34%), Positives = 172/327 (52%), Gaps = 7/327 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I + TGG ERIN LA AAE V +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAXTGGEENG-ERINLALAEAAEALGVGXXLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEXLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + P+ +KEVG GLS + L L+ + D+AG GGTSW+R+E Sbjct: 180 -LPFPVXVKEVGHGLSR-EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELC 237 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 + GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 238 EIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAE 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G + +E Sbjct: 298 RVAAWIGDYLEELRTALFAIGARNPKE 324 >gi|329768013|ref|ZP_08259524.1| isopentenyl-diphosphate delta-isomerase [Gemella haemolysans M341] gi|328838498|gb|EGF88106.1| isopentenyl-diphosphate delta-isomerase [Gemella haemolysans M341] Length = 316 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D D + + + ++P D+VD S G + +P I+++ Sbjct: 2 RKKDHIRLALADK---TKVTSLDSYAIDYNSIPLFGLDDVDTSTSVCGDRWEYPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN++ ++K + GS A+KS E + P Sbjct: 59 TAGGED-CNKINQDFMEVSKKCGINFFPGSY------SPALKSKEDEEAYPKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +V L D Q +A+ A + LH NPLQEI+ P G+ NF + + +SS + Sbjct: 106 SVNLGLDKDPQLVLEAIEKSQAKYIQLHTNPLQEIVMPEGDHNFESWYANLKEVSSKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + I DI+G GGT+++RIE+ R +D + G Sbjct: 166 PVILKETGFGMNEATIKLAIDLNIPAVDISGMGGTNFARIENGR--RTDKSTYLEAIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVA 303 T SLE+A Y ++ IASGG+RN +D++K + LGA G++ FL+ ++ A++ Sbjct: 224 TAESLEIAYSYKDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLEILVNEGKAALIQ 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ + + EL Sbjct: 284 EIEKWKKEVKFLMILMNARNIAEL 307 >gi|15672389|ref|NP_266563.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. lactis Il1403] gi|13878551|sp|Q9CIF5|IDI2_LACLA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|12723281|gb|AAK04505.1|AE006277_5 carotenoid biosynthetic protein [Lactococcus lactis subsp. lactis Il1403] Length = 347 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 171/327 (52%), Gaps = 15/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K ++N+ F D +I +LPE+S +++ S E G+ FP I Sbjct: 11 RKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTKKINFSSEVFGQNFEFPFYI 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 +MTGG + ++IN LA A+ +AMAVGSQ + F E+R+ L Sbjct: 71 EAMTGGTERA-DKINAQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGFLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA ++ A +AV ++ A+ L +H+N QE+ G+ F L + I ++S Sbjct: 130 ANIGA-----GHSLENAKRAVDMIEANALEIHVNTAQELPMDEGDREFYWLEN-INEIAS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R S G + Sbjct: 184 QLEVPVVVKEVGFGISQKTFKALAKTSVSGINIGGAGGTNFAWIERKR---SKNGFNLDE 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 +G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M + + Sbjct: 241 FGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTGPE 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V IE +++ L G+K ++E Sbjct: 301 KVEEVIEQWKQDLNKLFVLTGSKNIEE 327 >gi|42516887|emb|CAD92066.1| isopentenyl diphosphate isomerase type 2 [Halorubrum distributum] Length = 220 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 134/226 (59%), Gaps = 17/226 (7%) Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTVLISN 122 GG+ E INR LA AA +T +AM +GSQR + D ++S+ + R AP + N Sbjct: 1 GGHQNTTE-INRALARAASETGIAMGLGSQRAGLELDDDRVLESYTVVRDAAPDAFIYGN 59 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I +S ++ Sbjct: 60 LGAAQLR-EYDIEMVEQAVKMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIERVSESL 118 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ESDIGI 236 VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + IG Sbjct: 119 SVPIIVKETGNGISRETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQKRIGT 178 Query: 237 VFQDWGIPTPLS-LEMARPY-CNEAQFIASGGLRNGVDILKSIILG 280 +F++WGIPT +S +E A + C IASGG+R G+D+ K+I LG Sbjct: 179 LFREWGIPTAVSTIECAAEHDC----VIASGGVRTGLDVAKAIALG 220 >gi|326405983|gb|ADZ63054.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis CV56] Length = 347 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 171/327 (52%), Gaps = 15/327 (4%) Query: 5 RKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K ++N+ F D +I +LPE+S +++ S E G+ FP I Sbjct: 11 RKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTKKINFSSEVFGQNFEFPFYI 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 +MTGG + ++IN LA A+ +AMAVGSQ + F E+R+ L Sbjct: 71 EAMTGGTERA-DKINAQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGFLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA ++ A +AV ++ A+ L +H+N QE+ G+ F L + I ++S Sbjct: 130 ANIGA-----GHSLENAKRAVDMIEANALEIHVNTAQELPMDEGDREFYWLEN-INEIAS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R S G + Sbjct: 184 QLEVPVVVKEVGFGISQKTFKALAKTSVSGINIGGAGGTNFAWIERKR---SKNGFNLDE 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 +G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M + + Sbjct: 241 FGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTGPE 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V IE +++ L G+K ++E Sbjct: 301 KVEEVIEQWKQDLNKLFVLTGSKNIEE 327 >gi|326771747|ref|ZP_08231032.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces viscosus C505] gi|326637880|gb|EGE38781.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces viscosus C505] Length = 362 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 114/336 (33%), Positives = 175/336 (52%), Gaps = 16/336 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + G DR F DD IH +LP +S ++VD LG + P I++M Sbjct: 13 RKDEHLELAMRLHGQDRAGAF-DDVSFIHHSLPGVSAEQVDIGTTVLGCRWELPFYINAM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN LA AA + VA+A GSQ V D F +R AP +++N+ Sbjct: 72 TGGT-QATAAINAGLAEAAAEAGVAIACGSQHVALRDPERADGFHVIRHRAPGAFVLANV 130 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G Q+A QAV +L A+ L +HLN QE++ P G+ +F S IA + +A+ Sbjct: 131 GPT-----VSPQEALQAVEMLEANALQIHLNAAQELVMPEGDRDFTGWSEAIAGIVAAVP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ + WG Sbjct: 186 VPVVVKEVGFGLSRRTIEALARTGVAAVDVAGAGGTDFIAIENERRPQRDLSYLV-GWGQ 244 Query: 244 PTPL----SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 T L SL + P +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 245 STALCLLESLSGSEPV--SLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 302 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + + + M LLG V +L L+ Sbjct: 303 EALCQELHTWSEHVRTLMTLLGAADVSQLRRTDVLV 338 >gi|270290283|ref|ZP_06196508.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pediococcus acidilactici 7_4] gi|270281064|gb|EFA26897.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pediococcus acidilactici 7_4] Length = 327 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 14/305 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F + L ALPE+ D+V + G + P I +MTGG+ ++NR LA A + Sbjct: 28 FTEIKLRPNALPEMGIDDVSLQTKLAGLPIEVPFFIQAMTGGS-PTTAKLNRRLATIARE 86 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMAVGSQ V +F++ R PH ++++NLGA V A +AV +L Sbjct: 87 TGLAMAVGSQSVALKYPELADTFQVVRNENPHGLILANLGADAS-----VAAAKKAVAML 141 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L LH+N QE++ P G+ +F L +I + +A+ P+++K VG G++ D L L Sbjct: 142 DADVLQLHINVAQELVMPEGDRSFNYLE-QIKAIQAAVSAPVVIKAVGAGMTRAD-ALRL 199 Query: 205 KS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +S G+RY D+ G+GGT++ +IE+ R E D D G+ T SL+ A Sbjct: 200 QSVGVRYIDVGGKGGTNFVQIENARRSEKDFAF-LTDLGLTTVESLKEVNGLG--LSVTA 256 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 +GG+R D++KSI LGA G+A FL + D ++ IE + + M LLG Sbjct: 257 TGGIRTPADVIKSIALGADNVGVAGYFLHQLLHHDDQEIIDLIERWKYQLRCLMVLLGVT 316 Query: 323 RVQEL 327 ++ +L Sbjct: 317 KLADL 321 >gi|300173497|ref|YP_003772663.1| isopentenyl-diphosphate delta-isomerase [Leuconostoc gasicomitatum LMG 18811] gi|299887876|emb|CBL91844.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leuconostoc gasicomitatum LMG 18811] Length = 351 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 164/304 (53%), Gaps = 10/304 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F D + PE+S +V+ S L +P I +MTGG++ + RIN LA A+K Sbjct: 33 FSDIRWLPNTFPEMSVADVNLSTTILNHHFDWPFYIEAMTGGSH-LTGRINGQLAQVAKK 91 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMAVGSQ + + +A+ SF++ RQ P LI+NLGA D + A+ ++ Sbjct: 92 TNLAMAVGSQSIALKESDAVASFKIARQNNPEGFLIANLGA-----DHPIDNVRNAIDMI 146 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ + +H+N QE++ G+ F L + +A + + VP+++KEVG G+S ++ Sbjct: 147 DANAIEMHVNVGQELVMAEGDREFYWLEN-LATIIAKSPVPVIIKEVGFGMSDQAFDIIN 205 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G ++ G GT+++ IE R+ + D + Q +G+ T SL A+ N+ +A+ Sbjct: 206 QLGPAAVNVGGANGTNFAVIERRRNRQPDTFNIDQ-FGLSTVESLLSAQLVDNQVPLVAT 264 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKR 323 GG+++ DI+ S++LGASL A L MD + A++ IE ++ LLG + Sbjct: 265 GGIQSANDIVTSLMLGASLTSSAGFMLATLMDRGETALIQQIEDWQRALPRLFTLLGAQN 324 Query: 324 VQEL 327 V L Sbjct: 325 VASL 328 >gi|296110441|ref|YP_003620822.1| isopentenyl pyrophosphate isomerase [Leuconostoc kimchii IMSNU 11154] gi|295831972|gb|ADG39853.1| isopentenyl pyrophosphate isomerase [Leuconostoc kimchii IMSNU 11154] Length = 351 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 161/299 (53%), Gaps = 10/299 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F+D + PE++ +VD S + +P I +MTGG+N + RIN LA A+K Sbjct: 33 FEDVRWLPETFPEMAVTDVDVSTTLFNHQFKWPFYIEAMTGGSN-LTGRINGQLAEVAKK 91 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMAVGSQ + + NA ++F+L R+ P+ LI+NLGA D ++ A+ ++ Sbjct: 92 TNLAMAVGSQSIALKEPNAAETFKLVRKNHPNGFLIANLGA-----DHPIKNVRSAIDMI 146 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ + +H+N QE++ G+ F L + +A + + VP+++KEVG G+S+ Sbjct: 147 DANAIEMHVNVAQELVMSEGDRKFYWLDN-LATIIAKSPVPVIVKEVGFGMSTTAFNTLK 205 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G ++ G GT+++ IE R+ + D +G+ T SL A+ N+ IA+ Sbjct: 206 ELGPAAINVGGGNGTNFAIIERRRNRQPD-SFNIDHYGLSTVESLLSAKLVHNQIPLIAT 264 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTK 322 GG+++ DI+ S++LGA++ A L+ MD A++ IE + LLG K Sbjct: 265 GGIQSANDIVTSLMLGATMTSSAGFMLETLMDQGQIALIKQIEEWQLALPRLFTLLGAK 323 >gi|218288693|ref|ZP_03492956.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius LAA1] gi|218241051|gb|EED08227.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius LAA1] Length = 362 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 163/292 (55%), Gaps = 13/292 (4%) Query: 5 RKIDHINIV--CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++H++ V DP N F+ L+ + PE+++D+V + + G +L P++I+ Sbjct: 9 RKVEHVHAVQALGDPTGVSNG--FECVSLVPCSAPEVAWDDVSLATQLCGIRLESPIIIN 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG +++ + INR LA A + +AMA+GS + ++ + R+ V+I+ Sbjct: 67 AMTGGADEVYD-INRKLAQVARRFGLAMALGSASAGLASPEVAYTYRVVREIHQDGVVIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G +++A QA+ ++ AD L +H N QE+ G+ +F + + ++ Sbjct: 126 NVG-----MGTRLERARQAIELVRADLLQVHFNAAQELFMAEGDRDFRGALAALEEVARG 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++ KEVG G+S+ D +G+R D+ G GGT++ +E+ R ++I + W Sbjct: 181 VGVPVVAKEVGQGISAEDAVRFADAGVRAIDVGGLGGTNFIAVEAWRR-GAEIDDFWHRW 239 Query: 242 GIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+PT SL E+ A IASGG+R +D+ K++ LGA+ G+A P ++ Sbjct: 240 GLPTAASLCEVKAAVGGRADVIASGGIRTALDVAKAMALGANAVGIAGPLVR 291 >gi|317128563|ref|YP_004094845.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cellulosilyticus DSM 2522] gi|315473511|gb|ADU30114.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cellulosilyticus DSM 2522] Length = 354 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 170/292 (58%), Gaps = 16/292 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF--PLLIS 62 RKI+H++ G R + FDD IH++LP+I+ D++ S++ L +L F P+ I+ Sbjct: 6 RKIEHLDNALL-TGQSR-ESGFDDIRFIHQSLPDINVDDI--SIQSLIGELKFSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG K E IN LA A + +AVGSQ D ++++ R+ + ++ + Sbjct: 62 AMTGGGGKQTEHINGQLANVANVLNIPIAVGSQMSAIKDATEENTYKIVRKNYQNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A AV+++ A+ + +HLN +QE++ P G+ +F + ++I + + Sbjct: 122 NLGS-----EATLEQAKIAVNMIEANAIQIHLNVIQELVMPEGDRHFRNALNRIESICNN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-DIGIVFQD 240 + VP+++KEVG G+S I+ G+ D+ G GGT++S+IE+ R L DI F D Sbjct: 177 IHVPVIVKEVGFGMSRETIDKLYNVGVSVVDVGGFGGTNFSQIENARRLHKYDI---FND 233 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WGIPT S+ A+ +A+GG++ +DI KS+ LGAS G+A LK Sbjct: 234 WGIPTAASIVEAKQARPSVMVLATGGIQTSLDIAKSLALGASAVGMAGQVLK 285 >gi|256851168|ref|ZP_05556557.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 27-2-CHN] gi|260660592|ref|ZP_05861507.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 115-3-CHN] gi|282934634|ref|ZP_06339877.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|297206033|ref|ZP_06923428.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus jensenii JV-V16] gi|256616230|gb|EEU21418.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 27-2-CHN] gi|260548314|gb|EEX24289.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 115-3-CHN] gi|281301209|gb|EFA93510.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|297149159|gb|EFH29457.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus jensenii JV-V16] Length = 340 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/324 (32%), Positives = 162/324 (50%), Gaps = 15/324 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + K I N FD L+ ALPE + E LGKK+ P I++M Sbjct: 7 RKEEHLALAKKYFTIKDND--FDRIELVRPALPESRVSSAAIACEILGKKVKAPFYINAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ K E INR + A+ ++ A GS ++ + + + SF + R+ P + +N+ Sbjct: 65 TGGSEKSKE-INRAIGKASRIGQIPFATGSSSILAKEKDQLASFYVAREENPDGLFFANV 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 N + A V L AD L +H+N +QE+ P G+ +F + K+ + +D Sbjct: 124 -----NPNTPANTAKNIVQELQADALQIHINTVQELAMPEGDRDFVWID-KLKAIRDVVD 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G IEL K+ D+ G GGT++++IE+ R S + G+ Sbjct: 178 VPVIIKEVGFGFDKASIELLQKNNFNLIDLGGAGGTNFAQIENARS--SHPLPYLDELGL 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 T S +A C F ASGG+RN +DILK ++LGA G+A+ FL+ +S D +V Sbjct: 236 STVKSALIAEE-CG-IDFFASGGIRNALDILKCLVLGAKSVGIANLFLQAYENSGEDGLV 293 Query: 303 AAIESLRKEFIVSMFLLGTKRVQE 326 + E L G V E Sbjct: 294 ETVLRFEDELAGLFALFGINNVNE 317 >gi|330718592|ref|ZP_08313192.1| isopentenyl pyrophosphate isomerase [Leuconostoc fallax KCTC 3537] Length = 327 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 12/302 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FDD + ALPE++ +V+ S L + S+P I +MTGG+ K + IN+ LA A + Sbjct: 32 FDDVRWVPNALPELTVQDVNTSTVMLNHRFSWPFYIEAMTGGSQKTTQ-INQQLAEVALE 90 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMAVGSQ + + + +SF++ R+ LI+NLGA + + A+ ++ Sbjct: 91 TDLAMAVGSQSIAIKEPDKRESFKIVRKTHQDGFLIANLGA-----NHNIINVRNAIDMI 145 Query: 145 GADGLFLHLNPLQEII--QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A+ + LHLN QE+ + G+ +F L + IA +++ VP+++KEVG G+S L Sbjct: 146 DANAIELHLNVAQELTMSEHEGDRSFYWLDN-IATIAAKSPVPVIVKEVGFGMSQATFNL 204 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G+ ++ G GT++++IE+ R+ + + + ++G T SL A+ N I Sbjct: 205 LQDTGVAAINVGGANGTNFAKIENRRN-QDKLKLNLDNYGFSTVESLLDAKMSQNTLPLI 263 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGT 321 A+GG++ D++ S++LGA+L A FL + DA+V I ++ + LLG Sbjct: 264 ATGGIQKIQDVITSLMLGATLTSSAGYFLHTLVSKGQDALVHTINEWQQNLPLIYALLGA 323 Query: 322 KR 323 K+ Sbjct: 324 KK 325 >gi|325067065|ref|ZP_08125738.1| isopentenyl pyrophosphate isomerase [Actinomyces oris K20] Length = 362 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 114/335 (34%), Positives = 173/335 (51%), Gaps = 28/335 (8%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + DR F DD IH +LP +S ++VD LG + P I++M Sbjct: 13 RKDEHLELAVHLHRQDRANAF-DDVSFIHHSLPGVSAEQVDIGTTVLGSRWEAPFYINAM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN +LA AA + VA+A GSQ V D F +R+ AP +++N+ Sbjct: 72 TGGT-QATAAINADLAEAAAEAGVAIACGSQHVALHDPERADGFHVIRRRAPGAFVLANV 130 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G Q+A +AV +L AD L +HLN QE++ P G+ +F+ +A + +A+ Sbjct: 131 GPT-----VSPQEAARAVEMLEADALQIHLNAAQELVMPEGDRDFSGWEEAVATIVAAVP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ + WG Sbjct: 186 VPVVVKEVGFGLSRRSIESLARTGVAAVDVAGAGGTDFIAIENERRPQRDLSYLV-GWGQ 244 Query: 244 PTPL----SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 PT L SL + P +ASGG+RN +D+++S+ LGA G + L+ + Sbjct: 245 PTALCLLESLSGSEPVS--LPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 302 Query: 300 AVVAAIESLRKEFIVS-------MFLLGTKRVQEL 327 E+LR+E M LLG V +L Sbjct: 303 ------EALRRELSTWGDHVRTLMTLLGVADVAQL 331 >gi|229552297|ref|ZP_04441022.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus LMS2-1] gi|229314279|gb|EEN80252.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus LMS2-1] Length = 344 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 21/315 (6%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE S +VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPESSLADVDLTPPIPF---GWRWPIYINAMTGGSPQT-GKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + +A+A GSQ V D +F+ LR + P +++N+GA + A +A+ Sbjct: 85 QALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFILANIGAGHDQH-----AAEKAIS 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L AD L +H+N QE+I P G+ +F I +++ VP+++KEVG G D++ Sbjct: 140 MLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAATASVPVVVKEVGNGFIREDLQT 198 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYCNEAQ 260 + GI Y DI GRGGT+++ IE+ R D + QDWG T SL AR P Sbjct: 199 LQQLGIHYVDIGGRGGTNFAVIENARRPHHDFSYL-QDWGQTTVESLLEARGLPLT---- 253 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 +A+GG+R+ +D++K+ LGA G++ L + + A +A + ++ LL Sbjct: 254 ILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYAATLAYFQEFLQQLRQLYALL 313 Query: 320 GTKRVQELYLNTALI 334 G Q L A++ Sbjct: 314 GVTNWQALQTAPAVL 328 >gi|225174806|ref|ZP_03728803.1| isopentenyl-diphosphate delta-isomerase, type 2 [Dethiobacter alkaliphilus AHT 1] gi|225169446|gb|EEG78243.1| isopentenyl-diphosphate delta-isomerase, type 2 [Dethiobacter alkaliphilus AHT 1] Length = 349 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/325 (31%), Positives = 169/325 (52%), Gaps = 12/325 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++H+ + D F D +L+H LPE S +D S G L PL I+++ Sbjct: 6 RKLEHLWHAVRS---DLTSADFCDINLVHNCLPETSLKALDLSTNLAGINLRLPLFINAI 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG E +NR LA+ A++ +A+AVGSQ + K+F + R+ P ++ +N+ Sbjct: 63 TGGVEDA-ECVNRELALTAKECGMALAVGSQMAALENPLYAKTFHVVREVYPDGIIFANI 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA V A +AV ++ AD L +HLN QE++ G+T+F +I + A+D Sbjct: 122 GAYS-----DVDMARRAVDMVRADALQIHLNVPQELMMKEGDTDFRGYRRQIEKIVGAVD 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ + + G+ D+ G+GGT++ IE R + WGI Sbjct: 177 VPVIIKEVGFGVAREQAAIFKELGVAAIDVGGKGGTNFMLIERRR-AHAKTNPDLLKWGI 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 PT +S+ A+ + +ASGGL +G+ K++ LGA+ G+A K + + + +V Sbjct: 236 PTAISILEAKAGAPDTDIVASGGLNSGLLAAKALALGANTVGIAGLAAKMLLAEGREKLV 295 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + + E + M + G + EL Sbjct: 296 LCLNEMINEMKMIMVMTGAHNIAEL 320 >gi|199598406|ref|ZP_03211825.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus HN001] gi|258508495|ref|YP_003171246.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus GG] gi|199590725|gb|EDY98812.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus HN001] gi|257148422|emb|CAR87395.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus GG] gi|259649805|dbj|BAI41967.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus GG] Length = 344 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 21/315 (6%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE S +VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPESSLADVDLTPPIPF---GWRWPIYINAMTGGSPQT-GKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + +A+A GSQ V D +F+ LR + P +++N+GA + A +A+ Sbjct: 85 QALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFILANIGAGHDQH-----AAEKAIS 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L AD L +H+N QE+I P G+ +F I +++ VP+++KEVG G D++ Sbjct: 140 MLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAATASVPVVVKEVGNGFIREDLQT 198 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYCNEAQ 260 + GI Y DI GRGGT+++ IE+ R D + QDWG T SL AR P Sbjct: 199 LQQLGIHYVDIGGRGGTNFAVIENARRPHHDFSYL-QDWGQTTVESLLEARGLPLT---- 253 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 +A+GG+R+ +D++K+ LGA G++ L + + A +A + ++ LL Sbjct: 254 ILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYAATLAYFQEFLQQLRQLYALL 313 Query: 320 GTKRVQELYLNTALI 334 G Q L A++ Sbjct: 314 GVTNWQALQTAPAVL 328 >gi|320532059|ref|ZP_08032945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135726|gb|EFW27788.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 362 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 112/340 (32%), Positives = 174/340 (51%), Gaps = 24/340 (7%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + DR F DD IH +LP +S ++VD LG + P I++M Sbjct: 13 RKDEHLELAVHLHRQDRVNAF-DDVSFIHHSLPGVSAEQVDIGTTVLGSRWEVPFYINAM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN +LA AA + VA+A GSQ V D F +R+ AP +++N+ Sbjct: 72 TGGT-QATAAINADLAEAAAEAGVAIACGSQHVALHDPERADGFHVIRRRAPGAFVLANV 130 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G Q+A +AV +L AD L +HLN QE++ P G+ +F+ +A + +A+ Sbjct: 131 GPT-----VSPQEAARAVEMLEADALQIHLNAAQELVMPEGDRDFSGWEEAVATIVAAVP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ + WG Sbjct: 186 VPVVVKEVGFGLSRRSIESLARTGVAAVDVAGAGGTDFIAIENERRPQRDLSYMV-GWGQ 244 Query: 244 PTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 PT L L + + +ASGG+RN +D+++S+ LGA G + L+ + Sbjct: 245 PTALCLLESVAVDDPVGLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP-- 302 Query: 302 VAAIESLRKEFIVS-------MFLLGTKRVQELYLNTALI 334 E+LR+E M LLG V +L ++ Sbjct: 303 ----EALRRELSTWGDHVRTLMTLLGAADVAQLRRTDVVV 338 >gi|238854638|ref|ZP_04644968.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 269-3] gi|260664419|ref|ZP_05865271.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii SJ-7A-US] gi|282932971|ref|ZP_06338368.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|238832428|gb|EEQ24735.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 269-3] gi|260561484|gb|EEX27456.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii SJ-7A-US] gi|281303006|gb|EFA95211.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] Length = 340 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 15/324 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + K I N FD L+ ALPE + E LGKK+ P I++M Sbjct: 7 RKEEHLALAKKYFAIKEND--FDRIELVRPALPESCVSPATIACEILGKKVKAPFYINAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 TGG+ K E INR + A+ ++ A GS ++ + + + SF R+ P + +N+ Sbjct: 65 TGGSEKSKE-INRAIGKASRIGQIPFATGSSSILAKEKDQLASFYAAREENPDGLFFANV 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 N + A V L AD L +H+N +QE+ P G+ +F L K+ + +D Sbjct: 124 -----NPNTPASIAKNIVKELNADALQIHINTVQELAMPEGDRDFVWLD-KLKAIRDEVD 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G I+L K+ D+ G GGT++++IE+ R S + G+ Sbjct: 178 IPVIIKEVGFGFDKSSIDLLQKNDFHLIDLGGAGGTNFAQIENGR--SSHPLPYLDELGL 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVV 302 T S +A+ + F ASGG+RN +DILK ++LGA G+A+ FL+ + D +V Sbjct: 236 STVKSALIAQD--SGIDFFASGGIRNALDILKCLVLGAKSVGIANLFLQVYENGGEDGLV 293 Query: 303 AAIESLRKEFIVSMFLLGTKRVQE 326 + E L G +V E Sbjct: 294 ETVLRFEDELAGLFALFGINKVNE 317 >gi|258539706|ref|YP_003174205.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus Lc 705] gi|257151382|emb|CAR90354.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus Lc 705] Length = 344 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 165/315 (52%), Gaps = 21/315 (6%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+H+ALPE S +VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHQALPESSLADVDLTPPIPF---GWRWPIYINAMTGGSPQT-GKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + +A+A GSQ V D +F+ LR + P +++N+GA + A +A+ Sbjct: 85 QALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFILANIGAGHDQH-----AAEKAIS 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L AD L +H+N QE+I P G+ +F I +++ VP+++KEVG G D++ Sbjct: 140 MLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAATASVPVVVKEVGNGFIREDLQT 198 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYCNEAQ 260 + GI Y DI GRGGT+++ IE+ R D + QDWG T SL AR P Sbjct: 199 LQQLGIHYVDIGGRGGTNFAVIENARRPHHDFSYL-QDWGQTTVESLLEARGLPLT---- 253 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 +A+GG+R+ +D++K+ LGA G++ L + + A +A + ++ LL Sbjct: 254 ILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYAATLAYFQEFLQQLRQLYALL 313 Query: 320 GTKRVQELYLNTALI 334 G Q L A++ Sbjct: 314 GVTNWQALQTAPAVL 328 >gi|257877198|ref|ZP_05656851.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC20] gi|257811364|gb|EEV40184.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC20] Length = 346 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 178/330 (53%), Gaps = 19/330 (5%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD L+H++ P+I +V + + S P I++ Sbjct: 2 NRKDEHVSLAKAFHKEHSND--FDAVRLVHQSFPQIDVADVSIATTVFDRSFSSPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K + +IN+ LA A+ ++ MA GS D + SF + R+ P L++N Sbjct: 60 MTGGSEKTL-KINQELAEIAQACELMMATGSVSAALKDPSVADSFRIVRKANPDGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V+ A +AV + GAD L +HLN QE++ P G+ F+ S + +++ Sbjct: 119 IGA-----GSPVENAQRAVELFGADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTMASV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S I+ L G++ D+AG GGTS+++IE+ R + ++ + +G Sbjct: 174 AVPVVVKEVGFGMSRETIQQLLAIGVQTIDVAGSGGTSFTQIENARRKKRELAYL-DTFG 232 Query: 243 IPTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS- 297 T +SL E+ +P+ IASGG+R+ DI K++ LGA GL++ L + Sbjct: 233 QSTVISLLEANELQQPFTR----IASGGVRDAYDIFKALCLGADSVGLSATILVLLLSKG 288 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +A ++S +++ + + G ++L Sbjct: 289 KEETIATLQSWKEQLQLLYTMAGQTSTKDL 318 >gi|116491123|ref|YP_810667.1| isopentenyl pyrophosphate isomerase [Oenococcus oeni PSU-1] gi|290890631|ref|ZP_06553702.1| hypothetical protein AWRIB429_1092 [Oenococcus oeni AWRIB429] gi|116091848|gb|ABJ57002.1| Isopentenyl diphosphate isomerase [Oenococcus oeni PSU-1] gi|290479759|gb|EFD88412.1| hypothetical protein AWRIB429_1092 [Oenococcus oeni AWRIB429] Length = 367 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 34/324 (10%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 HL LP ++ +VD SV+ G +P I +MTGG+ + IN+ LA A+K +A Sbjct: 40 HLDRPVLPNVNVTDVDHSVKLFGSHFQWPFYIEAMTGGSFRT-GVINQKLAAIAKKYHLA 98 Query: 90 MAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 MAVGS+ + S+ I+SF + R+ P + +N+GA V+ A +A+ ++ A+ Sbjct: 99 MAVGSESISISEKETIESFSVVREENPDGFIFANIGA-----GHSVEDAKEAIRIVDANA 153 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 L +HLN +QE+ G+ +FA I+ + +DVP++LKEVG G+S + Sbjct: 154 LEIHLNAVQELSMSEGDRSFASWKRNISNIIEQVDVPVVLKEVGFGMSKKSVSDLASLHP 213 Query: 209 RYFDIAGRGGTSWSRIESHRDLES-------------------------DIGIVFQDWGI 243 +IAG GGT + RIE R+ +S I + GI Sbjct: 214 AAINIAGAGGTDFGRIEETRNRQSFWETADQDEQNEQEQEEEFDDPEFQSILTSNTNLGI 273 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 T SL A+ IA+GG+ N +++ S+ LGA + G+A FL S + + Sbjct: 274 ITSDSLRFAKQANTGLPIIANGGITNSLEVFNSLALGAKMAGIAGYFLFQL--SQNKLEK 331 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IES +K+ + + G + +E+ Sbjct: 332 TIESWQKQLPLLYAIYGVTKSEEI 355 >gi|329947851|ref|ZP_08294783.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328523475|gb|EGF50573.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 391 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 16/336 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ + G DR FDD +H ALP D +D S + G P I++M Sbjct: 20 RKDEHLDLAMRLNGTDR-PNAFDDVSFMHHALPGTFTDSIDISTDVCGAHWQAPFYINAM 78 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + IN +LA AA VA+A GS V D F +R+ AP +++N+ Sbjct: 79 TGGT-QATAAINAHLAEAAADAGVAIACGSVHVALHDPERADGFRVIRRRAPGAFVLANV 137 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G Q+A QAV +L A+ L +HLN QE++ P G+ +F S IA +++A+ Sbjct: 138 GPT-----VSPQEAAQAVEMLQANALQIHLNAAQELVMPEGDRDFTGWSETIAAIAAAVP 192 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GLS I+ ++G+ D+AG GGT + IE+ R + D+ + WG Sbjct: 193 VPVVVKEVGFGLSRRTIDALTRTGVAAVDVAGAGGTDFIAIENERRPQRDLSYLV-GWGQ 251 Query: 244 PTPL----SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 PT L SL +A P +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 252 PTALCLLESLAVAEPV--SLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 309 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + + M LLG V L L+ Sbjct: 310 EALRRELHTWSDHVRTLMTLLGAADVSRLRRTDVLV 345 >gi|118586910|ref|ZP_01544343.1| alpha-hydroxy acid dehydrogenase [Oenococcus oeni ATCC BAA-1163] gi|118432637|gb|EAV39370.1| alpha-hydroxy acid dehydrogenase [Oenococcus oeni ATCC BAA-1163] Length = 368 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 35/325 (10%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 HL LP ++ +VD SV+ G +P I +MTGG+ + IN+ LA A+K +A Sbjct: 40 HLDRPVLPNVNVTDVDHSVKLFGNHFQWPFYIEAMTGGSFRT-GVINQKLAAIAKKYHLA 98 Query: 90 MAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 MAVGS+ + S+ IKSF + R+ P + +N+GA V+ A +A+ ++ A+ Sbjct: 99 MAVGSESISISEKETIKSFSVVREENPDGFIFANIGA-----GHSVEDAKEAIRIVDANA 153 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 L +HLN +QE+ G+ +FA I+ + +DVP++LKEVG G+S + Sbjct: 154 LEIHLNAVQELSMSEGDRSFASWKRNISNIIEQVDVPVVLKEVGFGMSKKSVSDLASLHP 213 Query: 209 RYFDIAGRGGTSWSRIESHRDLES-------------------DIGIVFQ-------DWG 242 +IAG GGT + RIE R+ +S FQ + G Sbjct: 214 AAINIAGAGGTDFGRIEETRNRQSFWETADQDEQNEQEQEEEEFDDPEFQSILTSNTNLG 273 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 I T SL A+ IA+GG+ N +++ S+ LGA + G+A FL S + + Sbjct: 274 IITSDSLRFAKQANTGLPIIANGGITNSLEVFNSLALGAKMAGIAGYFLFQL--SQNKLE 331 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 IE+ +K+ + + G +E+ Sbjct: 332 KTIENWQKQLPLLYAIYGVTNSEEI 356 >gi|259047798|ref|ZP_05738199.1| isopentenyl-diphosphate delta-isomerase [Granulicatella adiacens ATCC 49175] gi|259035475|gb|EEW36730.1| isopentenyl-diphosphate delta-isomerase [Granulicatella adiacens ATCC 49175] Length = 354 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 158/305 (51%), Gaps = 12/305 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F + +H + +V + G + P I+++TGG+ + +N+ LAI A + Sbjct: 31 FVETRFVHHPFTTVDVADVSLQTKIAGLTFNVPFFINAITGGS-PLTTALNQRLAILARE 89 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMA GS + + +SF+ +RQ P+ +L +NLGA + + A +AV ++ Sbjct: 90 TGMAMATGSMSIAMKFPESTQSFKVIRQENPNGILFANLGA-----HYNAEAAKRAVDII 144 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ + +H+N QE++ P G+ F++ I + A VP+++KEVG G S I Sbjct: 145 EANAIQIHVNRAQELVMPEGDRVFSNWLKNIEEIVKASAVPVIVKEVGFGFSREAIAQLE 204 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G+ DI+G GGT++++IE+ R E + + +DWG T SL A+ + IAS Sbjct: 205 SIGVSAIDISGTGGTNFAKIENGRRKEDKLDFL-EDWGQTTLTSLMEAQE--SRTPIIAS 261 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG++ +D+ K LGASL GL+ L DS + +++ +++ + L+G Sbjct: 262 GGVKTPMDMAKCFALGASLVGLSGEMLHLVRKDDSLPDAITTVQTWKEQLTTILTLVGAD 321 Query: 323 RVQEL 327 + L Sbjct: 322 SISSL 326 >gi|257867119|ref|ZP_05646772.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC30] gi|257873454|ref|ZP_05653107.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC10] gi|257801175|gb|EEV30105.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC30] gi|257807618|gb|EEV36440.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC10] Length = 346 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 178/330 (53%), Gaps = 19/330 (5%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD L+H++ P+I +V + + S P I++ Sbjct: 2 NRKDEHVSLAKAFHKEHSND--FDAVRLVHQSFPQIDVADVSIATTVFDRSFSSPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K + +IN+ LA A+ + MA GS D + SF + R+ P L++N Sbjct: 60 MTGGSEKTL-KINQELAEIAQACDLMMATGSVSAALKDPSVADSFRIVRKANPDGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA ++ A +AV + GAD L +HLN QE++ P G+ F+ S + +++ Sbjct: 119 IGA-----GSPIENAQRAVELFGADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTMASV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S I+ L G++ D+AG GGTS+++IE+ R + ++ + +G Sbjct: 174 AVPVVVKEVGFGMSRETIQQLLAIGVQTIDVAGSGGTSFTQIENARRKKRELAYL-DTFG 232 Query: 243 IPTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS- 297 T +SL E+ +P+ IASGG+R+ DI K++ LGA+ GL++ L + Sbjct: 233 QSTVISLLEANELQQPFTR----IASGGVRDAYDIFKALCLGANSVGLSATILVLLLSKG 288 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +A ++S +++ + + G ++L Sbjct: 289 KEETIATLQSWKEQLQLLYTMAGQTSTKDL 318 >gi|313123652|ref|YP_004033911.1| isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280215|gb|ADQ60934.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 325 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 168/332 (50%), Gaps = 47/332 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 11 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 70 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAAAKIVKDL 124 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 125 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 183 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----- 259 +G +FDI G GGT++S+IE+ R+ P P++ Y N+ Sbjct: 184 AAGFSWFDIGGAGGTNFSQIENSRN--------------PHPMA------YLNDCGLPTA 223 Query: 260 -----------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 Q I SGG+RN +D+ K + LG G+A+ FL ++ D + I S Sbjct: 224 LAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLDEEIGS 283 Query: 308 LRKE--FIVSMFLLGTKRVQELYLNTALIRHQ 337 ++E ++ +++ G V++ Y +++Q Sbjct: 284 WKEELTYLFALYGQGCLPVKQPYYLDMELKNQ 315 >gi|269122809|ref|YP_003305386.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptobacillus moniliformis DSM 12112] gi|268314135|gb|ACZ00509.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptobacillus moniliformis DSM 12112] Length = 312 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 167/325 (51%), Gaps = 21/325 (6%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DH+ K FD++ L + ++P +++D + +P I+S Sbjct: 2 NRKDDHLKFALDSMS---KKNGFDEYMLEYISIPSFGLNDIDTRTKIGEVVFEYPFFINS 58 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K ++IN++L +EKT + + GS + S+ Q Sbjct: 59 ITGGSEKG-DKINKDLEYVSEKTGIFLFPGSYSPFLNKEEV--SYPKNQ----------- 104 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 V L D V +A+ A L +H+N +QEI+ P G NF S + + S + Sbjct: 105 -GVNLGIDKPVNLHLEAISKTNAKFLQVHVNLIQEIVMPEGERNFETWESNLKDILSTVK 163 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LKE G G+ + G++ DI+G+GGT++++IE+ R + +++ G Sbjct: 164 IPVILKETGFGMGRGSFIKAKELGVKILDISGKGGTNFAQIENRR--RNKEKKYYEEIGY 221 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 T SLE+A+ + ++ + IASGG+R+ +D++K++ LGA G++ FL+ ++ DA++ Sbjct: 222 YTTESLEIAKEFKDDFEIIASGGIRHPLDVVKALALGAKAVGISKTFLEILEVNGRDALI 281 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 I + +++ M L +K ++EL Sbjct: 282 DTINTWKEDIRNIMLLTDSKNIEEL 306 >gi|170016977|ref|YP_001727896.1| L-lactate dehydrogenase (FMN-dependent) [Leuconostoc citreum KM20] gi|169803834|gb|ACA82452.1| L-lactate dehydrogenase (FMN-dependent) [Leuconostoc citreum KM20] Length = 353 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 23/333 (6%) Query: 5 RKIDHINIVCKDPGID--RNKKF------FDDWHLIHRALPEISFDEVDPSVEFLGKKLS 56 RK +H+++ G++ R + F ++D + PE++ + D SV+ Sbjct: 9 RKDEHLSL-----GVNLWRQQNFLTPGASYEDVRWLPVVFPEMAVSDTDVSVDLFNHHFD 63 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAP 115 +P I +MTGG+ ++ RIN LA A T +AMAVGSQ + + + +F++ R+ P Sbjct: 64 WPFYIEAMTGGS-ELTGRINSQLAEVARTTNLAMAVGSQSIALKEPDLASTFKVARKQHP 122 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 LI+NLGA D ++ AV ++ A+ + +H+N QE++ G+ F L + + Sbjct: 123 DGFLIANLGA-----DHPIENVRAAVDMIDANAIEMHVNVAQELVMAEGDREFFWLDN-L 176 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 A + + VP+++KEVG G+S I+ + +I G GT+++ IE R+ +++ Sbjct: 177 ANVIAKSPVPVIIKEVGFGMSQSAIKTIQQLNPAAINIGGANGTNFAIIERRRNRQAET- 235 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + +G+ T SL A+ N+ IA+GG+++ D++ S++LGA+L A LK M Sbjct: 236 LNIDQFGLSTVESLISAQIMQNQYPIIATGGIQSANDVITSLMLGATLVSSAGFMLKTLM 295 Query: 296 DS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D A+V IE + + LLG + QEL Sbjct: 296 DDGQSALVQQIEGWQSALPRLLTLLGAQSNQEL 328 >gi|126362789|gb|ABO10429.1| isopentenyl diphosphate isomerase [Brevundimonas bacteroides] Length = 198 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + ++GAD L +HLNPLQE QP G+ ++ +++ + L +++ P+++KE G G+S+ Sbjct: 1 MEMIGADALIVHLNPLQEACQPEGDRDWWGVAAALEALIRSLNAPVVVKETGAGISAPTA 60 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVFQDWGIPTPLSLEMARPYCN 257 + G D+AG GG +W IE R + + F DWGIPT ++ R C Sbjct: 61 RRLIGMGAAVIDVAGAGGANWGLIEGQRATSPADKAHALAFADWGIPTARAIADVRAACP 120 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 EA I SGG+R+GVD K+I LGA + G A+ L+ A SSDAVV + ++ + F Sbjct: 121 EATLIGSGGIRDGVDAAKAIRLGADIVGQAAGVLEAATRSSDAVVEHFDLAIRQLRTTCF 180 Query: 318 LLGTKRVQEL 327 G+ +Q+L Sbjct: 181 CTGSANLQDL 190 >gi|116514012|ref|YP_812918.1| isopentenyl pyrophosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093327|gb|ABJ58480.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 325 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 47/332 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 11 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 70 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAADKIVKDL 124 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 125 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 183 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----- 259 +G +FDI G GGT++++IE+ R+ P P++ Y N+ Sbjct: 184 AAGFSWFDIGGAGGTNFAQIENSRN--------------PHPMA------YLNDCGLPTA 223 Query: 260 -----------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 Q I SGG+RN +D+ K + LG G+A+ FL ++ D + I Sbjct: 224 LAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLDEEIGR 283 Query: 308 LRKE--FIVSMFLLGTKRVQELYLNTALIRHQ 337 ++E ++ +++ G V++ Y +++Q Sbjct: 284 WKEELAYLFALYGQGCLPVKQSYYLDLELKNQ 315 >gi|325686244|gb|EGD28287.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 341 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 166/307 (54%), Gaps = 15/307 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 27 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 86 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAAAKIVKDL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 141 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G +FDI G GGT++++IE+ R+ + D G+PT L+ +A Q I S Sbjct: 200 AAGFSWFDIGGAGGTNFAQIENSRNPHP--MVYLNDCGLPTALAALLAA--PLTKQLIVS 255 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKE--FIVSMFLLGT 321 GG+RN +D+ K + LG G+A+ FL ++ D + I ++E ++ +++ G Sbjct: 256 GGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLDEEIGRWKEELTYLFALYGQGC 315 Query: 322 KRVQELY 328 V++ Y Sbjct: 316 LPVKQPY 322 >gi|325125701|gb|ADY85031.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 341 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 48/329 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 27 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 86 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAADKIVKDL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 141 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----- 259 +G +FDI G GGT++++IE+ R+ P P++ Y N+ Sbjct: 200 AAGFSWFDIGGAGGTNFAQIENSRN--------------PHPMA------YLNDCGLPTA 239 Query: 260 -----------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 Q I SGG+RN +D+ K + LG G+A+ FL ++ D + I Sbjct: 240 LAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLDEEIGR 299 Query: 308 LRKEFIVSMFLLGTKRV---QELYLNTAL 333 ++E L G + Q YL+ L Sbjct: 300 WKEELAYLFALYGQSCLPVKQSYYLDLEL 328 >gi|300812412|ref|ZP_07092842.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496579|gb|EFK31671.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 341 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 47/323 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 27 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 85 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 86 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAAAKIVKDL 140 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 141 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 199 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----- 259 +G +FDI G GGT++++IE+ R+ P P++ Y N+ Sbjct: 200 AAGFSWFDIGGAGGTNFAQIENSRN--------------PHPMA------YLNDCGLPTA 239 Query: 260 -----------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 Q I SGG+RN +D+ K + LG G+A+ FL ++ D + I Sbjct: 240 LAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLDEEIGR 299 Query: 308 LRKE--FIVSMFLLGTKRVQELY 328 ++E ++ +++ G V++ Y Sbjct: 300 WKEELTYLFALYGQGCLPVKQPY 322 >gi|116494977|ref|YP_806711.1| isopentenyl pyrophosphate isomerase [Lactobacillus casei ATCC 334] gi|122263605|sp|Q038V3|IDI2_LACC3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116105127|gb|ABJ70269.1| Isopentenyl diphosphate isomerase [Lactobacillus casei ATCC 334] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 165/309 (53%), Gaps = 23/309 (7%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE + VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPETTMAAVDLKPDLPF---NWQWPIYINAMTGGSPQ-TGKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + VA+A GSQ V D + +F LR + P+ +++N+GA A AV Sbjct: 85 QALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILANVGAGHH-----ATAAEAAVA 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 +L A+ L +HLN QE++ P G+ +F A++ S IA VP+++KEVG G D Sbjct: 140 MLKANALEIHLNAAQEVVMPEGDRDFMWQANIKSIIA----TSQVPIVVKEVGNGFIRED 195 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ + G+++ D+ GRGGT+++ IE+ R D + QDWG T SL AR Sbjct: 196 LQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFAYL-QDWGQTTVESLLEARGLG--L 252 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 +A+GG+R+ +D++K++ LGA G++ L + + +A +A ++ + L Sbjct: 253 TMLATGGVRSPLDVVKALRLGAHAVGMSGMVLHHLIQTGYEATLAYFQNFLHQLRQLYAL 312 Query: 319 LGTKRVQEL 327 LG QEL Sbjct: 313 LGVTNWQEL 321 >gi|104773996|ref|YP_618976.1| isopentenyl pyrophosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423077|emb|CAI97798.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 325 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 48/329 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 11 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + V L Sbjct: 70 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAADKIVKDL 124 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L +HLN QEI P G+ +F L ++ + A VP+++KEVG GL + ++ Sbjct: 125 QADALQIHLNVAQEIPMPEGDRDFVWLD-RMLEIKEAAGVPVIVKEVGSGLDPVSLQKLQ 183 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----- 259 +G +FDI G GGT++++IE+ R+ P P++ Y N+ Sbjct: 184 AAGFSWFDIGGAGGTNFAQIENSRN--------------PHPMA------YLNDCGLPTA 223 Query: 260 -----------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 Q I SGG+RN +D+ K + LG G+A+ FL ++ D + I Sbjct: 224 LAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLDEEIGR 283 Query: 308 LRKEFIVSMFLLGTKRV---QELYLNTAL 333 ++E L G + Q YL+ L Sbjct: 284 WKEELAYLFALYGQSCLPVKQSYYLDLEL 312 >gi|191638488|ref|YP_001987654.1| isopentenyl pyrophosphate isomerase [Lactobacillus casei BL23] gi|226707318|sp|B3WEJ5|IDI2_LACCB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|190712790|emb|CAQ66796.1| Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (Isopentenyl pyrophosphate isomerase) [Lactobacillus casei BL23] gi|327382523|gb|AEA53999.1| Possible isopentenyl-diphosphate delta-isomerase [Lactobacillus casei LC2W] gi|327385720|gb|AEA57194.1| Possible isopentenyl-diphosphate delta-isomerase [Lactobacillus casei BD-II] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/309 (33%), Positives = 165/309 (53%), Gaps = 23/309 (7%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE + VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPETTMAAVDLKPDLPF---NWQWPIYINAMTGGSPQ-TGKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + VA+A GSQ V D + +F LR + P+ +++N+GA A AV Sbjct: 85 QALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILANVGAGHH-----ATAAEAAVA 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 +L A+ L +HLN QE+I P G+ +F A++ S IA VP+++KEVG G D Sbjct: 140 MLKANALEIHLNAAQEVIMPEGDRDFMWQANIKSIIA----TSQVPIVVKEVGNGFIRED 195 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ + G+++ D+ GRGGT+++ IE+ R D + QDWG T SL AR Sbjct: 196 LQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFAYL-QDWGQTTVESLLEARGLG--L 252 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 +A+GG+R+ +D++K++ LGA G++ L + + +A +A ++ + L Sbjct: 253 AMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEATLAYFQNFLHQLRQLYAL 312 Query: 319 LGTKRVQEL 327 LG QEL Sbjct: 313 LGVTNWQEL 321 >gi|239631423|ref|ZP_04674454.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525888|gb|EEQ64889.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 345 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 165/309 (53%), Gaps = 23/309 (7%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE + VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 30 FDQVRLLHRALPETTMAAVDLKPDLPF---NWQWPIYINAMTGGSPQ-TGKLNAQLGQLA 85 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + VA+A GSQ V D + +F LR + P+ +++N+GA A AV Sbjct: 86 QALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILANVGAGHH-----ATAAEAAVA 140 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 +L A+ L +HLN QE++ P G+ +F A++ S IA VP+++KEVG G D Sbjct: 141 MLKANALEIHLNAAQEVVMPEGDRDFMWQANIKSIIA----TSQVPIVVKEVGNGFIRED 196 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ + G+++ D+ GRGGT+++ IE+ R D + QDWG T SL AR Sbjct: 197 LQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFAYL-QDWGQTTVESLLEARGLG--L 253 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 +A+GG+R+ +D++K++ LGA G++ L + + +A +A ++ + L Sbjct: 254 TMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEATLAYFQNFLHQLRQLYAL 313 Query: 319 LGTKRVQEL 327 LG QEL Sbjct: 314 LGVTNWQEL 322 >gi|227535019|ref|ZP_03965068.1| isopentenyl pyrophosphate isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187334|gb|EEI67401.1| isopentenyl pyrophosphate isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 344 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 163/306 (53%), Gaps = 17/306 (5%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE + VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPETTMAAVDLKPDLPF---NWQWPIYINAMTGGSPQ-TGKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + VA+A GSQ V D + +F LR + P+ +++N+GA A AV Sbjct: 85 QALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILANVGAGHH-----ATAAEAAVA 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L A+ L +HLN QE++ P G+ +F + I + + VP+++KEVG G D++ Sbjct: 140 MLKANALEIHLNAPQEVVMPEGDRDFM-WQANIKSIIATSQVPIVVKEVGNGFIREDLQS 198 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G+++ D+ GRGGT+++ IE+ R D + QDWG T SL AR + Sbjct: 199 LQQLGVQFVDVGGRGGTNFATIENARRSGHDFAYL-QDWGQTTVESLLEARGLG--LTML 255 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 A+GG+R+ +D++K++ LGA G++ L + + +A +A ++ + LLG Sbjct: 256 ATGGVRSPLDVVKALRLGAHAVGMSGMVLHHLIQTGYEATLAYFQNFLHQLRQLYALLGV 315 Query: 322 KRVQEL 327 QEL Sbjct: 316 TNWQEL 321 >gi|301066544|ref|YP_003788567.1| isopentenyl diphosphate isomerase [Lactobacillus casei str. Zhang] gi|300438951|gb|ADK18717.1| Isopentenyl diphosphate isomerase [Lactobacillus casei str. Zhang] Length = 344 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 165/309 (53%), Gaps = 23/309 (7%) Query: 26 FDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L+HRALPE + VD P + F +P+ I++MTGG+ + ++N L A Sbjct: 29 FDQVRLLHRALPETTMAAVDLKPDLPF---NWQWPIYINAMTGGSPQ-TGKLNAQLGQLA 84 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + VA+A GSQ V D + +F LR + P+ +++N+GA A AV Sbjct: 85 QALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILANVGAGHH-----ATAAEAAVA 139 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 +L A+ L +HLN QE++ P G+ +F A++ S IA VP+++KEVG G D Sbjct: 140 MLKANALEIHLNAAQEVVMPEGDRDFMWQANIKSIIA----TSQVPIVVKEVGNGFIRED 195 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ + G+++ D+ GRGGT+++ IE+ R D + QDWG T SL AR Sbjct: 196 LQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFAYL-QDWGQTTVESLLEARGLG--L 252 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 +A+GG+R+ +D++K++ LGA G++ L + + +A +A ++ + L Sbjct: 253 TMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEATLAYFKNFLHQLRQLYAL 312 Query: 319 LGTKRVQEL 327 LG QEL Sbjct: 313 LGVTNWQEL 321 >gi|71397772|ref|XP_802537.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70863746|gb|EAN81091.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 179 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 5/170 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 +V RK DHI+I C ++ K ++ + + + ALPEIS ++D EF+G LSF Sbjct: 12 IVRRRKKDHIDI-CLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSF 70 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL+ISSMTGG IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 71 PLIISSMTGGEEHG-RIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSV 129 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TN Sbjct: 130 PMFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTN 179 >gi|304384903|ref|ZP_07367249.1| isopentenyl-diphosphate delta-isomerase [Pediococcus acidilactici DSM 20284] gi|304329097|gb|EFL96317.1| isopentenyl-diphosphate delta-isomerase [Pediococcus acidilactici DSM 20284] Length = 327 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 14/305 (4%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 F + L ALPE+ D+V + G + P I +MTGG+ ++NR LA A + Sbjct: 28 FTEIKLRPNALPEMGIDDVSLQTKLAGLPIEVPFFIQAMTGGS-PTTAKLNRRLATIARE 86 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 T +AMAVGSQ V +F++ R PH ++++NLGA V A +AV +L Sbjct: 87 TGLAMAVGSQSVALKYPELADTFQVVRNENPHGLILANLGADAS-----VAAAKKAVAML 141 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 AD L LH+N QE++ P G+ +F L +I + +A+ VP+++K VG G++ D L L Sbjct: 142 DADVLQLHINVAQELVMPEGDRSFNYLE-QIKAIQAAVSVPVVVKAVGAGMTRAD-ALRL 199 Query: 205 KS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +S G+RY D+ G+GGT++ +IE+ R E D D G+ T SL+ A Sbjct: 200 QSVGVRYIDVGGKGGTNFVQIENARRSEKDFAF-LTDLGLTTVESLKEVNGLG--LSVTA 256 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 +GG+R D++KSI LGA G+A FL + +D ++ IE + + M LLG Sbjct: 257 TGGIRTPADVIKSIALGADNVGVAGYFLHQLLHHNDQEIIDLIERWKYQLRCLMVLLGVT 316 Query: 323 RVQEL 327 ++ +L Sbjct: 317 KLADL 321 >gi|332686199|ref|YP_004455973.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Melissococcus plutonius ATCC 35311] gi|332370208|dbj|BAK21164.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Melissococcus plutonius ATCC 35311] Length = 268 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 138/240 (57%), Gaps = 8/240 (3%) Query: 90 MAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 +A GS I ++++ R+ P ++ +NLGA +++A +A+ ++ ADG Sbjct: 2 VATGSVNAALKGPKLIDTYQIIRKENPKGIIFTNLGA-----GCSLEQAKRAIDLIQADG 56 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 L +H+N QE++ P G+ +F + I LL+ + +PL++KEVG G+S ++ K G+ Sbjct: 57 LQIHVNLAQELVMPEGDRDFRNWLDSIQLLTEQLAIPLIVKEVGFGMSQETLKKLQKIGV 116 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + DI+G+GGT++ +IE+ R + ++ + DWG T +SL + +E +ASGG+R Sbjct: 117 KAVDISGQGGTNFIQIENARREKKELAFL-NDWGQSTIISLLESTNLHDEMTVLASGGIR 175 Query: 269 NGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +DI+K++ LGAS G+A L + D D + ++ ++E + LLG KR +L Sbjct: 176 HSLDIVKALSLGASSVGIAGTILDSLINDGLDLTIQLVQKWQEELKILYTLLGKKRTADL 235 >gi|326692555|ref|ZP_08229560.1| isopentenyl pyrophosphate isomerase [Leuconostoc argentinum KCTC 3773] Length = 351 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 164/328 (50%), Gaps = 13/328 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K N F D + PE++ E D +P I Sbjct: 9 RKDEHLSLGVKLWRQQENNPIGATFADVRWLPATFPEMAVAEADVHTTLFNHTFDWPFYI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG++ + RIN LA A+KT +AMAVGSQ + + A ++F++ R+ P LI Sbjct: 69 EAMTGGSS-LTGRINGQLASVAQKTGLAMAVGSQSIALKEPEAAQTFKIAREMHPDGFLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D + A++++ A+ + LH+N QE + G+ F L + +A + + Sbjct: 128 ANLGA-----DHPIAHVRDAINMIDANAIELHVNVAQESVMAEGDRAFYWLDN-LATVIA 181 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G+S + + ++ G GT+++ IE R+ ++D Sbjct: 182 KSPVPVIIKEVGFGMSQSAFDTLKQLQPAAINVGGANGTNFAVIERRRNRQAD-NFNIDQ 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +G+ T SL A+ N IA+GG+ + D++ S++LGA++ A L M + Sbjct: 241 FGLSTVESLLSAQLAQNTLPVIATGGIASANDVITSLMLGATMTSSAGYMLNTLMTHGET 300 Query: 301 -VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ I S ++ M LLG + + EL Sbjct: 301 GLIDEIISWQRALPRLMTLLGARHISEL 328 >gi|218515082|ref|ZP_03511922.1| isopentenyl pyrophosphate isomerase [Rhizobium etli 8C-3] Length = 218 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 13/179 (7%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH+++V +DR W I H ALPE+ +++ LGK + P Sbjct: 42 RKDDHLDLV-----LDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAP 96 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHT 117 LLISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP Sbjct: 97 LLISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDI 155 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 L++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A Sbjct: 156 PLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVA 214 >gi|116618483|ref|YP_818854.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097330|gb|ABJ62481.1| isopentenyl-diphosphate delta-isomerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 350 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 10/304 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD + PE S EVD S + +P I +MTGG + + RIN LA A + Sbjct: 33 YDDVRWLPNTFPETSVSEVDVSTKLFEHHFKWPFYIEAMTGG-SALTGRINMELAEVAAE 91 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +AMAVGSQ + + +F + R+ P+ L +NLGA D + A+ ++ Sbjct: 92 SNIAMAVGSQSIALKEPETRDTFTIVRKKNPNGFLFANLGA-----DHPISNVRTAIDMI 146 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ + LH+N QE++ G+ F L + +A + + VP+++KEVG G+S + Sbjct: 147 DANAIELHVNAAQELVMAEGDRKFYWLDN-LAEIIAKSPVPVIIKEVGFGMSQSTFKQIA 205 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++ G GT++S IE R+ S+ + +G+ T SL A+ N IA+ Sbjct: 206 DLNPAAINVGGANGTNFSIIEQRRNRLSE-AVNLDHYGLSTVESLLEAKMAKNNLPLIAT 264 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+++ ++ S++LGASL A L M+ +++ I + + LLG + Sbjct: 265 GGIQSVNHVITSLMLGASLTSSAGFMLTTLMEKGQKSLLEEINAWQVALPRLFTLLGAQN 324 Query: 324 VQEL 327 + EL Sbjct: 325 ITEL 328 >gi|227431890|ref|ZP_03913913.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352357|gb|EEJ42560.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 350 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 10/304 (3%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD + PE+S EVD S + +P I +MTGG + + RIN LA A + Sbjct: 33 YDDVRWLPNTFPEMSVSEVDASTKLFEHHFKWPFYIEAMTGG-SALTGRINMKLAEVAAE 91 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +AMAVGSQ + + +F + R+ P+ L +NLGA D + A+ ++ Sbjct: 92 SNIAMAVGSQSIALKEPETRDTFTIVRKKNPNGFLFANLGA-----DHPISNVRTAIDMI 146 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 A+ + LH+N QE++ G+ F L + +A + + VP+++KEVG G+S + Sbjct: 147 DANAIELHVNAAQELVMAEGDRKFYWLDN-LAEIIAKSPVPVIIKEVGFGMSQSTFKQIA 205 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++ G GT++S IE R+ S+ + ++G+ T SL A+ IA+ Sbjct: 206 DLNPAAINVGGANGTNFSIIEQRRNRLSE-AVNLDNYGLSTVESLLEAKMAKKNLPLIAT 264 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+++ ++ S++LGASL A L M+ +++ I + + LLG + Sbjct: 265 GGIQSVNHVITSLMLGASLTSSAGFMLTTLMEKGQKSLLEEINAWQVALPRLFTLLGAQN 324 Query: 324 VQEL 327 + EL Sbjct: 325 ITEL 328 >gi|71414876|ref|XP_809524.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70873920|gb|EAN87673.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 172 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKK---FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 +V RK DHI+I C ++ K ++ + + + ALPEIS ++D EF+G LSF Sbjct: 12 IVRRRKKDHIDI-CLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSF 70 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL+ISSMTGG IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 71 PLIISSMTGGEEHG-RIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSV 129 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE Sbjct: 130 PMFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQE 170 >gi|319440912|ref|ZP_07990068.1| isopentenyl pyrophosphate isomerase [Corynebacterium variabile DSM 44702] Length = 377 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 108/343 (31%), Positives = 172/343 (50%), Gaps = 27/343 (7%) Query: 5 RKIDHINIV-----CKDPGIDRN---KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS 56 RK +H+ + +D G+ R +DD +H + P SFD V G+ + Sbjct: 12 RKDEHVRLAEELRELRDAGVVRGVSPHGVWDDVRFMHHSFPGGSFDGVSLKTSVCGRDWA 71 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAP 115 P I++MTGG+ K IN +LA AA T VAMA GS D + SF + R+ AP Sbjct: 72 VPFYINAMTGGSEK-TALINADLARAAAATGVAMATGSASPALKDPSLAHSFAVVRENAP 130 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 L +N+ + + V++A AV L AD L +H+NP QE++ P G+ +F+ ++ Sbjct: 131 DAFLFANV-----SPEMTVEQARDAVGFLDADALQVHVNPAQELVMPEGDRDFSGWLDRL 185 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + + +DVP+++KEVG GLS+ + + G+R D++GRGGT++ IE+ R + + Sbjct: 186 SDIVDGVDVPVVVKEVGFGLSARSVAEVVARGVRTIDVSGRGGTNFIDIENRRREKQEY- 244 Query: 236 IVFQDWGIP----------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 WG +P+ L Q +ASGG+ +D+++++ LGAS G Sbjct: 245 TYLSGWGQTAAECLLDLQGSPVMLPRDVSEGEPVQVLASGGVSTPLDVVRALSLGASAVG 304 Query: 286 LASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ FL M D D ++ I + M LLG V EL Sbjct: 305 VSGHFLHVLMTDGLDTLIDEITEWIAQVRTLMTLLGAASVAEL 347 >gi|52548678|gb|AAU82527.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon GZfos18C8] Length = 226 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 4/183 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RKI+H+ I DP FDD HLIH ALPEI DE+D S E GK ++ PLLI+SM Sbjct: 6 RKIEHLQICANDPVEAHVSAGFDDVHLIHCALPEIDKDEIDTSTELFGKVMAAPLLIASM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG+ IN+ LA+AAE + + VGSQR + ++F +R APH + +N+ Sbjct: 66 TGGHPDTYP-INKALALAAEHLGIGIGVGSQRAALENPEQEETFRVVRDCAPHAFVYANI 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNFADLSSKIALLSSAM 182 G VQL ++G+ A+ ++ + + LQE IQP G T I + A+ Sbjct: 125 GVVQLT-EYGIDGVEHAIEMIEXXXISRXIIXFLQEAIQPEGCTQARGSLDAIKDVCDAV 183 Query: 183 DVP 185 VP Sbjct: 184 SVP 186 >gi|71664482|ref|XP_819221.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70884513|gb|EAN97370.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 179 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 6/168 (3%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 TNF L K+ L + VP+++K VG G+ + + G++Y D++G GGTSW+ IE Sbjct: 1 TNFESLLHKLEELLPHIKVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIE 60 Query: 226 S--HRDLESD--IGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIIL 279 H DL D +G +F+D GI T SL+ P ++ + IA GG+R G+DI KS+++ Sbjct: 61 GWRHPDLPDDQNLGYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDIAKSLMM 120 Query: 280 GASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA A PFLK A++S + V I+ +KE IV+MF G ++EL Sbjct: 121 GAECATAALPFLKAALESPERVRGVIQRFKKELIVAMFACGASTIEEL 168 >gi|257878882|ref|ZP_05658535.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium 1,230,933] gi|257813110|gb|EEV41868.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium 1,230,933] Length = 272 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 6/187 (3%) Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 +RQ PH +I+N+GA V++A +A+ + AD L +HLN QE++ P G+ +F Sbjct: 24 MRQEYPHGKIIANIGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFT 78 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I +A+DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R Sbjct: 79 NWKVLIQETQTAIDVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARR 138 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ DWG T SL A + +ASGG+RN DI K++ LGA+ G + Sbjct: 139 SKRELS-YLADWGQSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGT 197 Query: 290 FLKPAMD 296 L M+ Sbjct: 198 VLTHLMN 204 >gi|237784667|ref|YP_002905372.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium kroppenstedtii DSM 44385] gi|237757579|gb|ACR16829.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium kroppenstedtii DSM 44385] Length = 428 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 32/303 (10%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAP 115 P I+ MTGG+ ++ +NR LA A +T +A+A GS + + + + +F LR P Sbjct: 110 LPFYINGMTGGS-ELTAGVNRVLAETAARTGIAVATGSMSIYLREPDTLPTFRILRDRNP 168 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 H + +NL A D A + V L AD L +H+N +QE + P G+ +A I Sbjct: 169 HGTVWANLSA-----DATPDDAARVVDALQADALQIHVNAVQETVMPEGSRGYASWPRNI 223 Query: 176 ALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + +A++ P+++KEVG G++ ++ G+ D++GRGGT+++RIE+ R + Sbjct: 224 EAIVNALEATHTPVIVKEVGFGMTRNTLQQLHDLGVSIADVSGRGGTNFARIENDRRSDR 283 Query: 233 DIGIV--FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 D + F + L A P F ASGG+R D+L+ + LGA G+A F Sbjct: 284 DFSYLTGFGQSAAFSLLDATTADPDTLPTLF-ASGGVRQPYDVLRGLALGADAMGVAGTF 342 Query: 291 LKPAMDS------------SDAVVAAIESLRK------EFIVSMF-LLGTKRVQELYLNT 331 L A+ + + + AA+++L E + +++ ++G +L+ Sbjct: 343 LHTALSTGVGDATRSPQERTQGIDAAVDALTSQINRWAEHLQALYEMVGATSTSDLHNTD 402 Query: 332 ALI 334 ALI Sbjct: 403 ALI 405 >gi|1146216|gb|AAC83963.1| similar to Erwinia herbicola carotenoid biosynthesis cluster; putative [Bacillus subtilis subsp. subtilis str. 168] Length = 212 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++GA+ L +HLN +QEI+ P G+ +F+ +I + S + VP+++KEVG G+S Sbjct: 1 MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGK 60 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G DI G GGT++S+IE+ R + I F WGI T SL R + I Sbjct: 61 LYEAGAAAVDIGGYGGTNFSKIENLRR-QRQISF-FNSWGISTAASLAEIRSEFPASTMI 118 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGT 321 ASGGL++ +D+ K+I LGAS G+A FLK DS + ++ I+ + +E + M +LG Sbjct: 119 ASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGA 178 Query: 322 KRVQEL 327 + + +L Sbjct: 179 RTIADL 184 >gi|309807530|ref|ZP_07701486.1| putative isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 01V1-a] gi|308169231|gb|EFO71293.1| putative isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 01V1-a] Length = 207 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%) Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 Q V L AD L +HLN +QE G+ +F L + I + ++VPL++KEVG GL Sbjct: 1 QIVKELQADALQIHLNAVQEAAMTEGDRDFHWLDN-ILEIQQLVNVPLIIKEVGMGLDPF 59 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 ++ K GI YFD+ G GGT++ IE+ R D + D G+ T SL + Sbjct: 60 SVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDLGLSTVKSLLSNLQEISH 118 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD--AVVAAIESLRKEFIVSM 316 FIASGG+ + ++I KS++LGA G+A+ FL +M + A+++ I+ L+ + I+ M Sbjct: 119 VNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGTALISEIQKLKYQLIILM 178 Query: 317 FLLGTKRVQEL 327 L G ++ ++ Sbjct: 179 ALFGINKLDDV 189 >gi|332666117|ref|YP_004448905.1| Isopentenyl-diphosphate delta-isomerase [Haliscomenobacter hydrossis DSM 1100] gi|332334931|gb|AEE52032.1| Isopentenyl-diphosphate Delta-isomerase [Haliscomenobacter hydrossis DSM 1100] Length = 349 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 134/284 (47%), Gaps = 23/284 (8%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 P FLG PL +SSMTGG M IN NLA A + + M +GS R + + Sbjct: 60 PCFPFLGHTFRAPLWVSSMTGGT-AMARTINHNLARACGEFGMGMGLGSCRALLYSDEVL 118 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ---AVHVLGADGLFLHLNPLQEIIQP 162 F ++ L +NLG QL ++ ++ + L ADGL +H+NPLQE +QP Sbjct: 119 ADFAVKPLMGKQPLFANLGIAQLEQLIARRELYRINMMLEKLEADGLIIHVNPLQEWLQP 178 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G+ I + + +DVPL++KEVG G+ + L+ + D A GGT+++ Sbjct: 179 EGDRFVHPPLQTIETILAQVDVPLIVKEVGQGMGKESLRALLQLPLAAIDFAAGGGTNFA 238 Query: 223 RIESHRDLESDIGI----------VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++E RD E+ I + G L LE+ A IASGG++N +D Sbjct: 239 KLELLRDSEAKQLIYGHLTQVGHSAVEMVGFVNQLLLELGDKVRCPA-VIASGGVQNFLD 297 Query: 273 ---ILKSIILGASLGGLASPFLKPAMDSSDA----VVAAIESLR 309 ++ + L A G AS FLK A ++ V A IE L Sbjct: 298 GYYLVHKLQLPAVYGQ-ASGFLKHAQGDYESLRTYVAAQIEGLE 340 >gi|313619035|gb|EFR90855.1| isopentenyl-diphosphate delta-isomerase [Listeria innocua FSL S4-378] Length = 210 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 114/209 (54%), Gaps = 16/209 (7%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N+ +D LI ++P + ++D + FLG + FP Sbjct: 12 RKDEHVAL-----GVKQNENLAPSSLEDIQLIGTSIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVSP-----EVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 VP+++KEVG G++ ++ + G+ Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGV 209 >gi|301166757|emb|CBW26334.1| putative isopentenyl-diphosphate delta-isomerase [Bacteriovorax marinus SJ] Length = 337 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 16/238 (6%) Query: 2 VNDRKIDHINIVCKDPGIDR---NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 ++DRK HI + D ++ NK F D+ + + P +D S FLGK L P Sbjct: 9 LSDRKYAHIQLA-DDAQLEAGHINKLF--DYEPLFSSHPST----IDLSTSFLGKTLGAP 61 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ-YAPHT 117 L ISSMTGG + IN+NLA A + + MA+GS R + N + F LR Sbjct: 62 LWISSMTGGTGEA-RIINQNLATVAAEFGLGMALGSCRPILKSDNDFEDFNLRPILGAEL 120 Query: 118 VLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 +NLG Q+ + + + L ADGL +H+NPLQE QP G+ FA + Sbjct: 121 PFWANLGIAQIEELIENNELESIKEMLSKLSADGLIIHINPLQEWYQPEGDA-FARAPIE 179 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 A +P+++KEVG G+ ++ L+ I+ ++A GGT++S++E R+ E+ Sbjct: 180 TIKDVIAAQIPVMVKEVGQGMGPRSLKALLELPIKGLELAAFGGTNFSKLEKLRENEA 237 >gi|327405193|ref|YP_004346031.1| Isopentenyl-diphosphate Delta-isomerase [Fluviicola taffensis DSM 16823] gi|327320701|gb|AEA45193.1| Isopentenyl-diphosphate Delta-isomerase [Fluviicola taffensis DSM 16823] Length = 339 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 149/313 (47%), Gaps = 25/313 (7%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ + +F+ + + PE S D S++ K + +P+ ISSM Sbjct: 15 RKQNHLDLAFASQSALSDGRFY--YEPMLEGHPEQS----DMSIQLGEKTMRYPIWISSM 68 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ-YAPHTVLISNL 123 TGG + +N+ LA A K M +GS RV+ D+ F LR + L +N+ Sbjct: 69 TGGTSAA-GPLNKMLAKTANKYGFGMGLGSCRVILEDNTYFDDFNLRPILGDASPLFANV 127 Query: 124 GAVQLN--YDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 G Q+ D G K V L ADGL +H+NPLQE +QP G+ I L + Sbjct: 128 GIAQIERLIDKGQTSKLKALVDKLDADGLIVHVNPLQEWLQPEGDLIQRSPLVTIKQLLN 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD------LESDI 234 +D +++KEVG G + LK I D A GGT++S++E R+ E I Sbjct: 188 EIDTNIIVKEVGQGFGPESMRELLKLPILAIDFAANGGTNFSKLELLRNEPLKAHYEDVI 247 Query: 235 GIVFQDWGIPTPLSLEM----ARPYCNEAQFIASGGLRNGVD--ILKSIILGASLGGLAS 288 + + + L+ + + CN I SGG++N +D L S ++ G A+ Sbjct: 248 ALGHSAYEMVDFLNKSIQELGSERKCNNV--IISGGIKNFLDGYYLTSKANIPAIYGQAA 305 Query: 289 PFLKPAMDSSDAV 301 PFLK A +S +A+ Sbjct: 306 PFLKHANESQEAL 318 >gi|47094522|ref|ZP_00232190.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 4b H7858] gi|47017105|gb|EAL07970.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 4b H7858] Length = 210 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 112/197 (56%), Gaps = 16/197 (8%) Query: 5 RKIDHINIVCKDPGIDRNKKF----FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + G+ +N++ +D LI ++P + ++D + +G + FPL Sbjct: 12 RKDEHVAL-----GVKQNEQLAPSSLEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANISP-----EVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLS 196 VP+++KEVG G++ Sbjct: 181 KLSPVPVVVKEVGFGMT 197 >gi|269928885|ref|YP_003321206.1| Isopentenyl-diphosphate Delta-isomerase [Sphaerobacter thermophilus DSM 20745] gi|269788242|gb|ACZ40384.1| Isopentenyl-diphosphate Delta-isomerase [Sphaerobacter thermophilus DSM 20745] Length = 369 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 141/311 (45%), Gaps = 28/311 (9%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 L+ LPEI+ VD SV FLG+++S P+L+ + ++ E + + LA A+ ++ + Sbjct: 45 LLPNPLPEIALANVDTSVRFLGREISLPVLLLA-----SQPSEELGK-LAALAQSRRLPL 98 Query: 91 AVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAH------QAVHV 143 ++G + +D S + LR AP +L+ + A L Q AH +A H Sbjct: 99 SIGDVSALATDPALPASLQGLRLRAPDAILLGEIPATALVPQPD-QAAHDLDRLAEAPHQ 157 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL-------KEVGCGLS 196 G GL + L+ Q ++ N + IA L + +P+L+ + GL Sbjct: 158 AGLSGLIVRLDFDQAVLAGNSTPDATGALDAIAALIRRLRLPVLVRCASGLARHTARGLV 217 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + L +G A GGT R L + VF WGIPT ++ M R Sbjct: 218 ERGVAGLLVAGTGPIPTAAGGGTPAPEQPQPRSLAT----VFAGWGIPTVAAIRMLR--S 271 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 A I+ G + G+D K+I LGA L L +P + ++ DA+ A +++ E +M Sbjct: 272 VGAPVISDGAVETGLDAAKAIALGADLIAL-TPPVDSSLSGEDALAAWLDTFTAEIRAAM 330 Query: 317 FLLGTKRVQEL 327 FL G R+ L Sbjct: 331 FLAGALRIGGL 341 >gi|308272310|emb|CBX28916.1| hypothetical protein N47_B20620 [uncultured Desulfobacterium sp.] Length = 152 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%) Query: 35 ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS 94 ALP+ F E+D EFLGK LS PLLI+ +TGG + RINRNLA AAE+ +AMAVGS Sbjct: 41 ALPDFLFSEMDLQCEFLGKTLSLPLLIAPLTGGCG-LSRRINRNLAEAAERMGLAMAVGS 99 Query: 95 QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 Q++M + ++ S+ LR AP+ L++N+G V + G +AV + AD L Sbjct: 100 QKLMLDNISSPDSYLLRDIAPNIPLLANVGLVHVKR--GKDYLLKAVESIEADEL 152 >gi|148988143|ref|ZP_01819606.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP6-BS73] gi|147926607|gb|EDK77680.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP6-BS73] Length = 259 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 12/198 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNPTD-DSFSVKFSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSM 198 +P+LL L M Sbjct: 171 --QIPVLLSSRKWALEWM 186 >gi|229000713|ref|ZP_04160228.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] gi|228759048|gb|EEM08079.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] Length = 177 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 2/140 (1%) Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 KEVG G+S + L + G++Y D++GRGGT++ IE+ R + + ++WG +P+S Sbjct: 8 KEVGFGMSKKTLHLLNEIGVQYIDVSGRGGTNFIGIENQRREKKEYD-YLKEWGQTSPIS 66 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 L A+ Y N ASGG+RN +D++K + LGA GLASP L+ + D + I Sbjct: 67 LLEAQEYMNRMTIFASGGIRNPLDVVKCLSLGAKAVGLASPVLRVLQKEGVDYAIQEINR 126 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 + +LG + + EL Sbjct: 127 WHDQIKTICTMLGVRTIDEL 146 >gi|39651869|emb|CAD92862.1| isopentenyl-diphosphate delta-isomerase [Natronorubrum sp. Tenzan-10] Length = 137 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 5/138 (3%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV--MFSDHNAIKSFEL-RQYAPHT 117 + SMTGG+ +INR LA AA++ VAM VGSQR D + ++S+ + R AP Sbjct: 1 LDSMTGGHPNTT-KINRKLAEAAQQMNVAMGVGSQRAGLELDDEDLLESYTVVRDVAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+GA QL ++ V +AV ++ AD + +HLN LQE +QP G+ + + I Sbjct: 60 LLYGNVGAAQL-LEYDVDDVERAVEMIDADAMAIHLNFLQEAVQPEGDVDARGCLAAIEQ 118 Query: 178 LSSAMDVPLLLKEVGCGL 195 ++S + VP+++KE G G+ Sbjct: 119 VASDLSVPVVVKETGNGI 136 >gi|42516879|emb|CAD92062.1| isopentenyl diphosphate isomerase type 2 [Haloferax mediterranei] Length = 136 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 5/138 (3%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV--MFSDHNAIKSFEL-RQYAPHT 117 I SMTGG+ +I+R LA A +T +AM VGSQR D + ++S+ + R AP Sbjct: 1 IDSMTGGHPNTT-KISRALAAGAAETGIAMGVGSQRAGLELDDEDLLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + N+GA QL ++ +AV ++ AD L +HLN LQE +QP G+ N + I Sbjct: 60 FIYGNIGAAQLR-EYETAMVERAVEMIDADALAVHLNFLQEAVQPEGDINAEGCLAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGL 195 +SS + VP+++KE G G+ Sbjct: 119 VSSELSVPIVVKETGNGI 136 >gi|119511128|ref|ZP_01630246.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] gi|119464223|gb|EAW45142.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] Length = 139 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 3/103 (2%) Query: 221 WSRIESHRD---LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 W+ +ES R L+ +G F DWG+PT + R + IASGGLR+G+D+ K+I Sbjct: 18 WAMVESERAENALQRRLGRTFADWGLPTAECITSIRAIAPDVPLIASGGLRHGLDVAKAI 77 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 LGA +GGLA PFL+ A++S A+ ++ L E +F G Sbjct: 78 ALGADIGGLAMPFLQAAVESEAALYDLVQVLIAEITTVLFCTG 120 >gi|42516883|emb|CAD92064.1| isopentenyl diphosphate isomerase type 2 [Natronobacterium sp. SSL6] Length = 107 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 5/108 (4%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFE-LRQYAPHT 117 I SMTGG+ +INR LA AA+KT VAM VGSQR + D I+S+ +R AP Sbjct: 1 IDSMTGGHPNTT-KINRALAEAAQKTNVAMGVGSQRAGLELDDEELIESYAVVRDVAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 L N+GA QL ++ V +AV ++ AD + +HLN LQE IQP G+ Sbjct: 60 FLYGNVGAAQL-LEYDVADVEEAVEMIEADAIAVHLNFLQEAIQPEGD 106 >gi|52548679|gb|AAU82528.1| conserved hypothetical protein [uncultured archaeon GZfos18C8] Length = 109 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F DWGIPT S+ + C IA+GG+R G+DI KSI LGASL G A P + PAM Sbjct: 1 MFWDWGIPTAASV-VECVSCG-LPVIATGGVRTGIDIAKSIALGASLSGTALPLVAPAMK 58 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++DAV+ + S+ E ++MFL G + V +L Sbjct: 59 NADAVIDRLSSMISELEIAMFLCGCRDVADL 89 >gi|42516875|emb|CAD92060.1| isopentenyl diphosphate isomerase type 2 [Haloterrigena turkmenica] Length = 108 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 5/110 (4%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHT 117 I SMTGG+ E INR LA AA +T +AM +GSQR + D+ ++S+ + R AP Sbjct: 1 IDSMTGGHQNTTE-INRALARAAGETGIAMGLGSQRAGLELDDNGVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 + NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + Sbjct: 60 FIYGNLGAAQLR-EYDLETVERAVEMIEADALAVHLNFLQEAVQPEGDVD 108 >gi|42516885|emb|CAD92065.1| isopentenyl diphosphate isomerase type 2 [Natronobacterium gregoryi] Length = 94 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 4/95 (4%) Query: 76 NRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDF 132 NR LA AAE+T VAM VGSQR + D ++S+ + R AP+ L N+GA QL ++ Sbjct: 1 NRTLAEAAERTNVAMGVGSQRAGLELDDEAVLESYTVVRDAAPNAFLYGNVGAAQL-LEY 59 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 GV +AV ++ AD + +HLN LQE +QP G+ + Sbjct: 60 GVDDVEEAVEMIDADAMAIHLNFLQEAVQPEGDVD 94 >gi|59040377|gb|AAW83791.1| putative isopentenyl-diphosphate delta-isomerase [Legionella pneumophila] Length = 150 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 65/127 (51%), Gaps = 6/127 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + FD + L+H ALP++ F ++ K + P +ISSM Sbjct: 11 RKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE---LRQYAPHTVLIS 121 T G++ +E IN L A KTK AM VGSQR +D A +FE LR+ P L S Sbjct: 71 TAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQA--AFEWTPLRRDFPMVSLFS 127 Query: 122 NLGAVQL 128 NLG QL Sbjct: 128 NLGIAQL 134 >gi|309799716|ref|ZP_07693933.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] gi|308116672|gb|EFO54131.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] Length = 149 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 4/122 (3%) Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 GIR D++GRGGTS++ IE+ R + D DWG T +L ++ + ++ + + SGG Sbjct: 13 GIRTVDLSGRGGTSFAYIENRRSGQRD---YLNDWGQSTMQALLNSQDWKDKLELLVSGG 69 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +RN +DI+K ++ GA GL+ L+ + D V++ +ES +++ + M L R++ Sbjct: 70 VRNPLDIIKCLVFGAKSVGLSRTMLELVENYPVDVVISIVESWKEDLRLIMCALNCARIE 129 Query: 326 EL 327 +L Sbjct: 130 DL 131 >gi|218458514|ref|ZP_03498605.1| isopentenyl pyrophosphate isomerase [Rhizobium etli Kim 5] Length = 144 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFP 58 RK DH+++V +DR W I H ALPE+ +++ LGK + P Sbjct: 42 RKDDHLDLV-----LDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPMRAP 96 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 LLISSMTGG + E INR L+ AA+ +AM VGSQRV N+ Sbjct: 97 LLISSMTGGMPR-AEAINRRLSEAAQALGIAMCVGSQRVSLQSRNS 141 >gi|33322379|gb|AAQ06914.1|AF496246_1 UPF0037 protein [Lactobacillus delbrueckii subsp. lactis] Length = 123 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A K Sbjct: 4 FDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEKS-RQINRQLGEIANK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 ++A+A+GS ++ + + ++SF + R+ P +L +N+ Sbjct: 63 QQIALALGSASILTKEEDQLESFYVAREANPDGLLFANV 101 >gi|255950126|ref|XP_002565830.1| Pc22g19270 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592847|emb|CAP99215.1| Pc22g19270 [Penicillium chrysogenum Wisconsin 54-1255] Length = 366 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/340 (24%), Positives = 143/340 (42%), Gaps = 65/340 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 ++ N+ +D + + R L I+ D++D S EFLG K+S P S + + + Sbjct: 44 LNENETAYDRYKIRPRVL--INVDKIDTSAEFLGSKVSLPFGFSPAA---SMKLAHPDGE 98 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 LA + K +A+G +S++ + P+ + + L + +++A Sbjct: 99 LATSRAAAKFGLAMGLSS--YSNYPLEEVAAQGTGNPYVMQMCVLRDRSITLQL-LERAE 155 Query: 139 QAVHVLGADGLFLHLN-PL---------------QEIIQPNGNTNFADLSSK-------- 174 +A G LFL ++ P+ ++ PN ++ AD S + Sbjct: 156 KA----GYKALFLSVDVPVLGKRINEYRNEYTIPDDMSWPNILSHGADHSDRTDYDPSLD 211 Query: 175 ----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L + + LK V + DIEL +K GI I+ GG R L Sbjct: 212 WEETIPWLRQHTSLKIWLKGV---TTPEDIELAIKYGIDGIVISNHGG---------RQL 259 Query: 231 ESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLGGLAS 288 + G+P+ L +L + P IA GG+R G DI K++ LGAS + Sbjct: 260 D----------GMPSTLDALRVCAPVAKGRIPIAVDGGIRRGSDIFKALALGASFCFIGR 309 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PF A + + V AI+ LR+E ++M L G + + E+ Sbjct: 310 IPFWGLAYNGQEGVELAIKILRQELRITMALAGCRTISEI 349 >gi|134058564|emb|CAK96451.1| unnamed protein product [Aspergillus niger] Length = 503 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 28/160 (17%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L D+P+++K + C D L + G++ ++ GG S Sbjct: 325 LTWLRGLTDLPVVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRS-------------- 367 Query: 235 GIVFQDWGIP---TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASP 289 QD P T L + PY E+ Q GG+R G D+LK++ LGA+ GL P Sbjct: 368 ----QDTAQPPLVTLLEIRRYAPYLIESNMQIFIDGGIRRGTDVLKALALGATAVGLGRP 423 Query: 290 FL--KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL A +D AI+ LR+E ++M LG ++ EL Sbjct: 424 FLFSLAAGYGADGTRRAIQILRQEIEMNMVFLGVTKLSEL 463 >gi|294656437|ref|XP_002770264.1| DEHA2D05522p [Debaryomyces hansenii CBS767] gi|199431473|emb|CAR65620.1| DEHA2D05522p [Debaryomyces hansenii] Length = 552 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIV 314 N+ + GG+R DILK+I LGA G+ PFL AM + D VV AI+ L+ E I+ Sbjct: 444 NKLEVYTDGGVRRASDILKAICLGAKGVGIGRPFLY-AMSTYGDDGVVKAIQILKDEMIM 502 Query: 315 SMFLLGT---KRVQELYLNTALI 334 +M LLGT R+ E Y++T I Sbjct: 503 NMRLLGTPTIDRLNENYVDTRTI 525 >gi|317038141|ref|XP_001401652.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 468 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 28/160 (17%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L D+P+++K + C D L + G++ ++ GG S Sbjct: 310 LTWLRGLTDLPVVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRS-------------- 352 Query: 235 GIVFQDWGIP---TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASP 289 QD P T L + PY E+ Q GG+R G D+LK++ LGA+ GL P Sbjct: 353 ----QDTAQPPLVTLLEIRRYAPYLIESNMQIFIDGGIRRGTDVLKALALGATAVGLGRP 408 Query: 290 FL--KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL A +D AI+ LR+E ++M LG ++ EL Sbjct: 409 FLFSLAAGYGADGTRRAIQILRQEIEMNMVFLGVTKLSEL 448 >gi|1155211|gb|AAA85265.1| unknown [Lactococcus lactis subsp. cremoris MG1363] Length = 139 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ G GGT+++ IE R S G D+G T SL A+ N +A+GG+ + Sbjct: 6 NVGGAGGTNFAWIERKR---SKNGFDLDDFGFSTLESLLEAKTAENTKSLVATGGISSAQ 62 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL-GTKRVQE 326 DI KS+ILGA L A LK M + V I K+ + +F+L G+K + E Sbjct: 63 DIFKSLILGADLASSAGFILKNLMQTGPEKVEEILEQWKQDLNKLFVLTGSKNIAE 118 >gi|300362719|ref|ZP_07058894.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus gasseri JV-V03] gi|300353147|gb|EFJ69020.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus gasseri JV-V03] Length = 412 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 235 DVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCD 291 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 292 RPVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 337 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + IE L KE ++ M L G K + ++ Sbjct: 338 QSVIEQLNKELLIDMQLTGCKTIDDI 363 >gi|289423550|ref|ZP_06425351.1| dehydrogenase, FMN-dependent [Peptostreptococcus anaerobius 653-L] gi|289156052|gb|EFD04716.1| dehydrogenase, FMN-dependent [Peptostreptococcus anaerobius 653-L] Length = 339 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 130/327 (39%), Gaps = 62/327 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K D L R + ++ D+VD S+E G+KLS P++ + +TG + M + Sbjct: 47 ENVKAIDKIKLNMRVIHDV--DKVDTSLELFGRKLSLPVMAAPITGTSLNMGGLVTEKEY 104 Query: 81 I------AAEKTKVAMAVGSQRVMFS-------DHNA------IKSFELRQYAPHTVLIS 121 I K +AM + F D+N IK +E Sbjct: 105 IVPVVEGCKNKGTLAMVGDTAIDQFLLDNLEVLDNNGGEGIVFIKPWENDNVIKKIREAE 164 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 +GAV + D + G L LH P++ A +I L + Sbjct: 165 KVGAVAVGVD---------IDACGLVTLSLHGKPVK-----------AKTVDEIKELVQS 204 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P +LK + ++ + E +++G+ ++ GG R++ + +D V +D Sbjct: 205 TELPFILKGI---MTPDEAEKAVEAGVYGIVVSNHGG----RVQDYTPGTAD---VLED- 253 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 +A+ + GG+R GVD+LK I LGA + PF+ + + Sbjct: 254 ---------IAKVVNKRIKVFVDGGIRTGVDVLKMIALGADACLIGRPFVTASFGGEVEG 304 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V I+ L+ E SM L G K ++ + Sbjct: 305 VEMYIDRLKSELEGSMILTGCKNLESI 331 >gi|282850737|ref|ZP_06260112.1| dehydrogenase, FMN-dependent [Lactobacillus gasseri 224-1] gi|282558145|gb|EFB63732.1| dehydrogenase, FMN-dependent [Lactobacillus gasseri 224-1] Length = 412 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 235 DVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCD 291 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 292 HPVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 337 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ L KE ++ M L G K ++++ Sbjct: 338 QSVIDQLNKELLIDMQLTGCKTIEDI 363 >gi|116630404|ref|YP_819557.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus gasseri ATCC 33323] gi|116095986|gb|ABJ61138.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus gasseri ATCC 33323] Length = 417 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 240 DVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCD 296 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 297 HPVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 342 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ L KE ++ M L G K ++++ Sbjct: 343 QSVIDQLNKELLIDMQLTGCKTIEDI 368 >gi|238852756|ref|ZP_04643162.1| L-lactate dehydrogenase [Lactobacillus gasseri 202-4] gi|238834606|gb|EEQ26837.1| L-lactate dehydrogenase [Lactobacillus gasseri 202-4] Length = 349 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 172 DVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCD 228 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 229 HPVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 274 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ L KE ++ M L G K ++++ Sbjct: 275 QSVIDQLNKELLIDMQLTGCKTIEDI 300 >gi|309807495|ref|ZP_07701455.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|308169260|gb|EFO71318.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] Length = 103 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 14/102 (13%) Query: 3 NDRKIDHINIVCK----DPGIDRNKKFFDDWHLIHRALPE--ISFDEVDPSVEFLGKKLS 56 + RK DHI++ K P D F +LI ALPE IS D + F K S Sbjct: 5 SQRKKDHIDLANKYYLPHPDAD-----FSGINLIRPALPESKISSDSIQ--TTFFHKIAS 57 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 P I +MTGG+++ E INR LA A+K +AMA+GS ++ Sbjct: 58 APFFIEAMTGGSDESYE-INRRLAFCAKKENIAMALGSASIL 98 >gi|268320243|ref|YP_003293899.1| lactate oxidase [Lactobacillus johnsonii FI9785] gi|262398618|emb|CAX67632.1| lactate oxidase [Lactobacillus johnsonii FI9785] Length = 412 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C + D L + +G ++ GG + D+ +I + Sbjct: 235 DVPVIVKGVEC---AEDAVLAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCD 291 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 292 HPVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 337 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ L KE ++ M L G K ++++ Sbjct: 338 QSVIDQLNKELLIDMQLTGCKTIEDI 363 >gi|145601725|ref|XP_001403132.1| hypothetical protein MGG_14264 [Magnaporthe oryzae 70-15] gi|145010236|gb|EDJ94892.1| hypothetical protein MGG_14264 [Magnaporthe oryzae 70-15] Length = 509 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 28/169 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA + +P++LK V S+ D L +K G ++ GG S Sbjct: 343 IAWIKEVSGLPVILKGVQ---SAEDARLAVKYGCEGIMLSNHGGRS-------------- 385 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPF 290 D P L L YC E + I GG + G DILK+I LGA+ G+ PF Sbjct: 386 ----LDTSQPAILVLLELHKYCPEVFDHLEVIVDGGFQRGSDILKAICLGATAVGIGRPF 441 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L + + L+ E VSM L G + E + +NTA I H Sbjct: 442 LYSLAYGEEGCAHLCQILKDELEVSMKLCGINSLDEAHPGLVNTADIEH 490 >gi|329668133|gb|AEB94081.1| glycolate oxidase [Lactobacillus johnsonii DPC 6026] Length = 412 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 66/341 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNKMIERINRNL 79 N + F+ + ++ RAL + E++ EFLG KL P++I + G N E I+ Sbjct: 54 NTQAFNHFQIVPRALTGMQDPELN--TEFLGMKLKTPVMICPIACHGIANAEAE-IDTAK 110 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AM+ + + + NA+ +P + + + N+DF + Sbjct: 111 GAKVAGALFAMSTYANKSVQEVQNAVGD------SPRFMQLY----LSKNWDFNKMVIEE 160 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNF----------------ADLSSKIALLSSAM 182 +V G G FL ++ L + N TNF + S + +S+ Sbjct: 161 SVKA-GFSGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWNGGKGEGQSVAQMYASSA 219 Query: 183 ---------------DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 DVP+++K V C +M L + +G ++ GG + Sbjct: 220 QNIGPDDIRRIKEIADVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPAT 276 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ +I + P+ L+ GG+R G + K++ LGA L G+ Sbjct: 277 IDVLPEIAKAVKSCDHRVPIILD--------------GGVRRGSHVFKALALGADLVGIG 322 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL A+ + V + IE L KE ++ M L G K ++++ Sbjct: 323 RPFLYGLALGGAQGVQSVIEQLNKELLIDMQLTGCKTIEDI 363 >gi|253574232|ref|ZP_04851574.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846709|gb|EES74715.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 92 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 44/85 (51%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 R +A I SGGL GVD K++ LGA L G L+PA+ S + + A +E + E Sbjct: 8 RAAVPDAALIGSGGLNTGVDAAKALALGADLAGFGRALLEPAVQSEEQLDALLERVELEL 67 Query: 313 IVSMFLLGTKRVQELYLNTALIRHQ 337 +MF +G + L + L+R + Sbjct: 68 RTAMFGIGAGSIPALRNTSRLVRRE 92 >gi|168179615|ref|ZP_02614279.1| dehydrogenase, FMN-dependent [Clostridium botulinum NCTC 2916] gi|226950550|ref|YP_002805641.1| dehydrogenase [Clostridium botulinum A2 str. Kyoto] gi|182669613|gb|EDT81589.1| dehydrogenase, FMN-dependent [Clostridium botulinum NCTC 2916] gi|226843133|gb|ACO85799.1| dehydrogenase, FMN-dependent [Clostridium botulinum A2 str. Kyoto] Length = 337 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 58/302 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMF 99 D SVE G+K+ P+ + ++G M + E+ ++ +G R M Sbjct: 69 DISVELFGRKMDMPIFAAPVSGTTLNMGGKFT-------EEEYISWVIGGCRDSGIYPMV 121 Query: 100 SDHNAIKSF------ELRQYAPHTVLI-------SNLGAVQLNYDFGVQKAHQAVHVLGA 146 D A+ SF EL+++ ++I + + ++L + G + G Sbjct: 122 GD-TAVDSFLITNLDELKKFNGEGIVIIKPWENDNVISKIKLAEEAGAYAVGMDIDAAGL 180 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L LH P + P +I + + +P +LK + ++ D +L +++ Sbjct: 181 ITLALHGKP----VGPK-------TVEEIKEIVKSTKLPFILKGI---MTVEDAKLAVEA 226 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + D+ +P E+A + +A GG Sbjct: 227 GVDAIVVSNHGGRVLDQTPGVADV------------LP-----EIAEAVKGKVTILADGG 269 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R GVD+LK I LGA + PF+K + + V +E+L+ E +M L G ++ Sbjct: 270 VRTGVDVLKMIALGADAVLIGRPFVKASFGGEREGVKIYVENLKSELKSAMVLTGCNSIK 329 Query: 326 EL 327 ++ Sbjct: 330 DI 331 >gi|117803|sp|P09437|CYB2_HANAN RecName: Full=Cytochrome b2, mitochondrial; AltName: Full=L-lactate dehydrogenase [Cytochrome]; AltName: Full=L-lactate ferricytochrome C oxidoreductase; Short=L-LCR; Flags: Precursor gi|2748|emb|CAA34183.1| L-lactate:cytochrome c oxidoreductase preprotein [Wickerhamomyces anomalus] Length = 573 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA + S +P+++K V D+ L + G++ ++ GG + ++ +++ Sbjct: 394 IAFIKSITKMPIVIKGVQ---RKEDVLLAAEHGLQGVVLSNHGGRQLDYTRAPVEVLAEV 450 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++ G+ + + GG+R G D+LK++ LGA GL PFL A Sbjct: 451 MPILKERGLDQKIDI------------FVDGGVRRGTDVLKALCLGAKGVGLGRPFLY-A 497 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M S V AI+ L+ E ++M LLG +++EL Sbjct: 498 MSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEEL 532 >gi|42519875|ref|NP_965805.1| glycolate oxidase [Lactobacillus johnsonii NCC 533] gi|41584165|gb|AAS09771.1| glycolate oxidase [Lactobacillus johnsonii NCC 533] Length = 412 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 235 DVPVIVKGVECAEDAM---LAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVRSSN 291 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P+ L+ GG+R G + K++ LGA L G+ PFL A+ + V Sbjct: 292 HRVPIILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAQGV 337 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + IE L KE ++ M L G K ++++ Sbjct: 338 QSVIEQLNKELLIDMQLTGCKTIEDI 363 >gi|255933333|ref|XP_002558137.1| Pc12g13290 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582756|emb|CAP80956.1| Pc12g13290 [Penicillium chrysogenum Wisconsin 54-1255] Length = 488 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 21/156 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L D+P+++K + C D L + G++ ++ GG S +S Sbjct: 331 LTWLRQLTDLPVVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRSQDTAQS-------- 379 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 + T L + P+ E+ Q GG+R G D+LK+I LGA+ GL PFL Sbjct: 380 -------PLLTLLEIRKFAPHLIESKMQIFIDGGIRRGTDVLKAIALGATAVGLGRPFLF 432 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V IE LR+E +M LG ++EL Sbjct: 433 SLSGYGEKGVRRMIEILRQEIETNMVFLGASSLEEL 468 >gi|121702355|ref|XP_001269442.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] gi|119397585|gb|EAW08016.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] Length = 495 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L R YC E GG+R G D++K++ LGA G+ P L Sbjct: 371 DTAPPAVHTLMEIRKYCPEVFDKLDVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLG 430 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 D V ++ L E I M LLG +RV+EL ++NT L+ Q Sbjct: 431 AGGVDGVKRTLQILADETITCMRLLGVQRVEELGPHHINTRLVEQQ 476 >gi|317147458|ref|XP_001822143.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 366 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 59/334 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + + R L I+ D++D S E G K++FPL S ++ + + +A Sbjct: 47 NEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKLAHPDGEVAA 101 Query: 82 --AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K V M + S +S+++ P+ + + L L +++A + Sbjct: 102 SRAAAKYNVCMGLSS----YSNYSLEDVAAQGSGNPYAMQMCVLKDRSLTLQL-LERAEK 156 Query: 140 AVHVLGADGLFLHLN-PL--QEIIQPNGNTNFADLSSKIALLSSAMD------------- 183 A G LFL ++ PL + + + N + S +LS +D Sbjct: 157 A----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNRTDYDPSLDW 212 Query: 184 ---VPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +P L K + + D+EL ++ G+ I+ GG + + D + Sbjct: 213 ETTIPWLRKHTKLQIWLKGVYTPEDVELAIQYGVDGVIISNHGGRQLDGVPATLDALREC 272 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKP 293 V Q PL+++ GG+R G DI K++ LGAS + P Sbjct: 273 APVAQG---RIPLAID--------------GGIRRGSDIFKALALGASHCFVGRIPIWGL 315 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + V A++ L +EF ++M L G + V+E+ Sbjct: 316 AWNGQEGVELAVKILLQEFRITMALAGCRSVKEI 349 >gi|325684950|gb|EGD27094.1| lactate 2-monooxygenase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 414 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 73/343 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 60 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 111 Query: 82 AAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A + A+A MF S + E+ AP + L + N+DF + Sbjct: 112 VATQKGAALA----GAMFTSSTYGNKPVEEIAAAAPDAPRMFQL-YLSKNWDFN-KMVFD 165 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNFA-----DLSSKIA------------LLSSA 181 A++ G + L ++ L + N TNFA D ++ SSA Sbjct: 166 AINAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSA 225 Query: 182 MDV--------------PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++ P+++K V C + D+E+ L +G + GG Sbjct: 226 QNIGPDDIKRIKEMSGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGG--------- 273 Query: 228 RDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 R+++ G P + + E+ I GG+R G + K++ LGA L G Sbjct: 274 REID----------GAPATIDVLPEVVEAVNGRCPVIFDGGVRRGSHVFKALALGADLVG 323 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P+L A+ V + I L E + M L G K ++++ Sbjct: 324 IGRPYLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDV 366 >gi|313124611|ref|YP_004034870.1| l-lactate dehydrogenase (fmn-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281174|gb|ADQ61893.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 408 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 73/343 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 54 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 105 Query: 82 AAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A + A+A MF S + E+ AP + L + N+DF + Sbjct: 106 VATQKGAALA----GAMFTSSTYGNKPVEEIAAAAPDAPRMFQL-YLSKNWDFN-KMVFD 159 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNFA-----DLSSKIA------------LLSSA 181 A++ G + L ++ L + N TNFA D ++ SSA Sbjct: 160 AINAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSA 219 Query: 182 MDV--------------PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++ P+++K V C + D+E+ L +G + GG Sbjct: 220 QNIGPDDIKRIKEMSGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGG--------- 267 Query: 228 RDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 R+++ G P + + E+ I GG+R G + K++ LGA L G Sbjct: 268 REID----------GAPATIDVLPEVVEAVNGRCPVIFDGGVRRGSHVFKALALGADLVG 317 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P+L A+ V + I L E + M L G K ++++ Sbjct: 318 IGRPYLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDV 360 >gi|300812281|ref|ZP_07092717.1| dehydrogenase, FMN-dependent [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496701|gb|EFK31787.1| dehydrogenase, FMN-dependent [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 408 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 73/343 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 54 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 105 Query: 82 AAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A + A+A MF S + E+ AP + L + N+DF + Sbjct: 106 VATQKGAALA----GAMFTSSTYGNKPVEEIAAAAPDAPRMFQL-YLSKNWDFN-KMVFD 159 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNFA-----DLSSKIA------------LLSSA 181 A++ G + L ++ L + N TNFA D ++ SSA Sbjct: 160 AINAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSA 219 Query: 182 MDV--------------PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++ P+++K V C + D+E+ L +G + GG Sbjct: 220 QNIGPDDIKRIKEMSGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGG--------- 267 Query: 228 RDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 R+++ G P + + E+ I GG+R G + K++ LGA L G Sbjct: 268 REID----------GAPATIDVLPEVVEAVNGRCPVIFDGGVRRGSHVFKALALGADLVG 317 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P+L A+ V + I L E + M L G K ++++ Sbjct: 318 IGRPYLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDV 360 >gi|255712885|ref|XP_002552725.1| KLTH0C11770p [Lachancea thermotolerans] gi|238934104|emb|CAR22287.1| KLTH0C11770p [Lachancea thermotolerans] Length = 618 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 16/154 (10%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A L + ++P+++K V C D+ + G+ I+ GG + ++ +D Sbjct: 442 VAELKTKTNLPVVIKGVQC---VEDVLKAAEIGVDGVVISNHGGRQLDFSRAPLEVLADT 498 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + ++ + L + FI GG+R G DILK++ LGA GL PFL Sbjct: 499 MPILKEKHLDDKLEV-----------FI-DGGVRRGTDILKALCLGAKGVGLGRPFLYAN 546 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + D V AI L +E SM LLG K ++EL Sbjct: 547 SCYGKDGVEKAISMLAEELQCSMRLLGAKSIKEL 580 >gi|148381070|ref|YP_001255611.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 3502] gi|153932809|ref|YP_001385443.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 19397] gi|148290554|emb|CAL84682.1| putative FMN-dependent dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152928853|gb|ABS34353.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 19397] Length = 337 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 60/325 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + ++ D SVE GKK+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIHDVK--NPDISVELFGKKMDMPVFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQR-----VMFSDHNAIKSF------ELRQYAPHTVLI-------SNL 123 E+ ++ +G R M D A+ SF EL+++ + I + + Sbjct: 101 --EEEYISWVIGGCRDAGIYPMVGD-TAVDSFLITNLDELKKFNGEGIAIIKPWENDNVI 157 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 ++L + G + G L LH P + P +I + + Sbjct: 158 NKIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPK-------TVEEIKEIVKSTK 206 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P +LK + ++ D +L +++G+ ++ GG + D+ + Sbjct: 207 LPFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADV------------L 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 P E+A + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 252 P-----EIAEAVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVK 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 307 IYVENLKSELKSAMVLTGCNSIKDI 331 >gi|254580905|ref|XP_002496438.1| ZYRO0C18524p [Zygosaccharomyces rouxii] gi|238939329|emb|CAR27505.1| ZYRO0C18524p [Zygosaccharomyces rouxii] Length = 554 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 48/319 (15%) Query: 34 RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-NRNLAIAAEKTKVAMAV 92 R L +I EVD S LG K+ P IS G +K+ + RNL IAA V V Sbjct: 224 RILQDIDPSEVDCSTTLLGAKVDAPFYISGFAG--SKLAHPLGERNLQIAAYNANVMEMV 281 Query: 93 GSQ--------------------RVMFSDHNAIKSFE--LRQYAPHTVLISNLGAVQLNY 130 Q + FS + +F+ +R+ + V L Sbjct: 282 PKQNSYGPEEFYSTVPDDQSQWMQYHFSTPEEVLNFDKVVREAESRPSVKGIFFNVDL-A 340 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLK 189 D G ++ V+ AD +++ L I+ N N S K + + S+ ++P+ LK Sbjct: 341 DIGNREKDSRRRVMDAD----NISDLNAIVN-NRMGNHPKFSWKDVEKIVSSTNLPIALK 395 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V G D+ + K G++ ++ GG ++ ++ + + + + + Sbjct: 396 GVQRG---EDVVMAAKKGVKAVVLSNHGGRQLDFSRPPLEVLAEANEMLKKQNMQGDIEI 452 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 + GG+R G DI+K++ LGA GL PFL A + V I L Sbjct: 453 YL------------DGGVRRGSDIVKALCLGAKGVGLGRPFLYAMAGYGEEGVDHLITIL 500 Query: 309 RKEFIVSMFLLGTKRVQEL 327 ++E +M LLG +++EL Sbjct: 501 KEEIKNNMRLLGVTKIEEL 519 >gi|242221233|ref|XP_002476369.1| predicted protein [Postia placenta Mad-698-R] gi|220724374|gb|EED78421.1| predicted protein [Postia placenta Mad-698-R] Length = 476 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA GL PFL +A VV A+ L++E ++ M LLG Sbjct: 396 GGVRRGTDVLKALCLGAKAVGLGRPFLYAQSAYGEAGVVQAVRILQREIVLGMRLLGATS 455 Query: 324 VQEL 327 V EL Sbjct: 456 VSEL 459 >gi|153936151|ref|YP_001388850.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. Hall] gi|152932065|gb|ABS37564.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. Hall] Length = 337 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 60/325 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + ++ D SVE GKK+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIHDVK--NPDISVELFGKKMDMPVFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQR-----VMFSDHNAIKSF------ELRQYAPHTVLI-------SNL 123 E+ ++ +G R M D A+ SF EL+++ + I + + Sbjct: 101 --EEEYISWVIGGCRDAGIYPMVGD-TAVDSFLITNLDELKKFNGEGIAIIKPWENDNVI 157 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 ++L + G + G L LH P + P +I + + Sbjct: 158 NKIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPK-------TVEEIKEIVKSTK 206 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P +LK + ++ D +L +++G+ ++ GG + D+ + Sbjct: 207 LPFILKGI---MTVEDAKLAVEAGVDDIVVSNHGGRVLDQTPGVADV------------L 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 P E+A + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 252 P-----EIAEAVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVK 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 307 IYVENLKSELKSAMVLTGCNSIKDI 331 >gi|170757769|ref|YP_001782755.1| dehydrogenase, FMN-dependent [Clostridium botulinum B1 str. Okra] gi|169122981|gb|ACA46817.1| dehydrogenase, FMN-dependent [Clostridium botulinum B1 str. Okra] Length = 337 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 122/302 (40%), Gaps = 58/302 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMF 99 D SVE G+K+ P+ + ++G M + E+ ++ +G+ R M Sbjct: 69 DISVELFGRKMDMPIFAAPVSGTTLNMGGKFT-------EEEYISWVIGACRDSGIYPMV 121 Query: 100 SDHNAIKSF------ELRQYAPHTVLI-------SNLGAVQLNYDFGVQKAHQAVHVLGA 146 D A+ SF EL+++ + I + + ++L + G + G Sbjct: 122 GD-TAVDSFLITNLDELKKFNGEGIAIIKPWENDNVISKIKLAEEAGAYAVGMDIDAAGL 180 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L LH P + P +I + + +P +LK + ++ D +L +++ Sbjct: 181 ITLALHGKP----VGPK-------TVEEIKEIVKSTKLPFILKGI---MTVEDAKLAVEA 226 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + D+ +P E+A + +A GG Sbjct: 227 GVDAIVVSNHGGRVLDQTPGVADV------------LP-----EIAEAVKGKVTILADGG 269 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R GVD+LK I LGA + PF+ + + V +E+L+ E +M L G ++ Sbjct: 270 VRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKIYVENLKSELKSAMVLTGCNSIK 329 Query: 326 EL 327 ++ Sbjct: 330 DI 331 >gi|115399236|ref|XP_001215207.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192090|gb|EAU33790.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 773 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 31/165 (18%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L ++P+++K + C D L + G++ ++ GG S Sbjct: 312 LRGLTNLPIVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRS----------------- 351 Query: 238 FQDWGIPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 QD L+L R Y + + GG+R G D+LK++ LGA+ GL PFL Sbjct: 352 -QDTAQSPLLTLLEIRRYAPSLLNSSMEIYIDGGIRRGTDVLKAVALGATAVGLGRPFLY 410 Query: 293 --PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTA 332 A V AIE LR+E +M LG ++EL +LNT+ Sbjct: 411 SLAAGYGEQGVRRAIEILRQEIESNMVFLGATSLKELGPHHLNTS 455 >gi|260943424|ref|XP_002616010.1| hypothetical protein CLUG_03251 [Clavispora lusitaniae ATCC 42720] gi|238849659|gb|EEQ39123.1| hypothetical protein CLUG_03251 [Clavispora lusitaniae ATCC 42720] Length = 557 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 6/78 (7%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK+I LGA G+ PFL AM + D V A++ L+ E +++M LLG Sbjct: 458 GGVRRGSDVLKAIALGAKGVGIGRPFLY-AMSTYGDDGVFKAVQVLKDEMVMNMRLLGAP 516 Query: 323 RVQEL---YLNTALIRHQ 337 + L Y++TA + Q Sbjct: 517 SIAHLDDSYVDTADLHRQ 534 >gi|58270656|ref|XP_572484.1| L-mandelate dehydrogenase [Cryptococcus neoformans var. neoformans JEC21] gi|134116081|ref|XP_773312.1| hypothetical protein CNBI3650 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255935|gb|EAL18665.1| hypothetical protein CNBI3650 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228742|gb|AAW45177.1| L-mandelate dehydrogenase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 555 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 21/161 (13%) Query: 170 DLS-SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DLS IA + + VP+++K V S DIEL +K+G I+ GG S + Sbjct: 390 DLSWEDIAFIRKYISVPIIVKGV---QSVEDIELCVKAGAEGVLISNHGGRSCDYAPA-- 444 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 I I+++ L RP N+ + GG+R G D++K++ LGA G+ Sbjct: 445 ----PIDILYE---------LRCHRPELFNQIDVLIDGGVRTGADVVKALALGAKAVGVG 491 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL + V E L++E +M G +V EL Sbjct: 492 RPFLYANGTHGQEGVERVCEILQEEITNTMRNAGATKVSEL 532 >gi|299783379|gb|ADJ41377.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum CECT 5716] Length = 77 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 6/72 (8%) Query: 98 MFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 MF+D A +SF LR+ P L++NLGA DF +K Q ++ + AD L +HLNP Sbjct: 1 MFNDEAAKESFAVLREENPDGFLMANLGA---GADF--KKVRQVINFIDADALEIHLNPA 55 Query: 157 QEIIQPNGNTNF 168 QE+I G+ F Sbjct: 56 QELIMKEGDREF 67 >gi|262369928|ref|ZP_06063255.1| glycolate oxidase [Acinetobacter johnsonii SH046] gi|262314967|gb|EEY96007.1| glycolate oxidase [Acinetobacter johnsonii SH046] Length = 372 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 33/218 (15%) Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP--NGNTNFADL 171 +PHT + + +Q H H+ L LQE P NG A Sbjct: 175 SPHTGIRDRERRAFFHLPENMQHPHTPAHI--------PLPELQEGDHPVFNGLMKIAPT 226 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA + D+P+LLK + +S +D +L ++ GI+ ++ GG R L Sbjct: 227 WDDIAWMVQQTDLPILLKGI---VSPLDAQLAIQHGIQGLIVSNHGG---------RVL- 273 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 D IP +L++ + ++ + GG+R G D+ K+I LGAS + P Sbjct: 274 --------DTCIPPLKALQLIKKAVPHDFPLLYDGGVRRGSDVFKAIALGASAVLVGRPC 325 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A + V ++ L++EF ++M L+GT + ++ Sbjct: 326 IYGLATAGALGVAHVLKILKEEFEITMALMGTATLADI 363 >gi|153940812|ref|YP_001392398.1| dehydrogenase, FMN-dependent [Clostridium botulinum F str. Langeland] gi|168181813|ref|ZP_02616477.1| dehydrogenase, FMN-dependent [Clostridium botulinum Bf] gi|237796576|ref|YP_002864128.1| dehydrogenase, FMN-dependent [Clostridium botulinum Ba4 str. 657] gi|152936708|gb|ABS42206.1| dehydrogenase, FMN-dependent [Clostridium botulinum F str. Langeland] gi|182675150|gb|EDT87111.1| dehydrogenase, FMN-dependent [Clostridium botulinum Bf] gi|229260829|gb|ACQ51862.1| dehydrogenase, FMN-dependent [Clostridium botulinum Ba4 str. 657] gi|322807430|emb|CBZ05004.1| putative glycolate oxidase [Clostridium botulinum H04402 065] Length = 337 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 121/302 (40%), Gaps = 58/302 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMF 99 D SVE G+K+ P+ + ++G M + E+ ++ +G R M Sbjct: 69 DISVELFGRKMDMPIFAAPVSGTTLNMGGKFT-------EEEYISWVIGGCRDSGIYPMV 121 Query: 100 SDHNAIKSF------ELRQYAPHTVLI-------SNLGAVQLNYDFGVQKAHQAVHVLGA 146 D A+ SF EL+++ + I + + ++L + G + G Sbjct: 122 GD-TAVDSFLITNLDELKKFNGEGIAIIKPWENDNVISKIKLAEEAGAYAVGMDIDAAGL 180 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L LH P + P +I + + +P +LK + ++ D +L +++ Sbjct: 181 ITLALHGKP----VGPK-------TVEEIKEIVKSTKLPFILKGI---MTVEDAKLAVEA 226 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + D+ +P E+A + +A GG Sbjct: 227 GVDAIVVSNHGGRVLDQTPGVADV------------LP-----EIAEAVKGKVTILADGG 269 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R GVD+LK I LGA + PF+ + + V +E+L+ E +M L G ++ Sbjct: 270 VRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKIYVENLKSELKSAMVLTGCNSIK 329 Query: 326 EL 327 ++ Sbjct: 330 DI 331 >gi|323445311|gb|EGB01985.1| hypothetical protein AURANDRAFT_35604 [Aureococcus anophagefferens] Length = 179 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 16/150 (10%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A S +P++LK V CG D L K+G+ ++ GG + S + +I Sbjct: 36 VAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGRNMDTARSSIEALPEI 92 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + G+ + L + + GG+R G D++K++ LGA+ G+ P + Sbjct: 93 ISMLTEAGLRSKLEVWL------------DGGIRRGSDVVKALALGANACGIGKPAMYGM 140 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 + + + +E L++E + +M L GT R Sbjct: 141 SCYGAAGITKCVEILKREMVQTMQLCGTPR 170 >gi|260947832|ref|XP_002618213.1| hypothetical protein CLUG_01672 [Clavispora lusitaniae ATCC 42720] gi|238848085|gb|EEQ37549.1| hypothetical protein CLUG_01672 [Clavispora lusitaniae ATCC 42720] Length = 544 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K+I LGA G+ PFL +A VV AI+ L+ E I +M LLG + Sbjct: 444 GGIRRGSDIIKAICLGAKGVGMGRPFLYAMAGYGEAGVVRAIQILKMEMINNMRLLGARN 503 Query: 324 VQEL 327 + EL Sbjct: 504 IAEL 507 >gi|212545306|ref|XP_002152807.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] gi|210065776|gb|EEA19870.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] Length = 497 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P+LLK V C D+ +++G++ ++ GG S ++ +++ Sbjct: 318 IPWFKSITKMPILLKGVQC---VEDVLRAVEAGVQGVVLSNHGGRQLDFAPSAIEILAEV 374 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++ R + N+ + GG+R G DI+K++ LGA+ G+ PFL A Sbjct: 375 MPILRE------------RGWENKIEIFIDGGIRRGTDIIKALCLGATGVGIGRPFLY-A 421 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + + V A + L+ E ++M L+G V +L Sbjct: 422 MSTYGQEGVERAFQLLKDELEMNMRLIGAATVADL 456 >gi|193213880|ref|YP_001995079.1| glutamate synthase (NADPH) [Chloroherpeton thalassium ATCC 35110] gi|193087357|gb|ACF12632.1| Glutamate synthase (NADPH) [Chloroherpeton thalassium ATCC 35110] Length = 499 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 20/143 (13%) Query: 155 PLQEIIQPNGNTNFA---DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRY 210 P Q+II P +T+ DL K+ L +D P+ +K V L D+E+ L + + Sbjct: 278 PFQDIISPANHTDIKSEDDLRKKVNWLREKIDGKPVGIKLVAGNLED-DLEVALYAQPDF 336 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-----FIASG 265 I RGG++ + +D ++GIP P ++ AR E Q I +G Sbjct: 337 ITIDCRGGSTGAAPAHVKD----------NFGIPAPYAVYQARKIFREKQVADTALILTG 386 Query: 266 GLRNGVDILKSIILGASLGGLAS 288 G+R DI K I +GA L + Sbjct: 387 GIRTTADIAKCIAMGADAVALGT 409 >gi|238878264|gb|EEQ41902.1| cytochrome b2, mitochondrial precursor [Candida albicans WO-1] Length = 559 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R DILK++ LGA G+ PFL DA V AI+ L+ E I++M LLG + Sbjct: 458 GGVRRATDILKAVCLGAKGVGIGRPFLYAMSGYGDAGVNKAIQLLKDEMIMNMRLLGVNK 517 Query: 324 VQEL 327 ++EL Sbjct: 518 LEEL 521 >gi|260825500|ref|XP_002607704.1| hypothetical protein BRAFLDRAFT_82849 [Branchiostoma floridae] gi|229293053|gb|EEN63714.1| hypothetical protein BRAFLDRAFT_82849 [Branchiostoma floridae] Length = 358 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 28/178 (15%) Query: 164 GNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N LS K I S +P++LK + ++S D EL ++ G++ ++ GG Sbjct: 199 ANATDESLSWKDIKWFQSVTSMPIVLKGI---MTSEDAELAVQHGVQAVWVSNHGG---- 251 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 R L+S +P + + E+ R + GG+R G D++K++ LG Sbjct: 252 -----RQLDS----------VPAAIEVLPEVVRAVRGRVEVYMDGGVRQGTDVMKALALG 296 Query: 281 ASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A L P A + V ++ L+ E ++M L G K +++ +N +L++HQ Sbjct: 297 ARAVFLGRPPIWGLAHSGEEGVRHVLQILKDELSLAMALSGCKEIKD--INRSLLQHQ 352 >gi|187776961|ref|ZP_02993434.1| hypothetical protein CLOSPO_00505 [Clostridium sporogenes ATCC 15579] gi|187775620|gb|EDU39422.1| hypothetical protein CLOSPO_00505 [Clostridium sporogenes ATCC 15579] Length = 337 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 69/328 (21%), Positives = 128/328 (39%), Gaps = 64/328 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 ID + + LIH A D SVE G+K+ P+ + ++G M + Sbjct: 49 IDSLDSYKLNMRLIHNA------KNPDISVELFGEKMDMPVFAAPVSGTTLNMGGKFT-- 100 Query: 79 LAIAAEKTKVAMAVGSQR-----VMFSDHNAIKSF------ELRQYAPHTVLISN----- 122 E+ ++ +G R M D A+ SF EL+++ + I Sbjct: 101 -----EEEYISWVIGGCRDSGIYPMVGD-TAVDSFLITNLDELKKFNGEGIAIIKPWEND 154 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + ++L + G + G L LH P + P +I + Sbjct: 155 NIISKIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPK-------TVEEIKEIVK 203 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + +P +LK + ++ D +L +++G+ ++ GG + D+ Sbjct: 204 STKLPFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADV---------- 250 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 +P E+A + +A GG+R G+DILK I LGA + PF+ + + Sbjct: 251 --LP-----EIAEAVKGKVTILADGGVRTGIDILKMIALGADAVLIGRPFVTASFGGERE 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E+L+ E +M L G ++++ Sbjct: 304 GVKIYVENLKSELKSAMVLTGCNSIKDI 331 >gi|68467313|ref|XP_722318.1| hypothetical protein CaO19.12467 [Candida albicans SC5314] gi|68467542|ref|XP_722204.1| hypothetical protein CaO19.5000 [Candida albicans SC5314] gi|46444160|gb|EAL03437.1| hypothetical protein CaO19.5000 [Candida albicans SC5314] gi|46444285|gb|EAL03561.1| hypothetical protein CaO19.12467 [Candida albicans SC5314] Length = 560 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R DILK++ LGA G+ PFL DA V AI+ L+ E I++M LLG + Sbjct: 459 GGVRRATDILKAVCLGAKGVGIGRPFLYAMSGYGDAGVNKAIQLLKDEMIMNMRLLGVNK 518 Query: 324 VQEL 327 ++EL Sbjct: 519 LEEL 522 >gi|170759541|ref|YP_001788441.1| dehydrogenase, FMN-dependent [Clostridium botulinum A3 str. Loch Maree] gi|169406530|gb|ACA54941.1| dehydrogenase, FMN-dependent [Clostridium botulinum A3 str. Loch Maree] Length = 337 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 121/302 (40%), Gaps = 58/302 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMF 99 D SVE G+K+ P+ + ++G M + E+ ++ +G R M Sbjct: 69 DISVELFGRKMDMPIFAAPVSGTTLNMGGKFT-------EEEYISWVIGGCRDSGIYPMV 121 Query: 100 SDHNAIKSF------ELRQYAPHTVLI-------SNLGAVQLNYDFGVQKAHQAVHVLGA 146 D A+ SF EL+++ + I + + ++L + G + G Sbjct: 122 GD-TAVDSFLITNLDELKKFNGEGIAIIKPWENDNVISKIKLAEEAGAYVVGMDIDAAGL 180 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L LH P + P +I + + +P +LK + ++ D +L +++ Sbjct: 181 ITLALHGKP----VGPK-------TVEEIKEIVKSTKLPFILKGI---MTVEDAKLAVEA 226 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + D+ +P E+A + +A GG Sbjct: 227 GVDAIVVSNHGGRVLDQTPGVADV------------LP-----EIAEAVKGKVTILADGG 269 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R GVD+LK I LGA + PF+ + + V +E+L+ E +M L G ++ Sbjct: 270 VRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKNYVENLKSELKSAMVLTGCNSIK 329 Query: 326 EL 327 ++ Sbjct: 330 DI 331 >gi|254573152|ref|XP_002493685.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia pastoris GS115] gi|238033484|emb|CAY71506.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia pastoris GS115] gi|328354489|emb|CCA40886.1| L-lactate dehydrogenase (cytochrome) [Pichia pastoris CBS 7435] Length = 574 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G DI+K++ LGA GL PFL + D V AI+ L+ E I++M L Sbjct: 471 EVFVDGGIRRGTDIMKALCLGAKGVGLGRPFLYANSAYGPDGVEKAIDILKNELIMNMRL 530 Query: 319 LGTKRVQEL 327 LG ++ +L Sbjct: 531 LGVTKISDL 539 >gi|241950355|ref|XP_002417900.1| L-lactate dehydrogenase [cytochrome], putative; L-lactate ferricytochrome c oxidoreductase, putative; cytochrome b2, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223641238|emb|CAX45618.1| L-lactate dehydrogenase [cytochrome], putative [Candida dubliniensis CD36] Length = 560 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R D+LK+I LGA G+ PFL DA V AI+ L+ E +++M LLG + Sbjct: 459 GGVRRATDVLKAICLGAKGVGIGRPFLYAMTGYGDAGVNKAIQLLKDEMVMNMRLLGVNK 518 Query: 324 VQEL 327 ++EL Sbjct: 519 LEEL 522 >gi|58270314|ref|XP_572313.1| cytochrome b2, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|57228571|gb|AAW45006.1| cytochrome b2, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 593 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG R G D++K++ LGA G+ PFL + VV AIE +R E +M LLG ++ Sbjct: 505 GGCRRGTDVVKALCLGAKGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKL 564 Query: 325 QEL---YLNT 331 +L LNT Sbjct: 565 DQLGPHLLNT 574 >gi|321264494|ref|XP_003196964.1| cytochrome b2, mitochondrial precursor [Cryptococcus gattii WM276] gi|317463442|gb|ADV25177.1| Cytochrome b2, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 569 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG R G D++K++ LGA G+ PFL + VV AIE +R E +M LLG ++ Sbjct: 481 GGCRRGTDVVKALCLGAKGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKL 540 Query: 325 QEL---YLNT 331 +L LNT Sbjct: 541 DQLGPHLLNT 550 >gi|134117736|ref|XP_772502.1| hypothetical protein CNBL1170 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255116|gb|EAL17855.1| hypothetical protein CNBL1170 [Cryptococcus neoformans var. neoformans B-3501A] Length = 569 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG R G D++K++ LGA G+ PFL + VV AIE +R E +M LLG ++ Sbjct: 481 GGCRRGTDVVKALCLGAKGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKL 540 Query: 325 QEL---YLNT 331 +L LNT Sbjct: 541 DQLGPHLLNT 550 >gi|164663435|ref|XP_001732839.1| hypothetical protein MGL_0614 [Malassezia globosa CBS 7966] gi|159106742|gb|EDP45625.1| hypothetical protein MGL_0614 [Malassezia globosa CBS 7966] Length = 493 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 Q + GG R G DILK+I +GA+ G+ PFL + D VV AI LR E ++M L Sbjct: 391 QILVDGGFRRGTDILKAIAMGATAVGVGRPFLYAYSAYGVDGVVHAINLLRAELEMNMRL 450 Query: 319 LGTKRVQEL 327 +G ++++ Sbjct: 451 IGANTIRDV 459 >gi|242208996|ref|XP_002470347.1| predicted protein [Postia placenta Mad-698-R] gi|220730654|gb|EED84508.1| predicted protein [Postia placenta Mad-698-R] Length = 577 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 28/159 (17%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L S +P+++K + C D E +SG++ ++ GG R+L+ Sbjct: 424 VPWLKSRTKLPIIIKGIQC---VEDAERAFESGVQAIVLSNHGG---------RELDFS- 470 Query: 235 GIVFQDWGIPTPLS----LEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 P P++ L RP + + GG+R G D+LK++ LGA GL P Sbjct: 471 ---------PAPMTVLYELHQRRPDLIQKHEVYIDGGVRRGTDVLKALCLGARGVGLGRP 521 Query: 290 FLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL + + ++ LR+E I M L+G + +L Sbjct: 522 FLYANGVWGEEGCRRVVQILREEIITGMQLMGVTSLDQL 560 >gi|169610864|ref|XP_001798850.1| hypothetical protein SNOG_08540 [Phaeosphaeria nodorum SN15] gi|111062588|gb|EAT83708.1| hypothetical protein SNOG_08540 [Phaeosphaeria nodorum SN15] Length = 498 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 247 LSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 ++L R YC N+ + GGLRNG D+LK++ LGA+ G+ PFL S V Sbjct: 387 MTLCEIRTYCPEVMNKLEIFLDGGLRNGNDVLKALCLGATAVGVGRPFLYALGAYGSKGV 446 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQE 326 ++ L KE M LLG +++ Sbjct: 447 EKCVDVLAKELRTGMRLLGITSLEQ 471 >gi|6323587|ref|NP_013658.1| Cyb2p [Saccharomyces cerevisiae S288c] gi|117804|sp|P00175|CYB2_YEAST RecName: Full=Cytochrome b2, mitochondrial; AltName: Full=L-lactate dehydrogenase [Cytochrome]; AltName: Full=L-lactate ferricytochrome C oxidoreductase; Short=L-LCR; Flags: Precursor gi|3633|emb|CAA26959.1| unnamed protein product [Saccharomyces cerevisiae] gi|577142|emb|CAA86721.1| cytochrome b2 precursor [Saccharomyces cerevisiae] gi|151946111|gb|EDN64342.1| L-lactate cytochrome c oxidoreductase [Saccharomyces cerevisiae YJM789] gi|190408190|gb|EDV11455.1| L-lactate cytochrome c oxidoreductase [Saccharomyces cerevisiae RM11-1a] gi|256273065|gb|EEU08022.1| Cyb2p [Saccharomyces cerevisiae JAY291] gi|259148524|emb|CAY81769.1| Cyb2p [Saccharomyces cerevisiae EC1118] gi|285813949|tpg|DAA09844.1| TPA: Cyb2p [Saccharomyces cerevisiae S288c] gi|323352969|gb|EGA85269.1| Cyb2p [Saccharomyces cerevisiae VL3] Length = 591 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +SM L Sbjct: 485 EVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRL 544 Query: 319 LGTKRVQEL 327 LG + EL Sbjct: 545 LGVTSIAEL 553 >gi|640259|pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia Coli Recombinant Saccharomyces Cerevisiae Flavocytochrome B2- Sulphite Complex gi|640260|pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia Coli Recombinant Saccharomyces Cerevisiae Flavocytochrome B2- Sulphite Complex gi|323347079|gb|EGA81354.1| Cyb2p [Saccharomyces cerevisiae Lalvin QA23] Length = 506 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 397 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 456 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 457 MRLLGVTSIAEL 468 >gi|229909|pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms Resolution gi|229910|pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms Resolution gi|20150736|pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme gi|20150737|pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme Length = 511 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 402 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 461 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 462 MRLLGVTSIAEL 473 >gi|323303647|gb|EGA57435.1| Cyb2p [Saccharomyces cerevisiae FostersB] gi|323336183|gb|EGA77454.1| Cyb2p [Saccharomyces cerevisiae Vin13] Length = 424 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 315 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 374 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 375 MRLLGVTSIAEL 386 >gi|1065320|pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1065321|pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1127122|pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1127123|pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate Length = 511 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 402 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 461 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 462 MRLLGVTSIAEL 473 >gi|5107652|pdb|1QCW|A Chain A, Flavocytochrome B2, Arg289lys Mutant gi|5107653|pdb|1QCW|B Chain B, Flavocytochrome B2, Arg289lys Mutant Length = 410 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 301 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 360 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 361 MRLLGVTSIAEL 372 >gi|158429268|pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q Flavocytochrome B2: Effects Of Mutating The Active Site Base gi|158429269|pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q Flavocytochrome B2: Effects Of Mutating The Active Site Base Length = 511 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 402 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 461 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 462 MRLLGVTSIAEL 473 >gi|51247470|pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound gi|51247471|pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound gi|51247472|pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound gi|51247473|pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound Length = 511 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 402 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 461 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 462 MRLLGVTSIAEL 473 >gi|20150738|pdb|1KBJ|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme gi|20150739|pdb|1KBJ|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme Length = 412 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +SM L Sbjct: 306 EVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRL 365 Query: 319 LGTKRVQEL 327 LG + EL Sbjct: 366 LGVTSIAEL 374 >gi|51247468|pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate gi|51247469|pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate Length = 511 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +SM L Sbjct: 405 EVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRL 464 Query: 319 LGTKRVQEL 327 LG + EL Sbjct: 465 LGVTSIAEL 473 >gi|115433562|ref|XP_001216918.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189770|gb|EAU31470.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 351 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 133/329 (40%), Gaps = 61/329 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + ++ R L ++ D++D S E LG K L + K+ + LA+ Sbjct: 47 NEAAFDRYKILPRTL--VNVDKIDTSTEILGTKSQVALPFGFSPAASQKLAHP-DGELAV 103 Query: 82 --AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K + M + S + A + F VL +QL +Q+A + Sbjct: 104 SRAAAKYGICMGLSSYSNYPLEDVADQGFGNPYAMQMCVLRDRSITIQL-----LQRAEK 158 Query: 140 AVHVLGADGLFLHLN-PL---------------QEIIQPNGNTNFADLSSKIAL---LSS 180 A G LFL ++ P+ +++ PN ++ +D S++ L Sbjct: 159 A----GYKALFLSVDVPVLGKRLNEYRNNYELPKDMSWPNILSSGSDTSNRTDYDPSLDW 214 Query: 181 AMDVPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +P L K + + D+EL ++ G+ I+ GG R L+ Sbjct: 215 ESTIPWLRKHTTLKIWLKGICNPDDVELAIRYGVDGIIISNHGG---------RQLD--- 262 Query: 235 GIVFQDWGIPTPL-SLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLGGLAS-PFL 291 GIP L +L + P +A GG+R G DI K++ LGAS + P Sbjct: 263 -------GIPATLDALRLCAPVAKGRIPLAIDGGIRRGSDIFKALALGASYCFMGRIPIW 315 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 A D + V AI LR+E ++M L G Sbjct: 316 GLAYDGQNGVELAIRILRQELRITMALAG 344 >gi|255728825|ref|XP_002549338.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133654|gb|EER33210.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 584 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 123/326 (37%), Gaps = 60/326 (18%) Query: 37 PEISFD--EVDPSVEFLGKKLSFPLLISSMTGGN------NKMIERINRNLAIAAEKTKV 88 P++ D EVD S LG K+SFP+ I++ G K++ R I + Sbjct: 246 PKVMVDVTEVDISTTMLGTKVSFPVYITATALGKLGHPDGEKVLTRSADKQDIIQMIPTL 305 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A + V + + F+L A + +K Q G G Sbjct: 306 ASCSFDEIVDAATDKQTQWFQLYVNADREI---------------TKKIIQHAEKRGIKG 350 Query: 149 LFLHLNPLQ--------------EIIQPNGNTNFADLSSKIA-LLSSAMDVPLLLKEVGC 193 LF+ ++ Q ++ G+ AD S A +SS +D L K++ Sbjct: 351 LFITVDAPQLGRREKDMKSKSINDLSHVQGDDESADRSQGAARAISSFIDTSLSWKDLEW 410 Query: 194 GLSSMDIELGLKSGIRYFD--IAGRGGTSWSRIESH--RDLESDIGIVFQDWGIPTPLS- 248 S + + LK R D +A G + +H R LE P P+ Sbjct: 411 FKSVTKMPIILKGVQRVDDAVLAAEHGCQGVVLSNHGGRQLEYS----------PPPIEV 460 Query: 249 LEMARPYCNEA------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-V 301 L P E + GG+R D+LK+I LGA G+ PFL DA V Sbjct: 461 LAELMPVLREKGLADNFEVYVDGGIRRATDVLKAICLGAKGVGIGRPFLYAMSTYGDAGV 520 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E I+ M LLG + +L Sbjct: 521 TKAIQLLKDEMIMDMRLLGVTSLDQL 546 >gi|322706109|gb|EFY97691.1| mitochondrial cytochrome b2-like protein [Metarhizium anisopliae ARSEF 23] Length = 483 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + + GG R G DI+K+I LGAS G+ PFL + V A+ LR E +M L Sbjct: 383 EVLVDGGFRRGSDIVKAICLGASAVGVGRPFLYAVNYGTAGVEHAVALLRDEIETAMRLC 442 Query: 320 GTKRVQEL----YLNTALIRH 336 G + E +LNTA + H Sbjct: 443 GMTDLMEEAGPDFLNTAPVDH 463 >gi|238487638|ref|XP_002375057.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220699936|gb|EED56275.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 468 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 7/95 (7%) Query: 245 TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDA 300 T L + P+ E+ Q GG+R G D+LK+I LGA+ GL P L A Sbjct: 362 TLLEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALGATAVGLGRPTLYSLAAGYGEQG 421 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTA 332 V A+E LR+E +M LG ++EL LNTA Sbjct: 422 VRRAVEILRQEIESNMVFLGVTNLKELGPHLLNTA 456 >gi|317143442|ref|XP_001819479.2| cytochrome b2 [Aspergillus oryzae RIB40] Length = 468 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 7/95 (7%) Query: 245 TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDA 300 T L + P+ E+ Q GG+R G D+LK+I LGA+ GL P L A Sbjct: 362 TLLEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALGATAVGLGRPTLYSLAAGYGEQG 421 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTA 332 V A+E LR+E +M LG ++EL LNTA Sbjct: 422 VRRAVEILRQEIESNMVFLGVTNLKELGPHLLNTA 456 >gi|46121901|ref|XP_385504.1| hypothetical protein FG05328.1 [Gibberella zeae PH-1] Length = 502 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVS 315 N+ + GG+R G DILK++ LGA G+ PFL +A V+ A++ L+ E ++ Sbjct: 382 NKIEIFIDGGIRRGTDILKALCLGARGVGIGRPFLYAMSTYGEAGVIRAMQLLKDELEMN 441 Query: 316 MFLLGTKRVQELY 328 M L+G ++++L+ Sbjct: 442 MRLIGASKIEDLH 454 >gi|323453515|gb|EGB09386.1| hypothetical protein AURANDRAFT_24176 [Aureococcus anophagefferens] Length = 484 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 16/150 (10%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A S +P++LK V CG D L K+G+ ++ GG + S + +I Sbjct: 336 VAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGRNMDTARSSIEALPEI 392 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + G+ + L + + GG+R G D++K++ LGA+ G+ P + Sbjct: 393 ISMLTEAGLRSKLEVWL------------DGGIRRGSDVVKALALGANACGIGKPAMYGM 440 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 + + + +E L++E + +M L G R Sbjct: 441 SCYGAAGITKCVEILKREMVQTMQLCGAPR 470 >gi|207342528|gb|EDZ70269.1| YML054Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 362 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + GG+R G D+LK++ LGA GL PFL + + V AIE LR E +S Sbjct: 253 DKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMS 312 Query: 316 MFLLGTKRVQEL 327 M LLG + EL Sbjct: 313 MRLLGVTSIAEL 324 >gi|83767338|dbj|BAE57477.1| unnamed protein product [Aspergillus oryzae] Length = 573 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 9/93 (9%) Query: 249 LEMAR--PYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVV 302 LE+ R P+ E+ Q GG+R G D+LK+I LGA+ GL P L A V Sbjct: 453 LEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALGATAVGLGRPTLYSLAAGYGEQGVR 512 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL---YLNTA 332 A+E LR+E +M LG ++EL LNTA Sbjct: 513 RAVEILRQEIESNMVFLGVTNLKELGPHLLNTA 545 >gi|238496005|ref|XP_002379238.1| FMN-dependent dehydrogenase family protein [Aspergillus flavus NRRL3357] gi|220694118|gb|EED50462.1| FMN-dependent dehydrogenase family protein [Aspergillus flavus NRRL3357] Length = 378 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 79/346 (22%), Positives = 140/346 (40%), Gaps = 74/346 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + + R L I+ D++D S E G K++FPL S ++ + + +A Sbjct: 50 NEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKLAHPDGEVAA 104 Query: 82 --AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K V M + S +S+++ P+ + + L L +++A + Sbjct: 105 SRAAAKYNVCMGLSS----YSNYSLEDVAAQGSGNPYAMQMCVLKDRSLTLQL-LERAEK 159 Query: 140 AVHVLGADGLFLHLN-PL---------------QEIIQPN---------GNTNFA----- 169 A G LFL ++ PL +++ PN T++ Sbjct: 160 A----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNRTDYGESLTN 215 Query: 170 -------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 D + I L + + LK V + D+EL ++ G+ I+ GG Sbjct: 216 QQKDPSLDWETTIPWLRKHTKLQIWLKGV---YTPEDVELAIQYGVDGVIISNHGGRQLD 272 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D + V Q PL+++ GG+R G DI K++ LGAS Sbjct: 273 GVPATLDALRECAPVAQG---RIPLAID--------------GGIRRGSDIFKALALGAS 315 Query: 283 LGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P A + + V A++ L +EF ++M L G + V+E+ Sbjct: 316 HCFVGRIPIWGLAWNGQEGVELAVKILLQEFRITMALAGCRSVKEI 361 >gi|255728821|ref|XP_002549336.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133652|gb|EER33208.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 585 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 123/326 (37%), Gaps = 60/326 (18%) Query: 37 PEISFD--EVDPSVEFLGKKLSFPLLISSMTGGN------NKMIERINRNLAIAAEKTKV 88 P++ D EVD S LG K+SFP+ I++ G K++ R I + Sbjct: 247 PKVMVDVTEVDISTTMLGTKVSFPVYITATALGKLGHPDGEKVLTRSADKQDIIQMIPTL 306 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A + V + + F+L A + +K Q G G Sbjct: 307 ASCSFDEIVDAATDKQTQWFQLYVNADREI---------------TKKIIQHAEKRGIKG 351 Query: 149 LFLHLNPLQ--------------EIIQPNGNTNFADLSSKIA-LLSSAMDVPLLLKEVGC 193 LF+ ++ Q ++ G+ AD S A +SS +D L K++ Sbjct: 352 LFITVDAPQLGRREKDMKSKSINDLSHVQGDDESADRSQGAARAISSFIDTSLSWKDLEW 411 Query: 194 GLSSMDIELGLKSGIRYFD--IAGRGGTSWSRIESH--RDLESDIGIVFQDWGIPTPLS- 248 S + + LK R D +A G + +H R LE P P+ Sbjct: 412 FKSVTKMPIILKGVQRVDDAVLAAEHGCQGVVLSNHGGRQLEYS----------PPPIEV 461 Query: 249 LEMARPYCNEA------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-V 301 L P E + GG+R D+LK+I LGA G+ PFL DA V Sbjct: 462 LAELMPVLREKGLADNFEVYVDGGIRRATDVLKAICLGAKGVGIGRPFLYAMSTYGDAGV 521 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E I+ M LLG + +L Sbjct: 522 TKAIQLLKDEMIMDMRLLGVTSLDQL 547 >gi|50304481|ref|XP_452190.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641322|emb|CAH02583.1| KLLA0B14795p [Kluyveromyces lactis] Length = 556 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 75/324 (23%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVMFS 100 +EVD S +FLG K+ P+ I++ G +++ + NL AA V V Q Sbjct: 235 EEVDTSTKFLGAKVDLPIYITAFAG--SRLAHPMGELNLQSAAYDANVMQMVPKQ----- 287 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK--------AHQAVHVLGADGLFLH 152 S+ ++ PH N L + F Q+ +A + A GLF + Sbjct: 288 -----NSYSHEEFFPHVPDDQNQ---WLQFHFDTQEELDNLDKWVERAGTLPSAKGLFFN 339 Query: 153 LN-----------------PLQEIIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEV 191 ++ P E + + F S I + +P+ LK V Sbjct: 340 VDLADIGNREKDSRQRASQPGSEYLDEMTDNKFGSHPKITWSTIERVMKNTHLPVALKGV 399 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G D+ + + G++ ++ GG R L D+ P L Sbjct: 400 QRG---EDVVIAAQKGVKAVILSNHGG---------RQL---------DFSRPPLEVLVE 438 Query: 252 ARPYCNEA------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD--SSDAVVA 303 A+ E + GG+R G DILK++ LGA+ G+ PFL AM + V Sbjct: 439 AKQMLKEKNLDGKIEIYLDGGVRRGSDILKALCLGATGVGMGRPFLY-AMSGYGEEGVTH 497 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 LR E +M LLG ++++L Sbjct: 498 LFNILRTEIENNMRLLGVDKIEDL 521 >gi|323507643|emb|CBQ67514.1| related to L-lactate dehydrogenase (cytochrome b2) [Sporisorium reilianum] Length = 586 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 30/160 (18%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 IA + +PL LK G+ ++ D+EL + G+ ++ GG R LE Sbjct: 424 IAWFRNTCKLPLYLK----GIQTVEDVELAAQHGVEGVVLSNHGG---------RSLEYS 470 Query: 234 IGIVFQDWGIPTPL----SLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 P PL L RP ++ + GG+R G D+LK++ LGA GL Sbjct: 471 ----------PAPLDVLVELRQRRPDLFDKVEVFLDGGVRRGTDVLKAVALGAKAVGLGR 520 Query: 289 PFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL +A V AI L+ E M LLG + +L Sbjct: 521 PFLYAQSGYGEAGVTRAIHILQDEIHRGMQLLGVTSLDQL 560 >gi|145249024|ref|XP_001400851.1| cytochrome b2 [Aspergillus niger CBS 513.88] gi|134081526|emb|CAK41962.1| unnamed protein product [Aspergillus niger] Length = 500 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P+LLK V C D+ ++ G++ ++ GG S ++ +++ Sbjct: 320 IPWFQSITKMPILLKGVQC---VEDVLRAVEMGVQGVVLSNHGGRQLEFARSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++ R + N+ + GG+R D+LK++ LGA G+ PFL A Sbjct: 377 MPILRE------------RGWENKIEIYIDGGIRRATDMLKALCLGAKGVGIGRPFLY-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ L+ E ++M L+G +++E LN +LI Sbjct: 424 MSAYGQPGVERAMQLLKDEMEMNMRLIGATKIEE--LNPSLI 463 >gi|255712889|ref|XP_002552727.1| KLTH0C11858p [Lachancea thermotolerans] gi|238934106|emb|CAR22289.1| KLTH0C11858p [Lachancea thermotolerans] Length = 555 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 132/320 (41%), Gaps = 50/320 (15%) Query: 36 LPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN--NKMIERINRNLAIAAEKTKVAMAVG 93 L E +D VD S EFLG K+S P+ IS+ G + + E NL AA + + V Sbjct: 226 LQENEYD-VDTSTEFLGSKVSLPVYISAFAGSKWAHPLAEL---NLQSAAYEADIMQMVP 281 Query: 94 SQRVMF-----------SDHNAIKSFELRQ-YAPHTVLISNL------GAVQLNYDF--- 132 Q H + F+ R+ + LI L A+ LN D Sbjct: 282 KQNSYSIEEFYENVPEDQKHWSQYHFDSREEFNEAGTLIKKLEAQPSVKALFLNVDLRDI 341 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEV 191 G ++ L + L I+ + ++A + K I + S+ +P+ LK V Sbjct: 342 GNREKDSRQRALDVESS----KSLSAIV--TSDKSYAKFTWKDIDQIMSSTKLPIGLKGV 395 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G D+ L + G++ ++ GG ++ ++ + ++ G+ + + + Sbjct: 396 QRG---EDVVLAAEKGVKAVVLSNHGGRQLDFSRPPLEVLAEAKQMLKERGLEDKIEIYL 452 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 GG+R G D++K++ LGA GL PFL A + V ++ LR Sbjct: 453 ------------DGGIRRGSDVIKALCLGAKGVGLGRPFLYAMAGYGEEGVSHLLDILRN 500 Query: 311 EFIVSMFLLGTKRVQELYLN 330 E +M LLG +V++L N Sbjct: 501 EMKNNMRLLGVDKVEDLNEN 520 >gi|320580149|gb|EFW94372.1| cytochrome b2, mitochondrial precursor [Pichia angusta DL-1] Length = 438 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K++ LGAS GL PFL A + V AI+ L+ E I M LLG Sbjct: 338 GGIRRGSDIIKALCLGASGVGLGRPFLYSLASYGEEGVQKAIQILKTEMIRDMKLLGVSS 397 Query: 324 VQEL 327 + EL Sbjct: 398 ISEL 401 >gi|115385817|ref|XP_001209455.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114187902|gb|EAU29602.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 490 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 R YC E + GG+R G D++K++ LGA GL P L + V ++ Sbjct: 379 RKYCPEVFDRLDVLVDGGIRRGTDVVKALCLGAKAVGLGRPALWGLGAGGVEGVKRTLQI 438 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L E M LLG +RV+EL ++NT ++ Q Sbjct: 439 LTDETKTCMRLLGVERVEELGPQHINTRIVEQQ 471 >gi|308198269|ref|XP_001386948.2| cytochrome b2, mitochondrial precursor [Scheffersomyces stipitis CBS 6054] gi|149388938|gb|EAZ62925.2| cytochrome b2, mitochondrial precursor [Pichia stipitis CBS 6054] Length = 490 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R D+LK+I LGA G+ PFL DA V AI+ L+ E I++M LLG Sbjct: 392 GGVRRATDVLKAICLGAKGVGIGRPFLYAMSTYGDAGVYKAIQILKDEMIMNMRLLGVTS 451 Query: 324 VQEL 327 + +L Sbjct: 452 IDQL 455 >gi|327278090|ref|XP_003223795.1| PREDICTED: hydroxyacid oxidase 2-like isoform 2 [Anolis carolinensis] Length = 361 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 27/165 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L S +PL++K + L+ D EL ++ G++ ++ GG R L+ Sbjct: 218 IAWLKSLTHLPLIIKGI---LTKEDAELAVRHGVQGIIVSNHGG---------RQLD--- 262 Query: 235 GIVFQDWGIPTPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+P + +E+ + + GG+R G D+LK++ +GA + P + Sbjct: 263 -------GVPATIDALVEVIAAVQGKVEVYLDGGIRTGSDLLKALAIGAKCVFIGRPAIW 315 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A + ++ ++ L+ EF +SM L G + V E ++ L+R+ Sbjct: 316 GLAYKGEEGLIQVLKILKNEFSLSMALAGCRNVSE--IDQRLVRY 358 >gi|5262950|emb|CAB45871.1| cytochrome b2 [Kluyveromyces lactis] Length = 585 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA GL PFL + + V AIE L+ E +SM LLG Sbjct: 487 GGVRRGTDILKALCLGAKGVGLGRPFLYSNSCYGKEGVKKAIELLKDELEMSMRLLGVTS 546 Query: 324 VQEL---YLNTALI 334 + +L YL+ + I Sbjct: 547 IDQLSEKYLDLSTI 560 >gi|327278088|ref|XP_003223794.1| PREDICTED: hydroxyacid oxidase 2-like isoform 1 [Anolis carolinensis] Length = 356 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 27/193 (13%) Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +G F N E P + + + IA L S +PL++K + L+ D EL ++ Sbjct: 185 EGAFEGENDHSEYGLPRDSIDPSVSWKDIAWLKSLTHLPLIIKGI---LTKEDAELAVRH 241 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS--LEMARPYCNEAQFIAS 264 G++ ++ GG R L+ G+P + +E+ + + Sbjct: 242 GVQGIIVSNHGG---------RQLD----------GVPATIDALVEVIAAVQGKVEVYLD 282 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ +GA + P + A + ++ ++ L+ EF +SM L G + Sbjct: 283 GGIRTGSDLLKALAIGAKCVFIGRPAIWGLAYKGEEGLIQVLKILKNEFSLSMALAGCRN 342 Query: 324 VQELYLNTALIRH 336 V E ++ L+R+ Sbjct: 343 VSE--IDQRLVRY 353 >gi|50306425|ref|XP_453186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642320|emb|CAH00282.1| KLLA0D02640p [Kluyveromyces lactis] Length = 589 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA GL PFL + + V AIE L+ E +SM LLG Sbjct: 488 GGVRRGTDILKALCLGAKGVGLGRPFLYSNSCYGKEGVKKAIELLKDELEMSMRLLGVTS 547 Query: 324 VQEL---YLNTALI 334 + +L YL+ + I Sbjct: 548 IDQLSEKYLDLSTI 561 >gi|41053573|ref|NP_956777.1| hydroxyacid oxidase 2 [Danio rerio] gi|32766675|gb|AAH55205.1| Hydroxyacid oxidase 2 (long chain) [Danio rerio] Length = 357 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 26/188 (13%) Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 +G+F QE NT +S K + L S +P+++K + L+ D EL ++ Sbjct: 185 EGMFQEQTEAQEEYGIPANTLDPSISWKDVCWLQSLTRLPIIIKGI---LTKEDAELAVE 241 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIA 263 G++ ++ GG R L+ G P + E+ + Sbjct: 242 HGVQGIIVSNHGG---------RQLD----------GGPATIDCLPEIVDTVQGRVEVYM 282 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK+I LGA + P + A D V + L EF +SM L G + Sbjct: 283 DGGIRTGNDVLKAIALGARCVFIGRPAIWGLAYKGEDGVKEILNILHDEFRLSMVLAGCR 342 Query: 323 RVQELYLN 330 V E+ N Sbjct: 343 NVAEINRN 350 >gi|255954989|ref|XP_002568247.1| Pc21g12160 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589958|emb|CAP96113.1| Pc21g12160 [Penicillium chrysogenum Wisconsin 54-1255] Length = 488 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 26/172 (15%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N+ DL A + +P++LK V G D+ + ++ G+ ++ GG S ++ Sbjct: 318 NWEDL----AWIKKVSGLPIVLKGVQTG---ADVRMAMEYGVDAIMLSNHGGRSLDTVQP 370 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGG 285 I T L L P + GG+R G DILK++ LGA+ G Sbjct: 371 ---------------AIITLLELHRTCPEVFGRMEIYIDGGIRRGTDILKALALGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALI 334 + P+L + V + L+ E + +M L G + + + +NTA + Sbjct: 416 IGRPYLYSLTYGQEGVEHLTQILKDELVSAMKLSGITHIDQAHPGMVNTAYV 467 >gi|196011862|ref|XP_002115794.1| hypothetical protein TRIADDRAFT_50780 [Trichoplax adhaerens] gi|190581570|gb|EDV21646.1| hypothetical protein TRIADDRAFT_50780 [Trichoplax adhaerens] Length = 368 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L++ D E+ ++ G+ ++ GG R L+ Sbjct: 221 ITWLKSITSLPVIVKGI---LTAEDAEMAVRVGVEGIWVSNHGG---------RQLD--- 265 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+PT + E+ + N A+ A GG R G D+ K+I LGA + P L Sbjct: 266 -------GVPTAIEALPEIVKAVNNRAEIYADGGFRTGTDVFKAIALGARAVFVGRPILW 318 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++ L++EF +M L G ++++ Sbjct: 319 GLVYNGQKGVEKVLQLLQQEFHRTMQLSGCVSIKDI 354 >gi|67524265|ref|XP_660194.1| hypothetical protein AN2590.2 [Aspergillus nidulans FGSC A4] gi|40745539|gb|EAA64695.1| hypothetical protein AN2590.2 [Aspergillus nidulans FGSC A4] gi|259488027|tpe|CBF87158.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 488 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 28/169 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A + S +P++LK + S+ D ++ ++ + ++ GG R+L Sbjct: 322 LAWIRSVTKLPIILKGI---TSAEDAKIAMQYKVDGILLSNHGG---------RNL---- 365 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 D+ PT L L C E + GG R G DI+K++ LGA G+ F Sbjct: 366 -----DYSPPTILLLLELHKNCPEIFDKMEIYVDGGFRRGADIIKALCLGAKAVGMGRSF 420 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L ++ V I+ L+ E M L+G K + E+Y +NTA + H Sbjct: 421 LYALNYGTEGVEHLIQLLKAEMEAVMKLIGIKDLSEVYPGLVNTADVDH 469 >gi|242806118|ref|XP_002484679.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] gi|218715304|gb|EED14726.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] Length = 385 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + + GG+R G D++K++ LGA G+ S F Sbjct: 265 DTAPPAVHTLLEIRKYCPEVFDIVEVLVDGGIRRGTDVVKALCLGAKGVGIGRSVFWGLG 324 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 V IE L E M LLG +RV +L ++NT++I Q Sbjct: 325 AGGVRGVERTIEILADEIKTCMQLLGVRRVADLGLQHVNTSIIEQQ 370 >gi|170098374|ref|XP_001880406.1| predicted protein [Laccaria bicolor S238N-H82] gi|164644844|gb|EDR09093.1| predicted protein [Laccaria bicolor S238N-H82] Length = 506 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 255 YCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEF 312 + NE Q GG+R D++K+I LGA+ G+ PFL + S+ V A++ L EF Sbjct: 390 FPNEKFQLFVDGGVRRATDVIKAIALGATAVGIGRPFLYAFSSYGSEGVERALQILHDEF 449 Query: 313 IVSMFLLGTKRVQEL 327 ++M LLG + V +L Sbjct: 450 EMNMRLLGARSVADL 464 >gi|255526071|ref|ZP_05392994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium carboxidivorans P7] gi|296187119|ref|ZP_06855517.1| dehydrogenase, FMN-dependent [Clostridium carboxidivorans P7] gi|255510257|gb|EET86574.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium carboxidivorans P7] gi|296048313|gb|EFG87749.1| dehydrogenase, FMN-dependent [Clostridium carboxidivorans P7] Length = 337 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/326 (21%), Positives = 133/326 (40%), Gaps = 62/326 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + D + L R + + + D S E GKK+ P+ + ++G M + Sbjct: 48 NVEALDSYKLNMRVIHDAK--DPDTSTELFGKKMEVPVFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQ-----RVMFSDHNAIKSF------ELRQYAPHTVLI------SN-L 123 E+ ++ +G M D A+ SF +L+++ + I SN + Sbjct: 101 --EEQYISWVIGGCLDAGIYPMVGD-TAVDSFLITNLQQLKEFNGEGIAIIKPWENSNVI 157 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 ++L+ + G + G L LH P + P +I + + Sbjct: 158 NKIKLSEEAGAFAVGMDIDAAGLITLALHGKP----VGPK-------TVEQIKEIVQSTK 206 Query: 184 VPLLLKEVGCGLSSMD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P +LK G+ ++D +L +++G+ ++ GG + D+ Sbjct: 207 LPFILK----GIMTVDEAKLAVEAGVDAIVVSNHGGRVLDQTPGVADV------------ 250 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 +P E+A + +A GG+RNGVD+LK + LGA + PF+ + + V Sbjct: 251 LP-----EIAEAVKGKVTILADGGVRNGVDVLKMLALGADAVLIGRPFVTASFGGEREGV 305 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 I++++ E +M L G K V+++ Sbjct: 306 KLYIDTIKSELKSAMVLTGCKSVKDV 331 >gi|242815236|ref|XP_002486530.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] gi|218714869|gb|EED14292.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] Length = 497 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ +++G++ ++ GG S ++ +++ Sbjct: 318 IPWFLSITKMPIILKGVQC---VEDVLRAVEAGVQGVVLSNHGGRQLDFARSGIEILAEV 374 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 V ++ R + N+ + GG+R G DI+K++ LGA G+ PFL A Sbjct: 375 MPVLRE------------RGWENKIEIFIDGGIRRGTDIIKALCLGAKGVGIGRPFLY-A 421 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + + V A + L+ E ++M L+G + +L Sbjct: 422 MSAYGQEGVERAFQLLKDELEMNMRLIGAATIDDL 456 >gi|238500952|ref|XP_002381710.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] gi|220691947|gb|EED48294.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] Length = 457 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 28/170 (16%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + C D L ++ G + ++ GG R Sbjct: 299 DWVSAMKWLRGMTDLPIAIKGIQCW---EDAVLCMEYGAHPW-LSNHGG---------RQ 345 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGG 285 L+S V +L R +C E + I GG+ G DI+K++ LGA G Sbjct: 346 LDSAPSAV---------ETLVSIRQHCPEVFDKCEVIVDGGITRGSDIVKALALGAKGVG 396 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L PFL A V AI L+ E +M LLG + + LN + +R Sbjct: 397 LGRPFLYSAAFGGAGVSKAIRILKNEVETTMALLGITSLNQ--LNPSYVR 444 >gi|149239504|ref|XP_001525628.1| cytochrome b2, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146451121|gb|EDK45377.1| cytochrome b2, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 582 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMF 317 + GG+R DILK+I LGA G+ PFL AM + D V+ A++ L++E ++M Sbjct: 475 EVYVDGGVRRATDILKAIALGAKGVGIGRPFLY-AMSTYGDDGVIRAMQILKEELEMNMR 533 Query: 318 LLGTKRVQELYLN 330 LLG + +L L+ Sbjct: 534 LLGVTLIDQLNLD 546 >gi|289619619|emb|CBI53902.1| unnamed protein product [Sordaria macrospora] Length = 501 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V D+ ++ G++ ++ GG ++E R S I Sbjct: 319 IPWFQSITKMPIILKGVQ---RVEDVIKAIEVGVQGVVLSNHGG---RQLEFAR---SAI 369 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ + + L LE N+ + GG+R G DILK++ LGA G+ PFL A Sbjct: 370 EVLAETMPVLRELGLE------NKIEIYIDGGIRRGTDILKALCLGAKGVGIGRPFLY-A 422 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + D V A++ L+ E ++M L+G ++++L Sbjct: 423 MSAYGFDGVDRAMQLLKDEMEMNMRLIGATKIEDL 457 >gi|294891763|ref|XP_002773726.1| cytochrome b2, putative [Perkinsus marinus ATCC 50983] gi|239878930|gb|EER05542.1| cytochrome b2, putative [Perkinsus marinus ATCC 50983] Length = 308 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES-LRKEFIVSM 316 E GG+R G DI+K I LGAS G+ PF+ +A + + + L++E +V+M Sbjct: 216 EFSVFVDGGVRRGTDIIKCIALGASAVGIGRPFMTAMAAFGEAGMVRLAALLKEEILVNM 275 Query: 317 FLLGTKRVQEL 327 LLG + ++EL Sbjct: 276 RLLGCRSLEEL 286 >gi|83776334|dbj|BAE66453.1| unnamed protein product [Aspergillus oryzae] Length = 352 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 138/350 (39%), Gaps = 75/350 (21%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N + + L R L ++S E D S G+K++FPL ++ + + + Sbjct: 20 VAENSTAYGKYRLRPRVLVDVS--ETDTSTTVFGQKITFPLCVAP---AGIQAMAHPDGE 74 Query: 79 LAI--AAEKTKVAMAVGSQRVMFSDH----------------NAIKSFELRQYAPHTVLI 120 LA A K +V M V S F+++ + ++ + ++ A +I Sbjct: 75 LATSRACAKRQVHMGVSS----FANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 130 Query: 121 -----SNLGAVQLNYD---FGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNG------- 164 + A+ L D GV+ + +GL F L E+I+ Sbjct: 131 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 190 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 N++ + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 191 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGG----- 242 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSII 278 R L+ TP ++++ P C +A + GG+RNG DI K++ Sbjct: 243 ----RQLDG------------TPATIDVL-PECVKAAKGKIRVHIDGGVRNGTDIFKALA 285 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA + P + A D ++ L EF M L G K + ++ Sbjct: 286 LGAECCWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 335 >gi|255948654|ref|XP_002565094.1| Pc22g11470 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592111|emb|CAP98435.1| Pc22g11470 [Penicillium chrysogenum Wisconsin 54-1255] Length = 502 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L R YC E + GG+R G D +K++ LGA GL P L A Sbjct: 378 DTAPPAVHTLLEIRKYCPEVFDKIEVYVDGGIRRGTDAVKALCLGAKAVGLGRPALWGLA 437 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 D V ++ L E M LLG +RV +L ++NT + Q Sbjct: 438 AGGVDGVRRTLQILNDEIKTCMRLLGVERVDQLGLQHINTRVTEQQ 483 >gi|121714635|ref|XP_001274928.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] gi|119403082|gb|EAW13502.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] Length = 500 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ +++G+ ++ GG S ++ +++ Sbjct: 320 IPWFKSITKMPIILKGVQC---VEDVLRAVEAGVDGVVLSNHGGRQLEFARSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ G + + + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPALRERG------------WEKKIEVYVDGGVRRATDILKALCLGAQGVGIGRPFLY-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ LR E ++M L+G + ++E LN +LI Sbjct: 424 MSAYGQPGVERAMQLLRDEMEMNMRLIGARTIEE--LNPSLI 463 >gi|317159160|ref|XP_001827586.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 374 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 138/350 (39%), Gaps = 75/350 (21%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N + + L R L ++S E D S G+K++FPL ++ + + + Sbjct: 42 VAENSTAYGKYRLRPRVLVDVS--ETDTSTTVFGQKITFPLCVAP---AGIQAMAHPDGE 96 Query: 79 LAI--AAEKTKVAMAVGSQRVMFSDHN----------------AIKSFELRQYAPHTVLI 120 LA A K +V M V S F++++ ++ + ++ A +I Sbjct: 97 LATSRACAKRQVHMGVSS----FANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 152 Query: 121 -----SNLGAVQLNYD---FGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNG------- 164 + A+ L D GV+ + +GL F L E+I+ Sbjct: 153 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 212 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 N++ + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 213 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGG----- 264 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSII 278 R L+ TP ++++ P C +A + GG+RNG DI K++ Sbjct: 265 ----RQLDG------------TPATIDVL-PECVKAAKGKIRVHIDGGVRNGTDIFKALA 307 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA + P + A D ++ L EF M L G K + ++ Sbjct: 308 LGAECCWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 357 >gi|225636766|dbj|BAH29964.1| glyoxylate dehydrogenase [Fomitopsis palustris] Length = 502 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 18/156 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK + ++ D L ++G++ ++ GG S ++ ++ Sbjct: 322 IPWFKSITKMPIILKGIS---TAEDAILAYEAGVQGIVLSNHGGRQLDTARSGLEVLVEV 378 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR Y + F GG+R D+LK++ LGA G+ PFL Sbjct: 379 VPALR------------ARGYFPDPNFEIFVDGGVRRASDVLKALALGAKAVGVGRPFLY 426 Query: 293 PAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V AI+ R EF ++M LLG + + EL Sbjct: 427 AFCSYGQEGVEKAIQIFRDEFEMNMRLLGARTIDEL 462 >gi|322700132|gb|EFY91889.1| mitochondrial cytochrome b2, putative [Metarhizium acridum CQMa 102] Length = 483 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + + GG R G DI+K+I LGAS G+ PFL + V AI LR E +M L Sbjct: 383 EVLIDGGFRRGSDIVKAICLGASAVGVGRPFLYAVNYGTAGVEHAIAILRDEIETAMRLC 442 Query: 320 GTKRVQEL----YLNTALIRH 336 G + + +LNT+ + H Sbjct: 443 GMTNLMDEAGPDFLNTSPVDH 463 >gi|227889188|ref|ZP_04006993.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus johnsonii ATCC 33200] gi|227850417|gb|EEJ60503.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus johnsonii ATCC 33200] Length = 409 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 18/146 (12%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++K V C +M L + +G ++ GG + D+ +I + Sbjct: 232 DVPVIVKGVECAEDAM---LAVGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVRSSN 288 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 P+ L+ GG+R G + K++ LGA L G+ PFL + + V Sbjct: 289 HRVPVILD--------------GGVRRGSHVFKALALGADLVGIGRPFLYGLTLGGAQGV 334 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 + IE L KE ++ M L K ++++ Sbjct: 335 QSVIEQLNKELLIDMQLTVCKTIEDI 360 >gi|50292501|ref|XP_448683.1| hypothetical protein [Candida glabrata CBS 138] gi|49527995|emb|CAG61646.1| unnamed protein product [Candida glabrata] Length = 593 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G D++K++ LGAS GL PFL + D V AI+ L+ E ++M L Sbjct: 484 EVFVDGGVRRGTDVIKALCLGASGVGLGRPFLYANSCYGKDGVQKAIDLLKTEIEMNMRL 543 Query: 319 LGTKRVQEL 327 LG ++++ Sbjct: 544 LGVTSIKDM 552 >gi|83773777|dbj|BAE63902.1| unnamed protein product [Aspergillus oryzae] Length = 513 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 26/162 (16%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + C D L ++ G + ++ GG R Sbjct: 324 DWVSAMKWLRGMTDLPIAIKGIQCW---EDAVLCMEYGAHPW-LSNHGG---------RQ 370 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGG 285 L+S V +L R +C E + I GG+ G DI+K++ LGA G Sbjct: 371 LDSAPSAV---------ETLVSIRQHCPEVFDKCEVIVDGGITRGSDIVKALALGAKGVG 421 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PFL A V AI L+ E +M LLG + +L Sbjct: 422 LGRPFLYSAAFGGAGVSKAIRILKNEVETTMALLGITSLNQL 463 >gi|296421106|ref|XP_002840107.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636319|emb|CAZ84298.1| unnamed protein product [Tuber melanosporum] Length = 499 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIV 314 ++ + GG+R DI+K++ LGA G+ PFL AM + VV A++ L+ EF V Sbjct: 387 DKIEVYVDGGVRRATDIIKALCLGAKGVGIGRPFLY-AMSAYGEPGVVHAMQLLKDEFEV 445 Query: 315 SMFLLGTKRVQEL 327 +M L+G + V EL Sbjct: 446 AMRLIGARSVGEL 458 >gi|67904054|ref|XP_682283.1| hypothetical protein AN9014.2 [Aspergillus nidulans FGSC A4] gi|40745190|gb|EAA64346.1| hypothetical protein AN9014.2 [Aspergillus nidulans FGSC A4] gi|259486535|tpe|CBF84460.1| TPA: FMN-dependent dehydrogenase family protein (AFU_orthologue; AFUA_8G02300) [Aspergillus nidulans FGSC A4] Length = 323 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 76/315 (24%), Positives = 124/315 (39%), Gaps = 63/315 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + ++ R L I+ +VD S E LG K+S P S ++ + + LA Sbjct: 46 NEAAFDRYKILPRVL--INVAKVDTSTEILGTKVSLPFGFSPAA---SQKLAHPDGELAT 100 Query: 82 --AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA + M + S +S+++ P+ + + L + +Q+A Sbjct: 101 SRAAANFGICMGLSS----YSNYSLEDVAAQGMGNPYVMQMCVLRDRSITLQL-LQRAEN 155 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 A + +P+ D +S I L + + LK V S D Sbjct: 156 APN------------------RPSLPDPSLDWASTIPWLREHTSMQIWLKGV---CSPAD 194 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNE 258 +EL + G+ I+ GG R L+ G+P L SL + C E Sbjct: 195 VELAIHYGVDGIVISNHGG---------RQLD----------GVPATLDSLRL----CAE 231 Query: 259 AQ-----FIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEF 312 GG+R G DI K++ LGA + P A + + V AI+ LR+E Sbjct: 232 VAKGRIPLAIDGGIRRGSDIFKALALGARYCFMGRIPIWGLAYNGQEGVELAIKILRQEL 291 Query: 313 IVSMFLLGTKRVQEL 327 V+M L G + + E+ Sbjct: 292 RVTMALAGCQTISEI 306 >gi|322712484|gb|EFZ04057.1| hypothetical protein MAA_01131 [Metarhizium anisopliae ARSEF 23] Length = 470 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR ++ + GG+R DI+K++ LGA G+ PFL AM + D V A++ L+ Sbjct: 353 ARGLQDKIEIFIDGGIRRATDIIKALCLGARGVGIGRPFLY-AMSAYGQDGVEKAMQLLK 411 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M L+G RV++L Sbjct: 412 DEMEMNMRLIGCARVEDL 429 >gi|255655275|ref|ZP_05400684.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-23m63] gi|296451259|ref|ZP_06892999.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296880389|ref|ZP_06904352.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] gi|296259865|gb|EFH06720.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296428630|gb|EFH14514.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] Length = 338 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 58/325 (17%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + ++S D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIHDVS--NPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISN-------LGAVQ 127 I E A M D A+ +F + ++Y ++ + ++ Sbjct: 105 I--EPVVAGCANSGIYAMVGD-TAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P ++ N +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP---VLPKN--------VEQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG R L+ TP Sbjct: 211 LKGI---MTVEDALMAVEAGVDAIVVSNHGG---------RVLDC------------TPG 246 Query: 248 SLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 + E +A + +A GG+R G+D+LK I LGA + PF+ + ++D V Sbjct: 247 ACEVLPKIADAVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVE 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + L+ E SM L G + ++++ Sbjct: 307 TYVNKLQSELSSSMILTGCQTIKDI 331 >gi|168206069|ref|ZP_02632074.1| FMN-dependent dehydrogenase [Clostridium perfringens E str. JGS1987] gi|170662420|gb|EDT15103.1| FMN-dependent dehydrogenase [Clostridium perfringens E str. JGS1987] Length = 340 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 67/334 (20%), Positives = 126/334 (37%), Gaps = 74/334 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPS--VEFLGKKLSFPLLISSMTGG----NNKMIER 74 RN K ++ L R + D +P+ +E GK + PL + +TG K+ ER Sbjct: 46 RNVKALEEIKLNMRTI----HDAKNPTTNIEIFGKNMDLPLFAAPITGTMLNMGGKVSER 101 Query: 75 ----------INRNLAIAAEKTKVAMAVGSQRVMFSDHNA-----IKSFELRQYAPHTVL 119 ++ + T V + + + + ++N IK ++ + Sbjct: 102 EYIEGVVKGCLDSGIYPMVGDTAVDLCLATNLEVIEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 GA + GV + L +G + L+EI + L Sbjct: 162 AEKAGA----FAVGVDIDAAGLITLAMNGKPVEPKNLEEIKE----------------LV 201 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++ +P +LK + ++ + EL +++G+ ++ GG + Sbjct: 202 NSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQ---------------- 242 Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 TP + E+ + + + + GG+R GVDILK I LGA + PF+ Sbjct: 243 -----TPATCEVLKEIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATF 297 Query: 296 -DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 D + V + SL+ E +M L G ++ +Y Sbjct: 298 ADGAKGVEEYVNSLKGELKSAMVLTGCNSIENIY 331 >gi|156841345|ref|XP_001644046.1| hypothetical protein Kpol_1014p5 [Vanderwaltozyma polyspora DSM 70294] gi|156114680|gb|EDO16188.1| hypothetical protein Kpol_1014p5 [Vanderwaltozyma polyspora DSM 70294] Length = 596 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA GL PF+ + + V A++ LR+E +SM LLG Sbjct: 492 GGVRRGTDILKALCLGAKGVGLGRPFIYANSCYGAAGVQRAVDILREELEMSMRLLGVTS 551 Query: 324 VQEL 327 V++L Sbjct: 552 VKDL 555 >gi|67526887|ref|XP_661505.1| hypothetical protein AN3901.2 [Aspergillus nidulans FGSC A4] gi|40739642|gb|EAA58832.1| hypothetical protein AN3901.2 [Aspergillus nidulans FGSC A4] Length = 493 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 18/163 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ +++G++ ++ GG S ++ + + Sbjct: 320 IPWFQSVTKMPIVLKGVQC---VEDVLRAVEAGVQGVVLSNHGGRQLDTAPSGIEVLAQV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++ R + N + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPILRE------------RGWENRIEIFIDGGIRRATDILKALCLGAKGVGIGRPFLF-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 M + V A++ L+ E ++M L+G +++ +L + +R Sbjct: 424 MSAYGQPGVNRAMQLLKDELEMNMRLIGAQKIADLNPSMVDVR 466 >gi|126698860|ref|YP_001087757.1| putative FMN-dependent dehydrogenase [Clostridium difficile 630] gi|255100281|ref|ZP_05329258.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-63q42] gi|255306220|ref|ZP_05350392.1| putative FMN-dependent dehydrogenase [Clostridium difficile ATCC 43255] gi|115250297|emb|CAJ68119.1| putative FMN-dependent dehydrogenase [Clostridium difficile] Length = 338 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 58/325 (17%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + ++S D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIHDVS--NPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISN-------LGAVQ 127 I E A M D A+ +F + ++Y ++ + ++ Sbjct: 105 I--EPVVAGCANSGIYAMVGD-TAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P ++ N +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP---VLPKN--------VKQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG R L+ TP Sbjct: 211 LKGI---MTVEDALMAVEAGVDAIVVSNHGG---------RVLDC------------TPG 246 Query: 248 SLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 + E +A + +A GG+R G+D+LK I LGA + PF+ + ++D V Sbjct: 247 ACEVLPKIADAVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVE 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + L+ E SM L G + ++++ Sbjct: 307 TYVNKLQSELSSSMILTGCQTIKDI 331 >gi|254974808|ref|ZP_05271280.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-66c26] gi|255092196|ref|ZP_05321674.1| putative FMN-dependent dehydrogenase [Clostridium difficile CIP 107932] gi|255313935|ref|ZP_05355518.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-76w55] gi|255516615|ref|ZP_05384291.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-97b34] gi|255649715|ref|ZP_05396617.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-37x79] gi|260682870|ref|YP_003214155.1| putative FMN-dependent dehydrogenase [Clostridium difficile CD196] gi|260686468|ref|YP_003217601.1| putative FMN-dependent dehydrogenase [Clostridium difficile R20291] gi|306519827|ref|ZP_07406174.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-32g58] gi|260209033|emb|CBA62139.1| putative FMN-dependent dehydrogenase [Clostridium difficile CD196] gi|260212484|emb|CBE03399.1| putative FMN-dependent dehydrogenase [Clostridium difficile R20291] Length = 338 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 58/325 (17%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + ++S D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIHDVS--NPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISN-------LGAVQ 127 I E A M D A+ +F + ++Y ++ + ++ Sbjct: 105 I--EPVVAGCANSGIYAMVGD-TAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P ++ N +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP---VLPKN--------VKQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG R L+ TP Sbjct: 211 LKGI---MTVEDALMAVEAGVYAIVVSNHGG---------RVLDC------------TPG 246 Query: 248 SLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 + E +A + +A GG+R G+D+LK I LGA + PF+ + ++D V Sbjct: 247 ACEVLPKIADAVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVE 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + L+ E SM L G + ++++ Sbjct: 307 TYVNKLQSELSSSMILTGCQTIKDI 331 >gi|300856599|ref|YP_003781583.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium ljungdahlii DSM 13528] gi|300436714|gb|ADK16481.1| predicted FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium ljungdahlii DSM 13528] Length = 338 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 59/297 (19%), Positives = 119/297 (40%), Gaps = 48/297 (16%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D S+E GKK+ P+ + ++G M + I+ + + + + A Sbjct: 69 DTSIELFGKKMDIPVFAAPVSGTTLNMGGKFTEEEYIS---SVIGGCLDAGIYPMVGDTA 125 Query: 105 IKSF------ELRQYAPHTVLI-------SNLGAVQLNYDFGVQKAHQAVHVLGADGLFL 151 + SF +L+++ + + + + ++L G + G L L Sbjct: 126 VDSFLITNLEKLKEFNGEGIAVIKPWENKNVISKIKLAEKAGAFAVGMDIDAAGLITLAL 185 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H P+ G ++ + + +P +LK + ++ + EL +K+G+ Sbjct: 186 HGKPV-------GPKTLEEIKEVV----ESTKLPFILKGI---MTPDEAELAVKAGVSAI 231 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG ++ Q G+ L E+A+ + +A GG+R GV Sbjct: 232 VVSNHGGR----------------VLDQTPGVAEVLP-EIAKLVKGKVTILADGGVRTGV 274 Query: 272 DILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D+LK + LGA + PF+ + + V +E+L+ E +M L G K V+ + Sbjct: 275 DVLKMLALGADAVLIGRPFVTASFGGQREGVKVYVENLKSELKSAMVLTGCKSVKNV 331 >gi|317155348|ref|XP_001825035.2| hypothetical protein AOR_1_74074 [Aspergillus oryzae RIB40] Length = 957 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 253 RPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 R +C E + I GG+ G DI+K++ LGA GL PFL A V AI L Sbjct: 860 RQHCPEVFDKCEVIVDGGITRGSDIVKALALGAKGVGLGRPFLYSAAFGGAGVSKAIRIL 919 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + E +M LLG + +L Sbjct: 920 KNEVETTMALLGITSLNQL 938 >gi|299755726|ref|XP_001828841.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] gi|298411354|gb|EAU92848.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] Length = 502 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 10/159 (6%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + C ++ GI ++ GG S S + S DI Sbjct: 330 IPWLRSITKLPIVIKGIQCVEDAVAAADAGVDGIL---LSNHGGNSTSMLSSVARFNQDI 386 Query: 235 GIVFQDWGIPTPLS----LEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 D+ +P P+ + + RP + + GG+ G D++K++ LGA GL Sbjct: 387 AGRQLDYSLP-PIEVLHRIRLERPDVFDRLEVYIDGGIYRGTDVVKALCLGARAVGLGRA 445 Query: 290 FLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL +A V+ + L++E + +M L+G + V EL Sbjct: 446 FLYAQSAYGEAGVIKITQLLKREIVTAMRLVGARNVAEL 484 >gi|238507227|ref|XP_002384815.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] gi|220689528|gb|EED45879.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] Length = 374 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 74/347 (21%), Positives = 135/347 (38%), Gaps = 69/347 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N + + L R L ++S E D S G+K++FPL ++ + + + Sbjct: 42 VAENSTAYGKYRLRPRVLVDVS--ETDTSTTVFGQKITFPLCVAP---AGIQAMAHPDGE 96 Query: 79 LAI--AAEKTKVAMAVGSQRVMFSDHN----------------AIKSFELRQYAPHTVLI 120 LA A K +V M V S F++++ ++ + ++ A +I Sbjct: 97 LATSRACAKRQVHMGVSS----FANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 152 Query: 121 -----SNLGAVQLNYD---FGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNG------- 164 + A+ L D GV+ + +GL F L E+I+ Sbjct: 153 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 212 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 N++ + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 213 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGG----- 264 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 R L+ G P + + E + + + GG+RNG DI K++ LGA Sbjct: 265 ----RQLD----------GTPATIDVLQECVKAAKGKIRVHIDGGVRNGTDIFKALALGA 310 Query: 282 SLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P + A D ++ L EF M L G K + ++ Sbjct: 311 ECCWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 357 >gi|259481530|tpe|CBF75136.1| TPA: mitochondrial cytochrome b2, putative (AFU_orthologue; AFUA_4G03120) [Aspergillus nidulans FGSC A4] Length = 500 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 18/163 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ +++G++ ++ GG S ++ + + Sbjct: 320 IPWFQSVTKMPIVLKGVQC---VEDVLRAVEAGVQGVVLSNHGGRQLDTAPSGIEVLAQV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + ++ R + N + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPILRE------------RGWENRIEIFIDGGIRRATDILKALCLGAKGVGIGRPFLF-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 M + V A++ L+ E ++M L+G +++ +L + +R Sbjct: 424 MSAYGQPGVNRAMQLLKDELEMNMRLIGAQKIADLNPSMVDVR 466 >gi|291237268|ref|XP_002738559.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 369 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 64/353 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N+K F L+ R L ++S + D S +G + FP+ I+S + + + Sbjct: 40 DENRKAFSRLKLLPRVLRDVS--KRDLSTTIVGNPIQFPVCIAS-SAFHRLACSDGEAST 96 Query: 80 AIAAEKTKVAMAVGS------QRVMFSDHNAIKSFELRQYAPHTVLI--------SNLGA 125 A AA+ + + + + V + +K F+L + P V + + A Sbjct: 97 AKAAKAMNTCIMLSTYSTTPLEDVAAAGSGVLKWFQLYIWNPREVSVNLIKRAETTGFKA 156 Query: 126 VQLNYDFGVQKAHQAVHVLGADGL-----FLHLNPLQEIIQPN--------GNTNFADLS 172 + L D + G L +HL + + N G N D + Sbjct: 157 LVLTVDTPATGKRRIDIYSGGFTLPPHLELVHLPERYRVRKKNKHADQDYGGPKNLLDTT 216 Query: 173 ---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 IA + S +P++LK + LS D L ++ + ++ GG R Sbjct: 217 LTWECIAWMRSVTKLPIVLKGI---LSPEDALLAVEHKVDGIIVSNHGG---------RQ 264 Query: 230 LESDIGIVFQDWGIPTPLSLEM----ARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 L++ P ++EM + + + GG+RNG D+LK+I LGA Sbjct: 265 LDT------------VPATIEMLPQIVKAVNGKLEVYLDGGVRNGTDVLKAIALGARAVF 312 Query: 286 LASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + + ++ + ++ L+ EF ++M L G V + +N++L+ HQ Sbjct: 313 VGRPIIYGLVYAAKEGATQVLQILKDEFSLAMALSGCATVND--INSSLVVHQ 363 >gi|119496347|ref|XP_001264947.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] gi|119413109|gb|EAW23050.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] Length = 497 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 R YC E GG+R G D++K++ LGA G+ P L D V ++ Sbjct: 386 RKYCPEVFDKLDVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLGAGGVDGVKRTLQI 445 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L E M LLG +RV++L ++NT ++ Q Sbjct: 446 LADETKTCMRLLGVERVEDLGPQHINTRVVEQQ 478 >gi|116196338|ref|XP_001223981.1| hypothetical protein CHGG_04767 [Chaetomium globosum CBS 148.51] gi|88180680|gb|EAQ88148.1| hypothetical protein CHGG_04767 [Chaetomium globosum CBS 148.51] Length = 502 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 27/170 (15%) Query: 166 TNFADLS---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 ++F D S + I S +P++LK V D+ ++G++ ++ GG Sbjct: 304 SSFIDPSLSWADIPWFRSITKMPIVLKGVQ---RVEDVVKAAEAGVQGVVLSNHGG---- 356 Query: 223 RIESHRDLE---SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 R LE S I ++ + + L LE N+ + GG+R DILK++ L Sbjct: 357 -----RQLEFARSAIEVLAETMPVLRELGLE------NKIEIYVDGGVRRATDILKALCL 405 Query: 280 GASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA G+ PFL AM + D V A++ L+ E + M L+G + + EL Sbjct: 406 GAKGVGIGRPFLY-AMSAYGQDGVDRAMQLLKDEMEMGMRLIGARTIAEL 454 >gi|322695403|gb|EFY87212.1| mitochondrial cytochrome b2, putative [Metarhizium acridum CQMa 102] Length = 477 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR ++ + GG+R DI+K++ LGA G+ PFL AM + D V A++ L+ Sbjct: 360 ARGLQDKIEIFIDGGIRRATDIIKALCLGARGVGIGRPFLY-AMSAYGQDGVEKAMQLLK 418 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 E + M L+G RV++ LN +L+ Sbjct: 419 DEMEMGMRLIGCARVED--LNPSLV 441 >gi|149180363|ref|ZP_01858868.1| isopentenyl-diphosphate delta-isomerase II 2 [Bacillus sp. SG-1] gi|148852555|gb|EDL66700.1| isopentenyl-diphosphate delta-isomerase II 2 [Bacillus sp. SG-1] Length = 383 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 29/150 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D+P+LLK V + D +L L+ + ++ GG R L D G Sbjct: 250 DLPILLKGV---VHPEDAKLALQYKVDGLIVSNHGG---------RQL---------DHG 288 Query: 243 IPTPLSLEMARPYCNEAQ----FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 + T L++ C Q + G+R G DI K+I LGA+ + PF+ A+D Sbjct: 289 VAT---LDVLEEICQVVQGEIPVLIDSGIRRGSDIFKAIALGATAVLIGRPFMYGLALDG 345 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V A+ + KEF +M L GT ++ E+ Sbjct: 346 EEGVKRAMHQILKEFETTMRLAGTVKISEI 375 >gi|299751988|ref|XP_001830633.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] gi|298409625|gb|EAU91264.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] Length = 506 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 4/76 (5%) Query: 255 YCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKE 311 + NE Q GG+R D+LK++ LGA+ G+ PFL A S + V AA++ L+ E Sbjct: 390 FPNEKFQLFVDGGVRRATDVLKAVALGATAVGIGRPFLY-AFSSYGQEGVEAALQILKDE 448 Query: 312 FIVSMFLLGTKRVQEL 327 F +++ LLG ++++ Sbjct: 449 FEMNLRLLGAPTIKDI 464 >gi|119487411|ref|XP_001262498.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] gi|119410655|gb|EAW20601.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] Length = 500 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 320 IPWFKSITKMPIILKGVQC---VEDVLRAVEVGVDGVVLSNHGGRQLEFARSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ R + N+ + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPALRE------------RGWENKIEVYIDGGVRRATDILKALCLGAKGVGIGRPFLF-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ L+ E ++M L+G +++E LN +LI Sbjct: 424 MSTYGQPGVERAMQLLKDEMEMNMRLIGVSKIEE--LNPSLI 463 >gi|326430597|gb|EGD76167.1| cytochrome b2 [Salpingoeca sp. ATCC 50818] Length = 1056 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRK 310 AR + N+ + GG+R G D+LK++ LGA G+ P L A V + E + Sbjct: 944 ARGWQNKMEVYVDGGVRRGTDVLKALALGAKAVGIGRPTLYAMAGYGTAGVERVFEIVED 1003 Query: 311 EFIVSMFLLGTKRVQEL 327 E I+ M L+G +R+ +L Sbjct: 1004 EMIMGMRLMGAQRIADL 1020 >gi|115388051|ref|XP_001211531.1| predicted protein [Aspergillus terreus NIH2624] gi|114195615|gb|EAU37315.1| predicted protein [Aspergillus terreus NIH2624] Length = 361 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 31/174 (17%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S IA L ++P+ +K + S D L ++ G+ + ++ GG R Sbjct: 201 DWPSSIAWLRKITNLPIAIKGI---QSWEDAVLCMEYGVHPW-LSNHGG---------RQ 247 Query: 230 LESDIGIVFQDWGIPTPLSLEMA-RPYC----NEAQFIASGGLRNGVDILKSIILGASLG 284 LE G P+ + +A R +C + + I GG+ G DI+K++ LGA Sbjct: 248 LE----------GAPSAVDTLLAIRKHCPQVFDRCEVIVDGGITRGADIVKALALGARAV 297 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIR 335 GL FL V AI LR E +M LLG + +L Y++ ++++ Sbjct: 298 GLGRGFLYALAFGERGVSRAIRILRHEVETTMALLGVTNLGQLNPSYVDVSMLQ 351 >gi|302883003|ref|XP_003040406.1| hypothetical protein NECHADRAFT_44658 [Nectria haematococca mpVI 77-13-4] gi|256721285|gb|EEU34693.1| hypothetical protein NECHADRAFT_44658 [Nectria haematococca mpVI 77-13-4] Length = 462 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 16/170 (9%) Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + P+ TN + I S +P+++K V D+ +K G+ ++ GG Sbjct: 294 LDPSLTTNASLAWEDIPWFQSITKMPIVIKGVQ---RVEDVLTAVKYGVSAVILSNHGGR 350 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 E+ ++ +++ + ++ G+ + + M GG+R G D+LK++ L Sbjct: 351 QLEYAEAPIEVLAEVMPILRERGLDKKIEVYM------------DGGVRRGTDVLKALCL 398 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA G+ PFL A V A+ + E +M L+G + EL+ Sbjct: 399 GARGVGIGRPFLYAMAGYGQKGVEKAMRIFKDELERNMRLIGCNSIDELH 448 >gi|266622328|ref|ZP_06115263.1| glutamate synthase domain protein [Clostridium hathewayi DSM 13479] gi|288865950|gb|EFC98248.1| glutamate synthase domain protein [Clostridium hathewayi DSM 13479] Length = 462 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 37/257 (14%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L P+ IS M+ G M + + LA + AM G ++ + +A + + +Y Sbjct: 136 LDGPVYISHMSFG--AMSKEMKVALAKGSAMAGTAMCSGEGGILPEEKSAAYKY-IFEYV 192 Query: 115 P--HTVLISNL---GAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNPLQE-IIQPNG 164 P ++V NL A+++ G K H+ GA + + PL E +I P Sbjct: 193 PNRYSVTPDNLRESDAIEIKIGQGT-KPGMGGHLPGAKVTPEIAAIRNKPLGEDVISP-- 249 Query: 165 NTNFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + F D+ SK +A L A + + ++ G D+E + + + I GRGG Sbjct: 250 -SKFEDIRSKEDLRDLVAQLRMASEGRPIGIKIAAGKIEKDLEYCVFAEPDFITIDGRGG 308 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDIL 274 + + + RD S +PT +L AR Y +EA + +GGLR D Sbjct: 309 ATGASPKLVRDSTS----------VPTVYALSRARKYLDEAGADIDLVITGGLRVSSDFA 358 Query: 275 KSIILGASLGGLASPFL 291 K+I +GA +AS L Sbjct: 359 KAIAMGADAVAIASAGL 375 >gi|145530101|ref|XP_001450828.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418461|emb|CAK83431.1| unnamed protein product [Paramecium tetraurelia] Length = 368 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 22/154 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S VP++LK + CG D +L L+ G+ ++ GG + S ++ +I Sbjct: 225 IKWLRSITKVPIILKGIQCG---ADAKLALEHGVDAIWVSNHGGRQLDTVRSTVEMLPEI 281 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KP 293 + S+E+ Y + G+RNG D+ K + LGA + P + Sbjct: 282 --------VAAAGSVEV---YVD-------SGVRNGTDVYKCLALGAKCVFVGRPAIYST 323 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + + + L+ E + +M L+G +QE+ Sbjct: 324 AIGGREGLNKMFQILQSELVSTMQLMGVTSIQEI 357 >gi|302681071|ref|XP_003030217.1| hypothetical protein SCHCODRAFT_57415 [Schizophyllum commune H4-8] gi|300103908|gb|EFI95314.1| hypothetical protein SCHCODRAFT_57415 [Schizophyllum commune H4-8] Length = 504 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 14/157 (8%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + I S +PL+LK V C ++ + +G+ ++ GG S LE Sbjct: 316 ADIPWFKSITKMPLILKGVQCWEDAL---MAYDAGLAGVVLSNHGGRQLDF--SRSGLEV 370 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +V L+ + + NE Q GG+R D++K+I LGA+ G+ PF+ Sbjct: 371 LVEVVDN-------LTAKRGLKFPNEKFQLFVDGGVRRATDVIKAIALGANAVGVGRPFI 423 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + ++ V AI L EF +++ LLG ++++ Sbjct: 424 YAFSTYGAEGVDKAINILHDEFAMNLRLLGAPTIKDI 460 >gi|119180573|ref|XP_001241744.1| hypothetical protein CIMG_08907 [Coccidioides immitis RS] Length = 504 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLR 309 AR + N + GG+R DI+K++ LGA G+ PFL AM + V A++ L+ Sbjct: 381 ARGWENRIEVYIDGGIRRATDIIKALCLGAKGVGIGRPFLY-AMSTYGVPGVERAMQLLK 439 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E +++M LLG V +L + IR Sbjct: 440 DEMVMNMRLLGCTSVDQLTPDLLDIR 465 >gi|303321393|ref|XP_003070691.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110387|gb|EER28546.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 504 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLR 309 AR + N + GG+R DI+K++ LGA G+ PFL AM + V A++ L+ Sbjct: 381 ARGWENRIEVYIDGGIRRATDIIKALCLGAKGVGIGRPFLY-AMSTYGVPGVERAMQLLK 439 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E +++M LLG V +L + IR Sbjct: 440 DEMVMNMRLLGCTSVDQLTPDLLDIR 465 >gi|320035803|gb|EFW17743.1| FMN-dependent dehydrogenase [Coccidioides posadasii str. Silveira] Length = 504 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLR 309 AR + N + GG+R DI+K++ LGA G+ PFL AM + V A++ L+ Sbjct: 381 ARGWENRIEVYIDGGIRRATDIIKALCLGAKGVGIGRPFLY-AMSTYGVPGVERAMQLLK 439 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E +++M LLG V +L + IR Sbjct: 440 DEMVMNMRLLGCTSVDQLTPDLLDIR 465 >gi|118370968|ref|XP_001018684.1| FMN-dependent dehydrogenase family protein [Tetrahymena thermophila] gi|89300451|gb|EAR98439.1| FMN-dependent dehydrogenase family protein [Tetrahymena thermophila SB210] Length = 371 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAA 304 P + + Y N + GG+R G D+LK + LGA + P L A + V+ Sbjct: 274 PEVMHAIKDYRNTVEVYVDGGIRRGTDVLKCLALGAKCVFIGRPLLFSLAAEGEQGVLKM 333 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 + KE V+M LLG ++ +L L Sbjct: 334 FQLFEKEMKVAMMLLGAGKISDLGLK 359 >gi|302882321|ref|XP_003040071.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256720938|gb|EEU34358.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 493 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DILK++ LGA G+ PFL AM + V A++ L+ E ++M L+G Sbjct: 390 GGVRRGTDILKALCLGARGVGIGRPFLY-AMSAYGEPGVDRAMQLLKDELEMNMRLIGCN 448 Query: 323 RVQELY 328 R+ EL+ Sbjct: 449 RIDELH 454 >gi|258578229|ref|XP_002543296.1| cytochrome b2 [Uncinocarpus reesii 1704] gi|237903562|gb|EEP77963.1| cytochrome b2 [Uncinocarpus reesii 1704] Length = 523 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLR 309 AR + N+ + GG+R DI+K++ LGA G+ PFL AM + V A++ L+ Sbjct: 400 ARGWENKIEVFVDGGVRRATDIIKALCLGAKGVGIGRPFLY-AMSTYGVPGVERAMQLLK 458 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E ++M LLG V +L + IR Sbjct: 459 DEMTMNMRLLGCTSVDQLTPDLLDIR 484 >gi|70981939|ref|XP_746498.1| mitochondrial cytochrome b2 [Aspergillus fumigatus Af293] gi|66844121|gb|EAL84460.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus Af293] Length = 500 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 320 IPWFQSITKMPIILKGVQC---VEDVLRAVEMGVDGVVLSNHGGRQLEFARSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ R + N+ + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPALRE------------RGWENKIEVYIDGGVRRATDILKALCLGAKGVGIGRPFLF-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ L+ E ++M L+G +++E LN +LI Sbjct: 424 MSAYGQPGVERAMQLLKDEMEMNMRLIGVSKIEE--LNPSLI 463 >gi|146413206|ref|XP_001482574.1| hypothetical protein PGUG_05594 [Meyerozyma guilliermondii ATCC 6260] Length = 547 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+R D+LK+I LGA G+ PFL AM + D VV A + L+ E I++M LLG Sbjct: 479 GGVRRASDVLKAIALGAKGVGIGRPFLY-AMSTYGVDGVVRAFQILKDEMIMNMRLLGAT 537 Query: 323 RVQEL 327 + +L Sbjct: 538 TMDQL 542 >gi|190348942|gb|EDK41496.2| hypothetical protein PGUG_05594 [Meyerozyma guilliermondii ATCC 6260] Length = 547 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+R D+LK+I LGA G+ PFL AM + D VV A + L+ E I++M LLG Sbjct: 479 GGVRRASDVLKAIALGAKGVGIGRPFLY-AMSTYGVDGVVRAFQILKDEMIMNMRLLGAT 537 Query: 323 RVQEL 327 + +L Sbjct: 538 TMDQL 542 >gi|325293675|ref|YP_004279539.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] gi|325061528|gb|ADY65219.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] Length = 377 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL D V A+E +RKE +SM L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGADGKQGVTTALEIIRKEMDISMALCGKRL 367 Query: 324 VQEL 327 + ++ Sbjct: 368 ITDV 371 >gi|212538635|ref|XP_002149473.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210069215|gb|EEA23306.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 394 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC E + GG+R G D++K+I LGA G+ S F Sbjct: 274 DTAPPSIYTLLEIRKYCPEVFDKVDVLVDGGIRRGTDVVKAICLGAKGVGIGRSVFWGLG 333 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 V IE + E M LLG + V +L ++NT++I Q Sbjct: 334 AGGVRGVERTIEIMADEIRTCMRLLGVRNVADLGLQHVNTSIIEQQ 379 >gi|67537952|ref|XP_662750.1| hypothetical protein AN5146.2 [Aspergillus nidulans FGSC A4] gi|40743137|gb|EAA62327.1| hypothetical protein AN5146.2 [Aspergillus nidulans FGSC A4] gi|259484595|tpe|CBF80953.1| TPA: mitochondrial cytochrome b2, putative (AFU_orthologue; AFUA_1G07200) [Aspergillus nidulans FGSC A4] Length = 475 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 D P +L R YC E + + GG+R G D++K++ LGA G+ P L Sbjct: 351 DTAPPAVHTLLEIRKYCPEVFDKLEVLVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLG 410 Query: 296 DSSDAVVA-AIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 A V ++ L E +M LLG +RV++L ++NT ++ Q Sbjct: 411 AGGVAGVKRTLQILADETSTAMRLLGCERVEQLGPHHVNTRVVEQQ 456 >gi|159122277|gb|EDP47399.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus A1163] Length = 500 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 320 IPWFQSITKMPIILKGVQC---VEDVLRAVEMGVDGVVLSNHGGRQLEFAPSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ R + N+ + GG+R DILK++ LGA G+ PFL A Sbjct: 377 MPALRE------------RGWENKIEVYIDGGVRRATDILKALCLGAKGVGIGRPFLF-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ L+ E ++M L+G +++E LN +LI Sbjct: 424 MSAYGQPGVERAMQLLKDEMEMNMRLIGVSKIEE--LNPSLI 463 >gi|268554654|ref|XP_002635314.1| Hypothetical protein CBG01477 [Caenorhabditis briggsae] gi|187038197|emb|CAP22771.1| hypothetical protein CBG_01477 [Caenorhabditis briggsae AF16] Length = 372 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+RNG DI K++ LGA + P L A S VVA + L+KEF+ SM L G + Sbjct: 296 GGVRNGRDIFKAVALGARGVFVGRPVLWGLATSGSSGVVAVLGILQKEFLHSMQLSGYRS 355 Query: 324 VQELYLNTALIRH 336 ++EL + + H Sbjct: 356 IEELQKDDRAVVH 368 >gi|325968795|ref|YP_004244987.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta moutnovskia 768-28] gi|323707998|gb|ADY01485.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta moutnovskia 768-28] Length = 460 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 82/356 (23%), Positives = 136/356 (38%), Gaps = 83/356 (23%) Query: 36 LPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ 95 L E +F +V+ G K+S P+++ SM G+ + R + ++A AA K + M +G Sbjct: 98 LREPTFMDVNLEDSLGGFKVSMPIVVGSM--GSTTVASRFSLDIARAAAKAGIVMGIGE- 154 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD-FG----VQKAHQAVHVL------ 144 + A++ + R H L A N D +G Q A L Sbjct: 155 -----NVAAVRGYSRRYTRGHPSFKERLMAYLTNVDKYGGVIIQQNVEDAYDELWNRVYS 209 Query: 145 ----------GADGLFLHLN-------------PLQEIIQPNGNTNFADLSSKI-ALLSS 180 G G + + P +E I+ +F KI A + Sbjct: 210 DKDVEPYIEEGLIGFEIKMGQGAKPGLGGVIKIPKEEAIRLKAKYHFEIDPEKIRAKYIT 269 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI---- 236 VP G + DI L+ IR+ A W ++ +RD++ I I Sbjct: 270 RYSVP--------GTYTEDI---LRGMIRFMKTAYPRARIWIKLGPYRDVDRAISIAHEE 318 Query: 237 --------------------VFQDWGIPTPLSLEM---ARPY-CNEAQFIASGGLRNGVD 272 +D G PT ++L+ AR + +G L NG Sbjct: 319 GAHAVVIDGKEGGTGMAPSVAMKDLGYPTIVALKKIHDARKLGITNISLLLAGRLYNGSH 378 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++K+I LGAS +A PFL AM + V+ IE++++E + + LG ++E+ Sbjct: 379 VVKAIALGASGAYMARPFLMAAMVKGERGVLNYIEAVKEEMQMLISALGKYGIKEV 434 >gi|298291899|ref|YP_003693838.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] gi|296928410|gb|ADH89219.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] Length = 421 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSS 298 D+ + +L R E + GG+R G D+LK++ LGA L PFL A + + Sbjct: 321 DYALAPIRALPELRAEAQEMTVMLDGGIRRGTDVLKALALGADFVFLGRPFLYAASLGGT 380 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ AI L +E M L+G + + EL Sbjct: 381 EGVLHAIRLLSEEIHRDMALMGLRTLDEL 409 >gi|212538281|ref|XP_002149296.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] gi|210069038|gb|EEA23129.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] Length = 498 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L R YC E + + GG+R G D++K++ LGA G+ P L Sbjct: 377 DTAPPAVHTLLEIRKYCPEVFDKIEVLVDGGIRRGTDVVKALCLGARAVGIGRPALWGLG 436 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E M LLG ++V +L Y+N+ ++ Q Sbjct: 437 AGGIEGVHRTLEILADETKTCMQLLGVEKVSDLGPEYINSRIVEQQ 482 >gi|313619030|gb|EFR90851.1| isopentenyl-diphosphate delta-isomerase [Listeria innocua FSL S4-378] Length = 136 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 7/110 (6%) Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++IE+ R + + DWGI T +L +M + ++ASGG+RN +DI+K++ LG Sbjct: 1 AQIENDRRRDQAYNFLL-DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALG 59 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLR--KEFIVSMFLLG-TKRVQEL 327 A G+A + D V IE L KE + +F+L K + EL Sbjct: 60 ADSVGMAGQIIYSL--KKDGVSKTIEKLELWKEQLRGLFVLANAKNIAEL 107 >gi|238500638|ref|XP_002381553.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] gi|220691790|gb|EED48137.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] Length = 369 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 63/344 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS-----SMTG-----GN 68 + N F + L+ R L ++S V+ + G+ ++FPL +S +M Sbjct: 37 VRENSSAFQKYRLLPRVLRDVS--RVNTEIPLWGRNITFPLCVSPAGIQAMAHPDGELAT 94 Query: 69 NKMIERINRNLAIAA-EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI-----SN 122 ++ ++N N+ +++ V V + + H+ ++ + ++ +I + Sbjct: 95 SRACAKMNVNMGVSSFSNHSVEDVVAAGMAIGPVHHVMQLYSMKDRKTEEGIIRRAEAAG 154 Query: 123 LGAVQLNYD---FGVQKAHQAVHVLGADGL---FLHLNPLQEIIQPNGNTNFADLSS--- 173 A+ L D GV+ + GL L+ +P ++I Q + + F +S Sbjct: 155 CKAIFLTADSPVLGVRYNEWRNGFQPSPGLGYPMLNRSP-EDIAQQSHDDGFNSFNSDSH 213 Query: 174 ----KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 +I+ L S ++ + +K V L+ D+EL ++ I+ GG R Sbjct: 214 SWAKEISWLRSVTNMEIWIKGV---LTPEDVELAVEYKCDGVIISNHGG---------RQ 261 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLG 284 L+ TP +++ A P C +A + GG+R+GVDI K++ LGA Sbjct: 262 LDE------------TPATID-ALPACAQAARGRIRIHVDGGIRSGVDIFKALALGAECC 308 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P L A + V + L ++F M L+G + E+ Sbjct: 309 WVGRPALWGLAYNGEQGVELMLRILYEDFKRCMQLVGCTSISEI 352 >gi|78355797|ref|YP_387246.1| FMN-dependent family dehydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218202|gb|ABB37551.1| dehydrogenase, FMN-dependent family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 340 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESL 308 E+A +A GG+R+G D++K + LGA + PF A+ ++ V A +E+L Sbjct: 254 EIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVGGQAEGVAAYLEAL 313 Query: 309 RKEFIVSMFLLGTKRVQE 326 R + + +M L G + VQE Sbjct: 314 RGQLVQAMVLTGCRSVQE 331 >gi|156065351|ref|XP_001598597.1| hypothetical protein SS1G_00686 [Sclerotinia sclerotiorum 1980] gi|154691545|gb|EDN91283.1| hypothetical protein SS1G_00686 [Sclerotinia sclerotiorum 1980 UF-70] Length = 497 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 26/170 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 S IA L +P+LLK V +S+D ++ L GI I+ GG R L++ Sbjct: 328 SDIAWLRRCTKLPILLKGV---QTSLDAKMALDHGIDGILISNHGG---------RSLDT 375 Query: 233 DIGIVFQDWGIPTPLSLEM---ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + + LEM A + + GG+ G DI K++ LGA G+ Sbjct: 376 SPASIL--------VLLEMQKNAPEVFDGMEVFIDGGIMRGTDIFKALCLGAKAVGIGRG 427 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 FL + V IE L+ E +M ++G V +++ LNT + H Sbjct: 428 FLFALGWGREGVEKYIEILKDELETTMRMMGVTDVSQVHPGMLNTRAVDH 477 >gi|83770006|dbj|BAE60141.1| unnamed protein product [Aspergillus oryzae] Length = 347 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 58/343 (16%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + + R L I+ D++D S E G K++FPL S ++ + + +A Sbjct: 9 NEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKLAHPDGEVAA 63 Query: 82 --AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K V M + S +S+++ P+ + + L L +++A + Sbjct: 64 SRAAAKYNVCMGLSS----YSNYSLEDVAAQGSGNPYAMQMCVLKDRSLTLQL-LERAEK 118 Query: 140 AVHVLGADGLFLHLN-PL--QEIIQPNGNTNFADLSSKIALLSSAMD------------- 183 A G LFL ++ PL + + + N + S +LS +D Sbjct: 119 A----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNRTDYDPSLDW 174 Query: 184 ---VPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESHRDLESDI---- 234 +P L K +++ LK G+ ++ + + + D+E I Sbjct: 175 ETTIPWLRKHT-------KLQIWLKGGVYSLFYKSTINHKLTLPAVYTPEDVELAIQYGV 227 Query: 235 -GIVFQDWG----IPTPLSLEMARPYCNEAQ----FIASGGLRNGVDILKSIILGASLGG 285 G++ + G P +L+ R AQ GG+R G DI K++ LGAS Sbjct: 228 DGVIISNHGGRQLDGVPATLDALRECAPVAQGRIPLAIDGGIRRGSDIFKALALGASHCF 287 Query: 286 LAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P A + + V A++ L +EF ++M L G + V+E+ Sbjct: 288 VGRIPIWGLAWNGQEGVELAVKILLQEFRITMALAGCRSVKEI 330 >gi|302872799|ref|YP_003841435.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor obsidiansis OB47] gi|302575658|gb|ADL43449.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor obsidiansis OB47] Length = 344 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 46/298 (15%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN--LAIAAEKTKVAMAVGSQRVMFS 100 E D VE GKKL P+L + +TG + M RI+ + + +K A +G M Sbjct: 67 EPDICVEMFGKKLDMPILAAPITGSSYNMGGRISEEDFIQMVISGSKEAGTIG----MCG 122 Query: 101 DHNAIKSFE-----LRQYAPHTVLI----SNLGAVQLNYDFGVQKAHQA-VHVLGADGLF 150 D +E +R H + I SN ++ +++A A +G D Sbjct: 123 DGGDPVFYESGLKAIRNENGHGIAIIKPRSNDQIIKR-----IKEAEDAGALAVGIDIDG 177 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 L + + QP G +L AL+SS+ +PL+LK + ++ + E+ L+ G Sbjct: 178 AGLITMALMGQPVGPKTKEELK---ALISSS-SLPLILKGI---MTEDEAEIALEVGASA 230 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG RI H +++ +P +A + A GG+R+G Sbjct: 231 IVVSNHGG----RILDHTPGVAEV--------LP-----RIAEKVKGKILIFADGGVRSG 273 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 VD+LK + LGA + P + A + V +E + +E +M L G K ++ + Sbjct: 274 VDVLKYLALGADAVLVGRPIIHAAFGGGKEGVKLILEKIAQELKQAMILTGCKDIKSI 331 >gi|154272756|ref|XP_001537230.1| cytochrome b2, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150415742|gb|EDN11086.1| cytochrome b2, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 513 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + N + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQNRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGMPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G + +L Sbjct: 451 EMVMNMRLIGCSNIGQL 467 >gi|169782195|ref|XP_001825560.1| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] gi|83774303|dbj|BAE64427.1| unnamed protein product [Aspergillus oryzae] Length = 369 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 63/344 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM----------TGGN 68 + N F + L+ R L ++S V+ + G+ ++FPL +S Sbjct: 37 VRENSSAFQKYRLLPRVLRDVS--RVNTEIPLWGRNIAFPLCVSPAGIQAMAHPDGELAT 94 Query: 69 NKMIERINRNLAIAA-EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI-----SN 122 ++ ++N N+ +++ V V + + H+ ++ + ++ +I + Sbjct: 95 SRACAKMNVNMGVSSFSNHSVEDVVAAGMAIGPVHHVMQLYSMKDRKTEEGIIRRAEAAG 154 Query: 123 LGAVQLNYD---FGVQKAHQAVHVLGADGL---FLHLNPLQEIIQPNGNTNFADLSS--- 173 A+ L D GV+ + GL L+ +P ++I Q + + F +S Sbjct: 155 CKAIFLTADSPVLGVRYNEWRNGFQPSPGLGYPMLNRSP-EDIAQQSHDDGFNSFNSDSH 213 Query: 174 ----KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 +I+ L S ++ + +K V L+ D+EL ++ I+ GG R Sbjct: 214 SWAKEISWLRSVTNMEIWIKGV---LTPEDVELAVEYKCDGVVISNHGG---------RQ 261 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLG 284 L+ TP +++ A P C +A + GG+R+GVDI K++ LGA Sbjct: 262 LDE------------TPATID-ALPPCAQAARGRIRIHVDGGIRSGVDIFKALALGAECC 308 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P L A + V + L ++F M L+G + E+ Sbjct: 309 WVGRPALWGLAYNGEQGVELMLRILYEDFKRCMQLVGCTSISEI 352 >gi|304317475|ref|YP_003852620.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778977|gb|ADL69536.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 338 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 78/331 (23%), Positives = 128/331 (38%), Gaps = 65/331 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GN--NKMIERIN 76 N K D W + + L ++ + D S FLG K+ P+ + MTG GN + ER Sbjct: 47 ENIKALDRWKVKLKTLHDVL--KPDISTSFLGYKVKMPIFAAPMTGLKGNAGGYLSERDY 104 Query: 77 RNLAIAAEK---TKVAMAVGSQRVMF-SDHNAIKSFELRQY---APHTV--------LIS 121 +A A K T + + M+ + +AIK+ + P TV + Sbjct: 105 DTMAAEACKNVGTIFMSGDANDKDMYPAGIDAIKTTSVLGIPFSKPRTVDEIIEKARIAK 164 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 GA+ D V GA GL + + Q + P ++ I L Sbjct: 165 EAGAIAFGVD-----------VDGA-GLIMMIRSGQ-FVGPKSRKEIEEIVKNIEL---- 207 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PL+LK + ++ + E+ +SG + ++ GG E D+ DI Sbjct: 208 ---PLILKGI---MTPEEAEIAAESGAKAIVVSNHGGRVLDFTEGTADVLPDI------- 254 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 A+ + + + GG+R G+D+LK + LGA + P + A +A Sbjct: 255 ----------AKAVGGKIEILVDGGVRTGIDVLKMLSLGAKAVLIGRPIMIAAHGGGREA 304 Query: 301 VVAAIESLRKEFIVSMFLLGT---KRVQELY 328 + + + E +M L G K V ELY Sbjct: 305 IEFYFKKVSDELYQAMILTGCKDLKNVPELY 335 >gi|85105154|ref|XP_961900.1| cytochrome b2, mitochondrial precursor [Neurospora crassa OR74A] gi|28923484|gb|EAA32664.1| cytochrome b2, mitochondrial precursor [Neurospora crassa OR74A] Length = 501 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V D+ +++G++ ++ GG ++E R S I Sbjct: 319 IPWFQSVTKMPIILKGVQ---RVEDVIKAVEAGVQGVVLSNHGG---RQLEFAR---SGI 369 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ + + L LE ++ + GG+R DILK++ LGA G+ PFL A Sbjct: 370 EVLAETMPVLRELGLE------DKIEVYIDGGIRRATDILKALCLGAKGVGIGRPFLY-A 422 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + D V A++ L+ E ++M L+G ++++L Sbjct: 423 MSAYGFDGVDRAMQLLKDEMEMNMRLIGATKIEDL 457 >gi|224047440|ref|XP_002199246.1| PREDICTED: similar to hydroxyacid oxidase 1 [Taeniopygia guttata] Length = 370 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P L A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFIGRPILWGLAYQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + ++ L++EF ++M L G RV+E+ T + RHQ Sbjct: 327 EGAKEVLQMLKEEFRLAMALTGCWRVEEIG-RTLIRRHQ 364 >gi|325126506|gb|ADY85836.1| lactate oxidase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 192 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 21/149 (14%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A +P+++K V C + D+E+ L +G + GG + D+ Sbjct: 27 NAKGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGGREIDGAPATIDV--------- 74 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 P +E C I GG+R G + K++ LGA L G+ P+L A+ Sbjct: 75 -----LPEVVEAVNGRC---PVIFDGGVRRGSHVFKALALGADLVGIGRPYLYGLALGGP 126 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + I L E + M L G K ++++ Sbjct: 127 HGVASIINELNDELKIDMQLTGCKTIEDV 155 >gi|149920957|ref|ZP_01909418.1| glutamate synthase domain protein [Plesiocystis pacifica SIR-1] gi|149818229|gb|EDM77684.1| glutamate synthase domain protein [Plesiocystis pacifica SIR-1] Length = 411 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 44/276 (15%) Query: 46 PSVEFLGKK---LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 P+ E G K L+ PL+I+ M+ G+ + LA AE A+ G ++ D Sbjct: 63 PTAERPGAKPLELTIPLMIADMSFGS--LSREAKTALAKGAELAGAAICSGEGGIL-KDE 119 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-----NPL- 156 A S L Q + + G Q H G HL +P+ Sbjct: 120 KAQSSRYLYQLGTGEFGYETMAGEERPRWHGAQAFHFKGGQGAKTGTGGHLPGAKVSPMI 179 Query: 157 ---------QEIIQP---NGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELG 203 ++II P + D +++ + AM DVP+ K + DI+ Sbjct: 180 AKTRGKEKGKDIISPPTFETMRSVEDFQARVETVKEAMGDVPIGFK-LSANRIEDDIDFA 238 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW-GIPTPLSLEMARPYCNE---- 258 L+ G Y + GRGG + + I+F+D +PT ++ AR Y + Sbjct: 239 LRVGADYIILDGRGGATGAAP-----------ILFRDHISVPTMAAIVRARRYIDAHPKG 287 Query: 259 --AQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + IA+GGLR D +K++ LGA LA+ L+ Sbjct: 288 AGVKLIATGGLRVPTDFVKAMALGADGVALANTALQ 323 >gi|294657054|ref|XP_459365.2| DEHA2E00836p [Debaryomyces hansenii CBS767] gi|199432414|emb|CAG87560.2| DEHA2E00836p [Debaryomyces hansenii] Length = 615 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 NE + GG+R G D++K++ LGA GL FL + VV A E L+ E Sbjct: 507 NEIEIYVDGGIRRGSDVIKALCLGAKGVGLGRSFLYANSAYGKKGVVKACELLKDEIARD 566 Query: 316 MFLLGTKRVQEL 327 M LLG ++++L Sbjct: 567 MKLLGVSKLEDL 578 >gi|190347534|gb|EDK39821.2| hypothetical protein PGUG_03919 [Meyerozyma guilliermondii ATCC 6260] Length = 273 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%) Query: 163 NGNTNF-ADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 NG T++ ++LS K I + + ++P+ LK + G D+ L + GI ++ GG Sbjct: 79 NGKTDYPSNLSWKHIERIRACTNIPIALKGIQRG---EDVVLAAEKGISGVVLSNHGGRQ 135 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++ S+ + ++ G+ N+ + GG+R G DI+K++ LG Sbjct: 136 LDFSRPPLEVLSEAKQMLKERGLD------------NKIEIYIDGGIRRGSDIVKALCLG 183 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL PFL A + V+ + L E +M LLG +++L Sbjct: 184 ATGVGLGRPFLYAMAGYGEEGVLKLVSLLEGEVKNNMKLLGVDNIKDL 231 >gi|226225654|ref|YP_002759760.1| glycolate oxidase [Gemmatimonas aurantiaca T-27] gi|226088845|dbj|BAH37290.1| glycolate oxidase [Gemmatimonas aurantiaca T-27] Length = 358 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 144/350 (41%), Gaps = 82/350 (23%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N++ ++ L R L +++ E+D SV LG+ LS P+L++ +K+I + +A Sbjct: 40 NERDWNSIRLRQRVLVDVA--ELDTSVSLLGRTLSHPILLAPT--AYHKLIH-ADGEVAT 94 Query: 82 AAEKTKVAMAVGSQRVMFSDHNA-IKSFELRQYAPHTVLISNLGAVQLNYDFG---VQKA 137 A + A G+ +M S N+ I+ AP + VQ + +F VQ+ Sbjct: 95 A----RGASEAGAPMIMSSFSNSPIEDVARATTAPFWFQLY----VQPDREFTKALVQRV 146 Query: 138 HQA----------VHVLGA------------DGLF-LHLNPLQEIIQ------PNGNTNF 168 A VLGA DGL +L + ++ P G Sbjct: 147 EAAGCEALCLTVDTPVLGARYRETRTGFHLPDGLTRANLEGMTQVAADAAHRPPEGAIYS 206 Query: 169 ADLSSK-----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 A L + + L S VP+LLK + + D L ++ G ++ G Sbjct: 207 AVLEPRLTWKDVEWLRSIATVPVLLKGI---MDPDDARLAVQHGASGVIVSNHGA----- 258 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSII 278 R+L++ +P S MA P+ +A + GG+R G D+LK++ Sbjct: 259 ----RNLDT----------VP---STAMALPHVVDAIDGRVPVLVDGGIRRGTDVLKALA 301 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGAS + P+L A+D + V + +LR E ++M L G V + Sbjct: 302 LGASSVLIGRPYLYGLAVDGAAGVSRVVRTLRTELEMAMALTGRTSVSAI 351 >gi|302389207|ref|YP_003825028.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosediminibacter oceani DSM 16646] gi|302199835|gb|ADL07405.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosediminibacter oceani DSM 16646] Length = 340 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 46/296 (15%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINR----NLAIAAEKT--KVAMAVGSQRVM 98 D +VE G+KLS P+L + +TG M + + I+ K + M + Sbjct: 69 DITVELFGRKLSMPILAAPITGSEYNMGGAVPEEEFIQMVISGSKAAGTIGMCGDGGNPL 128 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 F D + +K+ E + H + + D ++ A +A ++GA + + ++ Sbjct: 129 FYD-SGLKAIE--KEGGHGIAVMK----PRENDVALRMAERA-KIIGAVAVGMDVDGAGL 180 Query: 159 II-----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLKSGIRYFD 212 I QP G +L I S + VP +LK G+ ++D +L + G + Sbjct: 181 ITMALMGQPVGPKTREELEEII----SKVGVPFILK----GIMTVDEAQLAYEVGAKAIV 232 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG R L+S G+ I L + +A GG+R+GVD Sbjct: 233 VSNHGG---------RILDSTPGVAEVLPAIAEKLK--------GKITILADGGVRSGVD 275 Query: 273 ILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +LK + LGA + P + A ++ V +E++ KE +M L G + + Sbjct: 276 VLKYLALGADAVLVGRPVIIGAYGGGAEGVKVVLETMAKELKQAMILTGCNDIASI 331 >gi|239832568|ref|ZP_04680897.1| L-lactate dehydrogenase [cytochrome] [Ochrobactrum intermedium LMG 3301] gi|239824835|gb|EEQ96403.1| L-lactate dehydrogenase [cytochrome] [Ochrobactrum intermedium LMG 3301] Length = 381 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM D Sbjct: 285 PSSISMLQPIVDAVGDAIEVHVDGGIRSGQDVLKARALGAQGVFIGRPFLYGLGAM-GKD 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE V+M L G + + E+ Sbjct: 344 GVTLALEIIRKELDVTMALCGKRDINEI 371 >gi|226288370|gb|EEH43882.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 513 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQDRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G +++L Sbjct: 451 ELVMNMRLIGCSSIEQL 467 >gi|302908375|ref|XP_003049853.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730789|gb|EEU44140.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 369 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L D+P+++K +G S+ D +L +K G ++ GG R L+ Sbjct: 223 LQKMTDLPIIIKGIG---SAKDAQLAVKHGAPAIILSNHGG---------RQLDGSPS-- 268 Query: 238 FQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G+ L + P + + A GG+R G D+LK + LG GL PF+ + Sbjct: 269 ----GLEVALEIHEESPEVFKKIEVYADGGVRYGADVLKLLSLGVKAVGLGRPFMYANVF 324 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V I+ L+ E + LG + ++ Sbjct: 325 GVDGVKKVIDILKHEIAIDAGNLGVPDIHKI 355 >gi|295672097|ref|XP_002796595.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226283575|gb|EEH39141.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 513 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQDRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G +++L Sbjct: 451 ELVMNMRLIGCSSIEQL 467 >gi|225683159|gb|EEH21443.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 513 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQDRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G +++L Sbjct: 451 ELVMNMRLIGCSSIEQL 467 >gi|156537674|ref|XP_001607878.1| PREDICTED: similar to ENSANGP00000018221 [Nasonia vitripennis] Length = 365 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 25/166 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + ++S +P+++K V L++ D L +K G ++ G R L+ Sbjct: 215 VEWMTSVTKLPIVVKGV---LTAEDALLAVKHGASAILVSNHGA---------RQLD--- 259 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G P P+ E+ + ++ + GG+R G+D+ K++ +GA + + P L Sbjct: 260 -------GTPAPIEALPEVVKAVGDKVEVYVDGGVRQGIDVFKALAIGARMVFIGRPMLW 312 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + A +E +R+E + L G V+++ + L+ H+ Sbjct: 313 GLACGGEEGARAVLEIMRREIDETFALAGCSNVEQISRDKDLVVHK 358 >gi|254579104|ref|XP_002495538.1| ZYRO0B13728p [Zygosaccharomyces rouxii] gi|238938428|emb|CAR26605.1| ZYRO0B13728p [Zygosaccharomyces rouxii] Length = 598 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%) Query: 249 LEMARPYCNEAQF-----IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 L A+P E F GG+R G D++K++ LGA GL PFL ++ + V Sbjct: 466 LAEAQPILKERNFENFDVFVDGGIRRGTDVVKALCLGAKGVGLGRPFLYANSVYGKEGVQ 525 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 AI+ L E ++M LLG +++L ++T+ I+ + Sbjct: 526 KAIDILNFEVEMTMRLLGVTSIKQLGPELIDTSCIKSR 563 >gi|319997180|gb|ADV91184.1| mitochondrial cytochrome b2-like protein 2 [Karlodinium micrum] Length = 374 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 17/154 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A + D+P++LK V G D L + G ++ GG R H DI Sbjct: 212 LAWIRKITDLPIILKGVQSG---EDAVLAAQHGCAGVLVSNHGG----RQLDHARPTFDI 264 Query: 235 GI-VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + V QD LE A ++ + GG+R G D+ K++ LGA G+ P + Sbjct: 265 LVEVMQD--------LEEA-DLKDKIEVYLDGGVRRGTDVYKALALGAKAVGIGRPCMYA 315 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V ++ +R EF+++M L+G + ++ Sbjct: 316 LTFGQDGVEKCLQLIRDEFMLTMKLMGVTSIDQI 349 >gi|58266812|ref|XP_570562.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110826|ref|XP_775877.1| hypothetical protein CNBD2850 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258543|gb|EAL21230.1| hypothetical protein CNBD2850 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226795|gb|AAW43255.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 552 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 75/336 (22%), Positives = 136/336 (40%), Gaps = 56/336 (16%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS----------------SMT 65 N+K FD + R L + + + EF+G K + P+ IS + Sbjct: 220 NEKAFDRYFFRPRILRDATTGSTE--TEFMGMKTTMPVFISPAAMAKLGNPLGEVNLTRG 277 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLISNLG 124 G +++ I+ N + + ++ A G Q VMF + N ++ + T L +N Sbjct: 278 AGACGIVQGISINASCSLDEIMTARKEG-QPVMFQIYLNKDRAASIALLKRVTALGAN-- 334 Query: 125 AVQLNYDFGVQ---------KAHQAVHVLGADGLFLHLNPL--QEIIQPNGNTNFADLSS 173 A+ D + KAH A + G +PL + I +TN Sbjct: 335 AIIFTVDTAWRSKRTMDVRAKAHVAPPP-SSSGQQKSASPLGVSQAISGYQDTNLT--WK 391 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I + ++P+++K V C D++L K+G++ ++ GG + DL + Sbjct: 392 DIDFIREHTNLPIIVKGVQC---VEDVDLCAKAGVQGVILSNHGGRQCDYAPAPIDLLYE 448 Query: 234 IGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 L RP ++ + + GG+R+G D++K+I LGA G+ FL Sbjct: 449 ---------------LRCKRPDLFDKIEVMMDGGVRSGADVVKAIALGAKAVGIGRSFLY 493 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + L +E +M +G R+++L Sbjct: 494 ANGTHGEEGVVRLCQILAEEITNTMRNIGAPRLEDL 529 >gi|254281176|ref|NP_062418.3| hydroxyacid oxidase 2 [Mus musculus] gi|13124286|sp|Q9NYQ2|HAOX2_MOUSE RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Medium chain alpha-hydroxy acid oxidase; AltName: Full=Medium-chain L-2-hydroxy acid oxidase gi|7208440|gb|AAF40201.1|AF231918_1 medium-chain 2-hydroxy acid oxidase HAOX3 [Homo sapiens] gi|8926328|gb|AAF81795.1|AF272947_1 long-chain L-2-hydroxy acid oxidase [Mus musculus] gi|26347607|dbj|BAC37452.1| unnamed protein product [Mus musculus] gi|123121642|emb|CAM26917.1| hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] gi|148707026|gb|EDL38973.1| hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] Length = 353 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ ++ + DL LL S +P++LK + L+ D EL +K IR ++ GG Sbjct: 201 PSSSSCWNDLP----LLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGG--- 250 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSI 277 R L+ P S++ R + + GG+R G D+LK++ Sbjct: 251 ------RQLDE------------VPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKAL 292 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P + A D V ++ L++E M L G + V E+ Sbjct: 293 ALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI 343 >gi|12858515|dbj|BAB31343.1| unnamed protein product [Mus musculus] Length = 353 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ ++ + DL LL S +P++LK + L+ D EL +K IR ++ GG Sbjct: 201 PSSSSCWNDLP----LLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGG--- 250 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSI 277 R L+ P S++ R + + GG+R G D+LK++ Sbjct: 251 ------RQLDE------------VPASIDALRKVVAAVNGKIEVYMDGGVRTGNDVLKAL 292 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P + A D V ++ L++E M L G + V E+ Sbjct: 293 ALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI 343 >gi|148234656|ref|NP_001086109.1| hydroxyacid oxidase 2 (long chain) [Xenopus laevis] gi|49257598|gb|AAH74200.1| MGC82107 protein [Xenopus laevis] Length = 356 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L+ D EL + G++ ++ GG R L+ ++ Sbjct: 213 ICWLRSVTKLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGG---------RQLDGEL 260 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + LS E+A + GG+R G D+LK+I LGA L P + Sbjct: 261 ATI-------DALS-EIAEVVQGRIEVYLDGGIRTGSDVLKAIALGAKCVFLGRPIVWGL 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V ++ L EF +SM L G + V E+ N Sbjct: 313 TYKGEEGVKGILQILTDEFRLSMALSGCRNVSEVNRN 349 >gi|150951047|ref|XP_001387298.2| cytochrome b2, mitochondrial precursor [Scheffersomyces stipitis CBS 6054] gi|149388277|gb|EAZ63275.2| cytochrome b2, mitochondrial precursor [Pichia stipitis CBS 6054] Length = 581 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I A D+P+++K V D+ L +++ I ++ GG + ++ +D+ Sbjct: 407 IRKFKQATDIPIVIKGVQ---RVDDVLLAIENNIDGVVLSNHGGRQLDFSRAPIEVLADV 463 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 V + + N+ + GG+R G D++K++ LGA GL FL Sbjct: 464 NKVLKQKNLE------------NKIEIYIDGGVRRGSDVIKALCLGAKGVGLGRAFLYAN 511 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV AI L++E + M LLG + +L Sbjct: 512 SCYGEKGVVKAIRMLKEEMTLDMKLLGVSNISQL 545 >gi|123233741|emb|CAM23979.1| phosphodiesterase 11A [Mus musculus] gi|123858315|emb|CAM16585.1| phosphodiesterase 11A [Mus musculus] Length = 443 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 16/104 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 344 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 395 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLS 248 ++ +G WS I SHRD+ D+G V + W I LS Sbjct: 396 ELVRKGDYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEISRQLS 438 >gi|110802455|ref|YP_699158.1| hydroxyacid oxidase 2 [Clostridium perfringens SM101] gi|110682956|gb|ABG86326.1| FMN-dependent dehydrogenase [Clostridium perfringens SM101] Length = 340 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 29/160 (18%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L ++ +P +LK + ++ + EL +++G+ ++ GG + Sbjct: 195 EEIKELVNSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQ--------- 242 Query: 233 DIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 TP S E+ + + + + GG+R GVDILK I LGA + Sbjct: 243 ------------TPASCEVLKEIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGR 290 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PF+ D + V + SL+ E +M L G ++ + Sbjct: 291 PFITATFADGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|324516219|gb|ADY46462.1| Peroxisomal (S)-2-hydroxy-acid oxidase 2 [Ascaris suum] Length = 372 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%) Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGL 267 DIA R G + +H + D TP ++E + R GG+ Sbjct: 244 DIAVRCGVKGIIVSNHGGRQLDF----------TPATIECLPEIVRVVARRCPVFIDGGV 293 Query: 268 RNGVDILKSIILGASLGGLASPF---LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 RNG DI K+I LGA + P L A D V ++ LR EF+ M L G + + Sbjct: 294 RNGGDIFKAIALGADSVFVGRPILWGLTLAFQGKDGVRHVLQILRDEFLNIMQLAGCRTI 353 Query: 325 QELYLNTALIRHQ 337 E+ ++ H+ Sbjct: 354 DEIRTCKDIVVHE 366 >gi|255654872|ref|ZP_05400281.1| putative oxidative stress protein [Clostridium difficile QCD-23m63] gi|296449618|ref|ZP_06891394.1| glutamate synthase domain protein [Clostridium difficile NAP08] gi|296878062|ref|ZP_06902077.1| glutamate synthase domain protein [Clostridium difficile NAP07] gi|296261554|gb|EFH08373.1| glutamate synthase domain protein [Clostridium difficile NAP08] gi|296430815|gb|EFH16647.1| glutamate synthase domain protein [Clostridium difficile NAP07] Length = 480 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 40/283 (14%) Query: 36 LPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA----AEKTKVAMA 91 LP DEV+ + +GKK P++I + ++ +++ L IA A K+K AM Sbjct: 130 LPLNEHDEVNTTT-IIGKKAKKPMIIENPVYISHMSFGALSKELKIALAKGAAKSKTAMC 188 Query: 92 VGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNYDFGVQKA---HQAVHV 143 G ++ + A + + +Y P+ ++ N A+++ G + H Sbjct: 189 SGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKIGQGTKPGMGGHLPGEK 247 Query: 144 LGADGLFLHLNPL-QEIIQPNGNTNFADLSSK---IALLSSAMDV----PLLLKEVGCGL 195 + + + P+ +++I P + F ++ SK L+ +V P+ +K + G Sbjct: 248 VTEEIAKVRNKPVGKDVISP---SCFEEIQSKEDLKKLVDELREVSEGRPIGVK-ISAGH 303 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D+E + + I GRGG + + + +D S IPT +L AR Y Sbjct: 304 IEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS----------IPTIFALYRARKY 353 Query: 256 CN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + + +GGLR D K+I +GA +AS L A Sbjct: 354 IDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAA 396 >gi|126313571|ref|XP_001366976.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 366 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 127/332 (38%), Gaps = 62/332 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + HL R L +S VD G ++SFP+ I TG + ++ Sbjct: 54 DENISAYKKIHLRPRYLRNMSV--VDTRTTIQGCEISFPVCIGP-TGFHCLCWPEGEKST 110 Query: 80 AIAAEKTKVAMAVGS------QRVMFSDHNAIKSFELRQYAPH-----TVLISNLGAVQL 128 A AA+ + S + ++ + N ++ F+L Y H LI + A L Sbjct: 111 AKAAQAMNICYVTSSFSTCTFEDIVAAAPNGLRWFQL--YIQHDRQLTKKLIQQVEA--L 166 Query: 129 NYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGNT--NFADLSSKI- 175 Y V AV LG + G F+ + I+ N T + + S I Sbjct: 167 GYKALVLTVDTAV--LGNRLQDNRNKFSLGTFIQMKTFHVNIEENAETLLPISGIDSSIC 224 Query: 176 ----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 A + + +P++LK + L+ D EL L ++ ++ GG R L+ Sbjct: 225 WKDLAWIRTITQLPIILKGI---LTREDAELALNHNVQGIIVSNHGG---------RQLD 272 Query: 232 SDIGIVFQDWGIPTPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + IP + E+ + GG+R G D+LK++ LGA L P Sbjct: 273 T----------IPATIDALTEVVNAVKGRIEVYLDGGIRTGTDVLKALALGARCIFLGRP 322 Query: 290 FLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 L + + + L+KEF SM L G Sbjct: 323 ILWGLTYKGEEGIQQLLNLLKKEFYRSMALTG 354 >gi|168215506|ref|ZP_02641131.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239] gi|182382382|gb|EDT79861.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239] Length = 340 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 29/160 (18%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L ++ +P +LK + ++ + EL +++G+ ++ GG + Sbjct: 195 EEIKELVNSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQ--------- 242 Query: 233 DIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 TP S E+ + + + + GG+R GVDILK I LGA + Sbjct: 243 ------------TPASCEVLKEIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGR 290 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PF+ D + V + SL+ E +M L G ++ + Sbjct: 291 PFITATFADGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|74180906|dbj|BAE25651.1| unnamed protein product [Mus musculus] Length = 353 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ ++ + DL LL S +P++LK + L+ D EL +K IR ++ GG Sbjct: 201 PSSSSCWNDLP----LLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGG--- 250 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSI 277 R L+ P S++ R + + GG+R G D+LK++ Sbjct: 251 ------RQLDE------------VPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKAL 292 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P + A D V ++ L++E M L G + V E+ Sbjct: 293 ALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI 343 >gi|302695769|ref|XP_003037563.1| hypothetical protein SCHCODRAFT_81005 [Schizophyllum commune H4-8] gi|300111260|gb|EFJ02661.1| hypothetical protein SCHCODRAFT_81005 [Schizophyllum commune H4-8] Length = 496 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 26/158 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P++LK + C D L ++G+ I+ GG R L Sbjct: 342 IPWLRSVTRLPIVLKGIQC---VEDALLAAEAGVDGILISNHGG---------RQL---- 385 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPF 290 D+ +P L R + E + GG+ G D+LK++ LGA+ GL P+ Sbjct: 386 -----DYSLPPIEVLYRLRKHHPEVFGKMEIYIDGGITRGSDVLKAVCLGATAVGLGRPY 440 Query: 291 LKPAMDSSDAVVAAIES-LRKEFIVSMFLLGTKRVQEL 327 L A V I L E + +M L+G R+++L Sbjct: 441 LYAQGAYGVAGVKRITHILETEIVTAMRLMGASRIKDL 478 >gi|168214911|ref|ZP_02640536.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str. F4969] gi|182626134|ref|ZP_02953894.1| FMN-dependent dehydrogenase [Clostridium perfringens D str. JGS1721] gi|170713650|gb|EDT25832.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str. F4969] gi|177908571|gb|EDT71096.1| FMN-dependent dehydrogenase [Clostridium perfringens D str. JGS1721] Length = 340 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 29/160 (18%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L ++ +P +LK + ++ + EL +++G+ ++ GG + Sbjct: 195 EEIKELVNSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQ--------- 242 Query: 233 DIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 TP S E+ + + + + GG+R GVDILK I LGA + Sbjct: 243 ------------TPASCEVLKEIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGR 290 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PF+ D + V + SL+ E +M L G ++ + Sbjct: 291 PFITATFADGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|328865369|gb|EGG13755.1| hydroxyacid oxidase [Dictyostelium fasciculatum] Length = 395 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 31/159 (19%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A L S +P+++K V C D L +K G ++ G R L++ Sbjct: 245 LAWLKSITKLPVIVKGVMC---PQDALLAVKYGADGIIVSNHGA---------RQLDT-- 290 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGLASP 289 +P ++E+ PY A I GG+R G DILK++ GA + P Sbjct: 291 ----------SPSTIEVL-PYVVRAVGGRIPVIVDGGVRRGTDILKALAYGACAVMIGRP 339 Query: 290 FLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A D D V+ ++ LR E ++SM L G + ++ Sbjct: 340 VLWGLAADGYDGVLKVLQLLRDELVLSMALAGVNSISKI 378 >gi|326481053|gb|EGE05063.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 499 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + + GG+R DILK++ LGA G+ PFL AM + ++ V A++ L+ Sbjct: 382 ARGWDRKIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLK 440 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 441 DEMEMNMRLLGCTSIDQL 458 >gi|254974447|ref|ZP_05270919.1| putative oxidative stress protein [Clostridium difficile QCD-66c26] gi|255091839|ref|ZP_05321317.1| putative oxidative stress protein [Clostridium difficile CIP 107932] gi|255313574|ref|ZP_05355157.1| putative oxidative stress protein [Clostridium difficile QCD-76w55] gi|255516258|ref|ZP_05383934.1| putative oxidative stress protein [Clostridium difficile QCD-97b34] gi|255649355|ref|ZP_05396257.1| putative oxidative stress protein [Clostridium difficile QCD-37x79] gi|260682527|ref|YP_003213812.1| putative oxidative stress protein [Clostridium difficile CD196] gi|260686126|ref|YP_003217259.1| putative oxidative stress protein [Clostridium difficile R20291] gi|306519445|ref|ZP_07405792.1| putative oxidative stress protein [Clostridium difficile QCD-32g58] gi|260208690|emb|CBA61486.1| putative oxidative stress protein [Clostridium difficile CD196] gi|260212142|emb|CBE02783.1| putative oxidative stress protein [Clostridium difficile R20291] Length = 480 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 40/283 (14%) Query: 36 LPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA----AEKTKVAMA 91 LP DEV+ + +GKK P++I + ++ +++ L IA A + K AM Sbjct: 130 LPLNEHDEVNTTT-IIGKKAKKPMIIENPVYISHMSFGALSKELKIALAKGAAQNKTAMC 188 Query: 92 VGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNYDFGVQKA---HQAVHV 143 G ++ + A + + +Y P+ ++ N A+++ G + H Sbjct: 189 SGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKIGQGTKPGMGGHLPGEK 247 Query: 144 LGADGLFLHLNPL-QEIIQPNGNTNFADLSSK---IALLSSAMDV----PLLLKEVGCGL 195 + + + P+ Q++I P + F ++ SK L+ +V P+ +K + G Sbjct: 248 VTEEIAKVRNKPVGQDVISP---SCFEEIQSKEDLKKLIDELREVSEGRPIGVK-ISAGH 303 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D+E + + I GRGG + + + +D S IPT +L AR Y Sbjct: 304 IEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS----------IPTIFALYRARKY 353 Query: 256 CN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + + +GGLR D K+I +GA +AS L A Sbjct: 354 IDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAA 396 >gi|326470215|gb|EGD94224.1| mitochondrial cytochrome b2 [Trichophyton tonsurans CBS 112818] Length = 499 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + + GG+R DILK++ LGA G+ PFL AM + ++ V A++ L+ Sbjct: 382 ARGWDRKIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLK 440 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 441 DEMEMNMRLLGCTSIDQL 458 >gi|255933708|ref|XP_002558233.1| Pc12g14280 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582852|emb|CAP81055.1| Pc12g14280 [Penicillium chrysogenum Wisconsin 54-1255] Length = 497 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ +++G ++ GG S ++ +++ Sbjct: 318 IPWFKSITRMPIVLKGVQC---VEDVLRAVEAGCDGVVLSNHGGRQLETARSGIEVLAEV 374 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ R + + GG+R DILK++ LGA+ G+ PFL A Sbjct: 375 MPALRE------------RGWEKRIEVFVDGGVRRATDILKALCLGATGIGIGRPFLY-A 421 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + D V A++ LR E ++M L+G V +L Sbjct: 422 MSAYGIDGVDRAMQLLRDEMEMNMRLIGAPSVADL 456 >gi|66508573|ref|XP_625149.1| PREDICTED: hydroxyacid oxidase 1-like [Apis mellifera] Length = 367 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 140/350 (40%), Gaps = 62/350 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N + F + + R L +S + D S LG+K+S PL I+ +M + E N Sbjct: 40 NTEAFKKYRIRPRFLRNVS--KRDLSTTILGEKISMPLGIAPAAMQRMAHPEGECANVRA 97 Query: 80 AIAAEKTKVAMAVGS---QRVMFSDHNAIKSFELRQYAPHTVLISNLG--------AVQL 128 A A + + + + V + NAIK F+L Y V I+ +G A+ L Sbjct: 98 AQGAGTIYILSTISTSSIEEVAEAAPNAIKWFQLYIYKDRNVTINLVGRAERAGFKAIVL 157 Query: 129 NYD---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------------NFADLS- 172 D FG ++A + + L L Q + N N D S Sbjct: 158 TVDAPLFGDRRAD--IRNKFSLPHHLRLGNFQGKLSTKINNAESGSGLSEYVMNLFDASL 215 Query: 173 --SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L S +P++LK + L+ D +L +++GI ++ G R + Sbjct: 216 TWDDIKWLKSITKLPIILKGI---LTPEDAKLAIENGISAIIVSNHGA---------RQV 263 Query: 231 ESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 +S IP + E+ + + + GG+R G+D+ K++ LGA + A Sbjct: 264 DS----------IPATIEALPEIVKAVNGKLEIYMDGGIRQGIDVFKALALGAKMVFTAR 313 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L + A +E RKE V+ L G V ++ + +I+H+ Sbjct: 314 PLLWGLSYGGERGARAVLEVFRKEIDVAFALTGCATVNDVTKD--MIQHE 361 >gi|170727347|ref|YP_001761373.1| ferredoxin-dependent glutamate synthase [Shewanella woodyi ATCC 51908] gi|169812694|gb|ACA87278.1| ferredoxin-dependent glutamate synthase [Shewanella woodyi ATCC 51908] Length = 516 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 98/256 (38%), Gaps = 51/256 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL PL +S M+ G + E L+I AE + G ++ + Sbjct: 181 KLKIPLFVSDMSFG--ALSEEAKTALSIGAELAGTGICSGEGGML-----------PEEQ 227 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQ---EIIQ----P 162 A ++ L + Q Y + + QA H G G HL ++ +I Q P Sbjct: 228 AANSRYFYELASAQFGYKEELMHSIQAFHFKGGQGAKTGTGGHLPGVKNKGKISQVRGIP 287 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G + FA+LSS A V + V G DI+ L + Y Sbjct: 288 EGQSAISPPTFANLSSSSDFKRFADRVREVSGGVPIGFKLSANHIERDIQFALDASADYI 347 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + E RD S +PT +L AR Y +E I +G Sbjct: 348 ILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARRYLDEQGASGRVTLIVTG 397 Query: 266 GLRNGVDILKSIILGA 281 GLR +D +K++ LGA Sbjct: 398 GLRVPMDFVKAMALGA 413 >gi|20379611|gb|AAH27754.1| Hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] Length = 353 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ ++ + DL LL S +P++LK + L+ D EL +K IR ++ GG Sbjct: 201 PSTSSCWNDLP----LLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGG--- 250 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSI 277 R L+ P S++ R + + GG+R G D+LK++ Sbjct: 251 ------RQLDE------------VPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKAL 292 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P + A D V ++ L++E M L G + V E+ Sbjct: 293 ALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI 343 >gi|168031904|ref|XP_001768460.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680385|gb|EDQ66822.1| predicted protein [Physcomitrella patens subsp. patens] Length = 372 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 27/157 (17%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L S +P+L+K + L++ D L L++G++ ++ G R L+ Sbjct: 219 VEWLQSITHLPVLVKGI---LTAEDASLALQAGVKGIIVSNHGA---------RQLDH-- 264 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGAS--LGGLASPF 290 +P +S+ E+ GG+R G D+ K++ LGAS G P+ Sbjct: 265 --------VPATISVLEEVVYAVRGRVPVFLDGGIRRGSDVFKALALGASGVFVGRPVPY 316 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+D ++ LR EF ++M L+G + V+E+ Sbjct: 317 -ALAVDGEAGATKVLQMLRDEFELTMALIGVRSVKEI 352 >gi|169764020|ref|XP_001727910.1| cytochrome B2 [Aspergillus oryzae RIB40] gi|83770938|dbj|BAE61071.1| unnamed protein product [Aspergillus oryzae] Length = 498 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L R YC E + GG+R G D++K++ LGA G+ P L Sbjct: 374 DTAPPAVHTLMEIRKYCPEVFDRLEVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLG 433 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 D V ++ L E M LLG + V +L ++NT L+ Q Sbjct: 434 AGGVDGVKRTLQILADESKTCMRLLGVETVDKLGPQHINTRLLEQQ 479 >gi|242812213|ref|XP_002485912.1| oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] gi|218714251|gb|EED13674.1| oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] Length = 489 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA---IESLRKEFIVSM 316 Q GG+R G D++K++ LGA+ G+ PFL +M S IE +R+E +M Sbjct: 399 QIFIDGGVRRGTDVVKALALGATAVGMGRPFLY-SMSSGYGEAGTRRMIEIMREEIEQNM 457 Query: 317 FLLGTKRVQELY---LNTA 332 L+G ++ EL LNT+ Sbjct: 458 ALVGATKISELRRELLNTS 476 >gi|149708916|ref|XP_001497100.1| PREDICTED: similar to Hydroxyacid oxidase 2 (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) [Equus caballus] Length = 352 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 209 LSWLQSITQLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 265 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LKS+ LGA L P L Sbjct: 266 VAAVK-----------------GKIEVYLDGGIRTGNDVLKSLALGAKCVFLGRPILWGL 308 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + L+ EF SM L G + V E+ Sbjct: 309 ACKGERGVEEVLNILKNEFHTSMTLTGCRSVAEI 342 >gi|294678564|ref|YP_003579179.1| L-lactate dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294477384|gb|ADE86772.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter capsulatus SB 1003] Length = 387 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G DILK++ LGA + ++ +A V A+E +RKE +SM L G KRV Sbjct: 309 GIRSGQDILKALALGAKGTMIGRAYVHGLGAMGEAGVTRALEVMRKELDISMALCGEKRV 368 Query: 325 QELYLNTALI 334 Q+L + L+ Sbjct: 369 QDLGRDNLLV 378 >gi|242807022|ref|XP_002484865.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] gi|218715490|gb|EED14912.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] Length = 496 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIES 307 R YC E + + GG+R G D++K++ LGA G+ P L A V +E Sbjct: 389 RKYCPEVFDKIEVLVDGGIRRGTDVVKALCLGARAVGIGRPALWGLGAGGIAGVERTLEI 448 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L E M LLG +++ +L Y+N+ ++ Q Sbjct: 449 LADETKTCMQLLGVEKISDLGPEYINSRIVEQQ 481 >gi|254489918|ref|ZP_05103113.1| hypothetical protein MDMS009_249 [Methylophaga thiooxidans DMS010] gi|224465003|gb|EEF81257.1| hypothetical protein MDMS009_249 [Methylophaga thiooxydans DMS010] Length = 443 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KI L D VP+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 207 TGPDDLEIKIKELREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAAT 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+RNG D+ K Sbjct: 266 Q-----------DVFIEHVGIPTMAAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKC 314 Query: 277 IILGA 281 + LGA Sbjct: 315 MALGA 319 >gi|308813437|ref|XP_003084025.1| COG1304: L-lactate dehydrogenase (ISS) [Ostreococcus tauri] gi|116055907|emb|CAL57992.1| COG1304: L-lactate dehydrogenase (ISS) [Ostreococcus tauri] Length = 400 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 29/213 (13%) Query: 120 ISNLGAVQLNYDFGVQK--AHQAVHVLGADGLFLHLNPLQEII--QPNGNTNFADLSSKI 175 + + A Y+F + + + L DGL P+ E Q + N N+ D Sbjct: 197 VDAMSAPAWTYEFLTSQRIEYALIRDLQRDGLLRDSLPIAEFATEQFDANFNWKDAE--- 253 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 S D P+ LK + L +R D+ W R LES + Sbjct: 254 -WFRSQWDGPIALKGI----------LRPDDAMRALDVGY--DAVWVTAHGARQLESTVA 300 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 P + + +AQ I GG+ GVD++K++ LGA+ G+ +L A Sbjct: 301 --------PIDVLPSIREAVGEDAQVIYDGGVMRGVDVVKALALGATAVGVGKAYLYGLA 352 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A + L E +M LLG + V+EL Sbjct: 353 AGGERGVSKAFDMLTCETKRAMGLLGVRDVKEL 385 >gi|320592190|gb|EFX04629.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 571 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLR 309 AR N + GGLR DILK++ LGA G+ PFL AM + D V A+ L+ Sbjct: 456 ARGLENRLEIYIDGGLRRATDILKALCLGARGVGIGRPFLY-AMSAYGVDGVSRAMALLK 514 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E + M LLG +++L + IR Sbjct: 515 DELEMDMRLLGAPAIRDLGPDLVDIR 540 >gi|239625348|ref|ZP_04668379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519578|gb|EEQ59444.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 468 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 37/279 (13%) Query: 26 FDDWHLIHRALPEISFDEVDP--SVEFLGKK------LSFPLLISSMTGGNNKMIERINR 77 +DD + L + DE P + +GK L P+ IS M+ G + + Sbjct: 105 WDDILFLGAQLNPMPLDEHAPVKTETIIGKHARKPMVLEHPVYISHMSFG--ALSKETKT 162 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNYDF 132 LA + + AM G ++ + A + + +Y P+ ++ N A+++ Sbjct: 163 ALAKGSAMVRTAMCSGEGGILPEEREAAYRY-IFEYVPNLYSVTEENLKNADAIEIKIGQ 221 Query: 133 GVQKA---HQAVHVLGADGLFLHLNPL-QEIIQPN---GNTNFADLSSKIALLSSAMDVP 185 G + H + + + PL Q++I P+ G DL + + L D Sbjct: 222 GTKPGMGGHLPGKKVTPEIAAVRNKPLGQDVISPSRFPGIDTREDLKALVEKLREESDGR 281 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + ++ G D+E + +G + I GRGG + + + RD S +PT Sbjct: 282 PIGIKIAAGRIERDLEYCVFAGPDFITIDGRGGATGASPKLIRDATS----------VPT 331 Query: 246 PLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILG 280 +L AR Y +EA + +GGLR D K++ +G Sbjct: 332 IYALYRARKYLDEAGADIDLVITGGLRVSSDFAKALAMG 370 >gi|47221968|emb|CAG08223.1| unnamed protein product [Tetraodon nigroviridis] Length = 367 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 44/202 (21%) Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 DG+F + E NT +S K + L S +P+++K + L+ D EL ++ Sbjct: 185 DGVFQQEAAVTEEYGIPANTLDPSISWKDVYWLQSITRLPIIIKGI---LTKEDAELAVE 241 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA-- 263 G++ ++ GG R L+ P SL M P C Q A Sbjct: 242 HGVQGIIVSNHGG---------RQLDGG------------PASLHM--PPCFALQIDALS 278 Query: 264 --------------SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 GG+R G D+LKS+ LGA + P + A + V ++ L Sbjct: 279 EIVDTVQGRIEVYLDGGIRTGSDVLKSLALGAKCVFIGRPAVWGLAYKGEEGVREVLQIL 338 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 EF +SM L G + V E+ N Sbjct: 339 NDEFRLSMALSGCRNVAEINRN 360 >gi|116626283|ref|YP_828439.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116229445|gb|ABJ88154.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 365 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%) Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAA 304 PL +E A I GG+R G D++K++ LGA+ + P+L + ++ V Sbjct: 279 PLVVEKV---AGRAPVIVDGGIRRGTDVIKALALGAAAVQIGRPYLWGLGVSGAEGVTRV 335 Query: 305 IESLRKEFIVSMFLLG 320 +E LRKE ++M L+G Sbjct: 336 VEILRKELELAMALMG 351 >gi|126698408|ref|YP_001087305.1| putative oxidative stress protein [Clostridium difficile 630] gi|255099941|ref|ZP_05328918.1| putative oxidative stress protein [Clostridium difficile QCD-63q42] gi|255305830|ref|ZP_05350002.1| putative oxidative stress protein [Clostridium difficile ATCC 43255] gi|115249845|emb|CAJ67662.1| putative oxidative stress glutamate synthase [Clostridium difficile] Length = 480 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 40/283 (14%) Query: 36 LPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA----AEKTKVAMA 91 LP DEV+ + +GKK P++I + ++ +++ L IA A + K AM Sbjct: 130 LPLNEHDEVNTTT-IIGKKAKKPMIIENPVYISHMSFGALSKELKIALAKGAAQNKTAMC 188 Query: 92 VGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNYDFGVQKA---HQAVHV 143 G ++ + A + + +Y P+ ++ N A+++ G + H Sbjct: 189 SGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKIGQGTKPGMGGHLPGEK 247 Query: 144 LGADGLFLHLNPL-QEIIQPNGNTNFADLSSK---IALLSSAMDV----PLLLKEVGCGL 195 + + + P+ Q++I P + F ++ SK L+ +V P+ +K + G Sbjct: 248 VTEEIAKVRNKPVGQDVISP---SCFEEIQSKEDLKKLVDELREVSEGRPIGVK-ISAGH 303 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D+E + + I GRGG + + + +D S IPT +L AR Y Sbjct: 304 IEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS----------IPTIFALYRARKY 353 Query: 256 CN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + + +GGLR D K+I +GA +AS L A Sbjct: 354 IDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAA 396 >gi|16264891|ref|NP_437683.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15141030|emb|CAC49543.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] Length = 378 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G +R Sbjct: 308 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKRR 367 Query: 324 VQEL 327 + E+ Sbjct: 368 ITEV 371 >gi|326795694|ref|YP_004313514.1| glutamate synthase (NADPH) [Marinomonas mediterranea MMB-1] gi|326546458|gb|ADZ91678.1| Glutamate synthase (NADPH) [Marinomonas mediterranea MMB-1] Length = 441 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL+ KI L D VP+ +K VG + D++L +K+G + G +GGT+ ++ Sbjct: 210 DLAIKILELREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAATQ--- 265 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILG 280 + + GIPT ++ A E Q I SGG+RNG D+ K + LG Sbjct: 266 --------DVFIEHVGIPTLAAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKCMALG 317 Query: 281 A 281 A Sbjct: 318 A 318 >gi|307312328|ref|ZP_07591963.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] gi|306899497|gb|EFN30128.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] Length = 378 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G +R Sbjct: 308 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKRR 367 Query: 324 VQEL 327 + E+ Sbjct: 368 ITEV 371 >gi|260803693|ref|XP_002596724.1| hypothetical protein BRAFLDRAFT_285580 [Branchiostoma floridae] gi|229281983|gb|EEN52736.1| hypothetical protein BRAFLDRAFT_285580 [Branchiostoma floridae] Length = 361 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 71/317 (22%), Positives = 125/317 (39%), Gaps = 65/317 (20%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------QRVM 98 D S LG+ + P+ +S M G + A AA + K M + + VM Sbjct: 62 DLSTTLLGRAVDMPIGVSPM-GALGLFAPNGDLCAARAAARFKTCMISSTSSNSTLEDVM 120 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL------- 151 S +K F+L Q P L + VQ V++A V+ D ++ Sbjct: 121 TSSPEGLKWFQL-QIRPDRELTKTM--VQR-----VERAGYRALVVTVDASYVGRRYQEL 172 Query: 152 --------HLNPL---QEIIQ-------PNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 HL PL Q ++Q N + A +A L S +P++LK + Sbjct: 173 RYRFKLPPHLKPLNLGQNVVQVRSLDHVKNRGHDPALSWKDVAWLRSICSLPIILKGI-- 230 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL--EM 251 L++ D L ++ G+ ++ GG R L+ G+P + E+ Sbjct: 231 -LTAEDTRLAVQHGVDGILVSNHGG---------RQLD----------GVPATIEALPEI 270 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRK 310 + ++ + GG+R G D+LK++ LGA + P + D + + L++ Sbjct: 271 VQAAGDKLEVYMDGGVRTGTDVLKALALGARAVFVGRPVIWGLCYDGEEGATKVLSILKE 330 Query: 311 EFIVSMFLLGTKRVQEL 327 E ++M L G R+ ++ Sbjct: 331 ELSLAMALSGCTRLADI 347 >gi|149022324|gb|EDL79218.1| rCG26934, isoform CRA_a [Rattus norvegicus] gi|149022326|gb|EDL79220.1| rCG26934, isoform CRA_a [Rattus norvegicus] Length = 373 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 16/104 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 175 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 226 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLS 248 ++ +G WS I SHRD+ D+G V + W I ++ Sbjct: 227 ELVSKGAYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEISRQVA 269 >gi|169629212|ref|YP_001702861.1| putative L-lactate 2-monooxygenase [Mycobacterium abscessus ATCC 19977] gi|169241179|emb|CAM62207.1| Putative L-lactate 2-monooxygenase [Mycobacterium abscessus] Length = 384 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 G+P L A G+R+G+DIL+++ LGASL G+A P++ A+D ++ Sbjct: 292 GVPAIDGLAAAVEAAGSVPVTFDSGIRDGIDILRAVALGASLVGVARPYVYGLALDGTNG 351 Query: 301 VVAAIESLRKEFIVSM 316 V I+SL E ++M Sbjct: 352 VKHVIQSLLAEADLTM 367 >gi|169343730|ref|ZP_02864729.1| FMN-dependent dehydrogenase [Clostridium perfringens C str. JGS1495] gi|169298290|gb|EDS80380.1| FMN-dependent dehydrogenase [Clostridium perfringens C str. JGS1495] Length = 340 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 66/333 (19%), Positives = 125/333 (37%), Gaps = 74/333 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPS--VEFLGKKLSFPLLISSMTGG----NNKMIER 74 RN K ++ L R + D +P+ +E GK + PL + +TG K+ ER Sbjct: 46 RNVKALEEIKLNMRTI----HDAKNPTTNIEIFGKNMDLPLFAAPITGTMLNMGGKVSER 101 Query: 75 ----------INRNLAIAAEKTKVAMAVGSQRVMFSDHNA-----IKSFELRQYAPHTVL 119 ++ + T V + + + + ++N IK ++ + Sbjct: 102 EYIEGVVKGCLDSGIYPMVGDTAVDLCLATNLEVIEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 GA + GV + L +G + L+EI + L Sbjct: 162 AEKAGA----FAVGVDIDAAGLITLAMNGKPVEPKNLEEIKE----------------LV 201 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++ +P +LK + ++ + EL +++G+ ++ GG + Sbjct: 202 NSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQ---------------- 242 Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 TP + E+ + + + + GG+R GVDILK I LGA + PF+ Sbjct: 243 -----TPATCEVLKEIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATF 297 Query: 296 -DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + V + SL+ E +M L G ++ + Sbjct: 298 ADGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|146417137|ref|XP_001484538.1| hypothetical protein PGUG_03919 [Meyerozyma guilliermondii ATCC 6260] Length = 273 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%) Query: 163 NGNTNF-ADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 NG T++ ++LS K I + + ++P+ LK + G D+ L + GI ++ GG Sbjct: 79 NGKTDYPSNLSWKHIERIRACTNIPIALKGIQRG---EDVVLAAEKGISGVVLSNHGGRQ 135 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++ S+ + ++ G+ N+ + GG+R G DI+K++ LG Sbjct: 136 LDFSRPPLEVLSEAKQMLKERGLD------------NKIEIYIDGGIRRGSDIVKALCLG 183 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL PFL A + V+ + L E +M LLG +++L Sbjct: 184 ATGVGLGRPFLYAMAGYGEEGVLKLVLLLEGEVKNNMKLLGVDNIKDL 231 >gi|307319772|ref|ZP_07599196.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti AK83] gi|306894503|gb|EFN25265.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti AK83] Length = 378 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G +R Sbjct: 308 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKRR 367 Query: 324 VQEL 327 + E+ Sbjct: 368 ITEV 371 >gi|13473966|ref|NP_105534.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Mesorhizobium loti MAFF303099] gi|14024717|dbj|BAB51320.1| glycolate oxidase (S)-2-hydroxy-acid oxidase, peroxisomal [Mesorhizobium loti MAFF303099] Length = 352 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + IA L S +PL+LK + L D E + +G ++ G + + + D Sbjct: 211 ADIAWLRSLTTLPLILKGI---LDPDDAEQAIGTGADAIVVSNHGSRNLDTLPAAID--- 264 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +P +A I GG+R G D+LK+I LGAS + P++ Sbjct: 265 ---------ALPA-----IAERVAGRIPIILDGGVRRGTDVLKAIALGASAVMIGRPYVY 310 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A ++ V + LR++F ++M L G R+ E+ Sbjct: 311 ALATAGAEGVAHCVNLLRRDFEMAMALTGRARLGEI 346 >gi|83775878|dbj|BAE65997.1| unnamed protein product [Aspergillus oryzae] Length = 375 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Query: 242 GIPTPLSL-----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G P+PL + E A + + A GG+R G D+LK + LG + GL PF+ Sbjct: 278 GTPSPLEIALEIHEEAPELFEQIEIYADGGIRYGADVLKLLALGVTAVGLGRPFMFANTY 337 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V AI+ L+ E + LG +++L Sbjct: 338 GVEGVKHAIQLLKHEIAIDAGNLGVGDLKKL 368 >gi|301782752|ref|XP_002926792.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like, partial [Ailuropoda melanoleuca] Length = 338 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 141 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 192 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLS 248 ++ +GG W+ I++HRD+ D+G V + W I ++ Sbjct: 193 ELVSKGGYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEISRQVA 235 >gi|302507398|ref|XP_003015660.1| FMN-dependent dehydrogenase family protein [Arthroderma benhamiae CBS 112371] gi|291179228|gb|EFE35015.1| FMN-dependent dehydrogenase family protein [Arthroderma benhamiae CBS 112371] Length = 333 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + + GG+R DILK++ LGA G+ PFL AM + ++ V A++ L+ Sbjct: 216 ARGWDRKIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLK 274 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 275 DEMEMNMRLLGCTSIDQL 292 >gi|159898395|ref|YP_001544642.1| (S)-2-hydroxy-acid oxidase [Herpetosiphon aurantiacus ATCC 23779] gi|159891434|gb|ABX04514.1| (S)-2-hydroxy-acid oxidase [Herpetosiphon aurantiacus ATCC 23779] Length = 358 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 30/192 (15%) Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 A Q LGA G+ H G + A I L S +P++LK + LS Sbjct: 189 AGQHQQTLGASGIATH---------AAGRFDAALTWEAIDWLRSLTRLPIVLKGI---LS 236 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + D +L ++ G+ ++ GG R L++ + P ++ C Sbjct: 237 AEDAQLAVQHGVDGLIVSNHGG---------RQLDTVAATIE-----CLPAIVDAVGSTC 282 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + GG+R G D+LK++ LGA + + P L A+D +E LR E+ ++ Sbjct: 283 ---EVYLDGGIRRGTDVLKALALGAKMVFVGRPLLWGLAVDGQQGAHHVLELLRSEYSLA 339 Query: 316 MFLLGTKRVQEL 327 + L+G +L Sbjct: 340 LGLIGCPHSHQL 351 >gi|302383940|ref|YP_003819763.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] gi|302194568|gb|ADL02140.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] Length = 394 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLG 320 I GG+R G DI+K++ LGA+ + P+L + +A VA A+ LR EF ++ L G Sbjct: 309 ICDGGVRRGSDIVKAVALGATACSIGRPYLYGLAAAGEAGVARALAILRDEFERTLALAG 368 Query: 321 TKRVQELYLNTALIRHQ 337 +Q L+ IRH+ Sbjct: 369 VPAIQS--LSRRHIRHR 383 >gi|317032758|ref|XP_001394349.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 398 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G DI+K+I LGA G+ FL + V IE +R E +M LL Sbjct: 301 EVFVDGGIRRGTDIIKAICLGAKAVGMGRHFLYSLCYGQEGVERLIEIMRDELETTMKLL 360 Query: 320 GTKRVQELYL 329 G + + +L Sbjct: 361 GITDLSQAHL 370 >gi|317158625|ref|XP_001827130.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 385 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Query: 242 GIPTPLSL-----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G P+PL + E A + + A GG+R G D+LK + LG + GL PF+ Sbjct: 281 GTPSPLEIALEIHEEAPELFEQIEIYADGGIRYGADVLKLLALGVTAVGLGRPFMFANTY 340 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V AI+ L+ E + LG +++L Sbjct: 341 GVEGVKHAIQLLKHEIAIDAGNLGVGDLKKL 371 >gi|157106968|ref|XP_001649565.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] gi|108879701|gb|EAT43926.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] Length = 389 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 25/148 (16%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P+L+K + L+ D E+ + G+ ++ GG R L+S Sbjct: 225 ELPVLVKGI---LTKEDAEIAVSKGVSGIWVSNHGG---------RQLDS---------- 262 Query: 243 IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSD 299 P + + E+ ++ I GG+RNG D+ K++ LGA++ + P L A++ Sbjct: 263 APATIEVLPEIVAAVGDQTTIIVDGGVRNGKDVFKALGLGANMVMIGRPALWGLAVNGQQ 322 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ LR E +M L G +RV ++ Sbjct: 323 GVEQVLDILRDELDTTMALAGCQRVADI 350 >gi|190891536|ref|YP_001978078.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190696815|gb|ACE90900.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 395 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG+R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIAARVGDSIAVMVDGGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG RV ++ Sbjct: 359 PGVLRAADILKTELYSNMALLGVTRVGDI 387 >gi|156544032|ref|XP_001604479.1| PREDICTED: similar to (s)-2-hydroxy-acid oxidase [Nasonia vitripennis] Length = 366 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 29/158 (18%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L S +P++LK V L++ D ELG+K G ++ G R ++ Sbjct: 219 VTWLKSVTKLPIVLKGV---LTAEDAELGVKYGASAIMVSNHGA---------RQIDG-- 264 Query: 235 GIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 TP S+E + R N+ + GG+ G D+ K++ LGA + P Sbjct: 265 ----------TPASIEALPEIVRAVGNKVEVFMDGGITQGTDVFKALALGAKMVFFGRPL 314 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L + +E +R+E + L G K V+++ Sbjct: 315 LWGLTCGGEQGARSVLEMMRREIDQAFALAGCKSVEQV 352 >gi|260803954|ref|XP_002596854.1| hypothetical protein BRAFLDRAFT_115875 [Branchiostoma floridae] gi|229282114|gb|EEN52866.1| hypothetical protein BRAFLDRAFT_115875 [Branchiostoma floridae] Length = 380 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+A + + GG+R G D+LK++ LGA + P L A Sbjct: 266 GVPATIDALREVASAVNGQVEVYLDGGVRTGTDVLKALALGARCVFVGRPVLWGLAYKGQ 325 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V ++ L++EF +SM L G RV + AL+ H+ Sbjct: 326 EGVQEMLQMLKEEFSLSMALSGCSRVSA--ITPALVVHE 362 >gi|332702598|ref|ZP_08422686.1| (S)-2-hydroxy-acid oxidase [Desulfovibrio africanus str. Walvis Bay] gi|332552747|gb|EGJ49791.1| (S)-2-hydroxy-acid oxidase [Desulfovibrio africanus str. Walvis Bay] Length = 338 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVS 315 E +A GG+RNGVD+LK + LGA + PF A+ D V A ++ L E + Sbjct: 260 GEMVVLADGGVRNGVDVLKMLALGADAVLIGRPFAVAAVGGLQDGVTAYLDQLAGELRSA 319 Query: 316 MFLLGTKRVQEL 327 M L GT + ++ Sbjct: 320 MVLTGTAKASQV 331 >gi|327297791|ref|XP_003233589.1| L-lactate dehydrogenase [Trichophyton rubrum CBS 118892] gi|326463767|gb|EGD89220.1| L-lactate dehydrogenase [Trichophyton rubrum CBS 118892] Length = 460 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + GG+R DILK++ LGA G+ PFL AM + ++ V A++ L+ Sbjct: 343 ARGWDRRIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLK 401 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 402 DEMEMNMRLLGCTSIDQL 419 >gi|218510679|ref|ZP_03508557.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli Brasil 5] Length = 395 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG+R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIAARVGDSIAVMVDGGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG RV ++ Sbjct: 359 PGVLRAADILKTELYSNMALLGVTRVGDI 387 >gi|134079030|emb|CAK48339.1| unnamed protein product [Aspergillus niger] Length = 401 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G DI+K+I LGA G+ FL + V IE +R E +M LL Sbjct: 304 EVFVDGGIRRGTDIIKAICLGAKAVGMGRHFLYSLCYGQEGVERLIEIMRDELETTMKLL 363 Query: 320 GTKRVQELYL 329 G + + +L Sbjct: 364 GITDLSQAHL 373 >gi|227822933|ref|YP_002826905.1| L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium fredii NGR234] gi|227341934|gb|ACP26152.1| L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium fredii NGR234] Length = 381 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 27/147 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL+LK + L D ++ K+G ++ GG R L+ G P Sbjct: 248 PLILKGI---LDPEDAKMAAKTGADAIIVSNHGG---------RQLD----------GAP 285 Query: 245 TPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDA 300 + +S+ ++ ++ + GG+R+G D+LK++ LGA + PFL AM D Sbjct: 286 SSISMLPKIIDAVGDQIEVHVDGGIRSGQDVLKAVALGAKGTFIGRPFLYGLGAM-GKDG 344 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A++ +RKE ++M L G + + ++ Sbjct: 345 VTLALDIIRKEMDITMALCGKRSITDV 371 >gi|71003179|ref|XP_756270.1| hypothetical protein UM00123.1 [Ustilago maydis 521] gi|46096275|gb|EAK81508.1| hypothetical protein UM00123.1 [Ustilago maydis 521] Length = 583 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 22/147 (14%) Query: 184 VPLLLKEVGCGLSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +PL LK G+ ++ D+EL +K G+ ++ GG R LE + Sbjct: 430 LPLYLK----GIQTVEDVELAVKHGVEGVVLSNHGG---------RSLE------YAPAA 470 Query: 243 IPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 + + L RP ++ + GG+R G D+LK++ LGA GL FL A Sbjct: 471 LDVLVELRQRRPDLFDKIEVFMDGGVRRGTDVLKAVALGAKAVGLGRSFLFAQSGYGQAG 530 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V AI+ L+ E M LLG + +L Sbjct: 531 VTRAIQILQDEIHRGMQLLGVSSLDQL 557 >gi|188595642|ref|NP_001120953.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2 [Rattus norvegicus] gi|18143349|dbj|BAB79627.1| phosphodiesterase 11A2 [Rattus norvegicus] Length = 581 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 383 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 434 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 435 ELVSKGAYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 472 >gi|331222371|ref|XP_003323859.1| L-lactate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302849|gb|EFP79440.1| L-lactate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 494 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R D+LK++ LGA+ GL PFL ++ S VV AI+ L+ E ++M L+G Sbjct: 393 GGVRRASDVLKALCLGATGVGLGRPFLYAYSVYGSQGVVRAIQILKDEMEMNMRLIGAPT 452 Query: 324 VQEL 327 + +L Sbjct: 453 LADL 456 >gi|83771201|dbj|BAE61333.1| unnamed protein product [Aspergillus oryzae] Length = 517 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKE 311 R + N+ + GG+R DILK++ LGA G+ PFL A V A++ L+ E Sbjct: 400 RGWENKIEIFIDGGVRRSTDILKALCLGARGVGIGRPFLYAMSTYGQAGVDRAMQLLKDE 459 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 ++M L+G ++ + LN +LI Sbjct: 460 MEMNMRLIGATKISD--LNPSLI 480 >gi|238502675|ref|XP_002382571.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] gi|317148047|ref|XP_001822466.2| cytochrome b2 [Aspergillus oryzae RIB40] gi|220691381|gb|EED47729.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] Length = 500 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKE 311 R + N+ + GG+R DILK++ LGA G+ PFL A V A++ L+ E Sbjct: 383 RGWENKIEIFIDGGVRRSTDILKALCLGARGVGIGRPFLYAMSTYGQAGVDRAMQLLKDE 442 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 ++M L+G ++ + LN +LI Sbjct: 443 MEMNMRLIGATKISD--LNPSLI 463 >gi|302413039|ref|XP_003004352.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261356928|gb|EEY19356.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 383 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 17/144 (11%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LK + ++ D + + +G+R ++ GG S ++ DI V Sbjct: 243 LPIVLKGI---MTVEDAQAAVSNGVRAIILSNHGGRQLDGSPSSLEVALDIHKV------ 293 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A + + A GG+R G D+LK + LG G+ PF+ D V+ Sbjct: 294 --------APEIFKQIEVYADGGVRYGTDVLKLLALGVRAVGVGRPFMYANSYGYDGVLQ 345 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+++ V LG +++L Sbjct: 346 AIQMLKRQISVDAANLGVTDLKKL 369 >gi|295659078|ref|XP_002790098.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226282000|gb|EEH37566.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 499 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + GG++ G D++K++ LGA G+ +P Sbjct: 375 DTAPPAVHTLMEIRKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARCVGVGRAPLFGLG 434 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG RV++L ++N + Q Sbjct: 435 AGGVEGVERVLEILSSETKTAMHLLGVGRVEDLGMQHINARAVEQQ 480 >gi|189205965|ref|XP_001939317.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975410|gb|EDU42036.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 500 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 247 LSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 ++L R YC E + GGLR+G D+LK++ LGA+ G+ PFL S V Sbjct: 389 MTLLEIRTYCPEVLGKLEVFLDGGLRDGNDVLKALCLGATAVGVGRPFLYALGAYGSKGV 448 Query: 302 VAAIESLRKEFIVSMFLLG 320 ++ L +E M LLG Sbjct: 449 ERCVDILAEEVQTGMRLLG 467 >gi|188595640|ref|NP_001120952.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3 [Rattus norvegicus] gi|18143351|dbj|BAB79628.1| phosphodiesterase 11A3 [Rattus norvegicus] Length = 685 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 487 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 538 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 539 ELVSKGAYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 576 >gi|212536606|ref|XP_002148459.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210070858|gb|EEA24948.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 488 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT--- 321 GG+R G DILK++ LGA+ L PFL + V I+ L+ E +M L+G Sbjct: 396 GGIRRGTDILKALCLGATSVSLGRPFLYSVLYGEQGVQHLIQILKDELETAMRLVGITDL 455 Query: 322 KRVQELYLNT 331 +V ++NT Sbjct: 456 SQVNSRFVNT 465 >gi|50553626|ref|XP_504224.1| YALI0E21307p [Yarrowia lipolytica] gi|49650093|emb|CAG79819.1| YALI0E21307p [Yarrowia lipolytica] Length = 493 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 A+ + + + GG+R D++K++ LGA G+ PFL AM + D V I+ L+ Sbjct: 377 AKGWQDYIEVYIDGGIRRATDVIKALCLGAKGVGIGRPFLY-AMSTYGEDGVCHLIQLLK 435 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M L+G ++++L Sbjct: 436 DEMEMNMRLIGATKIEDL 453 >gi|302887789|ref|XP_003042782.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256723695|gb|EEU37069.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 494 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R DI+K++ LGA G+ PFL AM S + V A++ L+ E ++M L+G Sbjct: 390 GGIRRSTDIIKALCLGAKGVGIGRPFLY-AMSSYGQEGVERAMQLLKDEMEMNMRLIGCA 448 Query: 323 RVQELYLNTALI 334 +V++ LN +L+ Sbjct: 449 KVED--LNPSLV 458 >gi|87120065|ref|ZP_01075961.1| Ferredoxin-dependent glutamate synthase [Marinomonas sp. MED121] gi|86164767|gb|EAQ66036.1| Ferredoxin-dependent glutamate synthase [Marinomonas sp. MED121] Length = 440 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL+ KI + D VP+ +K VG + D++L +K+G + G +GGT+ ++ Sbjct: 209 DLAIKIQEIREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAATQ--- 264 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILG 280 + + GIPT ++ A E Q I SGG+RNG D+ K + LG Sbjct: 265 --------EVFIEHVGIPTLAAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKCMALG 316 Query: 281 A 281 A Sbjct: 317 A 317 >gi|328767351|gb|EGF77401.1| hypothetical protein BATDEDRAFT_30699 [Batrachochytrium dendrobatidis JAM81] Length = 491 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFL 318 + GG R G DI K++ LGA GL PFL A V AI+ LR+E + M L Sbjct: 387 EIYVDGGFRRGTDIFKALALGAKGIGLGRPFLYAMSGYGQAGVERAIDLLREELEMVMRL 446 Query: 319 LGTKRVQEL 327 +G R+ ++ Sbjct: 447 MGVTRLDDI 455 >gi|307312320|ref|ZP_07591955.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] gi|306899489|gb|EFN30120.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] Length = 150 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G +R Sbjct: 80 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKRR 139 Query: 324 VQEL 327 + E+ Sbjct: 140 ITEV 143 >gi|254283384|ref|ZP_04958352.1| hypothetical protein NOR51B_1884 [gamma proteobacterium NOR51-B] gi|219679587|gb|EED35936.1| hypothetical protein NOR51B_1884 [gamma proteobacterium NOR51-B] Length = 188 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 ++ + I GG+R G ++K++ LGA+ + P+L +A VA A+ LR+E Sbjct: 104 DQLELIVDGGIRRGTHVIKALALGANACSIGRPYLYGLGAGGEAGVAHALSLLREEVERG 163 Query: 316 MFLLGTKRVQEL 327 M LLG + V EL Sbjct: 164 MALLGCRSVAEL 175 >gi|296827054|ref|XP_002851109.1| cytochrome b2 [Arthroderma otae CBS 113480] gi|238838663|gb|EEQ28325.1| cytochrome b2 [Arthroderma otae CBS 113480] Length = 503 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 82/355 (23%), Positives = 140/355 (39%), Gaps = 68/355 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK FD R L + EV+ + + LG +S PL ++ + M++ I+ + Sbjct: 157 DANKSSFDRIWFRPRVLRNVR--EVNTTSKILGSSVSMPLFVAP-----SAMVKLIHPDG 209 Query: 80 AIAAEKTKVAMAVGSQRVM--FSDHNAIKSFELRQYAPHTVLI----------------- 120 + +A A ++ +M S++ + E+ + AP+T I Sbjct: 210 ELG-----IARACEAKGIMQGISNNASFSLKEISEAAPNTKFIFQLYVNRERAKSAAQLR 264 Query: 121 -----SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN------TNF 168 S + A+ + D +A + AD L L + P + G F Sbjct: 265 ECSANSQIKAICITVDAAWPGKREADERVKADENLSLPMVPAKGNNDKKGGGLGRVMAGF 324 Query: 169 ADLSSKIALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D L A +PLLLK V S+ D + +++GI ++ GG Sbjct: 325 IDPGLTWEDLKWARQHTHLPLLLKGVQ---SADDAMMAMEAGIDGIMLSNHGG------- 374 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLG 284 R+L++ + T L L P + + G+R G DILK++ LGA+ Sbjct: 375 --RNLDTSPASII------TLLELHRRCPEIFDRMEIYVDSGIRRGTDILKAVCLGATAV 426 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 G+ FL + + V I+ +R E +M +G + + Y+NTA I H Sbjct: 427 GMGRSFLFASNYGQEGVEHLIDIMRDELEGAMRNIGITSLDQAGPQYVNTADIDH 481 >gi|238611279|ref|XP_002397930.1| hypothetical protein MPER_01560 [Moniliophthora perniciosa FA553] gi|215473421|gb|EEB98860.1| hypothetical protein MPER_01560 [Moniliophthora perniciosa FA553] Length = 129 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEF 312 P N A F+ GG+R D LK++ LGAS G+ FL + V AI+ LR EF Sbjct: 44 PNPNFAVFV-DGGVRRASDALKALALGASAVGVGRGFLYAFCSYGQEGVEKAIQILRDEF 102 Query: 313 IVSMFLLGTKRVQEL 327 ++M LLG + + EL Sbjct: 103 EMNMRLLGARSLSEL 117 >gi|148230794|ref|NP_001082500.1| hypothetical protein LOC398510 [Xenopus laevis] gi|49115931|gb|AAH73662.1| LOC398510 protein [Xenopus laevis] Length = 356 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S ++P+++K + L+ D EL + G++ ++ GG R L+ ++ Sbjct: 213 ICWLRSVTNLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGG---------RQLDGEL 260 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + LS E+ + GG+R G D+LK+I LGA L P + Sbjct: 261 ATI-------DALS-EIVEVVQGRIEVYLDGGIRTGSDVLKAIALGAKCVFLGRPIVWGL 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V ++ L EF +SM L G + + E+ N Sbjct: 313 TYKGEEGVKGILQILTDEFRLSMALSGCRNISEVNRN 349 >gi|198418143|ref|XP_002119255.1| PREDICTED: similar to LOC100101335 protein [Ciona intestinalis] Length = 371 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 40/331 (12%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F + L L ++S +V+ LG + FP+ I+S NKM I Sbjct: 39 NCNAFSRYRLRPHVLNDVS--KVNLGSSVLGTPIDFPVCIAST--AMNKMAHPTGE---I 91 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A K +M +G + + A S E + AP + L + N + Q +A Sbjct: 92 AVVKAAESMKIGYMQSTW----ATTSVEDITAAAPGAIRWLQL-YIYKNREVTKQLVQRA 146 Query: 141 VHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSKIALLS-SAMDVPLLLK---EVGCGL 195 LG G+FL ++ P+ + NF+ L S ++L + A+D+ L E G GL Sbjct: 147 -ERLGYQGIFLTVDTPILGKRYKDVKNNFS-LPSHLSLENFKALDLKELHTVDGENGSGL 204 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRI---------ESHRDLESDI-GIVFQDWG--- 242 + M L + +++ DIA + I + R ++ ++ GI+ + G Sbjct: 205 AQMVAAL-IDPSLQWSDIAWLKTITSMPIVLKGIITGEMAKRAVKENVAGILVSNHGARQ 263 Query: 243 ---IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 +P + E+ + + + GG+RNG D++K+I GA + P L A + Sbjct: 264 LDGVPATIDALREIVQAVDGKCEVYLDGGVRNGTDVIKAIAFGAKAVFIGRPVLWGLAHN 323 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++ LR+EF ++ L+G ++EL Sbjct: 324 GQEGVRHVLKMLREEFKTALQLMGCTSIEEL 354 >gi|240281450|gb|EER44953.1| cytochrome b2 [Ajellomyces capsulatus H143] gi|325092054|gb|EGC45364.1| cytochrome b2 [Ajellomyces capsulatus H88] Length = 513 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQSRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G + +L Sbjct: 451 EMVMNMRLIGCSNIGQL 467 >gi|226290453|gb|EEH45937.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 473 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + GG++ G D++K++ LGA G+ +P Sbjct: 349 DTAPPAVHTLMEIRKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARCVGVGRAPLFGLG 408 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG RV++L ++N + Q Sbjct: 409 AGGVEGVERVLEILSSETKTAMHLLGVGRVEDLGMQHINARAVEQQ 454 >gi|157736976|ref|YP_001489659.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri RM4018] gi|157698830|gb|ABV66990.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri RM4018] Length = 358 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%) Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPT----PLSLEM----ARPYCNEAQFIASGGL 267 +G TS S + DL D GIV + G T P S+E+ A+ + + GG+ Sbjct: 232 KGITSVSYAKKALDLGID-GIVVSNHGGRTLDTLPASIELLPKIAKVINKKIPILFDGGI 290 Query: 268 RNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+LK+I LGA+ + P + A + V ++ L++E VSM G K +Q Sbjct: 291 RRGTDVLKAIALGANAVLIGRPIIYGLATAGALGVAHTLKILKEELEVSMIFTGCKDIQS 350 Query: 327 L 327 + Sbjct: 351 I 351 >gi|86357474|ref|YP_469366.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86281576|gb|ABC90639.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 395 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG+R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIAASVGDSIAVMIDGGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG RV ++ Sbjct: 359 PGVLRAADILKAELHSNMALLGVTRVTDI 387 >gi|223997212|ref|XP_002288279.1| l-lactate dehydrogenase [Thalassiosira pseudonana CCMP1335] gi|220975387|gb|EED93715.1| l-lactate dehydrogenase [Thalassiosira pseudonana CCMP1335] Length = 431 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + I GG++ G DI K++ LGA G+ P+L A ++ V+ A + L+ E +M Sbjct: 328 DVEIILDGGVQRGTDICKALALGADSVGVGKPYLYGLAAGGTEGVIKAYDILKVELDRAM 387 Query: 317 FLLGTKRVQEL 327 LLG V EL Sbjct: 388 GLLGAGTVDEL 398 >gi|118093567|ref|XP_421985.2| PREDICTED: similar to phosphodiesterase 11A [Gallus gallus] Length = 886 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 688 HFNHAVMILQSEGHNIFANLSSK-----DYSDLMQLLKQ---SILATDLTLYFERRTEFF 739 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ G+GG W+ +++HR++ D+G V + W I Sbjct: 740 ELVGKGGYDWN-VKNHREIFRSMLMTACDLGAVTKPWEI 777 >gi|15889595|ref|NP_355276.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15157485|gb|AAK88061.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 382 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL V A+E +RKE +SM L G + Sbjct: 313 GGIRSGQDVLKAVALGARGTYIGRPFLYGLGAGGKQGVTTALEIIRKELDISMALCGKRL 372 Query: 324 VQEL 327 + ++ Sbjct: 373 ITDV 376 >gi|148695256|gb|EDL27203.1| mCG127686, isoform CRA_b [Mus musculus] Length = 805 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 16/104 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 706 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 757 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLS 248 ++ +G WS I SHRD+ D+G V + W I LS Sbjct: 758 ELVRKGDYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEISRQLS 800 >gi|315040323|ref|XP_003169539.1| hypothetical protein MGYG_08444 [Arthroderma gypseum CBS 118893] gi|311346229|gb|EFR05432.1| hypothetical protein MGYG_08444 [Arthroderma gypseum CBS 118893] Length = 495 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + + GG+R DILK++ LGA G+ PFL AM + + V A++ L+ Sbjct: 382 ARGWDRKIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTAGVEKAMQLLK 440 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 441 DEMEMNMRLLGCTSIDQL 458 >gi|218463061|ref|ZP_03503152.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli Kim 5] Length = 324 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 252 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVTLALGIIRKEMDITMALCGKR 310 Query: 323 RVQELYLNTALIRHQ 337 + + +NT++I Q Sbjct: 311 DIND--VNTSIISRQ 323 >gi|299117207|emb|CBN75171.1| Glycolate Oxidase (2-Hydroxyacid Oxidase) [Ectocarpus siliculosus] Length = 386 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 S IA L S +P+L+K + L++ D +++G ++ GG + S +ES Sbjct: 226 SDIAWLKSLTSLPILVKGI---LTAQDAVSAVEAGASGVIVSNHGGRALD--GSLSSIES 280 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FL 291 +V +PT ++ + F+ SG +R G D+LK++ LGA+ L P F Sbjct: 281 LAPVVKAVRSVPTGANVPI---------FLDSG-VRRGTDVLKALALGATAVLLGRPMFF 330 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V + +R E +M L G +R+Q++ Sbjct: 331 SLAVGGQEGVQRMLSIIRDELEAAMALCGCQRLQDI 366 >gi|71279855|ref|YP_268633.1| glutamate synthase domain-containing protein [Colwellia psychrerythraea 34H] gi|71145595|gb|AAZ26068.1| glutamate synthase domain protein [Colwellia psychrerythraea 34H] Length = 515 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 94/259 (36%), Gaps = 57/259 (22%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL PL +S M+ G +E+ K+A+A G++ + + Sbjct: 182 KLRIPLFVSDMSFG-------------ALSEEAKIALATGAELAGTGICSGEGGMLPEEQ 228 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEI---------- 159 A ++ L + Q YD K QA H G G HL ++ I Sbjct: 229 AANSKYFYELASAQFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGIKNIGKIAKVRGIE 288 Query: 160 -----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGI 208 I P F DL + A V + + G DI+ L + Sbjct: 289 AGTSAISP---PTFKDLITVEDFKKFANRVREVTGGIPIGFKLSANHIEEDIQFALDASA 345 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFI 262 Y + GRGG + + E RD S +PT +L AR Y +E I Sbjct: 346 DYIILDGRGGGTGAAPEIFRDHIS----------VPTIPALARARKYLDEQGANGRVTLI 395 Query: 263 ASGGLRNGVDILKSIILGA 281 +GGLR +D +K++ LGA Sbjct: 396 ITGGLRVPIDFVKALALGA 414 >gi|156544048|ref|XP_001604745.1| PREDICTED: similar to (s)-2-hydroxy-acid oxidase [Nasonia vitripennis] Length = 367 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A L S +P++LK + L+ D LG++SG ++ GG R L++ Sbjct: 221 VAWLKSVTKLPIVLKGI---LTPEDAVLGVESGASAIFVSNHGG---------RQLDN-- 266 Query: 235 GIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 TP +LE +A+ ++A+ GG+ G D+ K++ LGA + + Sbjct: 267 ----------TPATLEVLAGIAKAVGDKAEVYVDGGVTRGTDVFKALALGARMVFVGRSM 316 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A D + +E LR+E + L G V+++ Sbjct: 317 LWGLACDGERGARSVLEILREEVEQTFALTGCSSVKQV 354 >gi|312621372|ref|YP_004022985.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] gi|312201839|gb|ADQ45166.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] Length = 338 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 46/298 (15%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN--LAIAAEKTKVAMAVGSQRVMFS 100 E D VE GKKL+ P+L + +TG + M +I+ + + +K A +G M Sbjct: 67 EPDICVEMFGKKLAMPILAAPITGSSYNMGGKISEEDFIQMVISGSKEAGTIG----MCG 122 Query: 101 DHNAIKSFE-----LRQYAPHTVLI----SNLGAVQLNYDFGVQKAHQA-VHVLGADGLF 150 D +E +R H + I SN ++ +++A A +G D Sbjct: 123 DGGDPVFYESGLKAIRNENGHGIAIIKPRSNDQIIKR-----IKEAEDAGALAVGIDIDG 177 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 L + + QP G +L AL+SS+ +P +LK + ++ + E+ L+ G Sbjct: 178 AGLITMALMGQPIGPKTKEELK---ALISSS-SLPFILKGI---MTEDEAEIALEVGASA 230 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG RI H +++ +P +A + A GG+R+G Sbjct: 231 IVVSNHGG----RILDHTPGVAEV--------LP-----RIAEKVKGKILIFADGGVRSG 273 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 VD+LK + LGA + P + A + V +E + +E +M L G K ++ + Sbjct: 274 VDVLKYLALGADAVLVGRPIIHAAFGGGKEGVKLILEKMAQELKQAMILTGCKDIKSI 331 >gi|46109298|ref|XP_381707.1| hypothetical protein FG01531.1 [Gibberella zeae PH-1] Length = 383 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 31/157 (19%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L +P+++K +G S+ D +L ++ G ++ GG R L+ Sbjct: 237 LQKMTKLPVVIKGIG---SAADAKLAVQHGAPAIILSNHGG---------RQLDG----- 279 Query: 238 FQDWGIPTPLSLEMARPYCNEA-------QFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P LE+A EA + A GG+R G D+LK + LG GL PF Sbjct: 280 -------SPSGLEVALEIHEEAPEVFKKIEVYADGGVRYGADVLKLLSLGVKAVGLGRPF 332 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + D V I+ L+ E + LG +Q++ Sbjct: 333 MYANVFGVDGVKKVIDILKHEIAIDAGNLGVPDIQKI 369 >gi|113476028|ref|YP_722089.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Trichodesmium erythraeum IMS101] gi|110167076|gb|ABG51616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Trichodesmium erythraeum IMS101] Length = 359 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 N+ + GG+R G DILK++ LGA + P L A++ V +E LR E V+ Sbjct: 282 NKVDVLMDGGIRRGTDILKALALGAKAVLIGRPVLWALAVNGETGVHHLLELLRNELDVA 341 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L G +V+ +N +L+R Sbjct: 342 MALSGCAKVEN--INPSLVR 359 >gi|312137325|ref|YP_004004662.1| glutamate synthase (nadph) gltb2 subunit [Methanothermus fervidus DSM 2088] gi|311225044|gb|ADP77900.1| glutamate synthase (NADPH) GltB2 subunit [Methanothermus fervidus DSM 2088] Length = 499 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 44/253 (17%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L P++I++M+ G +I LA+ A A G + M + S + QY Sbjct: 161 ELDTPIMIAAMSFGAISKEAKIA--LAMGATLAGTATNTG-EGGMLPEERKYASKLIAQY 217 Query: 114 APHTVLIS-----NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 A +S N A+++ G KA H+LG + + + ++ I P G Sbjct: 218 ASGRFGVSAEYLNNADAIEIKIGQGA-KAGMGGHLLG-EKVVAEVAEIRMI--PEGTDAL 273 Query: 169 A-----------DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + DLS KI+ L D VP+++K G S D+++ K+G + G Sbjct: 274 SPARHMDIVGPEDLSMKISQLREITDWKVPIIVKFTS-GRVSDDVKIAAKAGADIVVVDG 332 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLR 268 +GGT + +V + GIPT ++ A +E +A+GG+R Sbjct: 333 MQGGTG-----------AGPDVVTEHAGIPTIAAIVEADEALKEINLRDEVSLVAAGGIR 381 Query: 269 NGVDILKSIILGA 281 +G D+ K+I LGA Sbjct: 382 SGADVAKAIALGA 394 >gi|261206476|ref|XP_002627975.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239593034|gb|EEQ75615.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239610792|gb|EEQ87779.1| cytochrome b2 [Ajellomyces dermatitidis ER-3] gi|327350324|gb|EGE79181.1| cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 509 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 22/157 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L++ + Sbjct: 334 LPLVLKGV---MSADDAILAMKAGLDGILLSNHGG---------RNLDTSPPALV----- 376 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 T L L P ++ + GG+R G DILK++ LGA+ G+ L A + V Sbjct: 377 -TLLELHKRCPEIFDKMEIYVDGGIRRGTDILKAVCLGATAVGMGRSVLFSANYGQEGVE 435 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + ++ E +M L+G ++E ++NT I H Sbjct: 436 HLFDIMKDELEGAMRLVGITSLEETHPGFVNTGDIDH 472 >gi|296818911|ref|XP_002849777.1| cytochrome b2 [Arthroderma otae CBS 113480] gi|238840230|gb|EEQ29892.1| cytochrome b2 [Arthroderma otae CBS 113480] Length = 500 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLR 309 AR + + + GG+R DI+K++ LGA G+ PFL AM + ++ V A++ L+ Sbjct: 381 ARGWERKIEVYIDGGIRRASDIIKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLK 439 Query: 310 KEFIVSMFLLGTKRVQEL 327 E ++M LLG + +L Sbjct: 440 DEMEMNMRLLGCTSIDQL 457 >gi|302908819|ref|XP_003049936.1| hypothetical protein NECHADRAFT_48632 [Nectria haematococca mpVI 77-13-4] gi|256730873|gb|EEU44223.1| hypothetical protein NECHADRAFT_48632 [Nectria haematococca mpVI 77-13-4] Length = 467 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 33/184 (17%) Query: 157 QEIIQPNGNTNFADLS-SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 Q+ P ADL+ I + ++P+L+K V S+ D + GL G ++ Sbjct: 290 QQAPTPANTIIDADLNWQDIKWIRDTTNLPVLIKGVQ---SAEDAKQGLAIGCAGIYLSN 346 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGV 271 GG + D P L L + C E + + GG R G Sbjct: 347 HGGRAL------------------DAAPPATLVLLEIQKTCPEILKQMEVVVDGGFRRGS 388 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---Y 328 ++LK+I LGA++ L PFL + + L++E +M LLG +++ Y Sbjct: 389 EVLKAICLGATVVCLGRPFLYALAYGEEGAIL----LKEELKTAMQLLGVVNLKQADLGY 444 Query: 329 LNTA 332 LNT+ Sbjct: 445 LNTS 448 >gi|171690308|ref|XP_001910079.1| hypothetical protein [Podospora anserina S mat+] gi|170945102|emb|CAP71213.1| unnamed protein product [Podospora anserina S mat+] Length = 498 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMF 317 + GG+R DI+K++ LGA G+ PFL AM + + V A++ L+ E ++M Sbjct: 390 EVYVDGGVRRATDIIKALCLGAKGVGIGRPFLY-AMSAYGQEGVERAMQLLKDEMEMNMR 448 Query: 318 LLGTKRVQEL 327 L+G + ++EL Sbjct: 449 LIGARTIEEL 458 >gi|169617465|ref|XP_001802147.1| hypothetical protein SNOG_11912 [Phaeosphaeria nodorum SN15] gi|111059836|gb|EAT80956.1| hypothetical protein SNOG_11912 [Phaeosphaeria nodorum SN15] Length = 493 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 28/169 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L + +P++ K V ++ D L +K G+ I GG R+L Sbjct: 324 IKWLRKSTQLPIVAKGVQ---TAEDAVLAMKYGLDGIVITNHGG---------RNL---- 367 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPF 290 D P+ L+L R + E + G+R G DI+K++ LGA G+ PF Sbjct: 368 -----DTSPPSLLTLLEIRKHHPEVFRHLEVYIDCGIRRGTDIVKALCLGAKAVGMGRPF 422 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 L + V I+ ++ E +M LLG + + YLN + H Sbjct: 423 LYSLTYGQEGVEHFIDIMKDELETTMRLLGITDLSQCHPRYLNIGDVEH 471 >gi|70991238|ref|XP_750468.1| mitochondrial cytochrome b2 [Aspergillus fumigatus Af293] gi|66848100|gb|EAL88430.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus Af293] gi|159130941|gb|EDP56054.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus A1163] Length = 471 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 R YC E GG+R G D++K++ LGA G+ P L D V ++ Sbjct: 386 RKYCPEVFDKLDVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLGAGGVDGVKRTLQI 445 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L E M LLG +RV++L Sbjct: 446 LADETKTCMRLLGVERVEDL 465 >gi|315636170|ref|ZP_07891424.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri JV22] gi|315479531|gb|EFU70210.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri JV22] Length = 358 Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%) Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPT----PLSLEM----ARPYCNEAQFIASGGL 267 +G TS S + DL D GIV + G T P S+E+ A+ + + GG+ Sbjct: 232 KGITSVSYAKKALDLGID-GIVVSNHGGRTLDTLPASIELLPKIAKVINKKIPILFDGGV 290 Query: 268 RNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+LK+I LGA+ + P + A + V ++ L++E VSM G K +Q Sbjct: 291 RRGTDVLKAIALGANAVLIGRPIIYGLATAGALGVAHTLKILKEELEVSMIFTGCKDIQS 350 Query: 327 L 327 + Sbjct: 351 I 351 >gi|302653396|ref|XP_003018525.1| FMN-dependent dehydrogenase family protein [Trichophyton verrucosum HKI 0517] gi|291182176|gb|EFE37880.1| FMN-dependent dehydrogenase family protein [Trichophyton verrucosum HKI 0517] Length = 421 Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R DILK++ LGA G+ PFL AM + ++ V A++ L+ E ++M LLG Sbjct: 317 GGVRRATDILKAVCLGAKGVGIGRPFLY-AMSAYGTEGVEKAMQLLKDEMEMNMRLLGCT 375 Query: 323 RVQEL 327 + +L Sbjct: 376 SIDQL 380 >gi|78050047|ref|NP_001030243.1| hydroxyacid oxidase 2 [Bos taurus] gi|122140840|sp|Q3ZBW2|HAOX2_BOVIN RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal gi|73587057|gb|AAI03071.1| Hydroxyacid oxidase 2 (long chain) [Bos taurus] gi|296489459|gb|DAA31572.1| hydroxyacid oxidase 2 [Bos taurus] Length = 353 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 210 LSWFQSMTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEV 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA + P L Sbjct: 267 VAAVK-----------------GKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGL 309 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V ++ L+ EF SM L G + V E+ Sbjct: 310 AYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEI 343 >gi|148978052|ref|ZP_01814599.1| glutamate synthase domain protein [Vibrionales bacterium SWAT-3] gi|145962736|gb|EDK28010.1| glutamate synthase domain protein [Vibrionales bacterium SWAT-3] Length = 408 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 96/259 (37%), Gaps = 57/259 (22%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PL +S M+ G+ +E+ KV++A G++ + + Sbjct: 70 KLNIPLFVSDMSFGS-------------LSEEAKVSLATGAELAGTGICSGEGGMLPEEQ 116 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEI---------- 159 A ++ L + Q YD K QA H G G HL ++ I Sbjct: 117 AANSRYFYELASAQFGYDEAKLKNVQAFHFKGGQGAKTGTGGHLPGVKNIGKIAEVRGIE 176 Query: 160 -----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGI 208 I P F DL + A V + + G DI+ L + Sbjct: 177 AGTAAISP---PTFKDLKTSADFKKFADCVREVTGGIPIGFKLSANHIEEDIQFALDASA 233 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFI 262 Y + GRGG + + E RD S +PT +L AR Y ++ I Sbjct: 234 DYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKQGVSDRVTLI 283 Query: 263 ASGGLRNGVDILKSIILGA 281 +GGLR +D +K++ LGA Sbjct: 284 ITGGLRVPMDFVKAMALGA 302 >gi|119483932|ref|XP_001261869.1| (S)-2-hydroxy-acid oxidase [Neosartorya fischeri NRRL 181] gi|119410025|gb|EAW19972.1| (S)-2-hydroxy-acid oxidase [Neosartorya fischeri NRRL 181] Length = 342 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 25/161 (15%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D + I L + + LK + S D+EL + G+ I+ GG R Sbjct: 187 DWETTIPWLRKHTSLQIWLKGI---CSPADVELAIHYGVDGIVISNHGG---------RQ 234 Query: 230 LESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLGGLA 287 L+ GIP L +L + P +A GG+R G DI K++ LGAS + Sbjct: 235 LD----------GIPATLDALRLCAPIARGRIPLAIDGGIRRGSDIFKALALGASYCFVG 284 Query: 288 S-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P A + + V AI LR+E ++M L G + ++ Sbjct: 285 RIPIWGLAYNGQEGVELAIRILRQELKITMALAGCTSISDI 325 >gi|218133502|ref|ZP_03462306.1| hypothetical protein BACPEC_01369 [Bacteroides pectinophilus ATCC 43243] gi|217990877|gb|EEC56883.1| hypothetical protein BACPEC_01369 [Bacteroides pectinophilus ATCC 43243] Length = 337 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 41/313 (13%) Query: 26 FDDWHLIHRALPEI-SFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKMIERINRN--L 79 +D W I + I S VD S+ GK+ +P + N ++ + N L Sbjct: 49 YDKWKEIRLNMDTIVSNRPVDTSISLFGKEFKYPFFAGPVGAVNLHYGDSLDDVAYNDIL 108 Query: 80 AIAAEKTKVAMAVG---SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A +A G + VM + +AIK+ + R TV N+ ++ + Sbjct: 109 VSACADAGIAAFTGDGTNPGVMEAATDAIKNAKGRGI--PTVKPWNIDTIRDKMELVRNS 166 Query: 137 AHQAVHV-LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 AV + + A GL L+ + P G+ + +LS + A + P ++K + Sbjct: 167 GAFAVAMDIDAAGLPF----LKNMTPPAGSKSVEELSE----IVKAANAPFIVKGI---- 214 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 M ++ LK A G S + +H G V + E+ + Sbjct: 215 --MTVKGALK--------AKEAGASAIVVSNHG------GRVLDQCPATAEVLEEIVKAV 258 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIV 314 + GG+R+G D+LK+I LGA +A PF+ + V+A I+ + E Sbjct: 259 DGSMKIFVDGGIRSGADVLKAIALGADAVIIARPFVTAVYGGEHEGVLAYIDKIGSELKD 318 Query: 315 SMFLLGTKRVQEL 327 +M + G + E+ Sbjct: 319 AMAMCGAASISEI 331 >gi|18266694|ref|NP_543169.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 4 [Rattus norvegicus] gi|81871503|sp|Q8VID6|PDE11_RAT RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; AltName: Full=cAMP and cGMP phosphodiesterase 11A gi|18143353|dbj|BAB79629.1| phosphodiesterase 11A4 [Rattus norvegicus] Length = 935 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 789 ELVSKGAYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 826 >gi|15679660|ref|NP_276777.1| glutamate synthase (NADPH), alpha subunit related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622795|gb|AAB86138.1| glutamate synthase (NADPH), alpha subunit related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 383 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 26/276 (9%) Query: 26 FDDWHLIHRALPEISFDEVDP--SVEFLGK------KLSFPLLISSMTGGNNKMIERINR 77 DD H + + +I + DP + +G +L P++IS M+ G + E+ Sbjct: 43 LDDLHFLPAQVSKIPLNAEDPVKTDVIIGPESKRPLRLKSPIIISGMSYG--AVSEKTRI 100 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGAVQLNYDFGV 134 +A A++ K+ G V+ + + + QY+ I+ GA + FG Sbjct: 101 AIASVADRLKIGFNSGEGGVLQRELEKAGDYLIIQYSTGRFGITEDVLRGAAAIEIRFGQ 160 Query: 135 QKAHQAVHVLGADGL------FLHLNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDVP 185 L D + L P + P + + D L K+ L Sbjct: 161 GAYPGKGSYLPPDKISPDVARVRGLAPGEGSYSPAHHHDIRDQMELEEKVKELRKMSGGA 220 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + ++GCG D++ L +G+ + + G GG + + + H + + GI IP Sbjct: 221 PIGAKIGCGNVEDDVKALLDAGVDFISLDGFGGGTGA-VNPH--IRDNTGIPLI-AAIPR 276 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + + + IA GGLR D+ K + LGA Sbjct: 277 AVKTVINEGHGDRVSLIAGGGLRTAADMAKCLALGA 312 >gi|60593513|pdb|1TB3|A Chain A, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593514|pdb|1TB3|B Chain B, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593515|pdb|1TB3|C Chain C, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593516|pdb|1TB3|D Chain D, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593517|pdb|1TB3|E Chain E, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593518|pdb|1TB3|F Chain F, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593519|pdb|1TB3|G Chain G, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593520|pdb|1TB3|H Chain H, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|238482|gb|AAB20262.1| long chain alpha-hydroxy acid oxidase=FMN-dependent alpha-hydroxy acid-oxidizing enzyme {EC 1.1.3.15} [rats, kidney, Peptide, 352 aa] Length = 352 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 25/167 (14%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P + + DLS LL S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 200 PKASFCWNDLS----LLQSITRLPIILKGI---LTKEDAELAMKHNVQGIVVSNHGGRQL 252 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D ++ + + + GG+R G D+LK++ LGA Sbjct: 253 DEVSASIDALREVVAAVK-----------------GKIEVYMDGGVRTGTDVLKALALGA 295 Query: 282 SLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P L A D V ++ L E M L G + V E+ Sbjct: 296 RCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEI 342 >gi|14091775|ref|NP_114471.1| hydroxyacid oxidase 2 [Rattus norvegicus] gi|4033693|sp|Q07523|HAOX2_RAT RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Long chain alpha-hydroxy acid oxidase; AltName: Full=Long-chain L-2-hydroxy acid oxidase gi|311833|emb|CAA47629.1| (S)-2-hydroxy-acid oxidase [Rattus norvegicus] gi|50925465|gb|AAH78781.1| Hao2 protein [Rattus norvegicus] gi|149030520|gb|EDL85557.1| hydroxyacid oxidase 2 (long chain) [Rattus norvegicus] Length = 353 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 25/167 (14%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P + + DLS LL S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 201 PKASFCWNDLS----LLQSITRLPIILKGI---LTKEDAELAMKHNVQGIVVSNHGGRQL 253 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D ++ + + + GG+R G D+LK++ LGA Sbjct: 254 DEVSASIDALREVVAAVK-----------------GKIEVYMDGGVRTGTDVLKALALGA 296 Query: 282 SLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P L A D V ++ L E M L G + V E+ Sbjct: 297 RCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEI 343 >gi|301786062|ref|XP_002928444.1| PREDICTED: hydroxyacid oxidase 2-like [Ailuropoda melanoleuca] Length = 353 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 21/155 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 210 LSWLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVPASIDALTEV 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 267 VAAVK-----------------GKMEVYLDGGIRTGNDVLKALALGAKCVFLGRPILWGL 309 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A V + ++ EF SM L G + V E++ Sbjct: 310 AYKGEHGVEEVLNLIKNEFHTSMTLTGCRSVAEIH 344 >gi|310792133|gb|EFQ27660.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 497 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIV 314 N + GG+R DI+K++ LGA G+ PFL AM D V A++ LR E + Sbjct: 382 NAIEIYIDGGVRRATDIIKALCLGAKGVGIGRPFLY-AMSGYGFDGVDRAMQLLRDEMEM 440 Query: 315 SMFLLGTKRVQELYLNTALI 334 +M L+G V + LN +L+ Sbjct: 441 NMRLIGCTSVDQ--LNPSLV 458 >gi|262395567|ref|YP_003287420.1| glutamate synthase [NADPH] large chain [Vibrio sp. Ex25] gi|262339161|gb|ACY52955.1| glutamate synthase [NADPH] large chain [Vibrio sp. Ex25] Length = 466 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 104/280 (37%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 132 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 178 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + Q YD QA H G G HL + + + P Sbjct: 179 AANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 238 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L +G Y Sbjct: 239 EGQPAISPPTFKDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDAGADYI 298 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 299 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 348 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA G+A AM S V A I Sbjct: 349 GLRVPMDFVKALALGAD--GVA--IANSAMQSIGCVAARI 384 >gi|315039133|ref|YP_004032701.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1112] gi|312277266|gb|ADQ59906.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1112] Length = 409 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 70/342 (20%), Positives = 132/342 (38%), Gaps = 71/342 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL ++ + D EF+G KL P++IS + +++ + Sbjct: 54 NTSAFNHYQIVPRALTDMDDPQTD--TEFMGMKLKTPIMISPIACHG-----IAHKDAEV 106 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A +K A A G+ + S A KS E + AP L + ++DF + A Sbjct: 107 ATQKG--AAAAGA--LFSSSTYANKSVEDIAAAAPEAPRFFQL-YLSKDWDFN-KMVFDA 160 Query: 141 VHVLGADGLFLHLNPL--------------------------------QEIIQPNGNTNF 168 + +G G+FL ++ L Q + Q ++ Sbjct: 161 IKKVGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVAQMYASSAQ 220 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +A + +P+ +K V C + D + +G + GG R Sbjct: 221 KIGPEDVARIKKESGLPVFVKGVMC---AEDAYKAIGAGADGIYVTNHGG---------R 268 Query: 229 DLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 +++ G P + + E+A+ + + G+R G + K++ LGA + G+ Sbjct: 269 EVD----------GAPATIDVLPEIAKAVNHRVPIVFDSGVRRGSHVFKALALGADIVGI 318 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P+L A+ V + I L E + M L G K + ++ Sbjct: 319 GRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDV 360 >gi|303317920|ref|XP_003068962.1| FMN-dependent dehydrogenase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240108643|gb|EER26817.1| FMN-dependent dehydrogenase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039031|gb|EFW20966.1| glycolate oxidase [Coccidioides posadasii str. Silveira] Length = 388 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 81/386 (20%), Positives = 140/386 (36%), Gaps = 103/386 (26%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 ND D I + N F + + R L ++S + PSVE LG+K++FP+ I+ Sbjct: 47 NDGSTDQITV-------RENSTAFLKYRIRPRVLVDVS--QCCPSVECLGRKVAFPVGIA 97 Query: 63 SMTG---------GNNKMIERINRNLAI-------------------------------- 81 ++ R N+AI Sbjct: 98 PTVQFIAHPDAEIATSRACARKGINMAIGSLASNTVKDICDAGKSVDSNMTYAMQMYPFK 157 Query: 82 ----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 AA+ K A A G + V + + R++ + S G + + +A Sbjct: 158 NRIMAAKLIKEAEAQGCKAVFLTADSPTLGVRYREWKDDFRIPSEQGFPNIGWTVERLRA 217 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 Q+ +G D L + + N+A IA S + + +K V L++ Sbjct: 218 -QSNDSVGQDTL-------------DDSQNWA---RDIAWFKSQTKMEIWIKGV---LTA 257 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + ++ G ++ GG R L+ G+P + A P C Sbjct: 258 EDTQKAVEMGCHGIIVSNHGG---------RQLD----------GVPATID---ALPECV 295 Query: 258 EA-----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKE 311 +A + GG+R G DI K+I LGA L P L A D + ++ L + Sbjct: 296 KAANGRLKVHIDGGIRTGSDIFKAIALGAECCWLGRPALWALAYDGEKGMDLMLQVLYDD 355 Query: 312 FIVSMFLLGTKRVQELYLNT-ALIRH 336 F+ M L G + ++++ + ++RH Sbjct: 356 FVRCMKLAGCQTIKDITKASLGVVRH 381 >gi|238506337|ref|XP_002384370.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] gi|220689083|gb|EED45434.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] Length = 385 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Query: 242 GIPTPLSL-----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G P+PL + E A + + A GG+R G D+LK + LG GL PF+ Sbjct: 281 GTPSPLEIALEIHEEAPELFEQIEIYADGGVRYGADVLKLLALGVRAVGLGRPFMFANTY 340 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V AI+ L+ E + LG +++L Sbjct: 341 GVEGVKHAIQLLKHEIAIDAGNLGVGDLKKL 371 >gi|58261620|ref|XP_568220.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115799|ref|XP_773613.1| hypothetical protein CNBI2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256239|gb|EAL18966.1| hypothetical protein CNBI2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230302|gb|AAW46703.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 514 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESL 308 M P + GG+R D+LK++ LGA+ G+ P + AM + D V A++ L Sbjct: 401 MNNPLRPRFEIFVDGGVRRATDVLKAVALGATAVGIGRPMIY-AMSTYGKDGVSHALQIL 459 Query: 309 RKEFIVSMFLLG 320 + EF ++M LLG Sbjct: 460 KDEFEMNMRLLG 471 >gi|255956049|ref|XP_002568777.1| Pc21g17810 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590488|emb|CAP96678.1| Pc21g17810 [Penicillium chrysogenum Wisconsin 54-1255] Length = 455 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 18/108 (16%) Query: 248 SLEMARP----------YCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 SL+ ARP YC E + GG++ G D++K++ LGA G+ L Sbjct: 329 SLDTARPAVHTMLEIRKYCPEVFDKIEVWVDGGIKRGTDVVKALCLGARGVGIGRAALWG 388 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 D V ++ L +E M LLG K + EL ++NT L+ Q Sbjct: 389 LGAGGVDGVKRTLQILTEETKTCMRLLGAKNIDELGKQHINTRLVEKQ 436 >gi|78044740|ref|YP_360153.1| FMN-dependent family dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77996855|gb|ABB15754.1| dehydrogenase, FMN-dependent family [Carboxydothermus hydrogenoformans Z-2901] Length = 340 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 21/145 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P +LK + ++ + EL +++G + ++ GG + D+ + Sbjct: 207 LPFILKGI---MTPDEAELAVQAGAKAIVVSNHGGRTLDETPGAADV------------L 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 P E+A + +A GG+R+GVD+LK + LGA + P + A ++ V Sbjct: 252 P-----EIAARVKGKITILADGGVRSGVDVLKLLALGADGVLIGRPIIVAAFGGGAEGVK 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E ++KE +M L G RV E+ Sbjct: 307 IYLEKIKKELREAMLLTGVARVTEV 331 >gi|294142238|ref|YP_003558216.1| glutamate synthase [Shewanella violacea DSS12] gi|293328707|dbj|BAJ03438.1| glutamate synthase, putative [Shewanella violacea DSS12] Length = 523 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 57/259 (22%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL PL +S M+ G + E LAI AE + G ++ + Sbjct: 188 KLKIPLFVSDMSFG--ALSEEAKTALAIGAELAGTGICSGEGGML-----------PEEQ 234 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG-------------------LFLHLN 154 A ++ L + Q Y + + QA H G G L + Sbjct: 235 AQNSRYFYELASAQFGYREELLDSIQAFHFKGGQGAKTGTGGHLPGIKNRGKISLVRGIP 294 Query: 155 PLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 Q I P N +F + ++ +S VP+ K + DI+ L + Sbjct: 295 EGQPAISPPTFKELNTPCDFKRFAERVREISGG--VPIGFK-LSANHIERDIQFALDASA 351 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFI 262 Y + GRGG + + E RD S +PT +L AR Y +E I Sbjct: 352 DYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARRYLDEKGVSGKVTLI 401 Query: 263 ASGGLRNGVDILKSIILGA 281 +GGLR +D +K++ LGA Sbjct: 402 ITGGLRVPMDFVKAMALGA 420 >gi|317136807|ref|XP_003189982.1| cytochrome b2 [Aspergillus oryzae RIB40] Length = 402 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 84/353 (23%), Positives = 134/353 (37%), Gaps = 62/353 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK +D L R L + ++V+ LG + PL +S KM+ + L Sbjct: 57 DANKSMYDRILLRPRVLRNV--NKVNTQTTILGCETGLPLFVSP--AAMAKMVHP-DGEL 111 Query: 80 AIA--AEKTKVAMAVGSQ-RVMFSDHNAIKS-----FEL---RQYAPHTVLI-----SNL 123 AIA K V + + SD A F+L R A L+ S + Sbjct: 112 AIARGCAKYGVGQCISTNASYTVSDITACAPGHPFFFQLYINRDRAASEQLLRRVEKSGI 171 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGL-FLHLNPL---QEIIQPNGNT------NFADLS- 172 AV L D V +A +GAD ++ P+ Q + G+ + D S Sbjct: 172 KAVFLTVDAPVAGKREADERVGADASEIIYTAPMTGAQGVGDAKGSALGRTMGRYIDASF 231 Query: 173 --SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG----TSWSRIES 226 + L + +P++LK + ++ D + + G+ ++ GG TS S I Sbjct: 232 TWEDLKWLRRSTSLPIVLKGI---QTAEDALMATEHGVDGIVVSNHGGRSVDTSTSSIAV 288 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ VF+ + GG+R G DI K+I LGA G+ Sbjct: 289 LMEIRQCCPQVFE------------------HLEVFVDGGIRRGTDIFKAICLGAKAVGM 330 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 FL + V IE ++ E +M LLG + + + LNT + H Sbjct: 331 GRQFLYSLTYGQEGVERLIEIMKDELETTMKLLGITDLSQAHPGLLNTLDVDH 383 >gi|115396676|ref|XP_001213977.1| cytochrome b2, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114193546|gb|EAU35246.1| cytochrome b2, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 500 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 320 IPWFQSVTKMPIVLKGVQC---VEDVLRAVEMGVDGVVLSNHGGRQLEFARSAIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 V ++ R + N+ + GG+R D+LK++ LGA G+ PFL A Sbjct: 377 MPVLRE------------RGWENKIEIYIDGGIRRATDMLKALCLGARGVGIGRPFLY-A 423 Query: 295 MDS--SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + V A++ L+ E ++M L+G + +L Sbjct: 424 MSAYGQPGVDRAMQLLKDEMEMNMRLIGATTIADL 458 >gi|315056647|ref|XP_003177698.1| hypothetical protein MGYG_01764 [Arthroderma gypseum CBS 118893] gi|311339544|gb|EFQ98746.1| hypothetical protein MGYG_01764 [Arthroderma gypseum CBS 118893] Length = 492 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 22/157 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PLLLK V S+ D + +++GI ++ GG R+L++ + Sbjct: 331 LPLLLKGV---QSADDAVMAMEAGIDGIMLSNHGG---------RNLDTSPASII----- 373 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 T L L P + + G+R G DILK+I LGA+ G+ FL + + + Sbjct: 374 -TLLELHRRCPEIFDRMEIYIDSGIRRGTDILKAICLGATAVGMGRSFLFASNYGQEGIE 432 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 I+ +R E +M +G + + Y+NTA I H Sbjct: 433 HLIDIMRDELEGAMRNIGITSLDQAGPQYVNTADIDH 469 >gi|225686679|ref|YP_002734651.1| FMN-dependent dehydrogenase [Brucella melitensis ATCC 23457] gi|256043786|ref|ZP_05446708.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. Rev.1] gi|256111169|ref|ZP_05452205.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 3 str. Ether] gi|256262188|ref|ZP_05464720.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260564971|ref|ZP_05835456.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265990213|ref|ZP_06102770.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|265992680|ref|ZP_06105237.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|225642784|gb|ACO02697.1| FMN-dependent dehydrogenase [Brucella melitensis ATCC 23457] gi|260152614|gb|EEW87707.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|262763550|gb|EEZ09582.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|263000882|gb|EEZ13572.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|263091884|gb|EEZ16206.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 2 str. 63/9] Length = 381 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM ++ Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GNE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|254229217|ref|ZP_04922636.1| Glutamate synthase domain 2 [Vibrio sp. Ex25] gi|151938302|gb|EDN57141.1| Glutamate synthase domain 2 [Vibrio sp. Ex25] Length = 513 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 104/280 (37%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 179 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 225 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + Q YD QA H G G HL + + + P Sbjct: 226 AANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 285 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L +G Y Sbjct: 286 EGQPAISPPTFKDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDAGADYI 345 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 346 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 395 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA G+A AM S V A I Sbjct: 396 GLRVPMDFVKALALGAD--GVA--IANSAMQSIGCVAARI 431 >gi|257469395|ref|ZP_05633488.1| FMN-dependent family dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|317063642|ref|ZP_07928127.1| dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313689318|gb|EFS26153.1| dehydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 338 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 122/305 (40%), Gaps = 56/305 (18%) Query: 42 DEVDP--SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D DP + GK+LSFP L + +TG + N + E+ + + G+ Sbjct: 64 DATDPILTTNLWGKELSFPCLGAPITG------TKFNMGGGVTEEEYCLDVIGGA----- 112 Query: 100 SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV---------------QKAHQAVHV- 143 D I + + ++ L A++ N GV + A +A V Sbjct: 113 IDAGTIGM--IGDTGDASCYLAGLEAIKANGGMGVAVIKPRSNEEIIKRIRLAEEAGAVA 170 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +G D L ++ QP G +F ++ L+++ +P ++K + LS + EL Sbjct: 171 VGVDVDGAGLITMKLFGQPVGPKSFEEIKE----LAASTKLPFMIKGI---LSVDEAELC 223 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +K+G+ ++ GG + + D+ DI + ++ + Sbjct: 224 VKAGVDTIVVSNHGGRVLNETLAPCDVVEDI-----------------VKAVGDKINVLV 266 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTK 322 G +R GVDILK I LGA + P ++ V I ++L+ + +M L G K Sbjct: 267 DGSVREGVDILKYIALGAKGVLVGRPLTWGSIGGRQEGVKTIFDTLKGQLTQAMILTGVK 326 Query: 323 RVQEL 327 + ++ Sbjct: 327 DINKV 331 >gi|330468402|ref|YP_004406145.1| aminotransferase [Verrucosispora maris AB-18-032] gi|328811373|gb|AEB45545.1| aminotransferase [Verrucosispora maris AB-18-032] Length = 799 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+AR A + GG+R G D+L ++ LGA+ + P L A+D V + L Sbjct: 267 EVARAVDGAAVVLLDGGVRTGADVLGALALGATAVLVGRPVLHGLAVDGEQGVGEVLRIL 326 Query: 309 RKEFIVSMFLLGTKRVQEL 327 +EF+ SMFL G V + Sbjct: 327 TEEFVESMFLTGLATVAAI 345 >gi|321477409|gb|EFX88368.1| hypothetical protein DAPPUDRAFT_305470 [Daphnia pulex] Length = 351 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I+ L S +P+++K + L D EL ++ G+ ++ GG R L+ Sbjct: 204 ISWLKSITKMPIVVKGI---LRPDDAELAVQHGVAAIAVSNHGG---------RQLD--- 248 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+P + + + + GG+ G D+ K++ LGA + P L Sbjct: 249 -------GVPATIDALPAIVKQVNGRCEVYVDGGITQGTDVFKALALGARMVFFGRPTLW 301 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S +A VV+ I L+KE ++M L G V + ++ +L+ HQ Sbjct: 302 GLAHSGEAGVVSIIRLLKKELDLAMALSGCSSVTD--IDRSLVVHQ 345 >gi|17988722|ref|NP_541355.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. 16M] gi|17984534|gb|AAL53619.1| l-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. 16M] gi|326411071|gb|ADZ68135.1| FMN-dependent dehydrogenase [Brucella melitensis M28] gi|326554362|gb|ADZ89001.1| FMN-dependent dehydrogenase [Brucella melitensis M5-90] Length = 382 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM ++ Sbjct: 286 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GNE 344 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 345 GVTLALEIIRKEMDITMALCGKRDINEI 372 >gi|225555225|gb|EEH03518.1| cytochrome b2 [Ajellomyces capsulatus G186AR] Length = 513 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R G DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQSRIEVYIDGGVRRGTDILKALCLGAKGVGIGRPFLY-AMSAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G + +L Sbjct: 451 ETVMNMRLIGCSNIGQL 467 >gi|169334003|ref|ZP_02861196.1| hypothetical protein ANASTE_00395 [Anaerofustis stercorihominis DSM 17244] gi|169258720|gb|EDS72686.1| hypothetical protein ANASTE_00395 [Anaerofustis stercorihominis DSM 17244] Length = 469 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 31/257 (12%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L+ P+ IS M+ G + + I +L+ + AM G ++ + A + + +Y Sbjct: 143 LNNPVYISHMSFG--ALSKEIKVSLSKGSAMAGSAMCSGEGGILKEEMEAANKY-IFEYV 199 Query: 115 PHTVLIS-----NLGAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNPL-QEIIQPN- 163 P+ ++ N A+++ G K H+ G + + PL ++II P+ Sbjct: 200 PNKYSVTDENLKNADAIEIKIGQGT-KPGMGGHLPGGKVTPEIAKVRNKPLGKDIISPSK 258 Query: 164 --GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 G DL + + L D + ++ G D+E + +G + I GRGG + Sbjct: 259 LEGINTKEDLKNLVDELRERSDGRPIGIKIAAGRIERDLEYIVYAGADFVTIDGRGGATG 318 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSI 277 + RD S +PT +L AR Y + + + + +GGLR D K+I Sbjct: 319 ASPRIIRDSTS----------VPTVYALYRARKYLDSVKSDMELVITGGLRVSSDFAKAI 368 Query: 278 ILGASLGGLASPFLKPA 294 +GA +AS L A Sbjct: 369 AMGADAVAIASAGLMAA 385 >gi|256157424|ref|ZP_05455342.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] gi|256253598|ref|ZP_05459134.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|261220734|ref|ZP_05935015.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|265995913|ref|ZP_06108470.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] gi|260919318|gb|EEX85971.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|262550210|gb|EEZ06371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] Length = 381 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|238488625|ref|XP_002375550.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220697938|gb|EED54278.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 800 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G DI K+I LGA G+ FL + V IE ++ E +M LL Sbjct: 702 EVFVDGGIRRGTDIFKAICLGAKAVGMGRQFLYSLTYGQEGVERLIEIMKDELETTMKLL 761 Query: 320 GTKRVQELY---LNTALIRH 336 G + + + LNT + H Sbjct: 762 GITDLSQAHPGLLNTLDVDH 781 >gi|327294639|ref|XP_003232015.1| glycolate oxidase [Trichophyton rubrum CBS 118892] gi|326465960|gb|EGD91413.1| glycolate oxidase [Trichophyton rubrum CBS 118892] Length = 492 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 28/160 (17%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PLLLK V S+ D L +++GI ++ GG R+L++ + Sbjct: 331 LPLLLKGV---QSADDAVLAMEAGIDGILLSNHGG---------RNLDTSPASII----- 373 Query: 244 PTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 + LE+ R C E + G+R G DILK+I LGA+ G+ FL + + Sbjct: 374 ---VLLELHR-RCPEVFDRMEIYIDSGIRRGTDILKAICLGATAVGMGRSFLFASNYGQE 429 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 I+ +R E +M +G + + Y+NTA I H Sbjct: 430 GAEHLIDIMRDELEGAMRNIGITSLDQAGPQYINTADIDH 469 >gi|306841520|ref|ZP_07474218.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO2] gi|306288357|gb|EFM59716.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO2] Length = 382 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 286 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 344 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 345 GVTLALEIIRKEMDITMALCGKRDINEI 372 >gi|254712680|ref|ZP_05174491.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] gi|254715750|ref|ZP_05177561.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261217510|ref|ZP_05931791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261320385|ref|ZP_05959582.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] gi|260922599|gb|EEX89167.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261293075|gb|EEX96571.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] Length = 381 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|306846130|ref|ZP_07478692.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO1] gi|306273381|gb|EFM55242.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO1] Length = 381 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|23500647|ref|NP_700087.1| L-lactate dehydrogenase [Brucella suis 1330] gi|62317254|ref|YP_223107.1| L-lactate dehydrogenase LldD [Brucella abortus bv. 1 str. 9-941] gi|83269235|ref|YP_418526.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|148558478|ref|YP_001257841.1| L-lactate dehydrogenase [Brucella ovis ATCC 25840] gi|161620972|ref|YP_001594858.1| L-lactate dehydrogenase (cytochrome) [Brucella canis ATCC 23365] gi|163845035|ref|YP_001622690.1| hypothetical protein BSUIS_B0912 [Brucella suis ATCC 23445] gi|189022515|ref|YP_001932256.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus S19] gi|254690761|ref|ZP_05154015.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254698540|ref|ZP_05160368.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254703239|ref|ZP_05165067.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|254705616|ref|ZP_05167444.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|254710846|ref|ZP_05172657.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|254720217|ref|ZP_05182028.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|254731987|ref|ZP_05190565.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256029229|ref|ZP_05442843.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256058916|ref|ZP_05449130.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|256255944|ref|ZP_05461480.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260167677|ref|ZP_05754488.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|260544492|ref|ZP_05820313.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus NCTC 8038] gi|260567827|ref|ZP_05838296.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 4 str. 40] gi|260756332|ref|ZP_05868680.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260759760|ref|ZP_05872108.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260762999|ref|ZP_05875331.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260882156|ref|ZP_05893770.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|261313026|ref|ZP_05952223.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261318419|ref|ZP_05957616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|261322853|ref|ZP_05962050.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|261753870|ref|ZP_05997579.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|261757113|ref|ZP_06000822.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|265985227|ref|ZP_06097962.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|265986217|ref|ZP_06098774.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|297249301|ref|ZP_06933002.1| L-lactate dehydrogenase (cytochrome) [Brucella abortus bv. 5 str. B3196] gi|306838641|ref|ZP_07471477.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. NF 2653] gi|23464291|gb|AAN34092.1| L-lactate dehydrogenase [Brucella suis 1330] gi|62197447|gb|AAX75746.1| LldD, L-lactate dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82939509|emb|CAJ12481.1| FMN-dependent alpha-hydroxy acid dehydrogenase:FMN/related compound-binding core [Brucella melitensis biovar Abortus 2308] gi|148369763|gb|ABQ62635.1| L-lactate dehydrogenase [Brucella ovis ATCC 25840] gi|161337783|gb|ABX64087.1| L-lactate dehydrogenase (cytochrome) [Brucella canis ATCC 23365] gi|163675758|gb|ABY39868.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021089|gb|ACD73810.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus S19] gi|260097763|gb|EEW81637.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus NCTC 8038] gi|260154492|gb|EEW89573.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 4 str. 40] gi|260670078|gb|EEX57018.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260673420|gb|EEX60241.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260676440|gb|EEX63261.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260871684|gb|EEX78753.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|261297642|gb|EEY01139.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|261298833|gb|EEY02330.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|261302052|gb|EEY05549.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261737097|gb|EEY25093.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|261743623|gb|EEY31549.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|264658414|gb|EEZ28675.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|264663819|gb|EEZ34080.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|297173170|gb|EFH32534.1| L-lactate dehydrogenase (cytochrome) [Brucella abortus bv. 5 str. B3196] gi|306406284|gb|EFM62527.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. NF 2653] Length = 381 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|296534826|ref|ZP_06897170.1| L-lactate dehydrogenase (cytochrome) [Roseomonas cervicalis ATCC 49957] gi|296264850|gb|EFH11131.1| L-lactate dehydrogenase (cytochrome) [Roseomonas cervicalis ATCC 49957] Length = 395 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P+ +S+ +A + + GG+R+G D++K++ LGA + +L A Sbjct: 283 GAPSSISVLPSIAEAVGERIEVMFDGGIRSGQDVMKAVALGAKGCMIGKSWLYGLAAGGQ 342 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRV 324 V A+E +RKE +SM L GTK + Sbjct: 343 AGVTTALEIMRKELDISMALTGTKTI 368 >gi|255101539|ref|ZP_05330516.1| dehydrogenase [Clostridium difficile QCD-63q42] Length = 340 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 ++A+ + + GG+R GVD++K + LGA + PF+ + D V IE + Sbjct: 253 DIAKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKI 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E +M L G + V+++ Sbjct: 313 RNELCETMILTGCQNVKDI 331 >gi|225629376|ref|ZP_03787409.1| FMN-dependent dehydrogenase [Brucella ceti str. Cudo] gi|237816814|ref|ZP_04595806.1| L-lactate dehydrogenase [cytochrome] [Brucella abortus str. 2308 A] gi|294853868|ref|ZP_06794540.1| L-lactate dehydrogenase [Brucella sp. NVSL 07-0026] gi|225615872|gb|EEH12921.1| FMN-dependent dehydrogenase [Brucella ceti str. Cudo] gi|237787627|gb|EEP61843.1| L-lactate dehydrogenase [cytochrome] [Brucella abortus str. 2308 A] gi|294819523|gb|EFG36523.1| L-lactate dehydrogenase [Brucella sp. NVSL 07-0026] Length = 382 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 286 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 344 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 345 GVTLALEIIRKEMDITMALCGKRDINEI 372 >gi|332662608|ref|YP_004445396.1| Lactate 2-monooxygenase [Haliscomenobacter hydrossis DSM 1100] gi|332331422|gb|AEE48523.1| Lactate 2-monooxygenase [Haliscomenobacter hydrossis DSM 1100] Length = 423 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+R G D+ K++ LGAS GL P++ + V + L +F ++M L G Sbjct: 350 ILDSGIRGGADVFKALALGASAVGLGRPYVYGLTLGGQQGVYEVLRHLMADFELTMRLAG 409 Query: 321 TKRVQEL 327 +RV+E+ Sbjct: 410 CRRVEEI 416 >gi|256015681|ref|YP_003105690.1| L-lactate dehydrogenase [Brucella microti CCM 4915] gi|255998341|gb|ACU50028.1| L-lactate dehydrogenase [Brucella microti CCM 4915] Length = 381 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|254695934|ref|ZP_05157762.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|261216362|ref|ZP_05930643.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|260917969|gb|EEX84830.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] Length = 381 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|321256970|ref|XP_003193424.1| hypothetical protein CGB_D2490W [Cryptococcus gattii WM276] gi|317459894|gb|ADV21637.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 514 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESL 308 M P + GG+R D+LK+I LGA+ G+ P + AM + + V A++ L Sbjct: 401 MNNPLRPRFEIFVDGGVRRATDVLKAIALGATAVGIGRPMIY-AMSTYGKEGVSHALQIL 459 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 + EF ++M LLG + ++ N Sbjct: 460 KDEFEMNMRLLGAPTMADVVPN 481 >gi|331005033|ref|ZP_08328438.1| L-lactate dehydrogenase [gamma proteobacterium IMCC1989] gi|330421161|gb|EGG95422.1| L-lactate dehydrogenase [gamma proteobacterium IMCC1989] Length = 327 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMF 317 Q + G+R+G D+LK++ +GA G + FL AM V AIE +RKE VSM Sbjct: 251 QVLFDSGIRSGQDLLKAMAMGAQGGLIGKAFLYGLGAM-GKQGVTTAIELIRKELDVSMA 309 Query: 318 LLGTKRVQELYLNT 331 L G + L NT Sbjct: 310 LTGNCDINHLRSNT 323 >gi|254700120|ref|ZP_05161948.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] gi|261750612|ref|ZP_05994321.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] gi|261740365|gb|EEY28291.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] Length = 381 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + GG+R+G D+LK+ LGA + PFL AM + Sbjct: 285 PSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GKE 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E +RKE ++M L G + + E+ Sbjct: 344 GVTLALEIIRKEMDITMALCGKRDINEI 371 >gi|167625211|ref|YP_001675505.1| ferredoxin-dependent glutamate synthase [Shewanella halifaxensis HAW-EB4] gi|167355233|gb|ABZ77846.1| ferredoxin-dependent glutamate synthase [Shewanella halifaxensis HAW-EB4] Length = 515 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 59/260 (22%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PL +S M+ G+ +E+ K+A+A G++ V + + Sbjct: 181 KLAIPLFVSDMSYGS-------------LSEEAKIALARGAELVGTGICSGEGGMLDEEQ 227 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + Y+ + Q+ H G G HL + + + P Sbjct: 228 AENSRYFYELASAEFGYNEALLSRVQSFHFKGGQGAKTGTGGHLPASKNVGKIAEVRGLP 287 Query: 163 NGN-----TNFADLSSKIALLSSAMDVPLLLKEVGCGLS----------SMDIELGLKSG 207 G F DL S A V +EV G+ DI+ L + Sbjct: 288 EGTDAISPPTFKDLKSSADFKRFADRV----REVSGGIPIGFKLSANHIERDIQFALDAS 343 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQF 261 Y + GRGG + + E RD S +PT +L AR Y +E Sbjct: 344 ADYIILDGRGGGTGAAPEIFRDHIS----------VPTIPALARARRYLDEQGMSGLVTL 393 Query: 262 IASGGLRNGVDILKSIILGA 281 I +GG+R +D +K++ LGA Sbjct: 394 IITGGIRTPIDFVKAMALGA 413 >gi|213514408|ref|NP_001135240.1| Hydroxyacid oxidase 1 [Salmo salar] gi|209155060|gb|ACI33762.1| Hydroxyacid oxidase 1 [Salmo salar] Length = 379 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P L + E+ + GG+R G D+LK++ LGA+ L P L A Sbjct: 277 GVPATLDVLSEVVSAVAGRCEVYLDGGVRRGTDVLKALALGATAVFLGRPVLWGLACQGE 336 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E +R E ++M L G V E +N +L+R Sbjct: 337 QGVSDVLELMRDELHLAMALAGCCSVAE--VNRSLVRR 372 >gi|154322399|ref|XP_001560514.1| hypothetical protein BC1G_00542 [Botryotinia fuckeliana B05.10] gi|150847876|gb|EDN23069.1| hypothetical protein BC1G_00542 [Botryotinia fuckeliana B05.10] Length = 496 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 22/168 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 S IA L +P+LLK V +S+D ++ L GI I+ GG R L++ Sbjct: 327 SDIAWLRRCTKLPILLKGVQ---TSLDAKMALDYGIDGILISNHGG---------RSLDT 374 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + L L+ P + + GG+ G DI K++ LGA G+ FL Sbjct: 375 SPASIL------VLLELQKNAPEVFDGMEVFIDGGIMRGTDIFKALCLGAKAVGIGRGFL 428 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + V I+ L+ E +M ++G + +++ LNT + H Sbjct: 429 FALGWGHEGVEKYIDILKDELETTMRMMGITDLSQVHPGMLNTRAVDH 476 >gi|284036731|ref|YP_003386661.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirosoma linguale DSM 74] gi|283816024|gb|ADB37862.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirosoma linguale DSM 74] Length = 349 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 29/155 (18%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P+LLK + L+S D EL +++G+ ++ GG R+L++ Sbjct: 212 LQSFAKIPILLKGI---LNSDDAELAIQAGVSGIIVSNHGG---------RNLDT----- 254 Query: 238 FQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LK 292 P ++E +A + GG+R G D++K+I LGA+ + P Sbjct: 255 -------VPATIEALPRIAERVNKRVPVLMDGGIRRGTDVVKAIALGANAVLVGKPICFG 307 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A +D V + LR E ++M L G + ++ Sbjct: 308 LACGGADGVAKVLTILRTELELAMALTGKATLTDI 342 >gi|223647272|gb|ACN10394.1| Hydroxyacid oxidase 1 [Salmo salar] gi|223673151|gb|ACN12757.1| Hydroxyacid oxidase 1 [Salmo salar] Length = 369 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P L + E+ + GG+R G D+LK++ LGA+ L P L A Sbjct: 267 GVPATLDVLSEVVSAVAGRCEVYLDGGVRRGTDVLKALALGATAVFLGRPVLWGLACQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E +R E ++M L G V E +N +L+R Sbjct: 327 QGVSDVLELMRDELHLAMALAGCCSVAE--VNRSLVRR 362 >gi|78485688|ref|YP_391613.1| ferredoxin-dependent glutamate synthase [Thiomicrospira crunogena XCL-2] gi|78363974|gb|ABB41939.1| glutamate synthase (NADPH) GltB2 subunit [Thiomicrospira crunogena XCL-2] Length = 441 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D VP+ +K +G + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAIKIQELREITDWNVPIYIK-IGATRTYYDVKLAVKAGADVIVLDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT +L A E Q I SGG+R+G D+ K Sbjct: 263 Q-----------DVFIEHVGIPTMAALPQAVRALQEMGMHRKVQLIVSGGIRSGADVAKC 311 Query: 277 IILGA 281 + LGA Sbjct: 312 MALGA 316 >gi|302423212|ref|XP_003009436.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261352582|gb|EEY15010.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 376 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Query: 245 TPLSLEMARP-YCNEAQF------IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 TP LE+A Y N Q +A G+R G D+LK + LG G+ PF+ + Sbjct: 268 TPGPLEIAYEIYRNAPQVFQQVDVLADSGIRYGSDVLKLLALGVKAVGMGRPFMYSNVYG 327 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNT 331 + V AI+ +R E + LG +Q + +LNT Sbjct: 328 LEGVTKAIDIMRTEIVRDGAQLGATNLQNISTSFLNT 364 >gi|126700002|ref|YP_001088899.1| dehydrogenase [Clostridium difficile 630] gi|115251439|emb|CAJ69272.1| Alpha-hydroxy acid dehydrogenase,FMN-dependent [Clostridium difficile] Length = 340 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 ++A+ + + GG+R GVD++K + LGA + PF+ + D V IE + Sbjct: 253 DIAKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKV 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E +M L G + V+++ Sbjct: 313 RNELCETMILTGCQNVKDI 331 >gi|255307413|ref|ZP_05351584.1| dehydrogenase [Clostridium difficile ATCC 43255] Length = 340 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 ++A+ + + GG+R GVD++K + LGA + PF+ + D V IE + Sbjct: 253 DIAKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKV 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E +M L G + V+++ Sbjct: 313 RNELCETMILTGCQNVKDI 331 >gi|241204437|ref|YP_002975533.1| L-lactate dehydrogenase (cytochrome) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858327|gb|ACS55994.1| L-lactate dehydrogenase (cytochrome) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 395 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIASRVGDSVAVMVDGGFRRGTDIMKALALGACFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG +V ++ Sbjct: 359 PGVLKAADILKTELHSNMALLGVTKVGDI 387 >gi|322832877|ref|YP_004212904.1| (S)-mandelate dehydrogenase [Rahnella sp. Y9602] gi|321168078|gb|ADW73777.1| (S)-mandelate dehydrogenase [Rahnella sp. Y9602] Length = 383 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 141/368 (38%), Gaps = 78/368 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-------GNNKMIER 74 N++ F W I L + S + D SV G++LS PLLI+ TG G + M+ R Sbjct: 40 NREVFGRWRFIPPVLNDSS--QRDLSVTVCGQRLSAPLLIAP-TGYNGMLRFGADTMLAR 96 Query: 75 INRNLAIAAEKTKVAMA----VGSQRV--------MFSDHNAIKSF-ELRQYAPHTVLIS 121 + IA ++ V+ A + +Q + + D S E + A T L+ Sbjct: 97 TAKRAGIAYIQSTVSTASLEEIAAQNLPQHWFQLYVLKDRTVTTSLLERARAAGCTTLVV 156 Query: 122 NLGAVQLNYDFGVQKAHQ---AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI--- 175 ++ AV ++ ++ + VL + LH + ++P G F +L + Sbjct: 157 SVDAVHFGNREKDKRNYRRPMKLSVLSMIDVALHPGWVWRTLKPAGMPGFGNLKPYVPAD 216 Query: 176 --------ALLSSAMDV----------------PLLLKEVGCGLSSMDIELGLKSGIRYF 211 + S+ MD LL+K + L+ D +L SG Sbjct: 217 KQRGAGGASYFSAQMDTRLNWETLRWIRSQWQGALLIKGI---LAPEDAQLAFASGADGI 273 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNG 270 ++ GG R L+ + + L R C ++A + G R G Sbjct: 274 VLSNHGG---------RQLDGSVSALE---------VLPEIRKLCGSQATILIDSGFRRG 315 Query: 271 VDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D++K++ LGA L P L A A+E + +E +M LG V++ L Sbjct: 316 TDVVKALALGADAVLLGRPMLYGVAAAGEAGAQRALEIILQEVDRTMAQLGCTSVRQ--L 373 Query: 330 NTALIRHQ 337 L+R Q Sbjct: 374 GPHLLRQQ 381 >gi|126304353|ref|XP_001382129.1| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Monodelphis domestica] Length = 374 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA L P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGIRKGTDVLKALALGAKAVFLGRPIIWGLAYQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E +++EF ++M L G + V+++ Sbjct: 327 KGVKQVLEMMKEEFQLAMALTGCRNVKDI 355 >gi|150376630|ref|YP_001313226.1| L-lactate dehydrogenase [Sinorhizobium medicae WSM419] gi|150031177|gb|ABR63293.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium medicae WSM419] Length = 378 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL + V A++ +RKE +M L G +R Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGALGKEGVRIALDIIRKEMDTTMALCGKRR 367 Query: 324 VQELYLN 330 + ++ L+ Sbjct: 368 ITDVGLD 374 >gi|312978315|ref|ZP_07790058.1| lactate 2-monooxygenase [Lactobacillus crispatus CTV-05] gi|310894834|gb|EFQ43905.1| lactate 2-monooxygenase [Lactobacillus crispatus CTV-05] Length = 426 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 272 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGCPYLYGLALGGA 331 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 332 HGVASVIEQLNDELKIDMQLTGCKTIDDV 360 >gi|302881067|ref|XP_003039455.1| hypothetical protein NECHADRAFT_56146 [Nectria haematococca mpVI 77-13-4] gi|256720300|gb|EEU33742.1| hypothetical protein NECHADRAFT_56146 [Nectria haematococca mpVI 77-13-4] Length = 489 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 22/166 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L P++LK V +++MD +L ++ + ++ GG R+L++ Sbjct: 323 IAWLRKHWSGPIVLKGV---ITAMDAKLAVEHKLEGIVLSNHGG---------RNLDTSP 370 Query: 235 GIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + L L+ + P ++ + + GG+R G DI K++ LGA G+ FL Sbjct: 371 ASIL------VLLELQKSCPEVFDKLEVLIDGGIRRGTDIFKALCLGAKGVGVGRGFLYA 424 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + + I+ L+ E +M L G + +++ +NT I H Sbjct: 425 LDYGQEGIEKYIQILKDELETTMRLCGITHLSQVHPGLVNTLAIDH 470 >gi|71896019|ref|NP_001025624.1| hydroxyacid oxidase 2 (long chain) [Xenopus (Silurana) tropicalis] gi|60552675|gb|AAH91092.1| MGC108441 protein [Xenopus (Silurana) tropicalis] Length = 356 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L+ D EL + G++ ++ GG R L+ ++ Sbjct: 213 ICWLRSVTSLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGG---------RQLDGEL 260 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + E+ + GG+R G D+LK+I LGA L P + Sbjct: 261 ATI--------DALAEIVEVVQGRIEVYLDGGIRTGSDVLKAIALGAKCVFLGRPIVWGL 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V ++ L EF +SM L G + V E+ N Sbjct: 313 TYKGEEGVKGILQILTDEFRLSMALSGCRNVSEVNRN 349 >gi|149640943|ref|XP_001514644.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 368 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 58/338 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-NRNLA 80 N F W L R L ++S +D S LG+++S P+ +++ ++R+ + + Sbjct: 40 NIDAFSRWKLYPRVLRDVS--ALDLSTSVLGQRVSMPICVAATA------LQRMAHADGE 91 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 IA + AM G +M S E+ Q AP + L + + + Q +A Sbjct: 92 IATVRACRAMGTG---MMLSSWATSSIEEVAQAAPDGIRWLQL-YIYKDRELTKQLVERA 147 Query: 141 VHVLGADGLFL------------------HLNPLQEI-------IQPNGNTNFADLSSKI 175 +G +FL HL P + + + + D S Sbjct: 148 -EKMGYKAIFLTMDTPYLGNRLDDTRNQFHLPPHLRMKNFETSDLAFSSKKGYGDKSGLA 206 Query: 176 ALLSSAMDVPLLLKEVGC--GLSSMDIELGLKSGIRYFDIAGRG---GTSWSRIESHRDL 230 ++ A+D + +++ GL+S+ I + GI D A G S + +H Sbjct: 207 GYVAQAIDPSINWQDIKWLKGLTSLPI---VAKGILRADDAREAVKYGVSGILVSNHGAR 263 Query: 231 ESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + D G+P + + E+ + + GG+R G D+LK+I LGA + Sbjct: 264 QLD--------GVPATIDVLSEVVEAVEGQVEVFLDGGVRKGTDVLKAIALGARAVFIGR 315 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 P + A + ++ L++EF ++M L G + V+ Sbjct: 316 PIIWGLAYQGEEGAKNVLKMLKEEFQLAMALTGCRNVK 353 >gi|291389051|ref|XP_002711026.1| PREDICTED: hydroxyacid oxidase 1 [Oryctolagus cuniculus] Length = 370 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E LR+EF ++M L G + VQ ++ L+R Sbjct: 327 QGVQDVLEILREEFRLAMALSGCQNVQ--VIDKTLVRK 362 >gi|218671010|ref|ZP_03520681.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli GR56] Length = 208 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG+R G DI+K++ LGA + PFL A + Sbjct: 112 GTASPLQVLPEIAARVGDSIAVMVDGGIRRGTDIMKALALGARFVFVGRPFLYAAAVAGL 171 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG +V ++ Sbjct: 172 PGVLRAADILKAELHSNMALLGVTKVADI 200 >gi|255946616|ref|XP_002564075.1| Pc22g00300 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591092|emb|CAP97318.1| Pc22g00300 [Penicillium chrysogenum Wisconsin 54-1255] Length = 394 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 84/356 (23%), Positives = 139/356 (39%), Gaps = 86/356 (24%) Query: 26 FDDWHLIHRALPEI--SFDEVDPSVEFLGKKLSFPLLISSM-------TGGNNKMIERIN 76 DDW LI+ P I S D +D LG FP +S+M G ++ Sbjct: 47 LDDWSLIN-FRPRILRSVDSMDTRRNILGHTSQFPFFVSAMGTLGSSHPGAEPLLVRGAT 105 Query: 77 R---NLAIAAEKTK-----VAMAVGSQRVMFSDHNAIKSFELRQYAPH------------ 116 R + I+ TK + + QR++ + + SF+L Y P Sbjct: 106 RKGLHTMISTASTKPLEEIMDAHLDEQRLLGNKSPSNLSFQL--YVPVDRTRAKSLIRRV 163 Query: 117 ----------TVLISNLGA--------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 TV S LG + N D GV + + +H + Q Sbjct: 164 KTAGYQSLWVTVDTSTLGKRTADRYLQARENLDAGVAENARDIH--SENDFAPAFGGRQV 221 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM-DIELGLKSGIRYFDIAGRG 217 +G + DL +SS P++LK G+ S+ D++L ++ G++ ++ G Sbjct: 222 PGSVDGGLTWEDLD----WISSEWGGPMVLK----GIQSVEDVKLAVQHGVQGILLSNHG 273 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEA----QFIASGGLRNGVD 272 G R + S P+ L +L R Y EA Q GGLR+G D Sbjct: 274 G---------RQIHS----------APSSLMTLLEIRTYYPEAFDKLQVFVDGGLRDGAD 314 Query: 273 ILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +LK++ LGA+ G+ P + A ++ V + + +E ++M +LG + +L Sbjct: 315 VLKALCLGATAVGVGRPYYYALAAYGAEGVERCTDIITEELEITMKMLGVSSLDQL 370 >gi|118083411|ref|XP_416535.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 378 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L+ D EL ++ G++ ++ GG R L+ Sbjct: 235 IYWLRSLTHLPIVIKGI---LTKEDAELAVRHGVQGIIVSNHGG---------RQLD--- 279 Query: 235 GIVFQDWGIPTPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G P + +E+ + + GG+R G D+LK++ LGA + P L Sbjct: 280 -------GAPATIDALVEVVEAVRDRVEVYLDGGIRKGSDVLKALALGAKCVFIGRPALW 332 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + + LR EF +SM L G + E+ Sbjct: 333 GLAYKGEEGLQDVLRILRDEFRLSMALAGCASISEI 368 >gi|254975973|ref|ZP_05272445.1| dehydrogenase [Clostridium difficile QCD-66c26] gi|255093361|ref|ZP_05322839.1| dehydrogenase [Clostridium difficile CIP 107932] gi|255315106|ref|ZP_05356689.1| dehydrogenase [Clostridium difficile QCD-76w55] gi|255517776|ref|ZP_05385452.1| dehydrogenase [Clostridium difficile QCD-97b34] gi|255650891|ref|ZP_05397793.1| dehydrogenase [Clostridium difficile QCD-37x79] gi|260683963|ref|YP_003215248.1| putative dehydrogenase [Clostridium difficile CD196] gi|260687623|ref|YP_003218757.1| putative dehydrogenase [Clostridium difficile R20291] gi|306520778|ref|ZP_07407125.1| putative dehydrogenase [Clostridium difficile QCD-32g58] gi|260210126|emb|CBA64270.1| probable dehydrogenase [Clostridium difficile CD196] gi|260213640|emb|CBE05467.1| probable dehydrogenase [Clostridium difficile R20291] Length = 340 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 ++A+ + + GG+R GVD++K + LGA + PF+ + D V IE + Sbjct: 253 DIAKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKV 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E +M L G + V+++ Sbjct: 313 RNELCETMILTGCQNVKDI 331 >gi|320587589|gb|EFX00064.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 497 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 20/155 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I + +P+++K G+ S+ D++L + G+ ++ GG + D+ + Sbjct: 331 IGFIRKNTKLPIIVK----GIQSVEDVQLCVDHGVEGVILSNHGGRQADYAPAPIDVLYE 386 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I ++ D ++ + GG+R G D++K++ LGA GL PFL Sbjct: 387 IRVLRPD--------------LFDKIDIMIDGGVRTGADVVKAVALGAKAVGLGRPFLYA 432 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V IE L +E + +M +G +++L Sbjct: 433 NGTHGQEGVRRVIEILHEEIVNTMRNIGAATIKDL 467 >gi|153008779|ref|YP_001369994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ochrobactrum anthropi ATCC 49188] gi|151560667|gb|ABS14165.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ochrobactrum anthropi ATCC 49188] Length = 381 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 246 PLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSD 299 P S+ M +P + + + GG+R+G D+LK+ LGA + PFL AM D Sbjct: 285 PSSISMLQPIVDAVGDKIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAM-GQD 343 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A++ +RKE ++M L G + + ++ Sbjct: 344 GVTLALDIIRKELDITMALCGKRDINDI 371 >gi|147770035|emb|CAN74334.1| hypothetical protein VITISV_021217 [Vitis vinifera] Length = 372 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A D V A++ LR EF ++M L G + Sbjct: 289 GGVRRGTDVFKALALGASGIFIGRPVVYSLAADGEAGVRKALQMLRDEFELTMALSGCRS 348 Query: 324 VQELYLN 330 ++E+ N Sbjct: 349 LKEIXRN 355 >gi|330720853|gb|EGG99048.1| Glutamate synthase [NADPH] large chain [gamma proteobacterium IMCC2047] Length = 440 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI + D VP+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAVKITEIREITDWKVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT + +A E Q I SGG+ NG D+ K Sbjct: 263 Q-----------DVFIEHVGIPTLACIPLAVKALQEMGMHRKVQLIVSGGITNGADVAKC 311 Query: 277 IILGA 281 + LGA Sbjct: 312 MALGA 316 >gi|145355646|ref|XP_001422069.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582308|gb|ABP00363.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 398 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 EA+ I GG+ GVD++K++ LGA+ G+ +L A V A E L E + Sbjct: 313 EEAEVIYDGGIMRGVDVVKALALGANAVGVGKAYLYGLAAGEGAGVNKAFEILTSETKRA 372 Query: 316 MFLLGTKRVQEL 327 M LLG K V EL Sbjct: 373 MGLLGVKDVHEL 384 >gi|300311906|ref|YP_003775998.1| L-lactate dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300074691|gb|ADJ64090.1| L-lactate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--AMDSSDAVVAAIESL 308 +A+ ++ + GG+R+G D+LK++ LGA + FL AM + V +E + Sbjct: 296 IAQAVGDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAM-GGEGVSQMLEIM 354 Query: 309 RKEFIVSMFLLGTKRVQEL 327 RKE VSM L GTK ++++ Sbjct: 355 RKELDVSMALTGTKDIKDV 373 >gi|160936237|ref|ZP_02083610.1| hypothetical protein CLOBOL_01133 [Clostridium bolteae ATCC BAA-613] gi|158441047|gb|EDP18771.1| hypothetical protein CLOBOL_01133 [Clostridium bolteae ATCC BAA-613] Length = 453 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 41/248 (16%) Query: 55 LSFPLLISSMTGG--NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 L P+ IS M+ G + + ++R A+A + AM G ++ + A + + + Sbjct: 127 LDHPVYISHMSFGALSRETKTALSRGSAMA----RTAMCSGEGGILPEEKAAAYKY-IFE 181 Query: 113 YAP--HTVLISNL---GAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNPL-QEIIQP 162 Y P ++V NL A+++ G K H+ G + + PL Q++I P Sbjct: 182 YVPNQYSVTDENLREADAIEIKIGQGT-KPGMGGHLPGGKVTPEIAAIRNKPLGQDVISP 240 Query: 163 ------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + L ++ L+S P+ +K + G D+E + +G + I GR Sbjct: 241 SRFPGIDTKEDLKALVDRLRLVSGGR--PIGIK-IAAGRIEKDLEFCVYAGPDFITIDGR 297 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVD 272 GG + + + RD S +PT +L AR Y ++A Q + +GGLR D Sbjct: 298 GGATGASPKIIRDSTS----------VPTIYALYRARKYLDQAGCGAQLVITGGLRVSSD 347 Query: 273 ILKSIILG 280 K++ +G Sbjct: 348 FAKALAMG 355 >gi|330686337|gb|EGG97942.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Staphylococcus epidermidis VCU121] Length = 449 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 13/142 (9%) Query: 7 IDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD------PSVEFLGK--KLSFP 58 +D+ IV K+PGI D+ + R L ++ E+ P + G K + Sbjct: 69 LDNDPIVIKNPGIPYTVSIIDE--AVKRGLKVLTEVELSYLISEAPIIAVTGTNGKTTVT 126 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 LI M N+++ R++ N+ A +KVA V S+ + ++ ++ + + QY PH Sbjct: 127 SLIGDMFK-NSRLTGRLSGNIGYVA--SKVAQEVSSKEYLITELSSFQLLGIEQYKPHIA 183 Query: 119 LISNLGAVQLNYDFGVQKAHQA 140 +I+N+ + L+Y ++ A Sbjct: 184 IITNIYSAHLDYHESLENYQNA 205 >gi|322708724|gb|EFZ00301.1| mitochondrial cytochrome b2, putative [Metarhizium anisopliae ARSEF 23] Length = 551 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + GG+R G D++K++ LGA GL + Sbjct: 427 DTAPPAVHTLLEIRKYCPEIFSKIEVWVDGGIRRGTDVVKALCLGAKAVGLGRAALFGLG 486 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E L E M LLG KR+ EL Sbjct: 487 AGGQAGVERTLEILEAETATCMRLLGVKRISEL 519 >gi|256849717|ref|ZP_05555148.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] gi|256713206|gb|EEU28196.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] Length = 426 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 272 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGRPYLYGLALGGA 331 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 332 HGVASVIEQLNAELKIDMQLTGCKTIDDV 360 >gi|227878953|ref|ZP_03996854.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus JV-V01] gi|227861436|gb|EEJ69054.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus JV-V01] Length = 433 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 279 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGRPYLYGLALGGA 338 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 339 HGVASVIEQLNAELKIDMQLTGCKTIDDV 367 >gi|8920285|emb|CAB96380.1| long chain 2-hydroxy acid oxidase [Mus musculus] Length = 353 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ ++ + DL LL S +P++LK + L+ D EL +K I ++ GG Sbjct: 201 PSSSSCWNDLP----LLQSMTRLPIILKGI---LTKEDAELAVKHNIXGIIVSNHGG--- 250 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSI 277 R L+ P S++ R + + GG+R G D+LK++ Sbjct: 251 ------RQLDE------------VPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKAL 292 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P + A D V ++ L++E M L G + V E+ Sbjct: 293 ALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI 343 >gi|302882916|ref|XP_003040363.1| hypothetical protein NECHADRAFT_34838 [Nectria haematococca mpVI 77-13-4] gi|256721241|gb|EEU34650.1| hypothetical protein NECHADRAFT_34838 [Nectria haematococca mpVI 77-13-4] Length = 457 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 9/102 (8%) Query: 244 PTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 P + LE+ R +C ++ + GG++ G D++K++ LGA GL L A+ Sbjct: 338 PIQVLLEI-RKFCPQILSQVEIWVDGGIKRGSDVVKALALGARGVGLGRAALYSLAVGGE 396 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 D V +++ L E I +M LLG V EL ++N+A + Q Sbjct: 397 DGVSRSLQILADETITTMRLLGASCVSELRPQHVNSAALNSQ 438 >gi|302881054|ref|XP_003039449.1| hypothetical protein NECHADRAFT_56158 [Nectria haematococca mpVI 77-13-4] gi|256720293|gb|EEU33736.1| hypothetical protein NECHADRAFT_56158 [Nectria haematococca mpVI 77-13-4] Length = 489 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 22/166 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L P++LK V +++MD +L ++ + ++ GG R+L++ Sbjct: 323 IAWLRKHWSGPIVLKGV---ITAMDAKLAVEHKLEGIVLSNHGG---------RNLDTSP 370 Query: 235 GIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + L L+ + P ++ + + GG+R G DI K++ LGA G+ FL Sbjct: 371 ASIL------VLLELQKSCPEVFDKLEVLIDGGIRRGTDIFKALCLGAKGVGVGRGFLYA 424 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + + I+ L+ E +M L G + +++ +NT I H Sbjct: 425 LDYGQEGIEKYIQILKDELETTMRLCGITHLSQVHPGLVNTLAIDH 470 >gi|260951123|ref|XP_002619858.1| hypothetical protein CLUG_01017 [Clavispora lusitaniae ATCC 42720] gi|238847430|gb|EEQ36894.1| hypothetical protein CLUG_01017 [Clavispora lusitaniae ATCC 42720] Length = 554 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+ +K V S DI L + GI ++ GG + ++ +D V ++ G+ Sbjct: 389 VPVAVKGVQ---SVEDIILAAEKGIPAVVLSNHGGRQLDFSRAPIEVLADAMPVLKEKGL 445 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 ++ + GG+R G D++K++ LGA GL FL + D V Sbjct: 446 D------------DKIEIYVDGGVRRGSDVIKALCLGAKGVGLGRIFLYANSAYGEDGVR 493 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E + M LLG + EL Sbjct: 494 KAIQLLKDEIRIDMRLLGVSTIDEL 518 >gi|256843513|ref|ZP_05549001.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] gi|256614933|gb|EEU20134.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] Length = 426 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 272 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGRPYLYGLALGGA 331 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 332 HGVASVIEQLNDELKIDMQLTGCKTIDDV 360 >gi|16264899|ref|NP_437691.1| hypothetical protein SM_b20858 [Sinorhizobium meliloti 1021] gi|15141038|emb|CAC49551.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti 1021] Length = 161 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL + + A++ +RKE +M L G +R Sbjct: 91 GGIRSGHDVLKAIALGAKGTYIGRPFLYGLGALGKEGMTLALDIIRKEMDTTMALCGKRR 150 Query: 324 VQEL 327 + E+ Sbjct: 151 ITEV 154 >gi|119871661|ref|YP_929668.1| ferredoxin-dependent glutamate synthase [Pyrobaculum islandicum DSM 4184] gi|119673069|gb|ABL87325.1| ferredoxin-dependent glutamate synthase [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%) Query: 236 IVFQDWGIPTPLSLEM---ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + +D G PT + L+ AR + + +G L NG ++K++ LGA+ +A PFL Sbjct: 331 VALKDLGYPTVVGLKYIKAAREAGVKTSLLIAGRLYNGGHVVKAVALGATAVYMARPFLI 390 Query: 293 PAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V IESL+ E +++ LG V++L Sbjct: 391 AALTKGEEGVSKYIESLKLEIQMAVSALGKYDVRDL 426 >gi|116251827|ref|YP_767665.1| L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115256475|emb|CAK07559.1| putative L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 395 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIASRVGDSVAVMVDGGFRRGTDIMKALALGARFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG +V ++ Sbjct: 359 PGVLKAADILKTELHSNMALLGVTKVGDI 387 >gi|295693250|ref|YP_003601860.1| L-lactate oxidase [Lactobacillus crispatus ST1] gi|295031356|emb|CBL50835.1| L-lactate oxidase [Lactobacillus crispatus ST1] Length = 426 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 272 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGRPYLYGLALGGA 331 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 332 HGVASVIEQLNDELKIDMQLTGCKTIDDV 360 >gi|311254481|ref|XP_003125868.1| PREDICTED: hydroxyacid oxidase 2-like [Sus scrofa] Length = 353 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K + ++ GG + + D S++ Sbjct: 210 LSWFQSLTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALSEV 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA + P L Sbjct: 267 VAAVK-----------------GKIEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGL 309 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + L+ EF SM L G + V E+ Sbjct: 310 ACKGEHGVEEVLNILKNEFHTSMTLTGCRSVAEI 343 >gi|332705014|ref|ZP_08425099.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] gi|332356191|gb|EGJ35646.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] Length = 107 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 E+ N + GG+R G D+LK++ LGAS + P L A+ V ++ L Sbjct: 20 EVVAAVGNYLPVLIDGGIRRGTDVLKALALGASAVLVGHPVLWGLAVAGVAGVRHVLQLL 79 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 R E ++M L G +V+++ L+ I+H Sbjct: 80 RDELHIAMVLSGCTKVKDIDLSFVKIKH 107 >gi|310792523|gb|EFQ28050.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 525 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 29/180 (16%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + N++D++ L + +P++LK V + MD E +G+ ++ GG Sbjct: 348 DASVNWSDIA---WLRRTVPGLPIVLKGV---QTWMDAERAAGAGVEAIVLSNHGG---- 397 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYC-NEAQFIASGGLRNGVDILKSIIL 279 R L++ V + LE+ R P+ + + GG+ G DI K++ L Sbjct: 398 -----RSLDTSPATVM--------VLLELQRNCPHVFDRVEVYVDGGVSRGTDIFKALCL 444 Query: 280 GASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 GA GL L ++ V IE LR E +M + G + ++ +LNT + H Sbjct: 445 GAKAVGLGRGLLYSLNYGAEGVERYIEILRDELETTMKMCGVTSLDQVHPGFLNTLAVDH 504 >gi|302405511|ref|XP_003000592.1| hydroxyacid oxidase [Verticillium albo-atrum VaMs.102] gi|261360549|gb|EEY22977.1| hydroxyacid oxidase [Verticillium albo-atrum VaMs.102] Length = 382 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + + A GG+R G DILK + LGA G+ P++ + ++ V E LR+E IV Sbjct: 299 KTEVWADGGVRYGGDILKLLALGAKAVGVGRPYMFANIYGTEGVEKVTELLRRELIVDAG 358 Query: 318 LLG---TKRVQELYLN 330 LG K + Y+N Sbjct: 359 NLGLPSLKDIDSTYVN 374 >gi|302919469|ref|XP_003052870.1| hypothetical protein NECHADRAFT_35867 [Nectria haematococca mpVI 77-13-4] gi|256733810|gb|EEU47157.1| hypothetical protein NECHADRAFT_35867 [Nectria haematococca mpVI 77-13-4] Length = 383 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 27/180 (15%) Query: 164 GNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 GN A LS K IA L A ++LK V +++MD +L + + ++ GG Sbjct: 205 GNWVDASLSWKDIAWLRKAWSGRIVLKGV---MTAMDAKLAAEHKLDGIVLSNHGG---- 257 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYC-NEAQFIASGGLRNGVDILKSIIL 279 R+L++ + L LE+ + P+ ++ + + GG+R G D+ K++ L Sbjct: 258 -----RNLDTSPATIL--------LLLELQKNCPHVFDQLEILVDGGIRRGTDVFKALCL 304 Query: 280 GASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 GA G+ F + V +E L+ E +M L G + +++ +NT + H Sbjct: 305 GAKAVGVGRGFSYALNYGEEGVKKYVEILKDELETTMRLCGITDLSQVHPGLVNTGAVDH 364 >gi|262046708|ref|ZP_06019669.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] gi|260573157|gb|EEX29716.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] Length = 405 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P + + E+A+ + I G+R G I K++ LGA + G+ P+L A+ + Sbjct: 251 GAPATIDVLPEIAQAVNHRVPIIFDSGVRRGSHIFKALALGADIVGIGRPYLYGLALGGA 310 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + IE L E + M L G K + ++ Sbjct: 311 HGVASVIEQLNAELKIDMQLTGCKTIDDV 339 >gi|195382687|ref|XP_002050061.1| GJ21929 [Drosophila virilis] gi|194144858|gb|EDW61254.1| GJ21929 [Drosophila virilis] Length = 366 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 29/149 (19%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++K V L++ D EL + G ++ GG R L+S Sbjct: 227 LPIVVKGV---LTAEDAELAREFGCAGIIVSNHGG---------RQLDS----------- 263 Query: 244 PTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 TP ++E + + + + GG+R G DILK++ LGA + L P + A D Sbjct: 264 -TPATIEVLPEIVKAVGKDLVVMLDGGIREGNDILKALALGAQMVFLGRPSIWALACDGQ 322 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E LR++F +SM L G + + ++ Sbjct: 323 RGVEQLLELLREDFKISMALTGCRTLADI 351 >gi|225443896|ref|XP_002278104.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297740741|emb|CBI30923.3| unnamed protein product [Vitis vinifera] Length = 372 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A D V A++ LR EF ++M L G + Sbjct: 289 GGVRRGTDVFKALALGASGIFIGRPVVYSLAADGEAGVRKALQMLRDEFELTMALSGCRS 348 Query: 324 VQELYLN 330 ++E+ N Sbjct: 349 LKEISRN 355 >gi|300716812|ref|YP_003741615.1| L-lactate dehydrogenase (cytochrome) [Erwinia billingiae Eb661] gi|299062648|emb|CAX59768.1| L-lactate dehydrogenase (Cytochrome) [Erwinia billingiae Eb661] Length = 413 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 228 RDLESDIGIVFQ------DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 RDL +D I+ D+ P SLE + I G+R G D++K++ LGA Sbjct: 298 RDLGADAVILSNHGGRQLDYTFPPLYSLEEIAAKKGAMKVIIDSGIRRGTDVMKAMALGA 357 Query: 282 SLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 L PFL A+ A V A+ LR E + L+G + EL Sbjct: 358 DFVFLGRPFLYGAVIGGQACVEHAMHILRDEIDRDLALIGVRTPGEL 404 >gi|269968812|ref|ZP_06182798.1| putative glutamate synthetase [Vibrio alginolyticus 40B] gi|269826562|gb|EEZ80910.1| putative glutamate synthetase [Vibrio alginolyticus 40B] Length = 466 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 132 RLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 178 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + Q YD QA H G G HL + + + P Sbjct: 179 AANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 238 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L +G Y Sbjct: 239 EGQPAISPPTFKDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDAGADYI 298 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 299 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 348 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR D +K++ LGA +A+ AM S V A I Sbjct: 349 GLRVPTDFVKALALGADGVAIAN----SAMQSIGCVAARI 384 >gi|189195198|ref|XP_001933937.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979816|gb|EDU46442.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 508 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R YC E + GG++ G D++K++ LGA G+ + + V +E Sbjct: 400 RKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARGVGVGRAALFGLGAGGKEGVARVLEI 459 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALI 334 L+ E M LLG +RV +L Y+NT + Sbjct: 460 LKAETETCMRLLGVERVDQLGMQYINTRAV 489 >gi|222086703|ref|YP_002545237.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] gi|221724151|gb|ACM27307.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] Length = 379 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+L+++ LGA + PFL AM D V A+E +RKE +SM G + Sbjct: 308 GGIRSGQDVLRAVALGAKGTYIGRPFLYGLGAM-GKDGVTLALEIIRKEMDLSMAFCGKR 366 Query: 323 RVQEL 327 ++ + Sbjct: 367 DIKTV 371 >gi|86358732|ref|YP_470624.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86282834|gb|ABC91897.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 380 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVTLALSIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALIRHQ 337 + + +N ++I Q Sbjct: 367 DIND--VNASIISRQ 379 >gi|328860321|gb|EGG09427.1| hypothetical protein MELLADRAFT_47483 [Melampsora larici-populina 98AG31] Length = 493 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 N+ + GG+R D+LK++ LGA G+ PFL + VV AI+ L+ E + Sbjct: 382 NKFEIYVDGGIRRSSDVLKALCLGAKAVGIGRPFLYAYSTYGVPGVVRAIQILKDELEMD 441 Query: 316 MFLLGTKRVQEL 327 M L+G + +L Sbjct: 442 MRLIGAPTLDDL 453 >gi|327184249|gb|AEA32696.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1118] Length = 409 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 70/342 (20%), Positives = 131/342 (38%), Gaps = 71/342 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL ++ + D EF+G KL P++IS + +++ + Sbjct: 54 NTSAFNHYQIVPRALTDMDDPQTD--TEFMGMKLKTPIMISPIACHG-----IAHKDAEV 106 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A +K A A G+ + S A KS E + AP L + ++DF + A Sbjct: 107 ATQKG--AAAAGA--LFSSSTYANKSVEDIAAAAPEAPRFFQL-YLSKDWDFN-KMVFDA 160 Query: 141 VHVLGADGLFLHLNPL--------------------------------QEIIQPNGNTNF 168 + G G+FL ++ L Q + Q ++ Sbjct: 161 IKKAGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVAQMYASSAQ 220 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +A + +P+ +K V C + D + +G + GG R Sbjct: 221 KIGPEDVARIKKESGLPVFVKGVMC---AEDAYKAIGAGADGIYVTNHGG---------R 268 Query: 229 DLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 +++ G P + + E+A+ + + G+R G + K++ LGA + G+ Sbjct: 269 EVD----------GAPATIDVLPEIAKAVNHRVPIVFDSGVRRGSHVFKALALGADIVGI 318 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P+L A+ V + I L E + M L G K + ++ Sbjct: 319 GRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDV 360 >gi|226310686|ref|YP_002770580.1| oxidoreductase [Brevibacillus brevis NBRC 100599] gi|226093634|dbj|BAH42076.1| putative oxidoreductase [Brevibacillus brevis NBRC 100599] Length = 381 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 27/173 (15%) Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 L+ I P N N IA L +P+L+K + L D L L+ G+ ++ Sbjct: 227 LKNIYHPALNWN------DIAFLREHTHLPILVKGI---LHPDDARLALEHGVDGIIVSN 277 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG R ++ I + +P +A + + G+R G D++K Sbjct: 278 HGG---------RQMDGAISTLD---ALPA-----IAEVIAGKIPLLLDSGVRTGADVVK 320 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +I LGA+ + PFL A+ V + +++L EF V+M L G+ + +L Sbjct: 321 AIALGANAILIGRPFLYGLAVAGEQGVTSVLDTLIHEFDVAMALSGSNSIADL 373 >gi|313898737|ref|ZP_07832272.1| dehydrogenase, FMN-dependent [Clostridium sp. HGF2] gi|312956621|gb|EFR38254.1| dehydrogenase, FMN-dependent [Clostridium sp. HGF2] Length = 341 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 68/304 (22%), Positives = 112/304 (36%), Gaps = 57/304 (18%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--GSQRVMFS 100 E+D + EF G K+SFP+ + ++G I +N + A+ G +R Sbjct: 67 EIDTTSEFFGHKVSFPVYAAPISG--------ILQNYGAELDDMSYTRALVDGCRRAGTL 118 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV------QKAHQAVHV-LGADGLFLH- 152 + P +V+ + G FGV + H A + L +G L Sbjct: 119 AFTGDGMHDEMFKGPMSVVAQHEG-------FGVPTIKPWSREHMAWRIELAKEGHALAI 171 Query: 153 --------LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 L L+ I P G N +L + DVP +LK + LS L Sbjct: 172 ASDIDASGLTNLRTSITPVGFKNVEELKEITRICG---DVPFILKGI---LSVKGARKAL 225 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++G ++ GG S ++ DI V + Sbjct: 226 EAGASGIIVSNHGGRVLDDCLSGIEVLEDIVKVVD-----------------GRMKVFVD 268 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G R G D+ K++ LGA + P + + D SD +V +E +R E +M + G K Sbjct: 269 GAFRTGNDVFKALALGADGVLIGRPVSQAVIGDGSDGLVTYLEKIRLELKEAMAMAGCKT 328 Query: 324 VQEL 327 +Q++ Sbjct: 329 IQDI 332 >gi|219115591|ref|XP_002178591.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] gi|217410326|gb|EEC50256.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] Length = 431 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + I GG++ G DI K++ LGA G+ P+L A + V+ A + L+ E +M Sbjct: 328 DVEIIMDGGVQRGTDICKALALGADAVGVGKPYLWGLAAGGTAGVIKAYDILKVELDRAM 387 Query: 317 FLLGTKRVQEL 327 LLGT V L Sbjct: 388 GLLGTPTVAAL 398 >gi|170766903|ref|ZP_02901356.1| L-lactate dehydrogenase [Escherichia albertii TW07627] gi|170124341|gb|EDS93272.1| L-lactate dehydrogenase [Escherichia albertii TW07627] Length = 396 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + SL KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLSLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKSIKEI 370 >gi|78042702|ref|YP_359141.1| FMN-dependent family dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77994817|gb|ABB13716.1| dehydrogenase, FMN-dependent family [Carboxydothermus hydrogenoformans Z-2901] Length = 340 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 21/145 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P +LK + ++ + EL +++G + ++ GG D+ + Sbjct: 207 LPFILKGI---MTPDEAELAVRAGAKAIVVSNHGGRVLDETPGAADV------------L 251 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 P E+A + +A GG+R+GVD+LK + LGA + P + A ++ V Sbjct: 252 P-----EIAARVKGKITILADGGVRSGVDVLKLLALGADGVLIGRPIIVAAFGGGAEGVK 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E ++KE +M L G RV E+ Sbjct: 307 IYLEKIKKELREAMLLTGVARVTEV 331 >gi|18310860|ref|NP_562794.1| glycolate oxidase [Clostridium perfringens str. 13] gi|18145542|dbj|BAB81584.1| probable glycolate oxidase [Clostridium perfringens str. 13] Length = 340 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L ++ +P +LK + ++ + EL +++G+ ++ GG + + ++ Sbjct: 195 EEIKELVNSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEV-- 249 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +P E+A + + + GG+R GVDILK I LGA + PF+ Sbjct: 250 ----------LP-----EIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFIT 294 Query: 293 PAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V + SL+ E +M L G ++ + Sbjct: 295 ATFAHGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|327194716|gb|EGE61561.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 380 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVTLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALIRHQ 337 + + +NT++I Q Sbjct: 367 DIND--VNTSIILPQ 379 >gi|218886302|ref|YP_002435623.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757256|gb|ACL08155.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 339 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 L L+++ +P G A+LS +I A + +LK + ++++D L ++ G Sbjct: 178 LVTLRKMGRPVGPKTPAELS-RIVDKVKARGMAFILKGI---MTTIDASLAVEVGADGIV 233 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG R+ H +++ +P E+A +A GG+R+GVD Sbjct: 234 VSNHGG----RVLDHAPGTAEV--------LP-----EIADAVKGRIAILADGGVRDGVD 276 Query: 273 ILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + K + LGA L PF A+ D V ++S++ + + +M L G+ V + Sbjct: 277 VFKMLALGADAVMLGRPFSIAAVGGLKDGVTMLVDSIKGQLVQAMVLTGSANVASI 332 >gi|110800372|ref|YP_696560.1| FMN-dependent dehydrogenase [Clostridium perfringens ATCC 13124] gi|168211674|ref|ZP_02637299.1| FMN-dependent dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|110675019|gb|ABG84006.1| FMN-dependent dehydrogenase [Clostridium perfringens ATCC 13124] gi|170710360|gb|EDT22542.1| FMN-dependent dehydrogenase [Clostridium perfringens B str. ATCC 3626] Length = 340 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L ++ +P +LK + ++ + EL +++G+ ++ GG + + ++ Sbjct: 195 EEIKELVNSTKLPFILKGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEV-- 249 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +P E+A + + + GG+R GVDILK I LGA + PF+ Sbjct: 250 ----------LP-----EIAARVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFIT 294 Query: 293 PAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V + SL+ E +M L G ++ + Sbjct: 295 ATFAHGAKGVEEYVNSLKGELKSAMVLTGCNSIENI 330 >gi|310795146|gb|EFQ30607.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 384 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 20/123 (16%) Query: 224 IESHRD------LESDIGIVFQDWG--------IPTPLSLEMARPYCNEA----QFIASG 265 I++H D S GI+ + G P + LE+ R YC + + G Sbjct: 231 IQTHEDAYAATLFPSVKGIIISNHGGRALDTTLTPVQVLLEI-RKYCPQVLGRIDVLIDG 289 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K++ LGA G+ L A+ V A++ L E + SM L+G +RV Sbjct: 290 GVRRGTDVVKALALGAKGVGIGRAALYGLAVGGQAGVERALQILADEIVTSMRLIGVERV 349 Query: 325 QEL 327 +L Sbjct: 350 DQL 352 >gi|225707262|gb|ACO09477.1| Hydroxyacid oxidase 1 [Osmerus mordax] Length = 369 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P L + E+ + GG+R G D+LK++ LGA+ L P L A Sbjct: 267 GVPATLEVLEEVVAAVAGRCEVYLDGGVRRGTDVLKALALGATAVFLGRPILWGLACQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E R E ++M L G + V E+ Sbjct: 327 QGVTDVLELFRDELHLAMALAGCRSVGEV 355 >gi|239636340|ref|ZP_04677342.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Staphylococcus warneri L37603] gi|239597695|gb|EEQ80190.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Staphylococcus warneri L37603] Length = 449 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 13/142 (9%) Query: 7 IDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD------PSVEFLGK--KLSFP 58 +D+ I+ K+PGI D+ + R L ++ E+ P + G K + Sbjct: 69 LDNNPIIIKNPGIPYTVSIIDE--AVKRGLKVLTEVELSYLISEAPIIAVTGTNGKTTVT 126 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 LI M N+++ R++ N+ A +KVA V S+ + ++ ++ + + QY PH Sbjct: 127 SLIGDMFK-NSRLTGRLSGNIGYVA--SKVAQEVSSKEYLITELSSFQLLGIEQYKPHIA 183 Query: 119 LISNLGAVQLNYDFGVQKAHQA 140 +I+N+ + L+Y ++ A Sbjct: 184 IITNIYSAHLDYHESLENYQNA 205 >gi|329948276|ref|ZP_08295120.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 170 str. F0386] gi|328522800|gb|EGF49908.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 170 str. F0386] Length = 422 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 P P L E+ R +A + G+ NG D++ ++ LGA G + +L M + Sbjct: 309 PVPFRLLPEVVREVGKDATIMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREG 368 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L E I +M LLG ++EL Sbjct: 369 VDRMIEILSDEVIRTMKLLGVSSLEEL 395 >gi|303321964|ref|XP_003070976.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110673|gb|EER28831.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040504|gb|EFW22437.1| FMN-dependent dehydrogenase [Coccidioides posadasii str. Silveira] Length = 492 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 249 LEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVA 303 LEM R YC E + GG++ G D++K++ LGA G+ P L + V Sbjct: 378 LEM-RKYCPEVFDKLEVWVDGGIKRGTDVVKALCLGAKAVGIGRPALFGLGAGGIEGVER 436 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 ++ L +E +M LLG +RV +L Sbjct: 437 VLQILNEETQTAMRLLGVERVDDL 460 >gi|37927400|gb|AAP69813.1| putative glycolate oxidase [Vitis vinifera] Length = 156 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A D V A++ LR EF ++M L G + Sbjct: 73 GGVRRGTDVFKALALGASGIFIGRPVVYSLAADGEAGVRKALQMLRDEFELTMALSGCRS 132 Query: 324 VQELYLN 330 ++E+ N Sbjct: 133 LKEISRN 139 >gi|320533460|ref|ZP_08034137.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134318|gb|EFW26589.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 171 str. F0337] Length = 422 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 P P L E+ R +A + G+ NG D++ +I LGA G + +L M + Sbjct: 309 PVPFRLLPEVVREVGKDATIMVDTGIMNGADVVAAIALGAKFGLVGRAYLYGLMAGGREG 368 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L E + +M LLG ++EL Sbjct: 369 VDRMIEILSDEVVRTMKLLGVSSLEEL 395 >gi|291391810|ref|XP_002712261.1| PREDICTED: phosphodiesterase 11A [Oryctolagus cuniculus] Length = 1015 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ RG W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSRGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|302884469|ref|XP_003041130.1| hypothetical protein NECHADRAFT_97036 [Nectria haematococca mpVI 77-13-4] gi|256722027|gb|EEU35417.1| hypothetical protein NECHADRAFT_97036 [Nectria haematococca mpVI 77-13-4] Length = 383 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 17/150 (11%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L + D+P+++K + +S D +L +K + ++ GG S ++ DI Sbjct: 237 LQTMTDLPIIVKGI---MSVRDAKLAVKHKVPAIVLSNHGGRQLDGAPSALEVALDI--- 290 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 + A + + A GG+R G +LK + LG G+ PF+ + Sbjct: 291 -----------YKKAPEVFEKTEVFADGGVRYGTHVLKLLALGVKAVGVGRPFMYSNIFG 339 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V IE L++E V LG ++E+ Sbjct: 340 QEGVERTIELLKREIAVDGANLGLGSLKEI 369 >gi|210622544|ref|ZP_03293237.1| hypothetical protein CLOHIR_01185 [Clostridium hiranonis DSM 13275] gi|210154179|gb|EEA85185.1| hypothetical protein CLOHIR_01185 [Clostridium hiranonis DSM 13275] Length = 338 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 E+A+ + + + GG+R GVD++K I LGA + PF+ + ++D V + + Sbjct: 253 EIAKAVKGKIKILVDGGVRTGVDVVKMIGLGADAVLIGRPFVTASFGGATDGVETYVNKI 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + E +M L G + E+ Sbjct: 313 KSEIKGAMILTGCSNISEI 331 >gi|258569831|ref|XP_002543719.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237903989|gb|EEP78390.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 480 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R +C E + GG+R G D++K++ LGA G+ + +D V ++ Sbjct: 369 RKFCPEVFDSLEVWVDGGIRRGTDVVKALCLGAKAVGIGRAALFGLGAGGTDGVKRVLQI 428 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L++E +M LLG ++V++L Sbjct: 429 LKQETKTAMRLLGVEKVEDL 448 >gi|148695255|gb|EDL27202.1| mCG127686, isoform CRA_a [Mus musculus] Length = 902 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 706 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 757 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 758 ELVRKGDYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 795 >gi|124486646|ref|NP_001074502.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Mus musculus] gi|110815911|sp|P0C1Q2|PDE11_MOUSE RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; AltName: Full=cAMP and cGMP phosphodiesterase 11A gi|123232367|emb|CAM17618.1| phosphodiesterase 11A [Mus musculus] gi|123233742|emb|CAM23980.1| phosphodiesterase 11A [Mus musculus] gi|123858317|emb|CAM16587.1| phosphodiesterase 11A [Mus musculus] Length = 933 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 789 ELVRKGDYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 826 >gi|187957022|gb|AAI58126.1| Phosphodiesterase 11A [Mus musculus] Length = 933 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G WS I SHRD+ D+G V + W I Sbjct: 789 ELVRKGDYDWS-ITSHRDVFRSMLMTACDLGAVTKPWEI 826 >gi|126730557|ref|ZP_01746367.1| dehydrogenase, FMN-dependent family protein [Sagittula stellata E-37] gi|126708723|gb|EBA07779.1| dehydrogenase, FMN-dependent family protein [Sagittula stellata E-37] Length = 393 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKR 323 GGLR G D+LK++ LGA L PFL A + +A VA AI+ L +E + LLG Sbjct: 308 GGLRRGTDVLKALALGADFVFLGRPFLYAAALAGEAGVAHAIDLLSQEIDRDLALLGCPD 367 Query: 324 VQEL 327 + L Sbjct: 368 IATL 371 >gi|302407798|ref|XP_003001734.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261359455|gb|EEY21883.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 288 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%) Query: 244 PTPLSLEMA-RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 PTP+ + + R +C + + GG++ G D++K++ LGA GL L A+ Sbjct: 167 PTPIQVLLEIRKFCPQVLSKIDVLVDGGIKRGTDVVKALALGAKGVGLGRAALYGLALGG 226 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + V ++ L E + ++ LLG ++Q+L ++NTA + Sbjct: 227 QEGVERTLKILADETLTALRLLGVSKIQDLGPHHVNTAALNQ 268 >gi|261189059|ref|XP_002620942.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239591946|gb|EEQ74527.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239609220|gb|EEQ86207.1| cytochrome b2 [Ajellomyces dermatitidis ER-3] gi|327355881|gb|EGE84738.1| cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 513 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRK 310 R + + + GG+R DILK++ LGA G+ PFL AM + V A++ L+ Sbjct: 392 RGWQDRIEVYIDGGVRRATDILKALCLGAKGVGIGRPFLY-AMGAYGVPGVERAMQLLKD 450 Query: 311 EFIVSMFLLGTKRVQEL 327 E +++M L+G + +L Sbjct: 451 EMVMNMRLIGCSSIDQL 467 >gi|154287082|ref|XP_001544336.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407977|gb|EDN03518.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 337 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R +C E + GG+R G D++K++ LGA G+ +P + V +E Sbjct: 226 RKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGAQCVGVGRAPLFGLGAGGVEGVERVLEI 285 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L E +M LLG ++V +L ++N + Q Sbjct: 286 LSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 318 >gi|157376684|ref|YP_001475284.1| ferredoxin-dependent glutamate synthase [Shewanella sediminis HAW-EB3] gi|157319058|gb|ABV38156.1| ferredoxin-dependent glutamate synthase [Shewanella sediminis HAW-EB3] Length = 516 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 94/256 (36%), Gaps = 51/256 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL PL +S M+ G + E LAI AE + G ++ + A + Sbjct: 181 KLKIPLFVSDMSFG--ALSEEAKTALAIGAELAGTGICSGEGGMLPEEQAANSRY----- 233 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQ---EIIQ----P 162 L + Q Y + + QA H G G HL ++ +I Q P Sbjct: 234 ------FYELASAQFGYREELLHSIQAFHFKGGQGAKTGTGGHLPGIKNHGKISQVRGIP 287 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F +L S A V + V G DI+ L + Y Sbjct: 288 EGEPAISPPTFRELKSSCDFKRFADRVREVSGGVPVGFKLSANHIERDIQFALDATADYI 347 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + E RD S +PT +L AR Y +E I +G Sbjct: 348 ILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARRYLDEQGATGRVTLIVTG 397 Query: 266 GLRNGVDILKSIILGA 281 GLR +D +K++ LGA Sbjct: 398 GLRVPMDFVKAMALGA 413 >gi|153853845|ref|ZP_01995201.1| hypothetical protein DORLON_01192 [Dorea longicatena DSM 13814] gi|149753595|gb|EDM63526.1| hypothetical protein DORLON_01192 [Dorea longicatena DSM 13814] Length = 308 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 72/321 (22%), Positives = 124/321 (38%), Gaps = 41/321 (12%) Query: 26 FDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERINRNL 79 +D W I + I+ ++ VD S+E GKK +P + G+ N L Sbjct: 17 YDKWKEIRVQMDTIAENKPVDTSLELFGKKFKYPFFAGPVGAVGLHYGDCLDDVAYNDIL 76 Query: 80 AIAAEKTKVAMAVGS---QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 + K +A G VM + AIK + TV NL + + + Sbjct: 77 VSSCAKYGIAAFTGDGVDSNVMVAATKAIKKTD--GIGIPTVKPWNLDVIAGKMEMVHES 134 Query: 137 AHQAVHV-LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 AV + + A GL P + ++P + + +IA ++ P ++K V Sbjct: 135 KALAVAMDIDAAGL-----PFLKNMEPPAGSKTVEELRQIAKMAG---TPFIVKGV---- 182 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 M ++ LK A G S + +H G V + E+A Sbjct: 183 --MTVKGALK--------AKEAGASAIVVSNHG------GRVLDQCPATAEVLEEIALAV 226 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIV 314 + + GG+R+GVD+ K++ LGA +A PF+ + + V + IE L E Sbjct: 227 GDSMKIFVDGGIRSGVDVFKALALGADAVIIARPFVTAVYGGAEEGVKSYIEKLGTELED 286 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M + G ++E+ + R Sbjct: 287 TMKMCGVTSLEEIDRDCVWTR 307 >gi|92113203|ref|YP_573131.1| (S)-2-hydroxy-acid oxidase [Chromohalobacter salexigens DSM 3043] gi|91796293|gb|ABE58432.1| (S)-2-hydroxy-acid oxidase [Chromohalobacter salexigens DSM 3043] Length = 399 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 75/365 (20%), Positives = 139/365 (38%), Gaps = 76/365 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ F+ + + L ++S + D + LG ++S P++I TG N + + + LA Sbjct: 49 NRAVFNRYRFTPKTLTDVS--QRDLGRDLLGHRVSMPVVIGP-TGFNGMITQDGDSKLAR 105 Query: 82 AAEKTKVAMAVGS-------------------QRVMFSDHNAIKSF--ELRQYAPHTVLI 120 AA + + + Q + DH+ +K+ R T+++ Sbjct: 106 AAADRGIPFTLSNASTEPLEEIAKVPGGWPWMQIYFYRDHDYVKNLVDRCRASGYDTIVV 165 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFADLS------ 172 + A+ N ++ + + + + L + P +++++ P+G F +L Sbjct: 166 TTDSAIYGNREWDTRNYARPFVLNWRNKLHVLSRPRWMKDVLYPHGVPTFKNLGDLLPPE 225 Query: 173 ---------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I L LL+K + LS + + ++ GI Sbjct: 226 DSSVQGAAAEIGKHLMPSLNWEDIRWLRDNWSGNLLIKGI---LSVEEARMAVEYGIDGI 282 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG R L+S + P + E+ + + GG R G Sbjct: 283 VLSNHGG---------RQLDSSVS--------PMEILPEVRAAVGDALTILLDGGFRRGS 325 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK+++LGA L L A V A+ L KE ++ LLG +QE L+ Sbjct: 326 DILKAVLLGADAVLLGRTTLYGLGAGGQAGVEHALGLLHKEMDRTLGLLGCSNLQE--LD 383 Query: 331 TALIR 335 +LIR Sbjct: 384 RSLIR 388 >gi|218658859|ref|ZP_03514789.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli IE4771] Length = 178 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+I LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 98 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGAM-GKEGVTLALGIIRKEMDITMALCGKR 156 Query: 323 RVQELYLNTALIRHQ 337 + + +N ++I Q Sbjct: 157 DIND--VNASIISRQ 169 >gi|111017824|ref|YP_700796.1| FMN-dependent dehydrogenase [Rhodococcus jostii RHA1] gi|110817354|gb|ABG92638.1| FMN-dependent dehydrogenase [Rhodococcus jostii RHA1] Length = 432 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + I GG+R G D +K++ LGA+ + P+L A + V + +E +M L Sbjct: 328 EIIVDGGIRRGSDAIKALALGANACAIGRPYLYGLAAAGQEGVAHVLRIFAEEMTRTMML 387 Query: 319 LGTKRVQELYLN-TALIRHQ 337 LG ++EL N +L+R++ Sbjct: 388 LGVSSIKELQDNGPSLVRNR 407 >gi|13475754|ref|NP_107321.1| L-lactate dehydrogenase [Mesorhizobium loti MAFF303099] gi|14026510|dbj|BAB53107.1| L-lactate dehydrogenase [Mesorhizobium loti MAFF303099] Length = 378 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A + + GG+R+G D+LK++ LGA + PFL + V A+E + Sbjct: 293 EIADTVGDRIEVHMDGGIRSGQDVLKALCLGAKGTYIGRPFLYGLGALGKEGVTKALEII 352 Query: 309 RKEFIVSMFLLGTKRVQEL 327 RKE +++ L G + V ++ Sbjct: 353 RKEMDITLALCGKRLVTDM 371 >gi|115768303|ref|XP_790170.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115971320|ref|XP_001188645.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 400 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 24/176 (13%) Query: 165 NTNFADLSS--KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 NT D S I + S +P+++K + L++ D + G+ ++ GG Sbjct: 240 NTQIDDTVSWDDIGWIRSISSLPIVIKGI---LTAADAREAVSRGVAGVVVSNHGGRQLD 296 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D+ ++ + GI + GG+R+G DILK++ LGA Sbjct: 297 GVPASIDVLDEVASAIRGSGI----------------EVFFDGGVRSGTDILKALALGAR 340 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P L D S V +E L EF V+M L G+ V ++ + L+R Q Sbjct: 341 AVFIGRPALWALNYDGSAGVCKMLEILMIEFSVAMALTGSLSVADIKKD--LLRRQ 394 >gi|260462662|ref|ZP_05810868.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] gi|259031568|gb|EEW32838.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] Length = 378 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A + + GG+R+G D+LK++ LGA + PFL + V A+E + Sbjct: 293 EIADAVGDRIEVHMDGGIRSGQDVLKALCLGAKGTYIGRPFLYGLGALGKEGVTKALEII 352 Query: 309 RKEFIVSMFLLGTKRVQEL 327 RKE +++ L G + V ++ Sbjct: 353 RKEMDITLALCGKRLVTDM 371 >gi|241767916|ref|ZP_04765473.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] gi|241360942|gb|EER57724.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] Length = 231 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA-IESLR 309 +A+ + + + GG+R+GVDI K++ LGA + P++ +A ++A + +L+ Sbjct: 146 IAQAVGTQTEVLVDGGVRSGVDIFKALALGARGVLIGRPWVWALAGGGEAGLSALLATLQ 205 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E +++M L G R ++ Sbjct: 206 RELLLAMTLAGVTRTADI 223 >gi|238855319|ref|ZP_04645635.1| hydroxyacid oxidase [Lactobacillus jensenii 269-3] gi|260665198|ref|ZP_05866047.1| L-lactate oxidase [Lactobacillus jensenii SJ-7A-US] gi|282931572|ref|ZP_06337067.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] gi|238832061|gb|EEQ24382.1| hydroxyacid oxidase [Lactobacillus jensenii 269-3] gi|260560935|gb|EEX26910.1| L-lactate oxidase [Lactobacillus jensenii SJ-7A-US] gi|281304305|gb|EFA96412.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] Length = 408 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A I G+R G + K++ LGA L G+ PFL A+ + V + I + Sbjct: 282 EIAAAVNGRVPIILDSGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAKGVESVINQI 341 Query: 309 RKEFIVSMFLLGTKRVQEL 327 EF + M L G K V+++ Sbjct: 342 NNEFKILMQLTGCKTVEDV 360 >gi|312210386|emb|CBX90473.1| similar to mitochondrial cytochrome b2 [Leptosphaeria maculans] Length = 521 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R YC E + GG++ G D++K++ LGA G+ + + V +E Sbjct: 413 RKYCPEVFDRIEVWVDGGVKRGTDVVKALCLGARGVGVGRAALFGLGAGGKEGVARVLEI 472 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 L+ E M LLG ++V++L Y+NT + Sbjct: 473 LKAETETCMRLLGVEKVEQLGMQYINTRAVER 504 >gi|332799736|ref|YP_004461235.1| (S)-2-hydroxy-acid oxidase [Tepidanaerobacter sp. Re1] gi|332697471|gb|AEE91928.1| (S)-2-hydroxy-acid oxidase [Tepidanaerobacter sp. Re1] Length = 337 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 29/176 (16%) Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLKSGIRYFDIAGRGGT 219 QP G N ++ I SA+D+P +LK G+ ++D +L L++G ++ GG Sbjct: 188 QPVGPKNLQEIKEII----SAVDLPFILK----GIMTVDEAKLALEAGAAAIVVSNHGG- 238 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 R L+S G+ I L + +A GG+R+GVD+LK + L Sbjct: 239 --------RILDSTPGVAQVLPAIAAKLK--------GKITILADGGVRSGVDVLKYLAL 282 Query: 280 GASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 GA + P + + V +E++ E +M L G K ++ +N+++I Sbjct: 283 GADAVLVGRPVIIGAFGGGGEGVRLVLETMANELKQAMILTGCKDIKS--INSSVI 336 >gi|226287846|gb|EEH43359.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 499 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 28/160 (17%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L D Sbjct: 334 LPLVLKGV---MSADDAMLAMKAGLNGILLSNHGG---------RNL---------DTSP 372 Query: 244 PTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 P L+L C E + GG+R G DILK++ LGA+ G+ L + Sbjct: 373 PALLTLLELHKRCPEIFDKMEIYLDGGIRRGSDILKAVCLGATAVGMGRSVLYATNYGQE 432 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 V + ++ E +M L+G + E +NTA I H Sbjct: 433 GVEHLFDIMKDELEGAMRLVGITSLDEARPELVNTADIDH 472 >gi|254000122|ref|YP_003052185.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. SIP3-4] gi|313202085|ref|YP_004040743.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. MP688] gi|253986801|gb|ACT51658.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. SIP3-4] gi|312441401|gb|ADQ85507.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. MP688] Length = 444 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KIA L D P+ +K VG D+ L +K+G + G +GGT+ + Sbjct: 208 TGPDDLEIKIAELREITDWEKPIYVK-VGATRPYFDVTLAVKAGADVVVLDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIPT L RP + Q I SGG+RNG D+ Sbjct: 267 Q-----------EVFIEHVGIPT---LAAIRPAVQALQDMGMHRKVQLIVSGGIRNGADV 312 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 313 AKALALGA 320 >gi|323445312|gb|EGB01986.1| hypothetical protein AURANDRAFT_35605 [Aureococcus anophagefferens] Length = 336 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 15/115 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A S +P++LK V CG D L K+G+ ++ GG + S + +I Sbjct: 237 VAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGRNMDTARSSIEALPEI 293 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + + G+ + L + + GG+R G D++K++ LGA+ G+ P Sbjct: 294 ISMLTEAGLRSKLEVWL------------DGGIRRGSDVVKALALGANACGIGKP 336 >gi|302919450|ref|XP_003052866.1| hypothetical protein NECHADRAFT_35680 [Nectria haematococca mpVI 77-13-4] gi|256733806|gb|EEU47153.1| hypothetical protein NECHADRAFT_35680 [Nectria haematococca mpVI 77-13-4] Length = 485 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 30/61 (49%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + + GG R G D++K+I LGAS G+ FL V AI LR E +M L Sbjct: 385 EVLIDGGFRRGADVVKAICLGASAVGIGRSFLYSLSYGQQGVEHAISILRDEIETTMRLC 444 Query: 320 G 320 G Sbjct: 445 G 445 >gi|74004904|ref|XP_545544.2| PREDICTED: similar to phosphodiesterase 11A [Canis familiaris] Length = 1009 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 730 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 781 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I+SHRD+ D+G V + W I Sbjct: 782 ELVSKGEYDWN-IKSHRDIFRSMLMTACDLGAVTKPWEI 819 >gi|325957604|ref|YP_004293016.1| L-lactate oxidase [Lactobacillus acidophilus 30SC] gi|325334169|gb|ADZ08077.1| L-lactate oxidase [Lactobacillus acidophilus 30SC] Length = 409 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 70/342 (20%), Positives = 131/342 (38%), Gaps = 71/342 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL ++ + D EF+G KL P++IS + +++ + Sbjct: 54 NTSAFNHYQIVPRALTDMDDPQTD--TEFMGMKLKTPIMISPIACHG-----IAHKDAEV 106 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A +K A A G+ + S A KS E + AP L + ++DF + A Sbjct: 107 ATQKG--AAAAGA--LFSSSTYANKSVEDIAAAAPEAPRFFQL-YLSKDWDFN-KMVFDA 160 Query: 141 VHVLGADGLFLHLNPL--------------------------------QEIIQPNGNTNF 168 + G G+FL ++ L Q + Q ++ Sbjct: 161 IKKAGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVAQMYASSAQ 220 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +A + +P+ +K V C + D + +G + GG R Sbjct: 221 KIGPEDVARIKKESGLPVFVKGVMC---AEDAYKAIGAGADGIYVTNHGG---------R 268 Query: 229 DLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 +++ G P + + E+A+ + + G+R G + K++ LGA + G+ Sbjct: 269 EVD----------GAPATIDVLPEIAKAVNHRVPIVFDSGVRRGSHVFKALSLGADIVGI 318 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P+L A+ V + I L E + M L G K + ++ Sbjct: 319 GRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDV 360 >gi|297668938|ref|XP_002812676.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like, partial [Pongo abelii] Length = 593 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 397 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 448 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 449 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 486 >gi|258404295|ref|YP_003197037.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfohalobium retbaense DSM 5692] gi|257796522|gb|ACV67459.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfohalobium retbaense DSM 5692] Length = 336 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVS 315 + +A GG+R G D+LK + LGA + P A+ D V AA++ +R E + Sbjct: 258 GQTAILADGGVRTGGDVLKMLALGAEAVMVGRPISIAAVGGLEDGVRAALQQMRTELKQA 317 Query: 316 MFLLGTKR 323 M L GT R Sbjct: 318 MVLTGTAR 325 >gi|224055168|ref|XP_002197020.1| PREDICTED: phosphodiesterase 11A [Taeniopygia guttata] Length = 902 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 704 HFNHAVMILQSEGHNIFANLSSK-----DYSDLMQLLKQ---SILATDLTLYFERRTEFF 755 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +GG W+ I++HR++ D+G V + W I Sbjct: 756 ELVSKGGYDWN-IKNHREVFRSMLMTACDLGAVTKPWEI 793 >gi|218282712|ref|ZP_03488919.1| hypothetical protein EUBIFOR_01505 [Eubacterium biforme DSM 3989] gi|218216413|gb|EEC89951.1| hypothetical protein EUBIFOR_01505 [Eubacterium biforme DSM 3989] Length = 340 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFL 318 + GGLRNGVDI K++ LGA +A PF+ + + + ++ L E + +M + Sbjct: 266 KIFVDGGLRNGVDIFKALALGADAVIVARPFVNAIYGAKEEGIQVLVDKLGSELVDTMEM 325 Query: 319 LGTKRVQEL 327 G K ++++ Sbjct: 326 CGAKSLKDI 334 >gi|67541783|ref|XP_664659.1| hypothetical protein AN7055.2 [Aspergillus nidulans FGSC A4] gi|40742511|gb|EAA61701.1| hypothetical protein AN7055.2 [Aspergillus nidulans FGSC A4] gi|259483629|tpe|CBF79176.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 387 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 36/168 (21%) Query: 176 ALLSSAMDVPLLLKEVGCGLSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 A L + +P++LK G+ + D++L +K G+ ++ GG R L+S Sbjct: 239 AKLQNMTTLPIVLK----GIQHVEDVKLAIKHGVPAIILSNHGG---------RQLDS-- 283 Query: 235 GIVFQDWGIPTPLSLEMARPYC-------NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 +P SLE+A N+ + A GG+R G D+LK + LG GL Sbjct: 284 ----------SPSSLEVALEVYQEDPDLFNQIEIYADGGIRYGADVLKLLSLGVKAVGLG 333 Query: 288 SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT---KRVQELYLNTA 332 F+ ++ V AI+ L+ E + LG K++ Y+ A Sbjct: 334 RSFMYANAYGAEGVRHAIQLLKHEIAIDAANLGVPDLKKIDASYVKWA 381 >gi|330929525|ref|XP_003302676.1| hypothetical protein PTT_14585 [Pyrenophora teres f. teres 0-1] gi|311321818|gb|EFQ89232.1| hypothetical protein PTT_14585 [Pyrenophora teres f. teres 0-1] Length = 509 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 327 IPWFRSITKMPIILKGVQC---VEDVIRAVEVGVDGVVLSNHGGRQLDFARSGVEVLAEV 383 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 V + AR + + + GG+R DI+K++ LGA G+ PFL A Sbjct: 384 MPVLR------------ARGWQDRIEVYIDGGVRRATDIIKAVALGAKGVGIGRPFLY-A 430 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + V A++ L+ E ++M L+G + +L Sbjct: 431 MSAYGLPGVDRAMQLLKDEMEMNMRLIGASSIADL 465 >gi|118385795|ref|XP_001026023.1| glutamate synthase, putative [Tetrahymena thermophila] gi|89307790|gb|EAS05778.1| glutamate synthase, putative [Tetrahymena thermophila SB210] Length = 2661 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 6/80 (7%) Query: 203 GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +K+G IAG GGT ++I S + G+ + +WG+ + A N+ Q Sbjct: 382 AVKAGADRITIAGHSGGTGAAKISSI----FNTGMPW-EWGVALTHQMLDAYDLRNKIQL 436 Query: 262 IASGGLRNGVDILKSIILGA 281 +ASGG+ NG D++++I+LGA Sbjct: 437 VASGGIVNGCDVVEAILLGA 456 >gi|327192094|gb|EGE59072.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 395 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 G +PL + E+A + + GG+R G DI+K++ LGA + PFL A + Sbjct: 299 GTASPLQVLPEIAARVGDSIAVMVDGGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGL 358 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ A + L+ E +M LLG V ++ Sbjct: 359 PGVLRAADILKTELYSNMALLGVTSVGDI 387 >gi|319782238|ref|YP_004141714.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168126|gb|ADV11664.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 381 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL + V A+E +RKE +++ L G + Sbjct: 308 GGIRSGQDVLKALCLGAKGTYIGRPFLYGLGALGKEGVTKALEIIRKEMDITLALCGKRL 367 Query: 324 VQEL 327 V ++ Sbjct: 368 VTDM 371 >gi|222106753|ref|YP_002547544.1| L-lactate dehydrogenase [Agrobacterium vitis S4] gi|221737932|gb|ACM38828.1| L-lactate dehydrogenase [Agrobacterium vitis S4] Length = 386 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL D V A+E + +E +SM L G + Sbjct: 308 GGIRSGQDVLKALALGAKGTYIGRPFLYGLGADGRAGVQRALEIIARELDISMALCGKRL 367 Query: 324 VQEL 327 + E+ Sbjct: 368 ISEV 371 >gi|116536089|ref|NP_001070826.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2 [Homo sapiens] Length = 575 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 379 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 430 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 431 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 468 >gi|119196201|ref|XP_001248704.1| hypothetical protein CIMG_02475 [Coccidioides immitis RS] Length = 492 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 249 LEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVA 303 LEM R YC E + GG++ G D++K++ LGA G+ P L + V Sbjct: 378 LEM-RKYCPEVFDKLEVWVDGGIKRGTDVVKALCLGAKAVGIGRPALFGLGAGGIEGVER 436 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 ++ L +E +M LLG ++V++L Sbjct: 437 VLQILNEETQTAMRLLGVEKVEDL 460 >gi|11141611|gb|AAG32023.1|AF281865_1 cAMP/cGMP phosphodiesterase 11A2 [Homo sapiens] Length = 576 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 379 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 430 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 431 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 468 >gi|223999479|ref|XP_002289412.1| glycolate oxidase [Thalassiosira pseudonana CCMP1335] gi|220974620|gb|EED92949.1| glycolate oxidase [Thalassiosira pseudonana CCMP1335] Length = 398 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA+ G+ P F ++ DAV+ ++ ++E +M + G K V Sbjct: 313 GIRRGTDVLKALALGATAVGIGKPLFFALSVGGEDAVLNLLQMFQRETEAAMAICGCKSV 372 Query: 325 QEL 327 ++ Sbjct: 373 SDV 375 >gi|221197820|ref|ZP_03570866.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2M] gi|221204622|ref|ZP_03577639.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2] gi|221213098|ref|ZP_03586074.1| FMN-dependent dehydrogenase [Burkholderia multivorans CGD1] gi|221167311|gb|EED99781.1| FMN-dependent dehydrogenase [Burkholderia multivorans CGD1] gi|221175479|gb|EEE07909.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2] gi|221181752|gb|EEE14153.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2M] Length = 405 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKR 323 GG R G D+LK+I LGA + + PF + +A VA AI L++E M +LG + Sbjct: 333 GGFRRGADVLKAIALGARMVFVGRPFNYAMAVAGEAGVAHAIRLLQEEVDRDMAMLGART 392 Query: 324 VQELY 328 +EL+ Sbjct: 393 CRELH 397 >gi|238490005|ref|XP_002376240.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] gi|220698628|gb|EED54968.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] Length = 494 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L R YC E + GG+R G D++K++ LGA G+ P L Sbjct: 374 DTAPPAVHTLMEIRKYCPEVFDRLEVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLG 433 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL----------YLNTALIRHQ 337 D V ++ L E M LLG + V +L Y N + + HQ Sbjct: 434 AGGVDGVKRTLQILADESKTCMRLLGVETVDKLGPQHVRPLRYYPNDSEVPHQ 486 >gi|171184932|ref|YP_001793851.1| ferredoxin-dependent glutamate synthase [Thermoproteus neutrophilus V24Sta] gi|170934144|gb|ACB39405.1| ferredoxin-dependent glutamate synthase [Thermoproteus neutrophilus V24Sta] Length = 461 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 4/96 (4%) Query: 236 IVFQDWGIPTPLSLEM---ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + +D G PT + L+ AR + + +G L NG + K++ LGA+ ++ PFL Sbjct: 331 VALKDLGYPTVVGLKYIKAAREAGVKTSLLIAGRLYNGGHVAKAVALGATAVYMSRPFLI 390 Query: 293 PAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V+ IESL+ E +++ LG V++L Sbjct: 391 AALTKGEEGVLRYIESLKVELQMAVSALGKYDVKDL 426 >gi|225555486|gb|EEH03778.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus G186AR] Length = 495 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 9/103 (8%) Query: 244 PTPLSLEMA-RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS 297 PT + M R +C E + GG+R G D++K++ LGA G+ +P Sbjct: 374 PTAVHTMMEIRKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGARCVGVGRAPLFGLGAGG 433 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG ++V +L ++N + Q Sbjct: 434 VEGVERVLEILSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 476 >gi|240273771|gb|EER37290.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus H143] gi|325094795|gb|EGC48105.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus H88] Length = 495 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 9/103 (8%) Query: 244 PTPLSLEMA-RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS 297 PT + M R +C E + GG+R G D++K++ LGA G+ +P Sbjct: 374 PTAVHTMMEIRKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGARCVGVGRAPLFGLGAGG 433 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG ++V +L ++N + Q Sbjct: 434 VEGVERVLEILSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 476 >gi|159491040|ref|XP_001703481.1| glycolate oxidase [Chlamydomonas reinhardtii] gi|158280405|gb|EDP06163.1| glycolate oxidase [Chlamydomonas reinhardtii] Length = 382 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 18/154 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L +P+++K + LS D EL ++ G+ ++ GG S + + Sbjct: 221 IPWLRGVTKLPIIVKGL---LSPADAELAVQYGVDGIVVSNHGGRQLDYAPSGLHMLPAV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + G P+ + GG+R G D++K++ LGAS L P L Sbjct: 278 VAAVRGCGSSIPV--------------LVDGGVRRGTDVIKALALGASGVLLGRPVLYGL 323 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ V ++ LR E +SM L G VQ++ Sbjct: 324 AVGGQAGVERVLQLLRSEIELSMALAGCSSVQQI 357 >gi|156538859|ref|XP_001608027.1| PREDICTED: similar to CG18003-PA [Nasonia vitripennis] Length = 365 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + + P L A + V A +E++R+E + L G Sbjct: 286 GGIRQGTDVFKALALGARMVFIGRPMLWGLACGGEEGVRAVLETMRREVSETFALTGCSN 345 Query: 324 VQEL 327 VQ++ Sbjct: 346 VQQV 349 >gi|119475775|ref|ZP_01616128.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119451978|gb|EAW33211.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 383 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + I GG+R G DI+K+I LGA + P+L A V AI L+ E S+ L Sbjct: 307 ELICDGGIRRGTDIIKAIGLGADACSIGRPYLYGLAAGGQPGVARAIHLLKTEVERSLGL 366 Query: 319 LGTKRVQEL 327 +G + E+ Sbjct: 367 MGCCSIDEV 375 >gi|91225469|ref|ZP_01260591.1| putative glutamate synthetase [Vibrio alginolyticus 12G01] gi|91189832|gb|EAS76105.1| putative glutamate synthetase [Vibrio alginolyticus 12G01] Length = 513 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 179 RLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 225 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + Q YD QA H G G HL + + + P Sbjct: 226 AVNSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 285 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L +G Y Sbjct: 286 EGQPAISPPTFKDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDAGADYI 345 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 346 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGVSDRVTLIITG 395 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR D +K++ LGA +A+ AM S V A I Sbjct: 396 GLRVPTDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|15806052|ref|NP_294755.1| (S)-2-hydroxy-acid oxidase [Deinococcus radiodurans R1] gi|6458759|gb|AAF10604.1|AE001954_8 (S)-2-hydroxy-acid oxidase [Deinococcus radiodurans R1] Length = 353 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 22/154 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L +P++LK + L++ D+ L ++ G W+ R L D Sbjct: 214 IGWLRGITGLPIVLKGL---LTAEDVALAVQHGCHI----------WASNHGGRQL--DT 258 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + D +P E+A A+ GG+ G D+LK++ LGA+ LA L Sbjct: 259 AVTALD-ALP-----EIAEAANGRAEIYLDGGVTRGTDVLKALALGANAVFLARAVLYGL 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ D +E LR E ++M L G +V EL Sbjct: 313 ALAGEDGARHTLELLRDEVRLAMMLCGKTQVSEL 346 >gi|325958330|ref|YP_004289796.1| glutamate synthase (NADPH) [Methanobacterium sp. AL-21] gi|325329762|gb|ADZ08824.1| Glutamate synthase (NADPH) [Methanobacterium sp. AL-21] Length = 503 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 30/255 (11%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 + P++I++M+ G +I+ LA+ A A G + M + S + QYA Sbjct: 162 IDTPIMIAAMSFGALSKEAKIS--LAMGATLAGTATNTG-EGGMLPEERRYASKLIAQYA 218 Query: 115 PHTVLIS-----NLGAVQLNYDFGVQKAHQAVHVLG----ADGLFLHLNPL-QEIIQPNG 164 +S N AV++ G K+ H+LG AD + + P + + P Sbjct: 219 SGRFGVSAKYLNNSEAVEIKIGQGA-KSGMGGHLLGEKVTADVSRIRMIPEGTDALSPAR 277 Query: 165 NTNFA---DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGG 218 + + DLS KI+ L D VP+++K G S D+++ K+G + G +GG Sbjct: 278 HMDIVGPEDLSMKISQLREITDWKVPIIVKFTS-GRVSDDVKIAAKAGADIIVVDGMQGG 336 Query: 219 TSWSR--IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 T + H + + IV D + ++L ++ +A GG+RNG D+ K+ Sbjct: 337 TGAGPDVVTEHSGVPTIAAIVEADEALKQ-INLR------SKVNLVAGGGIRNGADVAKA 389 Query: 277 IILGASLGGLASPFL 291 I LGA +A+ L Sbjct: 390 IALGADAVYIATAAL 404 >gi|317033969|ref|XP_001395710.2| oxidoreductase [Aspergillus niger CBS 513.88] Length = 460 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 28/163 (17%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + S D L +K G+ + ++ GG R Sbjct: 312 DWMSAVTWLRKITDLPIAIKGIQ---SWEDAALCMKYGVHPW-LSNHGG---------RQ 358 Query: 230 LESDIGIVFQDWGIPTPLSLEMA-RPYCNE----AQFIASGGLRNGVDILKSIILGASLG 284 LE G P+ + +A +C E I GG+ G DI+K++ LGA Sbjct: 359 LE----------GAPSAVDTLLAIHTHCPEVFRRCDVIVDGGISRGSDIVKALALGAKGV 408 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL FL V AI L+ E +M LLG + L Sbjct: 409 GLGRAFLYALALGELGVDKAIRILKNEVETTMALLGVSSIDSL 451 >gi|254055120|gb|ACT64173.1| phosphodiesterase 11a [Cavia porcellus] Length = 157 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 16/104 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 48 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 99 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLS 248 ++ +G W+ I++HRD+ D+G V + W I ++ Sbjct: 100 ELVSKGEYDWN-IKNHRDVFRSMLMTACDLGAVTKPWEISRQVA 142 >gi|154278643|ref|XP_001540135.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413720|gb|EDN09103.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 511 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L++ + Sbjct: 334 LPLVLKGV---MSADDAMLAMKAGLDGILLSNHGG---------RNLDTSPPALV----- 376 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 T L L P ++ + GG+R G DILK++ LGA+ G+ L A + V Sbjct: 377 -TLLELHKRCPEIFDKIEIYVDGGIRRGTDILKAVCLGATAVGMGRSVLFAAAYGQEGVE 435 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + + E +M L+G + + + +NTA I H Sbjct: 436 HLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|116536087|ref|NP_001070665.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3 [Homo sapiens] Length = 683 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 487 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 538 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 539 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 576 >gi|10716054|dbj|BAB16372.1| phosphodiesterase 11A3 [Homo sapiens] gi|11136969|emb|CAC15567.1| cAMP/cGMP cyclic nucleotide phosphodiesterase 11A3 [Homo sapiens] gi|63253296|dbj|BAB62713.2| phosphodiesterase 11A3 [Homo sapiens] Length = 684 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 487 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 538 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 539 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 576 >gi|325088797|gb|EGC42107.1| cytochrome b2 [Ajellomyces capsulatus H88] Length = 475 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 74/327 (22%), Positives = 126/327 (38%), Gaps = 48/327 (14%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK FFD L R L + E + + LG ++ PL +S M++ I+ + Sbjct: 148 DANKSFFDRTWLRPRVLRNVK--EANTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 +A VA A S+ +M N+ S+ ++ + + +N D +A Sbjct: 201 ELA-----VARACESRGIMHGISNS-ASYPMKDITAAGPRANYFFQLYVNKD----RAKS 250 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS---SKIALLSSAMDVPLLLKEVGCGLS 196 A + N + F D + + +PL+LK V +S Sbjct: 251 AAQLRECSENPSAQNDSKGGGLGRVMGGFIDPALTWEDLVWARKHTHLPLVLKGV---MS 307 Query: 197 SMDIELGLKSGIRYFDIAGRGG----TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 + D L +K+G+ ++ GG TS + + +L +F GI Sbjct: 308 ADDAILAMKAGLDGILLSNHGGRNLDTSPPALVTLLELHKRCPEIFDKMGI--------- 358 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 GG+R G DILK++ LGA+ G+ L A + V + + E Sbjct: 359 ---------YVDGGIRRGTDILKAVCLGATAVGMGRSVLFAAAYGQEGVEHLFDIMADEL 409 Query: 313 IVSMFLLGTKRVQELY---LNTALIRH 336 +M L+G + + + +NTA I H Sbjct: 410 EGAMRLVGITSLDQAHPGLVNTADIDH 436 >gi|291523130|emb|CBK81423.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Coprococcus catus GD/7] Length = 337 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 74/313 (23%), Positives = 124/313 (39%), Gaps = 41/313 (13%) Query: 26 FDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLLISSMTGGNNKMIE-----RINRNL 79 + W I + + + VD S+E GKK +P + N + N+ L Sbjct: 49 YQKWQEIRVNMDTLCAPKAVDTSLELFGKKFKYPFFAGPVGAVNLHYSDAYDDVSYNKVL 108 Query: 80 AIAAEKTKVAMAVG---SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A + + G + +VM + +AI + P TV NL ++ D V+K Sbjct: 109 VSACAENGIVAFTGDGTNPKVMEAATDAI-ALAGGMGVP-TVKPWNLDTIREKMDL-VKK 165 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + D L L+ + P G + DL + IA ++ A P ++K V Sbjct: 166 SGAFAVAMDVDAAGLPF--LKNMDPPAGGKSVEDLKA-IAEMAGA---PFIVKGV----- 214 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPY 255 M ++ LK A G + + +H G QD T L E+ + Sbjct: 215 -MTVKGALK--------AKEAGAAAIVVSNH-------GGRVQDQCPATAEVLPEIVKAV 258 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIV 314 + GG+R+GVDI K++ LGA +A PF+ + + V A I+ L E Sbjct: 259 GGSMKIFVDGGIRSGVDIFKALALGADAVIIARPFVTAVYGGAEEGVKAYIDKLAGELAD 318 Query: 315 SMFLLGTKRVQEL 327 +M + G + E+ Sbjct: 319 TMAMCGAFSLDEI 331 >gi|189191088|ref|XP_001931883.1| cytochrome b2, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973489|gb|EDU40988.1| cytochrome b2, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 413 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 38/202 (18%) Query: 144 LGADGLFLHLNPLQEIIQ--------PNGNTNFADLSSKI-ALLSSAMDVPLLLKEVGCG 194 LGA GL + ++ I+ + NT L+ ++ L + D+PL+ K G Sbjct: 219 LGAKGLVITVDSAGSAIRHRAARYGVGSANTQLTKLTWEVFQQLQNLTDLPLIPK----G 274 Query: 195 LSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA- 252 + ++ D + +K G++ ++ GG R ++ G P+ L + M Sbjct: 275 IQTVEDTQEAVKQGVKAVFLSNHGG---------RQID----------GSPSTLQVAMEI 315 Query: 253 ----RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + + A GG+R G DILK + LG G+ PF+ + +D V A + L Sbjct: 316 HQRDPELFKKIEIYADGGIRYGTDILKLLALGVKAVGVGRPFMFANIYGADGVKKAADLL 375 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 + E I+ +G ++ + L+ Sbjct: 376 KNELIMDAANMGVSDLKNVPLD 397 >gi|118471237|ref|YP_890482.1| glutamate synthase family protein [Mycobacterium smegmatis str. MC2 155] gi|118172524|gb|ABK73420.1| glutamate synthase family protein [Mycobacterium smegmatis str. MC2 155] Length = 446 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG + D++L + SG + G +GGT+ + Sbjct: 209 TGPDDLTIKINELREITDWEKPIYVK-VGATRTYYDVKLAVHSGADVVVVDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 LALGA 321 >gi|297279703|ref|XP_001113689.2| PREDICTED: hydroxyacid oxidase 2 isoform 2 [Macaca mulatta] Length = 364 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 221 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 278 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGARCIFLGRPILWGL 320 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 321 AYKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|242046290|ref|XP_002461016.1| hypothetical protein SORBIDRAFT_02g039240 [Sorghum bicolor] gi|241924393|gb|EER97537.1| hypothetical protein SORBIDRAFT_02g039240 [Sorghum bicolor] Length = 367 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDS 297 D+ PT +LE + + + GG+R G D+LK++ LGA + P F A Sbjct: 262 DYAPPTISALEEVVKAVAGAVPVLVDGGVRRGTDVLKALALGAKAVMVGRPVFYGLAARG 321 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 IE L KE ++M L G + V E+ Sbjct: 322 EAGARHVIEMLNKELELAMALCGCRSVAEV 351 >gi|332237820|ref|XP_003268106.1| PREDICTED: hydroxyacid oxidase 2 isoform 1 [Nomascus leucogenys] Length = 351 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 208 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 264 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 265 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 307 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 308 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|307244419|ref|ZP_07526530.1| class II glutamine amidotransferase [Peptostreptococcus stomatis DSM 17678] gi|306492238|gb|EFM64280.1| class II glutamine amidotransferase [Peptostreptococcus stomatis DSM 17678] Length = 338 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 62/313 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 + +IH+ + E D +++ GK+L P++ + +TG I + EK Sbjct: 58 NMRVIHKVV------EPDMTIDLFGKELDLPVMAAPITG-------TILNMGGLVTEKEY 104 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-------------- 133 + + V+ N + A +L+ NL V YD Sbjct: 105 I------EPVIEGCKNMGTYAMVGDTAVPQILLDNL-EVMEKYDGAGIVFIKPWENGNII 157 Query: 134 --VQKAHQAVHVLGADGLFLHLNPLQEI-IQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 ++KA +A GA + + L+ + ++ +G FA +I L ++ D+P +LK Sbjct: 158 EKIKKAEKA----GALAVGVDLDACGLVTLKLHGTPVFAKNIDEIRELVNSTDLPFILKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ + + +++G+ ++ GG R++ + +D+ LS E Sbjct: 214 I---MTPDEALMAVEAGVYGIVVSNHGG----RVQDYTPGTADV------------LS-E 253 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 +A+ + GG+R GVD+LK + LGA + PF+ + + V I L+ Sbjct: 254 IAKAVDGRIKVFVDGGIRTGVDVLKMLALGADACLIGRPFITASFGGQTQGVEMYISRLK 313 Query: 310 KEFIVSMFLLGTK 322 + +M L G + Sbjct: 314 ADLEAAMVLTGCQ 326 >gi|146305839|ref|YP_001186304.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas mendocina ymp] gi|145574040|gb|ABP83572.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas mendocina ymp] Length = 389 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 39/182 (21%) Query: 153 LNPLQEIIQP-NGNT-----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + PLQ +P NG+ +ADL+ L +P+LLK + +S D Sbjct: 215 MRPLQAQAEPHNGSLLLGGPLLAAAPTWADLT----WLREQTRLPILLKGI---MSGADA 267 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 E L +G+ ++ GG + + + D+ ++ Q PL L+ Sbjct: 268 EQALTAGMDGLIVSNHGGRTLDGLPATIDVLPEVAAAVQG---RVPLLLD---------- 314 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA--IESLRKEFIVSMFL 318 GG+R G DILK++ LGA + P++ A+ ++ A+ A ++ LR E V+M L Sbjct: 315 ----GGIRRGSDILKALALGADAVLVGRPYVF-ALATAGAIGVAHVLQLLRAELEVAMAL 369 Query: 319 LG 320 G Sbjct: 370 TG 371 >gi|322703592|gb|EFY95199.1| peroxisomal (S)-2-hydroxy-acid oxidase [Metarhizium anisopliae ARSEF 23] Length = 403 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLL 319 I GG+R G D+ K+I LGA L + P L A D V A + L +E +M L Sbjct: 319 IILDGGIRRGADVFKAIALGADLVWIGRPVLWGLAYDGDKGVGAVLNILERELSRTMALA 378 Query: 320 GTKRVQEL---YLNTA 332 G + + E+ YL A Sbjct: 379 GVREISEISSAYLAVA 394 >gi|297663906|ref|XP_002810399.1| PREDICTED: hydroxyacid oxidase 2-like isoform 1 [Pongo abelii] Length = 351 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 208 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 264 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 265 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 307 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 308 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|326674854|ref|XP_697567.3| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Danio rerio] Length = 918 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+L SK ++ LLK+ + S D+ L K +F Sbjct: 687 HFNHAVMILQSEGHNIFANLCSK-----EYCNMMQLLKQ---AILSTDLTLYFKKRTTFF 738 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 D G SWS E HRD+ D+G V + W I Sbjct: 739 DCVLSGQFSWSD-EEHRDMFRSMLMTACDLGAVTRPWEI 776 >gi|7705393|ref|NP_057611.1| hydroxyacid oxidase 2 [Homo sapiens] gi|54234014|ref|NP_001005783.1| hydroxyacid oxidase 2 [Homo sapiens] gi|13124287|sp|Q9NYQ3|HAOX2_HUMAN RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Cell growth-inhibiting gene 16 protein; AltName: Full=Long chain alpha-hydroxy acid oxidase; AltName: Full=Long-chain L-2-hydroxy acid oxidase gi|7208438|gb|AAF40200.1|AF231917_1 long-chain 2-hydroxy acid oxidase HAOX2 [Homo sapiens] gi|12043434|emb|CAC19798.1| hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|18089187|gb|AAH20863.1| Hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|46981963|gb|AAT08030.1| growth-inhibiting protein 16 [Homo sapiens] gi|119577103|gb|EAW56699.1| hydroxyacid oxidase 2 (long chain), isoform CRA_b [Homo sapiens] gi|123996975|gb|ABM86089.1| hydroxyacid oxidase 2 (long chain) [synthetic construct] gi|157928974|gb|ABW03772.1| hydroxyacid oxidase 2 (long chain) [synthetic construct] Length = 351 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 208 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 264 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 265 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 307 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 308 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|332237822|ref|XP_003268107.1| PREDICTED: hydroxyacid oxidase 2 isoform 2 [Nomascus leucogenys] Length = 364 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 221 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 278 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 320 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 321 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|260803691|ref|XP_002596723.1| hypothetical protein BRAFLDRAFT_101689 [Branchiostoma floridae] gi|229281982|gb|EEN52735.1| hypothetical protein BRAFLDRAFT_101689 [Branchiostoma floridae] Length = 370 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 25/169 (14%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P+ +++ + +A L S +P++LK + L++ D L ++ G+ ++ GG Sbjct: 210 PDQSSDVSLSWKDVAWLRSICSLPIILKGI---LTAEDTRLAVQHGVDGILLSNHGG--- 263 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIIL 279 R L+ G+P + E+ + ++ + GG+R G D+LK++ L Sbjct: 264 ------RQLD----------GVPATIEALPEIVQAAGDKLEVYMDGGVRTGTDVLKALAL 307 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA + P + + V + L++EF ++M L G + ++++ Sbjct: 308 GARAVFIGRPAVWGLCYKGQEGVAKVLSILKEEFSLAMALSGCRSLRDI 356 >gi|134080434|emb|CAK41183.1| unnamed protein product [Aspergillus niger] Length = 508 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 28/163 (17%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + S D L +K G+ + ++ GG R Sbjct: 329 DWMSAVTWLRKITDLPIAIKGIQ---SWEDAALCMKYGVHPW-LSNHGG---------RQ 375 Query: 230 LESDIGIVFQDWGIPTPLSLEMA-RPYCNE----AQFIASGGLRNGVDILKSIILGASLG 284 LE G P+ + +A +C E I GG+ G DI+K++ LGA Sbjct: 376 LE----------GAPSAVDTLLAIHTHCPEVFRRCDVIVDGGISRGSDIVKALALGAKGV 425 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL FL V AI L+ E +M LLG + L Sbjct: 426 GLGRAFLYALALGELGVDKAIRILKNEVETTMALLGVSSIDSL 468 >gi|297663908|ref|XP_002810400.1| PREDICTED: hydroxyacid oxidase 2-like isoform 2 [Pongo abelii] Length = 364 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 221 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 278 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 320 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 321 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|256851661|ref|ZP_05557049.1| L-lactate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260661622|ref|ZP_05862534.1| L-lactate oxidase [Lactobacillus jensenii 115-3-CHN] gi|282933659|ref|ZP_06339019.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] gi|256615619|gb|EEU20808.1| L-lactate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260547679|gb|EEX23657.1| L-lactate oxidase [Lactobacillus jensenii 115-3-CHN] gi|281302216|gb|EFA94458.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] Length = 408 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+R G + K++ LGA L G+ PFL A+ + V + I + EF + M L G Sbjct: 294 ILDSGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAKGVESVINQINNEFKILMQLTG 353 Query: 321 TKRVQEL 327 K V+++ Sbjct: 354 CKTVEDV 360 >gi|297205269|ref|ZP_06922665.1| L-lactate oxidase FMN-binding domain protein [Lactobacillus jensenii JV-V16] gi|297149847|gb|EFH30144.1| L-lactate oxidase FMN-binding domain protein [Lactobacillus jensenii JV-V16] Length = 408 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+R G + K++ LGA L G+ PFL A+ + V + I + EF + M L G Sbjct: 294 ILDSGVRRGSHVFKALALGADLVGIGRPFLYGLALGGAKGVESVINQINNEFKILMQLTG 353 Query: 321 TKRVQEL 327 K V+++ Sbjct: 354 CKTVEDV 360 >gi|56205790|emb|CAI23077.1| hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|119577102|gb|EAW56698.1| hydroxyacid oxidase 2 (long chain), isoform CRA_a [Homo sapiens] gi|194390066|dbj|BAG60549.1| unnamed protein product [Homo sapiens] Length = 364 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 221 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 278 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 320 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 321 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|332809864|ref|XP_003308337.1| PREDICTED: LOW QUALITY PROTEIN: hydroxyacid oxidase 2-like [Pan troglodytes] Length = 364 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K ++ ++ GG + + D +++ Sbjct: 221 LSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEV 277 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 278 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGL 320 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + L EF SM L G + V E+ N Sbjct: 321 ACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|116536083|ref|NP_001070664.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 1 [Homo sapiens] gi|332814829|ref|XP_003309379.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Pan troglodytes] Length = 489 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 293 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 344 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 345 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 382 >gi|7327961|emb|CAB82573.1| cyclic nucleotide phosphodiesterase 11A1 [Homo sapiens] gi|15128484|dbj|BAB62714.1| phosphodiesterase 11A1 [Homo sapiens] Length = 490 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 293 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 344 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 345 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 382 >gi|54024069|ref|YP_118311.1| putative glutamate synthase [Nocardia farcinica IFM 10152] gi|54015577|dbj|BAD56947.1| putative glutamate synthase [Nocardia farcinica IFM 10152] Length = 442 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 205 TGPDDLAIKIVELREITDWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAAT 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+R+G D+ K+ Sbjct: 264 Q-----------DVFIEHVGIPTLAAIPQAVQALQELGVHRSVQLIVSGGIRSGADVAKA 312 Query: 277 IILGA 281 + LGA Sbjct: 313 MALGA 317 >gi|288561338|ref|YP_003424824.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] gi|288544048|gb|ADC47932.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] Length = 495 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 72/310 (23%), Positives = 124/310 (40%), Gaps = 76/310 (24%) Query: 18 GIDRNKKFFDDWHLIHRAL---PEISFDEVDPSVEFLGKKLS-------FPLLISSMTGG 67 G+ R FDD ++ + P S+ E + LG + + P++I +M+ G Sbjct: 115 GLTRRIPSFDDLSILPAQVSRPPIDSYRETCKTSVVLGDRFAENPIEIDTPIMIGAMSFG 174 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRV----------MFSDHNAIKSFELRQYAPHT 117 A++ E K+A+A+GS +V M + + QYA Sbjct: 175 ------------ALSKE-AKIALAIGSSKVGSITNTGEGGMLPEERHYADKLIAQYASGR 221 Query: 118 VLIS-----NLGAVQLNYDFGVQKA---HQAVHVLGADGLFLH--------LNPLQ--EI 159 +S N AV++ G + H H + A+ + L+P + +I Sbjct: 222 FGVSASYLNNAEAVEIKIGQGAKSGMGGHLLAHKVTAEVARVRNIPEGTSALSPARHMDI 281 Query: 160 IQPNGNTNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + P DL KI L D VP+++K G D+++ K+G + G Sbjct: 282 VGPE------DLGMKINQLREITDWKVPIIVK-FASGRVEQDVKIAAKAGADIIVVDGMQ 334 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLRNGV 271 G + + E +V + GIPT ++ A +E +A+GG+R+G Sbjct: 335 GGTGAGPE----------VVTEHAGIPTIEAIVKADDALKEINLRSEVSLVAAGGIRSGA 384 Query: 272 DILKSIILGA 281 D+ K+I LGA Sbjct: 385 DVAKAIALGA 394 >gi|196012908|ref|XP_002116316.1| hypothetical protein TRIADDRAFT_50856 [Trichoplax adhaerens] gi|190581271|gb|EDV21349.1| hypothetical protein TRIADDRAFT_50856 [Trichoplax adhaerens] Length = 365 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I+ L + + +++K + L++ D ++ GI+ I+ GG R L+ Sbjct: 218 ISWLQTITSLQVIVKGI---LTAEDASEAIRRGIKAIWISNHGG---------RQLD--- 262 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+PT + + E+ +A+ GG R G D+ K++ LGA + P L Sbjct: 263 -------GVPTAIEVLPEIVEAVKEQAEIYVDGGFRLGTDVFKALALGARAVFIGRPILW 315 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + SD V ++ L++E +M L G + ++ Sbjct: 316 GLCYNGSDGVKKVLQLLKEELQRTMQLAGCTSIGDI 351 >gi|212544344|ref|XP_002152326.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210065295|gb|EEA19389.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 489 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA---IESLRKEFIVSM 316 Q GG+R G D++K++ LGA+ G+ PFL +M S I +R+E +M Sbjct: 399 QIFIDGGVRRGTDVVKALALGATAVGMGRPFLY-SMASGYGEAGTRRMIGIMREEIEQNM 457 Query: 317 FLLGTKRVQEL---YLNTA 332 L+G ++ EL LNT+ Sbjct: 458 ALVGVTKISELRRELLNTS 476 >gi|169596887|ref|XP_001791867.1| hypothetical protein SNOG_01213 [Phaeosphaeria nodorum SN15] gi|111069742|gb|EAT90862.1| hypothetical protein SNOG_01213 [Phaeosphaeria nodorum SN15] Length = 496 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + GG++ G D++K++ LGA G+ + Sbjct: 375 DTAPPAVHTLLEIRKYCPEVFDRIEVWVDGGIKRGTDVVKALCLGARGVGVGRAALFGLG 434 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALI 334 + V +E L+ E M LLG +RV++L ++NT + Sbjct: 435 AGGKEGVARVLEILKAETETCMRLLGVERVEDLGMQHINTRAV 477 >gi|325959762|ref|YP_004291228.1| glutamate synthase (NADPH) [Methanobacterium sp. AL-21] gi|325331194|gb|ADZ10256.1| Glutamate synthase (NADPH) [Methanobacterium sp. AL-21] Length = 499 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 53/289 (18%) Query: 26 FDDWHLIHRA---LPEISFDEVDPSVEFLGK------KLSFPLLISSMTGGNNKMIERIN 76 DD + + LP + D V S+ LGK KLS P++IS ++ G ++ Sbjct: 128 LDDLYFVPAQVMILPLNATDPVKTSI-VLGKDAKKPLKLSSPIMISGLSFG------AVS 180 Query: 77 RNLAIAAEKTKVAMAVGSQ--------RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 ++ I KT + VG + S + + ++ ++ N A+++ Sbjct: 181 KSAKIVISKTASNLNVGFNSGEGGVLDEELESSKTMVVQYSTGRFGVEDEILKNAAAIEI 240 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP-----NGNTNFA-----------DLS 172 + G G +L + E + NG ++ DL Sbjct: 241 RFGQGAYPGK---------GSYLPAEKMTEEVSSKRNLENGEPAYSPAHHPDILTPRDLK 291 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 K++ L + ++GCG D+++ +++G+ + + G GG + + + + + Sbjct: 292 KKVSKLRRMSSGAPIGAKIGCGNVEDDVKVLVEAGVDFIALDGFGGGTGA---TDKYVRE 348 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 ++GI +LE +P I SGGLR+ D K + LGA Sbjct: 349 NVGIPIFSALPRAKQTLENLKPK-RRVSLIGSGGLRSSADFAKCLALGA 396 >gi|209550452|ref|YP_002282369.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536208|gb|ACI56143.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 380 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVTLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALI 334 ++ ++N+++I Sbjct: 367 DIK--HVNSSII 376 >gi|298707257|emb|CBJ25884.1| Glycolate Oxidase [Ectocarpus siliculosus] Length = 404 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 6/93 (6%) Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAA 304 P ++ R C + GG+R G D+LK++ LGAS + P + S + V Sbjct: 310 PEVVQAVRGRC---EIFVDGGIRRGTDVLKALALGASAVFIGRPVIWGLAHSGEHGVTDV 366 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 I L +E + +M L+G K++ + + +++ HQ Sbjct: 367 INLLNEELVQAMRLMGCKKLGD--IERSMVAHQ 397 >gi|254473122|ref|ZP_05086520.1| L-lactate dehydrogenase (cytochrome) protein [Pseudovibrio sp. JE062] gi|211957843|gb|EEA93045.1| L-lactate dehydrogenase (cytochrome) protein [Pseudovibrio sp. JE062] Length = 384 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G P+ + + E+ ++ + GG+R+G D+LK+I LGA + PFL Sbjct: 283 GAPSSIEILPEIVDEVGDKVEIHIDGGIRSGQDVLKAICLGAKGTYIGRPFLYGLGAGGK 342 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++E L+KE +M L G + + L Sbjct: 343 QGVTQSLEILQKELDTTMALCGRRDLNTL 371 >gi|189204292|ref|XP_001938481.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985580|gb|EDU51068.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 509 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESL 308 +AR + + + GG+R DI+K++ LGA G+ PFL AM + V A++ L Sbjct: 388 LARGWQDRIEVYIDGGVRRATDIIKAVALGAKGVGIGRPFLY-AMSAYGLPGVDRAMQLL 446 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + E ++M L+G + +L Sbjct: 447 KDEMEMNMRLIGASSIADL 465 >gi|189346746|ref|YP_001943275.1| ferredoxin-dependent glutamate synthase [Chlorobium limicola DSM 245] gi|189340893|gb|ACD90296.1| ferredoxin-dependent glutamate synthase [Chlorobium limicola DSM 245] Length = 545 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 24/140 (17%) Query: 153 LNPLQEIIQPN------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L P +E + P+ +F DLS +I + +P+ K + DI+ L + Sbjct: 313 LRPYEEAVSPSRFPDLYTPEDFRDLSEEIREATGG--IPIGFKMSAQHIER-DIDFALDA 369 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY---CNEAQ--F 261 G Y + GRGG + + + ++ GIPT +L AR + C A Sbjct: 370 GADYIILDGRGGGTGASPD----------LLKYHTGIPTIPALARARAHLDRCGAASVSL 419 Query: 262 IASGGLRNGVDILKSIILGA 281 + +GGLR D LK++ LGA Sbjct: 420 VITGGLRTETDYLKALALGA 439 >gi|154294051|ref|XP_001547469.1| hypothetical protein BC1G_14059 [Botryotinia fuckeliana B05.10] gi|150845104|gb|EDN20297.1| hypothetical protein BC1G_14059 [Botryotinia fuckeliana B05.10] Length = 471 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD--AVVAAIESLRK 310 R + N + GG+R DI+K++ LGA G+ PFL AM + V A++ L+ Sbjct: 357 RGWENRIEIYIDGGVRRSTDIIKALCLGAKGVGIGRPFLY-AMSAYGLAGVDRAMQLLKD 415 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 E ++M L+G V + LN LI Sbjct: 416 EMEMNMRLIGCSSVDQ--LNPTLI 437 >gi|71279242|ref|YP_268810.1| FMN-dependent dehydrogenase [Colwellia psychrerythraea 34H] gi|71144982|gb|AAZ25455.1| FMN-dependent dehydrogenase [Colwellia psychrerythraea 34H] Length = 381 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 P P+ + E+ ++ + I GG+R G DI+K+I LGA++ + ++ A Sbjct: 285 PAPIDIIQEIRAAVGDDIEIIVDGGIRRGSDIIKAIALGANVCSIGRAYVYGLAAGGQAG 344 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V AI L+ E M LLG + + LN ++IR + Sbjct: 345 VEHAITLLKSEVERDMALLGCTELSQ--LNPSMIRDR 379 >gi|217072538|gb|ACJ84629.1| unknown [Medicago truncatula] Length = 91 Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A D V ++ LR EF ++M L G + Sbjct: 10 GGVRRGTDVFKALALGASGVFIGRPVVFSLAADGEAGVRKVLQILRDEFELTMALCGCRS 69 Query: 324 VQEL 327 ++E+ Sbjct: 70 LKEI 73 >gi|298290469|ref|YP_003692408.1| ferredoxin-dependent glutamate synthase [Starkeya novella DSM 506] gi|296926980|gb|ADH87789.1| ferredoxin-dependent glutamate synthase [Starkeya novella DSM 506] Length = 445 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL KI L D P+ +K VG D L +KSG + G +GGT+ ++ Sbjct: 212 DLEIKIEELREITDWEKPIYVK-VGAARPYYDTALAVKSGADVVVVDGMQGGTAATQ--- 267 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILG 280 I + GIPT ++ A + Q I SGG+RNG D+ K++ LG Sbjct: 268 --------EIFIEHVGIPTLAAVRQAVKALQDLGMHRKVQLIVSGGIRNGADVAKALALG 319 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESL 308 A + + L D+ A E+L Sbjct: 320 ADAVAIGTAALVALGDNDPHYQAEYEAL 347 >gi|283850740|ref|ZP_06368027.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio sp. FW1012B] gi|283573983|gb|EFC21956.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio sp. FW1012B] Length = 342 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLL 319 +A GG+R G D+LK + LGA + P + A ++ V ++ LR E +M L Sbjct: 264 ILADGGVRTGADVLKYLALGADAVLVGRPLVTGAFGGGAEGVAFLLQKLRAELASAMLLT 323 Query: 320 GTKRVQEL 327 GT V+E+ Sbjct: 324 GTASVREV 331 >gi|312214401|emb|CBX94393.1| hypothetical protein [Leptosphaeria maculans] Length = 388 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%) Query: 245 TPLSLEMARPYCNE-------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 +P +LE+A NE + A GG+R G D+LK + LG GL PF+ + Sbjct: 284 SPSALEIALEIFNEDPAVFKEVEVYADGGVRYGTDVLKLLALGVRAVGLGRPFMFANVYG 343 Query: 298 SDAVVAAIESLRKEFIVSMFLLGT---KRVQELYLN 330 ++ V A++ L+ E LG K++ Y+N Sbjct: 344 AEGVKKAVDVLKYEIANDAANLGVGDLKKIGPEYVN 379 >gi|326773900|ref|ZP_08233182.1| L-lactate dehydrogenase [Actinomyces viscosus C505] gi|326636039|gb|EGE36943.1| L-lactate dehydrogenase [Actinomyces viscosus C505] Length = 422 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 P P L E+ R +A + G+ NG D++ ++ LGA G + +L M + Sbjct: 309 PVPFRLLPEVVREVGKDATIMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREG 368 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L E I +M LLG + EL Sbjct: 369 VDRMIEILSDEVIRTMKLLGVSSLDEL 395 >gi|210609777|ref|ZP_03288109.1| hypothetical protein CLONEX_00293 [Clostridium nexile DSM 1787] gi|210152779|gb|EEA83785.1| hypothetical protein CLONEX_00293 [Clostridium nexile DSM 1787] Length = 338 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 E+A+ + + GG+R+GVD+ K++ LGA + PF+ A +D V IE + Sbjct: 253 EIAKAVKGKMKIFVDGGIRSGVDVFKALALGADGVIICRPFVTAAYGGGTDGVQLYIERI 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M + G ++E+ Sbjct: 313 GSELADTMAMCGANSLKEI 331 >gi|320584017|gb|EFW98229.1| Cytochrome b2 [Pichia angusta DL-1] Length = 509 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 265 GGLRNGVDILKSIILGAS---LG-GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 GG+R G DILK++ LG +G GL PFL + + V AI+ L+ E + M LL Sbjct: 407 GGVRRGTDILKALALGGQNVRVGVGLGRPFLYANSSYGENGVRKAIQLLKDELEMDMRLL 466 Query: 320 GTKRVQEL 327 G + ++EL Sbjct: 467 GVRNLREL 474 >gi|291224809|ref|XP_002732395.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 443 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + + GG+R G D+LK+I LGA L P L A + Sbjct: 267 GVPATIDVLSEVVQAVNGQVEVYLDGGVRTGTDVLKAIALGAKCVFLGRPALWGLAYNGK 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++ ++ EF ++M L G V ++ Sbjct: 327 EGVQQVLQIIKDEFSLAMALSGCCTVSDI 355 >gi|190892878|ref|YP_001979420.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190698157|gb|ACE92242.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 380 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVTLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALIRHQ 337 + + +N ++I Q Sbjct: 367 DIND--VNASIISGQ 379 >gi|168011949|ref|XP_001758665.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690275|gb|EDQ76643.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGAS + P + A D V ++ LR EF ++M L G + Sbjct: 289 GGVRRGTDVLKALALGASGVFIGRPVVFGLACDGQQGVEKVLQMLRDEFELAMALAGCTK 348 Query: 324 VQEL 327 V ++ Sbjct: 349 VSDI 352 >gi|148255844|ref|YP_001240429.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Bradyrhizobium sp. BTAi1] gi|146408017|gb|ABQ36523.1| Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Bradyrhizobium sp. BTAi1] Length = 378 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 42/331 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN+ D+ R L ++S +VD SVE G+++ PL+++ + G ++ + Sbjct: 57 RNRMALDEIAFRPRVLRDVS--KVDASVERFGRRMRLPLVMAPV--GALEIFDPAGAAAV 112 Query: 81 I-------AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN---- 129 AA G +R + +A++ F+L + + N Sbjct: 113 ARGAGRFGAAHMLSSVSEPGLERTAEAAPDALRIFQLYVRGDDAFVEDYVSRAVANSYTA 172 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + V AH + ++ + L+ G+ A + L+ +PL++K Sbjct: 173 FCLTVDTAHYSRRERDIAKRYVRESRLRAT---GGDHQKALSWHTVKLIKDKFKLPLIIK 229 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + ++ D + + G+ + ++ GG R L+ G + +P Sbjct: 230 GIA---TAEDAHIAVDHGVDWIYVSNHGG---------RQLDHGRGAMHV---LP----- 269 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESL 308 E+ A+ + GG G DI+K+I GA L G+ A D +V +E L Sbjct: 270 EIVAAVNGRAKIMVDGGFCRGTDIVKAIACGADLVGVGRLQCWALAAAGEDGIVRMLELL 329 Query: 309 RKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 E I ++ LLG EL YL+ A H Sbjct: 330 EDEVIRTLGLLGLASFAELNTSYLHPATAPH 360 >gi|193208036|ref|NP_001122941.1| hypothetical protein F41E6.5 [Caenorhabditis elegans] gi|169404808|gb|ACA53536.1| Hypothetical protein F41E6.5b [Caenorhabditis elegans] Length = 371 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES-L 308 E+ R N GG+RNG DILK++ LGA + P L S A V+A+ L Sbjct: 280 EVLRAVDNRIPVWMDGGVRNGRDILKAVALGARGVFVGRPVLWGLATSGSAGVSAVLGLL 339 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 + EF ++ L G + ++EL + I H Sbjct: 340 QSEFYHALQLSGFRSIKELQNDKHAIVH 367 >gi|322695042|gb|EFY86857.1| mitochondrial cytochrome b2 [Metarhizium acridum CQMa 102] Length = 521 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC E + GG++ G DI+K++ LGA GL + Sbjct: 367 DTAPPAVHTLLEIRKYCPEVFSKIEVWVDGGIKRGTDIVKALCLGAKAVGLGRAALFGLG 426 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E L E M LLG K++ EL Sbjct: 427 AGGQAGVERTLEILEAETATCMRLLGVKKISEL 459 >gi|84683559|ref|ZP_01011462.1| L-lactate dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84668302|gb|EAQ14769.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 383 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 23/155 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A + +A D P+++K + L D+E + G++ ++ GG R L+ + Sbjct: 240 VARVRAAWDGPMIVKGL---LHPDDVEAARRIGVQGISVSNHGG---------RQLDGSL 287 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--LGGLASPFLK 292 V +P +M ++ + + G+R G DILK+ LGAS L G A + Sbjct: 288 SAVA---ALP-----DMVATAGDDMEVLLDSGVRRGTDILKARALGASGVLIGRAWAYGL 339 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V AIE LR E +M LLG + + L Sbjct: 340 AAAGEA-GVDKAIELLRDEMTNAMMLLGEREIAAL 373 >gi|296412260|ref|XP_002835843.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629638|emb|CAZ80000.1| unnamed protein product [Tuber melanosporum] Length = 388 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (48%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 E A +E A GG+R G DILK + LG GL PF+ + + V I+ L+ Sbjct: 291 ENAPEVFSETFVFADGGVRYGTDILKLLALGVKAVGLGRPFMYSNVFGREGVQYLIDLLK 350 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E V LG +++L Sbjct: 351 EELTVDASNLGVADLKQL 368 >gi|227894016|ref|ZP_04011821.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus ultunensis DSM 16047] gi|227864098|gb|EEJ71519.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus ultunensis DSM 16047] Length = 409 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A+ + + G+R G + K++ LGA L G+ P+L A+ V + I+ L Sbjct: 282 EIAKAVNHRVPIVFDSGVRRGSHVFKALALGADLVGIGRPYLYGLALGGPKGVESVIDQL 341 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E + M L G K ++++ Sbjct: 342 NTELKIDMQLTGCKTIEDI 360 >gi|145609487|ref|XP_001409518.1| hypothetical protein MGG_13441 [Magnaporthe oryzae 70-15] gi|145016849|gb|EDK01279.1| hypothetical protein MGG_13441 [Magnaporthe oryzae 70-15] Length = 365 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD--SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK++ LGAS G+ P L + V I LR E +M L G Sbjct: 281 GGVRRGTDVLKALALGASAVGVGRPALYSMTNGWGEAGVRRLIMMLRMEIETNMALAGAT 340 Query: 323 RVQEL---YLNTALIRHQ 337 R+ E+ +NT + H+ Sbjct: 341 RLGEVVPEMVNTERVEHE 358 >gi|225621423|ref|YP_002722682.1| FMN-dependent alpha-hydroxyacid oxidizing protein [Brachyspira hyodysenteriae WA1] gi|225216244|gb|ACN84978.1| FMN-dependent alpha-hydroxyacid oxidizing enzyme [Brachyspira hyodysenteriae WA1] Length = 337 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 65/313 (20%), Positives = 122/313 (38%), Gaps = 41/313 (13%) Query: 26 FDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERINRNL 79 +D W I + I +E +D S E GKK +P+ + GN E N L Sbjct: 48 YDKWREIRLNMDTICSNEDIDTSFELFGKKFKYPIFAGPVGAVQLHYGNKYTEEEYNDIL 107 Query: 80 AIAAEKTKVAMAVG---SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 + + +A G + VM + IK + TV N+ ++ Sbjct: 108 VKSCAEAGIAAFTGDGVNANVMIAATTMIK--KQNGIGVPTVKPWNIDVIKEKMKLVADS 165 Query: 137 AHQAVHV-LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 AV + + A GL P + + P + D +I ++ P ++K + + Sbjct: 166 NAFAVAMDVDAAGL-----PFLKNLTPKAGSKTVDELKQIKEIAKR---PFIIKGI---M 214 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ + +++G ++ GG + + ++ +P E+A Sbjct: 215 TAKGAKKAVEAGADAIIVSNHGGRVLDQCPATAEV------------LP-----EIADAV 257 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIV 314 + + + GG+RNG DILK+I LGA +A F+ A + V + + L E Sbjct: 258 KGKIKILVDGGIRNGTDILKAIALGADGVVIARTFVIAAYGGGEEGVKSYADQLGAELED 317 Query: 315 SMFLLGTKRVQEL 327 +M + G ++E+ Sbjct: 318 AMTMCGVHSLKEI 330 >gi|332296450|ref|YP_004438373.1| (S)-2-hydroxy-acid oxidase [Thermodesulfobium narugense DSM 14796] gi|332179553|gb|AEE15242.1| (S)-2-hydroxy-acid oxidase [Thermodesulfobium narugense DSM 14796] Length = 339 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVS 315 +A +A GG+R+GVD LK I LGA + P + A + S+ V IE +E + Sbjct: 260 KDAIVLADGGVRSGVDALKLIALGAKGVLVGRPLITGAFGAMSEGVKFIIEKYTQELYAA 319 Query: 316 MFLLGTKRVQEL 327 M L G K ++++ Sbjct: 320 MILTGCKSIKDI 331 >gi|321257975|ref|XP_003193767.1| cytochrome b2, mitochondrial precursor (L-lactate ferricytochrome C oxidoreductase) [Cryptococcus gattii WM276] gi|317460237|gb|ADV21980.1| Cytochrome b2, mitochondrial precursor (L-lactate ferricytochrome C oxidoreductase), putative [Cryptococcus gattii WM276] Length = 552 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 20/155 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I + ++P+++K V S D++L K+G++ ++ GG + DL + Sbjct: 393 IDFIRQHTNLPIIVKGV---QSVEDVDLCAKAGVQGVILSNHGGRQCDYAPAPIDLLYE- 448 Query: 235 GIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 L RP ++ + + GG+R+G D++K+I LGA G+ FL Sbjct: 449 --------------LRCNRPDLFDKIEVMMDGGVRSGADVVKAIALGAKAVGIGRSFLYA 494 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + L +E +M +G R+++L Sbjct: 495 NGTHGEEGVVRLCQILSEEITNTMRNIGAPRLEDL 529 >gi|225560517|gb|EEH08798.1| cytochrome b2 [Ajellomyces capsulatus G186AR] Length = 511 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L++ + Sbjct: 334 LPLVLKGV---MSADDAILAMKAGLDGILLSNHGG---------RNLDTSPPALV----- 376 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 T L L P ++ + GG+R G DILK++ LGA+ G+ L A + V Sbjct: 377 -TLLELHKRCPEIFDKMEIYVDGGIRRGTDILKAVCLGATAVGMGRSVLFAAAYGQEGVE 435 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + + E +M L+G + + + +NTA I H Sbjct: 436 HLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|307726257|ref|YP_003909470.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] gi|307586782|gb|ADN60179.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] Length = 381 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + G+ N+ FD L+ R L ++S E SV LG+++ FPL+I+ TG N+ + Sbjct: 37 ESGLTHNRSAFDKLQLLPRRLSDVSTRE--QSVALLGRRIPFPLVIAP-TGLNSAFWPKG 93 Query: 76 NRNLAIAAEKTKVAMAVGSQRVM 98 + LA AA K + A+ + M Sbjct: 94 DLALARAAGKAGIPFALSTASNM 116 >gi|325067960|ref|ZP_08126633.1| L-lactate dehydrogenase [Actinomyces oris K20] Length = 422 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 IP L E+ R +A + G+ NG D++ ++ LGA G + +L M + V Sbjct: 310 IPFRLLPEVVREVGKDATIMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREGV 369 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 IE L E I +M LLG + EL Sbjct: 370 DRMIEILSDEVIRTMKLLGVSSLDEL 395 >gi|308507173|ref|XP_003115769.1| hypothetical protein CRE_18764 [Caenorhabditis remanei] gi|308256304|gb|EFP00257.1| hypothetical protein CRE_18764 [Caenorhabditis remanei] Length = 371 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+RNG DI K++ LGA + P L A S V A + L+ EF SM L G + Sbjct: 295 GGVRNGRDIFKAVALGARGVFVGRPVLWGLATSGSSGVAAVLGILQSEFRHSMQLSGFRS 354 Query: 324 VQELYLNTALIRH 336 + EL + ++ H Sbjct: 355 IAELQKDDQVVVH 367 >gi|15966045|ref|NP_386398.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15075315|emb|CAC46871.1| (S)-2-hydroxy-acid oxidase [Sinorhizobium meliloti 1021] Length = 364 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 24/163 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L+ + D+PL+LK + + D + + G+ + ++ GG D+ Sbjct: 207 VKLIKDSYDIPLVLKGIA---TVEDARIAVDHGVDWIYVSNHGGRQLDHGRGTMDV---- 259 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKP 293 +P E+ +A+ + GG G DI+K++ +GA+L GL Sbjct: 260 --------LP-----EIIDAVGGQAKVMVDGGFCRGTDIIKALAIGANLVGLGRMQCYAL 306 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTAL 333 A A++ +E + E + SM LLG + +L YL A+ Sbjct: 307 AAGGEAAIIRMLELIEDEMLRSMALLGVPTIGDLDRSYLYPAV 349 >gi|281201933|gb|EFA76141.1| hydroxyacid oxidase [Polysphondylium pallidum PN500] Length = 366 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 86/357 (24%), Positives = 137/357 (38%), Gaps = 87/357 (24%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ +F L+ R L ++S VD LG LSFPL+I+ KM + Sbjct: 44 NQNYFSRIKLLPRCLIDVS--NVDMRTNVLGIDLSFPLMIAPT--AMQKMAHPVGETATW 99 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-------- 133 +A A +G+ + S + + + + + H N G QL Y F Sbjct: 100 SA-----ANELGTSMTLSS----LSTTSIEELSKHAN--GNPGWFQL-YVFKDRAITKNL 147 Query: 134 VQKAHQAVH---VLGADGLFL---HLNPLQEIIQPNGNT--NFADLS------------- 172 VQ+A Q + VL D +L + P+G NF+DL Sbjct: 148 VQRAEQIGYKAIVLTVDTPYLGRREADYRNGFRLPHGLKLQNFSDLPLADVEGGLNAYVA 207 Query: 173 ---------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L S +P+++K V +S D E+ + G+ ++ G Sbjct: 208 TMIDSSLTWKDLDWLKSITKLPIIVKGV---MSPRDAEIAVTHGVDAIIVSNHGA----- 259 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSII 278 R L++ P ++E+ PY +A I GG+R G DILK++ Sbjct: 260 ----RQLDT------------APSTIEVL-PYIVKAVNGRCPVILDGGVRRGTDILKALA 302 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 GA + P L A+ D V + L E +SM L G K + + +N +LI Sbjct: 303 CGAKAVMIGRPVLWGLAVGGKDGVKRVLSLLHDELKLSMALAGVKSISQ--INKSLI 357 >gi|146341043|ref|YP_001206091.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein glycolate oxidase [Bradyrhizobium sp. ORS278] gi|146193849|emb|CAL77866.1| Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein; putative Glycolate oxidase [Bradyrhizobium sp. ORS278] Length = 378 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 130/328 (39%), Gaps = 40/328 (12%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------GNNKMI 72 + RN+ D+ R L ++S VD SVE G++L P++++ + + Sbjct: 55 LRRNRMALDEIAFRPRVLRDVS--RVDASVELFGRRLRLPVVMAPVGALEIFDPAGAASV 112 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG-AVQLNYD 131 R A + V+ G ++ + +A++ F+L + +G AV NY Sbjct: 113 ARGAGRFGAAHMLSSVSEP-GLEKTAEAAPDALRIFQLYVRGDDAFVEDYVGRAVANNYT 171 Query: 132 ---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 V AH + ++ + L+ G+ A + L+ +PL++ Sbjct: 172 AFCLTVDTAHYSRRERDIAKRYVRESRLRAT---GGDHQKALSWHTVKLIKDKFRLPLII 228 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ D + L G+ + ++ GG R L+ G + +P Sbjct: 229 KGIA---TAEDAAIALDHGVDWIYVSNHGG---------RQLDHGRGAMHV---LP---- 269 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIES 307 E+ A+ + GG G DI+K+I GA + G+ A + ++ +E Sbjct: 270 -EIVAAVKGRAKILVDGGFCRGTDIVKAIASGADMVGIGRLQCWALAAAGENGILRMLEL 328 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTA 332 L E I ++ LLG EL YL+ A Sbjct: 329 LEDEVIRALGLLGVTSFAELNASYLHAA 356 >gi|295659458|ref|XP_002790287.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226281739|gb|EEH37305.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 499 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 28/160 (17%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L++ Sbjct: 334 LPLILKGV---MSADDAMLAMKAGLDGILLSNHGG---------RNLDT---------SP 372 Query: 244 PTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 P L+L C E + GG+R G DILK++ LGA+ G+ L + Sbjct: 373 PALLTLLELHKRCPEIFDKMEIYLDGGIRRGSDILKAVCLGATAVGMGRSVLFATNYGQE 432 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 V + ++ E +M L+G + E +NTA I H Sbjct: 433 GVEHLFDIMKDELEGAMRLVGITSLDEARPELVNTADIDH 472 >gi|86748261|ref|YP_484757.1| ferredoxin-dependent glutamate synthase [Rhodopseudomonas palustris HaA2] gi|86571289|gb|ABD05846.1| ferredoxin-dependent glutamate synthase [Rhodopseudomonas palustris HaA2] Length = 441 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 21/152 (13%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KI L D P+ +K +G D L +K+G I G +GGT+ + Sbjct: 206 TGPDDLEIKIEELREITDWEKPIYVK-IGASRPYYDTALAVKAGADVIVIDGMQGGTAAT 264 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+RNG DI K+ Sbjct: 265 Q-----------EVFIEHVGIPTLAAIRPAVEALQELGMHRKVQLIVSGGIRNGADIAKA 313 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + LGA + + L D+S ++ E+L Sbjct: 314 LALGADAVAIGTAALIALGDNSPSLEKDYEAL 345 >gi|307305599|ref|ZP_07585346.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] gi|307317540|ref|ZP_07596979.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306896698|gb|EFN27445.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306902302|gb|EFN32898.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] Length = 364 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 24/163 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L+ + D+PL+LK + + D + + G+ + ++ GG D+ Sbjct: 207 VKLIKDSYDIPLVLKGIA---TVEDARIAVDHGVDWIYVSNHGGRQLDHGRGTMDV---- 259 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKP 293 +P E+ +A+ + GG G DI+K++ +GA+L GL Sbjct: 260 --------LP-----EIIDAVGGQAKVMVDGGFCRGTDIIKALAIGANLVGLGRMQCYAL 306 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTAL 333 A A++ +E + E + SM LLG + +L YL A+ Sbjct: 307 AAGGEAAIIRMLELIEDEMLRSMALLGVPTIGDLDRSYLYPAV 349 >gi|145613343|ref|XP_363797.2| hypothetical protein MGG_01723 [Magnaporthe oryzae 70-15] gi|145020433|gb|EDK04562.1| hypothetical protein MGG_01723 [Magnaporthe oryzae 70-15] Length = 468 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DI+K++ LGA G+ PFL AM + V A++ L+ E ++M L+G Sbjct: 364 GGVRRGTDIIKALCLGAKGVGIGRPFLY-AMSAYGVQGVDRAMQLLKDELEMNMRLIGCT 422 Query: 323 RVQEL 327 + +L Sbjct: 423 SIDQL 427 >gi|119631452|gb|EAX11047.1| phosphodiesterase 11A, isoform CRA_a [Homo sapiens] Length = 989 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 793 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 844 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 845 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 882 >gi|119631454|gb|EAX11049.1| phosphodiesterase 11A, isoform CRA_c [Homo sapiens] Length = 990 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 793 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 844 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 845 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 882 >gi|146308482|ref|YP_001188947.1| glutamate synthase (NADPH) GltB2 subunit [Pseudomonas mendocina ymp] gi|145576683|gb|ABP86215.1| glutamate synthase (NADPH) GltB2 subunit [Pseudomonas mendocina ymp] Length = 440 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA L D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 205 TGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 264 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRQVQLIVSGGIRNGADVAKA 312 Query: 277 IILGA 281 + LGA Sbjct: 313 MALGA 317 >gi|304314315|ref|YP_003849462.1| glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] gi|302587774|gb|ADL58149.1| predicted glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] Length = 619 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 19/124 (15%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 T DL+ I LL D VP+++K +G G D+++ ++G + G G + + Sbjct: 408 TREGDLAKHIELLREVTDWRVPIVVK-LGPGRVYEDVQIAAEAGADVISVDGMEGGTGAA 466 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILKSI 277 E +V + G+PT +L A N E I +GG+R+G D+ K++ Sbjct: 467 PE----------VVIEHTGVPTLAALVQAVNGLNDIGLKDEVDLIITGGIRSGADVAKAM 516 Query: 278 ILGA 281 +GA Sbjct: 517 AMGA 520 >gi|47212121|emb|CAG06223.1| unnamed protein product [Tetraodon nigroviridis] Length = 373 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P L + E+ + GG+R G D+LK++ LGA + P L + Sbjct: 271 GVPATLDVLEEVVKAVQGRCDVYMDGGVRRGTDVLKALALGAKAVFIGRPVLWGLSCQGE 330 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ +E +++E ++M L G + V E+ Sbjct: 331 QGVIEVLELIKQELRLAMALSGCRSVSEV 359 >gi|320581996|gb|EFW96215.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia angusta DL-1] Length = 521 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 49/315 (15%) Query: 34 RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 R L +IS ++ + LG + + P ISS TG N E + LA AA + K+A V Sbjct: 192 RCLTDISNTSIETDI--LGVRTAAPFFISSFTGSNLIQPEG-EKILARAAAEEKIAYMVP 248 Query: 94 SQ---------------RVMFSDHNAIKSFELRQYAPH-----TVLISNLGAVQLNYDF- 132 + + +F H + ELR+ AP + + A+ +N D Sbjct: 249 KRGSVSLEQLHAETAHSQTLFYQHEFESAEELRE-APKLFKHIETTMPQVKAIFVNVDIA 307 Query: 133 --GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 G ++ V + A ++L L +P + D + + + ++P++LK Sbjct: 308 AHGHREKEYKVREMEAGKADVNLGGLLGS-EPEYVATWNDFET----VRKSTNLPIILK- 361 Query: 191 VGCGLSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 GL DI + G R I+ GG + + +++ ++ I Sbjct: 362 ---GLQRKEDILKAAELGFRGALISNTGGRQLDFSKPAIETLAEVHEALKEKNIDR---- 414 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 N+ Q GG G D++K++ LGA + G+ P L + V A + L+ Sbjct: 415 -------NQFQLFVEGGFSRGSDVIKALCLGA-IPGIGRPMLYSEVYGQKGVEKASQLLK 466 Query: 310 KEFIVSMFLLGTKRV 324 +E + + LLG V Sbjct: 467 EEILRDIKLLGASNV 481 >gi|264679808|ref|YP_003279717.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262210323|gb|ACY34421.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 413 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 36/157 (22%) Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRD------------------LESDIG---IVFQDWG 242 L SG D +GR +W IE R + +DIG IV + G Sbjct: 250 LLSGTAIRDTSGRDHLNWKNIERIRQRWKGNLIIKGILNEDDAVMATDIGAQGIVVSNHG 309 Query: 243 ------IPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + PL + PY + + G+R G D+LK++ LGA + L PF+ Sbjct: 310 GRQLDGVVAPLQML---PYVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVFLGRPFM 366 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V AI LR E +M +LG + E+ Sbjct: 367 YAAAVGGAQGVHHAITLLRDEVDRNMAMLGATSMAEI 403 >gi|224043933|ref|XP_002197696.1| PREDICTED: similar to MGC82107 protein isoform 2 [Taeniopygia guttata] Length = 348 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 23/155 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L+ D EL +K G++ ++ GG R L Sbjct: 205 IYWLRSLTRLPIIIKGI---LTKEDAELAVKHGVQGIIVSNHGG---------RQL---- 248 Query: 235 GIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 D G T +L E+ + GG+R G D+LK++ LGA + P L Sbjct: 249 -----DEGPATIDALVEVVEAVRGRVEVYVDGGIRKGSDVLKALALGAKCVFIGRPALWG 303 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + + L+ EF +SM L G V E+ Sbjct: 304 LAYKGEEGLQDVLRILQDEFRLSMALAGCASVSEI 338 >gi|224043931|ref|XP_002197677.1| PREDICTED: similar to MGC82107 protein isoform 1 [Taeniopygia guttata] Length = 355 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + L+ D EL +K G++ ++ GG R L+ Sbjct: 212 IYWLRSLTRLPIIIKGI---LTKEDAELAVKHGVQGIIVSNHGG---------RQLDEGP 259 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + +E+ + GG+R G D+LK++ LGA + P L Sbjct: 260 ATI--------DALVEVVEAVRGRVEVYVDGGIRKGSDVLKALALGAKCVFIGRPALWGL 311 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + + L+ EF +SM L G V E+ Sbjct: 312 AYKGEEGLQDVLRILQDEFRLSMALAGCASVSEI 345 >gi|119631456|gb|EAX11051.1| phosphodiesterase 11A, isoform CRA_e [Homo sapiens] Length = 991 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 794 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 845 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 846 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 883 >gi|332209440|ref|XP_003253819.1| PREDICTED: LOW QUALITY PROTEIN: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like [Nomascus leucogenys] Length = 933 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|215765674|dbj|BAG87371.1| unnamed protein product [Oryza sativa Japonica Group] Length = 365 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 27/161 (16%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + L + +P+L+K V +++ D L ++SG ++ G R L+ Sbjct: 215 TDVKWLQTITSLPILVKGV---MTAEDTRLAVESGAAGIIVSNHGA---------RQLDY 262 Query: 233 DIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P +S E+ R GG+R G D+ K++ LGAS G+ P Sbjct: 263 ----------VPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGAS--GIGRPV 310 Query: 291 L-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A+D V ++ LR E ++M L G + E+ N Sbjct: 311 LFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRN 351 >gi|71082849|ref|YP_265568.1| ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1062] gi|71061962|gb|AAZ20965.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1062] Length = 512 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 52/255 (20%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L P+ +S M+ G +E+ K+A+A G++ + L + Sbjct: 175 LKIPIFVSDMSFG-------------ALSEEAKIALAKGAEGAGTGICSGEGGMLLEEQK 221 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHL------NPLQEIIQ-PN 163 ++ L + + Y K QA H G G HL + E+ Q P Sbjct: 222 NNSKYFYELASAKFGYSEDKLKNIQAFHFKGGQAAKTGTGGHLPGNKVKGKISEVRQIPE 281 Query: 164 GN-----TNFADLSSKIALLSSAMDVPLLLK--EVGCGLSSM----DIELGLKSGIRYFD 212 G + F DL++ L + V L +G LS+ DIE + + Y Sbjct: 282 GEDAISPSTFKDLTTVDDFLKFSNRVRELTGGIPIGFKLSAQHIEDDIEFAVSASADYII 341 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCNEAQF-----IASGG 266 + GRGG + + ++F+D +PT +L AR Y ++ + I +GG Sbjct: 342 LDGRGGGTGAAP-----------LIFRDNISVPTIPALARARNYLDKKGYDHVSLIVTGG 390 Query: 267 LRNGVDILKSIILGA 281 LR D +K++ LGA Sbjct: 391 LRTSADFVKALALGA 405 >gi|91762728|ref|ZP_01264693.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1002] gi|91718530|gb|EAS85180.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1002] Length = 512 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 52/255 (20%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L P+ +S M+ G +E+ K+A+A G++ + L + Sbjct: 175 LKIPIFVSDMSFG-------------ALSEEAKIALAKGAEGAGTGICSGEGGMLLEEQK 221 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHL------NPLQEIIQ-PN 163 ++ L + + Y K QA H G G HL + E+ Q P Sbjct: 222 NNSKYFYELASAKFGYSEDKLKNIQAFHFKGGQAAKTGTGGHLPGNKVKGKISEVRQIPE 281 Query: 164 GN-----TNFADLSSKIALLSSAMDVPLLLK--EVGCGLSSM----DIELGLKSGIRYFD 212 G + F DL++ L + V L +G LS+ DIE + + Y Sbjct: 282 GEDAISPSTFKDLTTVDDFLKFSNRVRELTGGIPIGFKLSAQHIEDDIEFAVSASADYII 341 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCNEAQF-----IASGG 266 + GRGG + + ++F+D +PT +L AR Y ++ + I +GG Sbjct: 342 LDGRGGGTGAAP-----------LIFRDNISVPTIPALARARNYLDKKGYDHVSLIVTGG 390 Query: 267 LRNGVDILKSIILGA 281 LR D +K++ LGA Sbjct: 391 LRTSADFVKALALGA 405 >gi|27382520|ref|NP_774049.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27355692|dbj|BAC52674.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 25/145 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+LK + L D EL K+G + ++ GG R L+ G P+ Sbjct: 249 LVLKGI---LDVEDAELAAKTGAQAIVVSNHGG---------RQLD----------GAPS 286 Query: 246 PLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + + E+ + + + GG+R+G D+++++ LGA + + A VA Sbjct: 287 SIEVLPEIVDAVGDRMEIMFDGGIRSGQDVMRALALGAKSCMIGRAYAYGLGAGGQAGVA 346 Query: 304 -AIESLRKEFIVSMFLLGTKRVQEL 327 AI+ ++KE + +M L G R++E+ Sbjct: 347 KAIDIIQKELLTTMGLCGVNRIEEI 371 >gi|168033163|ref|XP_001769086.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679720|gb|EDQ66164.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGAS + P + A D V ++ LR EF ++M L G + Sbjct: 289 GGVRRGTDVLKALALGASGVFIGRPVVFGLATDGQKGVENVLQMLRSEFELAMALAGCTK 348 Query: 324 VQEL 327 V ++ Sbjct: 349 VSDI 352 >gi|242278937|ref|YP_002991066.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio salexigens DSM 2638] gi|242121831|gb|ACS79527.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio salexigens DSM 2638] Length = 336 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIES 307 E++R + + GG+R G+D+LK + LGA + PF + + V I+ Sbjct: 250 FEISRAVAGQCAVMVDGGVRTGIDVLKMLALGADAVMIGRPFSIATVGGLQEGVEKYIDQ 309 Query: 308 LRKEFIVSMFLLGTKR 323 L+ E ++ L GT++ Sbjct: 310 LKAELTAAIVLTGTEK 325 >gi|149187525|ref|ZP_01865822.1| putative glutamate synthetase [Vibrio shilonii AK1] gi|148838405|gb|EDL55345.1| putative glutamate synthetase [Vibrio shilonii AK1] Length = 515 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 96/256 (37%), Gaps = 51/256 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PL +S M+ G +E+ KV++A G++ + + Sbjct: 179 KLNIPLFVSDMSFG-------------ALSEEAKVSLATGAELAGTGICSGEGGMLPEEQ 225 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + YD K+ QA H G G HL + I + P Sbjct: 226 AANSRYFYELASAGFGYDESKLKSVQAFHFKGGQGAKTGTGGHLPGNKNIGKISQVRGIP 285 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL++ A V + + G DI+ L + Y Sbjct: 286 EGEPAISPPTFKDLNTAEDFRRFADRVREVTGGIPIGFKLSANHIEEDIQFALDASADYI 345 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + E RD S +PT +L AR Y ++ I +G Sbjct: 346 ILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARRYLDQQGASGRVTLIITG 395 Query: 266 GLRNGVDILKSIILGA 281 GLR +D +K++ LGA Sbjct: 396 GLRVPMDFVKALALGA 411 >gi|73981246|ref|XP_533023.2| PREDICTED: similar to Hydroxyacid oxidase 2 (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) [Canis familiaris] Length = 353 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 210 LSWLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVLASIDALAEV 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 267 VAAVK-----------------GKMEVYLDGGIRTGNDVLKALALGAKCVFLGRPILWGL 309 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + ++ EF SM L G + V E+ Sbjct: 310 AYKGEYGVEEVLNIIKNEFHTSMALTGCRSVAEI 343 >gi|127513912|ref|YP_001095109.1| ferredoxin-dependent glutamate synthase [Shewanella loihica PV-4] gi|126639207|gb|ABO24850.1| ferredoxin-dependent glutamate synthase [Shewanella loihica PV-4] Length = 516 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 107/283 (37%), Gaps = 61/283 (21%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L PLL+S M+ G +E+ KVA+A G++ + + Sbjct: 182 RLKIPLLVSDMSFG-------------ALSEEAKVALAKGAELAGTGICSGEGGMLPEEQ 228 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLN--------------P 155 A ++ L + Q Y + QA H G G HL P Sbjct: 229 AANSRYFYELASAQFGYQEALMAKIQAFHFKGGQGAKTGTGGHLPGSKNQGKIAQIRGIP 288 Query: 156 L-QEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 Q+ I P N +F + ++ LS VP+ K + DI+ L + Sbjct: 289 AGQDAISPPRFRELNSVADFKRFADRVRELSGG--VPIGFK-LSANHIERDIQFALDASA 345 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFI 262 Y + GRGG + + + RD S +PT +L AR Y ++ I Sbjct: 346 DYIILDGRGGGTGAAPQIFRDHIS----------VPTIPALARARRYLDQQGASGRVTLI 395 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 +GGLR +D +K++ LGA LA+ AM + V A I Sbjct: 396 ITGGLRLPMDFVKAMALGADGVALAN----SAMQAIGCVAARI 434 >gi|260786703|ref|XP_002588396.1| hypothetical protein BRAFLDRAFT_63347 [Branchiostoma floridae] gi|229273558|gb|EEN44407.1| hypothetical protein BRAFLDRAFT_63347 [Branchiostoma floridae] Length = 371 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 75/350 (21%), Positives = 134/350 (38%), Gaps = 66/350 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N++ F + LI R L ++ D SV LG KL FP+ I+ T + A Sbjct: 41 NRRAFKRYRLIPRNLRDVYIR--DTSVTILGTKLDFPVAIAP-TATHLLFHPEAELTTAR 97 Query: 82 AAEKTKVAMAVGSQR--------------------VMFSDHNAIKSF-ELRQYAPHTVLI 120 A M + S + + D +K E + A + ++ Sbjct: 98 GAASMNTLMVLSSWSHHSLKQVAEAAPRGVRWFYMLFYRDRGRMKRLLERAERAGYAAIV 157 Query: 121 SNLGAVQLNYDFGVQKAHQAVHV-LGADGLFLHLNPLQEIIQPNGNTNFADLSSK----- 174 L A Q + F +K + + ++L NP P G+ A+ K Sbjct: 158 --LTADQPFFTFSFRKVATTLPLDFRFPNIYLDDNP----PGPLGSLELAEYFKKTVKEA 211 Query: 175 -----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + +P++LK + LS D ++ ++ GI ++ GG + + D Sbjct: 212 ATWEDVEWVKKNTRLPVVLKGI---LSVDDAKMAVRLGIDAILVSNHGGRQLDGVPATID 268 Query: 230 LESDI-GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + DI G V EA+ GG+R G D+LK++ LGA + Sbjct: 269 VLPDIVGAV------------------GGEAEVYLDGGVRTGTDVLKALALGARCVFIGR 310 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L A + ++ V ++ L+ E ++M G ++ + + +L+ HQ Sbjct: 311 PALWGLAYNGAEGVQQVLKILKDELSLAMARAGCAKIPD--IQRSLVVHQ 358 >gi|302893142|ref|XP_003045452.1| hypothetical protein NECHADRAFT_39199 [Nectria haematococca mpVI 77-13-4] gi|256726378|gb|EEU39739.1| hypothetical protein NECHADRAFT_39199 [Nectria haematococca mpVI 77-13-4] Length = 377 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 19/151 (12%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L+S D+P+++K + S D +L ++ + I+ GG + S Sbjct: 231 LASLTDLPVVVKGIN---SVQDTKLAVEHKVPAIIISNHGGRQVDGVSS----------- 276 Query: 238 FQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 I T L + P + + A GG+R G D++K + LG GL F+ + Sbjct: 277 ----AIETALEIHNEAPEVFKQTEVWADGGVRYGTDVIKLLALGVKAIGLGRSFMYSNVY 332 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ V AI+ L+ E + LG ++++ Sbjct: 333 GAEGVERAIDILKYEIAIDAANLGISDLKKI 363 >gi|157963044|ref|YP_001503078.1| ferredoxin-dependent glutamate synthase [Shewanella pealeana ATCC 700345] gi|157848044|gb|ABV88543.1| ferredoxin-dependent glutamate synthase [Shewanella pealeana ATCC 700345] Length = 514 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 334 DIQFALDASADYIILDGRGGGTGAAPEIFRDHIS----------VPTIPALARARRYLDQ 383 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 IA+GG+R +D +K++ LGA Sbjct: 384 KGESGRVTLIATGGIRTPIDFVKAMALGA 412 >gi|330809029|ref|YP_004353491.1| glutamate synthase, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377137|gb|AEA68487.1| putative glutamate synthase, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 446 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA L D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|327352621|gb|EGE81478.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 511 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R +C E + GG++ G D++K++ LGA G+ +P Sbjct: 387 DTAPPAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGIGRAPLFGLG 446 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG +V++L ++N + Q Sbjct: 447 AGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 492 >gi|319748276|gb|ADV69111.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A transcript variant 4 [Homo sapiens] Length = 933 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|213512490|ref|NP_001134549.1| Hydroxyacid oxidase 2 [Salmo salar] gi|209734194|gb|ACI67966.1| Hydroxyacid oxidase 2 [Salmo salar] Length = 358 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 23/187 (12%) Query: 147 DGLFLHLN-PLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 DG+F P E NT +S K + L S +P+++K + L+ D EL + Sbjct: 185 DGVFQEATGPAGEEYGVPANTLDPSISWKDVYWLQSLTRLPIIIKGI---LTKEDAELAV 241 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G++ ++ GG + D S+I Q + Sbjct: 242 EHGVQGIIVSNHGGRQLDGGPATIDALSEIVDTVQ-----------------GRIEVYLD 284 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + P + A + + + L EF +SM L G + Sbjct: 285 GGVRTGSDVLKAVALGAKCVFIGRPAVWGLAYKGEEGLKEVLHILNDEFRLSMALSGCRN 344 Query: 324 VQELYLN 330 V E+ N Sbjct: 345 VAEINRN 351 >gi|329664108|ref|NP_001192351.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Bos taurus] gi|297471584|ref|XP_002685310.1| PREDICTED: phosphodiesterase 11A [Bos taurus] gi|296490725|gb|DAA32838.1| phosphodiesterase 11A [Bos taurus] Length = 926 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 729 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 780 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 781 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 818 >gi|299532051|ref|ZP_07045446.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] gi|298719966|gb|EFI60928.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] Length = 413 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 36/157 (22%) Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRD------------------LESDIG---IVFQDWG 242 L SG D +GR +W IE R + +DIG IV + G Sbjct: 250 LLSGTAIRDTSGRDHLNWKNIERIRQRWKGNLIIKGILNEDDAVMATDIGAQGIVVSNHG 309 Query: 243 ------IPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + PL + PY + + G+R G D+LK++ LGA + L PF+ Sbjct: 310 GRQLDGVVAPLQML---PYVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVFLGRPFM 366 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V AI LR E +M +LG + E+ Sbjct: 367 YAAAVGGAQGVHHAITLLRDEVDRNMAMLGATSMAEI 403 >gi|239613615|gb|EEQ90602.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis ER-3] Length = 495 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R +C E + GG++ G D++K++ LGA G+ +P Sbjct: 371 DTAPPAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGIGRAPLFGLG 430 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG +V++L ++N + Q Sbjct: 431 AGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 476 >gi|238023660|ref|YP_002907892.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] gi|237878325|gb|ACR30657.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] Length = 372 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L+ +P+LLK V L+ D++ L +G ++ GG + + + LE+ Sbjct: 231 IAWLAERSVLPILLKGV---LNPADVQQALSAGAAGLIVSNHGGRTLDTLPAA--LEALP 285 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 G+ A + GG+R G D++K++ LGAS + P + Sbjct: 286 GV---------------ASAVAGRVPVLLDGGIRRGTDVVKALALGASAVLIGQPVVHAL 330 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ V + L+ EF +M L+G R++++ Sbjct: 331 AVGGMRGVAHMLTILQTEFEAAMALVGRARIRDI 364 >gi|119631453|gb|EAX11048.1| phosphodiesterase 11A, isoform CRA_b [Homo sapiens] Length = 934 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|116536085|ref|NP_058649.3| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 4 [Homo sapiens] gi|296439264|sp|Q9HCR9|PDE11_HUMAN RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; AltName: Full=cAMP and cGMP phosphodiesterase 11A Length = 933 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|319748274|gb|ADV69110.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A transcript variant 4 [Homo sapiens] Length = 933 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|254465906|ref|ZP_05079317.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] gi|206686814|gb|EDZ47296.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] Length = 388 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGA--SLGGLASPFLKPAMDSSDAVVAAIES 307 E+ N+ + G+R+G D+LK++ LGA ++ G A + AM V AA+E Sbjct: 293 EIVDAVGNDVEVHLDSGIRSGQDVLKALALGAKGTMIGRAFVYGLGAM-GQKGVTAALEV 351 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALI 334 +RKE +M L G + V+ L + LI Sbjct: 352 IRKELDTTMALCGERSVEGLGRHNLLI 378 >gi|10716052|dbj|BAB16371.1| phosphodiesterase 11A [Homo sapiens] gi|15128482|dbj|BAB62712.1| phosphodiesterase 11A4 [Homo sapiens] gi|109730637|gb|AAI12394.1| Phosphodiesterase 11A [Homo sapiens] gi|109731622|gb|AAI14432.1| Phosphodiesterase 11A [Homo sapiens] Length = 934 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|332814827|ref|XP_001154733.2| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2 [Pan troglodytes] Length = 933 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|261192982|ref|XP_002622897.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239589032|gb|EEQ71675.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis SLH14081] Length = 495 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R +C E + GG++ G D++K++ LGA G+ +P Sbjct: 371 DTAPPAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGIGRAPLFGLG 430 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG +V++L ++N + Q Sbjct: 431 AGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 476 >gi|119631455|gb|EAX11050.1| phosphodiesterase 11A, isoform CRA_d [Homo sapiens] Length = 934 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|15678133|ref|NP_275248.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621136|gb|AAB84604.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 622 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 19/124 (15%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 T DL+ I LL D VP+++K +G G D+++ ++G + G G + + Sbjct: 411 TREGDLAKHIELLREVTDWRVPIVVK-LGPGRVYEDVQIAAEAGADVISVDGMEGGTGAA 469 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILKSI 277 E +V + G+PT +L A N E I +GG+R+G D+ K++ Sbjct: 470 PE----------VVIEHTGVPTLAALVQAVNGLNDIGLKDEVDLIITGGIRSGADVAKAM 519 Query: 278 ILGA 281 +GA Sbjct: 520 AMGA 523 >gi|168002982|ref|XP_001754192.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694746|gb|EDQ81093.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGAS + P + A D V ++ LR EF ++M L G + Sbjct: 289 GGVRRGTDVLKALALGASGVFVGRPVVFGLATDGQKGVEKVLQMLRDEFELAMALAGCTK 348 Query: 324 VQEL 327 V ++ Sbjct: 349 VSDI 352 >gi|302666314|ref|XP_003024758.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] gi|291188827|gb|EFE44147.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] Length = 508 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 384 DTAPPSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFSLA 443 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 444 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 489 >gi|46109860|ref|XP_381988.1| hypothetical protein FG01812.1 [Gibberella zeae PH-1] Length = 500 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 27/56 (48%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG G DILK+I LGA+ G+ PFL + D L+ E SM L G Sbjct: 412 GGFERGSDILKAICLGATAVGIGRPFLYSLIHGQDGAEHLCHILKDELETSMRLCG 467 >gi|46115734|ref|XP_383885.1| hypothetical protein FG03709.1 [Gibberella zeae PH-1] Length = 431 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA G+ PFL A V AI + E +M LLG Sbjct: 353 GGIRRGSDILKALCLGARGVGIGRPFLYAMAGYGQKGVEKAIRIYKDELERNMRLLGCTS 412 Query: 324 VQELY 328 + +L+ Sbjct: 413 MDQLH 417 >gi|302510741|ref|XP_003017322.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] gi|291180893|gb|EFE36677.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] Length = 508 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 384 DTAPPSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFSLA 443 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 444 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 489 >gi|297180307|gb|ADI16525.1| l-lactate dehydrogenase (fMn-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured bacterium HF4000_009C18] Length = 386 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + I GG+R G +LK++ LGA +L A+ +E ++ E Sbjct: 303 DKIEIILDGGVRRGTHVLKALALGAKACSFGKAYLYALGAGGQKAIEIVLEKMKSEIKRD 362 Query: 316 MFLLGTKRVQELYLNTALIRHQ 337 M L+G K V+EL + R + Sbjct: 363 MILMGCKSVKELNRSKVAFRKK 384 >gi|169606690|ref|XP_001796765.1| hypothetical protein SNOG_06393 [Phaeosphaeria nodorum SN15] gi|111065104|gb|EAT86224.1| hypothetical protein SNOG_06393 [Phaeosphaeria nodorum SN15] Length = 386 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 245 TPLSLEMARPYCNE-------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 P +LE+A NE + A GG+R GVD LK + LG GL PF+ + Sbjct: 282 APSALEIALEIYNEDPEIFKKVEVYADGGVRYGVDALKLLALGVRAVGLGRPFMYANVYG 341 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ V A++ ++ E LG ++ + Sbjct: 342 AEGVARAVKMMKYELTNDAANLGVGNLKTI 371 >gi|149730759|ref|XP_001500671.1| PREDICTED: phosphodiesterase 11A [Equus caballus] Length = 933 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|109100215|ref|XP_001097592.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2 [Macaca mulatta] Length = 933 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I++HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKNHRDVFRSMLMTACDLGAVTKPWEI 826 >gi|262204602|ref|YP_003275810.1| ferredoxin-dependent glutamate synthase [Gordonia bronchialis DSM 43247] gi|262087949|gb|ACY23917.1| ferredoxin-dependent glutamate synthase [Gordonia bronchialis DSM 43247] Length = 447 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 25/156 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG + D++L + SG + G +GGT+ + Sbjct: 208 TGPDDLAIKINELREITDWEKPIYVK-VGATRTYYDVKLAVHSGADVVVVDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMA----------RPYCNEAQFIASGGLRNGVD 272 + + + GIPT ++ A R + Q I SGG+RNG D Sbjct: 267 Q-----------EVFIEHVGIPTLAAIPQAVQALAELGVHRAGKDGVQLIVSGGIRNGAD 315 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ A E+L Sbjct: 316 VAKAMALGADAVAIGTAALIALGDNDPRYAAEYEAL 351 >gi|302698461|ref|XP_003038909.1| hypothetical protein SCHCODRAFT_73694 [Schizophyllum commune H4-8] gi|300112606|gb|EFJ04007.1| hypothetical protein SCHCODRAFT_73694 [Schizophyllum commune H4-8] Length = 482 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 28/159 (17%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+++K + C D L +++G+ ++ GG R L Sbjct: 329 IPWLRSVTRLPVVVKGIQC---VEDALLAVEAGVDGILLSNHGG---------RQL---- 372 Query: 235 GIVFQDWGIPTPLS----LEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 D+ +P PL L P ++ + GG+R G D++K++ LG + GL P Sbjct: 373 -----DYALP-PLEVLYRLRTRHPEVFSKVEVYLDGGVRRGTDVIKAVCLGTTAVGLGRP 426 Query: 290 FL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL + + V I L E + +M L+G ++ L Sbjct: 427 FLYAQSAYGAAGVKRIIHILESEIVTAMRLMGVSSLKGL 465 >gi|254410250|ref|ZP_05024030.1| FMN-dependent dehydrogenase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183286|gb|EDX78270.1| FMN-dependent dehydrogenase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 368 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 E+ ++ + GG+R G D+LK++ LGA + P L A+ V +E L Sbjct: 281 EVVTAVGDQVDVLMDGGIRRGTDVLKALALGAKAVLVGRPVLWGLAVAGEAGVQHVLELL 340 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E V+M L G +VQ++ Sbjct: 341 RDELDVAMALSGCAKVQDI 359 >gi|212723378|ref|NP_001131364.1| hypothetical protein LOC100192687 [Zea mays] gi|194691324|gb|ACF79746.1| unknown [Zea mays] Length = 221 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Query: 243 IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 +P +S E+AR GG+R G D+ K++ LGAS + P L A+D Sbjct: 117 VPATISCLEEVAREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEA 176 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ LR E ++M L G ++E+ Sbjct: 177 GVRKVLQMLRDELELTMALSGCTSLREI 204 >gi|296420707|ref|XP_002839910.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636117|emb|CAZ84101.1| unnamed protein product [Tuber melanosporum] Length = 524 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 244 PTPLSLEMA-RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDS 297 P P+ + M R Y E + GG+R G D++K++ LGA G+ P L + Sbjct: 405 PPPVYVLMEIRKYAPEVFDKLEVYVDGGIRRGTDVVKALCLGAKAVGIGRPALFGLSGYG 464 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNT 331 D V + LR+E +M LLG V EL ++NT Sbjct: 465 VDGVRRVLAILREEIETTMRLLGVYSVGELGSRHINT 501 >gi|239906762|ref|YP_002953503.1| FMN-dependent dehydrogenase domain protein [Desulfovibrio magneticus RS-1] gi|239796628|dbj|BAH75617.1| FMN-dependent dehydrogenase domain protein [Desulfovibrio magneticus RS-1] Length = 390 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Query: 245 TPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 TP + E +AR + +A GG+R G D+LK + LGA + P + A ++ Sbjct: 294 TPGAAEVLPAIARAVKGKGVILADGGVRTGADVLKYLALGADAVLVGRPLVIGAFGGGAE 353 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + +R E +M L GT V+E+ Sbjct: 354 GVALLLGKMRAELAAAMLLTGTASVREV 381 >gi|332591483|emb|CBL95266.1| glycerate oxidase [Pinus pinaster] Length = 364 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+L+K + L++ D EL +++G ++ G I H+ L Sbjct: 215 IKWLQSLTSLPILIKGI---LTAEDAELAIQAGFAGIIVSNHGARQL--ILCHQRL---- 265 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 W I E+ + + GG+R G D+ K++ +GA + P + Sbjct: 266 ------WLIE-----EVTKAVRGRVPVLFDGGIRRGTDVFKALAIGAQAVLVGRPIIYGL 314 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ V +E L+ E ++M L G RV+E+ Sbjct: 315 AVKGESGVKKVLEMLQDELELAMSLSGCCRVEEI 348 >gi|298290692|ref|YP_003692631.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] gi|296927203|gb|ADH88012.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] Length = 379 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKR 323 GG+++G D+LK++ LGA + FL A VA AI+ +RKE VSM L G K Sbjct: 309 GGVQSGQDVLKAVALGAKGCLMGKAFLWSLAAGGQAGVAKAIDIIRKELDVSMALTGVKD 368 Query: 324 VQEL 327 + ++ Sbjct: 369 ITQV 372 >gi|297800234|ref|XP_002868001.1| hypothetical protein ARALYDRAFT_914854 [Arabidopsis lyrata subsp. lyrata] gi|297313837|gb|EFH44260.1| hypothetical protein ARALYDRAFT_914854 [Arabidopsis lyrata subsp. lyrata] Length = 368 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P L A D V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGVFVGRPSLFSLAADGEAGVRKMLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 ++E+ N Sbjct: 346 LREISRN 352 >gi|156035785|ref|XP_001586004.1| hypothetical protein SS1G_13096 [Sclerotinia sclerotiorum 1980] gi|154698501|gb|EDN98239.1| hypothetical protein SS1G_13096 [Sclerotinia sclerotiorum 1980 UF-70] Length = 515 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 20/162 (12%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P+LLK V D+ ++ G++ ++ GG S ++ +++ Sbjct: 336 IPWFQSITKMPILLKGVQ---RVEDVIRAVECGVQGVVLSNHGGRQLDFARSGIEVLAEV 392 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 V ++ R + + + GG+R DI+K++ LGA G+ PFL A Sbjct: 393 MPVLRE------------RGWEDRIEIYIDGGIRRSTDIIKALCLGAKGVGIGRPFLY-A 439 Query: 295 MDSSD--AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 M + V A++ L+ E ++M L+G V + LN LI Sbjct: 440 MSAYGLAGVDRAMQLLKDEMEMNMRLIGCSSVDQ--LNPTLI 479 >gi|169599446|ref|XP_001793146.1| hypothetical protein SNOG_02544 [Phaeosphaeria nodorum SN15] gi|111069636|gb|EAT90756.1| hypothetical protein SNOG_02544 [Phaeosphaeria nodorum SN15] Length = 502 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 320 IPWFKSITKMPIILKGVQC---VEDVIRAVEVGVDGVVLSNHGGRQLDFARSGIEVLAEV 376 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + R + + + GG+R DI+K++ LGA G+ PFL A Sbjct: 377 MPILRQ------------RGWQDRIEVYIDGGVRRATDIIKAVALGAKGVGIGRPFLY-A 423 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + V A++ L+ E ++M L+G V +L Sbjct: 424 MSAYGLPGVDRAMQLLKDEMEMNMRLIGASSVADL 458 >gi|296419533|ref|XP_002839357.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635496|emb|CAZ83548.1| unnamed protein product [Tuber melanosporum] Length = 481 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 19/143 (13%) Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S A +P++LK + ++ D L + G++ ++ GG R+L++ ++ Sbjct: 319 SVAGGLPIVLKGI---QTAADARLAAEYGVQGIVLSNHGG---------RNLDTSPPALY 366 Query: 239 QDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 T L + P N + GG+R G DI K++ LGA+ G+ P+L Sbjct: 367 ------TLLEIHKVCPEIFNSLEVYIDGGIRRGTDIFKALCLGATAVGVGRPYLYALNYG 420 Query: 298 SDAVVAAIESLRKEFIVSMFLLG 320 ++ V + L+ E +M + G Sbjct: 421 AEGVAHLTQILKDELETTMRMCG 443 >gi|1773330|gb|AAB40396.1| glycolate oxidase [Mesembryanthemum crystallinum] Length = 370 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ +R EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMMRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 +QE+ N Sbjct: 346 IQEISRN 352 >gi|170679931|ref|YP_001745907.1| L-lactate dehydrogenase [Escherichia coli SMS-3-5] gi|259494982|sp|B1LK44|LLDD_ECOSM RecName: Full=L-lactate dehydrogenase [cytochrome] gi|170517649|gb|ACB15827.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli SMS-3-5] Length = 396 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|326483332|gb|EGE07342.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 383 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 259 DTAPPSIHTLMEIRKYCPEVFNRIEVWIDGGVKRGTDVVKALCLGAKGVGVGRNALFSLA 318 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 319 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 364 >gi|46108290|ref|XP_381203.1| hypothetical protein FG01027.1 [Gibberella zeae PH-1] Length = 488 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 253 RPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R YC E Q GG++ G D++K++ LGAS G+ + V +E Sbjct: 377 RKYCPEIMSKVQIWIDGGIKRGTDVVKALCLGASGVGIGRAALFGLGAGGQAGVERTLEI 436 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L E M LLG K + EL Sbjct: 437 LEAETATCMRLLGAKNISEL 456 >gi|323650489|gb|ADX97325.1| glycolate oxidase [Mangifera indica] Length = 370 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A D + A++ LR EF ++M L G + Sbjct: 287 GGVRRGTDVFKALALGASGIFIGRPVVFSLAADGEAGIRKALQMLRDEFELTMALSGCRS 346 Query: 324 VQEL 327 ++E+ Sbjct: 347 LKEI 350 >gi|300939206|ref|ZP_07153887.1| L-lactate dehydrogenase [Escherichia coli MS 21-1] gi|300455887|gb|EFK19380.1| L-lactate dehydrogenase [Escherichia coli MS 21-1] Length = 396 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|330946434|ref|XP_003306771.1| hypothetical protein PTT_19987 [Pyrenophora teres f. teres 0-1] gi|311315590|gb|EFQ85126.1| hypothetical protein PTT_19987 [Pyrenophora teres f. teres 0-1] Length = 470 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 247 LSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++L R YC E + GGLR+G D+LK++ LGA+ G+ PFL Sbjct: 389 MTLLEIRTYCPEVLGKLEVFLDGGLRDGNDVLKALCLGATAVGVGRPFL 437 >gi|193066082|ref|ZP_03047138.1| L-lactate dehydrogenase [Escherichia coli E22] gi|194427441|ref|ZP_03059990.1| L-lactate dehydrogenase [Escherichia coli B171] gi|260846627|ref|YP_003224405.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O103:H2 str. 12009] gi|192926244|gb|EDV80882.1| L-lactate dehydrogenase [Escherichia coli E22] gi|194414481|gb|EDX30754.1| L-lactate dehydrogenase [Escherichia coli B171] gi|257761774|dbj|BAI33271.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O103:H2 str. 12009] gi|323160716|gb|EFZ46653.1| L-lactate dehydrogenase [Escherichia coli E128010] Length = 396 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSINEI 370 >gi|160901229|ref|YP_001566811.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160366813|gb|ABX38426.1| L-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] Length = 415 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA + PF A + A V A+ LR+E + M +LG R+ Sbjct: 339 GVRRGTDVLKALALGARCVFVGRPFNYAASVAGPAGVTHAMALLREEVLRDMAMLGATRL 398 Query: 325 QELYLNTALIRH 336 + + A +RH Sbjct: 399 DQ--VTPACVRH 408 >gi|315044949|ref|XP_003171850.1| hypothetical protein MGYG_06395 [Arthroderma gypseum CBS 118893] gi|311344193|gb|EFR03396.1| hypothetical protein MGYG_06395 [Arthroderma gypseum CBS 118893] Length = 494 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 370 DTAPPSVHTLMEIRKYCPEVFNRLEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFSLA 429 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 430 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 475 >gi|311272709|ref|XP_003133556.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Sus scrofa] Length = 320 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 111 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 162 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ +++HRD+ D+G V + W I Sbjct: 163 ELVSKGEYDWN-VKNHRDIFRSMLMTACDLGAVTKPWEI 200 >gi|170749811|ref|YP_001756071.1| L-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] gi|170656333|gb|ACB25388.1| L-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] Length = 435 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFL 318 + I G+R G D++K++ LGA L PF+ A+ V A+ L++E M L Sbjct: 355 KIIVDSGVRRGTDVMKALALGADFVLLGRPFMFAAALGGVPGVEHAMRILKEELNRDMAL 414 Query: 319 LGTKRVQEL 327 +G R+ EL Sbjct: 415 IGVNRLSEL 423 >gi|160880389|ref|YP_001559357.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] gi|160429055|gb|ABX42618.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] Length = 343 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 E+A+ + + GG+R+G D+ KS+ LGA +A PF+ + V + I+ + Sbjct: 257 EIAKEFKGKMTIFVDGGIRSGADLFKSLALGADAAIIARPFVTAVFGGGYEGVRSYIQKI 316 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E I M + G + E+ Sbjct: 317 GAELIDVMEMCGVSSLDEI 335 >gi|331685270|ref|ZP_08385856.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H299] gi|331077641|gb|EGI48853.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H299] Length = 396 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|189208145|ref|XP_001940406.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976499|gb|EDU43125.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 401 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G DI K++ LGA + P L A + V A+ L EF + M L G R Sbjct: 321 GGIRHGTDIFKALALGADFVWVGRPVLWGLAYKGQEGVELALRLLADEFRLCMGLAGVTR 380 Query: 324 VQEL 327 V+++ Sbjct: 381 VEDI 384 >gi|171692325|ref|XP_001911087.1| hypothetical protein [Podospora anserina S mat+] gi|170946111|emb|CAP72912.1| unnamed protein product [Podospora anserina S mat+] Length = 460 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 19/132 (14%) Query: 215 GRGGTSWSRIESH--RDLESDIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLR 268 GRG I +H R LE+ G + + LE+ R C + + + GG+R Sbjct: 317 GRGWWMGLSISNHGGRSLETATGTIL--------VLLELQR-CCPGVFDRMEVLIDGGVR 367 Query: 269 NGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D+ K++ LGA G +P + + V +E L E + +M + G ++EL Sbjct: 368 RGTDVFKALCLGARGVGFGRAPLWALGLYGREGVERYLEILNDELVTTMKMCGVTSLEEL 427 Query: 328 Y---LNTALIRH 336 + +NT + H Sbjct: 428 HPGLVNTRAVDH 439 >gi|256021388|ref|ZP_05435253.1| L-lactate dehydrogenase [Shigella sp. D9] gi|332282623|ref|ZP_08395036.1| L-lactate dehydrogenase [Shigella sp. D9] gi|332104975|gb|EGJ08321.1| L-lactate dehydrogenase [Shigella sp. D9] Length = 396 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSINEI 370 >gi|120406455|ref|YP_956284.1| ferredoxin-dependent glutamate synthase [Mycobacterium vanbaalenii PYR-1] gi|119959273|gb|ABM16278.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium vanbaalenii PYR-1] Length = 447 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 21/152 (13%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG + D++L + +G + G +GGT+ + Sbjct: 209 TGPDDLTIKINELREITDWEKPIYVK-VGASRTYYDVKLAVHAGADVVVVDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + LGA + + L D+ A E L Sbjct: 317 LALGADAVAIGTAALIALGDNHPRYAAEYEKL 348 >gi|331665233|ref|ZP_08366134.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA143] gi|331675090|ref|ZP_08375847.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA280] gi|331057743|gb|EGI29729.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA143] gi|331067999|gb|EGI39397.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA280] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|466743|gb|AAB18582.1| lctD [Escherichia coli str. K-12 substr. MG1655] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|327295673|ref|XP_003232531.1| mitochondrial cytochrome b2 [Trichophyton rubrum CBS 118892] gi|326464842|gb|EGD90295.1| mitochondrial cytochrome b2 [Trichophyton rubrum CBS 118892] Length = 493 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 369 DTAPPSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFSLA 428 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 429 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 474 >gi|91213119|ref|YP_543105.1| L-lactate dehydrogenase [Escherichia coli UTI89] gi|218560680|ref|YP_002393593.1| L-lactate dehydrogenase [Escherichia coli S88] gi|237703376|ref|ZP_04533857.1| L-lactate dehydrogenase [Escherichia sp. 3_2_53FAA] gi|122421915|sp|Q1R4Z0|LLDD_ECOUT RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494971|sp|B7MFG9|LLDD_ECO45 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|91074693|gb|ABE09574.1| L-lactate dehydrogenase [Escherichia coli UTI89] gi|218367449|emb|CAR05231.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli S88] gi|226902640|gb|EEH88899.1| L-lactate dehydrogenase [Escherichia sp. 3_2_53FAA] gi|307628682|gb|ADN72986.1| L-lactate dehydrogenase [Escherichia coli UM146] gi|315285361|gb|EFU44806.1| L-lactate dehydrogenase [Escherichia coli MS 110-3] gi|323949847|gb|EGB45731.1| FMN-dependent dehydrogenase [Escherichia coli H252] gi|323954852|gb|EGB50632.1| FMN-dependent dehydrogenase [Escherichia coli H263] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|82545972|ref|YP_409919.1| L-lactate dehydrogenase [Shigella boydii Sb227] gi|85540707|sp|Q31V17|LLDD_SHIBS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81247383|gb|ABB68091.1| L-lactate dehydrogenase [Shigella boydii Sb227] gi|320186851|gb|EFW61571.1| L-lactate dehydrogenase [Shigella flexneri CDC 796-83] gi|332089524|gb|EGI94628.1| L-lactate dehydrogenase [Shigella boydii 3594-74] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|82779098|ref|YP_405447.1| L-lactate dehydrogenase [Shigella dysenteriae Sd197] gi|309784415|ref|ZP_07679054.1| L-lactate dehydrogenase [Shigella dysenteriae 1617] gi|85540708|sp|Q329P9|LLDD_SHIDS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81243246|gb|ABB63956.1| L-lactate dehydrogenase [Shigella dysenteriae Sd197] gi|308927922|gb|EFP73390.1| L-lactate dehydrogenase [Shigella dysenteriae 1617] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSINEI 370 >gi|15804149|ref|NP_290188.1| L-lactate dehydrogenase [Escherichia coli O157:H7 EDL933] gi|15833737|ref|NP_312510.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|24114874|ref|NP_709384.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 301] gi|30065119|ref|NP_839290.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|74314158|ref|YP_312577.1| L-lactate dehydrogenase [Shigella sonnei Ss046] gi|110807719|ref|YP_691239.1| L-lactate dehydrogenase [Shigella flexneri 5 str. 8401] gi|157159353|ref|YP_001465088.1| L-lactate dehydrogenase [Escherichia coli E24377A] gi|168746845|ref|ZP_02771867.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4113] gi|168753428|ref|ZP_02778435.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4401] gi|168759702|ref|ZP_02784709.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4501] gi|168766024|ref|ZP_02791031.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4486] gi|168772429|ref|ZP_02797436.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O157:H7 str. EC4196] gi|168779760|ref|ZP_02804767.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4076] gi|168785482|ref|ZP_02810489.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC869] gi|168797448|ref|ZP_02822455.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC508] gi|191168147|ref|ZP_03029944.1| L-lactate dehydrogenase [Escherichia coli B7A] gi|193068484|ref|ZP_03049446.1| L-lactate dehydrogenase [Escherichia coli E110019] gi|195935134|ref|ZP_03080516.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4024] gi|208806796|ref|ZP_03249133.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4206] gi|208812631|ref|ZP_03253960.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4045] gi|208819289|ref|ZP_03259609.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4042] gi|209396531|ref|YP_002273087.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4115] gi|209921078|ref|YP_002295162.1| L-lactate dehydrogenase [Escherichia coli SE11] gi|217325104|ref|ZP_03441188.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14588] gi|218556170|ref|YP_002389083.1| L-lactate dehydrogenase [Escherichia coli IAI1] gi|218697329|ref|YP_002404996.1| L-lactate dehydrogenase [Escherichia coli 55989] gi|254795563|ref|YP_003080400.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14359] gi|260857997|ref|YP_003231888.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O26:H11 str. 11368] gi|260870338|ref|YP_003236740.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O111:H- str. 11128] gi|261224210|ref|ZP_05938491.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli O157:H7 str. FRIK2000] gi|261254821|ref|ZP_05947354.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O157:H7 str. FRIK966] gi|291284979|ref|YP_003501797.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O55:H7 str. CB9615] gi|300815155|ref|ZP_07095380.1| L-lactate dehydrogenase [Escherichia coli MS 107-1] gi|300923392|ref|ZP_07139433.1| L-lactate dehydrogenase [Escherichia coli MS 182-1] gi|301325290|ref|ZP_07218797.1| L-lactate dehydrogenase [Escherichia coli MS 78-1] gi|307315234|ref|ZP_07594812.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli W] gi|309797476|ref|ZP_07691867.1| L-lactate dehydrogenase [Escherichia coli MS 145-7] gi|81839373|sp|Q83PP7|LLDD_SHIFL RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81849041|sp|Q8XDF7|LLDD_ECO57 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|85540709|sp|Q3YVX0|LLDD_SHISS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|123342256|sp|Q0SYD1|LLDD_SHIF8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990700|sp|A7ZTF9|LLDD_ECO24 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494972|sp|B7L725|LLDD_ECO55 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494973|sp|B5YWA7|LLDD_ECO5E RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494976|sp|B7M492|LLDD_ECO8A RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494981|sp|B6I3I4|LLDD_ECOSE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|12518355|gb|AAG58752.1|AE005588_3 L-lactate dehydrogenase [Escherichia coli O157:H7 str. EDL933] gi|13363958|dbj|BAB37906.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|24054112|gb|AAN45091.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 301] gi|30043380|gb|AAP19101.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|73857635|gb|AAZ90342.1| L-lactate dehydrogenase [Shigella sonnei Ss046] gi|110617267|gb|ABF05934.1| L-lactate dehydrogenase [Shigella flexneri 5 str. 8401] gi|157081383|gb|ABV21091.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli E24377A] gi|187771658|gb|EDU35502.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O157:H7 str. EC4196] gi|188018474|gb|EDU56596.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4113] gi|189002661|gb|EDU71647.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4076] gi|189359194|gb|EDU77613.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4401] gi|189364369|gb|EDU82788.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4486] gi|189369483|gb|EDU87899.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4501] gi|189374302|gb|EDU92718.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC869] gi|189379973|gb|EDU98389.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC508] gi|190901816|gb|EDV61568.1| L-lactate dehydrogenase [Escherichia coli B7A] gi|192958135|gb|EDV88576.1| L-lactate dehydrogenase [Escherichia coli E110019] gi|208726597|gb|EDZ76198.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4206] gi|208733908|gb|EDZ82595.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4045] gi|208739412|gb|EDZ87094.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4042] gi|209157931|gb|ACI35364.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4115] gi|209754878|gb|ACI75751.1| L-lactate dehydrogenase [Escherichia coli] gi|209754880|gb|ACI75752.1| L-lactate dehydrogenase [Escherichia coli] gi|209754882|gb|ACI75753.1| L-lactate dehydrogenase [Escherichia coli] gi|209754886|gb|ACI75755.1| L-lactate dehydrogenase [Escherichia coli] gi|209914337|dbj|BAG79411.1| L-lactate dehydrogenase [Escherichia coli SE11] gi|217321325|gb|EEC29749.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14588] gi|218354061|emb|CAV00591.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli 55989] gi|218362938|emb|CAR00575.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli IAI1] gi|254594963|gb|ACT74324.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli O157:H7 str. TW14359] gi|257756646|dbj|BAI28148.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O26:H11 str. 11368] gi|257766694|dbj|BAI38189.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O111:H- str. 11128] gi|281602967|gb|ADA75951.1| L-lactate dehydrogenase [Shigella flexneri 2002017] gi|290764852|gb|ADD58813.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O55:H7 str. CB9615] gi|300420302|gb|EFK03613.1| L-lactate dehydrogenase [Escherichia coli MS 182-1] gi|300532047|gb|EFK53109.1| L-lactate dehydrogenase [Escherichia coli MS 107-1] gi|300847817|gb|EFK75577.1| L-lactate dehydrogenase [Escherichia coli MS 78-1] gi|306905366|gb|EFN35904.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli W] gi|308118912|gb|EFO56174.1| L-lactate dehydrogenase [Escherichia coli MS 145-7] gi|313647522|gb|EFS11972.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|315062896|gb|ADT77223.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli W] gi|320191339|gb|EFW65989.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC1212] gi|320639514|gb|EFX09122.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. G5101] gi|320644953|gb|EFX13983.1| L-lactate dehydrogenase [Escherichia coli O157:H- str. 493-89] gi|320650220|gb|EFX18709.1| L-lactate dehydrogenase [Escherichia coli O157:H- str. H 2687] gi|320655572|gb|EFX23500.1| L-lactate dehydrogenase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661306|gb|EFX28730.1| L-lactate dehydrogenase [Escherichia coli O55:H7 str. USDA 5905] gi|320666320|gb|EFX33319.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. LSU-61] gi|323166911|gb|EFZ52650.1| L-lactate dehydrogenase [Shigella sonnei 53G] gi|323173198|gb|EFZ58827.1| L-lactate dehydrogenase [Escherichia coli LT-68] gi|323179423|gb|EFZ64990.1| L-lactate dehydrogenase [Escherichia coli 1180] gi|323182636|gb|EFZ68039.1| L-lactate dehydrogenase [Escherichia coli 1357] gi|323376511|gb|ADX48779.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli KO11] gi|324019717|gb|EGB88936.1| L-lactate dehydrogenase [Escherichia coli MS 117-3] gi|324116053|gb|EGC09979.1| FMN-dependent dehydrogenase [Escherichia coli E1167] gi|326337391|gb|EGD61226.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. 1044] gi|326339916|gb|EGD63723.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. 1125] gi|332749943|gb|EGJ80355.1| L-lactate dehydrogenase [Shigella flexneri K-671] gi|332751134|gb|EGJ81537.1| L-lactate dehydrogenase [Shigella flexneri 2747-71] gi|332764195|gb|EGJ94432.1| L-lactate dehydrogenase [Shigella flexneri 2930-71] gi|332996169|gb|EGK15796.1| L-lactate dehydrogenase [Shigella flexneri VA-6] gi|333012835|gb|EGK32212.1| L-lactate dehydrogenase [Shigella flexneri K-304] gi|333013349|gb|EGK32721.1| L-lactate dehydrogenase [Shigella flexneri K-227] Length = 396 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|321468881|gb|EFX79864.1| hypothetical protein DAPPUDRAFT_304364 [Daphnia pulex] Length = 370 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 23/164 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P++LK + L D EL ++ G+ ++ GG +++ D Sbjct: 223 IDWLKSITKLPIVLKGI---LRPDDAELAVQHGVSAIGVSNHGGRQLDGVQATID----- 274 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 P ++ C + GG+ G D+LK++ LGA + P L Sbjct: 275 ---------ALPAIVKQVNGRC---EVFLDGGVTRGTDVLKALALGAKMTFFGRPTLWGL 322 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A V I+ L+ E V+M L G V E ++++L+ Q Sbjct: 323 AHSGEQGVKNIIQLLKTEIDVAMALSGCSSVDE--IDSSLVLRQ 364 >gi|320586339|gb|EFW99018.1| L-lactate dehydrogenase [Grosmannia clavigera kw1407] Length = 419 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+ G D++K++ LGAS G+ FL + +D V+ AI L E +M LLG Sbjct: 339 GGVTRGSDVVKALCLGASGVGIGRGFLFALSAYGTDGVIKAISILSDEIQTTMRLLGVND 398 Query: 324 VQEL---YLN 330 + +L YLN Sbjct: 399 ISQLNNNYLN 408 >gi|315297042|gb|EFU56322.1| L-lactate dehydrogenase [Escherichia coli MS 16-3] gi|323189352|gb|EFZ74634.1| L-lactate dehydrogenase [Escherichia coli RN587/1] Length = 396 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|209754884|gb|ACI75754.1| L-lactate dehydrogenase [Escherichia coli] Length = 396 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|26250249|ref|NP_756289.1| L-lactate dehydrogenase [Escherichia coli CFT073] gi|110643849|ref|YP_671579.1| L-lactate dehydrogenase [Escherichia coli 536] gi|191170351|ref|ZP_03031904.1| L-lactate dehydrogenase [Escherichia coli F11] gi|194431001|ref|ZP_03063294.1| L-lactate dehydrogenase [Shigella dysenteriae 1012] gi|218702374|ref|YP_002410003.1| L-lactate dehydrogenase [Escherichia coli IAI39] gi|227883775|ref|ZP_04001580.1| L-lactate dehydrogenase [Escherichia coli 83972] gi|293417070|ref|ZP_06659697.1| lldD [Escherichia coli B185] gi|300983586|ref|ZP_07176678.1| L-lactate dehydrogenase [Escherichia coli MS 200-1] gi|300984992|ref|ZP_07177244.1| L-lactate dehydrogenase [Escherichia coli MS 45-1] gi|301047397|ref|ZP_07194477.1| L-lactate dehydrogenase [Escherichia coli MS 185-1] gi|331649423|ref|ZP_08350509.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M605] gi|331659928|ref|ZP_08360866.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA206] gi|81846542|sp|Q8FCB1|LLDD_ECOL6 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|122957897|sp|Q0TBK1|LLDD_ECOL5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494974|sp|B7NPB4|LLDD_ECO7I RecName: Full=L-lactate dehydrogenase [cytochrome] gi|26110678|gb|AAN82863.1|AE016768_281 L-lactate dehydrogenase [Escherichia coli CFT073] gi|110345441|gb|ABG71678.1| L-lactate dehydrogenase [Escherichia coli 536] gi|190909159|gb|EDV68745.1| L-lactate dehydrogenase [Escherichia coli F11] gi|194420456|gb|EDX36532.1| L-lactate dehydrogenase [Shigella dysenteriae 1012] gi|218372360|emb|CAR20234.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli IAI39] gi|222035316|emb|CAP78061.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli LF82] gi|227839053|gb|EEJ49519.1| L-lactate dehydrogenase [Escherichia coli 83972] gi|281180651|dbj|BAI56981.1| L-lactate dehydrogenase [Escherichia coli SE15] gi|291431101|gb|EFF04094.1| lldD [Escherichia coli B185] gi|300300671|gb|EFJ57056.1| L-lactate dehydrogenase [Escherichia coli MS 185-1] gi|300306910|gb|EFJ61430.1| L-lactate dehydrogenase [Escherichia coli MS 200-1] gi|300408272|gb|EFJ91810.1| L-lactate dehydrogenase [Escherichia coli MS 45-1] gi|307555707|gb|ADN48482.1| L-lactate dehydrogenase [Escherichia coli ABU 83972] gi|312948169|gb|ADR28996.1| L-lactate dehydrogenase [Escherichia coli O83:H1 str. NRG 857C] gi|315292983|gb|EFU52335.1| L-lactate dehydrogenase [Escherichia coli MS 153-1] gi|320179946|gb|EFW54888.1| L-lactate dehydrogenase [Shigella boydii ATCC 9905] gi|320193885|gb|EFW68518.1| L-lactate dehydrogenase [Escherichia coli WV_060327] gi|323965872|gb|EGB61320.1| FMN-dependent dehydrogenase [Escherichia coli M863] gi|323975172|gb|EGB70277.1| FMN-dependent dehydrogenase [Escherichia coli TW10509] gi|324008113|gb|EGB77332.1| L-lactate dehydrogenase [Escherichia coli MS 57-2] gi|324012632|gb|EGB81851.1| L-lactate dehydrogenase [Escherichia coli MS 60-1] gi|327250730|gb|EGE62432.1| L-lactate dehydrogenase [Escherichia coli STEC_7v] gi|330909672|gb|EGH38186.1| L-lactate dehydrogenase [Escherichia coli AA86] gi|331041921|gb|EGI14065.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M605] gi|331053143|gb|EGI25176.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA206] gi|332084451|gb|EGI89646.1| L-lactate dehydrogenase [Shigella dysenteriae 155-74] gi|332084787|gb|EGI89970.1| L-lactate dehydrogenase [Shigella boydii 5216-82] Length = 396 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|300907649|ref|ZP_07125277.1| L-lactate dehydrogenase [Escherichia coli MS 84-1] gi|300919826|ref|ZP_07136300.1| L-lactate dehydrogenase [Escherichia coli MS 115-1] gi|301303841|ref|ZP_07209960.1| L-lactate dehydrogenase [Escherichia coli MS 124-1] gi|300400585|gb|EFJ84123.1| L-lactate dehydrogenase [Escherichia coli MS 84-1] gi|300413126|gb|EFJ96436.1| L-lactate dehydrogenase [Escherichia coli MS 115-1] gi|300840804|gb|EFK68564.1| L-lactate dehydrogenase [Escherichia coli MS 124-1] gi|315253994|gb|EFU33962.1| L-lactate dehydrogenase [Escherichia coli MS 85-1] Length = 396 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|294490199|gb|ADE88955.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli IHE3034] Length = 396 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|215488885|ref|YP_002331316.1| L-lactate dehydrogenase [Escherichia coli O127:H6 str. E2348/69] gi|312968053|ref|ZP_07782264.1| L-lactate dehydrogenase [Escherichia coli 2362-75] gi|259494970|sp|B7ULG1|LLDD_ECO27 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|215266957|emb|CAS11402.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O127:H6 str. E2348/69] gi|312287312|gb|EFR15221.1| L-lactate dehydrogenase [Escherichia coli 2362-75] Length = 396 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|117625883|ref|YP_859206.1| L-lactate dehydrogenase [Escherichia coli APEC O1] gi|166990702|sp|A1AHE2|LLDD_ECOK1 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|115515007|gb|ABJ03082.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli APEC O1] Length = 396 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|16131476|ref|NP_418062.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. MG1655] gi|89110406|ref|AP_004186.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. W3110] gi|157163089|ref|YP_001460407.1| L-lactate dehydrogenase [Escherichia coli HS] gi|170018162|ref|YP_001723116.1| L-lactate dehydrogenase [Escherichia coli ATCC 8739] gi|170083113|ref|YP_001732433.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. DH10B] gi|187734173|ref|YP_001882303.1| L-lactate dehydrogenase [Shigella boydii CDC 3083-94] gi|194435851|ref|ZP_03067954.1| L-lactate dehydrogenase [Escherichia coli 101-1] gi|218707240|ref|YP_002414759.1| L-lactate dehydrogenase [Escherichia coli UMN026] gi|238902696|ref|YP_002928492.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BW2952] gi|253771552|ref|YP_003034383.1| L-lactate dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038805|ref|ZP_04872857.1| L-lactate dehydrogenase [Escherichia sp. 1_1_43] gi|254163535|ref|YP_003046643.1| L-lactate dehydrogenase [Escherichia coli B str. REL606] gi|256025664|ref|ZP_05439529.1| L-lactate dehydrogenase [Escherichia sp. 4_1_40B] gi|293407229|ref|ZP_06651153.1| lldD [Escherichia coli FVEC1412] gi|293463932|ref|ZP_06664346.1| L-lactate dehydrogenase [Escherichia coli B088] gi|297521687|ref|ZP_06940073.1| L-lactate dehydrogenase [Escherichia coli OP50] gi|298382976|ref|ZP_06992571.1| L-lactate dehydrogenase [Escherichia coli FVEC1302] gi|300822378|ref|ZP_07102518.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|300898752|ref|ZP_07117060.1| L-lactate dehydrogenase [Escherichia coli MS 198-1] gi|300927963|ref|ZP_07143521.1| L-lactate dehydrogenase [Escherichia coli MS 187-1] gi|300948063|ref|ZP_07162201.1| L-lactate dehydrogenase [Escherichia coli MS 116-1] gi|300954501|ref|ZP_07166950.1| L-lactate dehydrogenase [Escherichia coli MS 175-1] gi|301028363|ref|ZP_07191611.1| L-lactate dehydrogenase [Escherichia coli MS 196-1] gi|301644270|ref|ZP_07244274.1| L-lactate dehydrogenase [Escherichia coli MS 146-1] gi|307140304|ref|ZP_07499660.1| L-lactate dehydrogenase [Escherichia coli H736] gi|312972109|ref|ZP_07786283.1| L-lactate dehydrogenase [Escherichia coli 1827-70] gi|331644324|ref|ZP_08345453.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H736] gi|331655238|ref|ZP_08356237.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M718] gi|331670449|ref|ZP_08371288.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA271] gi|331679699|ref|ZP_08380369.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H591] gi|462488|sp|P33232|LLDD_ECOLI RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990701|sp|A8A670|LLDD_ECOHS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491774|sp|B2U5C2|LLDD_SHIB3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494977|sp|C4ZXJ7|LLDD_ECOBW RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494978|sp|B1X8M0|LLDD_ECODH RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494979|sp|B1IZI5|LLDD_ECOLC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494980|sp|B7NER0|LLDD_ECOLU RecName: Full=L-lactate dehydrogenase [cytochrome] gi|404695|gb|AAA03585.1| L-lactate dehydrogenase [Escherichia coli] gi|1790033|gb|AAC76629.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. MG1655] gi|85676437|dbj|BAE77687.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K12 substr. W3110] gi|157068769|gb|ABV08024.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli HS] gi|169753090|gb|ACA75789.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli ATCC 8739] gi|169890948|gb|ACB04655.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. DH10B] gi|187431165|gb|ACD10439.1| L-lactate dehydrogenase (cytochrome) [Shigella boydii CDC 3083-94] gi|194425394|gb|EDX41378.1| L-lactate dehydrogenase [Escherichia coli 101-1] gi|218434337|emb|CAR15261.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli UMN026] gi|226838770|gb|EEH70797.1| L-lactate dehydrogenase [Escherichia sp. 1_1_43] gi|238861672|gb|ACR63670.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BW2952] gi|242379129|emb|CAQ33931.1| L-lactate dehydrogenase [Escherichia coli BL21(DE3)] gi|253322596|gb|ACT27198.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975436|gb|ACT41107.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli B str. REL606] gi|253979592|gb|ACT45262.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BL21(DE3)] gi|260447376|gb|ACX37798.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli DH1] gi|284923641|emb|CBG36738.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli 042] gi|291321564|gb|EFE61000.1| L-lactate dehydrogenase [Escherichia coli B088] gi|291426040|gb|EFE99074.1| lldD [Escherichia coli FVEC1412] gi|298276812|gb|EFI18330.1| L-lactate dehydrogenase [Escherichia coli FVEC1302] gi|299878587|gb|EFI86798.1| L-lactate dehydrogenase [Escherichia coli MS 196-1] gi|300318534|gb|EFJ68318.1| L-lactate dehydrogenase [Escherichia coli MS 175-1] gi|300357605|gb|EFJ73475.1| L-lactate dehydrogenase [Escherichia coli MS 198-1] gi|300452381|gb|EFK16001.1| L-lactate dehydrogenase [Escherichia coli MS 116-1] gi|300463998|gb|EFK27491.1| L-lactate dehydrogenase [Escherichia coli MS 187-1] gi|300525025|gb|EFK46094.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|301077393|gb|EFK92199.1| L-lactate dehydrogenase [Escherichia coli MS 146-1] gi|309704009|emb|CBJ03355.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli ETEC H10407] gi|310334486|gb|EFQ00691.1| L-lactate dehydrogenase [Escherichia coli 1827-70] gi|315138187|dbj|BAJ45346.1| lldD [Escherichia coli DH1] gi|315618691|gb|EFU99277.1| L-lactate dehydrogenase [Escherichia coli 3431] gi|320201365|gb|EFW75946.1| L-lactate dehydrogenase [Escherichia coli EC4100B] gi|323934849|gb|EGB31231.1| FMN-dependent dehydrogenase [Escherichia coli E1520] gi|323939633|gb|EGB35839.1| FMN-dependent dehydrogenase [Escherichia coli E482] gi|323959856|gb|EGB55504.1| FMN-dependent dehydrogenase [Escherichia coli H489] gi|323971250|gb|EGB66495.1| FMN-dependent dehydrogenase [Escherichia coli TA007] gi|331036618|gb|EGI08844.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H736] gi|331047253|gb|EGI19331.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M718] gi|331062511|gb|EGI34431.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA271] gi|331072871|gb|EGI44196.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H591] gi|332345576|gb|AEE58910.1| L-lactate dehydrogenase [Escherichia coli UMNK88] Length = 396 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|307594491|ref|YP_003900808.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta distributa DSM 14429] gi|307549692|gb|ADN49757.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta distributa DSM 14429] Length = 460 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%) Query: 236 IVFQDWGIPTPLSLEM---ARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +D G PT ++L+ AR + + +G L NG ++K++ LGAS +A PFL Sbjct: 338 VAMKDLGYPTIVALKKIHDARKLGIMDTSLLLAGRLYNGSHVVKAVALGASGAYMARPFL 397 Query: 292 KPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 AM V+ IE++++E + + LG ++E+ Sbjct: 398 IAAMVKGEKGVLNYIEAVKEEMQMLVSALGKYDIREV 434 >gi|332997601|gb|EGK17215.1| L-lactate dehydrogenase [Shigella flexneri K-272] Length = 392 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|293413042|ref|ZP_06655710.1| lldD [Escherichia coli B354] gi|301018937|ref|ZP_07183160.1| L-lactate dehydrogenase [Escherichia coli MS 69-1] gi|291468689|gb|EFF11182.1| lldD [Escherichia coli B354] gi|300399431|gb|EFJ82969.1| L-lactate dehydrogenase [Escherichia coli MS 69-1] Length = 396 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|17227666|ref|NP_484214.1| glycolate oxidase [Nostoc sp. PCC 7120] gi|17135148|dbj|BAB77694.1| glycolate oxidase [Nostoc sp. PCC 7120] Length = 365 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 30/187 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 H G GLF + Q N + DL L S +PL+LK + L D Sbjct: 201 HAPGESGLFTYFAQ-----QLNPALTWDDLE----WLQSLSPLPLVLKGI---LRGDDAA 248 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 ++ G + ++ GG R L+ I + +P E+ +A+ Sbjct: 249 RAVEYGAKAIVVSNHGG---------RQLDGAIASLD---ALP-----EIVAAVNGKAEV 291 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + GG+R G DI+K++ +GA + P L A+ V I L+KE V+M L+G Sbjct: 292 LLDGGIRRGTDIIKALAIGAQAVLIGRPVLWGLAVGGQAGVSHVISLLQKELNVAMALIG 351 Query: 321 TKRVQEL 327 ++Q++ Sbjct: 352 CSQLQDI 358 >gi|323454436|gb|EGB10306.1| hypothetical protein AURANDRAFT_22728 [Aureococcus anophagefferens] Length = 430 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV-AAIESLRKEFIVSMFLL 319 I GG++ G DI K++ LGAS G+ PFL A V + L E M LL Sbjct: 334 LILDGGVQRGTDIAKALALGASAVGVGKPFLYGLGAGGKAGVDKCFDVLDAELRTCMGLL 393 Query: 320 GTKRVQEL 327 G + V EL Sbjct: 394 GVRTVAEL 401 >gi|302405553|ref|XP_003000613.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261360570|gb|EEY22998.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 486 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 R +C E + GG G DILK++ LGA+ G+ P L + + V ++ L Sbjct: 374 RKHCPEVFEKLEVYVDGGFERGSDILKAVALGATAVGIGRPTLYSLVYGQEGVEHLVQIL 433 Query: 309 RKEFIVSMFLLGTKRVQE 326 + E SM L G + E Sbjct: 434 KDELETSMRLCGITSLDE 451 >gi|75907652|ref|YP_321948.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Anabaena variabilis ATCC 29413] gi|75701377|gb|ABA21053.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Anabaena variabilis ATCC 29413] Length = 366 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 E+ +A+ + GG+R G DI+K++ +GA + P L A+ V I L Sbjct: 280 EIVAAVNGKAEVLLDGGIRRGTDIIKALAIGAQAVLIGRPILWGLAVGGQAGVSHVISLL 339 Query: 309 RKEFIVSMFLLGTKRVQEL 327 +KE V+M L+G ++Q++ Sbjct: 340 QKELNVAMALMGCSQLQDI 358 >gi|188495740|ref|ZP_03003010.1| L-lactate dehydrogenase [Escherichia coli 53638] gi|188490939|gb|EDU66042.1| L-lactate dehydrogenase [Escherichia coli 53638] Length = 396 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|15678222|ref|NP_275337.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621238|gb|AAB84700.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 499 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DLS KI+ L D VP+++K G + D+++ K+G + G +GGT Sbjct: 286 DLSMKISQLREITDWKVPIMVKFTS-GRVADDVKIAAKAGADAVVVDGMQGGTG------ 338 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLRNGVDILKSIILG 280 + +V + GIPT ++ A +E IA+GG+R+G D+ K+I LG Sbjct: 339 -----AGPDVVTEHSGIPTIAAIVEADEALKEVNLRDEVSLIAAGGIRSGADVAKAIALG 393 Query: 281 A 281 A Sbjct: 394 A 394 >gi|183221106|ref|YP_001839102.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911197|ref|YP_001962752.1| hypothetical protein LBF_1667 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775873|gb|ABZ94174.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779528|gb|ABZ97826.1| Conserved hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 288 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 21/131 (16%) Query: 32 IHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA 91 + +P+I FDE DP EF GK ++ + G + + R A EK KV ++ Sbjct: 45 VKETIPKIVFDEDDP--EFFGKN-------TATSQGKSHSMARKK-----AKEKLKVRLS 90 Query: 92 VGSQRVMF-SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF----GVQKAHQAVHVLGA 146 + ++F +D+ + ++ Q A L S +GA + YDF V +A ++ + G Sbjct: 91 QRLESMLFNADYTIFEYTQVNQQA-RLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGK 149 Query: 147 DGLFLHLNPLQ 157 DG+ H+ P++ Sbjct: 150 DGILAHI-PME 159 >gi|7431428|pir||T10242 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) - cucurbit gi|217909|dbj|BAA03131.1| glycolate oxidase [Cucurbita cv. Kurokawa Amakuri] Length = 367 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + +P+L+K V L++ D + ++SG ++ G R L Sbjct: 216 VKWLQTITKLPILVKGV---LTAEDTRIAVQSGAAGIIVSNHGA---------RQL---- 259 Query: 235 GIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 D+ T ++LE + + E GG+R G D+ K++ LGAS + P + Sbjct: 260 -----DYVPATIMALEEVVKAARGEVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFS 314 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A + V ++ LR EF + M L G + +QE+ N Sbjct: 315 LAAEGEAGVRKVLQMLRDEFELIMALSGCRSLQEITRN 352 >gi|86136046|ref|ZP_01054625.1| L-lactate dehydrogenase, putative [Roseobacter sp. MED193] gi|85826920|gb|EAQ47116.1| L-lactate dehydrogenase, putative [Roseobacter sp. MED193] Length = 388 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Query: 258 EAQFIASGGLRNGVDILKSIILGA--SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 E + I G+R+G D+LKS+ +GA ++ G A + AM V A+E ++KE + Sbjct: 301 EVEVILDSGIRSGQDVLKSLAMGADGTMIGRAFVYGLGAM-GQKGVTTALEVIQKELDTT 359 Query: 316 MFLLGTKRVQELYLNTALI 334 M L G + V+ L + LI Sbjct: 360 MALCGERSVENLGRHNLLI 378 >gi|66802328|ref|XP_629946.1| hydroxyacid oxidase [Dictyostelium discoideum AX4] gi|74996527|sp|Q54E41|HAOX_DICDI RecName: Full=Hydroxyacid oxidase; Short=HAOX; AltName: Full=Glycolate oxidase; Short=GOX gi|60463337|gb|EAL61528.1| hydroxyacid oxidase [Dictyostelium discoideum AX4] Length = 388 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 33/166 (19%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P+L+K + C D EL L+ G ++ GG R L++ Sbjct: 244 LKSITKLPILVKGIMC---PKDAELALQYGADGIIVSNHGG---------RQLDT----- 286 Query: 238 FQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 P ++E+ PY ++ I GG+R G D+LK++ GA+ + P + Sbjct: 287 -------CPSTIEVL-PYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIW 338 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + D V+ + L E ++M L G + + +N ++I Q Sbjct: 339 GLSTGGKDGVLKVLNLLNSELQLAMALTGITNISD--INNSIIWDQ 382 >gi|304314019|ref|YP_003849166.1| glutamate synthase, alpha subunit related protein [Methanothermobacter marburgensis str. Marburg] gi|302587478|gb|ADL57853.1| glutamate synthase, alpha subunit related protein [Methanothermobacter marburgensis str. Marburg] Length = 481 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 60/293 (20%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEF---LGK------KLSFPLLISSMTGGNNKMIERIN 76 DD H + + I + +P VE +G+ KLS P++IS M+ G ++ Sbjct: 112 LDDIHFVPAQVSSIPLNADEP-VETGVTIGEMADKPLKLSSPIMISGMSYGA------VS 164 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 +N +A T + +G S + +E+ + + ++ + G + D +Q+ Sbjct: 165 KNTRMAIASTAAKLGIG----FNSGEGGVLEYEMEKAGDYLIVQYSTGRFGVTEDI-LQR 219 Query: 137 AHQAVHVLGADGLF----LHLNP---------LQEIIQPNGN---------TNFADLSSK 174 A A+ + G + +L P ++ + + G+ N +L K Sbjct: 220 A-AAIEIRFGQGAYPGKGSYLPPEKITDDVARVRGLKEGEGSYSPAHHPDIRNQEELREK 278 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L + ++GCG D++ L +G+ + + G GG + + RD Sbjct: 279 VSYLRELSGGSPVGAKIGCGNVEDDVKALLDAGVDFIALDGFGGGTGAVNPHIRD----- 333 Query: 235 GIVFQDWGIPTPLSL-EMARPYCNEA-----QFIASGGLRNGVDILKSIILGA 281 GIP ++ A+ NE IA GGLR G D+ K + LGA Sbjct: 334 -----STGIPLIAAIPRAAKVIVNEGLEGRVSLIAGGGLRTGADMAKCLALGA 381 >gi|256829752|ref|YP_003158480.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfomicrobium baculatum DSM 4028] gi|256578928|gb|ACU90064.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfomicrobium baculatum DSM 4028] Length = 338 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLL 319 I GG+R G D+LK + LGA + PF AM + ++ V +LR E + +M + Sbjct: 262 IIVDGGVRTGADVLKMLALGADAIMVGRPFSIAAMGNLTEGVATYSATLRTELMQAMVMT 321 Query: 320 GTKRVQEL 327 GT+ + ++ Sbjct: 322 GTESIAKV 329 >gi|223938158|ref|ZP_03630055.1| FMN-dependent alpha-hydroxy acid dehydrogenase [bacterium Ellin514] gi|223893202|gb|EEF59666.1| FMN-dependent alpha-hydroxy acid dehydrogenase [bacterium Ellin514] Length = 363 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 29/151 (19%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L S D+P+++K V D EL ++ G+ ++ G R +++ Sbjct: 218 VEWLRSITDLPIIVKGV---CRPDDAELAIQHGVSAVLVSNHGA---------RQMDT-- 263 Query: 235 GIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 P ++E +A + GG+R G+D+ K++ LGA+ + P Sbjct: 264 ----------APATIEVLPAIAEQVAGRVPVLLDGGIRRGLDVFKALALGATAVQIGRPV 313 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 L A V A+E LRKE ++M L G Sbjct: 314 LWGLANGGQQGVQTALELLRKELDLAMALAG 344 >gi|221065638|ref|ZP_03541743.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] gi|220710661|gb|EED66029.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] Length = 413 Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 63/157 (40%), Gaps = 36/157 (22%) Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRD------------------LESDIG---IVFQDWG 242 L SG D GR +W IE R + +DIG IV + G Sbjct: 250 LLSGTAIRDTTGRDHLNWKHIERIRQRWQGNLIIKGILNEDDAVMAADIGAQGIVVSNHG 309 Query: 243 ------IPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + PL + PY + + G+R G D+LK++ LGA + L PF+ Sbjct: 310 GRQLDGVVAPLQML---PYVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVFLGRPFM 366 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V AI LR E +M +LG + E+ Sbjct: 367 YAAAVGGAQGVDHAITLLRDEVDRNMAMLGATSMAEI 403 >gi|326472276|gb|EGD96285.1| mitochondrial cytochrome b2 [Trichophyton tonsurans CBS 112818] Length = 493 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P+ +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 369 DTAPPSIHTLMEIRKYCPEVFNRIEVWIDGGVKRGTDVVKALCLGAKGVGVGRNALFSLA 428 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E + +M LLG +V++L ++N + Q Sbjct: 429 AGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 474 >gi|312213907|emb|CBX93909.1| similar to mitochondrial cytochrome b2 [Leptosphaeria maculans] Length = 499 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GGLR+G D+LK++ LGA+ G+ PFL + V ++ L +E M L Sbjct: 405 EIFVDGGLRDGNDVLKALCLGATAVGVGRPFLYALGAYGAKGVERCVDILAEELQTGMRL 464 Query: 319 LG 320 LG Sbjct: 465 LG 466 >gi|167033256|ref|YP_001668487.1| ferredoxin-dependent glutamate synthase [Pseudomonas putida GB-1] gi|166859744|gb|ABY98151.1| ferredoxin-dependent glutamate synthase [Pseudomonas putida GB-1] Length = 441 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 205 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 264 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 312 Query: 277 IILGA 281 + LGA Sbjct: 313 MALGA 317 >gi|313661515|ref|NP_001186371.1| hydroxyacid oxidase 1 [Gallus gallus] Length = 373 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA + P + + ++ L++EF ++M L G + Sbjct: 295 GGIRKGTDILKALALGAKAVFIGRPLIWGLVYQGEEGAKEVLQMLKEEFRLAMALTGCRT 354 Query: 324 VQELYLNTALIRHQ 337 V+E+ T + RH+ Sbjct: 355 VKEIG-RTLIRRHE 367 >gi|298292487|ref|YP_003694426.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] gi|296928998|gb|ADH89807.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] Length = 369 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%) Query: 167 NFADLSSK---IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + D++++ IA L S +P+LLK + ++ D EL + G ++ GG Sbjct: 217 GYLDVTARWADIAWLRSIARLPILLKGI---MAPEDAELAIGHGADGIVVSNHGGRVLDT 273 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + D+ + V Q P+ ++ GG+R G D+LK++ LGAS Sbjct: 274 MPASLDV---LPAVLQQVAGRVPVLMD--------------GGIRRGTDVLKALALGASA 316 Query: 284 GGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 + P L + A VA + LR E V+M L G + + ++ Sbjct: 317 VMVGRPCLYGLAVAGPAGVAHVLHLLRCELEVAMVLAGCRTLADI 361 >gi|67901994|ref|XP_681253.1| hypothetical protein AN7984.2 [Aspergillus nidulans FGSC A4] gi|40739597|gb|EAA58787.1| hypothetical protein AN7984.2 [Aspergillus nidulans FGSC A4] gi|259480735|tpe|CBF73650.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 503 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%) Query: 249 LEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVA 303 LE+ R +C E + GG+R G D++K+I LGA GL P L + + V Sbjct: 393 LEINR-FCPEVLKRVEVYLDGGVRRGTDVIKAICLGAKGVGLGRPLLYALSGYGTGGVDK 451 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL---YLNTALI 334 A++ L E S+ L+G V EL ++NT + Sbjct: 452 ALQILSDEIETSLRLMGVVDVSELDLSFVNTTAL 485 >gi|163854584|ref|YP_001628882.1| L-lactate dehydrogenase [Bordetella petrii DSM 12804] gi|163258312|emb|CAP40611.1| L-lactate dehydrogenase [Bordetella petrii] Length = 404 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D +K++ LGA + PF ++ D V A++ +R E +M +LG R+ Sbjct: 333 GVRRGTDAMKALALGAHAVFVGRPFNYAASVAGEDGVRHALQLMRDEIARNMGMLGITRL 392 Query: 325 QEL 327 QEL Sbjct: 393 QEL 395 >gi|308094481|ref|ZP_07662942.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AN-5034] gi|308095451|ref|ZP_07663286.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus Peru-466] gi|308125900|ref|ZP_07663561.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus K5030] gi|308087107|gb|EFO36802.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus Peru-466] gi|308090603|gb|EFO40298.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AN-5034] gi|308114335|gb|EFO51875.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus K5030] Length = 469 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 135 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 181 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + YD QA H G G HL + + + P Sbjct: 182 AANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 241 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L + Y Sbjct: 242 EGQPAISPPTFTDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDASADYI 301 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 302 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 351 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA +A+ AM S V A I Sbjct: 352 GLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|260824425|ref|XP_002607168.1| hypothetical protein BRAFLDRAFT_57337 [Branchiostoma floridae] gi|229292514|gb|EEN63178.1| hypothetical protein BRAFLDRAFT_57337 [Branchiostoma floridae] Length = 374 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 27/157 (17%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LK + LS+ D ++ ++ G+ ++ GG R+L+ G+ Sbjct: 226 LPVVLKGI---LSADDAKMAVERGVNGIYVSNHGG---------RELD----------GV 263 Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 P + + + R +A+ GG+R G D+LK++ LGA + P L A + + Sbjct: 264 PATIDVLPNIVRAVDGKAEVYLDGGVRTGTDVLKALALGARCVFIGRPALWGLAHNGEEG 323 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V ++ L E ++M G ++ + + +L+ HQ Sbjct: 324 VQQVLQILTDELSLAMARAGCSKISD--IQPSLVVHQ 358 >gi|116790018|gb|ABK25472.1| unknown [Picea sitchensis] gi|116790027|gb|ABK25475.1| unknown [Picea sitchensis] gi|224285516|gb|ACN40478.1| unknown [Picea sitchensis] Length = 367 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 25/159 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + ++P+L+K V +++ D L +++G++ ++ G R L+ Sbjct: 216 VKWLQTITNLPILVKGV---MTAEDTRLAVQAGVQGIIVSNHGA---------RQLDY-- 261 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 +P +S E+ + GG+R G D+ K++ LGAS + P + Sbjct: 262 --------VPATISSLEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVF 313 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A + V ++ LR EF ++M L G V+E+ N Sbjct: 314 SLAAEGEAGVRNVLQMLRDEFELTMALAGCCSVKEINRN 352 >gi|160900052|ref|YP_001565634.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] gi|160365636|gb|ABX37249.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] Length = 393 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 +E +A GG+R G D+LK+I LGA+ + P L ++ A VA + LR E ++ Sbjct: 314 HELPLLADGGIRRGTDVLKAIALGATAVLIGRPVLWGLANAGAAGVAHVLRLLRDELEIA 373 Query: 316 MFLLGTKRVQE 326 M L G + + Sbjct: 374 MALTGCATLAQ 384 >gi|114330395|ref|YP_746617.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrosomonas eutropha C91] gi|114307409|gb|ABI58652.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrosomonas eutropha C91] Length = 365 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 29/170 (17%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 NG A +A L +PLL+K + L S D E + G ++ GG Sbjct: 206 NGWMAQAPRWEDLAWLRDQTSLPLLVKGI---LHSEDAEKVINLGCDGLVVSNHGG---- 258 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSII 278 R L+ TP SL P + + + G+RNG DI K++ Sbjct: 259 -----RVLDG------------TPASLACLPPIVSAISGRGKVLFDSGIRNGRDIYKALA 301 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA + P++ A + V I LR E ++M L GT +QE+ Sbjct: 302 LGADAVMVGRPYIWGLATAGALGVAHIIRLLRDELELTMALTGTASIQEI 351 >gi|242799353|ref|XP_002483360.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] gi|218716705|gb|EED16126.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] Length = 493 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Query: 240 DWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 D +P+ L L + C E + GG+R G D+LK+I LGA L P A Sbjct: 371 DTSMPSILVLMEIQMTCPEILDKMEVFIDGGIRRGTDVLKAICLGAKGVCLGRPMFYAAN 430 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 S V A++ + E V+M L+G + E Sbjct: 431 YGSAGVEHALKLVADELQVAMQLVGINSLDE 461 >gi|209886279|ref|YP_002290136.1| L-lactate dehydrogenase [Oligotropha carboxidovorans OM5] gi|209874475|gb|ACI94271.1| L-lactate dehydrogenase [Oligotropha carboxidovorans OM5] Length = 383 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 G P+ +S+ E+ + ++ + + GG+R G DIL+++ GA + ++ Sbjct: 283 GAPSSISVLPEIVQELGSQIEIMFDGGIRTGQDILRALAFGAKSCMIGRAYVHGLGAGGQ 342 Query: 300 AVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 A VA AI+ L KE +M L G RV+++ Sbjct: 343 AGVAKAIDILAKELSTTMGLCGINRVEDI 371 >gi|120555256|ref|YP_959607.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinobacter aquaeolei VT8] gi|120325105|gb|ABM19420.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinobacter aquaeolei VT8] Length = 395 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 N+ + + GG+RNGVD+ +++ LGA+ + P+ A + + + + ++E ++ Sbjct: 304 NDTEILVDGGIRNGVDVFRALALGANGVMIGRPWAWALAAEGQAGLTRLLNTWQQELKLA 363 Query: 316 MFLLGTKRVQEL 327 M L G R+ ++ Sbjct: 364 MTLTGVTRIADI 375 >gi|224076908|ref|XP_002305044.1| predicted protein [Populus trichocarpa] gi|222848008|gb|EEE85555.1| predicted protein [Populus trichocarpa] Length = 368 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 23/158 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + +P+LLK V L++ D L +++G ++ G + S Sbjct: 217 VKWLQTITSLPILLKGV---LTAEDARLAVQNGAAGIIVSNHGARQLDYVPS-------- 265 Query: 235 GIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 T ++LE + + GG+R G D+ K++ LGAS + P + Sbjct: 266 ----------TIIALEEVVKAVQGRVPVFLDGGVRRGTDVFKAMALGASGIFIGRPVVFS 315 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A D V ++ LR EF ++M L G + ++E+ N Sbjct: 316 LAADGEAGVRKVLQMLRDEFELTMALNGCRSLKEISRN 353 >gi|312219892|emb|CBX99834.1| similar to cytochrome b2 [Leptosphaeria maculans] Length = 509 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 18/155 (11%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I S +P++LK V C D+ ++ G+ ++ GG S ++ +++ Sbjct: 327 IPWFRSITKMPIILKGVQC---VEDVIRAVEIGVEGVVLSNHGGRQLDFARSGVEVLAEV 383 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 V + G + + + GG+R DI+K++ LGA G+ PFL A Sbjct: 384 MPVLRQRG------------WQDRIEVYIDGGIRRATDIIKAVALGAKGVGIGRPFLY-A 430 Query: 295 MDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M + V A++ L+ E ++M L+G + +L Sbjct: 431 MSAYGLPGVDRAMQLLKDEMEMNMRLIGASCIADL 465 >gi|153836427|ref|ZP_01989094.1| glutamate synthase domain protein [Vibrio parahaemolyticus AQ3810] gi|149750329|gb|EDM61074.1| glutamate synthase domain protein [Vibrio parahaemolyticus AQ3810] Length = 469 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 135 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 181 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + YD QA H G G HL + + + P Sbjct: 182 AANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 241 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L + Y Sbjct: 242 EGQPAISPPTFTDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDASADYI 301 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 302 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGVSDRVTLIITG 351 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA +A+ AM S V A I Sbjct: 352 GLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|332750103|gb|EGJ80514.1| L-lactate dehydrogenase [Shigella flexneri 4343-70] gi|332997238|gb|EGK16854.1| L-lactate dehydrogenase [Shigella flexneri K-218] Length = 396 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|317034116|ref|XP_001396061.2| (S)-2-hydroxy-acid oxidase [Aspergillus niger CBS 513.88] Length = 370 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 57/335 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE-RINRNLA 80 N+ ++ + L+ R L ++ D +D S GKK+ FPL + + + + A Sbjct: 47 NEAAYNRYKLLPRVLRDV--DVLDTSTTIFGKKVKFPLGFAPAAAHKLAHADGEVGTSRA 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 AA + M + S D + P+ + +S V++ +QKA +A Sbjct: 105 AAAHD--IPMCLSSWATTGIDDVIAQG----TGNPYAMQVSFFKDVEITRRI-IQKAEKA 157 Query: 141 VHVLGADGLFLHLN-PL--QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 G LF+ ++ P+ + + N NF S M P+L + G++ Sbjct: 158 ----GYKALFVSVDLPVLGNRLNESRNNFNF----------PSDMRFPVLAE----GINE 199 Query: 198 MDI----ELGLKSGIRY------------FDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M + E G IR+ +I +G S I+ D + D G++ + Sbjct: 200 MGLKDSYERGYDGTIRWDKTIAWLRQNTKLEIWLKGVYSPEDIQLAIDHKID-GVIISNH 258 Query: 242 G------IPTPL-SLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLK 292 G +P L +L + P + GG+R G D+ K+I LGAS+ + P Sbjct: 259 GGRQLDGVPATLDALRICAPVAKGKIPLAVDGGIRRGADVFKAIALGASMCFVGRIPIWG 318 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V A++ L EF +M L G + + ++ Sbjct: 319 LAYNGEKGVDLAVKILYDEFCRTMKLAGCRTIADI 353 >gi|222832298|gb|EEE70775.1| predicted protein [Populus trichocarpa] Length = 308 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA + PF ++ V A+ LR+E + M +LG R+ Sbjct: 232 GVRRGTDVLKALALGARCVFVGRPFNYAASVGGPAGVTHAMALLREEVLRDMAMLGATRL 291 Query: 325 QELYLNTALIRH 336 + + A +RH Sbjct: 292 DQ--VTPACVRH 301 >gi|302883841|ref|XP_003040819.1| hypothetical protein NECHADRAFT_94898 [Nectria haematococca mpVI 77-13-4] gi|256721710|gb|EEU35106.1| hypothetical protein NECHADRAFT_94898 [Nectria haematococca mpVI 77-13-4] Length = 356 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 74/330 (22%), Positives = 129/330 (39%), Gaps = 60/330 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL---------------LISSMTG 66 N+ FD + L R L ++S +D S FLG +++FP +++ G Sbjct: 39 NEAAFDRYKLRPRNLKDVS--ALDTSTTFLGTRVTFPYGFSPSGQHQLAHPDGEVATSKG 96 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVM----FSDHNAIKSFELRQYAPH------ 116 I + + + +A G+ +M F D + K+ E+ + A Sbjct: 97 AAKNNIPMVLSTYTSKSPEDVIAQGTGNPYMMHICFFKDRS--KTLEIIKRAEAAGFKAV 154 Query: 117 --TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 +V ++ LG Y + +VL AD ++ + + + + D S K Sbjct: 155 IVSVDVAALGLRLNEYRNNFKLPPGVTNVLIAD----PTGAQKKRPEWDPSITWGD-SIK 209 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + M++ L + L+ D+ L ++ G+ I+ GG R L+ Sbjct: 210 WLRQHTKMEIWLKGSKGTLVLTYYDVALAIRHGVDGILISNHGG---------RQLD--- 257 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGA--SLGGLASPF 290 G+P L E A N+ + GG+R G DI K++ LGA L G P Sbjct: 258 -------GVPATLDALRECAPVANNKIKLAVDGGIRRGSDIFKALALGADFCLAG-RPPL 309 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 A + +D V +++ L +EF M L G Sbjct: 310 WGLAYNGADGVDLSVKILLREFRTCMALCG 339 >gi|291398148|ref|XP_002715438.1| PREDICTED: hydroxyacid oxidase 2 [Oryctolagus cuniculus] Length = 395 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 252 LSWFQSMTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDGVAASIDALTEV 308 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 309 VAAVK-----------------GKIEVYLDGGVRTGNDVLKALALGAKCVFLGRPILWGL 351 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + L+ E +SM L G + V E+ Sbjct: 352 AYKGEHGVKEVLNILKNELHISMALTGCRSVTEI 385 >gi|148909048|gb|ABR17627.1| unknown [Picea sitchensis] Length = 367 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 25/159 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + ++P+L+K V +++ D L +++G++ ++ G R L+ Sbjct: 216 VKWLQTITNLPILVKGV---MTAEDTRLAVQAGVQGIIVSNHGA---------RQLDY-- 261 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 +P +S E+ + GG+R G D+ K++ LGAS + P + Sbjct: 262 --------VPATISSLEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVF 313 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A + V ++ LR EF ++M L G V+E+ N Sbjct: 314 SLAAEGEAGVRNVLQMLRDEFELTMALAGCCSVKEINRN 352 >gi|260791285|ref|XP_002590670.1| hypothetical protein BRAFLDRAFT_125550 [Branchiostoma floridae] gi|229275866|gb|EEN46681.1| hypothetical protein BRAFLDRAFT_125550 [Branchiostoma floridae] Length = 1115 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 72/335 (21%), Positives = 132/335 (39%), Gaps = 68/335 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-NRNLA 80 N + F + LI R L ++S D SV LG KL P+ I+ I R + + Sbjct: 41 NLEAFRRYRLIPRNLRDVSIR--DTSVTVLGTKLDIPVAIAPTA------IHRFAHPDAE 92 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP------HTVLISNLGAVQLNYDFGV 134 +A K AM G ++ S + E+ + AP + + ++ G V+ + Sbjct: 93 LATAKGAAAMNTG---MVLSSWSTRSLEEVAEAAPGGVHWFYMLFFNDRGYVKRQLERAE 149 Query: 135 QKAHQAVHVLGADGLFLH--LNP--------LQEIIQPNGNTNFADLSSKIALLS----- 179 + + A+ + LF +P I + + F + +LL Sbjct: 150 RAGYSAIFLTIDQPLFPKPGASPRSYPFTVRFPNIFETDPPHAFGTAEYRQSLLELVKEY 209 Query: 180 ----------SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +P++LK V LS D ++ + G++ ++ GG R+ Sbjct: 210 ATWEDVEWVVANTRLPVVLKGV---LSGEDAKMAVDRGVKGIYVSNHGG---------RE 257 Query: 230 LESDIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 L+ G+P + + + R +A+ GG+R G D+LK++ LGA + Sbjct: 258 LD----------GVPATIDVLPHIVRAVDGKAEVYLDGGVRTGTDVLKALALGARCVFIG 307 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 P L A + ++ V ++ L +E +M GT Sbjct: 308 RPALWGLAHNGAEGVQQVLQILTEELSQAMARAGT 342 >gi|197287379|ref|YP_002153251.1| oxidase [Proteus mirabilis HI4320] gi|227358382|ref|ZP_03842722.1| possible (S)-2-hydroxy-acid oxidase [Proteus mirabilis ATCC 29906] gi|194684866|emb|CAR47004.1| putative oxidase [Proteus mirabilis HI4320] gi|227161418|gb|EEI46462.1| possible (S)-2-hydroxy-acid oxidase [Proteus mirabilis ATCC 29906] Length = 397 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 129/352 (36%), Gaps = 83/352 (23%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ +++ RAL I F +++ EFLG KL P++ + M + Sbjct: 71 NTNAFNKKYIMPRALQGIEFSDLNLKTEFLGIKLDTPIIQAPMAA------------QGL 118 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ------ 135 A ++ +VA A G + A F L Y T I + Q Y F Q Sbjct: 119 AHQQGEVATAKGMAK-------AGSIFSLSTYGNKT--IKEVAQAQPGYPFFFQLYMSKN 169 Query: 136 ---------KAHQAVHVLGADGLFLHLNP---------LQEIIQ-PNGNTN---FADLSS 173 +A Q GA G+ L ++ ++ Q P G N FA +S Sbjct: 170 DAFNQYILSQAKQ----YGAKGIILTVDSPVGGYREDDIKNSFQFPLGFANLEAFAKISD 225 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLK-SGIRYF----------DIAGRGGTS-- 220 + + + + + DI+ K SG+ D A + G Sbjct: 226 DKSKTGKGSGISEIYAQAKQAFTPADIQYVKKMSGLPVIVKGIESPEDADTAIKAGADAI 285 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKS 276 W R L+S P +++ +A+ + G+R G + K+ Sbjct: 286 WVSNHGGRQLDS------------APATIDVLPAIAKVVNKRVPIVFDSGVRRGSHVFKA 333 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + GA + + P L + ++ V + IE L KE ++M L G + V+E+ Sbjct: 334 LASGADVVAVGRPILYGLNLGGAEGVNSVIEQLNKELRINMMLGGARNVKEI 385 >gi|218691892|ref|YP_002400104.1| L-lactate dehydrogenase [Escherichia coli ED1a] gi|306816044|ref|ZP_07450182.1| L-lactate dehydrogenase [Escherichia coli NC101] gi|259494975|sp|B7N251|LLDD_ECO81 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|218429456|emb|CAR10422.2| L-lactate dehydrogenase, FMN-linked [Escherichia coli ED1a] gi|305850440|gb|EFM50897.1| L-lactate dehydrogenase [Escherichia coli NC101] Length = 396 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L FL + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|225405477|ref|ZP_03760666.1| hypothetical protein CLOSTASPAR_04697 [Clostridium asparagiforme DSM 15981] gi|225042999|gb|EEG53245.1| hypothetical protein CLOSTASPAR_04697 [Clostridium asparagiforme DSM 15981] Length = 484 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 33/244 (13%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L P+ IS M+ G + + L+ + + AM G ++ + +A + + +Y Sbjct: 158 LEHPVYISHMSFG--ALSKETKVALSQGSAMARTAMCSGEGGILPEEMDAAYKY-IFEYV 214 Query: 115 P--HTVLISNL---GAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNPL-QEIIQPN- 163 P ++V NL A+++ G K H+ G+ + + PL Q++I P+ Sbjct: 215 PNLYSVTTENLRRADAIEIKIGQGT-KPGMGGHLPGSKVTPEIAAIRNKPLGQDVISPSK 273 Query: 164 --GNTNFADLSSKI-ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 G DL + + L + P+ +K + G D+E + + + I GRGG + Sbjct: 274 FPGIDTKEDLKALVDRLREESGGRPIGIK-IAAGRIERDLEFCVFAEPDFVTIDGRGGAT 332 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKS 276 + + RD S +PT +L A+ Y N+A Q + +GGLR D K+ Sbjct: 333 GASPKLIRDATS----------VPTIYALHRAKAYLNKAGSPIQLVITGGLRVSSDFAKA 382 Query: 277 IILG 280 + +G Sbjct: 383 LAMG 386 >gi|229589812|ref|YP_002871931.1| putative glutamate synthase large subunit [Pseudomonas fluorescens SBW25] gi|229361678|emb|CAY48559.1| putative glutamate synthase large subunit [Pseudomonas fluorescens SBW25] Length = 440 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA L D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 205 TGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 264 Q-----------EVFIEHVGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 312 Query: 277 IILGA 281 + +GA Sbjct: 313 MAMGA 317 >gi|328470562|gb|EGF41473.1| putative glutamate synthetase [Vibrio parahaemolyticus 10329] Length = 513 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 179 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 225 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + YD QA H G G HL + + + P Sbjct: 226 AANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 285 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L + Y Sbjct: 286 EGQPAISPPTFTDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDASADYI 345 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 346 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 395 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA +A+ AM S V A I Sbjct: 396 GLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|302882540|ref|XP_003040179.1| hypothetical protein NECHADRAFT_44492 [Nectria haematococca mpVI 77-13-4] gi|256721049|gb|EEU34466.1| hypothetical protein NECHADRAFT_44492 [Nectria haematococca mpVI 77-13-4] Length = 380 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG G DILK+I LGA+ G+ PFL + D L+ E SM L G Sbjct: 289 GGFERGSDILKAIALGATAVGIGRPFLYSLLFGQDGAEHLSHILKDELETSMRLCGITSF 348 Query: 325 QEL---YLNTALIRH 336 +E +NT + H Sbjct: 349 EEARPRLVNTLDVNH 363 >gi|194334880|ref|YP_002016740.1| ferredoxin-dependent glutamate synthase [Prosthecochloris aestuarii DSM 271] gi|194312698|gb|ACF47093.1| ferredoxin-dependent glutamate synthase [Prosthecochloris aestuarii DSM 271] Length = 547 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 93/254 (36%), Gaps = 50/254 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +LS PL +S M+ G + I L+ AE +A G + M D S + Sbjct: 212 QLSMPLFVSDMSFG--ALGREIKIALSRGAETAGTGIASG-EGGMLEDEQRENSHYFYEL 268 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHV-------LGADGLFLHLNPLQEIIQPNG-- 164 AP + +D QA H G GL +EI + G Sbjct: 269 AP----------ARFGWDIEKVARCQAFHFKAGQAAKTGVGGLLPAAKVSEEIARVRGVA 318 Query: 165 -------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 FADL + A +V + G DI+ L++G Y Sbjct: 319 LHHDAVSPAGFADLKTPRDFRRVADEVRRATGGIPVGFKMSAQHIEKDIDFALEAGTDYI 378 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-----FIASGG 266 + GRGG + + + ++ + G+PT +L AR + ++ Q I +GG Sbjct: 379 ILDGRGGGTGAAPD----------LLKNNIGVPTIAALSRARAHLDKRQADGVTLIITGG 428 Query: 267 LRNGVDILKSIILG 280 LR +K++ +G Sbjct: 429 LRTESHFIKALAMG 442 >gi|312960313|ref|ZP_07774824.1| glutamate synthase family protein [Pseudomonas fluorescens WH6] gi|311285535|gb|EFQ64105.1| glutamate synthase family protein [Pseudomonas fluorescens WH6] Length = 440 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA L D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 205 TGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 264 Q-----------EVFIEHVGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 312 Query: 277 IILGA 281 + +GA Sbjct: 313 MAMGA 317 >gi|326479105|gb|EGE03115.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 492 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G+R G DILK++ LGA+ G+ FL + + I+ +R E +M +G + Sbjct: 396 GIRRGTDILKAVCLGATAVGMGRSFLFASNYGQEGAEHLIDIMRDELEGAMRNIGITSLD 455 Query: 326 EL---YLNTALIRH 336 + Y+NTA I H Sbjct: 456 QAGPQYINTADIDH 469 >gi|307941827|ref|ZP_07657181.1| ferredoxin-dependent glutamate synthase [Roseibium sp. TrichSKD4] gi|307774924|gb|EFO34131.1| ferredoxin-dependent glutamate synthase [Roseibium sp. TrichSKD4] Length = 536 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 32/246 (13%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA-IKSFELRQ 112 KL+ PL++S M+ G + E LA AE + G ++ + A + F Sbjct: 205 KLAIPLMVSDMSYG--ALSEPAKLALARGAELAGTGICSGEGGMLPEEQEANSRYFYELA 262 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGN 165 L VQ + G Q A V G LN + I P+ Sbjct: 263 SGRFGFEWDKLAKVQAFHFKGGQGAKTGTGGHLPGNKVKGKIAQVRGLNQGEAAISPSRF 322 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM----DIELGLKSGIRYFDIAGRGGTSW 221 ++AD+S +I + + VG LS+ DI+ L+ G+ Y + GRGG + Sbjct: 323 PDWADIS-QIREFADEVRSRTGGIPVGYKLSAQHVEKDIDAALEVGVDYIILDGRGGGTG 381 Query: 222 SRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILK 275 + I+F+D +PT +L AR + + + + +GGLR D +K Sbjct: 382 A-----------APIIFRDNISVPTIPALARARRHLDSLGRKDVTLVITGGLRKPADFIK 430 Query: 276 SIILGA 281 ++ LGA Sbjct: 431 ALALGA 436 >gi|28900621|ref|NP_800276.1| putative glutamate synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|28809001|dbj|BAC62109.1| putative glutamate synthetase [Vibrio parahaemolyticus RIMD 2210633] Length = 513 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S M+ G +E+ K+A+A G++ + + Sbjct: 179 KLAIPLLVSDMSFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 225 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + YD QA H G G HL + + + P Sbjct: 226 AANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 285 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L + Y Sbjct: 286 EGQPAISPPTFTDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDASADYI 345 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 346 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 395 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA +A+ AM S V A I Sbjct: 396 GLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|160898787|ref|YP_001564369.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160364371|gb|ABX35984.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] Length = 379 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 + + +A G+RNG+D++++I LGA + F+ S +A V +E L KE V+ Sbjct: 299 GQIKILADSGIRNGLDVVRAIALGADCAMIGRAFIYALATSGEAGVKHLLELLEKEMRVA 358 Query: 316 MFLLGTKRVQEL 327 M L +V ++ Sbjct: 359 MTLTSVSKVSDI 370 >gi|326915006|ref|XP_003203813.1| PREDICTED: hydroxyacid oxidase 1-like [Meleagris gallopavo] Length = 358 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK++ LGA + P + + ++ L++EF ++M L G + Sbjct: 280 GGVRKGTDILKALALGAKAVFIGRPLIWGLVYQGEEGAKEVLQMLKEEFRLAMALTGCRT 339 Query: 324 VQELYLNTALIRHQ 337 V+E+ T + RH+ Sbjct: 340 VKEIG-RTLIRRHE 352 >gi|76803190|ref|YP_331285.1| isopentenyl-diphosphate delta-isomerase II 2 [Natronomonas pharaonis DSM 2160] gi|76559055|emb|CAI50653.1| isopentenyl-diphosphate delta-isomerase II 2 [Natronomonas pharaonis DSM 2160] Length = 396 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 78/361 (21%), Positives = 142/361 (39%), Gaps = 76/361 (21%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 R ++ F +W ++ R L + ++ D S E LG+ + +P +++ + G + E A Sbjct: 60 RTEQDFSEWRIVPRMLRGV--EDRDLSTEVLGQTVDYPAMVTPL-GVQTLVDEEGELATA 116 Query: 81 IAAEK---------------TKVAMAVGSQRVMF-----SDHNAIKSFELR-QYAPHTVL 119 A ++ +VA A+G F +D + +SF R + A + + Sbjct: 117 RACDELHVPFILSSLSSTPMEEVAEALGDTPKWFQFYWSADEDIARSFLTRAEEAGYDAI 176 Query: 120 ISNLGAVQLNY-----DFGVQK--AHQAVHVLGADGLF---LHLNPLQEIIQPNGNTN-- 167 + + A L + D G + V +D F L P +E P + Sbjct: 177 VVTVDAPTLGWRERLIDRGYYPFLEGEGVANYFSDPEFRSQLEAPPEEE---PQAAVDHF 233 Query: 168 ---FADLS---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT-- 219 F D S + + D+P+L+K V L D +L ++ G ++ GG Sbjct: 234 LDIFGDASLTWDDLEFVFEHTDLPVLIKGV---LHPEDAKLAVEHGADGVGVSTHGGRQV 290 Query: 220 --SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 S + +E+ D+ +G ++ G+R G DI K++ Sbjct: 291 DGSITALEALPDIVDAVG---------------------DDVTVTFDSGIRRGADIYKAL 329 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA + PF+ A+ D V +E+L +F ++M L G +L T +RH Sbjct: 330 ALGADACLIGRPFIYGLALGGQDGVEHVLENLIADFDLTMGLAGRDAATDLDRET--LRH 387 Query: 337 Q 337 + Sbjct: 388 E 388 >gi|330958710|gb|EGH58970.1| glutamate synthase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 446 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|260802506|ref|XP_002596133.1| hypothetical protein BRAFLDRAFT_202845 [Branchiostoma floridae] gi|229281387|gb|EEN52145.1| hypothetical protein BRAFLDRAFT_202845 [Branchiostoma floridae] Length = 360 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 72/333 (21%), Positives = 125/333 (37%), Gaps = 64/333 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG----------GNNKM 71 N F + LI R L ++S D +V LG KL FP+ I+ K Sbjct: 44 NVDAFKRYRLIPRNLRDVSIR--DTTVTVLGTKLDFPVAIAPTAMQRLAHPDAELATAKG 101 Query: 72 IERINRNLAIAA------EKTKVAMAVGSQR---VMFSDHNAIKS-FELRQYAPHTVLIS 121 +N + +++ E+ A G + + F D + E Q A +T ++ Sbjct: 102 AASVNTGMVLSSWANHSLEEVAKAAPRGVRWFYLLFFKDRRLTRHMLERAQRAGYTAIV- 160 Query: 122 NLGAVQLNYDFGVQK-------------AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 L A Q ++ F + A+ A +G G L+ ++ G Sbjct: 161 -LTADQPSFSFSRHEKPTLPPVLVRYPNAYYAGDPVGLVGTVEVEEHLRATVKVPGTWE- 218 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + + +P++LK + LS D + + G+ ++ GG + + Sbjct: 219 -----DVEWVKKNTSLPVVLKGI---LSVEDAKTAVNLGVDAVYVSNHGGRQMDGLPATI 270 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ DI R +A+ GG+R G D+LK++ LGAS + Sbjct: 271 DVLPDI-----------------VRAVDGKAEVYLDGGVRTGTDVLKALALGASCVFIGR 313 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 P L A + ++ V + LR EF ++M G Sbjct: 314 PALWGLACNGAEGVGQVLRVLRDEFSLAMARAG 346 >gi|134133250|ref|NP_001077011.1| hydroxyacid oxidase 1 [Danio rerio] gi|133778702|gb|AAI33874.1| Hao1 protein [Danio rerio] Length = 369 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 27/165 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L + +P+++K V L++ D + LK G+ ++ G R L+ Sbjct: 222 IGWLKTLTKLPVVVKGV---LTAEDAKEALKYGVDGILVSNHGA---------RQLD--- 266 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+P + E+ + + GG+R G D+LK++ LGA + P L Sbjct: 267 -------GVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALGAKAVFIGRPVLW 319 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A V +E LR+E +++ L G + ++E +N +L+R Sbjct: 320 ALACQGEKGVSDVLEILREELHLALALAGCRSLKE--VNRSLLRR 362 >gi|241205841|ref|YP_002976937.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859731|gb|ACS57398.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 380 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVSLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALI 334 + + +N+++I Sbjct: 367 DIND--VNSSII 376 >gi|238757344|ref|ZP_04618530.1| FMN-dependent dehydrogenase [Yersinia aldovae ATCC 35236] gi|238704383|gb|EEP96914.1| FMN-dependent dehydrogenase [Yersinia aldovae ATCC 35236] Length = 423 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ ++ + I GG+R G DI+K+I LGA+ L ++ V+ +IE L Sbjct: 312 EIKNALGDQIEIIFDGGIRRGSDIIKAIALGANCVSLGRAYIYGLGAGGEKGVLRSIEIL 371 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + E ++ ++G K + EL Sbjct: 372 KNEMEPALKMMGFKSINEL 390 >gi|116253321|ref|YP_769159.1| L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115257969|emb|CAK09067.1| putative L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 380 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL AM + V A+ +RKE ++M L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAM-GKEGVSLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALI 334 + + +N+++I Sbjct: 367 DIND--VNSSII 376 >gi|311106987|ref|YP_003979840.1| L-lactate dehydrogenase [cytochrome] 2 [Achromobacter xylosoxidans A8] gi|310761676|gb|ADP17125.1| L-lactate dehydrogenase [cytochrome] 2 [Achromobacter xylosoxidans A8] Length = 381 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E +R E +M L+G + Sbjct: 310 GGVQRGTHVLKALALGAKAVGLGRYYLFPLAAAGRPGVERALELMRVEIERAMKLMGCRT 369 Query: 324 VQEL 327 V EL Sbjct: 370 VAEL 373 >gi|298487375|ref|ZP_07005422.1| Glutamate synthase [NADPH] large chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158060|gb|EFH99133.1| Glutamate synthase [NADPH] large chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 444 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|169766604|ref|XP_001817773.1| cytochrome B2 [Aspergillus oryzae RIB40] gi|83765628|dbj|BAE55771.1| unnamed protein product [Aspergillus oryzae] Length = 480 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 17/119 (14%) Query: 235 GIVFQDWG------IPTPLS--LEMARPYCNEA----QFIASGGLRNGVDILKSIILGAS 282 GIV + G + TP+ LE+ R +C E I GG++ G D++K++ LGA Sbjct: 339 GIVLSNHGGRALDTVSTPVHVLLEIRR-FCPEVFDRLDVIVDGGIQRGTDVVKALALGAK 397 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ L A V ++ L E +M LLG + V +L ++NT L+ Q Sbjct: 398 AVGIGRAALYGLAAGGQSGVERTLQILADETATAMRLLGVQHVDQLSLQHVNTRLVDSQ 456 >gi|304314406|ref|YP_003849553.1| glutamate synthase, subunit 2 [Methanothermobacter marburgensis str. Marburg] gi|302587865|gb|ADL58240.1| predicted glutamate synthase, subunit 2 [Methanothermobacter marburgensis str. Marburg] Length = 499 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 13/117 (11%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSR--I 224 DLS KI+ L D VP+++K G + D+++ K+G + G +GGT + Sbjct: 286 DLSMKISQLREITDWKVPIMVKFTS-GRVADDVKIAAKAGADIVVVDGMQGGTGAGPDVV 344 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 H + + IV D + ++L +E +A+GG+R+G D+ K+I LGA Sbjct: 345 TEHSGIPTIAAIVEADEAL-KEVNLR------DEVSLVAAGGIRSGADVAKAIALGA 394 >gi|330876279|gb|EGH10428.1| glutamate synthase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 444 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|325265146|ref|ZP_08131872.1| glutamate synthase domain protein [Clostridium sp. D5] gi|324029550|gb|EGB90839.1| glutamate synthase domain protein [Clostridium sp. D5] Length = 468 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 46/259 (17%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEK----TKVAMAVGSQRVMFSDHNAIKSFEL 110 L P+ IS M+ G ++R IA K AM G ++ + A + + Sbjct: 141 LDGPVYISHMSFGA------LSRETKIALSKGSAMAGTAMCSGEGGILPEEMAAAHKY-I 193 Query: 111 RQYAPHTVLIS-----NLGAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNPL-QEII 160 +Y P+ ++ N A++L G K H+ G + + PL +++I Sbjct: 194 FEYVPNKYSVTPENLMNADAIELKIGQGT-KPGMGGHLPGGKVTPEIAAVRNKPLGKDVI 252 Query: 161 QP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P N + DL +++ L S P+ +K + G D+E + + + I Sbjct: 253 SPSKFEEINSKEDLKDLVAQLRLASGGR--PIGVK-IAAGRIEKDLEFCVFAEPDFITID 309 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRN 269 GRGG + + RD S +PT +L A+ Y E + +GGLR Sbjct: 310 GRGGATGASPRLIRDATS----------VPTIYALYRAKKYLREVGADGISLVITGGLRV 359 Query: 270 GVDILKSIILGASLGGLAS 288 D K+I +GA +AS Sbjct: 360 SSDFAKAIAMGADAVAVAS 378 >gi|240280076|gb|EER43580.1| cytochrome b2 [Ajellomyces capsulatus H143] Length = 511 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 22/157 (14%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+LK V +S+ D L +K+G+ ++ GG R+L++ + Sbjct: 334 LPLVLKGV---MSADDAILAMKAGLDGILLSNHGG---------RNLDTSPPALV----- 376 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 T L L P ++ GG+R G DILK++ LGA+ G+ L A + V Sbjct: 377 -TLLELHKRCPEIFDKMGIYVDGGIRRGTDILKAVCLGATAVGMGRSVLFAAAYGQEGVE 435 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + + E +M L+G + + + +NTA I H Sbjct: 436 HLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|15236857|ref|NP_193570.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|75318383|sp|O49506|GLO5_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO5; AltName: Full=Glycolate oxidase 3; Short=AtGLO5; Short=GOX 3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO5 gi|2832641|emb|CAA16716.1| glycolate oxidase - like protein [Arabidopsis thaliana] gi|7268629|emb|CAB78838.1| glycolate oxidase-like protein [Arabidopsis thaliana] gi|25054935|gb|AAN71944.1| putative glycolate oxidase [Arabidopsis thaliana] gi|332658631|gb|AEE84031.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 368 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P L A D V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGVFVGRPSLFSLAADGEAGVRKMLQMLRDEFELTMALSGCRS 345 Query: 324 VQEL 327 ++E+ Sbjct: 346 LREI 349 >gi|327261139|ref|XP_003215389.1| PREDICTED: hydroxyacid oxidase 1-like [Anolis carolinensis] Length = 370 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 5/99 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA L P + A Sbjct: 267 GVPATIEILPEIIEAVEGKIEVFLDGGIRKGTDVLKALALGARAVFLGRPIIWGLAYQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V ++ L++EF ++M L G + V+ ++ L+R + Sbjct: 327 QGVKEVLQILKEEFHLAMALSGCQSVEA--IDRTLVRRE 363 >gi|317053167|ref|YP_004119521.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] gi|316953494|gb|ADU72965.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] Length = 415 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSM 316 + + I G+R G D++K++ LGA L PFL A+ + A + A+ LR E M Sbjct: 330 DMKVIIDSGIRRGTDVMKAMALGADFVFLGRPFLYGAVIGAQAGIEHAMHILRDEIDRDM 389 Query: 317 FLLGTKRVQELYLNTALIR 335 L+G Q L+ AL+R Sbjct: 390 ALIGV--TQPDQLDAALLR 406 >gi|88705628|ref|ZP_01103338.1| L-lactate dehydrogenase [Congregibacter litoralis KT71] gi|88700141|gb|EAQ97250.1| L-lactate dehydrogenase [Congregibacter litoralis KT71] Length = 375 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 +E + GG+R+G+D+++++ LGA + P++ A++ V +E ++E ++ Sbjct: 296 SETEVFIDGGIRSGLDVVRAVALGARGVLMGRPWIYALAVNGEAGVRNLLEIFQREIAIA 355 Query: 316 MFLLGTKRVQEL 327 + L G VQEL Sbjct: 356 LALTGVNSVQEL 367 >gi|20093988|ref|NP_613835.1| glutamate synthase subunit 2 [Methanopyrus kandleri AV19] gi|19886953|gb|AAM01765.1| Glutamate synthase subunit 2 [Methanopyrus kandleri AV19] Length = 429 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 19/120 (15%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 DL KI L D +P+++K G D+++ K+G I G G + + E Sbjct: 217 DLKMKIEQLREITDWKIPIIVK-YSPGRVKEDVKIAAKAGADIIAIDGMQGGTGASPE-- 273 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGA 281 I ++ GIPT +L A NE I SGG+R+G D+ K++ LGA Sbjct: 274 --------IATENAGIPTIAALVQAVEALNEIGMRDEVDIIISGGIRDGADVAKALALGA 325 >gi|6754156|ref|NP_034533.1| hydroxyacid oxidase 1 [Mus musculus] gi|13124296|sp|Q9WU19|HAOX1_MOUSE RecName: Full=Hydroxyacid oxidase 1; Short=HAOX1; AltName: Full=Glycolate oxidase; Short=GOX gi|4585221|gb|AAD25332.1|AF104312_1 glycolate oxidase [Mus musculus] gi|74146415|dbj|BAE28963.1| unnamed protein product [Mus musculus] gi|110645780|gb|AAI19537.1| Hydroxyacid oxidase 1, liver [Mus musculus] gi|111601357|gb|AAI19536.1| Hydroxyacid oxidase 1, liver [Mus musculus] gi|123232007|emb|CAM22526.1| hydroxyacid oxidase 1, liver [Mus musculus] gi|148696426|gb|EDL28373.1| hydroxyacid oxidase 1, liver [Mus musculus] Length = 370 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|72045880|ref|XP_789077.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961737|ref|XP_001190323.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 378 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G DI+K++ LGA + P + A + + ++ L+ EF +M L Sbjct: 294 EVYVDGGVRTGTDIIKALALGARAAFIGRPAIYGIACGGEEGLTDLLDILKDEFSRAMAL 353 Query: 319 LGTKRVQELYLNTALIRHQ 337 G RV++ ++ +L+ H+ Sbjct: 354 SGCARVED--IDRSLVNHR 370 >gi|71733277|ref|YP_275095.1| glutamate synthase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553830|gb|AAZ33041.1| glutamate synthase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323584|gb|EFW79668.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328217|gb|EFW84221.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881952|gb|EGH16101.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330890886|gb|EGH23547.1| glutamate synthase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 444 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|300715771|ref|YP_003740574.1| L-lactate dehydrogenase (cytochrome) [Erwinia billingiae Eb661] gi|299061607|emb|CAX58722.1| L-lactate dehydrogenase (Cytochrome) [Erwinia billingiae Eb661] Length = 381 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A GG+R+G+D+L+ + LGA + FL A D V + KE V+M L Sbjct: 303 ILADGGVRSGLDVLRMLALGADTALIGRAFLYALATDGEAGVTNLLNLFEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 G + + E+ Sbjct: 363 GARCIAEI 370 >gi|296450194|ref|ZP_06891955.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296260957|gb|EFH07791.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] Length = 338 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 67/326 (20%), Positives = 123/326 (37%), Gaps = 60/326 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + +S + D S+E G+K+S P+ +S++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIHNVS--KPDTSIELFGRKMSSPIFAASVSGTLLNMGGKVSEKEY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV------ 134 I E + M D N T L+ NL ++ N G+ Sbjct: 105 I--EPVVRGCSNSGIYAMVGDTNV-----------DTFLLDNLDVLKDNCGNGIVFIKPW 151 Query: 135 --QKAHQAVHVLGADGLF----------LHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 K + + + G F L N LQE N +I L + Sbjct: 152 NNSKIIEKIRLSEEAGAFAVGVDLDACGLINNQLQE------NPFSPKTIDEIRELVEST 205 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P ++K + ++ D + ++SG ++ GG ++ DI Sbjct: 206 RLPFIIKGI---MTVDDALMTVESGASAIIVSNHGGRVLDYTPGTCEVLPDI-------- 254 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 A+ + + GG+R+GVD++K + LGA + PF+ + D V Sbjct: 255 ---------AKAVKGKITILVDGGVRSGVDVVKMLGLGADAVLMGRPFVIASFGGGLDGV 305 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 IE +R E +M L + V+++ Sbjct: 306 EFFIEKVRSELCETMILTACQNVKDI 331 >gi|111019808|ref|YP_702780.1| glutamate synthase large subunit [Rhodococcus jostii RHA1] gi|110819338|gb|ABG94622.1| probable glutamate synthase large subunit [Rhodococcus jostii RHA1] Length = 438 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 21/152 (13%) Query: 166 TNFADLSSKIALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L + + P+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAIKIIELREITNWEKPIYIK-VGATRTYYDVKLAVKAGADVVVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+R+G D+ K+ Sbjct: 263 Q-----------DVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRSGADVAKA 311 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + LGA + + L D+S E L Sbjct: 312 MALGADAVAIGTAALIALGDNSPRYAKQYEEL 343 >gi|330966971|gb|EGH67231.1| glutamate synthase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 446 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|302188154|ref|ZP_07264827.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae 642] Length = 446 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|302131460|ref|ZP_07257450.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 446 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|204928721|ref|ZP_03219920.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322154|gb|EDZ07352.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 396 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA ++ L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLLEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|28869775|ref|NP_792394.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971275|ref|ZP_03399391.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato T1] gi|301385045|ref|ZP_07233463.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato Max13] gi|302059124|ref|ZP_07250665.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato K40] gi|28853020|gb|AAO56089.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923920|gb|EEB57499.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato T1] gi|331014510|gb|EGH94566.1| glutamate synthase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 446 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|255656362|ref|ZP_05401771.1| dehydrogenase [Clostridium difficile QCD-23m63] gi|296878575|ref|ZP_06902580.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] gi|296430382|gb|EFH16224.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] Length = 338 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%) Query: 245 TPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 TP + E +A+ + + GG+R+GVD++K + LGA + PF+ + D Sbjct: 244 TPGTCEVLPDIAKAVKGKITILVDGGVRSGVDVVKMLGLGADAVLMGRPFVIASFGGGLD 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE +R E +M L + V+++ Sbjct: 304 GVEFFIEKVRSELCETMILTACQNVKDI 331 >gi|83644522|ref|YP_432957.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Hahella chejuensis KCTC 2396] gi|83632565|gb|ABC28532.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Hahella chejuensis KCTC 2396] Length = 372 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 21/165 (12%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + +A + S +PL+LK V L D E+ K + ++ GG S D+ Sbjct: 220 TDVAWVKSQTRMPLILKGV---LHPQDAEIAQKHEVDALYLSNHGGRQLDHHVSAIDM-- 274 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FL 291 + + Q G PL I GG+R+G DILK++ LGA G+ P Sbjct: 275 -LPHIRQRLGAAMPL--------------IVDGGIRSGADILKALALGADAVGVGRPALW 319 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A + V A + L + I+SM + G + ++ +H Sbjct: 320 GLAAAGAQGVAAVLRQLIDDLILSMHICGCASLADINQEIICTKH 364 >gi|322612863|gb|EFY09815.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618928|gb|EFY15815.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625295|gb|EFY22122.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630038|gb|EFY26811.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634229|gb|EFY30964.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635870|gb|EFY32579.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643044|gb|EFY39620.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643829|gb|EFY40378.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649821|gb|EFY46244.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653027|gb|EFY49362.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661154|gb|EFY57382.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662357|gb|EFY58570.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667235|gb|EFY63401.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674388|gb|EFY70481.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678404|gb|EFY74465.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680910|gb|EFY76944.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687154|gb|EFY83127.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192114|gb|EFZ77347.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198203|gb|EFZ83310.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200823|gb|EFZ85893.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206577|gb|EFZ91535.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210510|gb|EFZ95396.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216202|gb|EGA00930.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220425|gb|EGA04879.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225288|gb|EGA09522.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228402|gb|EGA12533.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234223|gb|EGA18311.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237208|gb|EGA21275.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244727|gb|EGA28731.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249208|gb|EGA33126.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250919|gb|EGA34795.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256717|gb|EGA40445.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262257|gb|EGA45818.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264532|gb|EGA48036.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268822|gb|EGA52280.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 396 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA ++ L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLLEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|319781875|ref|YP_004141351.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167763|gb|ADV11301.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 382 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 I GG++ G +LK++ LGA G+ +L P A V A+E +R E M L+G Sbjct: 308 IMDGGVQRGTHVLKALSLGAKAVGVGRYYLFPLAAAGQPGVERALEQMRVEIERGMKLMG 367 Query: 321 TKRVQELYLNTALIR 335 +++L N R Sbjct: 368 CSSIEQLSRNNLRFR 382 >gi|33416601|gb|AAH55638.1| Hao1 protein [Danio rerio] Length = 372 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P L A Sbjct: 270 GVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALGAKAVFIGRPVLWALACQGE 329 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E LR+E +++ L G + ++E +N +L+R Sbjct: 330 KGVSDVLEILREELHLALALAGCRSLKE--VNRSLLRR 365 >gi|91774814|ref|YP_544570.1| glutamate synthase (NADPH) GltB2 subunit [Methylobacillus flagellatus KT] gi|91708801|gb|ABE48729.1| glutamate synthase (NADPH) GltB2 subunit [Methylobacillus flagellatus KT] Length = 444 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 27/128 (21%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KIA L D P+ +K VG D+ L +K+G + G +GGT+ + Sbjct: 208 TGPDDLEIKIAELREITDWEKPIYVK-VGATRPYFDVALAVKAGADVVVLDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIP L RP + Q I SGG+RNG D+ Sbjct: 267 Q-----------EVFIEHVGIPI---LAAIRPAVQALQDMGMHRKVQLIVSGGIRNGADV 312 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 313 AKALALGA 320 >gi|66045516|ref|YP_235357.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae B728a] gi|63256223|gb|AAY37319.1| Ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae B728a] gi|330951984|gb|EGH52244.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae Cit 7] gi|330974508|gb|EGH74574.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 446 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|134080800|emb|CAL00914.1| unnamed protein product [Aspergillus niger] Length = 387 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 57/335 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE-RINRNLA 80 N+ ++ + L+ R L ++ D +D S GKK+ FPL + + + + A Sbjct: 64 NEAAYNRYKLLPRVLRDV--DVLDTSTTIFGKKVKFPLGFAPAAAHKLAHADGEVGTSRA 121 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 AA + M + S D + P+ + +S V++ +QKA +A Sbjct: 122 AAAHD--IPMCLSSWATTGIDDVIAQG----TGNPYAMQVSFFKDVEITRRI-IQKAEKA 174 Query: 141 VHVLGADGLFLHLN-PL--QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 G LF+ ++ P+ + + N NF S M P+L + G++ Sbjct: 175 ----GYKALFVSVDLPVLGNRLNESRNNFNF----------PSDMRFPVLAE----GINE 216 Query: 198 MDI----ELGLKSGIRY------------FDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M + E G IR+ +I +G S I+ D + D G++ + Sbjct: 217 MGLKDSYERGYDGTIRWDKTIAWLRQNTKLEIWLKGVYSPEDIQLAIDHKID-GVIISNH 275 Query: 242 G------IPTPL-SLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLK 292 G +P L +L + P + GG+R G D+ K+I LGAS+ + P Sbjct: 276 GGRQLDGVPATLDALRICAPVAKGKIPLAVDGGIRRGADVFKAIALGASMCFVGRIPIWG 335 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V A++ L EF +M L G + + ++ Sbjct: 336 LAYNGEKGVDLAVKILYDEFCRTMKLAGCRTIADI 370 >gi|186470942|ref|YP_001862260.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gi|184197251|gb|ACC75214.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 357 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + G+ N+ FD W L R L ++S + S E LG+++S PL+I+ TG N+ Sbjct: 13 ESGLRHNRAAFDRWELRPRRLIDVS--KRVQSTELLGRQISSPLVIAP-TGLNSAFWPNG 69 Query: 76 NRNLAIAAEKTKVAMAVGSQRVM 98 + +LA AA K + A+ + M Sbjct: 70 DLSLARAASKAGIPFALSTASNM 92 >gi|330813423|ref|YP_004357662.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063] gi|327486518|gb|AEA80923.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063] Length = 382 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + I GG++ G +LK++ LGA + +L + V + LR E Sbjct: 303 DKVEVILDGGVQRGTHVLKALALGAKACSIGKAYLYGLSAGGQVGVEQVVGKLRDEIQRG 362 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G + V+EL N L R Sbjct: 363 MTLMGCRSVKELTKNKVLFR 382 >gi|323155259|gb|EFZ41442.1| L-lactate dehydrogenase domain protein [Escherichia coli EPECa14] Length = 149 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 9/102 (8%) Query: 235 GIVFQDWG---IPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGL 286 GIV + G + LS A P +A +A G+RNG+D+++ I LGA L Sbjct: 22 GIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLL 81 Query: 287 ASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLLGTKRVQEL 327 FL + A VA + +L KE V+M L G K + E+ Sbjct: 82 GRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEI 123 >gi|300782823|ref|YP_003763114.1| (S)-2-hydroxy-acid oxidase [Amycolatopsis mediterranei U32] gi|299792337|gb|ADJ42712.1| (S)-2-hydroxy-acid oxidase [Amycolatopsis mediterranei U32] Length = 356 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L S +P+L+K V L + D L + G+ ++ GG R L++ Sbjct: 216 IAWLRSKTKLPVLIKGV---LHAEDARLAVHHGVAGIVVSNHGG---------RQLDT-- 261 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 +P + + E+A + GG+R G D++K++ LGA G+ P + Sbjct: 262 --------VPATIEVLPEIAAAVGGAIPVLLDGGIRRGTDVVKALALGADAVGVGRPIVW 313 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V ++ LR +F ++ L G + +L Sbjct: 314 GLAAGGREGVSEVLDLLRDDFDQALALCGGRHPADL 349 >gi|296204426|ref|XP_002749326.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [Callithrix jacchus] Length = 933 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 737 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 788 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G W+ I+ HRD+ D+G V + W I Sbjct: 789 ELVSKGEYDWN-IKIHRDIFRSMLMTACDLGAVTKPWEI 826 >gi|330986062|gb|EGH84165.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010367|gb|EGH90423.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 446 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|88799084|ref|ZP_01114664.1| L-lactate dehydrogenase [Reinekea sp. MED297] gi|88778067|gb|EAR09262.1| L-lactate dehydrogenase [Reinekea sp. MED297] Length = 380 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL V A+E + KE ++M G + Sbjct: 307 GGIRSGQDVLKAIALGAKGTYIGRPFLYGLGAQGETGVSKALEIIHKELDLTMAFCGERE 366 Query: 324 VQELYLN 330 + + N Sbjct: 367 LTRINRN 373 >gi|317376213|sp|Q01KC2|GLO2_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 2; Short=GOX 2; Short=OsGLO2; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 gi|317376216|sp|Q7XPR4|GLO2_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 2; Short=GOX 2; Short=OsGLO2; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 Length = 368 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L + +P+L+K + +++ D + ++ G ++ GG R L+ Sbjct: 217 IKWLQTVTSLPVLVKGI---ITAQDTRIAIEYGAAGIIMSNHGG---------RQLDY-- 262 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 +P +S E+ R G R G D+ K++ LGAS + P L Sbjct: 263 --------LPATISCLEEVVREANGRVPVFIDSGFRRGTDVFKALALGASGVFIGRPVLF 314 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+D V A+ LR E ++M L G V+E+ Sbjct: 315 SLAIDGEAGVRNALRMLRDELEITMALSGCTSVKEI 350 >gi|289625943|ref|ZP_06458897.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646852|ref|ZP_06478195.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868815|gb|EGH03524.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 446 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 209 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 268 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 316 Query: 277 IILGA 281 + LGA Sbjct: 317 MALGA 321 >gi|226361954|ref|YP_002779732.1| hypothetical protein ROP_25400 [Rhodococcus opacus B4] gi|226240439|dbj|BAH50787.1| hypothetical protein [Rhodococcus opacus B4] Length = 438 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L + + P+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAIKIIELREITNWEKPIYIK-VGATRTYYDVKLAVKAGADVVVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+R+G D+ K+ Sbjct: 263 Q-----------DVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRSGADVAKA 311 Query: 277 IILGA 281 + LGA Sbjct: 312 MALGA 316 >gi|323704724|ref|ZP_08116302.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536186|gb|EGB25959.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11] Length = 338 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 71/329 (21%), Positives = 126/329 (38%), Gaps = 61/329 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIERINRN 78 N K D W + + L ++ +++ S FLG ++ P+ ++ MTG GN Sbjct: 47 ENIKALDRWKVKLKTLHDVLKPDINTS--FLGFEVKMPVFVAPMTGLKGNAGGYLSEREY 104 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY------DF 132 I AE K + M D N ++ Y I + G + + + D Sbjct: 105 DMIVAEACKNVGTI----FMSGDAN-----DMDMYPAGIDAIKSTGVLGIPFSKPRTVDE 155 Query: 133 GVQKAHQA---------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 ++KA A V V GA GL + + Q + P ++ I L Sbjct: 156 IIEKAKIAKEAGAIAFGVDVDGA-GLIMMVRSGQ-FVGPKSRKEIETITKNIEL------ 207 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 PL+LK + +++ + + ++G + ++ GG D+ DI Sbjct: 208 -PLILKGI---MTTEEAVIAAEAGAKAIVVSNHGGRVLDYTMGTADVLPDI--------- 254 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 A+ ++ + GG+R G+D+LK + LGA + P + A +A+ Sbjct: 255 --------AKAVGDKIDVLVDGGVRTGIDVLKMLSLGAKAVLIGRPIMIAAHGGGREAIE 306 Query: 303 AAIESLRKEFIVSMFLLGT---KRVQELY 328 + + E +M L G K V E+Y Sbjct: 307 FYLNKVADELYQAMVLTGCKDLKNVPEVY 335 >gi|325673120|ref|ZP_08152814.1| (S)-mandelate dehydrogenase [Rhodococcus equi ATCC 33707] gi|325556373|gb|EGD26041.1| (S)-mandelate dehydrogenase [Rhodococcus equi ATCC 33707] Length = 406 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 +P+ +L +A A+ + GG+R G D+LK++ LGA + P L A+ Sbjct: 296 VPSVAALPAVADAVAGRAEVLLDGGIRRGTDVLKALALGADAVLVGRPCLYGMAVAGERG 355 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + LR+E + LLG + +Q+L Sbjct: 356 VEHVLTILREEIARGLTLLGVRDIQDL 382 >gi|167759413|ref|ZP_02431540.1| hypothetical protein CLOSCI_01760 [Clostridium scindens ATCC 35704] gi|167662970|gb|EDS07100.1| hypothetical protein CLOSCI_01760 [Clostridium scindens ATCC 35704] Length = 337 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 E+A N+ + + GG+R+GVDI K++ LGA + PF+ ++ V A L Sbjct: 253 EIADAVGNDMKILVDGGIRSGVDIFKALALGADAVLIGRPFVTAVYGGGAEGVAAYTAKL 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M + G + E+ Sbjct: 313 AAELEDTMAMCGAHSLSEI 331 >gi|116250213|ref|YP_766051.1| lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115254861|emb|CAK05935.1| putative lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 382 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRTEIERGMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VSQL 373 >gi|115460650|ref|NP_001053925.1| Os04g0623500 [Oryza sativa Japonica Group] gi|75326731|sp|Q7FAS1|GLO3_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=GOX 3; Short=OsGLO3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|317376201|sp|B8AUI3|GLO3_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=GOX 3; Short=OsGLO3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|38344169|emb|CAE03500.2| OSJNBa0053K19.8 [Oryza sativa Japonica Group] gi|113565496|dbj|BAF15839.1| Os04g0623500 [Oryza sativa Japonica Group] gi|116309753|emb|CAH66796.1| H0215F08.7 [Oryza sativa Indica Group] gi|215697011|dbj|BAG91005.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195616|gb|EEC78043.1| hypothetical protein OsI_17479 [Oryza sativa Indica Group] gi|222629584|gb|EEE61716.1| hypothetical protein OsJ_16217 [Oryza sativa Japonica Group] Length = 367 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 25/161 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + L + +P+L+K V +++ D L ++SG ++ G R L+ Sbjct: 215 TDVKWLQTITSLPILVKGV---MTAEDTRLAVESGAAGIIVSNHGA---------RQLDY 262 Query: 233 DIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P +S E+ R GG+R G D+ K++ LGAS + P Sbjct: 263 ----------VPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPV 312 Query: 291 L-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A+D V ++ LR E ++M L G + E+ N Sbjct: 313 LFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRN 353 >gi|320592437|gb|EFX04867.1| cytochrome mitochondrial precursor [Grosmannia clavigera kw1407] Length = 384 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 25/164 (15%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT----SWSR 223 F + + L + +P++LK + +S+ D + G++ ++ GG S S Sbjct: 228 FKNTWERYTQLQAQTSLPIVLKGI---MSAADARSAINHGVKAIILSNHGGRNLDGSPSS 284 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 +E ++ ++ VFQD + +A GG+R G D L+ + LG Sbjct: 285 LEVALEIHNNDPSVFQD------------------VEVLADGGIRYGTDALRLLSLGVKA 326 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ P + + V A+ L+ E + LG ++ + Sbjct: 327 VGIGRPIMFSNVFGEQGVTKAVGLLKNELLNDAANLGVADIKAI 370 >gi|312141622|ref|YP_004008958.1| fmn-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] gi|311890961|emb|CBH50280.1| putative FMN-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] Length = 406 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 +P+ +L +A A+ + GG+R G D+LK++ LGA + P L A+ Sbjct: 296 VPSVAALPAVADAVAGRAEVLLDGGIRRGTDVLKALALGADAVLVGRPCLYGMAVAGERG 355 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + LR+E + LLG + +Q+L Sbjct: 356 VEHVLTILREEIARGLTLLGVRDIQDL 382 >gi|260791281|ref|XP_002590668.1| hypothetical protein BRAFLDRAFT_89469 [Branchiostoma floridae] gi|229275864|gb|EEN46679.1| hypothetical protein BRAFLDRAFT_89469 [Branchiostoma floridae] Length = 347 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 25/136 (18%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LK V LS+ D +L + G++ ++ GG R+L+ G+ Sbjct: 226 LPVVLKGV---LSAEDAKLAVDRGVKGIYVSNHGG---------RELD----------GV 263 Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 P + + + R EA+ GG+R G D+LK++ LGA + P L A + ++ Sbjct: 264 PATIDVLPHIVRAVDGEAEVYLDGGVRTGTDVLKALALGARCVFIDRPVLWGLAHNGAEG 323 Query: 301 VVAAIESLRKEFIVSM 316 V ++ L +E +M Sbjct: 324 VQQVLQILTQELSQAM 339 >gi|312381090|gb|EFR26913.1| hypothetical protein AND_06682 [Anopheles darlingi] Length = 184 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ + + + GG+ G D+ K++ LGA + P + A+D V + ++ L Sbjct: 92 EIVKAVGDRVEVFLDGGITQGTDVFKALALGARMVFFGRPAVWGLAVDGQRGVESILDIL 151 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 RKE ++M L G + ++++ N Sbjct: 152 RKELDLTMALAGCRTIKDITSN 173 >gi|297538605|ref|YP_003674374.1| ferredoxin-dependent glutamate synthase [Methylotenera sp. 301] gi|297257952|gb|ADI29797.1| ferredoxin-dependent glutamate synthase [Methylotenera sp. 301] Length = 449 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 25/129 (19%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KIA L D P+ +K +G D+ L +K+G + G +GGT+ + Sbjct: 209 TGPDDLEIKIAELREITDWEKPIYVK-IGATRPYFDVALAVKAGADVIVLDGMQGGTAAT 267 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMA----------RPYCNEAQFIASGGLRNGVD 272 + + + GIP ++ A R + Q I SGG+RNG D Sbjct: 268 Q-----------EVFIEHVGIPILAAIRPAVKALQDLGVYRNGKDSVQLIVSGGIRNGAD 316 Query: 273 ILKSIILGA 281 + K+I LGA Sbjct: 317 VAKAIALGA 325 >gi|218511026|ref|ZP_03508904.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli Brasil 5] Length = 382 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETMRTEIERGMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDQL 373 >gi|261341785|ref|ZP_05969643.1| hypothetical protein ENTCAN_08267 [Enterobacter cancerogenus ATCC 35316] gi|288316156|gb|EFC55094.1| L-lactate dehydrogenase [cytochrome] [Enterobacter cancerogenus ATCC 35316] Length = 395 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L S A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|241202839|ref|YP_002973935.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856729|gb|ACS54396.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 382 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRTEIERGMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VSQL 373 >gi|291528855|emb|CBK94441.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Eubacterium rectale M104/1] Length = 340 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 64/332 (19%), Positives = 132/332 (39%), Gaps = 54/332 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLL---ISSMTGGNNKMIERI 75 D + +D W I + I+ ++ VD S+ G+ +P+ + ++ ++ + Sbjct: 43 DTAIRNYDKWKQIRVNMDTIAENKPVDTSLSLFGRTFKYPVFAGPVGAVQLHYGDCLDDV 102 Query: 76 NRN--LAIAAEKTKVAMAVGS---QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 N L A + +A G VM + NAIK+ + TV N+ ++ Sbjct: 103 TYNDILVSACAENGIAAFTGDGTDPNVMVAATNAIKNAD--GAGIPTVKPWNIETIR--- 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + + VH GA + + ++ L+ + P G+ ++L I + + P Sbjct: 158 -----EKMELVHESGAFAVAMDIDAAGLPFLKNLDPPAGSKTVSELCDIIQMAGT----P 208 Query: 186 LLLKEVGCGLSSMDIELGLKS---GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++K + M ++ LK+ G ++ GG + + ++ I + G Sbjct: 209 FIVKGI------MTVKGALKAKEAGASAIIVSNHGGRVLDQCPATAEVLESIVKALEGSG 262 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAV 301 I + + GG+R+G D+ K++ LGA +A PF+ +D V Sbjct: 263 I----------------KILVDGGIRSGTDVFKALALGADGVLIARPFVTAVYGGKADGV 306 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A I+ + E +M + G + E+ + + Sbjct: 307 RAYIDKIGTELEDTMKMCGVSSLDEITRDCVM 338 >gi|257486003|ref|ZP_05640044.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 405 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 168 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 226 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+RNG D+ K+ Sbjct: 227 Q-----------EVFIEHVGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGADVAKA 275 Query: 277 IILGA 281 + LGA Sbjct: 276 MALGA 280 >gi|218550883|ref|YP_002384674.1| L-lactate dehydrogenase [Escherichia fergusonii ATCC 35469] gi|259494984|sp|B7LTL2|LLDD_ESCF3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|218358424|emb|CAQ91071.1| L-lactate dehydrogenase, FMN-linked [Escherichia fergusonii ATCC 35469] gi|324111935|gb|EGC05915.1| FMN-dependent dehydrogenase [Escherichia fergusonii B253] Length = 396 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|309774726|ref|ZP_07669749.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 3_1_53] gi|308917499|gb|EFP63216.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 3_1_53] Length = 341 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 24/184 (13%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 L L+ I P G N +L + DVP +LK + LS L++G Sbjct: 180 LTNLRTSITPVGFKNVEELKEITKICG---DVPFILKGI---LSVKGARKALEAGASGII 233 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S ++ DI V + G R G D Sbjct: 234 VSNHGGRVLDDCMSGIEVLEDIVKVAD-----------------GRMKVFVDGAFRTGND 276 Query: 273 ILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGA + P + + D SD +V E +R E +M + G K +Q++ + Sbjct: 277 VFKALALGADGVLIGRPVSQAVIGDGSDGLVTYFEKIRLELKEAMAMAGCKTIQDITRDC 336 Query: 332 ALIR 335 ++ Sbjct: 337 VSVK 340 >gi|118588196|ref|ZP_01545605.1| ferredoxin-dependent glutamate synthase [Stappia aggregata IAM 12614] gi|118438902|gb|EAV45534.1| ferredoxin-dependent glutamate synthase [Stappia aggregata IAM 12614] Length = 536 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 30/245 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA-IKSFELRQ 112 KL PLL+S M+ G + E LA A+ + G ++ + A + F Sbjct: 205 KLKIPLLVSDMSFG--ALSEPAKIALARGADLAGTGICSGEGGMLPEEQQANSRYFYELA 262 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAV--HVLGAD--GLFLHLNPLQEIIQPNGNTNF 168 A L VQ + G Q A H+ GA G + L+E F Sbjct: 263 SARFGFAWDKLDKVQAFHFKGGQGAKTGTGGHLPGAKVKGKIAEVRGLKEGEDAISPPRF 322 Query: 169 ADLSSKIALLSSAMDVPLLLK--EVGCGLSSM----DIELGLKSGIRYFDIAGRGGTSWS 222 D + + + A +V +G LS+ DI+ L+ G+ Y + GRGG + + Sbjct: 323 PDWTERSQIKDFADEVRTRTGGIPIGYKLSAQHIEKDIDAALEVGVDYIILDGRGGGTGA 382 Query: 223 RIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCNEAQ-----FIASGGLRNGVDILKS 276 I+F+D +PT +L AR + + ++ I +GGLR D +K+ Sbjct: 383 -----------APIIFRDNISVPTIPALARARRHLDASRRPDVTLIITGGLRKPADFIKA 431 Query: 277 IILGA 281 + LGA Sbjct: 432 LALGA 436 >gi|303327584|ref|ZP_07358025.1| dehydrogenase, FMN-dependent family [Desulfovibrio sp. 3_1_syn3] gi|302862524|gb|EFL85457.1| dehydrogenase, FMN-dependent family [Desulfovibrio sp. 3_1_syn3] Length = 338 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 71/312 (22%), Positives = 120/312 (38%), Gaps = 41/312 (13%) Query: 23 KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERINR 77 +K LIH E+ E + E LG LS P+LI+ + G GN ER + Sbjct: 53 EKICLKMRLIH----EVRAPET--ACEVLGLSLSMPVLIAPLAGTTFNMGNGLPEERFAQ 106 Query: 78 NLAIAAEK--TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 + A T G+ V S NA+++ E + + A + ++ + Sbjct: 107 VVTEGARSAGTISCTGDGTSEVFGSGLNAVQAAE-----GWGIPVIKPWAGEAFFERLER 161 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 A V+G D + L + +P + A+LS+ I + A+ + LLK V L Sbjct: 162 AAQAGCRVVGMDIDTAAITALAKSKRPVSPKSRAELSA-IVEKAHALGLKFLLKGV---L 217 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D + G ++ GG ++ + T +L Sbjct: 218 SVEDALAAEECGCDAIVVSNHGGRAFEAVPG------------------TAAALPAIAQS 259 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIV 314 + GG+R G D+LK + LGA+ + P + AM + V + ++++ Sbjct: 260 VRRMTVLVDGGVRAGADVLKMLALGAAAVLIGRPAIIAAMGGEEEGVRMLLTRMQRQLEE 319 Query: 315 SMFLLGTKRVQE 326 SM L G V+E Sbjct: 320 SMLLTGCASVRE 331 >gi|325499154|gb|EGC97013.1| L-lactate dehydrogenase [Escherichia fergusonii ECD227] Length = 396 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|295701044|ref|YP_003608937.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1002] gi|295440257|gb|ADG19426.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1002] Length = 381 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 I GG++ G +LK++ LGA G+ +L P + A V A+ +R E + M L+G Sbjct: 307 IMDGGVQRGTHVLKALALGAKAVGVGRYYLFPLAAAGQAGVERALALMRTELVRGMKLMG 366 Query: 321 TKRVQEL 327 V EL Sbjct: 367 CTSVSEL 373 >gi|257466180|ref|ZP_05630491.1| FMN-dependent family dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|315917338|ref|ZP_07913578.1| dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|313691213|gb|EFS28048.1| dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 340 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 66/323 (20%), Positives = 130/323 (40%), Gaps = 48/323 (14%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDP--SVEFLGKKLSFPLLISSMTG-----GNNKMIER 74 N + HL R L + DP +++ G+ LS P+L + +TG G E Sbjct: 48 NYTSLKNIHLQMRCLHKAK----DPKTTLQLFGQNLSMPILGAPITGPKFNFGGYVNQEE 103 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + A+ T +G + IKS L++ + I ++ Y+ + Sbjct: 104 FCDDIILGAKATGTLAMIGDTGDPTAYEAGIKS--LKKANGFGIAI-----IKPRYNEEI 156 Query: 135 QKAHQAVHVLGADGLFLHLN-----PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 K + GA + + L+ ++ QP + DL L ++ ++P ++K Sbjct: 157 IKRIRIAEEAGAIAVGIDLDGAGLLTMKLFNQPVEPKSMEDLKE----LVNSTNLPFIVK 212 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + LS D + +++GI ++ GG V D P + Sbjct: 213 GI---LSVEDAKACVEAGIDAIVVSNHGGR-----------------VLDDCISPVEVLQ 252 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 ++ N+ + G +R+G D+LK + LGA + P + ++ + + + +SL Sbjct: 253 DIVEAVGNQIIVLVDGNVRSGEDVLKYLALGARAVLIGRPCIWASVGNRQEGMETLFQSL 312 Query: 309 RKEFIVSMFLLGTKRVQELYLNT 331 + + +M + G VQE+ NT Sbjct: 313 QSQLYKAMLMTGNHSVQEISPNT 335 >gi|157106990|ref|XP_001649576.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] gi|108879712|gb|EAT43937.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] Length = 364 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ + + + GG+ G D+ K+I LGA + P L A++ V ++ L Sbjct: 272 EIVKAVGDRTTIVMDGGVTEGTDVFKAIALGAKMVFFGRPALWGLAVNGQQGVEHVLDLL 331 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 RKE V+M L G + + ++ N Sbjct: 332 RKELDVAMALAGCQTIGDITPN 353 >gi|317407518|gb|EFV87472.1| L-lactate dehydrogenase [Achromobacter xylosoxidans C54] Length = 381 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E +R E +M L+G + Sbjct: 310 GGVQRGTHVLKALALGAKAVGLGRYYLFPLAAAGRPGVERALEQMRVEIERAMKLMGCRT 369 Query: 324 VQEL 327 V +L Sbjct: 370 VGQL 373 >gi|158423124|ref|YP_001524416.1| glutamate synthase family protein [Azorhizobium caulinodans ORS 571] gi|158330013|dbj|BAF87498.1| glutamate synthase family protein [Azorhizobium caulinodans ORS 571] Length = 444 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 27/128 (21%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KI L D P+ +K VG DI L +KSG + G +GGT+ + Sbjct: 208 TGPDDLEIKIEELRELTDWEKPIYVK-VGASRPYYDISLAVKSGADVVVLDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIP L RP + Q I SGG+RNG D+ Sbjct: 267 Q-----------DVFIEHVGIPI---LAAIRPAVQALKDLGMHRKVQLIVSGGIRNGADV 312 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 313 AKALALGA 320 >gi|254459503|ref|ZP_05072919.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206676092|gb|EDZ40579.1| L-lactate dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 387 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ +GA + F+ AM + V A+E + KE SM L G + Sbjct: 308 GGIRSGQDVLKALAMGAKGTYIGRAFIYGLGAMGQA-GVTKALEVIHKELDTSMALCGKR 366 Query: 323 RVQELYLNTALI 334 V EL N AL+ Sbjct: 367 NVGEL-TNDALM 377 >gi|39957328|ref|XP_364317.1| hypothetical protein MGG_09162 [Magnaporthe oryzae 70-15] gi|149210999|ref|XP_001522874.1| hypothetical protein MGCH7_ch7g962 [Magnaporthe oryzae 70-15] gi|86196917|gb|EAQ71555.1| hypothetical protein MGCH7_ch7g962 [Magnaporthe oryzae 70-15] gi|145016999|gb|EDK01362.1| hypothetical protein MGG_09162 [Magnaporthe oryzae 70-15] Length = 383 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 245 TPLSLEMARPYCNEA-------QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 +P SLE+A EA + +A GG+R G D L+ + LG G+ P + + Sbjct: 280 SPSSLEIALEIHREAPEIFEQIEVLADGGVRYGTDALRLLALGVKAVGIGRPMMYSNVFG 339 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V A+E R E LG ++++ Sbjct: 340 VDGVKRAVEIFRNELTNDAANLGVADIKKI 369 >gi|85089526|ref|XP_957990.1| hypothetical protein NCU07362 [Neurospora crassa OR74A] gi|28919290|gb|EAA28754.1| hypothetical protein NCU07362 [Neurospora crassa OR74A] Length = 520 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 R YC E + GG++ G D++K++ LGA G+ L V + Sbjct: 408 RKYCPEVFGAVEVWIDGGVKRGTDVVKALCLGAKAVGVGRAALWGLGAGGWQGVERTFDI 467 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNT 331 L++E I M LLG K V +L ++NT Sbjct: 468 LQQEIITCMKLLGAKTVNDLGPRFINT 494 >gi|302922632|ref|XP_003053507.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256734448|gb|EEU47794.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 488 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 255 YCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLR 309 YC E + GG++ G D++K++ LGAS G+ L A V + E L Sbjct: 379 YCPEVFSKIEVWVDGGIKRGTDVVKALCLGASAVGIGRGALFGLGAGGQAGVERVLEILE 438 Query: 310 KEFIVSMFLLGTKRVQEL 327 E M LLG K + EL Sbjct: 439 AETATCMRLLGAKNISEL 456 >gi|215427225|ref|ZP_03425144.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T92] gi|289750452|ref|ZP_06509830.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T92] gi|289691039|gb|EFD58468.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T92] Length = 414 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +GVDI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGVDIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|2385388|emb|CAA04759.1| L-mandelate dehydrogenase [Rhodotorula graminis] Length = 491 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 40/260 (15%) Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + IA EK K A+A+G++ + + + R L A NY+ + Sbjct: 249 VHSDKKIAEEKLKRALALGAKAIFVTVDVPVLGKRERDL--------KLKARSQNYEHPI 300 Query: 135 QKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 +A + + ++ + + + N N+ D++ + A VP+++K VGC Sbjct: 301 AAQWKAAGSKVEETIAKRGVSDIPDTAHIDANLNWDDIAW---IKERAPGVPIVIKGVGC 357 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS--LEM 251 D+EL + G ++ G R L+ G PL +E+ Sbjct: 358 ---VEDVELAKQYGADGVVLSTHGA---------RQLD----------GARAPLDVLIEV 395 Query: 252 ARP---YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIES 307 R E + G R G D+LK++ LGA G FL + +D V AI Sbjct: 396 RRKNPALLKEIEVYVDGQARRGTDVLKALCLGARGVGFGRGFLYAQSAYGADGVDKAIRI 455 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L E +M LLG + +L Sbjct: 456 LENEIQNAMRLLGANTLADL 475 >gi|296100531|ref|YP_003610677.1| L-lactate dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054990|gb|ADF59728.1| L-lactate dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 395 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L S A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTIGEI 370 >gi|327189427|gb|EGE56591.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 382 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETMRTEIERGMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDQL 373 >gi|325673888|ref|ZP_08153578.1| glutamate synthase beta subunit [Rhodococcus equi ATCC 33707] gi|325555153|gb|EGD24825.1| glutamate synthase beta subunit [Rhodococcus equi ATCC 33707] Length = 441 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 24/128 (18%) Query: 166 TNFADLSSKIALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L + + P+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAIKIIELREITGWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE---------AQFIASGGLRNGVDI 273 + + + GIPT ++ A E Q + SGG+R+G D+ Sbjct: 263 Q-----------DVFIEHVGIPTLAAIPQAAQALQELGVHRTPGGVQLVVSGGIRSGADV 311 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 312 AKAMALGA 319 >gi|238608583|ref|XP_002397271.1| hypothetical protein MPER_02335 [Moniliophthora perniciosa FA553] gi|215471384|gb|EEB98201.1| hypothetical protein MPER_02335 [Moniliophthora perniciosa FA553] Length = 232 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + +A GG+R G D LK + LG G+ PF+ + D VV A + L++E + L Sbjct: 151 RILADGGVRYGTDALKLLALGVKAVGVGRPFMYSNVFGVDGVVHAAKILKREIATNAGNL 210 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 211 GVADLKKI 218 >gi|109092849|ref|XP_001116000.1| PREDICTED: hydroxyacid oxidase 1-like [Macaca mulatta] Length = 370 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|255642603|gb|ACU21609.1| unknown [Glycine max] Length = 348 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA+ + P + A D V ++ LR EF ++M L G + Sbjct: 267 GGIRRGTDVFKALALGAAGVFIGRPVVFSLAADGETGVRKVLQMLRDEFELTMALSGCRS 326 Query: 324 VQEL 327 ++E+ Sbjct: 327 LKEI 330 >gi|212633837|ref|YP_002310362.1| glutamate synthase domain-containing protein [Shewanella piezotolerans WP3] gi|212555321|gb|ACJ27775.1| Glutamate synthase domain protein [Shewanella piezotolerans WP3] Length = 514 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 333 DIQFALDASADYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARKYLDQ 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 I +GGLR +D +K++ LGA Sbjct: 383 QGASGRVTLIITGGLRVPIDFVKALALGA 411 >gi|326469882|gb|EGD93891.1| glycolate oxidase [Trichophyton tonsurans CBS 112818] Length = 492 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G+R G DILK++ LGA+ G+ FL + + I+ +R E +M +G + Sbjct: 396 GIRRGTDILKAVCLGATAVGMGRSFLFVSNYGQEGAEHLIDIMRDELEGAMRNIGITSLD 455 Query: 326 EL---YLNTALIRH 336 + Y+NTA I H Sbjct: 456 QAGPQYINTADIDH 469 >gi|257455063|ref|ZP_05620306.1| L-lactate dehydrogenase [Enhydrobacter aerosaccus SK60] gi|257447535|gb|EEV22535.1| L-lactate dehydrogenase [Enhydrobacter aerosaccus SK60] Length = 382 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + + G+RNG+D+++ + LGA L L F+ A D V + + KE V+M Sbjct: 300 DIKILVDSGIRNGLDVVRMLALGADLCMLGRAFVYALAADGEAGVTNLLNLIDKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L R+Q++ Sbjct: 360 TLTSANRIQDI 370 >gi|1063400|emb|CAA63482.1| glycolate oxidase [Solanum lycopersicum] Length = 290 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 206 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVKKVLQMLRDEFELTMALSGCRS 265 Query: 324 VQELYLN 330 ++E+ N Sbjct: 266 LKEITRN 272 >gi|108805300|ref|YP_645237.1| glutamate synthase (NADPH) GltB2 subunit [Rubrobacter xylanophilus DSM 9941] gi|108766543|gb|ABG05425.1| glutamate synthase (NADPH) GltB2 subunit [Rubrobacter xylanophilus DSM 9941] Length = 460 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D +P+ +K G D++L +K+G + G +GGT+ + Sbjct: 214 TGSDDLTIKIEELREITDWEIPIYVK-FGATRVKDDVKLAVKAGADVVVVDGMQGGTAAT 272 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT ++ A E Q I SGG+R G D+ K+ Sbjct: 273 Q-----------DVFIEHAGIPTLAAITQAVEALEEMDVKGKVQLIISGGIRTGADVAKA 321 Query: 277 IILGA 281 + LGA Sbjct: 322 LALGA 326 >gi|262277867|ref|ZP_06055660.1| L-lactate dehydrogenase (cytochrome) [alpha proteobacterium HIMB114] gi|262224970|gb|EEY75429.1| L-lactate dehydrogenase (cytochrome) [alpha proteobacterium HIMB114] Length = 382 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + I GG+R G +LK++ LGA + +L V ++ ++ E Sbjct: 303 DKIEIILDGGIRRGTHVLKALALGAKACSMGKAYLYALGAGGQPGVERVLQKMKDEITRG 362 Query: 316 MFLLGTKRVQEL 327 M L+GT+ V EL Sbjct: 363 MTLMGTRNVNEL 374 >gi|188586641|ref|YP_001918186.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351328|gb|ACB85598.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 336 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 E+A E + GG+R+G+D+LK + LGA + P L D ++ V +E + Sbjct: 252 EIAEKVKGEIVIMVDGGIRSGIDVLKVLALGAEFVLVGRPVLHGVFADYNNGVSTVLEQM 311 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M L G V+ + Sbjct: 312 TSELRRTMMLTGCAHVKAI 330 >gi|149639717|ref|XP_001515351.1| PREDICTED: similar to phosphodiesterase 11A [Ornithorhynchus anatinus] Length = 961 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA LSSK D+ LLK+ + + D+ L + +F Sbjct: 668 HFNHAVMILQSEGHNIFAKLSSK-----DYSDLMQLLKQ---SILATDLTLYFERRTEFF 719 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G +W+ ++ HRD+ D+G V + W I Sbjct: 720 ELVQKGNYNWN-LQQHRDIFRSMLMTACDLGAVTKPWEI 757 >gi|312141278|ref|YP_004008614.1| ferredoxin-dependent glutamate synthase [Rhodococcus equi 103S] gi|311890617|emb|CBH49935.1| ferredoxin-dependent glutamate synthase [Rhodococcus equi 103S] Length = 441 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 24/128 (18%) Query: 166 TNFADLSSKIALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L + + P+ +K VG + D++L +K+G + G +GGT+ + Sbjct: 204 TGPDDLAIKIIELREITGWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE---------AQFIASGGLRNGVDI 273 + + + GIPT ++ A E Q + SGG+R+G D+ Sbjct: 263 Q-----------DVFIEHVGIPTLAAIPQAAQALQELGVHRTPGGVQLVVSGGIRSGADV 311 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 312 AKAMALGA 319 >gi|304312691|ref|YP_003812289.1| L-lactate dehydrogenase [gamma proteobacterium HdN1] gi|301798424|emb|CBL46649.1| L-lactate dehydrogenase [gamma proteobacterium HdN1] Length = 386 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G+D+LK++ LGA + P+ A V A + + E ++M L G R Sbjct: 315 GGVRSGIDLLKALALGAQGALIGRPWAWSLAAQGQLGVEALLRDFQTELSIAMALCGVSR 374 Query: 324 VQEL 327 ++E+ Sbjct: 375 IEEI 378 >gi|295098729|emb|CBK87819.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 395 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L S A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTIGEI 370 >gi|145332395|ref|NP_001078154.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332642001|gb|AEE75522.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 360 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 279 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 338 Query: 324 VQELYLN 330 ++E+ N Sbjct: 339 LKEISRN 345 >gi|159043500|ref|YP_001532294.1| L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157911260|gb|ABV92693.1| L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 390 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%) Query: 266 GLRNGVDILKSIILGA--SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA ++ G A + AM + V A+E + KE +SM L G + Sbjct: 309 GIRSGQDVLKAVALGARGTMIGRAWTYGLGAMGEA-GVTRALEVIHKELDLSMGLCGRRS 367 Query: 324 VQELYLNTALI 334 V++L + LI Sbjct: 368 VEDLDASNLLI 378 >gi|320352843|ref|YP_004194182.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfobulbus propionicus DSM 2032] gi|320121345|gb|ADW16891.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfobulbus propionicus DSM 2032] Length = 340 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 56/306 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGN----NKMIER--INRNLAIAAEKTKVAMAV- 92 S E D S+ G+KLS P+L + +TG + KM E I +A A + + M Sbjct: 64 SVKEPDMSLTLWGRKLSMPILGAPITGSSYNMGGKMTEEEFIAEMVAGAIQAGTLCMTGD 123 Query: 93 GSQRVMFSD------HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 G+ MF N S + + V++ +L +A +A VL Sbjct: 124 GADPRMFDSGLKAGADNKGGSIAIIKPRAQDVVVGHL------------RAAEATGVLAT 171 Query: 147 ----DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 DG L ++ QP G +L I +A +P ++K V +++ + E Sbjct: 172 GMDIDGAGLVTMAMKG--QPVGPKTATELREVI----NATKLPFIVKGV---MTADEAEE 222 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +++G ++ GG R+ +++ +P +A +A Sbjct: 223 AVQAGAAAIVVSNHGG----RVLDFTPGAAEV--------LPA-----IAARVKGKAIIF 265 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 A GG+R+G D+LK + LGA + P + A + V + L+ E + +M L GT Sbjct: 266 ADGGVRSGADVLKLLALGADAVLVGRPLVIAAFGGGREGVALYLNQLKGELLQAMLLTGT 325 Query: 322 KRVQEL 327 V+++ Sbjct: 326 ADVKQV 331 >gi|122921242|pdb|2NZL|A Chain A, Crystal Structure Of Human Hydroxyacid Oxidase 1 Length = 392 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 289 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGE 348 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 349 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 384 >gi|220914258|ref|YP_002489567.1| ferredoxin-dependent glutamate synthase [Arthrobacter chlorophenolicus A6] gi|219861136|gb|ACL41478.1| ferredoxin-dependent glutamate synthase [Arthrobacter chlorophenolicus A6] Length = 458 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL KI L + P+ +K +G D L +KSG + G +GGT+ ++ Sbjct: 225 DLEIKIGELREITGWKTPIYVK-IGASRPYYDTALAVKSGADVVVVDGMQGGTAATQ--- 280 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILG 280 + ++ GIPT ++ A E Q I SGG+R G D+ K++ LG Sbjct: 281 --------QVFIENVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRTGADVAKAMALG 332 Query: 281 A 281 A Sbjct: 333 A 333 >gi|315498313|ref|YP_004087117.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] gi|315416325|gb|ADU12966.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] Length = 365 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R G D+ K++ LGAS + P+++ A V AI +LR+E V M L GT Sbjct: 295 GGIRRGSDVFKALALGASAVLVGRPYVQALAAAGPLGVAHAIRTLREELEVVMALSGT 352 >gi|218195617|gb|EEC78044.1| hypothetical protein OsI_17480 [Oryza sativa Indica Group] Length = 285 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLL 319 FI SG R G D+ K++ LGAS + P L A+D V A+ LR E ++M L Sbjct: 201 FIDSG-FRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLRDELEITMALS 259 Query: 320 GTKRVQEL 327 G V+E+ Sbjct: 260 GCTSVKEI 267 >gi|291524823|emb|CBK90410.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Eubacterium rectale DSM 17629] Length = 340 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 64/326 (19%), Positives = 127/326 (38%), Gaps = 54/326 (16%) Query: 26 FDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLL---ISSMTGGNNKMIERINRN--L 79 +D W I + I+ ++ VD S+ G+ +P+ + ++ ++ + N L Sbjct: 49 YDKWKQIRVNMDTIAENKPVDTSLSLFGRTFKYPVFAGPVGAVQLHYGDCLDDVTYNDIL 108 Query: 80 AIAAEKTKVAMAVGS---QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A K +A G VM + AIK+ TV N+ ++ + Sbjct: 109 VSACAKNGIAAFTGDGTDPNVMVAATKAIKN--ANGAGIPTVKPWNIETIREKMEL---- 162 Query: 137 AHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 VH GA + + ++ L+ + P G+ ++L I + + P ++K + Sbjct: 163 ----VHESGAFAVAMDIDAAGLPFLKNLDPPAGSKTVSELCDIIQMAGT----PFIVKGI 214 Query: 192 GCGLSSMDIELGLKS---GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 M ++ LK+ G ++ GG + S ++ I + GI Sbjct: 215 ------MTVKGALKAKEAGASAIIVSNHGGRVLDQCPSTAEVLESIVKALEGSGI----- 263 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIES 307 + + GG+R+G D+ K++ LGA +A PF+ +D V A I+ Sbjct: 264 -----------KILVDGGIRSGTDVFKALALGADGVLIARPFVTAVYGGKADGVRAYIDK 312 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTAL 333 + E +M + G + E+ + + Sbjct: 313 IGTELEDTMKMCGVSSLDEITRDCVM 338 >gi|261252026|ref|ZP_05944600.1| glutamate synthase [NADPH] large chain [Vibrio orientalis CIP 102891] gi|260938899|gb|EEX94887.1| glutamate synthase [NADPH] large chain [Vibrio orientalis CIP 102891] Length = 517 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 93/256 (36%), Gaps = 51/256 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PL +S M+ G + E +LA AE + G ++ + A + Sbjct: 180 KLNIPLFVSDMSFG--ALSEEAKVSLAKGAELAGTGICSGEGGMLPEEQAANSRY----- 232 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HL---NPLQEIIQPNG-- 164 L + YD K QA H G G HL + +I Q G Sbjct: 233 ------FYELASAGFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGAKNIGKIAQVRGIE 286 Query: 165 -------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 F DL++ A V + + G DI+ L + Y Sbjct: 287 AGTAAISPPTFKDLTTTEDFKQFANRVREVTGGIPIGFKLSANHIEEDIQFALDASADYI 346 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + E RD S +PT +L AR Y ++ I +G Sbjct: 347 ILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKVGASGRVTLIITG 396 Query: 266 GLRNGVDILKSIILGA 281 GLR +D +K++ LGA Sbjct: 397 GLRVPMDFVKAMALGA 412 >gi|260786697|ref|XP_002588393.1| hypothetical protein BRAFLDRAFT_199062 [Branchiostoma floridae] gi|229273555|gb|EEN44404.1| hypothetical protein BRAFLDRAFT_199062 [Branchiostoma floridae] Length = 302 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 23/140 (16%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI-GIVFQDWG 242 +P++LK + LS+ D + + G+ ++ GG + + D+ DI G V Sbjct: 184 LPVVLKGI---LSAEDARIAVDLGVAGIYVSNHGGRQQDGVPATIDVLPDIVGAV----- 235 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 EA+ GG+R G D+LK++ LGA + P L A++ ++ V Sbjct: 236 -------------GGEAEVYLDGGVRTGTDVLKALALGARCVFIGRPALWGLALNGAEGV 282 Query: 302 VAAIESLRKEFIVSMFLLGT 321 ++ L+ E ++M GT Sbjct: 283 EEVLQVLKHELSIAMARAGT 302 >gi|168988712|pdb|2RDT|A Chain A, Crystal Structure Of Human Glycolate Oxidase (Go) In Complex With Cdst gi|168988713|pdb|2RDU|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With Glyoxylate gi|168988714|pdb|2RDW|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With Sulfate Length = 387 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 284 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGE 343 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 344 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVR 378 >gi|260786701|ref|XP_002588395.1| hypothetical protein BRAFLDRAFT_198995 [Branchiostoma floridae] gi|229273557|gb|EEN44406.1| hypothetical protein BRAFLDRAFT_198995 [Branchiostoma floridae] Length = 297 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A + + +P++LK + LS+ D + + G+ ++ GG + + D+ DI Sbjct: 170 VAWIKNNTRLPVVLKGI---LSAEDARIAVDLGVAGIYVSNHGGRQQDGVPATIDVLPDI 226 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 EA+ GG+R G D+LK++ LGA + P L Sbjct: 227 -----------------VSAVGGEAEVYLDGGVRTGTDVLKALALGARCVFIGRPALWGL 269 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A++ ++ V ++ L+ E ++M GT Sbjct: 270 ALNGAEGVQQVLQILKDELSLAMARAGT 297 >gi|11068137|ref|NP_060015.1| hydroxyacid oxidase 1 [Homo sapiens] gi|114680883|ref|XP_001167611.1| PREDICTED: hydroxyacid oxidase 1 [Pan troglodytes] gi|13124294|sp|Q9UJM8|HAOX1_HUMAN RecName: Full=Hydroxyacid oxidase 1; Short=HAOX1; AltName: Full=Glycolate oxidase; Short=GOX gi|266618461|pdb|2W0U|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618462|pdb|2W0U|B Chain B, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618463|pdb|2W0U|C Chain C, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618464|pdb|2W0U|D Chain D, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|7208436|gb|AAF40199.1|AF231916_1 short chain 2-hydroxy acid oxidase HAOX1 [Homo sapiens] gi|6012997|emb|CAB57329.1| hypothetical protein [Homo sapiens] gi|7530485|gb|AAF63219.1| glycolate oxidase [Homo sapiens] gi|13276216|emb|CAC34364.1| hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|109730585|gb|AAI13666.1| Hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|109731784|gb|AAI13668.1| Hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|119630784|gb|EAX10379.1| hydroxyacid oxidase (glycolate oxidase) 1, isoform CRA_a [Homo sapiens] gi|119630785|gb|EAX10380.1| hydroxyacid oxidase (glycolate oxidase) 1, isoform CRA_a [Homo sapiens] gi|158259869|dbj|BAF82112.1| unnamed protein product [Homo sapiens] gi|189054064|dbj|BAG36571.1| unnamed protein product [Homo sapiens] gi|313882960|gb|ADR82966.1| hydroxyacid oxidase (glycolate oxidase) 1 [synthetic construct] Length = 370 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|253583823|ref|ZP_04861021.1| dehydrogenase [Fusobacterium varium ATCC 27725] gi|251834395|gb|EES62958.1| dehydrogenase [Fusobacterium varium ATCC 27725] Length = 338 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 63/305 (20%), Positives = 122/305 (40%), Gaps = 56/305 (18%) Query: 42 DEVDP--SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D +P + + GK+LSFP L + +TG + N + E+ + + G+ Sbjct: 64 DATEPILTTKLWGKELSFPCLGAPITG------TKFNMGGGVTEEEYCLDVIGGA----- 112 Query: 100 SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV---------------QKAHQAVHV- 143 D I + + + L A++ N GV + A +A + Sbjct: 113 IDAGTIGM--IGDTGDASCYTAGLEAIKTNGGMGVAIIKPRSNDEIIKRIRLAEEAGAIA 170 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +G D L ++ QP G +FA+L L+++ +P ++K + LS + +L Sbjct: 171 VGVDVDGAGLITMKLFGQPVGPKSFAELKE----LAASTKLPFIVKGI---LSVDEAKLC 223 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +++G+ ++ GG V + P + ++ + ++ + Sbjct: 224 VEAGVDTIVVSNHGGR-----------------VLNETLAPCEVIEDIVKAVGDKINVLV 266 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTK 322 G +R GVDILK + LGA + P ++ V I E+L+ + +M L G K Sbjct: 267 DGSVREGVDILKYMALGAKGVLVGRPLTWGSIGGRQEGVKTIFENLKGQLTQAMILTGVK 326 Query: 323 RVQEL 327 + + Sbjct: 327 DINRI 331 >gi|126326672|ref|XP_001377285.1| PREDICTED: similar to phosphodiesterase 11A [Monodelphis domestica] Length = 940 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + DI L + +F Sbjct: 742 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDITLYFERRTEFF 793 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G +W+ +++ RD+ D+G V + W I Sbjct: 794 ELVSKGDYNWN-VKNQRDIFRSMLMTACDLGAVTKPWEI 831 >gi|21618144|gb|AAM67194.1| glycolate oxidase, putative [Arabidopsis thaliana] Length = 363 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V I+ L+ EF ++M L G Sbjct: 284 GGVRRGTDVFKALALGAQAVLIGRPMIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPT 343 Query: 324 VQELYLN 330 + ++ N Sbjct: 344 IDDITRN 350 >gi|15231792|ref|NP_188031.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|145332391|ref|NP_001078152.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|122195548|sp|Q24JJ8|GLO3_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=AtGLO3; Short=GOX 3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|90093298|gb|ABD85162.1| At3g14150 [Arabidopsis thaliana] gi|332641956|gb|AEE75477.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] gi|332641957|gb|AEE75478.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] Length = 363 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V I+ L+ EF ++M L G Sbjct: 284 GGVRRGTDVFKALALGAQAVLIGRPIIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPT 343 Query: 324 VQELYLN 330 + ++ N Sbjct: 344 IDDITRN 350 >gi|326389188|ref|ZP_08210764.1| glutamate synthase family protein [Novosphingobium nitrogenifigens DSM 19370] gi|326206331|gb|EGD57172.1| glutamate synthase family protein [Novosphingobium nitrogenifigens DSM 19370] Length = 347 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 27/128 (21%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KI L D P+ +K VG D+ L +KSG + G +GGT+ + Sbjct: 112 TGPDDLEIKIEELREITDWEKPIYVK-VGATRPYYDVALAVKSGADVVVLDGMQGGTAAT 170 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIP L RP + Q I SGG+RNG D+ Sbjct: 171 Q-----------DVFIEHVGIPI---LSAIRPAVQALQDLGMHRKVQLIVSGGIRNGADV 216 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 217 AKALALGA 224 >gi|319764083|ref|YP_004128020.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] gi|317118644|gb|ADV01133.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] Length = 383 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLR 309 +AR +A+ + GG+R GVD+ K++ LGA + P++ A V + + Sbjct: 297 IARAVGAQAEVLVDGGVRGGVDVFKALALGARGVLVGRPWVWALAAQGEAGVRTLLAQWQ 356 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E +++M L G R ++ Sbjct: 357 RELLLAMTLAGVPRTADI 374 >gi|9294640|dbj|BAB02979.1| glycolate oxidase [Arabidopsis thaliana] Length = 365 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V I+ L+ EF ++M L G Sbjct: 286 GGVRRGTDVFKALALGAQAVLIGRPIIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPT 345 Query: 324 VQELYLN 330 + ++ N Sbjct: 346 IDDITRN 352 >gi|297706329|ref|XP_002829994.1| PREDICTED: hydroxyacid oxidase 1-like [Pongo abelii] Length = 370 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|291228833|ref|XP_002734382.1| PREDICTED: hydroxyacid oxidase 2-like [Saccoglossus kowalevskii] Length = 366 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+++ ++ + GG+R G D+LK++ LGA + P + A Sbjct: 264 GVPATIDVLAEISKAVGDKIEVYMDGGVRTGTDVLKALALGARAVFIGRPVIYGLAYKGE 323 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V ++ L+ E ++M L G + ++++ Sbjct: 324 EGVKNVLQILKDELSLAMALSGCRTIKDI 352 >gi|255320376|ref|ZP_05361560.1| L-lactate dehydrogenase [Acinetobacter radioresistens SK82] gi|262379342|ref|ZP_06072498.1| L-lactate oxidase [Acinetobacter radioresistens SH164] gi|255302571|gb|EET81804.1| L-lactate dehydrogenase [Acinetobacter radioresistens SK82] gi|262298799|gb|EEY86712.1| L-lactate oxidase [Acinetobacter radioresistens SH164] Length = 381 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + + G+RNG+D+++ I LGA L L F+ + V +E + KE V+M L Sbjct: 302 KIMVDSGVRNGLDVVRMIALGADLCLLGRAFVYALGAAGGEGVNHLLELINKEMRVAMTL 361 Query: 319 LGTKRVQEL 327 G K +Q++ Sbjct: 362 TGAKTIQDI 370 >gi|16226772|gb|AAL16258.1|AF428328_1 AT3g14420/MOA2_2 [Arabidopsis thaliana] Length = 367 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 ++E+ N Sbjct: 346 LKEISRN 352 >gi|145332397|ref|NP_001078155.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332642002|gb|AEE75523.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 366 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 285 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 344 Query: 324 VQELYLN 330 ++E+ N Sbjct: 345 LKEISRN 351 >gi|46121219|ref|XP_385164.1| hypothetical protein FG04988.1 [Gibberella zeae PH-1] Length = 412 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG G DILK+I LGA+ G+A PFL + V + L+ E SM L G Sbjct: 317 GGFERGSDILKAIALGATAVGIARPFLYSLVYGQKGVEHLSQILKDELETSMRLAG 372 >gi|209546547|ref|YP_002278465.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537791|gb|ACI57725.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 395 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKR 323 GG R G DI+K++ LGA + PFL A + V+ A + L+ E +M LLG Sbjct: 324 GGFRRGTDIIKALALGARFVFVGRPFLYAAAVAGLPGVLRAADILKSELHSNMALLGVTT 383 Query: 324 VQEL 327 ++++ Sbjct: 384 IEQI 387 >gi|145361806|ref|NP_850585.2| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332641998|gb|AEE75519.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 367 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 ++E+ N Sbjct: 346 LKEISRN 352 >gi|161524869|ref|YP_001579881.1| L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] gi|189350381|ref|YP_001946009.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] gi|160342298|gb|ABX15384.1| L-lactate dehydrogenase (cytochrome) [Burkholderia multivorans ATCC 17616] gi|189334403|dbj|BAG43473.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 405 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG R G DILK+I LGA + + PF A+ V AI L++E M +LG + Sbjct: 333 GGFRRGADILKAIALGARMVFVGRPFNYAMAVAGEAGVTHAIRLLQEEVDRDMAMLGART 392 Query: 324 VQELY 328 +L+ Sbjct: 393 CLDLH 397 >gi|260576421|ref|ZP_05844411.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sp. SW2] gi|259021304|gb|EEW24610.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sp. SW2] Length = 387 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + ++ +A V+ A+E ++KE VSM L G + Sbjct: 308 GGIRSGQDVLKALALGAKGTWIGRSYIYGLGAMGEAGVSKALEVIQKELDVSMALCGERD 367 Query: 324 VQELYLNTALI 334 V+ L L+ Sbjct: 368 VKSLRRENLLV 378 >gi|79313229|ref|NP_001030694.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|222424496|dbj|BAH20203.1| AT3G14420 [Arabidopsis thaliana] gi|332642000|gb|AEE75521.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 348 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 267 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 326 Query: 324 VQELYLN 330 ++E+ N Sbjct: 327 LKEISRN 333 >gi|15231850|ref|NP_188060.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|30683149|ref|NP_850584.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|297829994|ref|XP_002882879.1| hypothetical protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp. lyrata] gi|13124262|sp|Q9LRR9|GLO1_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; AltName: Full=Glycolate oxidase 1; Short=AtGLO1; Short=GOX 1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO1 gi|16226423|gb|AAL16164.1|AF428396_1 AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|11994212|dbj|BAB01334.1| glycolate oxidase [Arabidopsis thaliana] gi|15450741|gb|AAK96642.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|18491119|gb|AAL69528.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|297328719|gb|EFH59138.1| hypothetical protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp. lyrata] gi|332641997|gb|AEE75518.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] gi|332641999|gb|AEE75520.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 367 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 ++E+ N Sbjct: 346 LKEISRN 352 >gi|293605575|ref|ZP_06687955.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292815955|gb|EFF75056.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 80 Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA + PF A+ V AI+ L+ E +M +LG V Sbjct: 5 GVRRGGDVLKALALGARFVFVGRPFNYAAAVGGQAGVTHAIKLLQAEVDRNMAMLGINSV 64 Query: 325 QELY 328 QE++ Sbjct: 65 QEMH 68 >gi|223948343|gb|ACN28255.1| unknown [Zea mays] Length = 221 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 243 IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 +P +S E+ R GG+R G D+ K++ LGAS + P L A+D Sbjct: 117 VPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEA 176 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ LR E ++M L G ++E+ Sbjct: 177 GVRKVLQMLRDELELTMALSGCTSLREI 204 >gi|330925795|ref|XP_003301198.1| hypothetical protein PTT_12641 [Pyrenophora teres f. teres 0-1] gi|311324303|gb|EFQ90725.1| hypothetical protein PTT_12641 [Pyrenophora teres f. teres 0-1] Length = 514 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R YC E + GG++ G D++K++ LGA G+ + + V +E Sbjct: 406 RKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARGVGVGRAALFGLGAGGKEGVERVLEI 465 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 L+ M LLG +RV +L Y+NT + Sbjct: 466 LKAGTETCMRLLGVERVDQLGVQYINTRAVER 497 >gi|222629585|gb|EEE61717.1| hypothetical protein OsJ_16218 [Oryza sativa Japonica Group] Length = 315 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLL 319 FI SG R G D+ K++ LGAS + P L A+D V A+ LR E ++M L Sbjct: 231 FIDSG-FRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLRDELEITMALS 289 Query: 320 GTKRVQEL 327 G V+E+ Sbjct: 290 GCTSVKEI 297 >gi|169773829|ref|XP_001821383.1| cytochrome b2 [Aspergillus oryzae RIB40] gi|238491848|ref|XP_002377161.1| mitochondrial cytochrome b2-like, putative [Aspergillus flavus NRRL3357] gi|83769244|dbj|BAE59381.1| unnamed protein product [Aspergillus oryzae] gi|220697574|gb|EED53915.1| mitochondrial cytochrome b2-like, putative [Aspergillus flavus NRRL3357] Length = 495 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 79/358 (22%), Positives = 133/358 (37%), Gaps = 74/358 (20%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK FD R L + VD + LG S PL +S M + I+ + Sbjct: 145 DANKSCFDRIWFRPRVLKNVR--SVDTKTKILGIDSSLPLFVSPAA-----MAKLIHPDG 197 Query: 80 AIAAEKTKVAMAVGSQRVM--FSDHNAIKSFELRQYAPHTVLI----------------- 120 A +A A G+ +M S++++ ELR AP Sbjct: 198 ECA-----IARACGNHGIMQGISNNSSYTMEELRDTAPSASFFFQLYVNRDREKSAALLR 252 Query: 121 -----SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN------TNF 168 N+ A+ + D +A + AD GL + + P + G F Sbjct: 253 QCSANPNVKAIFVTVDAAWPGKREADERVKADEGLSVPMAPSKAKNDNKGGGLGRVMAGF 312 Query: 169 ADLS---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D + + +P+ LK V +S+ D L +++G+ ++ GG Sbjct: 313 IDPGLTWEDLVWVRQHTHLPVCLKGV---MSADDAMLAMEAGLDGILLSNHGG------- 362 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGA 281 R+L++ P+ ++L + C E + G+R G DILK+I LGA Sbjct: 363 --RNLDT---------SPPSIITLLELQKRCPEIFDKMEIYVDSGIRRGTDILKAICLGA 411 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + G+ L + V I+ ++ E +M +G + E ++TA I H Sbjct: 412 TAVGMGRSMLFATNYGQEGVEHLIDIMKDELETAMRNIGITTLDEAGPHLVHTADIDH 469 >gi|332206988|ref|XP_003252576.1| PREDICTED: hydroxyacid oxidase 1 [Nomascus leucogenys] Length = 370 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPVVWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|94309784|ref|YP_582994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cupriavidus metallidurans CH34] gi|93353636|gb|ABF07725.1| (S)-2-hydroxy-acid oxidase 1 [Cupriavidus metallidurans CH34] Length = 361 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K+I LGAS L P L A+ VV + L+ E +M LLG Sbjct: 288 GGVRRGTDIVKAIALGASAVLLGQPVLHALAVGGMPGVVHMLTLLQTELEAAMALLGRPT 347 Query: 324 VQELYLNTALIR 335 ++++ +T + R Sbjct: 348 LRDIDASTLMGR 359 >gi|310790967|gb|EFQ26500.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 495 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIES 307 R YC E + GG++ G DI+K++ LGA G+ + V E Sbjct: 383 RKYCPEVFDKIEVWVDGGIKRGTDIVKALCLGAKAVGIGRAALFGLGAGGQAGVERTYEI 442 Query: 308 LRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 L+ E M LLG K V +L ++NT + Sbjct: 443 LKGEMETCMRLLGAKSVSDLGPHFINTRAVER 474 >gi|224031779|gb|ACN34965.1| unknown [Zea mays] Length = 193 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESL 308 E+ + + GG+R G D+LK++ LGA + P F A IE L Sbjct: 99 EVVKAVAGAVPVLVDGGVRRGTDVLKALALGAKAVMVGRPVFFGLAARGEAGARHVIEML 158 Query: 309 RKEFIVSMFLLGTKRVQEL 327 KE ++M L G + V E+ Sbjct: 159 NKELELAMALCGCRSVAEV 177 >gi|147789493|emb|CAN67413.1| hypothetical protein VITISV_005886 [Vitis vinifera] Length = 371 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + ++P+L+K V L++ D L +++G ++ G R L Sbjct: 216 VKWLQTITNLPILVKGV---LTAEDTRLAIQAGAAGIIVSNHGA---------RQL---- 259 Query: 235 GIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 D+ T ++LE + + GG+R G D+ K++ LGAS + P + Sbjct: 260 -----DYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFS 314 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V ++ LR+EF ++M L G + ++E+ Sbjct: 315 LAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEI 349 >gi|17473683|gb|AAL38298.1| glycolate oxidase [Arabidopsis thaliana] gi|20148475|gb|AAM10128.1| glycolate oxidase [Arabidopsis thaliana] Length = 177 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 96 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 155 Query: 324 VQELYLN 330 ++E+ N Sbjct: 156 LKEISRN 162 >gi|254459433|ref|ZP_05072852.1| glutamate synthase domain protein [Campylobacterales bacterium GD 1] gi|207083843|gb|EDZ61136.1| glutamate synthase domain protein [Campylobacterales bacterium GD 1] Length = 468 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 27/151 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E R+ S +PT +L AR Y ++ Sbjct: 333 DIQFALDASADYIILDGRGGGTGAAPEMFRNHIS----------VPTIPALARARKYLDK 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLK------PAMDSSDAVVAAIE 306 I +GGLR +D +K++ LGA L++ ++ M +++ A I Sbjct: 383 QGASGRVTLIITGGLRVPIDFVKAMALGADGVALSNSAIQAIGCVGARMCNTNNCPAGIA 442 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +K ++ ++ L K Q Y+ + HQ Sbjct: 443 TQKKSYVKNLIL---KNHQSSYIT--FLMHQ 468 >gi|281341108|gb|EFB16692.1| hypothetical protein PANDA_018385 [Ailuropoda melanoleuca] Length = 340 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 21/147 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 214 LSWLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVPASIDALTEV 270 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + + + GG+R G D+LK++ LGA L P L Sbjct: 271 VAAVK-----------------GKMEVYLDGGIRTGNDVLKALALGAKCVFLGRPILWGL 313 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLG 320 A V + ++ EF SM L G Sbjct: 314 AYKGEHGVEEVLNLIKNEFHTSMTLTG 340 >gi|205354703|ref|YP_002228504.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858931|ref|YP_002245582.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|259494494|sp|B5R5C7|LLDD_SALEP RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494495|sp|B5RGI4|LLDD_SALG2 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|205274484|emb|CAR39517.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710734|emb|CAR35095.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629842|gb|EGE36185.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 396 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTISEI 370 >gi|168818478|ref|ZP_02830478.1| L-lactate dehydrogenase ( cytochrome) [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344295|gb|EDZ31059.1| L-lactate dehydrogenase ( cytochrome) [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088112|emb|CBY97874.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 396 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|161616771|ref|YP_001590736.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168260553|ref|ZP_02682526.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|259491770|sp|A9MVJ5|LLDD_SALPB RecName: Full=L-lactate dehydrogenase [cytochrome] gi|161366135|gb|ABX69903.1| hypothetical protein SPAB_04590 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205350397|gb|EDZ37028.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 396 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|219884085|gb|ACL52417.1| unknown [Zea mays] Length = 305 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESL 308 E+ + + GG+R G D+LK++ LGA + P F A IE L Sbjct: 211 EVVKAVAGAVPVLVDGGVRRGTDVLKALALGAKAVMVGRPVFFGLAARGEAGARHVIEML 270 Query: 309 RKEFIVSMFLLGTKRVQEL 327 KE ++M L G + V E+ Sbjct: 271 NKELELAMALCGCRSVAEV 289 >gi|168465000|ref|ZP_02698892.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|200387947|ref|ZP_03214559.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|195632179|gb|EDX50663.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|199605045|gb|EDZ03590.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 396 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|167549060|ref|ZP_02342819.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168241871|ref|ZP_02666803.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447309|ref|YP_002047724.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|238910271|ref|ZP_04654108.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|259491768|sp|B4T986|LLDD_SALHS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194405613|gb|ACF65832.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205325623|gb|EDZ13462.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338956|gb|EDZ25720.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 396 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|254475887|ref|ZP_05089273.1| L-lactate dehydrogenase [Ruegeria sp. R11] gi|214030130|gb|EEB70965.1| L-lactate dehydrogenase [Ruegeria sp. R11] Length = 389 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%) Query: 266 GLRNGVDILKSIILGA--SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G DILK+I LGA ++ G A + AM + V A+E L KE +M L G K Sbjct: 309 GIRSGQDILKAIALGAKGTMIGRAFVYGLGAMGQA-GVTKALEVLHKELDTTMALCGEKT 367 Query: 324 VQELYLNTALI 334 V L + LI Sbjct: 368 VHGLGRHNLLI 378 >gi|170057205|ref|XP_001864380.1| peroxisomal [Culex quinquefasciatus] gi|167876702|gb|EDS40085.1| peroxisomal [Culex quinquefasciatus] Length = 364 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ + + GG+ G D+ K++ LGA + P L A++ V ++ L Sbjct: 272 EIVAAVGDRTTIVLDGGVTEGTDVFKALALGAKMAFFGRPALWGLAVNGQQGVEHVLDIL 331 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 RKE V+M L G + V ++ N Sbjct: 332 RKELDVAMALAGCRCVADITRN 353 >gi|161505772|ref|YP_001572884.1| L-lactate dehydrogenase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|259494492|sp|A9MLC3|LLDD_SALAR RecName: Full=L-lactate dehydrogenase [cytochrome] gi|160867119|gb|ABX23742.1| hypothetical protein SARI_03948 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 396 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|33592416|ref|NP_880060.1| putative L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|33572061|emb|CAE41589.1| putative L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|332381832|gb|AEE66679.1| putative L-lactate dehydrogenase [Bordetella pertussis CS] Length = 393 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA L PF A +A VA AI LR+E +M +LG R Sbjct: 323 GIRRGGDVLKALALGARFVFLGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLGVTRC 382 Query: 325 QEL 327 + Sbjct: 383 TAM 385 >gi|2385386|emb|CAA04758.1| L-mandelate dehydrogenase [Rhodotorula graminis] Length = 565 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 40/260 (15%) Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + IA EK K A+A+G++ + + + R L A NY+ + Sbjct: 323 VHSDKKIAEEKLKRALALGAKAIFVTVDVPVLGKRERDL--------KLKARSQNYEHPI 374 Query: 135 QKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 +A + + ++ + + + N N+ D++ + A VP+++K VGC Sbjct: 375 AAQWKAAGSKVEETIAKRGVSDIPDTAHIDANLNWDDIAW---IKERAPGVPIVIKGVGC 431 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS--LEM 251 D+EL + G ++ G R L+ G PL +E+ Sbjct: 432 ---VEDVELAKQYGADGVVLSTHGA---------RQLD----------GARAPLDVLIEV 469 Query: 252 ARP---YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIES 307 R E + G R G D+LK++ LGA G FL + +D V AI Sbjct: 470 RRKNPALLKEIEVYVDGQARRGTDVLKALCLGARGVGFGRGFLYAQSAYGADGVDKAIRI 529 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L E +M LLG + +L Sbjct: 530 LENEIQNAMRLLGANTLADL 549 >gi|16766979|ref|NP_462594.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994313|ref|ZP_02575405.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232537|ref|ZP_02657595.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471842|ref|ZP_03077826.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251856|ref|YP_002148626.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265156|ref|ZP_03165230.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243712|ref|YP_002217656.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|81853650|sp|Q8ZL61|LLDD_SALTY RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494491|sp|B5EXA8|LLDD_SALA4 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494493|sp|B5FLH2|LLDD_SALDC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|16422260|gb|AAL22553.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194458206|gb|EDX47045.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197215559|gb|ACH52956.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243411|gb|EDY26031.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938228|gb|ACH75561.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205327787|gb|EDZ14551.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333248|gb|EDZ20012.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|261248842|emb|CBG26695.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995952|gb|ACY90837.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160230|emb|CBW19752.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321226747|gb|EFX51797.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132054|gb|ADX19484.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625440|gb|EGE31785.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990543|gb|AEF09526.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 396 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|194446309|ref|YP_002042943.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|259491769|sp|B4SXA4|LLDD_SALNS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194404972|gb|ACF65194.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 396 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|225462096|ref|XP_002277249.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086772|emb|CBI32921.3| unnamed protein product [Vitis vinifera] Length = 371 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + ++P+L+K V L++ D L +++G ++ G R L Sbjct: 216 VKWLQTITNLPILVKGV---LTAEDTRLAIQAGAAGIIVSNHGA---------RQL---- 259 Query: 235 GIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 D+ T ++LE + + GG+R G D+ K++ LGAS + P + Sbjct: 260 -----DYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFS 314 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V ++ LR+EF ++M L G + ++E+ Sbjct: 315 LAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEI 349 >gi|56415584|ref|YP_152659.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364511|ref|YP_002144148.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821571|sp|Q5PLQ7|LLDD_SALPA RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491772|sp|B5BHX7|LLDD_SALPK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|56129841|gb|AAV79347.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095988|emb|CAR61575.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 396 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLVEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|242074364|ref|XP_002447118.1| hypothetical protein SORBIDRAFT_06g028990 [Sorghum bicolor] gi|241938301|gb|EES11446.1| hypothetical protein SORBIDRAFT_06g028990 [Sorghum bicolor] Length = 367 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 243 IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 +P +S E+ R GG+R G D+ K++ LGAS + P L A+D Sbjct: 263 VPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEA 322 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ LR E ++M L G ++E+ Sbjct: 323 GVRKVLQMLRDELELTMALSGCTSLREI 350 >gi|209547680|ref|YP_002279597.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533436|gb|ACI53371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 382 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETIRTEIERDMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDQL 373 >gi|168235301|ref|ZP_02660359.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734323|ref|YP_002116631.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|259491773|sp|B4TZU7|LLDD_SALSV RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194709825|gb|ACF89046.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291426|gb|EDY30778.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 396 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|126728455|ref|ZP_01744271.1| L-lactate dehydrogenase (cytochrome) protein [Sagittula stellata E-37] gi|126711420|gb|EBA10470.1| L-lactate dehydrogenase (cytochrome) protein [Sagittula stellata E-37] Length = 377 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 245 TPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVV 302 +PL L AR + + GG+R G D++K++ LGA + + PFL A + V Sbjct: 285 SPLRLLPEARAQAGDMGLLIDGGIRRGTDVIKALALGADMVLVGRPFLYAATLGGQPMVE 344 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A + L+ E ++ LLG + + E+ Sbjct: 345 RAADILKAEVHRNLGLLGLRDLSEI 369 >gi|312914720|dbj|BAJ38694.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 396 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|257452019|ref|ZP_05617318.1| FMN-dependent family dehydrogenase [Fusobacterium sp. 3_1_5R] gi|317058568|ref|ZP_07923053.1| dehydrogenase [Fusobacterium sp. 3_1_5R] gi|313684244|gb|EFS21079.1| dehydrogenase [Fusobacterium sp. 3_1_5R] Length = 340 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 65/323 (20%), Positives = 130/323 (40%), Gaps = 48/323 (14%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDP--SVEFLGKKLSFPLLISSMTG-----GNNKMIER 74 N + HL R L + DP +++ G+ LS P+L + +TG G E Sbjct: 48 NYTSLKNIHLKMRCLHKAK----DPKTTLQLFGQNLSMPILGAPITGPKFNFGGYVNQEE 103 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + A+ T +G + IKS L++ + I ++ Y+ + Sbjct: 104 FCDDIILGAKATGTLAMIGDTGDPTAYEAGIKS--LKRANGFGIAI-----IKPRYNEEI 156 Query: 135 QKAHQAVHVLGADGLFLHLN-----PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 K + GA + + L+ ++ QP + DL L ++ ++P ++K Sbjct: 157 IKRIRIAEEAGAIAVGIDLDGAGLLTMKLFNQPVEPKSMEDLKE----LVNSTNLPFIVK 212 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + LS D + +++G+ ++ GG V D P + Sbjct: 213 GI---LSVEDAKACVEAGVDAIVVSNHGGR-----------------VLDDCISPVEVLQ 252 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 ++ N+ + G +R+G D+LK + LGA + P + ++ + + + +SL Sbjct: 253 DIVEAVGNQIIVLVDGNVRSGEDVLKYLALGARAVLIGRPCIWASVGNRQEGMETLFQSL 312 Query: 309 RKEFIVSMFLLGTKRVQELYLNT 331 + + +M + G VQE+ NT Sbjct: 313 QSQLYKAMLMTGNHSVQEISPNT 335 >gi|224585495|ref|YP_002639294.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|259491771|sp|C0Q1T7|LLDD_SALPC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|224470023|gb|ACN47853.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 396 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTISEI 370 >gi|190890098|ref|YP_001976640.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190695377|gb|ACE89462.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 382 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETIRTEIERDMKLMGCTS 369 Query: 324 VQEL 327 + +L Sbjct: 370 IDQL 373 >gi|86356082|ref|YP_467974.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86280184|gb|ABC89247.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 382 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALENIRTEIERDMKLMGCTS 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDQL 373 >gi|62182188|ref|YP_218605.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309549|sp|Q57ID8|LLDD_SALCH RecName: Full=L-lactate dehydrogenase [cytochrome] gi|62129821|gb|AAX67524.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716676|gb|EFZ08247.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 396 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTISEI 370 >gi|296810262|ref|XP_002845469.1| L-lactate ferricytochrome c oxidoreductase [Arthroderma otae CBS 113480] gi|238842857|gb|EEQ32519.1| L-lactate ferricytochrome c oxidoreductase [Arthroderma otae CBS 113480] Length = 494 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 240 DWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L R YC N + GG++ G D++K++ LGA G+ + A Sbjct: 370 DTAPPAVHTLMEIRKYCPEVFNRVEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFSLA 429 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 V E L E + +M LLG +V++L ++N + Q Sbjct: 430 AGGIQGVERMFEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 475 >gi|242074366|ref|XP_002447119.1| hypothetical protein SORBIDRAFT_06g029000 [Sorghum bicolor] gi|241938302|gb|EES11447.1| hypothetical protein SORBIDRAFT_06g029000 [Sorghum bicolor] Length = 367 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 25/156 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L + +P+L+K V +++ D L ++ G+ ++ GG R L+ Sbjct: 217 IKWLQTITRLPILVKGV---ITAEDARLAIECGVAGIIMSNHGG---------RQLDY-- 262 Query: 235 GIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 +P +S E+ R G+R G D+ K++ LGAS + P L Sbjct: 263 --------LPATISCLEEVVREAKGRVPVFLDSGIRRGTDVFKALALGASGVFIGRPVLF 314 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+D V A++ LR E ++M L G ++++ Sbjct: 315 ALAVDGKAGVRNALQMLRDELEITMALSGCTSLKDI 350 >gi|189426589|ref|YP_001953766.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geobacter lovleyi SZ] gi|189422848|gb|ACD97246.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geobacter lovleyi SZ] Length = 407 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 +A GG+R G D+LK + LGA + P ++ ++ + V ++ ++ E +V+M L Sbjct: 334 ILADGGVRYGADVLKMLALGADAVLVGRPLVRGSVGGGPEGVALMLKKMQGELVVAMTLT 393 Query: 320 GTKRVQEL 327 GT V+++ Sbjct: 394 GTADVKKV 401 >gi|254490988|ref|ZP_05104170.1| FMN-dependent dehydrogenase superfamily [Methylophaga thiooxidans DMS010] gi|224463897|gb|EEF80164.1| FMN-dependent dehydrogenase superfamily [Methylophaga thiooxydans DMS010] Length = 369 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 24/178 (13%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYF 211 +P Q ++ G + A IA L +P++LK G+ S+D + K+ GI Sbjct: 207 FDPSQSVVF-QGMMSEAPTWDDIAWLQQQTSLPIILK----GVLSVDDAIKAKAMGIAGI 261 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG + + + ++ + ++ Q G PL + G + G Sbjct: 262 VVSNHGGRTLDCLPASIEM---LPLIRQAVGPDYPLVFD--------------GAVERGT 304 Query: 272 DILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 DI K++ LGA+L + P F A+ + V + LR+E V M L GT ++ +++ Sbjct: 305 DIFKALALGANLVCVGRPQFYALAVAGALGVAHLLRVLREELEVCMSLAGTPQIADIH 362 >gi|323944237|gb|EGB40316.1| L-lactate dehydrogenase [Escherichia coli H120] Length = 149 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 9/102 (8%) Query: 235 GIVFQDWG---IPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGL 286 GIV + G + LS A P +A +A G+RNG+D+++ I LGA L Sbjct: 22 GIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLL 81 Query: 287 ASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLLGTKRVQEL 327 FL + A VA + +L KE V+M L G K + E+ Sbjct: 82 GRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSICEI 123 >gi|223943087|gb|ACN25627.1| unknown [Zea mays] Length = 367 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 243 IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 +P +S E+ R GG+R G D+ K++ LGAS + P L A+D Sbjct: 263 VPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEA 322 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ LR E ++M L G ++E+ Sbjct: 323 GVRKVLQMLRDELELTMALSGCTSLREI 350 >gi|326318206|ref|YP_004235878.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375042|gb|ADX47311.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] Length = 378 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 + + +A G+RNG+D++++I LGA + F+ + +A V +E L KE V+ Sbjct: 299 GQIKILADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVA 358 Query: 316 MFLLGTKRVQEL 327 M L +V ++ Sbjct: 359 MTLTSVAKVSDI 370 >gi|148653264|ref|YP_001280357.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] gi|148572348|gb|ABQ94407.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] Length = 352 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA L P + S+ V A++ L+ EF ++M L G Sbjct: 282 GGIRRGTDVLKALALGADAVLLGKPIAQALGAAGSEGVAKALKILQHEFEMAMTLTGYNT 341 Query: 324 VQEL 327 + + Sbjct: 342 INSI 345 >gi|289621340|emb|CBI52123.1| unnamed protein product [Sordaria macrospora] Length = 521 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 R YC E + GG++ G D +K++ LGA G+ L S V E Sbjct: 409 RKYCPEVFGAVEVWIDGGIKRGTDAVKALCLGAKAVGVGRAALWGLGASGWQGVERTFEI 468 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L++E I M LLG K + +L Sbjct: 469 LQQEIITCMKLLGAKTIDDL 488 >gi|262193414|ref|YP_003264623.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haliangium ochraceum DSM 14365] gi|262076761|gb|ACY12730.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haliangium ochraceum DSM 14365] Length = 391 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + I GG+R G D++K++ LGAS L P L A D + + LR E ++ Sbjct: 293 RQVAIILDGGVRRGTDVIKAVALGASAVALGRPVLWGLAYDGQAGLSKLLGLLRDEIDLA 352 Query: 316 MFLLGTKRVQEL 327 M L G V +L Sbjct: 353 MALCGCPSVGDL 364 >gi|224121620|ref|XP_002330746.1| predicted protein [Populus trichocarpa] gi|118486606|gb|ABK95141.1| unknown [Populus trichocarpa] gi|222872522|gb|EEF09653.1| predicted protein [Populus trichocarpa] Length = 369 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR+EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLASEGETGVRKVLQMLREEFELTMALSGCRS 345 Query: 324 VQEL 327 ++E+ Sbjct: 346 LKEI 349 >gi|187921055|ref|YP_001890087.1| L-lactate dehydrogenase [Burkholderia phytofirmans PsJN] gi|187719493|gb|ACD20716.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phytofirmans PsJN] Length = 402 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ R + GG+R G DILK+ LGA L F P A V AA+E L Sbjct: 304 EIRRAVGRDTAVFLDGGVRTGEDILKACALGAGLCFSGRSFAFPVAAYGERGVRAAVEIL 363 Query: 309 RKEFIVSMFLLGTKRVQEL 327 ++E V + LG + + L Sbjct: 364 KEEIRVGLAQLGVQSLSAL 382 >gi|15828105|ref|NP_302368.1| L-lactate dehydrogenase [Mycobacterium leprae TN] gi|221230582|ref|YP_002503998.1| L-lactate dehydrogenase [Mycobacterium leprae Br4923] gi|13093659|emb|CAC31001.1| L-lactate dehydrogenase [Mycobacterium leprae] gi|219933689|emb|CAR72143.1| L-lactate dehydrogenase [Mycobacterium leprae Br4923] Length = 414 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 P P L +AR + + + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPTVAREFGKDTEILLDTGIMSGADIVAAIALGARCTLVGRAYLYGLMAGGEAG 369 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L I +M LLG ++EL Sbjct: 370 VRRAIEILESGVIRTMQLLGVTCLEEL 396 >gi|291228831|ref|XP_002734381.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 362 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLR 309 ++R ++ + GG+R G D+LK++ LGA + P + + S + V I + L+ Sbjct: 272 ISRAVGDKIEVYMDGGVRTGTDVLKALALGAKAVFIGRPIVFGLVHSGEQGVKNILQILK 331 Query: 310 KEFIVSMFLLGTKRVQEL 327 +EF ++M L G + ++++ Sbjct: 332 EEFSLAMTLSGCRTIRDI 349 >gi|33597475|ref|NP_885118.1| putative L-lactate dehydrogenase [Bordetella parapertussis 12822] gi|33573903|emb|CAE38218.1| putative L-lactate dehydrogenase [Bordetella parapertussis] Length = 402 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA L PF A +A VA AI LR+E +M +LG R Sbjct: 332 GIRRGGDVLKALALGARFVFLGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLGVTRC 391 Query: 325 QEL 327 + Sbjct: 392 TAM 394 >gi|120612170|ref|YP_971848.1| L-lactate dehydrogenase [Acidovorax citrulli AAC00-1] gi|120590634|gb|ABM34074.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax citrulli AAC00-1] Length = 378 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFL 318 + +A G+RNG+D++++I LGA + F+ + +A V +E L KE V+M L Sbjct: 302 KILADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTL 361 Query: 319 LGTKRVQEL 327 +V ++ Sbjct: 362 TSVAKVSDI 370 >gi|157821243|ref|NP_001101250.1| hydroxyacid oxidase 1 [Rattus norvegicus] gi|149023391|gb|EDL80285.1| hydroxyacid oxidase 1 (mapped) [Rattus norvegicus] gi|165971303|gb|AAI58805.1| Hydroxyacid oxidase 1 [Rattus norvegicus] Length = 370 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGARAVFVGRPIIWGLAFQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|15229497|ref|NP_188059.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|13124263|sp|Q9LRS0|GLO2_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 1; Short=AtGLO2; Short=GOX 1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 gi|11994211|dbj|BAB01333.1| glycolate oxidase [Arabidopsis thaliana] gi|16604394|gb|AAL24203.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|22531128|gb|AAM97068.1| glycolate oxidase [Arabidopsis thaliana] gi|25083945|gb|AAN72140.1| glycolate oxidase [Arabidopsis thaliana] gi|62320779|dbj|BAD95441.1| glycolate oxidase like protein [Arabidopsis thaliana] gi|332641994|gb|AEE75515.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] gi|332641996|gb|AEE75517.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 367 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 + E+ N Sbjct: 346 LSEITRN 352 >gi|33601871|ref|NP_889431.1| putative L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33576308|emb|CAE33387.1| putative L-lactate dehydrogenase [Bordetella bronchiseptica RB50] Length = 402 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA L PF A +A VA AI LR+E +M +LG R Sbjct: 332 GIRRGGDVLKALALGARFVFLGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLGVTRC 391 Query: 325 QEL 327 + Sbjct: 392 TAM 394 >gi|332527773|ref|ZP_08403812.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332112169|gb|EGJ12145.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 383 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + FL +A V A+E + KE ++M G KR Sbjct: 308 GGIRSGQDVLKAVALGARGTYIGRAFLYGLGAMGEAGVTKALEIIHKELDLTMAFCGRKR 367 Query: 324 VQEL 327 + ++ Sbjct: 368 IADV 371 >gi|33598877|ref|NP_886520.1| L-lactate dehydrogenase [Bordetella parapertussis 12822] gi|33603954|ref|NP_891514.1| L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33568930|emb|CAE35344.1| L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33575007|emb|CAE39673.1| L-lactate dehydrogenase [Bordetella parapertussis] Length = 387 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + FL A V A+E L KE V+M L G K Sbjct: 312 GGIRSGQDVLKAVALGARGTMIGRAFLYGLGAYGQAGVTRALEILYKEMDVTMALCGHKH 371 Query: 324 VQEL 327 + ++ Sbjct: 372 ISQI 375 >gi|302915312|ref|XP_003051467.1| hypothetical protein NECHADRAFT_41767 [Nectria haematococca mpVI 77-13-4] gi|256732405|gb|EEU45754.1| hypothetical protein NECHADRAFT_41767 [Nectria haematococca mpVI 77-13-4] Length = 330 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 21/159 (13%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D + I L + L +K V ++ D++L +K G+ ++ GG + + D Sbjct: 175 DWDTAIPWLRQHTKLQLWIKGV---YAAEDVQLAIKYGLDGVIVSNHGGRQLDGVPATLD 231 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS- 288 + ++ + IP + GG+R G DI K++ +GAS + Sbjct: 232 ALREC-VIAANGKIPVAVD----------------GGIRRGTDIFKALAMGASHCFVGRI 274 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P A + + V A++ L EF ++M L G + ++++ Sbjct: 275 PIWGLAYNGQEGVELALKILMYEFKLAMALAGCRTIKDI 313 >gi|149372997|ref|ZP_01891953.1| ferredoxin-dependent glutamate synthase [unidentified eubacterium SCB49] gi|149354357|gb|EDM42924.1| ferredoxin-dependent glutamate synthase [unidentified eubacterium SCB49] Length = 536 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 92/245 (37%), Gaps = 30/245 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQ 112 +L PL +S M+ G +I LA AE + G ++ S+ N K F Sbjct: 205 ELDMPLFVSDMSFGALSREAKIA--LAKGAELAGTGICSGEGGILPSEQANNSKYFYELA 262 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAV--HVLGAD-----GLFLHLNPLQEIIQPNGN 165 A L VQ + G Q A H+ G+ L + I P N Sbjct: 263 SAQFGFSWDKLDNVQAFHFKGGQGAKTGTGGHLPGSKVSKEIAEVRGLKEGETAISPAAN 322 Query: 166 TNFADLSS-KI---ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 NF + KI + +P+ K + DI+ L G+ Y + GRGG + Sbjct: 323 PNFHSVEDFKIFADKVRERTGGIPIGFK-IAASHIEKDIQFALDVGVDYIILDGRGGGTG 381 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-----AQFIASGGLRNGVDILKS 276 S RD +PT +L AR Y ++ + +GGLR D K+ Sbjct: 382 SAPTILRD----------HINVPTIPALARARKYMDQVGATDVTLVITGGLRVAEDFAKA 431 Query: 277 IILGA 281 ++LGA Sbjct: 432 MMLGA 436 >gi|253997461|ref|YP_003049525.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylotenera mobilis JLW8] gi|253984140|gb|ACT48998.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylotenera mobilis JLW8] Length = 362 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 54/335 (16%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N FD L+ R L ++ + G+ PLL++ + ++ ++A Sbjct: 49 NLDAFDGVQLMSRPLTDVRCGHT--RINLFGQNFEHPLLLAPIA--YQRLFHDHGESVAA 104 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYA--PHTVLISN------LGAVQ 127 A + V S S I++ F+L P T+ + N AV Sbjct: 105 MAANAQTGQMVVSSLASQSLEEIIEAAGQPLWFQLYWQGDRPRTLRLLNRALSAGYNAVM 164 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHL-NPL-QEIIQPNGNTNFADLSSK------IALLS 179 D V+ QAV L D ++L +PL Q +Q N + F ++ +A L Sbjct: 165 FTVDAPVK---QAVMALPDDVRAVNLESPLSQPPVQANQSLVFDGWMTQAPSWDDVAWLR 221 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VPLL+K + L + D+ L+ G ++ GG R L+ Sbjct: 222 DQIKVPLLVKGL---LHTDDVANTLRLGCDGLVVSNHGG---------RVLD-------- 261 Query: 240 DWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 G+PT L++ E+A +A + G+R G D K++ LGA + P++ ++ Sbjct: 262 --GVPTSLAVLPEIANMVAGKACLLFDSGIRRGQDAFKALALGADAVMIGRPYIWGLSVA 319 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + V I +R E ++M L G + ++ L++ Sbjct: 320 GALGVAHVIRLMRDELEMTMALSGAATLADIKLSS 354 >gi|88798485|ref|ZP_01114070.1| putative glutamate synthetase [Reinekea sp. MED297] gi|88778925|gb|EAR10115.1| putative glutamate synthetase [Reinekea sp. MED297] Length = 517 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 111/296 (37%), Gaps = 50/296 (16%) Query: 18 GIDRNKKFFDDWHLIHRALPEIS----FDEVDPSVEFL-------GKKLSFPLLISSMTG 66 G+ R + DW+ I +++ D+VD + E + KLS PLL+S M+ Sbjct: 135 GVPRQQ--LPDWNDIQIMTAQLATQPQLDDVDVASELIIGPNARKPLKLSMPLLVSDMSF 192 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN--LG 124 G + E +A A++ + G + M + A +YA S+ L Sbjct: 193 G--ALSEEAKTAMARGADQAGTGICSG-EGGMLPEEQAENRRYFYEYASAGFGYSDDKLD 249 Query: 125 AVQLNYDFGVQKAHQ-------AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 VQ + G Q A A V L ++ I P F DL + Sbjct: 250 KVQAFHFKGGQGAKTGTGGHLPANKVTDKIAEVRGLKAGEDAISP---ATFKDLHTPQDF 306 Query: 178 LSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + A V + G DI+ L + Y + GRGG + + E RD Sbjct: 307 HAFADRVRERTGGIPIGFKLSANHIEKDIQFALDASADYLILDGRGGGTGAAPELFRDHI 366 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGA 281 S +PT +L AR Y ++ I +GGLR D +K++ LGA Sbjct: 367 S----------VPTIPALARARRYLDQQGASGRVTLIITGGLRTPADFVKALALGA 412 >gi|86741103|ref|YP_481503.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] gi|86567965|gb|ABD11774.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] Length = 406 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D++K++ LGA+ + P+L +A V+ IE LR EF +M LLG Sbjct: 324 GGVRRGNDVVKALALGAAGVFVGRPYLYGLAAGGEAGVLRMIELLRVEFDHAMALLGAAT 383 Query: 324 VQEL 327 V +L Sbjct: 384 VADL 387 >gi|15231789|ref|NP_188029.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|75335069|sp|Q9LJH5|GLO4_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; AltName: Full=Glycolate oxidase 4; Short=AtGLO4; Short=GOX 4; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO4 gi|9294638|dbj|BAB02977.1| glycolate oxidase [Arabidopsis thaliana] gi|27754229|gb|AAO22568.1| putative glycolate oxidase [Arabidopsis thaliana] gi|332641954|gb|AEE75475.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] Length = 363 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V I+ L+ EF ++M L G Sbjct: 284 GGVRRGTDVFKALALGAQAVLIGRPIVYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPT 343 Query: 324 VQELYLN 330 + ++ N Sbjct: 344 IDDVTRN 350 >gi|239994576|ref|ZP_04715100.1| L-lactate dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 377 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+D+++ + LGA L F+ A + V ++ ++E V+M L G K V Sbjct: 308 GIRNGLDVVRMLALGADCTLLGRSFIYALAAEGQQGVENLLDLYKQEMHVAMTLCGAKSV 367 Query: 325 QELYLNT 331 EL L++ Sbjct: 368 SELNLDS 374 >gi|21537253|gb|AAM61594.1| glycolate oxidase, putative [Arabidopsis thaliana] Length = 363 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V I+ L+ EF ++M L G Sbjct: 284 GGVRRGTDVFKALALGAQAVLIGRPIVYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPT 343 Query: 324 VQELYLN 330 + ++ N Sbjct: 344 IDDVTRN 350 >gi|54043095|gb|AAV28535.1| glycolate oxidase [Brassica napus] Length = 367 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQELYLN 330 + E+ N Sbjct: 346 LSEITRN 352 >gi|307301351|ref|ZP_07581113.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] gi|307318024|ref|ZP_07597461.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306896426|gb|EFN27175.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306903807|gb|EFN34394.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] Length = 381 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P + A V A+E +R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQAGVERALELMRVEIERGMKLMGCSS 369 Query: 324 VQEL 327 V EL Sbjct: 370 VDEL 373 >gi|25029318|ref|NP_739372.1| putative L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|259505679|ref|ZP_05748581.1| L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|23494606|dbj|BAC19572.1| putative L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|259166761|gb|EEW51315.1| L-lactate dehydrogenase [Corynebacterium efficiens YS-314] Length = 417 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 P P L ++ R +E + G+ NG DI+ +I LGA + +L M Sbjct: 309 PVPFHLLPQVRREVGSEPTIMIDTGIMNGADIVAAIALGADFTLIGRAYLYGLMAGGRQG 368 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE LR E +M LLG + EL Sbjct: 369 VDRTIEILRTEITRTMALLGVSTLDEL 395 >gi|332641995|gb|AEE75516.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 373 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + Sbjct: 292 GGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRS 351 Query: 324 VQELYLN 330 + E+ N Sbjct: 352 LSEITRN 358 >gi|308126438|ref|ZP_05910094.2| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AQ4037] gi|308108968|gb|EFO46508.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AQ4037] Length = 469 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ PLL+S ++ G +E+ K+A+A G++ + + Sbjct: 135 KLAIPLLVSDISFG-------------ALSEEAKIALAKGAELAGTGICSGEGGMLPEEQ 181 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQ-------P 162 A ++ L + + YD QA H G G HL + + + P Sbjct: 182 AANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIP 241 Query: 163 NGNT-----NFADLSSKIALLSSAMDVPLLLKEVGCGLS------SMDIELGLKSGIRYF 211 G F DL + A V + + G DI+ L + Y Sbjct: 242 EGQPAISPPTFTDLHTTHDFRKFADRVRGITGGIPIGFKLSANHIEQDIQFALDASADYI 301 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASG 265 + GRGG + + RD S +PT +L AR Y +E I +G Sbjct: 302 ILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDEKGASDRVTLIITG 351 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 GLR +D +K++ LGA +A+ AM S V A I Sbjct: 352 GLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|238498008|ref|XP_002380239.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] gi|220693513|gb|EED49858.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] Length = 150 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 257 NEAQFIAS--GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + AQ A+ GG+ G DI+K+I LGA GL PFL AI L+ E Sbjct: 53 STAQRFATVDGGITRGADIVKAIALGARAVGLGRPFLYGVAFGEAGASKAIRILKDEIET 112 Query: 315 SMFLLG 320 +M +LG Sbjct: 113 TMAVLG 118 >gi|218682819|ref|ZP_03530420.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 894] Length = 172 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 100 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETIRTEIERDMKLMGCTS 159 Query: 324 VQEL 327 V +L Sbjct: 160 VDQL 163 >gi|313903725|ref|ZP_07837114.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] gi|313465913|gb|EFR61438.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] Length = 524 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 62/261 (23%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQ 112 L P+LI+ M G LA+ E KVA+A S V + ++ F + R+ Sbjct: 129 LKIPILITGMAYG-----------LALTRE-AKVALARASAMVGTATNSGESGFLADERR 176 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHV-----LGADGLFLHLNPLQEIIQPNGN-- 165 +A H ++ N G ++ ++ QA + GAD P + +P Sbjct: 177 HAKHYIVQYNRG----GWNIRPEQLRQADAIEIQFGQGADASAQESTPWDMLDEPVRRHL 232 Query: 166 ----TNFADLSSKIALLSSAMDVPLLLKE---------VGCGLSSMDIELGLKS----GI 208 A + ++ ++S D+ L++E +G L + D+E L++ G+ Sbjct: 233 GLRPGEEAVIHTRFPQVASPDDLARLVEELRRMTGGVPIGVKLCAGDLEADLRAAVAAGV 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVF--QDWGIPTPLSLEMARPYCNE------AQ 260 + I G G++ G +F D+G+P ++ A E Sbjct: 293 DFISIDGAKGSTGK------------GYLFTINDFGLPVVYAIPEADRILRELGVRDRIT 340 Query: 261 FIASGGLRNGVDILKSIILGA 281 IASGGLR+G D LK++ LGA Sbjct: 341 LIASGGLRDGADFLKAMALGA 361 >gi|302889407|ref|XP_003043589.1| hypothetical protein NECHADRAFT_88152 [Nectria haematococca mpVI 77-13-4] gi|256724506|gb|EEU37876.1| hypothetical protein NECHADRAFT_88152 [Nectria haematococca mpVI 77-13-4] Length = 377 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 26/134 (19%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D EL +K G+ ++ GG R L+S P SL++ R Sbjct: 242 DAELAIKHGLDGIVVSNHGG---------RQLDS------------VPASLDVLREVVPI 280 Query: 259 AQ----FIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFI 313 A+ GG+R G DI K++ LGA P + A + V A+ L EF Sbjct: 281 AKGHIPIAVDGGIRRGTDIFKALALGADFCLAGRPAIWGLAYNGEKGVELALNLLYDEFK 340 Query: 314 VSMFLLGTKRVQEL 327 M L G K V E+ Sbjct: 341 TCMALAGCKNVNEI 354 >gi|156058067|ref|XP_001594957.1| hypothetical protein SS1G_04765 [Sclerotinia sclerotiorum 1980] gi|154702550|gb|EDO02289.1| hypothetical protein SS1G_04765 [Sclerotinia sclerotiorum 1980 UF-70] Length = 509 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPA 294 D P +L + YC E + GG++ G D++K++ LGA G+ + Sbjct: 385 DTAPPAIHTLMEIQKYCPEVLSRIEVWVDGGIKRGTDVVKALCLGAKAVGVGRAALFGLG 444 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V E L+ E M LLG +++ EL Sbjct: 445 AGGPEGVERTFEILKSEMETCMRLLGVEKISEL 477 >gi|87118355|ref|ZP_01074254.1| putative glutamate synthetase [Marinomonas sp. MED121] gi|86165989|gb|EAQ67255.1| putative glutamate synthetase [Marinomonas sp. MED121] Length = 515 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D++ L +G Y + GRGG + + E RD S +PT +L AR +E Sbjct: 334 DMQFALDAGADYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARRLLDE 383 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 I +GG+R +D +K++ LGA Sbjct: 384 QGKSGQVTLIITGGIRTPIDFVKAMALGA 412 >gi|269218477|ref|ZP_06162331.1| L-lactate dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211588|gb|EEZ77928.1| L-lactate dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332] Length = 421 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L + R + + G+ NG DI+ S+ LGA + +L M A Sbjct: 309 PVPFHLLPHVVREVGKDTAVMVDTGIMNGADIVASVALGADFALIGRAYLYGLMAGGRAG 368 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V I LR E + +M LLG + EL Sbjct: 369 VDRTIAILRDELVRTMKLLGVSSIAEL 395 >gi|46204146|ref|ZP_00050434.2| COG0069: Glutamate synthase domain 2 [Magnetospirillum magnetotacticum MS-1] Length = 401 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 27/128 (21%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG D L +KSG + G +GGT+ + Sbjct: 134 TGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAVKSGADVVVLDGMQGGTAAT 192 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIPT L RP + Q I SGG+R+G D+ Sbjct: 193 Q-----------DVFIEHVGIPT---LAAIRPAVQALQDLGMHRKVQLIVSGGIRSGADV 238 Query: 274 LKSIILGA 281 K++ LGA Sbjct: 239 AKALALGA 246 >gi|56695715|ref|YP_166066.1| L-lactate dehydrogenase, putative [Ruegeria pomeroyi DSS-3] gi|56677452|gb|AAV94118.1| L-lactate dehydrogenase, putative [Ruegeria pomeroyi DSS-3] Length = 387 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%) Query: 266 GLRNGVDILKSIILGA--SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA ++ G A + AM V A+E +RKE +M L G + Sbjct: 309 GIRSGQDVLKALALGAKGTMIGRAFVYGLGAM-GQKGVTTALEVIRKELDTTMALCGERN 367 Query: 324 VQELYLNTALI 334 V +L + L+ Sbjct: 368 VADLGRHNLLV 378 >gi|134299120|ref|YP_001112616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum reducens MI-1] gi|134051820|gb|ABO49791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum reducens MI-1] Length = 340 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 21/155 (13%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 +I L +A +P +LK + ++ + E+ +++G+ ++ GG RI +D Sbjct: 197 EIKELVNATKLPFILKGI---MTVDEAEMAVEAGVSAIVVSNHGG----RILDFTPGAAD 249 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + +P +A + +A GG+R GVD+LK + LGA + P + Sbjct: 250 V--------LPA-----IAAAVKGKVTILADGGVRTGVDVLKLLALGADGVLVGRPLVVG 296 Query: 294 AMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A ++ V IE + E +M L G ++E+ Sbjct: 297 AFGGHTEGVKFLIEKMTSELKQAMILTGCNTIKEI 331 >gi|84687807|ref|ZP_01015677.1| glycolate oxidase [Maritimibacter alkaliphilus HTCC2654] gi|84664179|gb|EAQ10673.1| glycolate oxidase [Rhodobacterales bacterium HTCC2654] Length = 381 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN FD L+ + L DE+D SVE +G+KL+ P +S T R R +A Sbjct: 40 RNSDSFDQVDLLPKVLR--GTDEIDLSVEIMGQKLALPFYLSP-TALQRLFHHRGERAVA 96 Query: 81 IAAEKTKVAMAVGS 94 AAEK V S Sbjct: 97 AAAEKYGTMFGVSS 110 >gi|298528158|ref|ZP_07015562.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfonatronospira thiodismutans ASO3-1] gi|298511810|gb|EFI35712.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfonatronospira thiodismutans ASO3-1] Length = 340 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 23/156 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +I L + D+P +LK G+ ++D L L++G+ ++ GG R+ H + Sbjct: 197 EIKELVQSTDLPFVLK----GIMTIDDALDALEAGVSTIVVSNHGG----RVLDHTPGAA 248 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ P EM R IA GG+R+G D++K + LGA + P + Sbjct: 249 EV----------LPEISEMVR---GRMTIIADGGVRSGSDVIKLLALGADAVLVGRPLIT 295 Query: 293 PAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V + +E I +M L G V+++ Sbjct: 296 GAFGGGKEGVSFVLNKYTQELIQAMLLTGVPDVEKV 331 >gi|157149221|ref|YP_001456540.1| L-lactate dehydrogenase [Citrobacter koseri ATCC BAA-895] gi|166990699|sp|A8ARJ1|LLDD_CITK8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|157086426|gb|ABV16104.1| hypothetical protein CKO_05061 [Citrobacter koseri ATCC BAA-895] Length = 396 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + A VA + L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|218459674|ref|ZP_03499765.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli Kim 5] Length = 145 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 73 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETMRTEIERGMKLMGCTS 132 Query: 324 VQEL 327 V +L Sbjct: 133 VDQL 136 >gi|255084986|ref|XP_002504924.1| glycolate oxidase [Micromonas sp. RCC299] gi|226520193|gb|ACO66182.1| glycolate oxidase [Micromonas sp. RCC299] Length = 374 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + GG++ G D+LK + +GA + P+L +A V A + L E +M LLG Sbjct: 272 VVDGGVQRGTDVLKGLAMGADAVAIGKPYLYGLCAGGEAGVRKAFDVLTDELERAMGLLG 331 Query: 321 TKRVQELYLNTA 332 V+EL A Sbjct: 332 VGTVRELRARMA 343 >gi|15891091|ref|NP_356763.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15159430|gb|AAK89548.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 381 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 310 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRIEIERGMKLMGCTT 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDQL 373 >gi|325294718|ref|YP_004281232.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065166|gb|ADY73173.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 505 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 16/25 (64%), Positives = 19/25 (76%) Query: 257 NEAQFIASGGLRNGVDILKSIILGA 281 NE IA+GG RN VD+LK+I LGA Sbjct: 378 NEVSLIAAGGFRNAVDVLKAIALGA 402 >gi|310815224|ref|YP_003963188.1| Lactate dehydrogenase [Ketogulonicigenium vulgare Y25] gi|308753959|gb|ADO41888.1| Lactate dehydrogenase [Ketogulonicigenium vulgare Y25] Length = 387 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLR 309 + R + + G+R+G D+LK++ LGA + ++ + V A++ +R Sbjct: 294 IVRAVGDRTEVWLDSGIRSGQDVLKALALGAKATMIGRSYIYGLGAYGEEGVTMALDIIR 353 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 +E V+M L+G + V++L + L+ Sbjct: 354 RELDVTMALVGKRDVRDLNRDVLLV 378 >gi|224117076|ref|XP_002317470.1| predicted protein [Populus trichocarpa] gi|118489504|gb|ABK96554.1| unknown [Populus trichocarpa x Populus deltoides] gi|222860535|gb|EEE98082.1| predicted protein [Populus trichocarpa] Length = 369 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR+EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLASEGEAGVRKVLQMLREEFELTMALSGCRS 345 Query: 324 VQEL 327 ++E+ Sbjct: 346 LKEI 349 >gi|84386711|ref|ZP_00989737.1| glutamate synthase domain protein [Vibrio splendidus 12B01] gi|84378517|gb|EAP95374.1| glutamate synthase domain protein [Vibrio splendidus 12B01] Length = 520 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 336 DIQFALDASADYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDK 385 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 I +GGLR +D +K++ LGA Sbjct: 386 QGVSDRVTLIITGGLRVPMDFVKAMALGA 414 >gi|218710117|ref|YP_002417738.1| putative glutamate synthetase [Vibrio splendidus LGP32] gi|218323136|emb|CAV19313.1| putative glutamate synthetase [Vibrio splendidus LGP32] Length = 520 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 336 DIQFALDASADYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDK 385 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 I +GGLR +D +K++ LGA Sbjct: 386 QGVSDRVTLIITGGLRVPMDFVKAMALGA 414 >gi|15964207|ref|NP_384560.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15073383|emb|CAC41891.1| Putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] Length = 403 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG++ G +LK++ LGA GL +L P + A V A+E +R E M L+G Sbjct: 332 GGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQAGVERALELMRVEIERGMKLMGCSS 391 Query: 324 VQEL 327 V EL Sbjct: 392 VDEL 395 >gi|114581940|ref|XP_001154673.1| PREDICTED: phosphodiesterase 11A isoform 1 [Pan troglodytes] Length = 681 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 14/102 (13%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N I+Q G+ FA+LSSK D+ LLK+ + + D+ L + +F Sbjct: 487 HFNHAVMILQSEGHNIFANLSSK-----EYSDLMQLLKQ---SILATDLTLYFERRTEFF 538 Query: 212 DIAGRGGTSWSRIESHRD-----LESDIGIVFQDWGIPTPLS 248 ++ +G W+ I++HRD L G+V W + ++ Sbjct: 539 ELVSKGEYDWN-IKNHRDIFRGLLMPQCGVVSGPWQLQNQVA 579 >gi|108803893|ref|YP_643830.1| lactate 2-monooxygenase [Rubrobacter xylanophilus DSM 9941] gi|108765136|gb|ABG04018.1| Lactate 2-monooxygenase [Rubrobacter xylanophilus DSM 9941] Length = 431 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+ K++ LGA+ L P++ A+ V +E++ EF ++M L G + V Sbjct: 352 GIRGGADVFKALALGATAVCLGRPYVYGLALAGERGVAEVVENVLAEFDLTMGLAGCRSV 411 Query: 325 QEL 327 E+ Sbjct: 412 AEI 414 >gi|147789143|emb|CAN60338.1| hypothetical protein VITISV_031317 [Vitis vinifera] Length = 364 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 235 GIVFQDWG------IPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 GI+ + G +P +S E+ R + GG+R G D+ K++ LGA + Sbjct: 247 GIIVSNHGARQLDYVPATISALEEVVRAVGGRVPVLLDGGIRRGTDVFKTLALGAQAVLV 306 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P + A D V +E L+ E ++M L G V+++ Sbjct: 307 GRPVIYGLAAKGEDGVRRVLEMLKDELEITMALSGCSSVKDI 348 >gi|89055612|ref|YP_511063.1| ferredoxin-dependent glutamate synthase [Jannaschia sp. CCS1] gi|88865161|gb|ABD56038.1| ferredoxin-dependent glutamate synthase [Jannaschia sp. CCS1] Length = 535 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 14/87 (16%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L+ G+ Y + GRGG + + RD S +PT +L AR + ++ Sbjct: 359 DIDAALEVGVDYIILDGRGGGTGAAPTLFRDNIS----------VPTIPALARARRHLDK 408 Query: 259 AQ----FIASGGLRNGVDILKSIILGA 281 Q + +GGLR D +K++ +GA Sbjct: 409 TQPDVSLVITGGLRTAPDFIKALAMGA 435 >gi|325526165|gb|EGD03809.1| putative L(+)-mandelate dehydrogenase [Burkholderia sp. TJI49] Length = 388 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSS 298 G +PL + ++ R + + G R G D+LK++ +GA + + PF A+ Sbjct: 291 GAVSPLRILPDVVRALGADYPVMIDSGFRRGSDVLKAVAMGARMVFVGRPFNYAAAVGGE 350 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V+ AI LR E +M +LG ++ EL Sbjct: 351 AGVLHAIGLLRDEVDRNMAMLGVEQCSEL 379 >gi|239995812|ref|ZP_04716336.1| (S)-2-hydroxy-acid oxidase [Alteromonas macleodii ATCC 27126] Length = 365 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA + +P++LK + L+ +D + + G+ ++ GG + + S ++ + Sbjct: 223 IAFIQQHTSLPIVLKGI---LNPLDAQKAAELGVAGIVVSNHGGRALDSVPSPVEM---L 276 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 I+ Q G +E +A G+R G D++K + LGA+ + P + Sbjct: 277 PIIRQTVG--------------DEMMVLADSGVRRGADVVKLMALGANAVLIGRPLMYGL 322 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V I LR E ++M L G ++E+ Sbjct: 323 ATAGALGVAHTIRLLRDELEMTMALCGVGSIEEI 356 >gi|170744680|ref|YP_001773335.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium sp. 4-46] gi|168198954|gb|ACA20901.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium sp. 4-46] Length = 391 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 31/149 (20%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL+LK + L D EL +SG + ++ GG R L+ G P Sbjct: 254 PLILKGI---LDPEDAELAARSGAQALIVSNHGG---------RQLD----------GAP 291 Query: 245 TPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 + ++ A P EA + + GG+R+G D++K++ LGA + FL + Sbjct: 292 SSIT---ALPAIAEAVGSRIEVLMDGGIRSGQDVIKALALGAKGVFIGRAFLYGLGAGGE 348 Query: 300 A-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V ++ +RKE +M + G + V+ + Sbjct: 349 AGVTQCLDIIRKELDTTMAMCGLRDVKAV 377 >gi|260774228|ref|ZP_05883143.1| L-lactate dehydrogenase [Vibrio metschnikovii CIP 69.14] gi|260611189|gb|EEX36393.1| L-lactate dehydrogenase [Vibrio metschnikovii CIP 69.14] Length = 378 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 247 LSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDA 300 LS A P +A + + G+R+G+D+++ + LGA L F+ A Sbjct: 284 LSTAQALPSIADAVKGDLKILVDSGIRSGLDVVRMLALGADCTLLGRAFIYALAAQGQAG 343 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V ++ KE V+M L G KRVQ+L ++ + R Sbjct: 344 VEHLLDLFDKEMRVAMTLTGAKRVQDLSRDSLVNR 378 >gi|164688554|ref|ZP_02212582.1| hypothetical protein CLOBAR_02199 [Clostridium bartlettii DSM 16795] gi|164602967|gb|EDQ96432.1| hypothetical protein CLOBAR_02199 [Clostridium bartlettii DSM 16795] Length = 339 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 ++A+ + + +A GG+R GVD+LK I LGA + PF+ + S+ V + + Sbjct: 253 QIAKAVKGKTKILADGGVRTGVDVLKLIALGADGVLIGRPFVTASFGGGSEGVELYVNKI 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M L G + ++ Sbjct: 313 ISELEATMRLTGCATIADI 331 >gi|86147017|ref|ZP_01065335.1| glutamate synthase domain protein [Vibrio sp. MED222] gi|85835267|gb|EAQ53407.1| glutamate synthase domain protein [Vibrio sp. MED222] Length = 520 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 336 DIQFALDASADYIILDGRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDK 385 Query: 259 ------AQFIASGGLRNGVDILKSIILGA 281 I +GGLR +D +K++ LGA Sbjct: 386 QGVSGRVTLIITGGLRVPMDFVKAMALGA 414 >gi|90419859|ref|ZP_01227768.1| putative L-lactate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90335900|gb|EAS49648.1| putative L-lactate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 414 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSS 298 D+ + +L + + + GG+R G D+LK+I LGA + PFL A+ Sbjct: 313 DYAVSAIAALPAVKAEAGDMAVMLDGGVRRGSDVLKAIALGAEFVFVGRPFLFAAAVAGD 372 Query: 299 DAVVAAIESLRKEFIVSMFLLGT 321 D V A+ L E M ++G Sbjct: 373 DGVKHAVSLLAAEIDRDMAMIGA 395 >gi|92112537|ref|YP_572465.1| L-lactate dehydrogenase [Chromohalobacter salexigens DSM 3043] gi|122420794|sp|Q1R0J2|LLDD_CHRSD RecName: Full=L-lactate dehydrogenase [cytochrome] gi|91795627|gb|ABE57766.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Chromohalobacter salexigens DSM 3043] Length = 392 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA-IESLRKEFIVSMFLL 319 +A G+RNG+D+++ I +GA L ++ + +A VA +E KE V+M L Sbjct: 303 ILADSGVRNGLDVVRMIAMGADTILLGRAYIYALATAGEAGVAHLLELFEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 G + + EL Sbjct: 363 GARSIAEL 370 >gi|300023345|ref|YP_003755956.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hyphomicrobium denitrificans ATCC 51888] gi|299525166|gb|ADJ23635.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hyphomicrobium denitrificans ATCC 51888] Length = 382 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVS 315 +E + + GG+R+G D+ +++ LGA L +L + + V AIE + KE V+ Sbjct: 302 SETEILFDGGIRSGQDVFRALALGARGCLLGRAYLYGVCAAGEEGVTKAIEIIAKELDVT 361 Query: 316 MFLLGTKRVQEL 327 M L G + + ++ Sbjct: 362 MALAGLRTIADI 373 >gi|237728907|ref|ZP_04559388.1| L-lactate dehydrogenase [Citrobacter sp. 30_2] gi|226909529|gb|EEH95447.1| L-lactate dehydrogenase [Citrobacter sp. 30_2] Length = 396 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|118486419|gb|ABK95049.1| unknown [Populus trichocarpa] Length = 267 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ LR+EF ++M L G + Sbjct: 184 GGVRRGTDVFKALALGASGIFIGRPVVFSLASEGEAGVRKVLQMLREEFELTMALSGCRS 243 Query: 324 VQEL 327 ++E+ Sbjct: 244 LKEI 247 >gi|154298987|ref|XP_001549914.1| L-lactate ferricytochrome c oxidoreductase [Botryotinia fuckeliana B05.10] gi|150857509|gb|EDN32701.1| L-lactate ferricytochrome c oxidoreductase [Botryotinia fuckeliana B05.10] Length = 509 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 255 YCNEA----QFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLR 309 YC E + GG++ G D++K++ LGA G+ + + V E L+ Sbjct: 400 YCPEVLSRIEVWVDGGIKRGTDVVKALCLGAKAVGVGRAALFGLGAGGPEGVERTFEILK 459 Query: 310 KEFIVSMFLLGTKRVQEL 327 E M LLG +++ EL Sbjct: 460 AEMETCMRLLGVEKISEL 477 >gi|158423891|ref|YP_001525183.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158330780|dbj|BAF88265.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 382 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A + + + GG+R G D+LK++ LGA + +L A V +E L Sbjct: 293 EIASAVGSRTEILLDGGIRTGQDVLKALALGARGCLIGRSWLYGLAAGGQGGVTQVLEIL 352 Query: 309 RKEFIVSMFLLGTKRVQEL 327 RKE SM L G V+ + Sbjct: 353 RKELDTSMALAGLTDVRSV 371 >gi|301782817|ref|XP_002926824.1| PREDICTED: hydroxyacid oxidase 1-like [Ailuropoda melanoleuca] Length = 370 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLASQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVR 361 >gi|242046292|ref|XP_002461017.1| hypothetical protein SORBIDRAFT_02g039250 [Sorghum bicolor] gi|241924394|gb|EER97538.1| hypothetical protein SORBIDRAFT_02g039250 [Sorghum bicolor] Length = 342 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P+LLK + +++ D +++G+ ++ GG R L Sbjct: 196 LKSITSLPILLKGI---ITAEDARKAVEAGVSGVILSNHGG---------RQL------- 236 Query: 238 FQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 D+ T +LE + + + GG+R G D+LK++ LGA + P L Sbjct: 237 --DYAPATISALEEVVKAVEGSVPVLVDGGIRRGTDVLKALALGAKAVMVGRPVLYGLAA 294 Query: 297 SSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A IE L KE ++M L G + V E+ Sbjct: 295 RGEAGARHVIEMLNKELELAMALCGCRSVAEV 326 >gi|73991331|ref|XP_542897.2| PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 1 [Canis familiaris] Length = 370 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDALPEIVEAVEGKVEIFLDGGVRKGTDVLKALALGAKAVFVGRPVIWGLASQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|73991333|ref|XP_859787.1| PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 2 [Canis familiaris] Length = 375 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 10/103 (9%) Query: 242 GIPTPLSLEMA-------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 G+P + L++ R + + GG+R G D+LK++ LGA + P + Sbjct: 267 GVPATVKLQIEFMSIVKRRFLDRKVEIFLDGGVRKGTDVLKALALGAKAVFVGRPVIWGL 326 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 ASQGEKGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 367 >gi|149733085|ref|XP_001493881.1| PREDICTED: hydroxyacid oxidase (glycolate oxidase) 1 [Equus caballus] Length = 370 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 267 GVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLASQGE 326 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 327 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 362 >gi|302337986|ref|YP_003803192.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirochaeta smaragdinae DSM 11293] gi|301635171|gb|ADK80598.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirochaeta smaragdinae DSM 11293] Length = 338 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLL 319 + GG+R+G+D+ K + LGA + P A+ A V + E+L++E +M + Sbjct: 265 LLVDGGIRSGIDLFKMLALGADFALIGRPVAVAALGGGRAAVRTLMETLQQELYRTMVMT 324 Query: 320 GTKRVQEL 327 G + E+ Sbjct: 325 GCASLSEI 332 >gi|209518694|ref|ZP_03267511.1| ferredoxin-dependent glutamate synthase [Burkholderia sp. H160] gi|209500893|gb|EEA00932.1| ferredoxin-dependent glutamate synthase [Burkholderia sp. H160] Length = 453 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL+ KI L D P+ +K VG + D++L + +G I G +GGT+ ++ Sbjct: 212 DLAIKIQELREITDWEKPIYVK-VGATRTFNDVKLAVHAGADVVVIDGMQGGTAATQT-- 268 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILKSIILG 280 ++ GIPT ++ A + Q I SGG+R G D+ K++ LG Sbjct: 269 ---------CFIENVGIPTLAAVRQAVDALEDLNMKGQVQLIVSGGIRTGADVAKALALG 319 Query: 281 A 281 A Sbjct: 320 A 320 >gi|146309797|ref|YP_001174871.1| L-lactate dehydrogenase [Enterobacter sp. 638] gi|166990703|sp|A4W540|LLDD_ENT38 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|145316673|gb|ABP58820.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterobacter sp. 638] Length = 395 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKTISEI 370 >gi|325579252|ref|ZP_08149208.1| L-lactate dehydrogenase [Haemophilus parainfluenzae ATCC 33392] gi|325159487|gb|EGC71621.1| L-lactate dehydrogenase [Haemophilus parainfluenzae ATCC 33392] Length = 389 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 245 TPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 TP S A PY +A + +A G+RNG+D+++ I LGA + F+ D Sbjct: 292 TP-STAQALPYVADAVKGNIKILADSGIRNGLDVVRMIALGADATMIGRSFVYALGADGQ 350 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ KE V+M L K + ++ Sbjct: 351 RGVENMLDIFHKEMRVAMTLTSNKNITDI 379 >gi|115473355|ref|NP_001060276.1| Os07g0616500 [Oryza sativa Japonica Group] gi|75329161|sp|Q8H3I4|GLO4_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; AltName: Full=Glycolate oxidase 4; Short=GOX 4; Short=OsGLO4; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO4 gi|33146942|dbj|BAC79990.1| putative (S)-2-hydroxy-acid oxidase [Oryza sativa Japonica Group] gi|113611812|dbj|BAF22190.1| Os07g0616500 [Oryza sativa Japonica Group] gi|215701239|dbj|BAG92663.1| unnamed protein product [Oryza sativa Japonica Group] Length = 366 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDS 297 D+ T +LE + R + GG+R G D+ K++ LGA + P F A Sbjct: 261 DYAPATIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAVMVGRPVFFGLAARG 320 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 IE L E V+M L G + V E+ Sbjct: 321 EAGARHVIEMLNGELEVAMALCGCRSVGEI 350 >gi|283835988|ref|ZP_06355729.1| L-lactate dehydrogenase [Citrobacter youngae ATCC 29220] gi|291068168|gb|EFE06277.1| L-lactate dehydrogenase [Citrobacter youngae ATCC 29220] Length = 408 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|297790174|ref|XP_002862992.1| hypothetical protein ARALYDRAFT_333142 [Arabidopsis lyrata subsp. lyrata] gi|297839705|ref|XP_002887734.1| hypothetical protein ARALYDRAFT_895734 [Arabidopsis lyrata subsp. lyrata] gi|297308786|gb|EFH39251.1| hypothetical protein ARALYDRAFT_333142 [Arabidopsis lyrata subsp. lyrata] gi|297333575|gb|EFH63993.1| hypothetical protein ARALYDRAFT_895734 [Arabidopsis lyrata subsp. lyrata] Length = 369 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + V ++ +R+EF ++M L G Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMMREEFELTMALSGCTS 345 Query: 324 VQELYLN 330 ++E+ N Sbjct: 346 LKEITRN 352 >gi|153869759|ref|ZP_01999291.1| Glutamate synthase (NADPH) [Beggiatoa sp. PS] gi|152073779|gb|EDN70713.1| Glutamate synthase (NADPH) [Beggiatoa sp. PS] Length = 537 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN- 257 DIE L+ G+ Y + GRGG + + RD S +PT +L AR Y + Sbjct: 360 DIEAALQIGVDYIILDGRGGGTGAAPLLFRDNIS----------VPTIPALARARRYLDK 409 Query: 258 ----EAQFIASGGLRNGVDILKSIILGA 281 + + +GGLR VD +K++ LGA Sbjct: 410 KGRRDVSLVITGGLRLPVDFVKALALGA 437 >gi|90761110|gb|ABD97860.1| glycolate oxidase [Pachysandra terminalis] Length = 186 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDS 297 D+ T ++LE + + GG+R G D+ K++ LGAS + P L A + Sbjct: 77 DYSPATIMALEEVVKAAQGRVPVFVDGGIRRGTDVFKALALGASGIFIGRPVLFALAAEG 136 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V ++ L EF ++M L G + ++E+ N Sbjct: 137 EAGVRKVLQMLHDEFELTMALSGCRSLKEITRN 169 >gi|73541351|ref|YP_295871.1| L-lactate dehydrogenase (cytochrome) [Ralstonia eutropha JMP134] gi|72118764|gb|AAZ61027.1| L-lactate dehydrogenase (cytochrome) [Ralstonia eutropha JMP134] Length = 415 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA L PF+ A + + V AI LR E +M +LG V Sbjct: 347 GIRRGGDVLKALALGARFVFLGRPFIYAASVGGPEGVCHAITLLRDEVDRNMAMLGANTV 406 Query: 325 QEL 327 ++ Sbjct: 407 ADV 409 >gi|226500726|ref|NP_001152347.1| hydroxyacid oxidase 1 [Zea mays] gi|195655381|gb|ACG47158.1| hydroxyacid oxidase 1 [Zea mays] Length = 368 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P L A+D V A+ LR E ++M L G Sbjct: 288 GGIRRGTDVFKALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCSS 347 Query: 324 VQEL 327 ++++ Sbjct: 348 LKDI 351 >gi|170690401|ref|ZP_02881568.1| L-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] gi|170144836|gb|EDT12997.1| L-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] Length = 392 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K++ LGA + + P + A+ V A++ LR+E V + LLG R+ Sbjct: 312 GVRRGTDVIKALSLGARMVLVGRPAMYGLAVGGHAGVRHALQLLRREIDVDLALLGCPRI 371 Query: 325 QEL 327 ++L Sbjct: 372 EKL 374 >gi|73991335|ref|XP_859819.1| PREDICTED: similar to hydroxyacid oxidase 1 isoform 3 [Canis familiaris] Length = 363 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + E+ + + GG+R G D+LK++ LGA + P + A Sbjct: 260 GVPATIDALPEIVEAVEGKVEIFLDGGVRKGTDVLKALALGAKAVFVGRPVIWGLASQGE 319 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +E L++EF ++M L G + V+ ++ L+R Sbjct: 320 KGVQDVLEILKEEFRLAMALSGCQNVK--VIDKTLVRK 355 >gi|217978772|ref|YP_002362919.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] gi|217504148|gb|ACK51557.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] Length = 444 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL KI L D P+ +K VG D L +K+G + G +GGT+ + Sbjct: 208 TGPDDLEIKIEELREITDWEKPIYVK-VGASRPYYDTALAVKAGADVIVLDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---------EAQFIASGGLRNGVDI 273 + + + GIP L RP + Q I SGG+RNG D+ Sbjct: 267 Q-----------EVFIEHVGIPI---LAAIRPAVQALQDLGMHRKVQLIVSGGIRNGADV 312 Query: 274 LKSIILGASLGGLASPFL 291 K++ LGA + + + L Sbjct: 313 AKALALGADVASIGTAAL 330 >gi|225680206|gb|EEH18490.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 430 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GG+R G DILK++ LGA+ G+ L + V + ++ E +M L+G + Sbjct: 329 GGIRRGSDILKAVCLGATAVGMGRSVLYATNYGQEGVEHLFDIMKDELEGAMRLVGITSL 388 Query: 325 QELY---LNTALIRH 336 E +NTA I H Sbjct: 389 DEARPELVNTADIDH 403 >gi|212528498|ref|XP_002144406.1| mitochondrial cytochrome b2-like, putative [Penicillium marneffei ATCC 18224] gi|210073804|gb|EEA27891.1| mitochondrial cytochrome b2-like, putative [Penicillium marneffei ATCC 18224] Length = 495 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 19/143 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA + +P+ LK + +S+ D L +K+G+ ++ GG R+L++ Sbjct: 322 IAFVKKHTHLPVCLKGI---MSADDAILAMKAGVDGILLSNHGG---------RNLDTSP 369 Query: 235 GIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + T L L+ P ++ + G+R G DILK++ LGA+ G+ L Sbjct: 370 PSII------TLLELQRRAPEVFDKMEVYVDSGIRRGTDILKAVALGATAVGMGRSMLFA 423 Query: 294 AMDSSDAVVAAIESLRKEFIVSM 316 + V I+ +R E +M Sbjct: 424 TNYGQEGVEHLIDIMRDELETAM 446 >gi|254473789|ref|ZP_05087184.1| ferredoxin-dependent glutamate synthase [Pseudovibrio sp. JE062] gi|211957175|gb|EEA92380.1| ferredoxin-dependent glutamate synthase [Pseudovibrio sp. JE062] Length = 538 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 64/269 (23%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L PL +S M+ G +E K+A+A G++ V + + Sbjct: 204 RLQIPLFVSDMSFG-------------ALSEPAKIALARGAESVGTGICSGEGGMLPEEQ 250 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHL---------------N 154 A ++ L + + + + + QA H G G HL N Sbjct: 251 AENSRYFYELASARFGFSWEQLERVQAFHFKGGQAAKTGTGGHLPAAKVTEKIAAVRGLN 310 Query: 155 P---------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 P E ++P+ NFAD + +P+ K + DI+ L+ Sbjct: 311 PGEGAISPARFPEWMKPSDFRNFAD-----EVRDRTGGIPIGFK-LSAQHIEKDIDAALE 364 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYCNEA----- 259 G+ Y + GRGG + + +VF+D +PT +L AR + + + Sbjct: 365 VGVDYIILDGRGGGTGASP-----------LVFRDNISVPTIPALARARRHLDRSGQRDV 413 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLAS 288 + +GGLR D +K++ LGA LA+ Sbjct: 414 TLVITGGLRKPEDFVKAMALGADAVALAN 442 >gi|251793699|ref|YP_003008429.1| L-lactate dehydrogenase [Aggregatibacter aphrophilus NJ8700] gi|247535096|gb|ACS98342.1| L-lactate dehydrogenase (cytochrome) [Aggregatibacter aphrophilus NJ8700] Length = 381 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + + GG+RNG+D+++ + LGA + PF+ D V ++ +KE V++ L Sbjct: 302 KILVDGGIRNGLDVVRMMALGADATMIGRPFVYALGADGQRGVENLLDIFKKEMRVALTL 361 Query: 319 LGTKRVQEL 327 TK + + Sbjct: 362 TSTKDISNI 370 >gi|194704500|gb|ACF86334.1| unknown [Zea mays] Length = 368 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P L A+D V A+ LR E ++M L G Sbjct: 288 GGIRRGTDVFKALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCAS 347 Query: 324 VQEL 327 ++++ Sbjct: 348 LKDI 351 >gi|194694808|gb|ACF81488.1| unknown [Zea mays] Length = 366 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P L A+D V A+ LR E ++M L G Sbjct: 286 GGIRRGTDVFKALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCAS 345 Query: 324 VQEL 327 ++++ Sbjct: 346 LKDI 349 >gi|254550883|ref|ZP_05141330.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 414 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|121610027|ref|YP_997834.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Verminephrobacter eiseniae EF01-2] gi|121554667|gb|ABM58816.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Verminephrobacter eiseniae EF01-2] Length = 395 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLL 319 + GG+R G D+LK++ LGAS + P L ++ A VA + LR E ++M L Sbjct: 303 LLVDGGIRRGTDVLKAMALGASAVLIGRPALYGLANAGAAGVAHVLRLLRDELEIAMALT 362 Query: 320 GTKRVQE 326 G + E Sbjct: 363 GCATLAE 369 >gi|15609009|ref|NP_216388.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium tuberculosis H37Rv] gi|15841341|ref|NP_336378.1| L-lactate dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|148661678|ref|YP_001283201.1| L-lactate dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148823083|ref|YP_001287837.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis F11] gi|167970354|ref|ZP_02552631.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis H37Ra] gi|253799084|ref|YP_003032085.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 1435] gi|254232049|ref|ZP_04925376.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis C] gi|254364693|ref|ZP_04980739.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis str. Haarlem] gi|289554354|ref|ZP_06443564.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 605] gi|297634433|ref|ZP_06952213.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 4207] gi|297731420|ref|ZP_06960538.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN R506] gi|306776092|ref|ZP_07414429.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu001] gi|306779872|ref|ZP_07418209.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu002] gi|306784615|ref|ZP_07422937.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu003] gi|306788977|ref|ZP_07427299.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu004] gi|306793313|ref|ZP_07431615.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu005] gi|306797690|ref|ZP_07435992.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu006] gi|306803579|ref|ZP_07440247.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu008] gi|306808153|ref|ZP_07444821.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu007] gi|306967967|ref|ZP_07480628.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu009] gi|306972202|ref|ZP_07484863.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu010] gi|307079911|ref|ZP_07489081.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu011] gi|307084489|ref|ZP_07493602.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu012] gi|313658754|ref|ZP_07815634.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN V2475] gi|81671710|sp|P95143|LLDD2_MYCTU RecName: Full=Putative L-lactate dehydrogenase [cytochrome] 2 gi|3261680|emb|CAB06144.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD2 [Mycobacterium tuberculosis H37Rv] gi|13881574|gb|AAK46192.1| L-lactate dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|124601108|gb|EAY60118.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis C] gi|134150207|gb|EBA42252.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis str. Haarlem] gi|148505830|gb|ABQ73639.1| L-lactate dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148721610|gb|ABR06235.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis F11] gi|253320587|gb|ACT25190.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 1435] gi|289438986|gb|EFD21479.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 605] gi|308215463|gb|EFO74862.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu001] gi|308327233|gb|EFP16084.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu002] gi|308330656|gb|EFP19507.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu003] gi|308334502|gb|EFP23353.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu004] gi|308338295|gb|EFP27146.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu005] gi|308341985|gb|EFP30836.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu006] gi|308345466|gb|EFP34317.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu007] gi|308349768|gb|EFP38619.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu008] gi|308354408|gb|EFP43259.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu009] gi|308358341|gb|EFP47192.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu010] gi|308362244|gb|EFP51095.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu011] gi|308365920|gb|EFP54771.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu012] gi|323719613|gb|EGB28736.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CDC1551A] gi|328458839|gb|AEB04262.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 4207] Length = 414 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|260186837|ref|ZP_05764311.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis CPHL_A] gi|289447486|ref|ZP_06437230.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CPHL_A] gi|289420444|gb|EFD17645.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CPHL_A] Length = 414 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|218753579|ref|ZP_03532375.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] gi|289762022|ref|ZP_06521400.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] gi|289709528|gb|EFD73544.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] Length = 414 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|299532504|ref|ZP_07045894.1| L-lactate dehydrogenase [Comamonas testosteroni S44] gi|298719451|gb|EFI60418.1| L-lactate dehydrogenase [Comamonas testosteroni S44] Length = 377 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + +A G+RNG+DI++ + LGA + F+ A + V + L KE V+ Sbjct: 299 GQIKILADSGVRNGLDIVRLLALGADCTMIGRAFVYALAAEGEAGVTNLLNLLEKEMRVA 358 Query: 316 MFLLGTKRVQEL 327 M L K+V E+ Sbjct: 359 MTLTSVKKVSEI 370 >gi|134074829|emb|CAK38943.1| unnamed protein product [Aspergillus niger] Length = 507 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 N + G+R G DILK++ LGA+ G+ L + V I+ +R E +M Sbjct: 387 NRMEVYVDSGIRRGTDILKAVCLGATAVGMGRSMLFATNYGQEGVEHLIDIMRDELETAM 446 Query: 317 FLLGTKRVQEL---YLNTALIRH 336 +G + E +NT I H Sbjct: 447 RNVGITSLDEAGPHLVNTGDIDH 469 >gi|302392732|ref|YP_003828552.1| ferredoxin-dependent glutamate synthase [Acetohalobium arabaticum DSM 5501] gi|302204809|gb|ADL13487.1| ferredoxin-dependent glutamate synthase [Acetohalobium arabaticum DSM 5501] Length = 471 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 91/254 (35%), Gaps = 46/254 (18%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA------IKS 107 KL P+L++ M+ G +N +A+A A S D I Sbjct: 111 KLELPILLAGMSYGGAL---SLNAKVALARASAMAGTATNSGEAPLIDEEREEADYFIGQ 167 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKA--------------HQAVHVLGADGLFLHL 153 + + +S L A+++ G Q A QA + + +H Sbjct: 168 YNRGGWMNQPEQLSRLDAIEIQLGQGAQAAAPMGMSPTQIGEDLRQAKDLEPGEKAVIHT 227 Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 L E+ QP+ D + L VP+ LK ++E+ +K+G+ Y I Sbjct: 228 R-LSEMKQPS------DFFEIVQQLRDEYGVPVGLKFCATHYLEQELEIAVKAGVDYVVI 280 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGL 267 G + + +D D G+PT +L A + E IASGGL Sbjct: 281 DGAEAGTHGGPTTLQD----------DVGLPTLYALSRAVKFLEEKGVKDRVSVIASGGL 330 Query: 268 RNGVDILKSIILGA 281 LK++ LGA Sbjct: 331 TTPGHFLKALALGA 344 >gi|118469434|ref|YP_886850.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] gi|118170721|gb|ABK71617.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] Length = 387 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG DI+K++ LGA+ G+ P++ A+ D +V + SL E + M + G + Sbjct: 315 GIRNGADIVKALALGATAVGVGRPYVFGLALGGVDGIVHVLRSLLAEADLIMAVDGYPSL 374 Query: 325 QELYLNT 331 +L +T Sbjct: 375 ADLTPDT 381 >gi|50085604|ref|YP_047114.1| putative glutamate synthase large subunit (GlxD) [Acinetobacter sp. ADP1] gi|49531580|emb|CAG69292.1| putative Glutamate synthase, large subunit region 2 FMN-binding (GlxD) [Acinetobacter sp. ADP1] Length = 444 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KIA + D P+ +K +G D++L +K+G + G +GGT+ + Sbjct: 208 TGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQGGTAAT 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIP ++ A E Q I SGG+R G D+ K+ Sbjct: 267 Q-----------EVFIEHVGIPILSAIPQAIQALQEMGMHRKVQLIVSGGIRTGADVAKA 315 Query: 277 IILGA 281 + LGA Sbjct: 316 MALGA 320 >gi|262040657|ref|ZP_06013895.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042021|gb|EEW43054.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 394 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V + + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKSIREI 370 >gi|215403824|ref|ZP_03416005.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis 02_1987] gi|215411542|ref|ZP_03420338.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis 94_M4241A] gi|215446063|ref|ZP_03432815.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T85] gi|289745696|ref|ZP_06505074.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis 02_1987] gi|289757979|ref|ZP_06517357.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T85] gi|294996781|ref|ZP_06802472.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis 210] gi|298525364|ref|ZP_07012773.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis 94_M4241A] gi|289686224|gb|EFD53712.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis 02_1987] gi|289713543|gb|EFD77555.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T85] gi|298495158|gb|EFI30452.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis 94_M4241A] gi|326903474|gb|EGE50407.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis W-148] Length = 414 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|206577634|ref|YP_002236030.1| L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] gi|288933037|ref|YP_003437096.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|290511830|ref|ZP_06551198.1| L-lactate dehydrogenase [Klebsiella sp. 1_1_55] gi|259494985|sp|B5XMV0|LLDD_KLEP3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|206566692|gb|ACI08468.1| L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] gi|288887766|gb|ADC56084.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|289775620|gb|EFD83620.1| L-lactate dehydrogenase [Klebsiella sp. 1_1_55] Length = 394 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V + + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKTIREI 370 >gi|215430777|ref|ZP_03428696.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis EAS054] gi|289753966|ref|ZP_06513344.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis EAS054] gi|289694553|gb|EFD61982.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis EAS054] Length = 414 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|152972455|ref|YP_001337601.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897049|ref|YP_002921795.1| L-lactate dehydrogenase [Klebsiella pneumoniae NTUH-K2044] gi|329996840|ref|ZP_08302599.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] gi|166990706|sp|A6TFK0|LLDD_KLEP7 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|150957304|gb|ABR79334.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549377|dbj|BAH65728.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539251|gb|EGF65279.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] Length = 394 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V + + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKSIREI 370 >gi|321252383|ref|XP_003192388.1| L-lactate dehydrogenase (cytochrome) [Cryptococcus gattii WM276] gi|317458856|gb|ADV20601.1| L-lactate dehydrogenase (cytochrome), putative [Cryptococcus gattii WM276] Length = 593 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 P P RP+ + GG+ G D +K++ LGA+ G FL A+ V Sbjct: 504 PDPQGKPTDRPF----EIWVDGGIWRGSDAVKALCLGANAVGAGRGFLYANAVGGQQGVE 559 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A+ E + +M LLG +V +L Sbjct: 560 HAVNIFSAEILTTMRLLGVNKVDQL 584 >gi|296171499|ref|ZP_06852763.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894061|gb|EFG73822.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 387 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G DI+K++ LGA+ G+ P+ A+ +D VV + SL E + M + G + Sbjct: 316 GIRGGADIVKALALGATAVGVGRPYAYGLALGGTDGVVHVLRSLLAEADLIMAVDGYPTL 375 Query: 325 QELYLNT 331 ++L +T Sbjct: 376 KDLTPDT 382 >gi|302540028|ref|ZP_07292370.1| glutamate synthase [Streptomyces hygroscopicus ATCC 53653] gi|302457646|gb|EFL20739.1| glutamate synthase [Streptomyces himastatinicus ATCC 53653] Length = 439 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%) Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWS 222 T DL+ KI L D P+ +K VG + D++L + +G + G +GGT+ + Sbjct: 204 TGPDDLAIKILELREITDWEKPIYVK-VGATRTYYDVKLAVHAGADVVVVDGMQGGTAAT 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKS 276 + + + GIPT +L A E Q + SGG+R G D+ K+ Sbjct: 263 Q-----------DVFVEHVGIPTLAALPQAVRALQELGVHREVQLVVSGGIRGGADMAKA 311 Query: 277 IILGA 281 + LGA Sbjct: 312 LALGA 316 >gi|31793062|ref|NP_855555.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium bovis AF2122/97] gi|121637775|ref|YP_977998.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|219557820|ref|ZP_03536896.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T17] gi|224990259|ref|YP_002644946.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|260200956|ref|ZP_05768447.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis T46] gi|260205155|ref|ZP_05772646.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis K85] gi|289443349|ref|ZP_06433093.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T46] gi|289569949|ref|ZP_06450176.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T17] gi|289574554|ref|ZP_06454781.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis K85] gi|31618653|emb|CAD94606.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD2 [Mycobacterium bovis AF2122/97] gi|121493422|emb|CAL71895.1| Possible L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773372|dbj|BAH26178.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416268|gb|EFD13508.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T46] gi|289538985|gb|EFD43563.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis K85] gi|289543703|gb|EFD47351.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T17] Length = 414 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAG 369 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V AIE L+ I +M LLG ++EL Sbjct: 370 VNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|311742085|ref|ZP_07715895.1| (S)-2-hydroxy-acid oxidase [Aeromicrobium marinum DSM 15272] gi|311314578|gb|EFQ84485.1| (S)-2-hydroxy-acid oxidase [Aeromicrobium marinum DSM 15272] Length = 345 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + GG+R G D K++ LGA + P L A + SD +E L EF ++ LLG Sbjct: 270 LVDGGVRRGWDAAKALALGADAVMVGRPVLWGLACEGSDGARRVLEQLVTEFDSTLGLLG 329 Query: 321 TKRVQEL 327 R ++L Sbjct: 330 CPRAEDL 336 >gi|115622703|ref|XP_001202514.1| PREDICTED: similar to MGC108441 protein, partial [Strongylocentrotus purpuratus] gi|115631783|ref|XP_796994.2| PREDICTED: similar to MGC108441 protein, partial [Strongylocentrotus purpuratus] Length = 294 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R G DI+K++ LGA + P + A + + ++ L+ EF +M L Sbjct: 187 EVYVDGGVRTGTDIIKALALGARAAFIGRPAVYGIACGGEEGLTDLLDILKDEFSRAMAL 246 Query: 319 LGTKRVQELYLNTALIRHQ 337 G +V++ ++ +L+ H+ Sbjct: 247 SGCAKVED--IDRSLVNHR 263 >gi|304368145|gb|ADM26718.1| glycolate oxidase [Nicotiana benthamiana] Length = 371 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + + ++ LR EF ++M L G + Sbjct: 287 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGIKKVLQMLRDEFELTMALSGCRS 346 Query: 324 VQELYLN 330 + E+ N Sbjct: 347 LNEITRN 353 >gi|319997178|gb|ADV91183.1| mitochondrial cytochrome b2-like protein 1 [Karlodinium micrum] Length = 434 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + GG R G D+ K++ LGA GL P L A + V ++ + E + M L+G Sbjct: 329 LVDGGFRRGSDVFKALALGAKGVGLGRPTLVGMAAYGEEGVEKVVQIFKDEMEMHMRLMG 388 Query: 321 TKRVQELYLNTALIRH 336 T V ++ + R+ Sbjct: 389 TPTVADMVPKMVITRN 404 >gi|238483347|ref|XP_002372912.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] gi|220700962|gb|EED57300.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] Length = 496 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 12/108 (11%) Query: 235 GIVFQDWG------IPTPLSLEMA-RPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 GIV + G + TP+ + + R +C E I GG++ G D++K++ LGA Sbjct: 339 GIVLSNHGGRALDTVSTPVHVLLEIRRFCPEVFDRLDVIVDGGIQRGTDVVKALALGAKA 398 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 G+ L A V ++ L E +M LLG + V +L L Sbjct: 399 VGIGRAALYGLAAGGQSGVERTLQILADETATAMRLLGVQHVDQLSLQ 446 >gi|323492258|ref|ZP_08097416.1| putative glutamate synthetase [Vibrio brasiliensis LMG 20546] gi|323313571|gb|EGA66677.1| putative glutamate synthetase [Vibrio brasiliensis LMG 20546] Length = 511 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L +G Y + GRGG + + RD S +PT +L AR Y ++ Sbjct: 333 DIQFALDAGADYIILDGRGGGTGAAPAMFRDHIS----------VPTIPALARARRYLDQ 382 Query: 259 AQ------FIASGGLRNGVDILKSIILGA 281 I +GGLR +D +K++ LGA Sbjct: 383 QNASGRVTLIITGGLRLPMDFVKAMALGA 411 >gi|197104607|ref|YP_002129984.1| L-lactate dehydrogenase [Phenylobacterium zucineum HLK1] gi|196478027|gb|ACG77555.1| L-lactate dehydrogenase [Phenylobacterium zucineum HLK1] Length = 379 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVS 315 E + GG+R+G+D+LK++ LGA + P+ +A + + L R E V+ Sbjct: 301 GELEVFMDGGVRSGLDVLKALALGAKACFVGRPWAYALGAGGEAAIGKMLGLMRSELAVA 360 Query: 316 MFLLGTKRVQE 326 M L G V+ Sbjct: 361 MILTGCNDVRR 371 >gi|16762615|ref|NP_458232.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144104|ref|NP_807446.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213427160|ref|ZP_03359910.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213647894|ref|ZP_03377947.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289811226|ref|ZP_06541855.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289826011|ref|ZP_06545169.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853191|sp|Q8Z2E5|LLDD_SALTI RecName: Full=L-lactate dehydrogenase [cytochrome] gi|25284061|pir||AH0975 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504920|emb|CAD03300.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139741|gb|AAO71306.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 396 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLT 362 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 363 GAKSISEI 370 >gi|121595780|ref|YP_987676.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax sp. JS42] gi|120607860|gb|ABM43600.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax sp. JS42] Length = 383 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLR 309 +A+ + + + GG+R+GVD+ K++ LGA + P++ A V + + Sbjct: 297 IAQAVGAQTEVLVDGGVRSGVDVFKALALGARGVLIGRPWVWALAAQGEAGVRTLLAQWQ 356 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E +++M L G RV ++ Sbjct: 357 RELLLAMTLAGVTRVADI 374 >gi|297834264|ref|XP_002885014.1| hypothetical protein ARALYDRAFT_478828 [Arabidopsis lyrata subsp. lyrata] gi|297330854|gb|EFH61273.1| hypothetical protein ARALYDRAFT_478828 [Arabidopsis lyrata subsp. lyrata] Length = 363 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGA + P + A D V IE L+ E ++M L G Sbjct: 284 GGVRRGTDVFKALALGAQAVLIGRPIVYGLAAKGEDGVKKVIEMLKNELEITMALSGCPT 343 Query: 324 VQELYLN 330 + ++ N Sbjct: 344 IDDITRN 350 >gi|186470713|ref|YP_001862031.1| ferredoxin-dependent glutamate synthase [Burkholderia phymatum STM815] gi|184197022|gb|ACC74985.1| ferredoxin-dependent glutamate synthase [Burkholderia phymatum STM815] Length = 455 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL KI L D P+ +K VG + D++L + +G + G +GGT+ ++ Sbjct: 213 DLQIKILELREMTDWQTPIYVK-VGATRTFNDVKLAVHAGADVIVVDGMQGGTAATQT-- 269 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILKSIILG 280 ++ GIPT +L A + Q I SGG+R+G D+ K++ +G Sbjct: 270 ---------CFIENVGIPTLAALRQAVDALEDLNMKGQVQLIISGGIRSGADVAKALAMG 320 Query: 281 A 281 A Sbjct: 321 A 321 >gi|311106470|ref|YP_003979323.1| FMN-dependent dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] gi|310761159|gb|ADP16608.1| FMN-dependent dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] Length = 405 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGAS + PF A +A V+ AI LR E +M +LG + Sbjct: 333 GVRRGSDVLKALALGASFVFVGRPFNYAAAVGGEAGVSHAIGLLRAEIDRNMAMLGINNL 392 Query: 325 QEL 327 +E+ Sbjct: 393 REM 395 >gi|2501812|gb|AAB80700.1| glycolate oxidase [Arabidopsis thaliana] Length = 259 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LG S + P + A + V ++ LR EF ++M L G + Sbjct: 178 GGVRRGTDVFKALALGTSGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRS 237 Query: 324 VQELYLN 330 + E+ N Sbjct: 238 ISEITRN 244 >gi|302525297|ref|ZP_07277639.1| L-lactate oxidase [Streptomyces sp. AA4] gi|302434192|gb|EFL06008.1| L-lactate oxidase [Streptomyces sp. AA4] Length = 411 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 244 PTPLSLEMAR--PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 PTP+ L A EA+ G+ +G DI+ ++ GA+ + FL M + Sbjct: 317 PTPIELLPAALDAVEGEAEVWVDTGILSGGDIVAALARGANAVLIGRAFLYGLMAGGERG 376 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V ++ LR E + +M LLG +RV +L A +R Sbjct: 377 VQRCVDILRTEMVRTMQLLGVRRVDDLRPTHATLR 411 >gi|302896220|ref|XP_003046990.1| hypothetical protein NECHADRAFT_45968 [Nectria haematococca mpVI 77-13-4] gi|256727918|gb|EEU41277.1| hypothetical protein NECHADRAFT_45968 [Nectria haematococca mpVI 77-13-4] Length = 408 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG G DILK+I LGA+ G+A PFL + V + L+ E S+ L G Sbjct: 315 GGFERGSDILKAIALGATAVGIARPFLYSLVYGQKGVEHLSQILKDELETSLRLAG 370 >gi|83944054|ref|ZP_00956511.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. EE-36] gi|83845301|gb|EAP83181.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. EE-36] Length = 375 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 21/166 (12%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 +G FA + + L + VP+++K GC L + D + +G+ ++ GG Sbjct: 212 DGMMVFAPTWADLTRLIADSPVPVIIK--GC-LRATDARRFVDAGVAGIIVSNHGGRVLD 268 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + + + V Q G P+ L+ GG+R G D+ K++ LGA Sbjct: 269 TVPAP---VTQLAAVVQAVGQDVPVYLD--------------GGIRRGSDVFKALALGAE 311 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P + +D + + LR E V+M L G V+++ Sbjct: 312 AVLVGRPVMHGLIVDGARGASQVLRRLRDELEVTMALCGCATVEDI 357 >gi|317038795|ref|XP_001402214.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 494 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 N + G+R G DILK++ LGA+ G+ L + V I+ +R E +M Sbjct: 387 NRMEVYVDSGIRRGTDILKAVCLGATAVGMGRSMLFATNYGQEGVEHLIDIMRDELETAM 446 Query: 317 FLLGTKRVQEL---YLNTALIRH 336 +G + E +NT I H Sbjct: 447 RNVGITSLDEAGPHLVNTGDIDH 469 >gi|313500645|gb|ADR62011.1| LldD [Pseudomonas putida BIRD-1] Length = 381 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M L Sbjct: 302 KILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVL 361 Query: 319 LGTKRVQELYLNTALIRH 336 G K + E+ ++ L+R Sbjct: 362 TGAKSISEITRDS-LVRE 378 >gi|84489476|ref|YP_447708.1| glutamate synthase subunit 2 [Methanosphaera stadtmanae DSM 3091] gi|84372795|gb|ABC57065.1| putative glutamate synthase, subunit 2 with ferredoxin domain [Methanosphaera stadtmanae DSM 3091] Length = 492 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 DL KI L D VP+++K G D+++ K+G I G G + + E Sbjct: 286 DLGMKIDQLRDITDWKVPIIVKFTA-GRVEQDVKIAAKAGADIIVIDGMQGGTGAGPE-- 342 Query: 228 RDLESDIGIVFQDWGIPTPLSL---EMARPYCN---EAQFIASGGLRNGVDILKSIILGA 281 ++ + GIPT ++ + A N E +A+GG+R+G D+ K+I LGA Sbjct: 343 --------VITEHSGIPTIQAIMEADTALKEVNLRTEVSLVAAGGIRSGADVAKAIALGA 394 >gi|121603929|ref|YP_981258.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] gi|120592898|gb|ABM36337.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 372 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G DI K+I LGA L P L A + + A ++ E + +M LLG R+ Sbjct: 307 GVRRGSDIAKAIALGAKAVFLGRPLLYGLAAQGAAGIDAVMKQFSDELVRTMILLGASRI 366 Query: 325 QEL 327 +L Sbjct: 367 ADL 369 >gi|301629625|ref|XP_002943938.1| PREDICTED: l-lactate dehydrogenase [cytochrome]-like [Xenopus (Silurana) tropicalis] Length = 379 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 + + +A G+RNG+D++++I LGA + ++ + +A V +E L KE V+ Sbjct: 299 GQIKILADSGIRNGLDVVRAIALGADCAMIGRAYIYALATAGEAGVKHLLELLEKEMRVA 358 Query: 316 MFLLGTKRVQEL 327 M L +V ++ Sbjct: 359 MTLTSVAKVADI 370 >gi|226943364|ref|YP_002798437.1| L-lactate dehydrogenase/FMN-dependent alpha-hydroxy acid dehydrogenase [Azotobacter vinelandii DJ] gi|226718291|gb|ACO77462.1| L-lactate dehydrogenase/FMN-dependent alpha-hydroxy acid dehydrogenase [Azotobacter vinelandii DJ] Length = 371 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 23/156 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 ++A L S +PLL+K V + D L GI ++ GG + + ++ + Sbjct: 227 ELAWLRSLTRLPLLVKGV---MHPEDARRALAEGIDGIIVSNHGGRTLDTQPATIEVLEE 283 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--LGGLASPFL 291 I V + PL L+ GG+R G D+LK++ LGAS L G + F Sbjct: 284 IAGVVEGR---LPLLLD--------------GGIRRGTDVLKALALGASAVLVGRSYVFA 326 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V A++ LR E V+M L G + + ++ Sbjct: 327 L-AAAGAPGVCHALQLLRAELEVAMALTGCRTLADI 361 >gi|121605455|ref|YP_982784.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] gi|120594424|gb|ABM37863.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 396 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIV 314 E + GG+R G DILK++ LGAS + P++ ++ VA + LR E + Sbjct: 315 AGELPVLVDGGIRRGTDILKAMALGASAVLVGRPYIHGLANAGALGVAHVLRLLRDELEI 374 Query: 315 SMFLLGTKRVQE 326 +M L G + + + Sbjct: 375 AMALCGCRTLAQ 386 >gi|325276133|ref|ZP_08141942.1| L-lactate dehydrogenase [Pseudomonas sp. TJI-51] gi|324098732|gb|EGB96769.1| L-lactate dehydrogenase [Pseudomonas sp. TJI-51] Length = 381 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M L Sbjct: 302 KILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVL 361 Query: 319 LGTKRVQELYLNTALIR 335 G K + E+ ++ L+R Sbjct: 362 TGAKTISEITRDS-LVR 377 >gi|167035728|ref|YP_001670959.1| L-lactate dehydrogenase [Pseudomonas putida GB-1] gi|259494489|sp|B0KIT4|LLDD_PSEPG RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166862216|gb|ABZ00624.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas putida GB-1] Length = 381 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M L Sbjct: 302 KILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVL 361 Query: 319 LGTKRVQELYLNTALIRH 336 G K + E+ ++ L+R Sbjct: 362 TGAKSISEITRDS-LVRE 378 >gi|237784650|ref|YP_002905355.1| L-lactate dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] gi|237757562|gb|ACR16812.1| L-lactate dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] Length = 418 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L E+AR + + + G+ NG DI+ ++ LGA + +L M A Sbjct: 309 PVPFLLLPEVAREVGKDVEIMVDTGIMNGADIVAALALGADFTLIGRAYLYGLMAGGRAG 368 Query: 302 V-AAIESLRKEFIVSMFLLGTKRVQEL 327 V IE LR + +M LL ++EL Sbjct: 369 VDRTIEILRSQIERTMKLLQVTSIEEL 395 >gi|26991419|ref|NP_746844.1| L-lactate dehydrogenase [Pseudomonas putida KT2440] gi|148549804|ref|YP_001269906.1| L-lactate dehydrogenase [Pseudomonas putida F1] gi|81840443|sp|Q88DT3|LLDD_PSEPK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990710|sp|A5W9B2|LLDD_PSEP1 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|24986490|gb|AAN70308.1|AE016671_9 L-lactate dehydrogenase [Pseudomonas putida KT2440] gi|148513862|gb|ABQ80722.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas putida F1] Length = 381 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M L Sbjct: 302 KILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVL 361 Query: 319 LGTKRVQELYLNTALIRH 336 G K + E+ ++ L+R Sbjct: 362 TGAKSISEITRDS-LVRE 378 >gi|195172732|ref|XP_002027150.1| GL20092 [Drosophila persimilis] gi|194112963|gb|EDW35006.1| GL20092 [Drosophila persimilis] Length = 366 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A+ N+ + GG+ G DI K++ LGA + P + A + V + L Sbjct: 274 EVAKAVGNDLLVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEEMLGVL 333 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 RK+F ++M L+G + +++ + ++++ H+ Sbjct: 334 RKDFEITMALIGCQTLKD--IQSSMVVHE 360 >gi|171684671|ref|XP_001907277.1| hypothetical protein [Podospora anserina S mat+] gi|170942296|emb|CAP67948.1| unnamed protein product [Podospora anserina S mat+] Length = 524 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 240 DWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 D P +L + YC E + GG+R G D++K++ LGA G+ L Sbjct: 398 DTAPPAVHTLLECKKYCPEVFDIIEIWVDGGIRRGTDVVKALCLGAKAVGVGRAALYGLG 457 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALI 334 V E L+ E M ++G K + EL ++N+ ++ Sbjct: 458 AGGWKGVERTFEILQGEIQTCMKMMGAKDISELGPRFINSRMV 500 >gi|46581188|ref|YP_011996.1| FMN-dependent family dehydrogenase [Desulfovibrio vulgaris str. Hildenborough] gi|120601578|ref|YP_965978.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris DP4] gi|46450609|gb|AAS97256.1| dehydrogenase, FMN-dependent family [Desulfovibrio vulgaris str. Hildenborough] gi|120561807|gb|ABM27551.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris DP4] gi|311234859|gb|ADP87713.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris RCH1] Length = 341 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLG 320 + GG+R+GVD+ K + LGA + PF A+ ++ V + +++L+ + + +M L G Sbjct: 266 LVDGGVRDGVDVFKMLALGADAVMIGRPFSIAAVGGLAEGVASYVDTLKAQLVQAMILTG 325 Query: 321 TKRV 324 + V Sbjct: 326 SADV 329 >gi|332286857|ref|YP_004418768.1| L-lactate cytochrome c reductase [Pusillimonas sp. T7-7] gi|330430810|gb|AEC22144.1| L-lactate cytochrome c reductase [Pusillimonas sp. T7-7] Length = 396 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K++ LGA PF ++ + V AI L+ E +M LLG R+ Sbjct: 319 GVRRGSDVIKALSLGARCVFAGRPFNYASSVAGAAGVDHAIRILQTELHRNMALLGLNRL 378 Query: 325 QELYLNTALIRH 336 +E L+ ++RH Sbjct: 379 EE--LDDTMVRH 388 >gi|288960056|ref|YP_003450396.1| L-lactate dehydrogenase (cytochrome) [Azospirillum sp. B510] gi|288912364|dbj|BAI73852.1| L-lactate dehydrogenase (cytochrome) [Azospirillum sp. B510] Length = 404 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFL 318 + + GG+R+G D++K++ LGA + FL +A V+ +E +RKE V+M + Sbjct: 323 EVLMDGGIRSGQDVVKALALGAKGTFIGRAFLYGLGAGGEAGVSQCLEIIRKEMDVTMAM 382 Query: 319 LGTKRVQELYLN 330 G + ++ + N Sbjct: 383 CGLRDIRTVTAN 394 >gi|240141069|ref|YP_002965549.1| hypothetical protein MexAM1_META1p4643 [Methylobacterium extorquens AM1] gi|240011046|gb|ACS42272.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 329 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 29/63 (46%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L +A V L+E GCG + D+ + + G FD+ G W R +R+L + Sbjct: 77 LDAAAGVVAHLREAGCGFAVGDVRVPIVPGAILFDLLNGGDKGWGRFPPYRELGYAAALA 136 Query: 238 FQD 240 QD Sbjct: 137 AQD 139 >gi|125810146|ref|XP_001361375.1| GA15579 [Drosophila pseudoobscura pseudoobscura] gi|54636550|gb|EAL25953.1| GA15579 [Drosophila pseudoobscura pseudoobscura] Length = 366 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+A+ N+ + GG+ G DI K++ LGA + P + A + V + L Sbjct: 274 EVAKAVGNDLLVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEEMLGVL 333 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 RK+F ++M L+G + +++ + ++++ H+ Sbjct: 334 RKDFEITMALIGCQTLKD--IKSSMVVHE 360 >gi|260595955|ref|YP_003208526.1| L-lactate dehydrogenase [Cronobacter turicensis z3032] gi|260215132|emb|CBA26917.1| L-lactate dehydrogenase [cytochrome] [Cronobacter turicensis z3032] Length = 401 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V + + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGEQGVANLLNLIEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKSIKEI 370 >gi|261289813|ref|XP_002611768.1| hypothetical protein BRAFLDRAFT_236342 [Branchiostoma floridae] gi|229297140|gb|EEN67778.1| hypothetical protein BRAFLDRAFT_236342 [Branchiostoma floridae] Length = 358 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + P + A + D V + LR E ++M L G + Sbjct: 281 GGVRTGTDVLKALALGARAVFVGRPAIWGLAYNGEDGVAEVMTILRSELDLAMALSGCRS 340 Query: 324 VQEL 327 + E+ Sbjct: 341 LAEI 344 >gi|115443412|ref|XP_001218513.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188382|gb|EAU30082.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 460 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%) Query: 244 PTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 P + LE+ + +C N+ + G++ G D++K++ +GA GL L A+ Sbjct: 341 PMQVLLEIQK-FCPQVLNQLEVFIDDGIKRGTDVVKALAMGAKAVGLGRAALYGLAVGGE 399 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALI 334 + V A++ L E +M LLG V +L ++NTA + Sbjct: 400 EGVHKALQILADETTTAMRLLGVSNVSDLGPHHVNTAAL 438 >gi|326329356|ref|ZP_08195681.1| lactate 2-monooxygenase (Lactate oxidase) [Nocardioidaceae bacterium Broad-1] gi|325952931|gb|EGD44946.1| lactate 2-monooxygenase (Lactate oxidase) [Nocardioidaceae bacterium Broad-1] Length = 422 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ LGA L P++ A+ + V A +E + E +S+ L+G + V Sbjct: 354 GIRSGADVLKALALGADAVLLGRPYVYGLALAGAAGVQAVVEHMIAELDLSLGLVGCRSV 413 Query: 325 QEL 327 E+ Sbjct: 414 DEV 416 >gi|116620760|ref|YP_822916.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116223922|gb|ABJ82631.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 392 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ + GG R G D+LK++ LGA G+ P++ A + V +E L Sbjct: 305 EVVEATAGQTPVFVDGGFRRGTDVLKALALGARAVGIGRPYIWGLAAFGQEGVERVLEIL 364 Query: 309 RKEFIVSMFLLG 320 R E ++M G Sbjct: 365 RAELALTMRQCG 376 >gi|227498598|ref|ZP_03928742.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904054|gb|EEH89972.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 337 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 E+A + + GG+R GVD+ K++ LGA +A PF+ + V ++ L Sbjct: 252 EIAAAVGGKVKIFVDGGIRTGVDVFKALALGADAVLIARPFVNAVYGGGKEGVRCLVDKL 311 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M + G ++E+ Sbjct: 312 GAELKDTMEMCGAATLREI 330 >gi|149184828|ref|ZP_01863146.1| hypothetical protein ED21_28958 [Erythrobacter sp. SD-21] gi|148832148|gb|EDL50581.1| hypothetical protein ED21_28958 [Erythrobacter sp. SD-21] Length = 382 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 E + I GG+R G ++KS+ +GA+ +L A + V A+ L++E + Sbjct: 303 GEIEIILDGGVRRGTHVMKSLAMGATAASGGRLYLYALAAAGQEGVERALTILKEEIERA 362 Query: 316 MFLLGTKRVQEL 327 M L+G VQ+L Sbjct: 363 MRLMGVASVQQL 374 >gi|119387399|ref|YP_918433.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Paracoccus denitrificans PD1222] gi|119377974|gb|ABL72737.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Paracoccus denitrificans PD1222] Length = 363 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 21/149 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L S +P+LLK + +S+ D E + G ++ GG R L+ Sbjct: 222 IGWLKSQTRLPVLLKGI---MSAHDAERAVAVGADGVIVSNHGG---------RALD--- 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 G+ +P +AR + GG+R G D LK++ LGAS + P + Sbjct: 267 GLPATAEALPV-----VARAIAGRVPVLCDGGIRRGTDALKALALGASAVLIGRPQIHAL 321 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 A+ + V + LR E V+M L G + Sbjct: 322 AVGGAAGVAHMLTILRAELEVAMALTGRR 350 >gi|99080060|ref|YP_612214.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] gi|99036340|gb|ABF62952.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] Length = 387 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA+ + F+ AM V A+E + KE SM L G K Sbjct: 309 GIRSGQDVLKALALGATGTMIGRAFVYGLGAM-GQKGVTRALEVIHKELDTSMALCGEKH 367 Query: 324 VQELYLNTALI 334 V +L + L+ Sbjct: 368 VTDLGRHNLLV 378 >gi|145611506|ref|XP_368909.2| hypothetical protein MGG_00335 [Magnaporthe oryzae 70-15] gi|145018780|gb|EDK03059.1| hypothetical protein MGG_00335 [Magnaporthe oryzae 70-15] Length = 531 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Query: 253 RPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 R YC E + GG++ G D++K++ LGA G+ L V E Sbjct: 421 RKYCPEVFDQIEVWVDGGIKRGTDVIKALCLGAKAVGVGRAALYGLGAGGWKGVERTFEI 480 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L E M LLG K V +L Sbjct: 481 LNGEMATCMKLLGAKTVADL 500 >gi|163797216|ref|ZP_02191170.1| L-lactate dehydrogenase [alpha proteobacterium BAL199] gi|159177511|gb|EDP62065.1| L-lactate dehydrogenase [alpha proteobacterium BAL199] Length = 372 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 40/325 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN+ FD R L ++ EVD FLG KL P+L+ + G R Sbjct: 54 RNRLAFDRLAFRPRVLRDMR--EVDTGGAFLGHKLRLPVLLCPI-GSLESFHPNGPRAAM 110 Query: 81 IAAEKTKVAM---AVGSQRV--MFSDHNAIKSFELRQYAPHTVLISNLG-AVQLNYD-FG 133 AA V++ +VG+ + + + +K F L + L +G A+ YD F Sbjct: 111 QAAADFGVSLFLSSVGTVPLEEVATVQGGMKVFCLYKRGDDDWLDGVVGRAIDHGYDAFA 170 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEI--IQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + D + P +++ ++ N+AD IA D+PL+LK + Sbjct: 171 ITVDSAWYSRRERDLANRFVKPWRQVPGMEFQKALNWAD----IARFKKTYDIPLILKGI 226 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++ G ++ GG R L+ G + + E+ Sbjct: 227 A---TAEDARMAIEHGADAVFVSNHGG---------RQLDHGAGAL--------DVLPEV 266 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 A GG+ G DI K+ LGA + G+ A + VV +E L + Sbjct: 267 VDAVRGRASVAVDGGVVRGTDIAKARALGADVVGIGRLLCCGLAAGGTAGVVRVLELLEE 326 Query: 311 EFIVSMFLLGTKRVQEL---YLNTA 332 E + + LLG + EL YL A Sbjct: 327 EARIDLGLLGVQNFSELDGRYLRLA 351 >gi|332705019|ref|ZP_08425104.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] gi|332356196|gb|EGJ35651.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] Length = 353 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ N + GG+R G D+LK++ LGAS + P L A+ V ++ L Sbjct: 266 EVVAAVGNHLPVLIDGGIRRGTDVLKALALGASAVLVGRPVLWGLAVAGVAGVRHVLQLL 325 Query: 309 RKEFIVSMFLLGTKRVQEL 327 R E ++M L G +V+++ Sbjct: 326 RDELDIAMALSGCTKVKDI 344 >gi|260803159|ref|XP_002596458.1| hypothetical protein BRAFLDRAFT_243691 [Branchiostoma floridae] gi|229281715|gb|EEN52470.1| hypothetical protein BRAFLDRAFT_243691 [Branchiostoma floridae] Length = 287 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 25/138 (18%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LK + LS+ D E ++ G+ ++ GG ++ D+ +G Sbjct: 174 LPVVLKGI---LSAEDAEEAVRRGVDAICVSNHGGRQLDGLDVLPDVVRVVG-------- 222 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 + GG+R G DILK++ LGA + P L A D V Sbjct: 223 -------------GRLEVYMDGGVRTGADILKALALGAKCVFVGRPVLWALAYQGEDGVR 269 Query: 303 AAIESLRKEFIVSMFLLG 320 A++ L E V+M G Sbjct: 270 QALQVLNDELRVAMAHTG 287 >gi|156935947|ref|YP_001439863.1| L-lactate dehydrogenase [Cronobacter sakazakii ATCC BAA-894] gi|259494983|sp|A7MNF6|LLDD_ENTS8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|156534201|gb|ABU79027.1| hypothetical protein ESA_03841 [Cronobacter sakazakii ATCC BAA-894] Length = 401 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L + VA + +L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGEKGVANLLNLIEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 363 GAKSIKEI 370 >gi|126650970|ref|ZP_01723181.1| lactate 2-monooxygenase [Bacillus sp. B14905] gi|126592171|gb|EAZ86220.1| lactate 2-monooxygenase [Bacillus sp. B14905] Length = 387 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L ++P+LLK + L D +L L++GI ++ GG R L+ IG Sbjct: 243 LKRRTNLPILLKGI---LHPEDAKLALENGIDGIIVSNHGG---------RQLDGVIG-- 288 Query: 238 FQDWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 SL+ P + + I G+ G+D LK++ LGA + PF+ Sbjct: 289 ----------SLDALPPIVSAVNGQIPIILDSGVYRGMDALKALALGADAVAIGRPFVYG 338 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++ + ++ E VS+ L GT V+ L Sbjct: 339 LALEGQQGAEKVMTNIYDELKVSIALAGTTSVEGL 373 >gi|195427008|ref|XP_002061571.1| GK20637 [Drosophila willistoni] gi|194157656|gb|EDW72557.1| GK20637 [Drosophila willistoni] Length = 365 Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+ R N+ + GG+ G DI K++ LGA + P + A + V + L Sbjct: 273 EVVRAVGNDLLVMMDGGVLQGNDIFKALALGAKTVFIGRPAVWALAYNGQKGVEEMLSVL 332 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 RK+F ++M L+G + ++ + ++++ H+ Sbjct: 333 RKDFEITMALIGCQSFKD--IQSSMVIHE 359 >gi|297159022|gb|ADI08734.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 386 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K++ LGA+ G+ P+L A+ +D VV + SL E + M + G + Sbjct: 315 GVRTGADVIKALALGATAVGIGRPYLYGLALAGADGVVHVLRSLLAEADLLMAVDGYPTL 374 Query: 325 QEL 327 +L Sbjct: 375 ADL 377 >gi|255019401|ref|ZP_05291509.1| Glutamate synthase [NADPH] large chain [Acidithiobacillus caldus ATCC 51756] gi|254971139|gb|EET28593.1| Glutamate synthase [NADPH] large chain [Acidithiobacillus caldus ATCC 51756] Length = 452 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 21/121 (17%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIES 226 DL+ KI L D P+ +K +G + D++L + +G + G +GGT+ ++ Sbjct: 211 DLTIKIQELREITDWEKPIYVK-IGASRTYHDVKLAVHAGADVIVLDGMQGGTAATQ--- 266 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLRNGVDILKSIILG 280 + + GIPT +L A N Q + SGG+R G D+ K++ +G Sbjct: 267 --------QVFIEHVGIPTLAALRQAVQALEDLGMKNTVQLVISGGIRTGADVAKALAMG 318 Query: 281 A 281 A Sbjct: 319 A 319 >gi|326493606|dbj|BAJ85264.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 172 Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESL 308 E+ + + GG+R G D+LK++ LGA + P L +A IE L Sbjct: 78 EVVKAVGGAVPVLVDGGVRRGTDVLKALALGARAVMVGRPVLYGLAARGEAGAKHVIEML 137 Query: 309 RKEFIVSMFLLGTKRVQEL 327 +E ++M L G + V E+ Sbjct: 138 NRELELAMALCGCRSVAEI 156 >gi|255557255|ref|XP_002519658.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223541075|gb|EEF42631.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 369 Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ K++ LGAS + P + A + + ++ LR EF ++M L G + Sbjct: 286 GGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGIRKVLQMLRDEFELTMALSGCRS 345 Query: 324 VQEL 327 ++E+ Sbjct: 346 LREI 349 >gi|253690492|ref|YP_003019682.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757070|gb|ACT15146.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 386 Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R G+D+++ I LGA L F+ + +A VV + + KE V+M L Sbjct: 303 ILADSGIRTGLDVVRMIALGADSVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNT 331 GTK + ++ ++ Sbjct: 363 GTKSIADITTDS 374 >gi|326493534|dbj|BAJ85228.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 192 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESL 308 E+ + + GG+R G D+LK++ LGA + P L +A IE L Sbjct: 98 EVVKAVGGAVPVLVDGGVRRGTDVLKALALGARAVMVGRPVLYGLAARGEAGAKHVIEML 157 Query: 309 RKEFIVSMFLLGTKRVQEL 327 +E ++M L G + V E+ Sbjct: 158 NRELELAMALCGCRSVAEI 176 >gi|227534405|ref|ZP_03964454.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187959|gb|EEI68026.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 228 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 I GG++ G +LK++ LGA L G+ PF A+ + V A + ++ E ++M L Sbjct: 151 IIFDGGVQRGTHVLKALALGADLVGIGRPFSYGLALGGWEGVKAVADHMKMEINIAMQLT 210 Query: 320 GTKRVQEL 327 G + + ++ Sbjct: 211 GCQTMADV 218 >gi|222111980|ref|YP_002554244.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Acidovorax ebreus TPSY] gi|221731424|gb|ACM34244.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax ebreus TPSY] Length = 382 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV-AAIESLR 309 +A+ + + + GG+R+GVD+ K++ LGA + P++ +A V + + Sbjct: 297 IAQAVGAQTEVLVDGGVRSGVDVFKALALGARGVLIGRPWVWALAAQGEAGVHTLLAQWQ 356 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E +++M L G RV ++ Sbjct: 357 RELLLAMTLAGVTRVADI 374 >gi|114570667|ref|YP_757347.1| (S)-2-hydroxy-acid oxidase [Maricaulis maris MCS10] gi|114341129|gb|ABI66409.1| (S)-2-hydroxy-acid oxidase [Maricaulis maris MCS10] Length = 381 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSM 316 +A+ I GG+R G DI+K++ LGA+ + P+L A V A++ L M Sbjct: 302 QAEVILDGGIRRGTDIIKALALGATAVAVGRPYLFGLGAGGQAGVERALDILVSALERDM 361 Query: 317 FLLGTKRVQEL 327 L+G R+ +L Sbjct: 362 ALVGATRLSDL 372 >gi|150398700|ref|YP_001329167.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium medicae WSM419] gi|150030215|gb|ABR62332.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium medicae WSM419] Length = 381 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG++ G ++K++ LGA GL +L P + A V A++ +R E SM L+G K Sbjct: 310 GGVQRGTHVIKALSLGAKAVGLGRYYLFPLAAAGQAGVERALDLMRLEIERSMKLMGCKC 369 Query: 324 VQEL 327 V +L Sbjct: 370 VDDL 373 >gi|238755700|ref|ZP_04617034.1| L-lactate dehydrogenase [cytochrome] [Yersinia ruckeri ATCC 29473] gi|238706067|gb|EEP98450.1| L-lactate dehydrogenase [cytochrome] [Yersinia ruckeri ATCC 29473] Length = 381 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFL 318 + A G+R+G+D+++ I LGA L F+ + +A VA +E KE V+M L Sbjct: 302 KIFADSGIRSGLDVVRMIALGADSVLLGRAFIYALATAGEAGVANLLELFDKEMRVAMTL 361 Query: 319 LGTKRVQEL 327 G K + E+ Sbjct: 362 TGAKSISEI 370 >gi|213405165|ref|XP_002173354.1| lactate 2-monooxygenase [Schizosaccharomyces japonicus yFS275] gi|212001401|gb|EEB07061.1| lactate 2-monooxygenase [Schizosaccharomyces japonicus yFS275] Length = 405 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+GVD+++++ LGA + PFL ++ +D VV + + + ++M L G + Sbjct: 334 GVRSGVDVMRALALGAKAVLIGRPFLWGLSLAGTDGVVHVLRCIMADLDLNMGLAGYHSI 393 Query: 325 QEL 327 +EL Sbjct: 394 KEL 396 >gi|240170510|ref|ZP_04749169.1| putative L-lactate dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 413 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 244 PTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P P L +AR + + G+ +G DI+ +I LGA + +L M +A Sbjct: 310 PVPFHLLPSVARELGKHTEILMDTGIMSGADIVAAIALGARCTLVGRAYLYGLMAGGEAG 369 Query: 302 VA-AIESLRKEFIVSMFLLGTKRVQEL 327 VA AIE L I +M LLG + EL Sbjct: 370 VARAIEILGSGVIRTMRLLGVTSLAEL 396 >gi|311900092|dbj|BAJ32500.1| putative oxidoreductase [Kitasatospora setae KM-6054] Length = 359 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+ ++ LGA L P L A D + V A++ L+ E ++ LLG R Sbjct: 288 GGVRTGTDVALAVALGARAVLLGRPILWALAADGENGVAQALDLLKAELDDTLALLGRPR 347 Query: 324 VQEL 327 + +L Sbjct: 348 LADL 351 >gi|167566550|ref|ZP_02359466.1| FMN-dependent dehydrogenase [Burkholderia oklahomensis EO147] Length = 412 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 244 PTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 P P ++ E+A + + GG+R G D++K++ LGAS + ++ + + Sbjct: 288 PAPSAMDVLPEIADAVGERTEILMDGGVRRGADVIKALALGASAVSIGRAYIYGLGAAGE 347 Query: 300 AVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 VA +E L+ E + ++ ++G + + EL Sbjct: 348 KGVARCLELLKSEMLPALNMMGFESIAEL 376 >gi|254500319|ref|ZP_05112470.1| hypothetical protein SADFL11_355 [Labrenzia alexandrii DFL-11] gi|222436390|gb|EEE43069.1| hypothetical protein SADFL11_355 [Labrenzia alexandrii DFL-11] Length = 538 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 17/89 (19%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMARPYC- 256 DI+ L+ G+ Y + GRGG + + I+F+D +PT +L AR + Sbjct: 361 DIDAALEIGVDYIILDGRGGGTGA-----------APIIFRDNISVPTIPALARARRHLD 409 Query: 257 ----NEAQFIASGGLRNGVDILKSIILGA 281 N+ + +GGLR D +K++ LGA Sbjct: 410 KVGRNDVSLVITGGLRKPADFVKAMALGA 438 >gi|154502810|ref|ZP_02039870.1| hypothetical protein RUMGNA_00624 [Ruminococcus gnavus ATCC 29149] gi|153796693|gb|EDN79113.1| hypothetical protein RUMGNA_00624 [Ruminococcus gnavus ATCC 29149] Length = 337 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 64/315 (20%), Positives = 118/315 (37%), Gaps = 45/315 (14%) Query: 26 FDDWHLIHRALPEISFDE-VDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERINRNL 79 F W I + I + D +V GK+ S+P + G + N L Sbjct: 49 FQKWQEIRINMDTICEKKPADTTVTLFGKEFSYPFFAGPVGAVKLHYGEKYTDQEYNEIL 108 Query: 80 AIAAEKTKVAMAVGS---QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 + +A G RVM A++ +L TV ++ ++ + + Sbjct: 109 LAGCMEGGIAAFTGDGSDARVMQEATAAVQ--KLGGLGIPTVKPWDMDTIRDKMELVKRS 166 Query: 137 AHQAVHV-LGADGL-FLH-LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 AV + + A GL FL LNP P G+ + +L + + ++P +LK + Sbjct: 167 GAFAVAMDIDAAGLPFLQNLNP------PAGSKSVEELKEIVKI----AEIPFILKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ + L++G + ++ GG + S ++ DI + Sbjct: 215 -MTVRGAKKALEAGAQAIVVSNHGGRVLDQCPSTAEVLPDI-----------------VK 256 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + GG+R G D+ K++ +GA +A PF+ A + V A E Sbjct: 257 AVDGRMKIFVDGGIRTGTDVFKALAMGADAALIARPFVTAAYGAGVQGVSAYTAKTGGEL 316 Query: 313 IVSMFLLGTKRVQEL 327 +M + G V+E+ Sbjct: 317 RDTMAMCGAFAVKEI 331 >gi|58262842|ref|XP_568831.1| L-lactate dehydrogenase (cytochrome) [Cryptococcus neoformans var. neoformans JEC21] gi|134108458|ref|XP_777180.1| hypothetical protein CNBB4110 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259865|gb|EAL22533.1| hypothetical protein CNBB4110 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223481|gb|AAW41524.1| L-lactate dehydrogenase (cytochrome), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 592 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVV 302 P P RP+ + GG+ G D +K++ LGA+ G FL A+ V Sbjct: 503 PDPQEKPTDRPF----EIWVDGGIWRGSDAVKALCLGANAVGSGRGFLFANAVGGQKGVE 558 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 A+ E + +M LLG +V +L Sbjct: 559 HAVNIFSAEILTTMRLLGVNKVDQL 583 >gi|307543809|ref|YP_003896288.1| L-lactate dehydrogenase [Halomonas elongata DSM 2581] gi|307215833|emb|CBV41103.1| L-lactate dehydrogenase (cytochrome) [Halomonas elongata DSM 2581] Length = 384 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 ++ +A G+R+G+D+++ I +GA L F+ + +A VA +E KE V+ Sbjct: 299 DDLAILADSGVRSGLDVVRMIAMGADTVLLGRAFVYALATAGEAGVAHLLELFEKEMRVA 358 Query: 316 MFLLGTKRVQELYLNT 331 M L G + + +L +++ Sbjct: 359 MTLTGARSISDLGIDS 374 >gi|239816882|ref|YP_002945792.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Variovorax paradoxus S110] gi|239803459|gb|ACS20526.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Variovorax paradoxus S110] Length = 401 Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 265 GGLRNGVDILKSIILGAS--LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D++K++ LGA L G A P A ++ ++ L +E +M LLG Sbjct: 309 GGIRRGSDVVKALALGARGVLAGRA-PLYGLACGGEQGALSVLQLLAQEIERTMTLLGAT 367 Query: 323 RVQELYLN 330 R EL L Sbjct: 368 RAAELGLR 375 >gi|213052717|ref|ZP_03345595.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 187 Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ I LGA L +L A V ++ + KE V+M L Sbjct: 94 ILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLT 153 Query: 320 GTKRVQEL 327 G K + E+ Sbjct: 154 GAKSISEI 161 >gi|146276402|ref|YP_001166561.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17025] gi|145554643|gb|ABP69256.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17025] Length = 387 Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLR 309 + R ++ + GG+R+G D+LK++ +GA + ++ +A V A+E + Sbjct: 294 IVRAVGDQVEIHMDGGIRSGQDVLKALAMGAKGTYIGRSYIYGLGAMGEAGVRRALEVIW 353 Query: 310 KEFIVSMFLLGTKRVQEL 327 KE VSM L G K V+ L Sbjct: 354 KELDVSMALCGEKDVKAL 371 >gi|307186145|gb|EFN71870.1| Hydroxyacid oxidase 1 [Camponotus floridanus] Length = 243 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 E+++ N+ + GG+ G+D+LK++ LGA + P L D +E + Sbjct: 166 EISKAVGNQVEIYMDGGVTEGIDVLKALALGAKMVFFGRPMLWGLTYDGEKGAYQILELM 225 Query: 309 RKEFIVSMFLLGTKR 323 R+E ++ L G + Sbjct: 226 RREIDLAFALTGKSK 240 >gi|307329288|ref|ZP_07608452.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] gi|306885077|gb|EFN16099.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] Length = 397 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 21/151 (13%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L A D+P+L+K V L D E + G+ ++ GG R ++ D Sbjct: 253 LREATDLPVLIKGV---LHPDDAEQAIAHGVSGVVVSNHGGRQLDRSKAALD-------- 301 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 +P +AR + G R+G D+ ++ LGA L P+L A+D Sbjct: 302 ----ALPA-----VARQVAGRVPVLFDSGTRSGADVAIALGLGADAVLLGRPWLYGLAID 352 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +D V + + E ++M + G V++L Sbjct: 353 GADGVRHVLRCVLAELELTMLMSGAATVEDL 383 >gi|88854634|ref|ZP_01129301.1| putative l-lactate dehydrogenase [marine actinobacterium PHSC20C1] gi|88816442|gb|EAR26297.1| putative l-lactate dehydrogenase [marine actinobacterium PHSC20C1] Length = 410 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 IP L + R N+ + + G+ NG DI+ S+ LGA + +L M + V Sbjct: 310 IPFHLLPNVVREVGNDVEVMVDTGIMNGADIVASMALGAKFTLIGRAYLYGLMAGGREGV 369 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 IE L ++ I +M LL ++EL Sbjct: 370 DRTIEILSEQVIRTMKLLEVTSIEEL 395 >gi|332286899|ref|YP_004418810.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pusillimonas sp. T7-7] gi|330430852|gb|AEC22186.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pusillimonas sp. T7-7] Length = 361 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA L P + A++ V + +R EF ++M G + Sbjct: 290 GGIRRGTDVLKALALGAKAVMLGRPIIHGLAVNGPSGVAHVLHIIRTEFEMAMVQCGCRT 349 Query: 324 VQEL 327 + ++ Sbjct: 350 LADI 353 >gi|307725578|ref|YP_003908791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] gi|307586103|gb|ADN59500.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] Length = 410 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + PF A + A VA AI L E ++ LLG Sbjct: 327 GGIRRGTDVLKALALGADFVFVGRPFNYAASVAGKAGVAHAIGILHAEVQRNLGLLGLNS 386 Query: 324 VQEL 327 + EL Sbjct: 387 IDEL 390 >gi|258655396|ref|YP_003204552.1| L-lactate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258558621|gb|ACV81563.1| L-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] Length = 422 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 IP L ++ R +A + G+ NG DI+ SI LGA + +L M + V Sbjct: 310 IPFHLLPQVVREVGRDATVMVDTGIMNGADIVASIALGAKFTLVGRAYLYGLMAGGREGV 369 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 I LR E +M LLG + EL Sbjct: 370 DKTIAILRSEIERTMALLGVSTLDEL 395 >gi|299535032|ref|ZP_07048358.1| hydroxyacid oxidase 1 [Lysinibacillus fusiformis ZC1] gi|298729528|gb|EFI70077.1| hydroxyacid oxidase 1 [Lysinibacillus fusiformis ZC1] Length = 386 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 22/160 (13%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L ++P+LLK + L D +L + +GI ++ GG R L+ IG + Sbjct: 242 LKKRTNLPILLKGI---LHPEDAKLAIDNGINGIIVSNHGG---------RQLDGVIGSL 289 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 +P +A+ + I G+ G+D LK++ LGA + PF+ A++ Sbjct: 290 D---ALPA-----IAKVVNRQIPIILDSGVYRGMDALKALSLGADAVAIGRPFVYGLALE 341 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V + +L E VS+ L G V+ L N L++ Sbjct: 342 GQQGVEKVMTNLYDELKVSIALAGATSVKGLR-NITLVKQ 380 >gi|317486882|ref|ZP_07945693.1| FMN-dependent dehydrogenase [Bilophila wadsworthia 3_1_6] gi|316921872|gb|EFV43147.1| FMN-dependent dehydrogenase [Bilophila wadsworthia 3_1_6] Length = 345 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G+D+LK++ GA + PF A+ S+ V + L + + SM L G Sbjct: 271 GGIRDGLDVLKALAFGADAVLIGRPFCLAAVGGGSEGVKLTADHLYNQLVRSMVLTGCPS 330 Query: 324 VQE 326 V+E Sbjct: 331 VRE 333 >gi|291228835|ref|XP_002734383.1| PREDICTED: hydroxyacid oxidase 2-like [Saccoglossus kowalevskii] Length = 301 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 G+P + + E++R ++ + GG+R G D+LK++ LGA + P + A Sbjct: 219 GVPATIDVLAEISRAVGDKIEVYMDGGVRTGTDVLKALALGARAVFIGRPVIYGLAYKGE 278 Query: 299 DAVVAAIESLRKEFIVSMFLLG 320 + V ++ L+ E ++M L G Sbjct: 279 EGVKNVLQILKDELSLAMALSG 300 >gi|227886637|ref|ZP_04004442.1| possible (S)-2-hydroxy-acid oxidase [Escherichia coli 83972] gi|300977776|ref|ZP_07174044.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1] gi|301049191|ref|ZP_07196167.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1] gi|227836382|gb|EEJ46848.1| possible (S)-2-hydroxy-acid oxidase [Escherichia coli 83972] gi|300299010|gb|EFJ55395.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1] gi|300409802|gb|EFJ93340.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1] Length = 409 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSS 298 G+P+ +S E+A ++ I G+R G+D++++I LGA+ + P L A+ Sbjct: 309 GVPSAISQLQEVAARVGHKVPVIFDSGIRRGIDVVRAISLGATAVAVGRPVLYGIAVGGV 368 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L+ E +M L G + +++L Sbjct: 369 GGVAGVIEHLKTELRTAMLLSGARTLKDL 397 >gi|330794910|ref|XP_003285519.1| hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum] gi|325084522|gb|EGC37948.1| hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum] Length = 387 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 21/154 (13%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P+L+K V C D LK G ++ GG S ++ I V Sbjct: 243 LRSITTLPVLVKGVMC---PQDAAEALKHGADGIIVSNHGGRQLDTSPSTIEVLPAISKV 299 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 Q IP I GG+R G DILK++ GA+ + P + + Sbjct: 300 VQG-KIP----------------LILDGGIRRGTDILKALAFGANAVLIGRPVIWGLSCG 342 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D V+ + L E +SM G + E+ N Sbjct: 343 GKDGVLRVLNLLNSELQLSMAFTGMNSIHEITEN 376 >gi|167573629|ref|ZP_02366503.1| FMN-dependent dehydrogenase [Burkholderia oklahomensis C6786] Length = 412 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 244 PTPLSL----EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 P P ++ E+A + + GG+R G D++K++ LGAS + ++ + + Sbjct: 288 PAPSAMDVLPEIADAVGERTEILMDGGVRRGADVIKALALGASAVSIGRAYIYGLGAAGE 347 Query: 300 AVVA-AIESLRKEFIVSMFLLGTKRVQEL 327 VA +E L+ E + ++ ++G + + EL Sbjct: 348 KGVARCLELLKSEMLPALNMMGFESIAEL 376 >gi|327284175|ref|XP_003226814.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like [Anolis carolinensis] Length = 901 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 H N IIQ G+ FA+LSSK D L++ + + + D+ L + +F Sbjct: 695 HFNHAVMIIQSEGHNIFANLSSK--------DYSDLMQLLKKSILATDLTLYFEKRAEFF 746 Query: 212 DIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGI 243 ++ +G +W+ I+S R++ D+G + W I Sbjct: 747 ELVNKGDYNWN-IKSQREIFRSMLMTACDLGAATKPWEI 784 >gi|167045730|gb|ABZ10377.1| putative FMN-dependent dehydrogenase [uncultured marine bacterium HF4000_APKG2098] Length = 384 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + I GG+R G +LK++ LGA +L + A ++ ++ E Sbjct: 303 DKIEVILDGGVRRGTHVLKALALGAKACSFGKAYLFALGAAGQQGIEALLQKMKAEINRD 362 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G K V++L + + R Sbjct: 363 MILMGCKSVKDLNRSKVVFR 382 >gi|148642428|ref|YP_001272941.1| glutamate synthase (NADPH), subunit 2 [Methanobrevibacter smithii ATCC 35061] gi|222446074|ref|ZP_03608589.1| hypothetical protein METSMIALI_01723 [Methanobrevibacter smithii DSM 2375] gi|148551445|gb|ABQ86573.1| glutamate synthase (NADPH), subunit 2 [Methanobrevibacter smithii ATCC 35061] gi|222435639|gb|EEE42804.1| hypothetical protein METSMIALI_01723 [Methanobrevibacter smithii DSM 2375] Length = 498 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%) Query: 170 DLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSR--I 224 DLS KI+ L D VP+++K G + D+++ K G + G +GGT I Sbjct: 286 DLSMKISQLREITDWKVPIIVK-FASGKVASDVKIAAKGGADIIVVDGMQGGTGAGPDVI 344 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 H + S IV D + ++L + +A+GG+R+G D+ K++ LGA Sbjct: 345 MEHSGIPSLAAIVEADQAL-KEINLR------EDVSLVAAGGIRSGADLAKALALGA 394 >gi|330914715|ref|XP_003296754.1| hypothetical protein PTT_06934 [Pyrenophora teres f. teres 0-1] gi|311330963|gb|EFQ95149.1| hypothetical protein PTT_06934 [Pyrenophora teres f. teres 0-1] Length = 388 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 38/202 (18%) Query: 144 LGADGLFLHLNPLQEIIQ--------PNGNTNFADLSSKI-ALLSSAMDVPLLLKEVGCG 194 LGA GL L ++ I+ + NT L+ + L + D+PL+ K G Sbjct: 194 LGAKGLVLTVDSAGSAIRHRAARYGVGSANTKLTKLTWDVFHQLQNMTDLPLIPK----G 249 Query: 195 LSSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA- 252 + ++ D + +K+G++ ++ GG R ++ G P+ L + M Sbjct: 250 IQTVEDAQDAVKNGVKAIFLSNHGG---------RQID----------GAPSTLQVAMEI 290 Query: 253 ----RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + + A GG+R G DILK + LG G+ F+ + ++ V A + L Sbjct: 291 HQRDPSLFKKVEIYADGGIRYGTDILKLLALGVRAVGVGRSFMFANIYGAEGVKKAADLL 350 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 + E ++ +G ++ + L+ Sbjct: 351 KNELLMDAANMGVADLKNIPLD 372 >gi|300978232|ref|ZP_07174182.1| Tat pathway signal sequence [Escherichia coli MS 200-1] gi|300308152|gb|EFJ62672.1| Tat pathway signal sequence [Escherichia coli MS 200-1] gi|307629376|gb|ADN73680.1| putative FMN-dependent dehydrogenase [Escherichia coli UM146] gi|315295477|gb|EFU54805.1| Tat pathway signal sequence [Escherichia coli MS 153-1] gi|324014437|gb|EGB83656.1| Tat pathway signal sequence [Escherichia coli MS 60-1] Length = 409 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 242 GIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSS 298 G+P+ +S E+A ++ I G+R G+D++++I LGA+ + P L A Sbjct: 309 GVPSAISQLQEVAARVGHKVPVIFDSGIRRGIDVVRAISLGATAVAVGRPVLYGIAAGGV 368 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE L+ E +M L G + +++L Sbjct: 369 GGVAGVIEHLKTELRTAMLLSGARTLKDL 397 >gi|270264876|ref|ZP_06193140.1| L-lactate dehydrogenase [Serratia odorifera 4Rx13] gi|270041174|gb|EFA14274.1| L-lactate dehydrogenase [Serratia odorifera 4Rx13] Length = 379 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVS 315 E +A G+RNG+D+++ I LGA L F+ + A V+ +E + KE V+ Sbjct: 299 GEITLLADSGIRNGLDVVRMIALGADSVLLGRAFVYALAAAGGAGVSNLLELIDKEMRVA 358 Query: 316 MFLLGTKRVQELYLNTALIRH 336 M L G K + E+ + + H Sbjct: 359 MTLTGAKTIAEIGAGSLVAGH 379 >gi|189501230|ref|YP_001960700.1| ferredoxin-dependent glutamate synthase [Chlorobium phaeobacteroides BS1] gi|189496671|gb|ACE05219.1| ferredoxin-dependent glutamate synthase [Chlorobium phaeobacteroides BS1] Length = 546 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 52/255 (20%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +LS PL +S M+ G + I L+ AE ++ + G + M A S + Sbjct: 212 ELSIPLFVSDMSFG--ALSREIKIALSRGAELSETGICSG-EGGMLEAERAENSRYFYEL 268 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHV-------LGADGLFLHLNPLQEIIQPNG-- 164 AP + +D QA H G G+ +EI G Sbjct: 269 APG----------EFGWDIEQVTRCQAFHFKAGQAAKTGTGGMLPAEKVSEEIATVRGVA 318 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEV---------GCGLSSM----DIELGLKSGIRY 210 NT+ A S+ L + D + +EV GC LS+ DI+ L+ G+ Y Sbjct: 319 PNTS-AVSPSRFRKLVTPEDFQRIAEEVRQATGGIPVGCKLSAQHIERDIDFALEVGVDY 377 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASG 265 + GRGG + + S L+++I +PT +L AR + + I +G Sbjct: 378 IILDGRGGGTGA---SPDLLKNNI-------AVPTIPALARARKHLDTRGAGHVTLIITG 427 Query: 266 GLRNGVDILKSIILG 280 GLR LK++ LG Sbjct: 428 GLRTESHFLKALALG 442 Searching..................................................done Results from round 2 >gi|254781020|ref|YP_003065433.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter asiaticus str. psy62] gi|254040697|gb|ACT57493.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter asiaticus str. psy62] Length = 337 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 337/337 (100%), Positives = 337/337 (100%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL Sbjct: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI Sbjct: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS Sbjct: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD Sbjct: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA Sbjct: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ Sbjct: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 >gi|315122509|ref|YP_004062998.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495911|gb|ADR52510.1| isopentenyl pyrophosphate isomerase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 276/337 (81%), Positives = 319/337 (94%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 MVNDRKIDHINI+CKD IDR K FFDDWHL+HRALPEIS D+VDPSV+FLGKK+SFPLL Sbjct: 1 MVNDRKIDHINIICKDSHIDRKKNFFDDWHLMHRALPEISLDDVDPSVDFLGKKISFPLL 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGGN+K+I+RINRNLAIAAEKTKVAMAVGSQRVMF+D A+KSFELRQYAPHTVLI Sbjct: 61 ISSMTGGNHKLIQRINRNLAIAAEKTKVAMAVGSQRVMFTDPQAVKSFELRQYAPHTVLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGAVQLNY+FG+++A+QAVHVLGADGLFLHLNPLQE+IQ NGNTNFA+LSSKI+LLSS Sbjct: 121 SNLGAVQLNYNFGIKEANQAVHVLGADGLFLHLNPLQEVIQLNGNTNFANLSSKISLLSS 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 MD+P++LKEVGCG+S MDIELGLK+GIRYFD+AGRGGTSWSR+ESHRD+ + GI FQD Sbjct: 181 EMDIPIILKEVGCGMSPMDIELGLKAGIRYFDLAGRGGTSWSRVESHRDITDNAGIFFQD 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPTP +LEMARPYC +A+FI+SGG+RNG+DILKSIILGAS+GGLASPFLKPAMDSS++ Sbjct: 241 WGIPTPYALEMARPYCKKAKFISSGGIRNGMDILKSIILGASIGGLASPFLKPAMDSSES 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V++ IESLRKEF++SMFLLG KRV+ELYLNT+L+RHQ Sbjct: 301 VISVIESLRKEFVISMFLLGIKRVEELYLNTSLVRHQ 337 >gi|119493251|ref|ZP_01624091.1| hypothetical protein L8106_30505 [Lyngbya sp. PCC 8106] gi|119452724|gb|EAW33902.1| hypothetical protein L8106_30505 [Lyngbya sp. PCC 8106] Length = 360 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 144/336 (42%), Positives = 201/336 (59%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DH+ I +D + D + H LPE++ D++D + FLGKKL PLL Sbjct: 21 TQTRKADHLRICLDEDVQFRQQTNGLDRYRFTHCCLPELNRDDIDLTTSFLGKKLQAPLL 80 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN+ LAIAA++ +AM VGSQRV + +F +R AP +L Sbjct: 81 ISSMTGGTAQA-KMINQRLAIAAQQFNIAMGVGSQRVAVENPQVADTFAVRSLAPDILLF 139 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNYD+G+++ + V +L AD L LHLNPLQE IQ G+TNF L KI L + Sbjct: 140 ANLGAVQLNYDYGLEQCQRVVDILEADALILHLNPLQECIQTEGDTNFRGLLDKIKTLCT 199 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + +P++ KEVG G+S+ L++G+ D+AG GGTSW++IE R + +G Sbjct: 200 KLPIPVIAKEVGNGISATMATRLLEAGVTAIDVAGAGGTSWAKIEGERAADPRQRRLGET 259 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLRNG+++ K+I LGA L GLA PFL+ A +S Sbjct: 260 FADWGLPTAECITRIRTINSNLPLIASGGLRNGLEVAKAIALGADLAGLAWPFLQAAAES 319 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV +E L+ E +F G + + EL + L Sbjct: 320 EQAVYRLVEILKAEISTVLFCTGNRTLTELKQSGVL 355 >gi|300864376|ref|ZP_07109248.1| isopentenyl pyrophosphate isomerase [Oscillatoria sp. PCC 6506] gi|300337602|emb|CBN54394.1| isopentenyl pyrophosphate isomerase [Oscillatoria sp. PCC 6506] Length = 349 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 141/336 (41%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +HI I ++ + + + H LPE+S E+D S +FLGKK++ PLL Sbjct: 10 TQTRKAEHIRICLEEDVQFHQTTNGLERYRFAHCCLPELSLSEIDLSTKFLGKKMAAPLL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA A+ K+AM VGSQRV +F +RQ AP +L Sbjct: 70 ISSMTGGTE-LAQTINYRLADVAQHYKIAMGVGSQRVALEKPELADTFTVRQRAPDILLF 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY++G+++ QA+ +L AD L LHLNPLQE IQ G+TNF L KI+ L Sbjct: 129 ANIGAVQLNYNYGLEQCQQAIDILEADALILHLNPLQECIQTEGDTNFKGLLDKISKLCY 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S + L++G+ D+AG GGTSW++IE R + +G Sbjct: 189 KLPVPVIAKEVGNGISGVMAMKLLEAGVSAIDVAGAGGTSWAKIEGERAKNAKQRRLGST 248 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLRNG+D+ K+I LGA + GLA P L+ A +S Sbjct: 249 FADWGVPTAECIVNVRTAAPKVPLIASGGLRNGLDVAKAIALGADIAGLAWPLLQAAAES 308 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV +E L E +F G+ + +L + L Sbjct: 309 EAAVNELVEILIAEIATVLFCTGSSNLHDLKNSGVL 344 >gi|218248744|ref|YP_002374115.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 8801] gi|257061802|ref|YP_003139690.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 8802] gi|218169222|gb|ACK67959.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 8801] gi|256591968|gb|ACV02855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 8802] Length = 341 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 141/333 (42%), Positives = 197/333 (59%), Gaps = 5/333 (1%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DH+ I ++ R + + H LPE+ F+E+D S FLGK L PLLISS Sbjct: 7 RKDDHLRICLEEDVQFRQLSNGLERYRFTHCCLPELDFNEIDLSTTFLGKSLEAPLLISS 66 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+ ++AM VGSQRV +F +R AP+ +L++NL Sbjct: 67 MTGGTPQA-KMINFRLAEVAQTYRLAMGVGSQRVAVEKPEVCDTFTVRSVAPNILLLANL 125 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY +G+++ + V +L AD L LH+NPLQE IQ G+TNF L KI + ++ Sbjct: 126 GAVQLNYTYGIEECLKVVELLQADALILHINPLQECIQTKGDTNFKGLLDKINKVCYSLP 185 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQD 240 VP++ KEVG G+S + +++G+ D+AG GGTSW+++ES R L+ +G F D Sbjct: 186 VPVIAKEVGNGISQPMAQKLIEAGVSAIDVAGAGGTSWAKVESERATNPLKRKLGQTFAD 245 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T L R + E IASGGLRNG+D+ K+I LGA LGGLA PFL+ A +S Sbjct: 246 WGISTADCLTEIRRFHPEIPLIASGGLRNGLDVAKAIALGADLGGLAFPFLQAASESPQT 305 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +E L E +F G + +L + L Sbjct: 306 LEELVELLIAEIKTVLFCTGNANLSDLKITPRL 338 >gi|332708204|ref|ZP_08428194.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lyngbya majuscula 3L] gi|332353030|gb|EGJ32580.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lyngbya majuscula 3L] Length = 342 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 200/336 (59%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I +D N + + H LPE++ E+D S FLGK L PLL Sbjct: 4 TQQRKADHIRICLDEDVQFRANTNGLERYRFTHCCLPELNRSEIDISTTFLGKSLGAPLL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA A+ K+AM VGSQRV +F +R AP +L Sbjct: 64 ISSMTGGTEQA-KTINFRLAEVAQHYKLAMGVGSQRVAVEKPEVGHTFAVRSQAPDIILF 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +G+++ + V +L ADGL LH+NPLQE IQ NG+TNF L KI L S Sbjct: 123 ANIGAVQLNYSYGLEECQKVVDLLTADGLILHINPLQECIQANGDTNFKGLLDKINGLCS 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIV 237 + VP++ KEVG G+S+ + L++G+ D+AG GGTSW+++ES R L + +G Sbjct: 183 KLTVPVIAKEVGNGISAGMAQRLLEAGVTAIDVAGAGGTSWAKVESERGLTAHQRRLGQT 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLRNG+D+ K+I LGA + GLA PFL+ A +S Sbjct: 243 FGDWGLPTAECITSIRAIAPDIPLIASGGLRNGLDVAKAIALGADIAGLALPFLQAAAES 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DAV A ++ L E ++F G + +L + L Sbjct: 303 VDAVDALVQLLMAEITTALFCTGNATLSDLKQSDTL 338 >gi|284050308|ref|ZP_06380518.1| isopentenyl pyrophosphate isomerase [Arthrospira platensis str. Paraca] gi|291569878|dbj|BAI92150.1| isopentenyl pyrophosphate isomerase [Arthrospira platensis NIES-39] Length = 343 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DH+ I + D + FD + H LPEI+ EV+ S EFLGK L+ PLL Sbjct: 5 TESRKADHLRICLESDVQFRQKTNGFDRYRFTHCCLPEINLGEVEVSTEFLGKSLAAPLL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA AA + ++AM VGSQRV +F +R AP VL Sbjct: 65 ISSMTGGTEQA-KLINTRLARAAARHQIAMGVGSQRVAVEKPELAPTFAVRSLAPDIVLF 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+++ + + +L AD L LHLNPLQE IQ G+TNF L KIA L Sbjct: 124 ANLGAVQLNYSYGLEQCQRVIDILEADALILHLNPLQECIQTEGDTNFRGLLDKIADLCY 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP++ KEVG G+S+ + + +G+ D+AG GGTSW+RIE R + +G Sbjct: 184 KLPVPVIAKEVGNGISAAMAKKLIDAGVAAIDVAGAGGTSWARIEGQRATDPRQRRLGET 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLRNG+D+ +I LGA L GLA PFL+ A +S Sbjct: 244 FADWGLPTAECITEVRADSPDIPLIASGGLRNGLDVAYAIALGADLAGLAWPFLQAAAES 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV + +E L E +F G++ +++L L Sbjct: 304 EAAVDSLVEILIAEISTVLFCTGSRTMKDLQRPQVL 339 >gi|209525265|ref|ZP_03273807.1| isopentenyl-diphosphate delta-isomerase, type 2 [Arthrospira maxima CS-328] gi|209494280|gb|EDZ94593.1| isopentenyl-diphosphate delta-isomerase, type 2 [Arthrospira maxima CS-328] Length = 343 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 147/336 (43%), Positives = 197/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DH+ I + D + FD + H LPEI+ EV+ S EFLGK L PLL Sbjct: 5 TESRKADHLRICLESDVQFRQKTNGFDRYRFTHCCLPEINLGEVEVSTEFLGKSLGAPLL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA AA K K+AM VGSQRV +F +R AP +L Sbjct: 65 ISSMTGGTEQA-KLINTRLARAAFKHKIAMGVGSQRVAVEKPELAPTFAVRSLAPDILLF 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G+++ Q + +L AD L LHLNPLQE IQ G+TNF L KIA L Sbjct: 124 ANLGAVQLNYSHGLEQCQQVIDILEADALILHLNPLQECIQTEGDTNFRGLLDKIADLCC 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 ++ VP++ KEVG G+S+ + + +G+ D+AG GGTSW+RIE R + +G Sbjct: 184 SLPVPVIAKEVGNGISATMAKKLIDAGVAAIDVAGAGGTSWARIEGQRATDPRQWRLGET 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLRNG+D+ +I LGA L GLA PFL+ A +S Sbjct: 244 FADWGLPTAECITEVRANSPDIPLIASGGLRNGLDVASAIALGADLAGLAWPFLQAAAES 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV + ++ L E +F G++ +++L L Sbjct: 304 EAAVDSLVDILVAEISTVLFCTGSRTIKDLQRPQVL 339 >gi|254410500|ref|ZP_05024279.1| isopentenyl-diphosphate delta-isomerase, type 2 [Microcoleus chthonoplastes PCC 7420] gi|196182706|gb|EDX77691.1| isopentenyl-diphosphate delta-isomerase, type 2 [Microcoleus chthonoplastes PCC 7420] Length = 342 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 146/338 (43%), Positives = 200/338 (59%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I +D ++ + + H LPEI+ E+D S EFLGK L PLL Sbjct: 4 TQTRKADHIRICLNEDVQFNQITNGLERYRFTHCCLPEINRSEIDISTEFLGKTLGAPLL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA A+ ++AM VGSQRV + +F +R AP +L+ Sbjct: 64 ISSMTGGTQQA-QTINFRLAEVAQTYQLAMGVGSQRVAVENPQVADTFAVRSLAPDILLL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+ + + V +L AD L LHLNPLQE IQ NG+TNF L KI L Sbjct: 123 ANLGAVQLNYSYGLDECLRVVELLAADALILHLNPLQECIQTNGDTNFRGLLDKIHKLCC 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIV 237 + VP++ KEVG G+S+ + L +G+ D+AG GGTSW+++ES R L + +G Sbjct: 183 KLPVPVIAKEVGNGISAAMTQKLLDAGVSAIDVAGAGGTSWAKVESERALNLKQRRLGQT 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R E IASGGLRNG+++ K+I LGA L GLA PFL+ A +S Sbjct: 243 FADWGLPTADCITSIRDIAPEVPLIASGGLRNGLEVAKAIALGADLAGLAFPFLQAASES 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 ++AV +E L E +F G + + + AL + Sbjct: 303 TEAVDELVELLIAEITTVLFCTGNANLSQFKQSDALQK 340 >gi|298492789|ref|YP_003722966.1| isopentenyl-diphosphate delta-isomerase ['Nostoc azollae' 0708] gi|298234707|gb|ADI65843.1| isopentenyl-diphosphate delta-isomerase, type 2 ['Nostoc azollae' 0708] Length = 353 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 145/340 (42%), Positives = 194/340 (57%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK DHI I ++ + + + H LPE ++D S FLGK L+ PLL Sbjct: 15 TQNRKADHIRICLEEDVQCQQVSTGLERYRFTHCCLPECDRKDIDISTNFLGKHLNAPLL 74 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG INR LA ++ K+AM VGSQRV +F +R+YAP +L Sbjct: 75 ISSMTGGTEHA-GIINRRLAEVTQQYKLAMGVGSQRVALEKPQVADTFAIRKYAPDVLLF 133 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY GV + + + +L AD L LH+NPLQE IQP G+TNF L KIA L S Sbjct: 134 ANLGAVQLNYQCGVDECLRIIDILEADALILHINPLQEFIQPRGDTNFWGLFDKIANLCS 193 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP++ KEVG G+S+ + GI+ D+AG GGTSW+ +ES R L+ +G Sbjct: 194 KLPVPVIAKEVGNGISATMAAKLISVGIQAIDVAGAGGTSWALVESERAENPLQRRLGKT 253 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + R +E IASGGLR+G+D+ K I LGA + GLA PFL+ A S Sbjct: 254 FADWGIPTAKCITSIRAQFSEIPLIASGGLRHGLDVAKVIALGADIAGLAIPFLQAADVS 313 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ E L E +F G + + +L + +L Q Sbjct: 314 EYALQELTEVLIAEITTVLFCTGNRNLYQLQYSNSLQSIQ 353 >gi|89094691|ref|ZP_01167627.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Oceanospirillum sp. MED92] gi|89081037|gb|EAR60273.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Oceanospirillum sp. MED92] Length = 342 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 202/335 (60%), Positives = 260/335 (77%), Gaps = 1/335 (0%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + NDRKI+HI + KDP DR+ +FD L HRALPE++ ++D +FLG +LSFP+L Sbjct: 4 LTNDRKIEHIQAIEKDPQTDRSGHYFDRIRLSHRALPELNLGDIDTGCDFLGYRLSFPML 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG++++I+RINRNLA AAE+ VAMAVGSQRVMF+ A +SF LR++AP LI Sbjct: 64 ISSMTGGDHELIKRINRNLAEAAERCNVAMAVGSQRVMFTTPEAKESFRLREFAPSVPLI 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGAVQLNY +A A+ VL AD L+LHLNPLQE +QP G+T+F+ L+ KI L+S Sbjct: 124 GNLGAVQLNYGIEKAQAEAAISVLEADALYLHLNPLQEAVQPEGDTDFSGLAEKIKKLAS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-SDIGIVFQ 239 +DVP+LLKEVG GLS DIELGL+SGI+ FD+AG GGTSWSRIE HR + SD+G+ FQ Sbjct: 184 ELDVPVLLKEVGSGLSPADIELGLQSGIKCFDVAGSGGTSWSRIEHHRRKDSSDLGLKFQ 243 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+PTPL+L+MA PY + A +ASGGLR+G+D++KS+ILGASL G+A+P LKPAM+S+D Sbjct: 244 DWGLPTPLALKMAEPYLSSATIVASGGLRDGIDMVKSVILGASLCGMAAPLLKPAMESAD 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AVVA IE ++ EF +MFLLG ++ LY N ALI Sbjct: 304 AVVAEIEKIKTEFRTAMFLLGVPDMRTLYNNHALI 338 >gi|218441508|ref|YP_002379837.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 7424] gi|218174236|gb|ACK72969.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7424] Length = 351 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 133/336 (39%), Positives = 200/336 (59%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+ + ++ R F+++ H LPE +++ FLGK+L +PLL Sbjct: 13 IETRKADHLRVCLEEDVQFQRVTSGFENYRFTHCCLPEFDRKDINLQTRFLGKELGYPLL 72 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA A++ +AM VGSQR+ +F +R +AP+ +L+ Sbjct: 73 ISSMTGGTE-LARLVNTRLATVAQRYGLAMGVGSQRIALEQPQLASTFAVRSFAPNILLL 131 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY GV++ + +L AD L LHLNPLQE +Q G+TNF L +KIA L Sbjct: 132 ANLGAVQLNYGCGVKECLHLIEILEADALILHLNPLQECVQSKGDTNFRGLLAKIAQLCQ 191 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP+++KEVG G+S+ + +++G+ D+AG GGTSW+++ES R + +G V Sbjct: 192 QLPVPVVVKEVGNGISAPMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDKKQRRLGQV 251 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WGIPT + R IASGG++NG+D+ K++ LGA L GLA PFL+ A++S Sbjct: 252 FAEWGIPTAECITTIREMFPTIPLIASGGIKNGLDVAKALALGADLVGLARPFLEAAVES 311 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV ++ L E ++F G V +L + L Sbjct: 312 EAAVDEFVDFLIAELETALFCTGNSTVSQLKNSGVL 347 >gi|17232083|ref|NP_488631.1| isopentenyl pyrophosphate isomerase [Nostoc sp. PCC 7120] gi|20978482|sp|Q8YNH4|IDI2_ANASP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|17133727|dbj|BAB76290.1| all4591 [Nostoc sp. PCC 7120] Length = 350 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 141/340 (41%), Positives = 197/340 (57%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCKDPGIDR-NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I ++ R + + H LPEI +++D S FLGKKL+ PLL Sbjct: 12 TQSRKADHIRICLEEDVQFRDTTNGLERYRFTHSCLPEIDRNDIDLSATFLGKKLNAPLL 71 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+ LA A+ K+AM VGSQRV +F +R+YAP +L Sbjct: 72 ISSMTGGTEEA-GIINQRLAGLAQHYKLAMGVGSQRVAVEKPQVADTFAIRKYAPDVLLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +G+ + + + +L AD L LH+NPLQE IQP G+ NF L KI L S Sbjct: 131 ANVGAVQLNYKYGLDECLRIIDMLEADALILHINPLQECIQPRGDVNFRGLLDKINQLCS 190 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP + KEVG G+S E + +G++ D+AG GGTSW+++E R ++ +G Sbjct: 191 KLPVPAIAKEVGNGISGAMAEKLIAAGVQAIDVAGAGGTSWAKVEGERAENAMQRRLGRT 250 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R IASGGLR+G+D+ K+I LGA + GLA PFL+ A++S Sbjct: 251 FADWGMPTAECITSVRAIAPHIPLIASGGLRDGLDVAKAIALGADIAGLAMPFLQAAVES 310 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ E L E +F G + +L + +L R Q Sbjct: 311 EAALQDLTEVLIAEITTVLFCTGNANLDQLKHSGSLQRLQ 350 >gi|75908675|ref|YP_322971.1| isopentenyl pyrophosphate isomerase [Anabaena variabilis ATCC 29413] gi|91207069|sp|Q3MAB0|IDI2_ANAVT RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|75702400|gb|ABA22076.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Anabaena variabilis ATCC 29413] Length = 350 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 140/340 (41%), Positives = 196/340 (57%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I ++ + + H LPEI +++D S FLGKKL+ PLL Sbjct: 12 TQSRKADHIRICLEEDVQFRATTNGLERYRFNHSCLPEIDRNDIDLSATFLGKKLNAPLL 71 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+ LA A+ K AM VGSQRV +F +R+YAP +L Sbjct: 72 ISSMTGGTEQA-GIINQRLARLAQDYKFAMGVGSQRVALEKPQVADTFAIRKYAPDVLLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +G+ + + + +L AD L LH+NPLQE IQP G+ NF L KI+ L Sbjct: 131 ANVGAVQLNYKYGLDECLRIIDMLEADALILHINPLQECIQPKGDVNFQGLLDKISELCE 190 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S + + +G++ D+AG GGTSW+++E R ++ +G Sbjct: 191 ELSVPVIAKEVGNGISGAMAKKLIAAGVQVIDVAGAGGTSWAKVEGERAENSMQRRLGRT 250 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + R IASGGLR+G+DI K+I LGA + GLA PFL+ A++S Sbjct: 251 FADWGIPTAECITSVRAIAPHIPLIASGGLRDGLDIAKAIALGADIAGLAMPFLQAAVES 310 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ E L E +F G + +L + +L R Q Sbjct: 311 EAALQELAEVLIAEITTVLFCTGNATLHQLKHSGSLQRLQ 350 >gi|220908957|ref|YP_002484268.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. PCC 7425] gi|219865568|gb|ACL45907.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7425] Length = 347 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 138/336 (41%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ + + + F+ + H LPE+++ ++D FLGK L PLL Sbjct: 11 TEARKAEHLRVCLDENVQCTQVSTGFERYRFNHSCLPELNYSDIDLQTTFLGKTLGAPLL 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+ LA A++ ++AM VGSQRV + + K+F++R AP +L Sbjct: 71 ISSMTGGTE-LARIINQRLARVAQEYRIAMGVGSQRVAVENPDTEKTFKVRSLAPDILLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNYD+G+ + + V L AD L LHLNPLQE +Q G+ NFA L KIA L Sbjct: 130 ANLGAVQLNYDYGLTECLRVVEFLEADALILHLNPLQEAVQTRGDRNFAGLLDKIAQLCD 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + +P++ KEVG G+S++ +++G+ D+AG GGTSW+R+ES R L+ +G Sbjct: 190 RLPIPVIAKEVGNGISAVMAGKLMEAGVSAIDVAGAGGTSWARVESERATDPLQRRLGQT 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT L R + IASGGLRNG+++ K+I LGA L GLA PFL+ A +S Sbjct: 250 FADWGIPTAECLTTIRARYPQIPLIASGGLRNGLEVAKAIALGADLAGLALPFLQAANES 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + + L E +F G + EL + L Sbjct: 310 EERLDELADILIAEISTVLFCTGNANLTELKTSNCL 345 >gi|282899428|ref|ZP_06307395.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Cylindrospermopsis raciborskii CS-505] gi|281195692|gb|EFA70622.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Cylindrospermopsis raciborskii CS-505] Length = 348 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 142/337 (42%), Positives = 196/337 (58%), Gaps = 5/337 (1%) Query: 1 MVNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DHI I ++ D+ + + +H LPE E+D S +FL + L PL Sbjct: 10 LIQNRKADHIRICLEENVQSDQITTGLEKYRFVHCCLPEQDGKEIDISTKFLNRDLHAPL 69 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + INR LA A+K ++AM VGSQRV+ +F +RQYAP +L Sbjct: 70 LISSMTGGTQRA-GIINRRLAEIAQKYRLAMGVGSQRVLLEKPEVADTFAIRQYAPDVLL 128 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY G+ + + + L AD L LH+NPLQE IQP G+TNF L KIA L Sbjct: 129 FANLGAVQLNYQCGIDECLRIIDALEADALILHINPLQEFIQPRGDTNFYGLLDKIAQLC 188 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 + VP++ KEVG G+S E + +G++ D+AG GGTSW+ +ES R L+ +G Sbjct: 189 QQLPVPVIAKEVGNGISVNMAEKLISAGVQAIDVAGAGGTSWALVESERAETALQRRLGK 248 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGI T + R + IASGGLRNG+D+ K+I LG+ + GLA PFL+ A Sbjct: 249 TFANWGISTAECITTIRSRFPQLPLIASGGLRNGLDVAKAIALGSDIAGLAMPFLQSADV 308 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S A+ E L E +F G + + EL + L Sbjct: 309 SISALEELTEVLIAEITTVLFCTGNRNLHELKQSNCL 345 >gi|170077750|ref|YP_001734388.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. PCC 7002] gi|169885419|gb|ACA99132.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7002] Length = 342 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 143/336 (42%), Positives = 196/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI I ++ N+ F+ + H LPE+ ++D + FLGK+L P+L Sbjct: 5 TQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLGAPIL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + ++IN LA A+ ++AM VGSQRV +F +RQ AP +L Sbjct: 65 ISSMTGGTAQA-QQINFRLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDALLF 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY +GV++ + V +L AD L LHLNPLQE IQP G+TNF L KI + Sbjct: 124 ANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQECIQPQGDTNFKGLLDKIEQVCH 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S ++ + G++ D+AG GGTSW+++E+ R L ++G Sbjct: 184 QLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNLGQT 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT L Y E IASGGLRNG+D K+I LGA L G A PFLK A +S Sbjct: 244 FGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAASES 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +A+ +E L E +F G Q+L L Sbjct: 304 PEALAEWVELLLLELRTVLFCTGNANFQQLQRANCL 339 >gi|282897593|ref|ZP_06305593.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Raphidiopsis brookii D9] gi|281197516|gb|EFA72412.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Raphidiopsis brookii D9] Length = 348 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 141/336 (41%), Positives = 194/336 (57%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK DHI I ++ D+ + + +H LPE ++D S +FL L PLL Sbjct: 11 IQNRKADHIRICLEEDVQSDQITTGLEKYRFVHCCLPEQDGKQIDISTKFLNWDLRAPLL 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + INR LA A+K ++ M VGSQRV+ +F +RQYAP +L Sbjct: 71 ISSMTGGTQRA-GIINRRLAEIAQKYRLVMGVGSQRVLLEKPEVADTFAIRQYAPDVLLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G+ + + + VL AD L LH+NPLQE IQP G+TNF L KIA L Sbjct: 130 ANLGAVQLNYQCGIDECLRIIDVLEADALILHINPLQEFIQPRGDTNFYGLLDKIAQLCK 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + +P++ KEVG G+S E + +G++ D+AG GGTSW+ +ES R L+ +G Sbjct: 190 QLPIPVIAKEVGNGISVNMAEKLISAGVQAIDVAGAGGTSWALVESERAETPLQRRLGKT 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WGIPT + R + IASGGLRNG+D K+I LG+ + GLA PFL+ A S Sbjct: 250 FANWGIPTAECITTIRSRFPQLPLIASGGLRNGLDAAKAIALGSDIAGLAMPFLQSADVS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ E L E +F G + + EL + L Sbjct: 310 ITALEELTEVLIAEITTVLFCTGNRNLHELKQSNCL 345 >gi|86610118|ref|YP_478880.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558660|gb|ABD03617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 379 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 140/341 (41%), Positives = 209/341 (61%), Gaps = 8/341 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DH++IV + + + F+ + H ALPE+ E+D S EFLGK+L PLL Sbjct: 35 ISERKQDHLDIVLQQDVAAKGIRTGFERFFFEHVALPELLLPEIDLSCEFLGKRLQAPLL 94 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG +NR LA AA++ +AM VGSQR +++++RQ AP+ +L+ Sbjct: 95 ISSMTGGTE-AAHELNRQLAAAAQQLGIAMGVGSQRAALEHPELARTYQVRQVAPNILLL 153 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+++A +AV ++ AD L LHLNPLQE +QP G+ ++ L +I L + Sbjct: 154 ANLGAVQLNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVA 213 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 + VP+++KEVG GLS+ + + G+ D+AG GGTSWS +E+HR ++ I Sbjct: 214 QLPVPVVVKEVGNGLSAKVAQRLAECGVAALDVAGAGGTSWSEVEAHRQPDALKKRIAHS 273 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT LSL R + +ASGG+RNG+D K+I LGA + G+A+P L Sbjct: 274 FRDWGIPTALSLLEIRRLLPDLPLVASGGIRNGIDAAKAIRLGADVVGMAAPALHAVSQG 333 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AVV ++ +E ++ F G+ + L T +R Q Sbjct: 334 QMQAVVDTFRAVIEELRIAAFCTGSANLARLRQAT--LRRQ 372 >gi|320161453|ref|YP_004174677.1| isopentenyl-diphosphate delta-isomerase [Anaerolinea thermophila UNI-1] gi|319995306|dbj|BAJ64077.1| isopentenyl-diphosphate delta-isomerase [Anaerolinea thermophila UNI-1] Length = 342 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 144/335 (42%), Positives = 204/335 (60%), Gaps = 4/335 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK DHI I ++ + + IH ALPE++ +E+D +E GK L+ P+LI Sbjct: 7 TESRKSDHIRINLEEDVRSALTTGLERFFFIHEALPEVNLEEIDLHLELFGKTLNAPILI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K IN+ LA AA+ T +AM VGSQRV + A SF++RQ+AP +L + Sbjct: 67 SSMTGGTEKA-GLINQRLAEAAQATGIAMGVGSQRVALENPQAGASFQIRQFAPDILLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQLNY + V+ +AV ++ AD L LHLN LQE IQP G+T FA L KI + Sbjct: 126 NIGAVQLNYGYAVEHCQRAVDMIQADALILHLNSLQEAIQPEGDTRFAGLLGKIEQVCKQ 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP++ KEVG G+S + + +G+ D+AG GGTSWS++E +R + + I F Sbjct: 186 VSVPVIAKEVGWGISERTARMLVDAGVSAIDVAGAGGTSWSQVEMYRIQDERRARIAAAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 ++WGIPT S++M + IASGGL+ GVDI K I LGA +GG+A FLK A S+ Sbjct: 246 RNWGIPTAYSIQMVKKVAPHVPIIASGGLKTGVDIAKCIALGACMGGMAGQFLKAATQST 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AV+ IE R+E ++MF +G ++ L + Sbjct: 306 EAVIELIEETREEIRITMFGVGAANLKALSSTPLI 340 >gi|219847383|ref|YP_002461816.1| isopentenyl pyrophosphate isomerase [Chloroflexus aggregans DSM 9485] gi|219541642|gb|ACL23380.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus aggregans DSM 9485] Length = 346 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 139/334 (41%), Positives = 193/334 (57%), Gaps = 7/334 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK+DHI IV + + F + L HRALPE+ +EVD FLGK ++ PLL Sbjct: 7 TESRKVDHIRIVLNEDVAAKGVVTGFAAYRLPHRALPELDLNEVDTRTTFLGKPIAAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG E+IN LA AAE + M VGSQR D ++++R+ AP L+ Sbjct: 67 ISSMTGGT-ASAEKINLTLAEAAEYLGLPMGVGSQRAAVMDPRLASTYQVRRVAPRIPLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY F V +AV ++ AD L LHLNPLQE +QP G+ NF L +KI + Sbjct: 126 ANVGAVQLNYGFTVDHCRRAVEMIEADALILHLNPLQEAVQPEGDVNFKGLLNKIEEVCR 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 ++VP+++KEVG G+ + D + G+R D+AG GGTSWS +E R + Sbjct: 186 RLEVPVVVKEVGNGIGAADAIRLYEVGVRIIDVAGAGGTSWSEVERFRQPNDTGRRVASA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F DWG+PT + R + IASGG+R+GVD+ K+I LGA L G A P L A++ Sbjct: 246 FADWGLPTTECVREVRAALPDVTLIASGGVRSGVDVAKAIALGADLAGTARPALFDAINE 305 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++AV+ + + +E V+MF G + EL Sbjct: 306 RGAEAVIEGLSAFIRELRVAMFCSGCANLSELRN 339 >gi|158337495|ref|YP_001518670.1| isopentenyl pyrophosphate isomerase [Acaryochloris marina MBIC11017] gi|158307736|gb|ABW29353.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acaryochloris marina MBIC11017] Length = 349 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 195/338 (57%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+ I D F+ + H LPE++ +++ S FLGK L PLL Sbjct: 12 IKTRKADHLRICLDDKVQCKSITTGFEQYRFQHCCLPELALEDIQLSTTFLGKSLGAPLL 71 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN+ LAI A++ K+AM VGSQRV +F +R +AP L Sbjct: 72 ISSMTGGTE-LAKTINQRLAIVAQEFKIAMGVGSQRVAVEHPQVADTFAVRSHAPDIPLF 130 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY + + +++ +L AD L LHLNPLQE IQ +G+TNF +L ++I L Sbjct: 131 ANLGAVQLNYGYNLDACRRSIDLLEADALILHLNPLQECIQSHGDTNFRNLFTQIGKLCQ 190 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP+++KEVG G+S+ + G+ D+AG GGTSW+++E R + +G Sbjct: 191 QLPVPVIVKEVGNGISAPLAIRLVDVGVAAIDVAGAGGTSWAKVEGERAEDIRQRRLGQT 250 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + ++ IASGGLRNG+D K++ LGA + G+A PFL+ A +S Sbjct: 251 FSDWGLPTAECVASIFQANSKIPLIASGGLRNGLDAAKALALGADVAGMAYPFLQAAHES 310 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+ +E L E +F G + +L + L++ Sbjct: 311 EAALHTLMEMLIAELETVLFCTGNATITDLQASQCLLQ 348 >gi|307153336|ref|YP_003888720.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7822] gi|306983564|gb|ADN15445.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. PCC 7822] Length = 344 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 134/338 (39%), Positives = 194/338 (57%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + ++ + + H LPEI ++D FLGK L PLL Sbjct: 7 IESRKAEHLRVCLEEDVQFREVTSGLEQYRFTHCCLPEIDRRDIDLRTTFLGKSLGAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA A+ ++AM VGSQR+ + +F +R AP +L+ Sbjct: 67 ISSMTGGTE-LARLVNTRLATVAQHYRLAMGVGSQRIALEQPHLAPTFAVRSLAPDILLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G+++ V +L AD L LHLNPLQE +Q G+TNF L SKIA L Sbjct: 126 ANLGAVQLNYGCGLEECLHLVDLLEADVLILHLNPLQECVQTKGDTNFRGLLSKIAELCQ 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP+++KEVG G+S+ + +++G+ D+AG GGTSW+++ES R + +G Sbjct: 186 KLPVPVMVKEVGNGISAPMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDKKQRRLGQT 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + R IASGG++NG+D K++ LGA L GLA PFL+ A++S Sbjct: 246 FADWGIPTAECITSIREIAPSIPLIASGGIKNGLDAAKALALGADLAGLARPFLEAAVES 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 AV +E L E ++ G + +L + AL R Sbjct: 306 ESAVEQLVEFLIAELETALLCTGNTTLSQLKSSGALQR 343 >gi|146329192|ref|YP_001209698.1| isopentenyl pyrophosphate isomerase [Dichelobacter nodosus VCS1703A] gi|146232662|gb|ABQ13640.1| isopentenyl-diphosphate delta-isomerase [Dichelobacter nodosus VCS1703A] Length = 344 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 184/335 (54%), Positives = 247/335 (73%), Gaps = 2/335 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +NDRKI+H+ + +D GI+R FD LIHRALPEI + ++D FLGK LSFPL+I Sbjct: 5 INDRKIEHLAAIERDNGIERYNSGFDRIQLIHRALPEIDYGDIDTRCTFLGKTLSFPLII 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+N+++ RINRNLA AA++ +VAMAVGSQRVM + ++ SF LR +AP +L++ Sbjct: 65 SSMTGGDNEVLRRINRNLATAAQQCRVAMAVGSQRVMMRNKDSRDSFALRPFAPDALLLA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQLN FG+++ QAV VL ADGL+ HLNPLQE +QP G+TNFA L+ K+A ++ Sbjct: 125 NLGAVQLNAGFGIKECRQAVDVLEADGLYFHLNPLQEAVQPEGDTNFAHLTEKMAAINRE 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD--LESDIGIVFQ 239 + VPLLLKEVGCGLS DIELG+ +GIR FDIAGRGGTSWSRIE HR + D+G+VFQ Sbjct: 185 LSVPLLLKEVGCGLSPEDIELGISAGIRIFDIAGRGGTSWSRIEYHRRTHPDDDLGLVFQ 244 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+ T +L++A E F+ASGG+R+G+D++K+++LGA + G+A+P L AM S+D Sbjct: 245 DWGLSTAQALKLAYKTHPEMTFVASGGIRSGIDMVKAVVLGAQVCGVAAPLLPFAMQSAD 304 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AV I L++E+ +MFLLG + +L I Sbjct: 305 AVCRYIRQLQREYRTAMFLLGCSQNDQLRWQEKFI 339 >gi|113475280|ref|YP_721341.1| isopentenyl pyrophosphate isomerase [Trichodesmium erythraeum IMS101] gi|110166328|gb|ABG50868.1| isopentenyl-diphosphate delta-isomerase, type 2 [Trichodesmium erythraeum IMS101] Length = 345 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 136/336 (40%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DH+ + + D + D + H LPE++ E+D FLGK+L PLL Sbjct: 7 TQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQLGAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN LA A+ K+AM VGS+RV + +F +R AP +L Sbjct: 67 ISSMTGGTEQA-KMINYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAPDILLF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY++G+ + +A+ +L AD L LHLNPLQE IQ G+TNF + KI+ L Sbjct: 126 ANLGAVQLNYNYGIDQCQRAIDILEADALILHLNPLQECIQTEGDTNFRGILDKISKLCY 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 ++ VP++ KEVG G+S + + +G+ D+AG GGTSW++IE R L+ +G Sbjct: 186 SLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQRRLGNT 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WG+PT + R ++ IASGGLRNG+++ K+I LGA L GLA PFL+ A+ S Sbjct: 246 FGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQAAVKS 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +++ ++ L E +F G + EL + AL Sbjct: 306 EESLNLLVDILIAEITTVLFCTGNANLLELKKSQAL 341 >gi|163849399|ref|YP_001637443.1| isopentenyl pyrophosphate isomerase [Chloroflexus aurantiacus J-10-fl] gi|222527397|ref|YP_002571868.1| isopentenyl pyrophosphate isomerase [Chloroflexus sp. Y-400-fl] gi|163670688|gb|ABY37054.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus aurantiacus J-10-fl] gi|222451276|gb|ACM55542.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroflexus sp. Y-400-fl] Length = 346 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 140/334 (41%), Positives = 194/334 (58%), Gaps = 7/334 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RKIDHI IV + + F + L HRALPE+ +EVD FLGK ++ PLL Sbjct: 7 TESRKIDHIRIVLHEDVAAKGIVTGFAAYRLPHRALPELDLNEVDTRTTFLGKPIAAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG E+IN LA AAE + M VGSQR D ++++R+ APH L+ Sbjct: 67 ISSMTGGT-ASAEKINLALAEAAEYLGLPMGVGSQRAAVMDPRLASTYQVRRVAPHIPLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GAVQLNY F V +AV ++ AD L LHLNPLQE +QP G+ NF L ++I + Sbjct: 126 ANVGAVQLNYGFTVDHCRRAVEMIEADALILHLNPLQEAVQPEGDVNFKGLLARIEEVCR 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 ++VP+++KEVG G+ + D + G+R D+AG GGTSWS +E R + Sbjct: 186 RLEVPVIVKEVGNGIGAADAIRLYEVGVRIIDVAGAGGTSWSEVERFRQPNDTGRRVASA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F DWG+PT + R + IASGG+R+GVD+ K+I LGA L G A P L A++ Sbjct: 246 FADWGLPTTECIREVRAALPDVTLIASGGVRSGVDVAKAIALGADLAGTARPALFDAINE 305 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++AV+ + + +E V+MF G +Q L Sbjct: 306 RGAEAVIEGLGAFIRELRVAMFCSGCANLQALRN 339 >gi|186681713|ref|YP_001864909.1| isopentenyl pyrophosphate isomerase [Nostoc punctiforme PCC 73102] gi|186464165|gb|ACC79966.1| isopentenyl-diphosphate delta-isomerase, type 2 [Nostoc punctiforme PCC 73102] Length = 349 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 195/338 (57%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK DHI I ++ + + H LPE++ D++D S FLGK L PLL Sbjct: 11 TQNRKADHIRICLEEDVQSHQITNGLERYRFTHSCLPELNHDDIDISTAFLGKHLGAPLL 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N+ LA A+ K+AM VGSQRV +F +R+YAP +L Sbjct: 71 ISSMTGGTEQAA-ILNQRLAQVAQHYKIAMGVGSQRVAVEKPQVADTFAVRKYAPDVLLF 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+ + + V +L AD L LH+NPLQE IQP G+TNF L KI+ L Sbjct: 130 ANLGAVQLNYKYGLDECLRVVDILEADALILHINPLQECIQPKGDTNFRGLIDKISTLCF 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP++ KEVG G+S+ + +G+ D+AG GGTSW+++ES R L+ +G Sbjct: 190 KLPVPVIAKEVGNGISAAIANKLIAAGVAAIDVAGAGGTSWAKVESERAENPLQRRLGKT 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGLR+G+D+ +I LGA + GLA PFL+ A S Sbjct: 250 FADWGLPTAECITTIRAIAPDVPLIASGGLRHGLDVAAAIALGADIAGLAMPFLQAAAIS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 AV E L E +F G + +L + +L R Sbjct: 310 ETAVAELAEVLIAEITTVLFCTGNATLYQLKHSGSLQR 347 >gi|18977228|ref|NP_578585.1| isopentenyl pyrophosphate isomerase [Pyrococcus furiosus DSM 3638] gi|32129641|sp|Q8U2H9|IDI2_PYRFU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|18892889|gb|AAL80980.1| hypothetical protein PF0856 [Pyrococcus furiosus DSM 3638] Length = 394 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 196/339 (57%), Gaps = 11/339 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SV+FLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRNVEAHATNGFEDVHFVHMSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 69 Query: 65 TGGNNKM--IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K +INR LA AAE+ + + VGSQR M +S+ +R AP+ L+ N Sbjct: 70 TGGTRKGEVAWKINRTLAQAAEELNIPLGVGSQRAMIEKPETWESYYVRDVAPNVFLVGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++ A+ + AD + +H+NPLQE +QP G+T F+ + +A + Sbjct: 130 LGAPQFGRNAKRKYGVKEVLYAIEKIDADAIAIHMNPLQESVQPEGDTTFSGVLEALAEI 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 +S++D P++ KE G G+S G+ DI+G GGTSWS +E +R +L + Sbjct: 190 TSSIDYPVIAKETGAGVSKEVAIKLESIGVSAIDISGVGGTSWSGVEYYRAKDELGKRLA 249 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +SL R + IASGG+R+G+ + K++ +GASL G+A P LKPA Sbjct: 250 LRFWDWGIKTAISLAEVR-FSTNLPIIASGGMRDGITMAKALAMGASLVGIALPVLKPAA 308 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V+ I+ +E +MFL+G + V+EL + Sbjct: 309 KGDVEGVIKVIKGYVEEIKNAMFLVGARNVEELRKVPIV 347 >gi|86607021|ref|YP_475784.1| isopentenyl pyrophosphate isomerase [Synechococcus sp. JA-3-3Ab] gi|86555563|gb|ABD00521.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. JA-3-3Ab] Length = 391 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 138/341 (40%), Positives = 209/341 (61%), Gaps = 8/341 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DH++IV + R + F+ + H ALPE+ E+D S +FLGK+L PLL Sbjct: 41 ISERKQDHLDIVLRQDVNARGIRTGFERFFFEHVALPELLLPEIDLSCQFLGKRLQAPLL 100 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA AA++ +AM VGSQR +++++R AP +L+ Sbjct: 101 ISSMTGGTD-TARELNLYLAAAAQELGIAMGVGSQRAALEHPELAQTYQVRPVAPDILLL 159 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+++A +AV ++ AD L LHLNPLQE +QP G+ ++ +L +I L + Sbjct: 160 ANLGAVQLNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRNLYRRIEQLVN 219 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + VP+L+KEVG GLS+ + G+ D+AG GGTSWS +E+HR L+ I Sbjct: 220 QLPVPVLVKEVGNGLSAQVARRLAECGVAALDVAGAGGTSWSEVEAHRQTDPLQKRIAHS 279 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L+L R + +ASGG+R G+D K+I LGA + G+A+P L Sbjct: 280 FRDWGIPTALALLEIRRFLPNLPLVASGGIRTGIDAAKAIRLGADVVGMAAPALHAVSRG 339 Query: 298 -SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + AVV + ++ +E ++ F G+ + +L A +R Q Sbjct: 340 RAQAVVDSFRAVIEELRIAAFCTGSANLAQLRQ--AALRWQ 378 >gi|312137120|ref|YP_004004457.1| isopentenyl-diphosphate delta-isomerase [Methanothermus fervidus DSM 2088] gi|311224839|gb|ADP77695.1| isopentenyl-diphosphate delta-isomerase [Methanothermus fervidus DSM 2088] Length = 359 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 200/338 (59%), Gaps = 9/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK++H+ + + K F D LIHRALPEI+ DE+D SV FLGKKL P + Sbjct: 7 LTSNRKLEHLILCLCRDVEHKKKSGFQDIELIHRALPEINKDEIDISVNFLGKKLESPFM 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I+ +TGG+ + +IN+ LA AA+ T VA+ +GSQRV + ++ +R+ A + Sbjct: 67 ITGITGGHE-ISYKINKELAKAAKATGVALGLGSQRVAIENPELEYTYTIVREVAEDAFI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+G V+ A +AV ++ AD L +HLNPLQE IQP G T+ KI + Sbjct: 126 IGNIGVSH------VKYAKKAVEMVDADALAIHLNPLQEAIQPEGITHSKKTLEKIGKIV 179 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +DVP+++KE G G+ D +L G+ D+AG GGTSWS +E++R S +G ++ Sbjct: 180 KELDVPVIVKETGAGICYEDAKLLKNKGVAAIDVAGAGGTSWSAVEAYRSKNSHLGKLYW 239 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT +S R + IASGG+R G+D K+I LGA + G+A P +K A Sbjct: 240 DWGIPTAISTVEVREAV-DIPVIASGGIRTGLDAAKAIALGADIVGMALPIMKKAFFGYK 298 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V++ IE+ +E ++M+L+G K ++EL +IR + Sbjct: 299 EVISFIENFNEELKIAMYLVGAKNIEELKKCPLVIRGK 336 >gi|315229909|ref|YP_004070345.1| isopentenyl-diphosphate delta-isomerase [Thermococcus barophilus MP] gi|315182937|gb|ADT83122.1| isopentenyl-diphosphate delta-isomerase [Thermococcus barophilus MP] Length = 373 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 129/342 (37%), Positives = 196/342 (57%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F++ H +H +LPEI DE+D SVEFLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRQVEAHVTNQFENIHFVHTSLPEIDKDEIDLSVEFLGRKFDYPIMIAGM 69 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M + +S+ +R AP LI N Sbjct: 70 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRNPETWESYYVRDVAPDIFLIGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 130 LGAPQFAETMPDRYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGILKALAEL 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 S P++ KE G G+S GI D+ G GGTSWS +E +R + ++ Sbjct: 190 KSEFPYPIIAKETGAGVSMEVAIKLESIGIDAVDVGGLGGTSWSGVEYYRAKDERSRNLA 249 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGIPT +S+ + Y + IA+GG+R+G+ I K++ LGA+L G+A P LKPA+ Sbjct: 250 LKFWDWGIPTAISVVEVK-YATDLPIIATGGIRDGIMIAKALALGANLAGVALPLLKPAV 308 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ ++ E +MFL+G + V+EL +I Sbjct: 309 KGDVEGVIRVLQRYIDELRNAMFLVGARDVEELRKVPLVITG 350 >gi|78486059|ref|YP_391984.1| isopentenyl pyrophosphate isomerase [Thiomicrospira crunogena XCL-2] gi|91207080|sp|Q31EW3|IDI2_THICR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78364345|gb|ABB42310.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Thiomicrospira crunogena XCL-2] Length = 343 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 249/336 (74%), Gaps = 3/336 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI+ + +D I+R + FD L HR LPE + +VD FL LSFPLLI Sbjct: 6 ITQRKQDHIDWLLQDEKIERQQAGFDQIQLTHRGLPECDYAQVDSGTTFLQHSLSFPLLI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + + IN NLA AAE +VAMAVGSQR M D A KSF+LRQ+AP LI+ Sbjct: 66 SSMTGGASNALNTINENLARAAEHCQVAMAVGSQRTMILDRKAEKSFQLRQFAPTVPLIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA+QLNY FG +A + V VL AD L+LHLNPLQE+IQP G+TNFA L+ KIA L + Sbjct: 126 NMGAIQLNYGFGYDEAQRMVEVLEADALYLHLNPLQEVIQPEGDTNFAKLAEKIAHLKNH 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP++LKEVGCGLS DI+LGL +GI +FD+AGRGGTSWSRIE+HR ++++G +F Sbjct: 186 LSVPIILKEVGCGLSEKDIQLGLDAGIEWFDLAGRGGTSWSRIEAHRTEDSQQAELGKMF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 QDWG+ TP +L+ ARP+ ++AQFIASGG+RNG+D++KS+I+GA + G+A+P LKPAM S+ Sbjct: 246 QDWGLTTPQALKQARPFQSQAQFIASGGIRNGIDMVKSVIMGAQICGVAAPLLKPAMAST 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A + IE L++EF + FLLG ++ +L+LN +LI Sbjct: 306 NATIGTIEQLQQEFRTAQFLLGMPKMADLFLNDSLI 341 >gi|150248255|gb|ABR67590.1| type 2 isopentenyl diphosphate isomerase [Pyrococcus furiosus DSM 3638] Length = 374 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 196/339 (57%), Gaps = 11/339 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SV+FLG+K +P++I+ M Sbjct: 10 RKFEHIEHCLKRNVEAHATNGFEDVHFVHMSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 69 Query: 65 TGGNNKM--IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K +INR LA AAE+ + + VGSQR M +S+ +R AP+ L+ N Sbjct: 70 TGGTRKGEVAWKINRTLAQAAEELNIPLGVGSQRAMIEKPETWESYYVRDVAPNVFLVGN 129 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++ A+ + AD + +H+NPLQE +QP G+T F+ + +A + Sbjct: 130 LGAPQFGRNAKRKYGVKEVLYAIEKIDADAIAIHMNPLQESVQPEGDTTFSGVLEALAEI 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 +S++D P++ KE G G+S G+ DI+G GGTSWS +E +R +L + Sbjct: 190 TSSIDYPVIAKETGAGVSKEVAIKLESIGVSAIDISGVGGTSWSGVEYYRAKDELGKRLA 249 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +SL R + IASGG+R+G+ + K++ +GASL G+A P LKPA Sbjct: 250 LRFWDWGIKTAISLAEVR-FSTNLPIIASGGMRDGITMAKALAMGASLVGIALPVLKPAA 308 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V+ I+ +E +MFL+G + V+EL + Sbjct: 309 KGDVEGVIKVIKGYVEEIKNAMFLVGARNVEELRKVPIV 347 >gi|222840493|gb|ACM68685.1| AerK [Microcystis aeruginosa NIES-98] Length = 347 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 132/336 (39%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK +H+ + KD + + + H LPE+ +++ FLGK L P+L Sbjct: 10 IENRKSEHLRVCIEKDVEFQQLTSGLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPIL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA A++ +AM VGSQR+ +F +R AP +L+ Sbjct: 70 ISSMTGGTE-LAHLVNTRLATVAQRYGLAMGVGSQRIALEQPELAPTFAVRSLAPDILLL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + + Sbjct: 129 ANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQICA 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G V Sbjct: 189 QLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQV 248 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGL+NG+D+ KSI LGA LGGLA PFL A++S Sbjct: 249 FADWGLPTAECITAIRSMNSTIPLIASGGLKNGLDLAKSIALGADLGGLARPFLVAAIES 308 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV ++ L E + +F G + L + AL Sbjct: 309 EAAVDELVKFLIAELEIVLFCTGNPNLSTLKTSGAL 344 >gi|240103883|ref|YP_002960192.1| isopentenyl pyrophosphate isomerase [Thermococcus gammatolerans EJ3] gi|239911437|gb|ACS34328.1| Isopentenyl-diphosphate delta-isomerase (fni) [Thermococcus gammatolerans EJ3] Length = 375 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 127/342 (37%), Positives = 193/342 (56%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P+ I+ M Sbjct: 16 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIFIAGM 75 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 76 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 135 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 136 LGAPQFSETIPERYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 195 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 + P++ KE G G+S GI D+ G GGTSWS +E +R + ++ Sbjct: 196 KAEFPYPIIAKETGAGVSKEVAVRLESIGIDAIDVGGLGGTSWSAVEYYRAKDEMGRNLA 255 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P LKPA+ Sbjct: 256 LRFWDWGIKTAISVAEVR-YSTELPIIATGGMRDGITMAKALAMGATFAGVALPLLKPAV 314 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ + +E +MFL+G K V+EL +I Sbjct: 315 KGDVEGVIKILRRYIEEIRNAMFLVGAKNVEELRRVPLVITG 356 >gi|67922174|ref|ZP_00515689.1| Isopentenyl-diphosphate delta-isomerase [Crocosphaera watsonii WH 8501] gi|67856074|gb|EAM51318.1| Isopentenyl-diphosphate delta-isomerase [Crocosphaera watsonii WH 8501] Length = 356 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 142/341 (41%), Positives = 200/341 (58%), Gaps = 7/341 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DHINIV + + F+ + + H ALP++ DEVD S++ GK L PL Sbjct: 11 LIENRKADHINIVLEKDVTGKGITTGFEQFFMEHDALPDVDLDEVDLSLQVWGKTLQAPL 70 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA A+ +AM VGSQR N K++++R AP +L Sbjct: 71 LISSMTGGTDNA-HFINLNLAETAQALGIAMGVGSQRAGIEQPNLGKTYQIRGVAPDILL 129 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L +KIA L+ Sbjct: 130 FANLGAVQLNYGYGIDEAKKAVDMIEADALILHLNPLQEAVQAEGDRNWKGLYNKIATLA 189 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 + +DVP++ KEVG G+S G+ DIAG GGTSWS +E++R+ + I Sbjct: 190 TKLDVPIIAKEVGNGISGKIARRLADCGVSAIDIAGAGGTSWSEVEAYRESDPRRRQIAH 249 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +SL R E ASGG+R+G+D+ K+I LGA+L G A+P L A Sbjct: 250 CFAGWGIPTAVSLMQVRKAVPELPVFASGGIRSGIDVAKAIALGATLVGSAAPLLDAATY 309 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S AV L + ++ F G+ + +L + HQ Sbjct: 310 QSQAVYDKFSILLETLKIATFCAGSSNLSQLKQVQ--LHHQ 348 >gi|254172954|ref|ZP_04879628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermococcus sp. AM4] gi|214033110|gb|EEB73938.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermococcus sp. AM4] Length = 372 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 194/342 (56%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG++ +P+ I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRRFDYPIFIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFSETIPERYGIEEALKAVETIEADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + P++ KE G G+S GI D+ G GGTSWS +E +R +L ++ Sbjct: 193 KAEFPYPIIAKETGAGVSKEVAVRLESIGIDAIDVGGLGGTSWSAVEYYRAKDELGRNLA 252 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +S+ R Y + IA+GG+R+G+ + K++ +GA+ G+A P LKPA+ Sbjct: 253 LKFWDWGIKTAISVAEVR-YSTDLPIIATGGMRDGITMAKALAMGATFAGVALPLLKPAV 311 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ + +E +MFL+G + V+EL +I Sbjct: 312 KGDVEGVIKILRRYIEEIRNAMFLVGARNVEELRRVPLVITG 353 >gi|166368398|ref|YP_001660671.1| isopentenyl pyrophosphate isomerase [Microcystis aeruginosa NIES-843] gi|166090771|dbj|BAG05479.1| isopentenyl-dephosphate delta-isomerase [Microcystis aeruginosa NIES-843] Length = 347 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 130/336 (38%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK +H+ + ++ + + + H LPE+ +++ FLGK L P+L Sbjct: 10 IENRKSEHLRVCIEEDVEFQQLTSDLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPIL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA A++ +AM VGSQR+ +F +R AP +L+ Sbjct: 70 ISSMTGGTE-LAHLVNTRLATVAQRYGLAMGVGSQRIALEQPELAPTFAVRSLAPDILLL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + + Sbjct: 129 ANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQICA 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G V Sbjct: 189 QLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQV 248 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGL+NG+D+ KSI LGA LGGLA PFL A++S Sbjct: 249 FADWGLPTAECITAIRSMNSTIPLIASGGLKNGLDLAKSIALGADLGGLARPFLVAAIES 308 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV ++ L E + +F G + L + AL Sbjct: 309 EAAVDELVKFLIAELEIVLFCTGNPNLSALKNSGAL 344 >gi|47605898|sp|Q8L1I4|IDI2_PARZE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|20429108|emb|CAD24419.1| isopentenyl-diphosphate delta-isomerase [Paracoccus zeaxanthinifaciens] Length = 349 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 189/338 (55%), Positives = 245/338 (72%), Gaps = 6/338 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DH+ + D IDR FD L HRALPE+ FD +D + FLG++LSFPLLISSM Sbjct: 12 RKLDHLRALDDDADIDRGDSGFDRIALTHRALPEVDFDAIDTATSFLGRELSFPLLISSM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IERINRNLA AE+ +VAMAVGSQRVMF+D +A SF+LR +AP L++N+G Sbjct: 72 TGGTGEEIERINRNLAAGAEEARVAMAVGSQRVMFTDPSARASFDLRAHAPTVPLLANIG 131 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLN G+++ A+ VL ADGL+LHLNPLQE +QP G+ +FADL SKIA ++ + V Sbjct: 132 AVQLNMGLGLKECLAAIEVLQADGLYLHLNPLQEAVQPEGDRDFADLGSKIAAIARDVPV 191 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVFQDWG 242 P+LLKEVGCGLS+ DI +GL++GIR+FD+AGRGGTSWSRIE R + D+G+VFQDWG Sbjct: 192 PVLLKEVGCGLSAADIAIGLRAGIRHFDVAGRGGTSWSRIEYRRRQRADDDLGLVFQDWG 251 Query: 243 IPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + T +L ARP + IASGG+RNGVD+ K +ILGA + G+A+P LK A +S Sbjct: 252 LQTVDALREARPALAAHDGTSVLIASGGIRNGVDMAKCVILGADMCGVAAPLLKAAQNSR 311 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +AVV+AI L EF +MFLLG + +L N++LIR Sbjct: 312 EAVVSAIRKLHLEFRTAMFLLGCGTLADLKDNSSLIRQ 349 >gi|159030050|emb|CAO90432.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 196/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK +H+ + ++ + + + H LPE+ +++ FLGK L P+L Sbjct: 10 IENRKSEHLRVCIEEDVEFQQLTNGLEKYRFTHCCLPELDRSDIELGTTFLGKSLKAPIL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + +N LA A++ + M VGSQR+ +F +R AP +L+ Sbjct: 70 ISSMTGGTE-LAHLVNTRLATVAQRYGLGMGVGSQRIALEQPELAPTFAVRSLAPDILLL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G++ + V +L AD L LHLNPLQE +Q G++NF L +KI + Sbjct: 129 ANLGAVQLNYGCGLEDCLKLVELLEADALILHLNPLQEWVQSGGDSNFKGLLAKIQQICV 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KEVG G+S++ + +++G+ D+AG GGTSW+++ES R + + +G V Sbjct: 189 QLPVPVIAKEVGNGISAVMAKQLIEAGVAAIDVAGAGGTSWAKVESQRAKDNRQRHLGQV 248 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT + R + IASGGL+NG+DI KS+ LGA LGGLA PFL A++S Sbjct: 249 FADWGLPTAECITAIRSLNSTIPLIASGGLKNGLDIAKSVALGADLGGLARPFLVAAIES 308 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV ++ L E + +F G + L + AL Sbjct: 309 EAAVDELVKFLIAELEIVLFCTGNPNLSALKHSGAL 344 >gi|269838030|ref|YP_003320258.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sphaerobacter thermophilus DSM 20745] gi|269787293|gb|ACZ39436.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sphaerobacter thermophilus DSM 20745] Length = 501 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 130/337 (38%), Positives = 190/337 (56%), Gaps = 5/337 (1%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +H+ I +D F+ + + ALPEI D+VD G++L+ PLL Sbjct: 14 TPKRKAEHLRINLDEDVSAKGVTTGFERYRFVPAALPEIDLDQVDTGTTLFGRRLAAPLL 73 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS MTGG + ERIN LA AA++ +A+ +GS RV+ + +F +R AP +L+ Sbjct: 74 ISCMTGGVPEA-ERINLTLAGAAQEIGLAVGLGSGRVLLEHPEVLPTFRVRPEAPDVLLL 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLN G + V L AD L LHLN LQE +QP G+T FA L +IA L + Sbjct: 133 ANLGAVQLNLGVGPDQCRWLVEQLEADALVLHLNALQEALQPGGDTRFAGLLDRIAALCA 192 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 ++VP+++KEVG G+ + ++G+ D+AG GGTSWS +E HR ++ + Sbjct: 193 VLEVPVIVKEVGWGIPPDTVVRLFEAGVAAVDVAGAGGTSWSEVERHRMEGEVRRRVAAA 252 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +L AR + ASGG+R+G+D K++ LGA L G+A PFL+ A Sbjct: 253 FAGWGIPTAEALRGARRVAPDRLIFASGGIRDGMDAAKAVALGADLVGMAGPFLRAADQG 312 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +AV L + ++MF +G ++EL L+ Sbjct: 313 PEAVHDLATELIETLRITMFCIGASTLEELRGTPRLV 349 >gi|212223281|ref|YP_002306517.1| isopentenyl pyrophosphate isomerase [Thermococcus onnurineus NA1] gi|226707323|sp|B6YST3|IDI2_THEON RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|212008238|gb|ACJ15620.1| isopentenyl-diphosphate delta-isomerase [Thermococcus onnurineus NA1] Length = 374 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 126/342 (36%), Positives = 195/342 (57%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P++I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVSNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIMIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ +IN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGKINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFAETMPDRYGIEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIG 235 + P++ KE G G+S GI D+ G GGTSWS +E +R +L ++ Sbjct: 193 KAEFPYPIIAKETGAGVSMEVAIRLESIGIDAIDVGGLGGTSWSGVEYYRAKDELGRNLA 252 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P L+PA+ Sbjct: 253 LKFWDWGIKTAISVAEVR-YATELPIIATGGMRDGIAMAKALAMGATFAGVALPLLRPAV 311 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ +E +E +MFL+G + V+EL +I Sbjct: 312 KGDVEGVIKVLERYIEEIRNTMFLVGARNVEELRKVPLVITG 353 >gi|57641405|ref|YP_183883.1| isopentenyl pyrophosphate isomerase [Thermococcus kodakarensis KOD1] gi|73920024|sp|Q76CZ1|IDI2_PYRKO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|42821331|dbj|BAD11790.1| isopentenyl diphosphate isomerase [Thermococcus kodakaraensis] gi|57159729|dbj|BAD85659.1| isopentenyl-diphosphate delta-isomerase [Thermococcus kodakarensis KOD1] Length = 374 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 127/342 (37%), Positives = 193/342 (56%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D H +H +LPEI DE+D SVEFLG+K +P+ I+ M Sbjct: 13 RKFEHIEHCLKRNVQAHVTNGFEDVHFVHMSLPEIDKDEIDLSVEFLGRKFDYPIFIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ RIN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGRINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDVFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +G+++A +AV + AD L +H+NPLQE +QP G+T + + +A L Sbjct: 133 LGAPQFSETIRERYGLEEALKAVETIQADALAIHMNPLQESVQPEGDTQYRGVLKALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 + P++ KE G G+S GI D+ G GGTSWS +E +R + D+ Sbjct: 193 KAEFPYPIIAKETGAGVSMEVAVRLESIGIDAIDVGGLGGTSWSGVEYYRAKDEIGKDLA 252 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +S+ R Y E IA+GG+R+G+ + K++ +GA+ G+A P LKPA+ Sbjct: 253 LRFWDWGIKTAISVAEVR-YATELPIIATGGMRDGIAMAKALAMGATFAGVALPLLKPAV 311 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ + +E +MFL+G + V+EL +I Sbjct: 312 KGDVEGVIKILRRYIEEIRNAMFLVGARNVEELRKVPLVITG 353 >gi|332159384|ref|YP_004424663.1| isopentenyl pyrophosphate isomerase [Pyrococcus sp. NA2] gi|331034847|gb|AEC52659.1| isopentenyl pyrophosphate isomerase [Pyrococcus sp. NA2] Length = 374 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 196/346 (56%), Gaps = 11/346 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +HI K F+D H +H++LPE+ DE+D +VEF G+K +P++ Sbjct: 9 ITISRKFEHIEHCLKRNVEAHVTNGFEDIHFVHKSLPEVDRDEIDLTVEFFGRKFDYPIM 68 Query: 61 ISSMTGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 I+ MTGG +++ +INR LA AAE+ + + +GSQR M +S+ +R AP Sbjct: 69 ITGMTGGTRKDEIAGKINRTLAQAAEELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVF 128 Query: 119 LISNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 LI NLGA Q + + V++ A+ + AD + +H+NPLQE +QP G+T FA + Sbjct: 129 LIGNLGAPQFGRNAKKRYSVEEVLYAIEKIEADAIAIHMNPLQESVQPEGDTTFAGVLEA 188 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLE 231 +A + + + P++ KE G G+S GI DI+G GGTSWS +E +R + + Sbjct: 189 LAEIKANISYPIIAKETGAGVSKEVAIELEAIGIDAIDISGLGGTSWSAVEYYRAKDEGK 248 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + F DWGI T +SL R + IASGG+R+G+ + K++ +GA++ G+A P L Sbjct: 249 RRLALRFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGISMAKALAMGATMVGIALPVL 307 Query: 292 KPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 KPA + VV I++ +E +MFL+G K V+EL +I Sbjct: 308 KPAARGDVEGVVRIIKNYAEEIRNAMFLVGAKNVKELRKVPLVITG 353 >gi|172036117|ref|YP_001802618.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. ATCC 51142] gi|171697571|gb|ACB50552.1| isopentenyl-diphosphate delta-isomerase, type 2 [Cyanothece sp. ATCC 51142] Length = 354 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 142/336 (42%), Positives = 196/336 (58%), Gaps = 5/336 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DHINIV + ++ F+ + + H ALP++ DEVD S++ GK L PL Sbjct: 15 LIENRKADHINIVLEKDVTGKDITTGFEQFFIEHDALPDVDLDEVDLSLQLWGKTLQAPL 74 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA AA+ +AM VGSQR N +++++RQ AP +L Sbjct: 75 LISSMTGGTD-SAHTINLNLAEAAQALGIAMGVGSQRAAIEQPNLGETYKIRQVAPDILL 133 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L +KI L+ Sbjct: 134 FANLGAVQLNYGYGIDEAKKAVEMIEADALILHLNPLQEAVQAEGDRNWKGLYNKIETLT 193 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 + +DVP++ KEVG G+S G+ DIAG GGTSWS +E++R + I Sbjct: 194 TQLDVPIIAKEVGNGISGKVARRLANCGVSAIDIAGAGGTSWSEVEAYRQHDPRRRQIAH 253 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +SL R E ASGG+R+G+D K+I LGA+L G A+P L A Sbjct: 254 CFAGWGIPTAMSLMQVRKAVPELPVFASGGIRDGIDAAKAIALGATLVGSAAPLLDAATH 313 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S AV L + ++ F G EL T Sbjct: 314 QSQAVYDKFSILLETLKIATFCAGVSNFTELQQVTL 349 >gi|84489656|ref|YP_447888.1| isopentenyl pyrophosphate isomerase [Methanosphaera stadtmanae DSM 3091] gi|84372975|gb|ABC57245.1| isopentenyl-diphosphate delta-isomerase [Methanosphaera stadtmanae DSM 3091] Length = 349 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 128/338 (37%), Positives = 194/338 (57%), Gaps = 9/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++DRK++H+ I F+D L+H +LPE++++E+D S+E GKKLS PL+ Sbjct: 1 MISDRKLEHLEICKNKDIEHHITTGFEDIQLVHTSLPEVNYEEIDTSIELFGKKLSSPLI 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 IS++TGG+ ++IN LAIA E T + M VGSQR ++ +F + R APH ++ Sbjct: 61 ISAITGGHP-SSKKINEKLAIATENTNIGMGVGSQRAGITNPELTDTFTVVRDNAPHALI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+GA Q V+ A +A+ +L D L +HLNPLQEIIQP G+ + I + Sbjct: 120 IGNIGAPQ------VEYAPKAIEMLNTDALAIHLNPLQEIIQPEGDVDAKGYVEDIKAIC 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 S ++P++ KE G G+ D ++ K G+ DI G GGTSW+ +E++R D+G +F Sbjct: 174 SNTNIPIIAKETGAGIGMEDAKILEKIGVDAIDIQGVGGTSWAAVETYRAENPDLGNLFW 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGI T +S + I+SGG+RNG++ K+I LG+ G+A PFLK A + Sbjct: 234 DWGITTAVSTVEVLE-STKIPVISSGGIRNGLEAAKAIALGSECVGMALPFLKHAYLGHN 292 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V I E +MFL+G ++EL +I + Sbjct: 293 YVEEKINQFTHELKTAMFLVGASNIEELKQKRLIITGK 330 >gi|254513308|ref|ZP_05125373.1| isopentenyl-diphosphate delta-isomerase, type 2 [Rhodobacteraceae bacterium KLH11] gi|221532312|gb|EEE35308.1| isopentenyl-diphosphate delta-isomerase, type 2 [Rhodobacteraceae bacterium KLH11] Length = 349 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 191/340 (56%), Positives = 244/340 (71%), Gaps = 6/340 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 V+ RK DH+ I+ D G++R+ FD L HRA+PE+ +D V+ +FLGK+LSFPLLI Sbjct: 10 VSSRKHDHLRIIASDSGVERHTGGFDSLRLNHRAMPELDWDSVETHAQFLGKRLSFPLLI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ + I RIN+NLA AAE T VAMAVGSQRVMF++ A SFELR++AP TVLIS Sbjct: 70 SSMTGGDGEHIYRINKNLAEAAEATGVAMAVGSQRVMFTNTQARASFELREFAPETVLIS 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQLN G+++ +AV VL ADGL+LHLNPLQE +QP G+ +F+ +++ IA L Sbjct: 130 NIGAVQLNTGIGLEECSEAVDVLDADGLYLHLNPLQEAVQPEGDRDFSGIAAAIAQLVPD 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES--DIGIVFQ 239 M VP+LLKEVG GLS+ DI LGL +GIR+FD+AGRGGTSWSRIE HR + D+G+VFQ Sbjct: 190 MRVPVLLKEVGSGLSASDIRLGLAAGIRHFDVAGRGGTSWSRIEYHRREAASDDLGLVFQ 249 Query: 240 DWGIPTPLSLEMARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 DWG+ T +L ARP A IASGG+R+G+D+ KSIILGA L GLA+PFL A Sbjct: 250 DWGLTTVEALLAARPILESSKEHATLIASGGIRSGIDMAKSIILGADLCGLAAPFLSAAQ 309 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S DAV+ I+ L +EF +MFLLG L N ++ Sbjct: 310 ISRDAVIEKIQQLHREFRTAMFLLGCSDCMALKKNGRFLK 349 >gi|14591025|ref|NP_143100.1| isopentenyl pyrophosphate isomerase [Pyrococcus horikoshii OT3] gi|13878542|sp|O58893|IDI2_PYRHO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|3257619|dbj|BAA30302.1| 371aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 371 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 129/342 (37%), Positives = 195/342 (57%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F+D + +H++LPEI DE+D +VEFLG+K +P++I+ M Sbjct: 9 RKFEHIEHCLKRNVEAHVSNGFEDVYFVHKSLPEIDKDEIDLTVEFLGRKFDYPIMITGM 68 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG ++ +INR LA+AAE+ + VGSQR M +S+ +R AP LI N Sbjct: 69 TGGTRREEIAGKINRTLAMAAEELNIPFGVGSQRAMIEKPETWESYYVRDVAPDIFLIGN 128 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + + V++ A+ + AD + +H+NPLQE +QP G+T +A + +A + Sbjct: 129 LGAPQFGKNAKKRYSVKEVLYAIEKIEADAIAIHMNPLQESVQPEGDTTYAGVLEALAEI 188 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IG 235 S+++ P++ KE G G+S GI DI+G GGTSWS +E +R +S+ I Sbjct: 189 KSSINYPVIAKETGAGVSKEVAIELESVGIDAIDISGLGGTSWSAVEYYRAKDSEKRKIA 248 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +SL R + IASGG+R+GV + K++ +GASL G+A P L+PA Sbjct: 249 LKFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGVMMAKALAMGASLVGIALPVLRPAA 307 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + VV I +E MFL+G + ++EL +I Sbjct: 308 RGDVEGVVRIIRGYAEEIKNVMFLVGARNIRELRRVPLVITG 349 >gi|14521271|ref|NP_126746.1| isopentenyl pyrophosphate isomerase [Pyrococcus abyssi GE5] gi|13878567|sp|Q9UZS9|IDI2_PYRAB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|5458489|emb|CAB49977.1| fnI isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) [Pyrococcus abyssi GE5] Length = 370 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 126/342 (36%), Positives = 193/342 (56%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI F+D HLIH++LPEI DE+D SV+FLG+K +P++I+ M Sbjct: 8 RKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 67 Query: 65 TGGNNKM--IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG K RINR LA AA++ + + +GSQR M +S+ +R AP L+ N Sbjct: 68 TGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLVGN 127 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + + V + A+ + AD + +H+NPLQE IQP G+T F+ + +A + Sbjct: 128 LGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAEI 187 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 +S +D P++ KE G G+S G+ DI+G GGTSWS +E +R + ++ Sbjct: 188 TSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNLA 247 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGI T +SL R + IASGG+R+G+ + K++ +GAS+ G+A P L+PA Sbjct: 248 LKFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRPAA 306 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ I+ +E MFL+G + ++EL +I Sbjct: 307 KGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITG 348 >gi|119509807|ref|ZP_01628951.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] gi|119465542|gb|EAW46435.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] Length = 348 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 135/336 (40%), Positives = 197/336 (58%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + + D + F+ + H LPEI+ +++ FLGK + P+L Sbjct: 11 IEARKAEHLRVCLEEDVSCQQVTSGFERYRFTHNCLPEINRSDINLQTSFLGKTVGAPVL 70 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + +N LA A++ ++AM VGSQR++ + +F +R +AP +L+ Sbjct: 71 ISSMTGGTE-LAKLVNTRLATIAQRYRLAMGVGSQRIVIEQPHLASTFAVRSFAPDILLL 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY G+ V+ L AD L LHLNPLQE +Q G+TNFA L +KIA L Sbjct: 130 ANLGAVQLNYGCGLNDCLHLVNSLQADALILHLNPLQECVQSRGDTNFAGLLAKIAQLCE 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP+++KEVG G+S+ + + +G+ D+AG GGTSW+++ES R D + +G Sbjct: 190 QLPVPIVVKEVGNGISAPMAQKLMDAGVAAIDVAGAGGTSWAKVESQRAEDDQQRRLGQT 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT L R IASGGL NG+D+ K+I LGA L GLA PFL A+ S Sbjct: 250 FGDWGLPTADCLNSIRAIAPTFPLIASGGLLNGLDVAKAIALGADLAGLARPFLAAAVQS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV + L E ++F G + +L + AL Sbjct: 310 EAAVDQLAQVLIAELETALFCTGNATLAQLRSSGAL 345 >gi|254424430|ref|ZP_05038148.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7335] gi|196191919|gb|EDX86883.1| isopentenyl-diphosphate delta-isomerase, type 2 [Synechococcus sp. PCC 7335] Length = 396 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 142/357 (39%), Positives = 199/357 (55%), Gaps = 24/357 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DH+ I + F+ + H LPE++ D++D FLGK ++ PLL Sbjct: 38 TQGRKADHLRICLDEDVQSHRITNGFEQYRFTHCCLPELNRDDIDLRSTFLGKAITTPLL 97 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + IN+ LA A++ +AM VGSQRV + I++F +RQYAP +L Sbjct: 98 ISSMTGGTEQA-QLINQRLAKTAQRFGLAMGVGSQRVAVENPALIETFSVRQYAPDALLF 156 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNYD+G+++ +AV L AD L LHLNPLQE +Q G+ NF L +KI L+ Sbjct: 157 ANLGAVQLNYDYGIKQCQKAVDALQADALILHLNPLQEAVQTEGDVNFKGLFTKIEQLAK 216 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP++ KEVG G+S++ + +G+ D+AG GGTSW+R+ES R + +G Sbjct: 217 VLPVPVVAKEVGNGISAVMARRLVDAGVAAIDVAGAGGTSWARVESERAKDAKQRRLGNT 276 Query: 238 FQDWGIPTPLSLEMARPYCNEAQ-------------------FIASGGLRNGVDILKSII 278 F DWGIPT L R IASGGLRNG+D K+I Sbjct: 277 FADWGIPTAECLTSIRSEFQTEPASDSGARISSPSTSSASVSLIASGGLRNGLDAAKAIA 336 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LGA L G+A PFL+ A S +A+ E+L E +F G++ + L + R Sbjct: 337 LGADLVGIAMPFLQAASQSEEALAELSEALIAELTTVLFCTGSESLLGLRQPGVIRR 393 >gi|22298946|ref|NP_682193.1| isopentenyl pyrophosphate isomerase [Thermosynechococcus elongatus BP-1] gi|32129627|sp|Q8DJ26|IDI2_THEEB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|22295127|dbj|BAC08955.1| isopentenyl-diphosphate delta-isomerase [Thermosynechococcus elongatus BP-1] Length = 351 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 201/338 (59%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + + D F+ + H ALPE+ F E+D VEFLG +L+ PLL Sbjct: 14 IEQRKAEHLKLCLQGDVNHQEITTGFEKYRFRHCALPELDFAEIDLRVEFLGWRLAAPLL 73 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + E INR LA A++ + M VGSQRV+ +F +R+ AP L+ Sbjct: 74 ISSMTGGTPQAGE-INRRLARVAQQKGIVMGVGSQRVLLEHPEVATTFAIRREAPTIPLL 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY GV + + V +L A+ L LHLNPLQE +Q G+ NF L +KI +L Sbjct: 133 ANLGAVQLNYGCGVSECQKIVDLLEANALILHLNPLQEAVQTGGDRNFKGLLTKIGVLCR 192 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIV 237 A+ VP+++KEVG G+S+ + + G+ D+AG GGTSW+++E+ R ++ +G Sbjct: 193 ALPVPVIVKEVGNGISAEVAKQLVDVGVAAIDVAGAGGTSWAKVEAARAQDASQRYLGDA 252 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WGIPT LE + IASGGL++G+D+ K++ LGA L GLA PFL+ A S Sbjct: 253 FAEWGIPTAHCLEQVHTALPDTPLIASGGLKDGIDVAKALALGAGLAGLARPFLQAAHQS 312 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A+ I+ L +E +F G+ Q LY L R Sbjct: 313 EEALAQRIDLLLEELKTVLFCTGSATPQALYQRRCLER 350 >gi|159901199|ref|YP_001547446.1| isopentenyl pyrophosphate isomerase [Herpetosiphon aurantiacus ATCC 23779] gi|159894238|gb|ABX07318.1| isopentenyl-diphosphate delta-isomerase, type 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 344 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 143/336 (42%), Positives = 192/336 (57%), Gaps = 6/336 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RKIDH+NIV K D F +H H ALPE+ +D S FLGK+L P L Sbjct: 6 TEGRKIDHVNIVIKEDVNAKGITTGFGRYHFEHDALPELDMRRIDLSTTFLGKQLKAPFL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG E+IN LA AA+ VAM VGSQR D + S+++R+ AP L Sbjct: 66 ISSMTGGAAP-TEKINLQLAEAAQALGVAMGVGSQRAAIFDPSVAASYQVRRVAPDIALF 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +GV++ +AV ++ AD L LH N LQE +QP G+TNFA L K+ + Sbjct: 125 ANLGAVQLNYGYGVEQCLRAVDMIQADALILHFNALQEAVQPEGDTNFAGLLQKVEAICR 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 A+ VP++ KEVG G+ + + +++G++ D+AG GGTSWS +E R I Sbjct: 185 ALPVPVIAKEVGNGIGAKTAKRLVEAGVQAIDVAGAGGTSWSEVERFRHRTQAGQRIAAT 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +++ R I SGGLR+G+D+ K+I LGA LG A+P L D Sbjct: 245 FAGWGIPTTEAIKQVRAALPNIGIIGSGGLRSGLDLAKAIALGADLGASAAPNLLAQNDG 304 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +AV AI ++ E +SMF G + EL Sbjct: 305 GSEAVYEAILAVIDELRISMFCTGAANLAELRQTPL 340 >gi|242399210|ref|YP_002994634.1| Isopentenyl-diphosphate delta-isomerase [Thermococcus sibiricus MM 739] gi|259491454|sp|C6A3U0|IDI2_THESM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|242265603|gb|ACS90285.1| Isopentenyl-diphosphate delta-isomerase [Thermococcus sibiricus MM 739] Length = 374 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 127/342 (37%), Positives = 194/342 (56%), Gaps = 11/342 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K F++ H +H +LPEI DE+D SVE LG+K +P++I+ M Sbjct: 13 RKFEHIEHCLKKQVEAHVSTQFENIHFVHTSLPEIDKDEIDLSVEVLGRKFDYPIMIAGM 72 Query: 65 TGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 TGG +++ +IN+ LA AA++ + M VGSQR M +S+ +R AP L+ N Sbjct: 73 TGGTKGSQLAGKINKTLAKAAQELNIPMGVGSQRAMIRKPETWESYYVRDVAPDIFLVGN 132 Query: 123 LGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 LGA Q + +GV++A +AV + AD L +H+NPLQE +QP G+T + + + +A L Sbjct: 133 LGAPQFAENMPNRYGVEEALKAVETIQADALAIHMNPLQESVQPEGDTQYKGVITALAEL 192 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 + P++ KE G G+S GI D+ G GGTSWS +E +R + ++ Sbjct: 193 KGELSYPIIAKETGAGVSMEVAIKLESIGIDAIDVGGLGGTSWSSVEYYRAKDEKSKNLA 252 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 + F DWGIPT LS+ R Y IA+GG+R+G+ I K++ LGA+L G+A P LKPA+ Sbjct: 253 LKFWDWGIPTALSVAEVR-YATGLPIIATGGIRDGIMIAKALALGANLAGVALPLLKPAV 311 Query: 296 DSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ ++ E MFL+G V+EL ++ Sbjct: 312 NGDVEGVIKILQQYIDELRNVMFLVGAGSVKELKKVPIVVTG 353 >gi|56752170|ref|YP_172871.1| isopentenyl pyrophosphate isomerase [Synechococcus elongatus PCC 6301] gi|81300742|ref|YP_400950.1| isopentenyl pyrophosphate isomerase [Synechococcus elongatus PCC 7942] gi|81561464|sp|Q5N019|IDI2_SYNP6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|56687129|dbj|BAD80351.1| isopentenyl-dephosphate delta-isomerase [Synechococcus elongatus PCC 6301] gi|81169623|gb|ABB57963.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Synechococcus elongatus PCC 7942] Length = 348 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 143/334 (42%), Positives = 189/334 (56%), Gaps = 5/334 (1%) Query: 4 DRKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + + + + H ALP +S +D +FLG+ L PLLIS Sbjct: 13 QRKAEHLQLCLEAGVESPEVTTGLERYRFQHCALPNLSLQALDLGTQFLGRSLGAPLLIS 72 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 SMTGG +RIN LAIAA+K ++AM VGSQRVM +F++R AP +L++N Sbjct: 73 SMTGGTE-TAQRINCRLAIAAQKYRLAMGVGSQRVMLRQPETTPTFDVRDLAPDILLLAN 131 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGAVQLNY +A Q V LGAD L LHLNPLQE IQ G+T+F L +I L +A+ Sbjct: 132 LGAVQLNYGVTPAEAQQLVDRLGADALILHLNPLQECIQAEGDTDFRGLLGRIGELCAAL 191 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVFQ 239 VP+++KEVG GLS+M L +G+ D+AG GGTSWSR+E R ++ +G F Sbjct: 192 SVPVIVKEVGNGLSAMVAAQLLSAGVAALDVAGAGGTSWSRVEGQRAVDPLLRRLGDRFG 251 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT SL+ R IASGG+R+G+D K+I LGA L GLA PFL A S + Sbjct: 252 DWGIPTAESLQQVRQVSATVPLIASGGIRHGLDAAKAIALGADLVGLARPFLVAADQSEE 311 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I L E + F + L L Sbjct: 312 VLDQWITELLAELRIVRFCTDSGDWAALRRPGVL 345 >gi|149183685|ref|ZP_01862098.1| isopentenyl pyrophosphate isomerase [Bacillus sp. SG-1] gi|148848612|gb|EDL62849.1| isopentenyl pyrophosphate isomerase [Bacillus sp. SG-1] Length = 345 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 126/338 (37%), Positives = 188/338 (55%), Gaps = 6/338 (1%) Query: 1 MVNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +HI+I KD F+ + H ALPEI F E+D S K+L P Sbjct: 6 ITEKRKTEHIDICLSKDVEPVEMTTGFESFRFQHNALPEIDFQEIDLSTRLFDKQLKVPF 65 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG +IN LA AEK AM VGS R ++++R++AP + Sbjct: 66 LISSMTGGTE-TAAKINETLAKTAEKRGWAMGVGSMRTAIEKEQTAYTYDVRKHAPTIPI 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GAVQ NY +GV++ +AV ++ AD + LHLN +QE+ QP G+TNF DL KI ++ Sbjct: 125 LANIGAVQFNYGYGVEQCQRAVDLIKADAIILHLNSMQEVFQPEGDTNFKDLLPKIEKVA 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 ++ VP+ +KEVG G+SS ++G+ + D+AG GGTSW ++E++R + + Sbjct: 185 RSLPVPVGVKEVGMGISSATARRLYEAGVSFIDVAGAGGTSWIQVEAYRSKDPLRAKAAE 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAM 295 F+ WGIPT SL R E ASGG++NGV K+I LGA + G L A+ Sbjct: 245 AFRGWGIPTAESLLQIRRDVPEVPLFASGGMKNGVHAAKAIALGADIAGFGRSLLPSAAV 304 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +A+ + + E +MF +G +++L +L Sbjct: 305 SDGEALDGQFQQIEFELRAAMFGIGVYSIEQLKGTDSL 342 >gi|52549225|gb|AAU83074.1| L-lactate dehydrogenase [uncultured archaeon GZfos26E7] Length = 375 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 135/345 (39%), Positives = 190/345 (55%), Gaps = 12/345 (3%) Query: 1 MVND-RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M RKI+H+ I DP FDD HLIH ALPEI DE+D S E GK ++ PL Sbjct: 25 MTTSLRKIEHLQICANDPVEAHVSAGFDDVHLIHCALPEIDKDEIDTSTELFGKVMAAPL 84 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 LI+SMTGG+ IN LA+AAE + + VGSQR + +F + R APH Sbjct: 85 LIASMTGGHPDTY-PINEALALAAEHLGIGIGVGSQRAALENPEQEGTFRVVRDCAPHAF 143 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G VQL ++G+ A+ ++ AD + +HLN LQE IQP G T+ I + Sbjct: 144 VYANIGVVQLT-EYGIDGVEHAIEMIEADAIAIHLNFLQEAIQPEGCTHARGSLDAIKDV 202 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------ 232 A+ VP++ KE G G+S + +G+ D+ G GGTSW+ +E +R L+ Sbjct: 203 CDAVSVPVIAKETGAGISREVAAMLAAAGVDAIDVGGAGGTSWAGVEYYRALDRGDLISE 262 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G +F DWGIPT S+ IA+GG+R G+DI KSI LGASL G A P + Sbjct: 263 HLGGLFWDWGIPTAASVVEC--ASCGLPVIATGGVRTGIDIAKSIALGASLSGTALPLVA 320 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PAM ++DAV+ + + E ++MFL G V +L +I + Sbjct: 321 PAMKNADAVIDRLSCMISELEIAMFLCGCPDVADLKTAPVVIGGR 365 >gi|67459177|ref|YP_246801.1| isopentenyl pyrophosphate isomerase [Rickettsia felis URRWXCal2] gi|75536391|sp|Q4ULD7|IDI2_RICFE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|67004710|gb|AAY61636.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia felis URRWXCal2] Length = 345 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 136/330 (41%), Positives = 199/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I F+ IH ALPEI++D +D + FLGK L P+LISS Sbjct: 13 ERKQDHIEINLMKNVASTLTSGFESMQFIHNALPEINYDSIDTTSTFLGKSLQAPILISS 72 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K +AM +GS RV+ + + I +F +R AP L++N+ Sbjct: 73 MTGGTTRAGD-INYRLAQAAQKAGIAMGLGSMRVLLTKPDTITTFAVRDVAPDIPLLANI 131 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V V+ AD L LHLN LQE+ QP GN N+ +L KI L + + Sbjct: 132 GAVQLNYFVTPKECQYLVDVVKADALILHLNVLQELTQPEGNRNWENLLPKIKELVNYLS 191 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS E + G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 192 VPVIVKEVGYGLSKKVAESLIGVGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 251 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + IASGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 252 WGIPTLDSLKMVREVSGDIPIIASGGLKSGIDGAKAIRMGANIFGLAGQFLKAADTSESL 311 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + ++ + ++ ++M G++ +++L Sbjct: 312 LSEEVQLIIEQLKITMLCTGSRTLKDLAKA 341 >gi|156742187|ref|YP_001432316.1| isopentenyl pyrophosphate isomerase [Roseiflexus castenholzii DSM 13941] gi|156233515|gb|ABU58298.1| isopentenyl-diphosphate delta-isomerase, type 2 [Roseiflexus castenholzii DSM 13941] Length = 345 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 134/334 (40%), Positives = 193/334 (57%), Gaps = 7/334 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+DH+ IV +D F + + H A PE+ E+D + FLGK++ PLL Sbjct: 7 TSSRKLDHVRIVLGEDVAAKGVTTGFAAYRMPHEAAPELDLAEIDTGLTFLGKRMRAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + RIN LA AAE +AM VGSQR D +++ +R AP L+ Sbjct: 67 ISSMTGGARDVA-RINLALAEAAETLGLAMGVGSQRAALVDPRVAETYRVRHVAPTIPLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FGV + +AV ++ AD L LH N LQE +QP GNTNF L +I + + Sbjct: 126 ANLGAVQLNYGFGVDECRRAVEMIEADALVLHFNALQEAVQPEGNTNFKGLLRRIEEVCT 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 +DVP+++KEVG G+ + + +G++ D+AG GGTSWS +E R + + + Sbjct: 186 RLDVPVIVKEVGNGIGAATARRLVDAGVKVIDVAGAGGTSWSEVERFRHKTERGAQVAAA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F WGIPT ++ R + I SGG+R+GVD+ K+I LGA L A P L PA+D Sbjct: 246 FAGWGIPTTEAIRQVRAALPDITIIGSGGVRSGVDVAKAIALGADLAATAKPALIPAVDE 305 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++AV+ +++ E ++MF G + L Sbjct: 306 RGAEAVIESLQVYIDELRIAMFCTGCGDLAALRR 339 >gi|157828615|ref|YP_001494857.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933329|ref|YP_001650118.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. Iowa] gi|166226208|sp|A8GSH4|IDI2_RICRS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044242|sp|B0BXY6|IDI2_RICRO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157801096|gb|ABV76349.1| isopentenyl pyrophosphate isomerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908416|gb|ABY72712.1| isopentenyl-diphosphate delta-isomerase [Rickettsia rickettsii str. Iowa] Length = 342 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 133/330 (40%), Positives = 199/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPE+++D ++ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTQNVESTLKSGFESIHFIHNALPELNYDSINTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVHYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + I+ + ++ ++M G++ +++L Sbjct: 309 LFEEIQLIIEQLKITMLCTGSRTLKDLAKA 338 >gi|229586801|ref|YP_002845302.1| isopentenyl pyrophosphate isomerase [Rickettsia africae ESF-5] gi|259491446|sp|C3PNP9|IDI2_RICAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|228021851|gb|ACP53559.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia africae ESF-5] Length = 342 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 135/330 (40%), Positives = 200/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDLAKA 338 >gi|34581619|ref|ZP_00143099.1| hypothetical carotenoid biosynthesis protein [Rickettsia sibirica 246] gi|28263004|gb|EAA26508.1| hypothetical carotenoid biosynthesis protein [Rickettsia sibirica 246] Length = 342 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 135/327 (41%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G+ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVEVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDL 335 >gi|15892667|ref|NP_360381.1| isopentenyl pyrophosphate isomerase [Rickettsia conorii str. Malish 7] gi|20138651|sp|Q92HM7|IDI2_RICCN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15619839|gb|AAL03282.1| carotenoid biosynthesis protein-like protein [Rickettsia conorii str. Malish 7] Length = 342 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 134/330 (40%), Positives = 199/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGG ++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGFKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + I+ + ++ ++M G++ +++L Sbjct: 309 LSEEIQLIIEQLKITMLCTGSRTLKDLAKA 338 >gi|238650583|ref|YP_002916435.1| isopentenyl pyrophosphate isomerase [Rickettsia peacockii str. Rustic] gi|259491447|sp|C4K1D6|IDI2_RICPU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|238624681|gb|ACR47387.1| isopentenyl pyrophosphate isomerase [Rickettsia peacockii str. Rustic] Length = 342 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 135/330 (40%), Positives = 200/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K F+ H IH ALPEI++D V+ + FLGK L P+LISS Sbjct: 10 ERKQDHIEINLTKNVESTLKSGFESIHFIHNALPEINYDSVNTTTTFLGKSLQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTIKTFAVRHIAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + Sbjct: 129 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVHYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E +++G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 IPVIVKEVGYGLSKKVAESLIEAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 249 WGIPTLDSLKMVREVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + I+ + ++ ++M G++ +++L Sbjct: 309 LFEEIQLIIEQLKITMLCTGSRTLKDLAKA 338 >gi|325958577|ref|YP_004290043.1| isopentenyl-diphosphate delta-isomerase [Methanobacterium sp. AL-21] gi|325330009|gb|ADZ09071.1| Isopentenyl-diphosphate delta-isomerase [Methanobacterium sp. AL-21] Length = 351 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 189/338 (55%), Gaps = 9/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++DRK++H+ + R K D LIH+ALPE++ E+D S++ LGKKL P + Sbjct: 1 MISDRKLEHLLLCKNCDVEYRKKTGLGDVELIHKALPEVNMKEIDLSIDLLGKKLDSPFI 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 IS++TGG+ INR LA A+ + M VGSQR ++ + R+ AP L Sbjct: 61 ISAITGGHPSAT-VINRTLARTAKILNIGMGVGSQRAAIKHPELTSTYTVVREEAPDAFL 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+G Q ++ A +++ ++ AD L +HLNPLQE IQP G+ + I ++ Sbjct: 120 IGNIGCQQ------IELAQKSIEMIDADALAVHLNPLQEAIQPEGDVDARGHIESITEMT 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 S ++ P++ KE G G+ + D K+G+ D+AG GGTSW+ +E++R + +G F Sbjct: 174 STLETPIIAKETGAGIKAEDAITLEKAGVSAIDVAGSGGTSWAAVETYRAQDRTMGDAFW 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT S + I+SGG+R+G+D K+I LGA G+A P LK A + Sbjct: 234 DWGIPTAASTVEVCQ-SVKIPVISSGGIRSGLDAAKAIALGADAVGIALPLLKDAYSGHE 292 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VV I +E V+MFL+G + EL + +I+ + Sbjct: 293 EVVNRINKFNEELRVAMFLVGASNIAELKKSDLIIKGE 330 >gi|157964627|ref|YP_001499451.1| isopentenyl pyrophosphate isomerase [Rickettsia massiliae MTU5] gi|157844403|gb|ABV84904.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia massiliae MTU5] Length = 346 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 132/330 (40%), Positives = 200/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI+I + K F+ IH ALPEI++D ++ + FLGK L P+LISS Sbjct: 14 ERKRDHIDINLTKNVESKLKSGFESIQFIHNALPEINYDSINTTTTFLGKSLQAPILISS 73 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA A+K +AM +GS RV+ ++ + I +F +R AP L++N+ Sbjct: 74 MTGGTTRARD-INYRLAQVAQKAGIAMGLGSMRVLLTEPDTITTFAVRHIAPDIPLLANI 132 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP GN N+ L KI + + + Sbjct: 133 GAVQLNYGVTPKECQYLVDAIKADALILHLNVLQELTQPEGNRNWEKLLPKIREVVNYLS 192 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 +P+++KEVG GLS E + +G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 193 IPVIVKEVGYGLSKKVAESLIDAGVKVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFIN 252 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + I SGGL++G+D K+I +GA++ GLA FLK A S Sbjct: 253 WGIPTLDSLKMVRAVSKDIPIITSGGLKSGIDGAKAIRIGANIFGLAGQFLKAADTSESL 312 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + I+ + ++ ++M G++ +++L Sbjct: 313 LSEEIQLIIEQLKITMLCTGSRTLKDLAKA 342 >gi|301062391|ref|ZP_07203052.1| isopentenyl-diphosphate delta-isomerase, type 2 [delta proteobacterium NaphS2] gi|300443504|gb|EFK07608.1| isopentenyl-diphosphate delta-isomerase, type 2 [delta proteobacterium NaphS2] Length = 352 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 133/330 (40%), Positives = 194/330 (58%), Gaps = 3/330 (0%) Query: 6 KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 K +HI I ++ N F+++ I+ LPEI F++VD S FLGK +S P +IS MT Sbjct: 19 KKEHIRICLEENVESLNTTGFENYCFINNPLPEIDFEDVDTSCSFLGKSISAPFIISPMT 78 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 GG + + +IN NLA+AA + V M+VGSQR+ D + I SF++R AP L++NLGA Sbjct: 79 GGCD-LSGKINHNLAMAARELGVVMSVGSQRLGLEDPSLISSFQVRDVAPDIPLLANLGA 137 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 V LNY +G+++ + V ++GAD L L+LNP+Q++ Q GN F L+ KI + + VP Sbjct: 138 VYLNYGYGLEECERVVDMIGADALMLYLNPMQKVFQGGGNIKFRGLAEKIGYICKHLSVP 197 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVFQDWGI 243 +++KEVG GLS L K+G+ D+AG GGTSW +I + D + F WG+ Sbjct: 198 VIVKEVGFGLSDSAAMLLKKAGVSMLDVAGSGGTSWVKITRYLKGDFSAAANAHFDGWGV 257 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 PT +L + IASGG+RNGV + K++ LGAS G+A P L PAM+S +AV Sbjct: 258 PTADALISLCEVVKDIPIIASGGIRNGVHMAKAMALGASYVGMALPLLAPAMESGEAVTK 317 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ + E V+MF G L + Sbjct: 318 KVKGMINELKVAMFSCGAIDTTRLREGQCI 347 >gi|293364810|ref|ZP_06611527.1| isopentenyl-diphosphate delta-isomerase [Streptococcus oralis ATCC 35037] gi|307703059|ref|ZP_07640006.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus oralis ATCC 35037] gi|291316260|gb|EFE56696.1| isopentenyl-diphosphate delta-isomerase [Streptococcus oralis ATCC 35037] gi|307623452|gb|EFO02442.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus oralis ATCC 35037] Length = 333 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS D SF ++ P +L Sbjct: 58 INAMTGGS-KKGKEINQKLAQVAEACGILFVTGSYSAALKDP-TDDSFSVKSSHPKLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVQEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + M L + +L ++ + Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADLQNVDYILYGK 325 >gi|306828926|ref|ZP_07462118.1| isopentenyl-diphosphate delta-isomerase [Streptococcus mitis ATCC 6249] gi|304429104|gb|EFM32192.1| isopentenyl-diphosphate delta-isomerase [Streptococcus mitis ATCC 6249] Length = 333 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 175/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQKN---SYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTILELVETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V++ I+ +++ + M L + +L ++ + Sbjct: 288 EVISIIQGWKEDLRLIMCALNCTAIADLQKVDYILYGK 325 >gi|258544190|ref|ZP_05704424.1| type 2 isopentenyl-diphosphate delta-isomerase [Cardiobacterium hominis ATCC 15826] gi|258520566|gb|EEV89425.1| type 2 isopentenyl-diphosphate delta-isomerase [Cardiobacterium hominis ATCC 15826] Length = 340 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 180/335 (53%), Positives = 234/335 (69%), Gaps = 2/335 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H++ + +DP I+R F L HRALPE++ DEVD EFLGK L PLLI Sbjct: 4 TARRKREHLDAIAQDPAIERGDSGFAAIRLTHRALPELALDEVDTRCEFLGKTLRLPLLI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG++ I RIN NLA AAE VA+AVGSQRV F+ A SF LR AP+TVL++ Sbjct: 64 SSMTGGDDPEIRRINHNLAQAAEHCGVALAVGSQRVQFTTPAAAASFRLRDAAPNTVLLA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQLNY F + +AV L ADGL+LHLNPLQE +QP G+TNFA L++KIA + A Sbjct: 124 NLGAVQLNYGFTAEHCQRAVETLAADGLYLHLNPLQEAVQPEGDTNFAGLATKIAAVVRA 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--IGIVFQ 239 + VP+LLKEVG GLS DI LG +G+RYFD+AGRGGTSWSRIE HR + +G+ +Q Sbjct: 184 LPVPVLLKEVGSGLSPADITLGKGAGVRYFDLAGRGGTSWSRIEHHRRRDPADTLGLTYQ 243 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWG+ T +L + R + IASGG+RNG+D+ K+++LGA L G+A+PFL A DS+ Sbjct: 244 DWGLTTAEALRLNRAAHPDITLIASGGIRNGIDMAKAVLLGAELCGIAAPFLAAAQDSAA 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 AV+AAI+ L +E+ +++LLG + L N AL+ Sbjct: 304 AVIAAIKRLEREYRTALYLLGCRDNTALRDNHALL 338 >gi|322374887|ref|ZP_08049401.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C300] gi|321280387|gb|EFX57426.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C300] Length = 333 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS V D SF ++ P+ +L Sbjct: 58 INAMTGGSEK-GKEINQKLAQVAEACGILFVTGSYSVALKDP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIILKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + M L + +L ++ + Sbjct: 288 EVIGIVQGWKEDLCLIMCALNCATIADLQNVDYILYGK 325 >gi|307352922|ref|YP_003893973.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoplanus petrolearius DSM 11571] gi|307156155|gb|ADN35535.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoplanus petrolearius DSM 11571] Length = 350 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 138/340 (40%), Positives = 196/340 (57%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++H+ I C I+ + F+D L+H +LPE S D +DP V FLG KL+ PL I Sbjct: 11 TSSRKLEHLKICC-GGDIEAGRSGFEDIRLVHNSLPECSMDGIDPGVRFLGHKLASPLFI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 S+MTGG+ E +NR L AAE+ + M VGSQR + SF +R+ AP L Sbjct: 70 SAMTGGHPDTTE-VNRRLGEAAERFNIGMGVGSQRAALENPELEGSFTAVREAAPMAFLC 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGAVQL + G + A +AV ++ A L +HLNPLQE +QP G+ + + IA L + Sbjct: 129 GNLGAVQLR-EKGSEWADRAVEMIDAQALCIHLNPLQEAVQPEGDHDSSGCLDAIAELCA 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + P+++KE G G+S+ E G D G GGTSW+ +E+ R + +G Sbjct: 188 SSKYPVIVKETGAGISAEAAEKLWSVGAAAIDTGGLGGTSWAAVEALRGEDESLRQLGRD 247 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT +SL IASGGLR+G+DI K++ LGASLGG+A P LKPAM+S Sbjct: 248 FSDWGIPTVVSLIEV--CGKGKPVIASGGLRSGIDIAKAVTLGASLGGMALPLLKPAMES 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S+A+ I + +E ++M+L G++ L I + Sbjct: 306 SEALFEKIRQIHEEIRIAMYLTGSESCGALAGKRVYITGR 345 >gi|229542957|ref|ZP_04432017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus coagulans 36D1] gi|229327377|gb|EEN93052.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus coagulans 36D1] Length = 343 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 136/336 (40%), Positives = 188/336 (55%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDR-NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK +HI +V ++ + F+ + H+ALPE+ F+E+ FLGK L P L Sbjct: 6 ISKRKAEHIRVVLEENVAGKDTTTGFEKYRFEHQALPELDFEEISTETTFLGKPLKAPFL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + INRNLA AAEK A A+GS R +F++R APH ++ Sbjct: 66 ISSMTGGTAQA-RTINRNLAQAAEKRGWAFALGSTRAALESPEQAYTFQVRDVAPHIPVL 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G+ + + V + GAD L LH N LQE+ Q GNTNF DL KI L S Sbjct: 125 ANLGAVQLNYGYGIDECRRIVELTGADALILHFNSLQEVFQKGGNTNFKDLLVKIEDLCS 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 ++VP+ KEVG G++ E G+ + D+AG GGTSWS++E + L+ Sbjct: 185 RLEVPVGCKEVGWGINGRLAEKLYSVGVSFVDVAGSGGTSWSQVEKYLTSDPLKKAAAEA 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WG PT + AR + +ASGGL+NGVD K+I LGA L G L A+ S Sbjct: 245 FSGWGNPTAECITQARNLGLQGTLVASGGLKNGVDAAKAIALGADLAGFGRKLLHDAVHS 304 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DA+++ E E ++MF +G K + L L Sbjct: 305 VDALLSTYEQTELELKIAMFGIGAKDLSALKQTPLL 340 >gi|148643501|ref|YP_001274014.1| isopentenyl pyrophosphate isomerase [Methanobrevibacter smithii ATCC 35061] gi|148552518|gb|ABQ87646.1| isopentenyl-diphosphate delta-isomerase [Methanobrevibacter smithii ATCC 35061] Length = 348 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 196/339 (57%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I D K F+D LIH+ALPEI +E+D S GKKL PL Sbjct: 1 MISDRKLEHLLICKNYDVEFKNKKTGFEDVELIHKALPEIDKNEIDLSTSVFGKKLDSPL 60 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 I+++TGG+ + IN+ LAIAAE +A+ VGSQR ++ + R+ AP + Sbjct: 61 FITAITGGHP-AAKAINKQLAIAAESKNIALGVGSQRAAIEHPELADTYTVVRKNAPDCL 119 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L+ N+GA QL A +AV +L AD L +HLNPLQE IQP G+ + I + Sbjct: 120 LVGNIGAPQL------DLADKAVEILDADILAIHLNPLQESIQPEGDLDARGYLDSINQI 173 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + +D+P++ KE GCG+S+ + + +G+ Y DI G GGTSW+ +E++R + +G F Sbjct: 174 TKRVDIPVMAKETGCGISAEMAKQLVDAGVSYIDIEGAGGTSWAAVETYRAEDRYLGETF 233 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +S + +SGG+R+G++ K+I LGA G+A PFLK ++ S Sbjct: 234 WDWGIPTAISTVEVADAVDVPVV-SSGGIRSGLEAAKAIALGADSVGMALPFLKHSV-SE 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + I+ ++MFL+G ++EL + +I + Sbjct: 292 EQLTTFIDRFNDSLRIAMFLVGANNIEELKNSNLVISGK 330 >gi|331266990|ref|YP_004326620.1| Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus oralis Uo5] gi|326683662|emb|CBZ01280.1| Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus oralis Uo5] Length = 333 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSEKGRE-INQKLAQVAEACGILFVTGSYSAALKDP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + Q V + L +H+N +QE++ P G F + S +A S Sbjct: 116 TNIG-----LDKPFELGLQTVQEMNPLLLQVHVNVMQELLMPEGERKFRNWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIVLKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L ++ + Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADLQNVDYILYGK 325 >gi|157825899|ref|YP_001493619.1| isopentenyl pyrophosphate isomerase [Rickettsia akari str. Hartford] gi|166226205|sp|A8GNY6|IDI2_RICAH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157799857|gb|ABV75111.1| isopentenyl pyrophosphate isomerase [Rickettsia akari str. Hartford] Length = 342 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 139/329 (42%), Positives = 196/329 (59%), Gaps = 4/329 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI I K F+ IH ALPEI++D +D S FLGK L P+LISSM Sbjct: 11 RKQDHIEINLTKNVESTLKSGFESIQFIHNALPEINYDIIDTSTTFLGKYLQAPILISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + + IN LA A+K +AM +GS RV+ + + I +F +R AP L++N+G Sbjct: 71 TGGTARARD-INYRLAQVAQKAGIAMGLGSMRVLLTKPDTITTFAIRHIAPDIPLLANIG 129 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 AVQLNY ++ V V+ AD L LHLN LQE+ QP GN N+ +L +I L + + V Sbjct: 130 AVQLNYGVTPKECQYLVDVVKADALILHLNVLQELTQPEGNRNWENLLPRIQELVNYLSV 189 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDW 241 P+++KEVG GLS E +K G+ DIAG GGTSWS++E++R L++ I F W Sbjct: 190 PVVVKEVGYGLSKKVAESLIKVGVEVLDIAGSGGTSWSQVEAYRATNSLQNRIASSFISW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT SL+M R IASGGL++G+D K+I +GAS+ GLA LK A S + V Sbjct: 250 GIPTLDSLKMVREVSGNIAIIASGGLKSGIDGAKAIRMGASIFGLAGQLLKAADISENLV 309 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLN 330 I+ + ++ ++M G++ +++L Sbjct: 310 SEEIQLIIEQLKITMICTGSRTLKDLAKA 338 >gi|222445001|ref|ZP_03607516.1| hypothetical protein METSMIALI_00617 [Methanobrevibacter smithii DSM 2375] gi|261350429|ref|ZP_05975846.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanobrevibacter smithii DSM 2374] gi|222434566|gb|EEE41731.1| hypothetical protein METSMIALI_00617 [Methanobrevibacter smithii DSM 2375] gi|288861212|gb|EFC93510.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanobrevibacter smithii DSM 2374] Length = 348 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 195/339 (57%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I D K F+D LIH+ALPEI +E+D S GKKL PL Sbjct: 1 MISDRKLEHLLICKNYDVEFKNKKTGFEDVELIHKALPEIDKNEIDLSTSVFGKKLDSPL 60 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 I+++TGG+ + IN+ LAIAAE +A+ VGSQR ++ + R+ AP + Sbjct: 61 FITAITGGHP-AAKAINKQLAIAAESKNIALGVGSQRAAIEHPELADTYTVVRKNAPDCL 119 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L+ N+GA QL A +AV +L AD L +HLNPLQE IQP G+ + I + Sbjct: 120 LVGNIGAPQL------DLADKAVEILDADILAIHLNPLQESIQPEGDLDARGYLDSINQI 173 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + +D+P++ KE GCG+S+ + + G+ Y DI G GGTSW+ +E++R + +G F Sbjct: 174 TKRVDIPVMAKETGCGISAEMAKQLVDVGVSYIDIEGAGGTSWAAVETYRAEDRYLGETF 233 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +S + +SGG+R+G++ K+I LGA G+A PFLK ++ S Sbjct: 234 WDWGIPTAISTVEVADAVDVPVV-SSGGIRSGLEAAKAIALGADSVGMALPFLKHSV-SE 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + I+ ++MFL+G ++EL + +I + Sbjct: 292 EQLTTFIDRFNDSLRIAMFLVGANNIEELKNSNLVISGK 330 >gi|310644403|ref|YP_003949162.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus polymyxa SC2] gi|309249354|gb|ADO58921.1| Isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus polymyxa SC2] Length = 366 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 128/338 (37%), Positives = 180/338 (53%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RKI+H+ + ++ + + H ALPE+ FDEV +F+G+ + PLL Sbjct: 26 TGERKIEHVRLCLQEDVAGHGITSGLERYSFKHCALPELHFDEVRLDTKFMGRTVRTPLL 85 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ + IN LA AE+ A+ VGS R +F +R+ AP ++ Sbjct: 86 ISSMTGGSAE-TGAINERLAETAERRGWALGVGSVRAAVEKEELASTFAVRRLAPSIPIL 144 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FGV +AV + GAD L LHLN LQEI QP GN +F+ L +I L Sbjct: 145 ANLGAVQLNYGFGVDDCQRAVEIAGADMLVLHLNGLQEIFQPEGNLDFSGLLERIEELCH 204 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP+ +KEVG G+ +G + D+AG GGTSWS++E R+ + Sbjct: 205 RLSVPVGVKEVGWGIDGETASRLYDAGAAFIDVAGAGGTSWSQVEKFRNPDPVRRAAAEA 264 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG T + R I SGGL+NGVD K++ LGA + G L A+ S Sbjct: 265 FADWGNSTADCIVEVRAAQPNGTLIGSGGLKNGVDAAKALALGADMAGFGRSLLGSAVTS 324 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S+A+ A +E + E MF +G ++ L T L R Sbjct: 325 SEALEARLEQVELELRTVMFGIGVAEIEGLKDTTRLRR 362 >gi|126179757|ref|YP_001047722.1| isopentenyl pyrophosphate isomerase [Methanoculleus marisnigri JR1] gi|125862551|gb|ABN57740.1| isopentenyl-diphosphate delta-isomerase [Methanoculleus marisnigri JR1] Length = 350 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 134/339 (39%), Positives = 193/339 (56%), Gaps = 9/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH+ I C+ P ++ F D L+H ALPE D ++ FL + L PL I Sbjct: 7 TSSRKRDHLQICCEQP-VEAGNAGFGDVRLVHNALPECDMDAIETKTRFLDRALGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ +E +NR LA AAE+ + M VGSQR SF + R+ APH L Sbjct: 66 AAMTGGHPDTLE-VNRRLARAAERYNLGMGVGSQRAALEKPELEGSFTVVREEAPHAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG +QL D G++ A +AV ++ A + +H+N LQE IQP G+ N + L Sbjct: 125 ANLGIIQLR-DHGIEWAERAVEMIDAQAIAIHVNSLQEAIQPEGDHNAEGCIEALRDLCK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 P+++KE G G+S+ + +G DI G GGTSW++IE R +D+G Sbjct: 184 EFSYPVIVKETGSGISAGTARVIRGAGASAIDIGGYGGTSWAKIERLRASGSELADLGEA 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +SL R IA+GGLR+G+DI K++ LGA LGG+A P LKPAM+S Sbjct: 244 FLSWGIPTVVSLREVRTA--GGPIIATGGLRSGIDIAKAVALGADLGGMALPLLKPAMES 301 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 DA+ A+E++ +E V+MFL G++ + +L I Sbjct: 302 DDALSLAVEAMHRELRVAMFLTGSRSIADLRHARTYITG 340 >gi|328958134|ref|YP_004375520.1| isopentenyl diphosphate isomerase [Carnobacterium sp. 17-4] gi|328674458|gb|AEB30504.1| isopentenyl diphosphate isomerase [Carnobacterium sp. 17-4] Length = 356 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 195/338 (57%), Gaps = 10/338 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 N+RK +H+++ K + K FD + +H + PE+S + S F G +++ P I Sbjct: 4 TNNRKNEHVSLAEKFAK-ETRKSDFDSFRFVHHSFPEMSVADASISTSFAGLEMTSPFYI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 ++MTGG+ +++N LA+ A +T +AMA GS D + S+ +R+ P+ ++ Sbjct: 63 NAMTGGST-WTKKVNEKLALIARETGIAMATGSISAALKDPSVEDSYTIVREVNPNGMVF 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG Q ++ A +AV ++ A+ L +H+N QEI+ P G+ +F++ +++ + Sbjct: 122 ANLGTGQ-----TLENAKKAVDLIQANALQIHVNSPQEIVMPEGDRDFSNWLTELENIVH 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KEVG G+S I+ G++ DI+G+GGT++++IE++R +D Sbjct: 177 HLAVPVIVKEVGFGMSRETIQQLTSIGVKTIDISGQGGTNFAQIENYRRTTEKFD-YLED 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG T +SL A+P+ NE + +ASGG+RN +DI+K++ LGA G++ FL A+ D + Sbjct: 236 WGQSTVISLVEAQPFINEIELLASGGIRNPLDIVKALSLGAKGVGISGLFLHMALRDGVE 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + + + + + M LLG K +++L ++ + Sbjct: 296 ATILEVNTWKNQIASIMTLLGKKSIKDLSQADIILLGE 333 >gi|307710531|ref|ZP_07646967.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK564] gi|307618684|gb|EFN97824.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK564] Length = 336 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN+ LA A+ + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSGKGRE-INQKLAQVADACGILFVTGSYSAALKDPTDA-SFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ + V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLRTVEEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDVKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++A+ + SGG+RN +D++K ++ GA GL+ L+ + S + Sbjct: 228 WGQSTMQALINAQDWKDKAELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVEIYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIDTVQGWKDDLRLIMCALNCATIADLQKVDYLLYGK 325 >gi|13878540|sp|O27997|IDI2_ARCFU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 345 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 128/340 (37%), Positives = 200/340 (58%), Gaps = 10/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKIDH+ I ++ ++ +D LIH+ALPE+ + ++D +EF GKKLSFPLLI Sbjct: 3 TSKRKIDHLKICLEEE-VESGYTGLEDVMLIHKALPEVDYWKIDTEIEFFGKKLSFPLLI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ + + IN L A E+ + M VGSQR D + SF + R+ AP+ + Sbjct: 62 ASMTGGHPE-TKEINARLGEAVEEAGIGMGVGSQRAAIEDESLADSFTVVREKAPNAFVY 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G Q+ + GV+ +AV ++ AD + +HLN LQE IQP G+ N + + Sbjct: 121 ANIGMPQV-IERGVEIVDRAVEMIDADAVAIHLNYLQEAIQPEGDLNAEKGLEVLEEVCR 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 ++ VP++ KE G G+S + ++G+ D+ G+GGT++S +E +R ++ +GI Sbjct: 180 SVKVPVIAKETGAGISREVAVMLKRAGVSAIDVGGKGGTTFSGVEVYRVNDEVSKSVGID 239 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT S+ R IA+GGLR+G+D+ KSI +GA LG A PFL+ A++S Sbjct: 240 FWDWGLPTAFSIVDCRGI---LPVIATGGLRSGLDVAKSIAIGAELGSAALPFLRAAVES 296 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ V IE R+ +MFL G K V+EL + + Sbjct: 297 AEKVREEIEYFRRGLKTAMFLTGCKNVEELKGLKVFVSGR 336 >gi|270293341|ref|ZP_06199550.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M143] gi|270278190|gb|EFA24038.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M143] Length = 333 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFSGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS V D SF ++ P +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSVALKDP-TDDSFSVKSSHPKLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVTEMNPLLLQVHVNVMQELLMPEGERKFRSWYSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + GI+ D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIILKEVGFGMDVKTIERAYELGIQTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVESYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + M L + +L ++ + Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADLQNVDYILYGK 325 >gi|147921500|ref|YP_684685.1| isopentenyl pyrophosphate isomerase [uncultured methanogenic archaeon RC-I] gi|110620081|emb|CAJ35359.1| isopentenyl-diphosphate delta-isomerase [uncultured methanogenic archaeon RC-I] Length = 357 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 131/342 (38%), Positives = 196/342 (57%), Gaps = 13/342 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+H++I + ++ + FDD LIHR LPE+ V FLG K S P++I Sbjct: 3 TSKRKIEHLDICVNEK-VESHGSGFDDVELIHRCLPELDKSAVSTETRFLGHKFSAPIMI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ + +N NLA AAE + + VGSQR D +S+ + R AP+ + Sbjct: 62 ASMTGGHPETT-VVNANLAKAAEALGIGIGVGSQRAALEDPAQEESYRVVRDAAPNAFIY 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GA Q+ + ++K +AV ++ AD L +HLN LQE IQP G+ N KIA ++S Sbjct: 121 GNIGAPQI-LHYDLEKIERAVKMIDADALAIHLNFLQEAIQPEGDLNAKGCLEKIAEVAS 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 ++ VP+++KE G G+S +D K+G+ D+ GRGGTSW+ +E +R + + Sbjct: 180 SLSVPVIVKETGAGISHIDAYTLRKAGVSALDVGGRGGTSWAGVEVYRARMEKDRIGEHL 239 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G F DWGIPT +S+ A IA+GG+R+G+ + KSI LGASL G+A P + A Sbjct: 240 GNKFWDWGIPTAVSIIEA---DVGLPIIATGGIRDGITVAKSIALGASLAGIALPLVSAA 296 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 DS D V +E +E +MFL G + ++ L A+I Sbjct: 297 RDSPDKVQEVLEVYIEELRATMFLTGAQSIEALKRAPAVITG 338 >gi|322387268|ref|ZP_08060878.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis ATCC 700779] gi|321141797|gb|EFX37292.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis ATCC 700779] Length = 333 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 177/338 (52%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---NSTYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA A+ + GS D + SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVADACGILFVTGSYSAALKDPS-DDSFSVKTSYPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F ++ Sbjct: 116 TNIG-----LDKPVELGLQTVKEMNPLLLQIHVNVMQELLMPEGERQFRLWQHNLSDYVE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VPL+LKEVG G+ I + GIR D++GRGGTS++ IE+ R + D D Sbjct: 171 QISVPLVLKEVGFGMDVKTIAKAYEMGIRTVDLSGRGGTSFAYIENRRSGQRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T +L A+ + ++ + + SGG+RN +DI+K ++ GA GL+ L+ + S D Sbjct: 228 WGQSTMQALLNAQDWKDKMELLVSGGVRNPLDIIKCLVFGAKAVGLSRTMLELVENYSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V++ IES +++ + M L K++++L L+ + Sbjct: 288 VVISIIESWKEDLRLIMCALNCKKIEDLQEVDYLLYGK 325 >gi|239635940|ref|ZP_04676958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus warneri L37603] gi|239598479|gb|EEQ80958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus warneri L37603] Length = 349 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I D+VD + + + +P+ I+ Sbjct: 7 EQRKNEHVEIAMAQH--DATLSDFDKVRFVHHSIPNIDVDDVDLTTKTSEFNMKYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ ++IN LAI A +T +AMAVGS + +SF +R+ P V+ S Sbjct: 65 AMTGGSE-WTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFTIVRETNPDGVIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA +AV +L A L +H+N QE++ P GN FA+ I + A Sbjct: 124 NVGA-----DVPVDKAVKAVELLDAQALQIHVNSPQELVMPEGNREFANWMENIEAIVKA 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S + L G+ Y D++GRGGT++ IE+ R D+ +W Sbjct: 179 VNVPVIVKEVGFGMSKETYKSLLNVGVTYVDVSGRGGTNFVDIENERRSNKDMD-YLSNW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL + + ++ ASGGLR +D +K + LGA G++ PFL Sbjct: 238 GQSTVESLLESSDFQDKLNVFASGGLRTPLDAVKCLALGAKAVGMSRPFLNQVEQAGITQ 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +ES M +L K + EL + + Sbjct: 298 TIEYVESFLDHMKKIMTMLDAKDINELTHKDMIFNTE 334 >gi|307704246|ref|ZP_07641165.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK597] gi|307622157|gb|EFO01175.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK597] Length = 336 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE++ S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHASLPLYDLDEINLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D A SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDP-ADDSFSVKSDHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVDEMNPLLLQVHVNVMQELLMPEGERKFRCWQSHLADYSQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYDLGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQDWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETHTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + EL L+ + Sbjct: 288 EVIDIVQGWKADLRLIMCALNCATIAELQKVDYLLYGK 325 >gi|157803691|ref|YP_001492240.1| isopentenyl pyrophosphate isomerase [Rickettsia canadensis str. McKiel] gi|166226207|sp|A8EYM2|IDI2_RICCK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157784954|gb|ABV73455.1| isopentenyl pyrophosphate isomerase [Rickettsia canadensis str. McKiel] Length = 342 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 136/330 (41%), Positives = 199/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI I K F+ IH ALPEI++D +D + FLGK L P+LISS Sbjct: 10 ERKQEHIEINLTKNIESTLKSGFESIQFIHNALPEINYDNIDTTTTFLGKALQAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K +AM +GS RV+ + + IK+F +R AP +L++N+ Sbjct: 70 MTGGTARARD-INYRLAEAAQKAGIAMGLGSMRVLLAAADTIKTFAVRHIAPDILLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V AD L LHLN LQE+ QP GN N+A+L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLVDATKADALILHLNVLQELTQPEGNRNWANLLPKIREVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + + G++ DIAG GGTSWS++E++R L++ I F + Sbjct: 189 VPVIVKEVGYGLSKQVAKSLIDVGVKTLDIAGSGGTSWSQVEAYRAKNSLQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R IASGGL++G+D K+I +GA++ GLA LK +S Sbjct: 249 WGIPTLDSLKMVREISKNVSIIASGGLKSGIDGAKAIRMGANIFGLAGQLLKAVDNSEYL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V I+ + K+ ++M G++ +++L Sbjct: 309 VSEEIQLIIKQLKITMLCTGSRTLKDLTKA 338 >gi|255513578|gb|EET89844.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 375 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 135/344 (39%), Positives = 206/344 (59%), Gaps = 10/344 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ RK +HI I P RN + F D L++ ++PEI FD++D SV FLGK+ S P Sbjct: 20 LIMKRKEEHIRICLDKPVQARNVRTLFSDVKLMNDSMPEIDFDDIDTSVSFLGKRFSAPF 79 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 ++ +MTGG M +RIN N+A A E+ + MAVGSQR D ++ + R+ PH Sbjct: 80 MVGAMTGGAE-MAKRINANIASAVEELGLGMAVGSQRAALYDKILEDTYTIARKNGPHIF 138 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G QL+ ++ + V +L AD L++HLNP QEI+QP G + ++ S+I + Sbjct: 139 IGANIGGAQLSEGMDLKSIRKLVEMLKADALYVHLNPTQEIVQPEGEPKYRNVLSRIREI 198 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 +D P++ KEVG G+S + K+G++ ++AG GGTS++ +E +R + ++ Sbjct: 199 VEGIDRPVIAKEVGFGISPKVAKELEKAGVKAIEVAGMGGTSYAAVEWYRAKAFKMNDKA 258 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 D+G +F DWGIPT SL MA + ++SGGLR G+DI KSI LGAS+ +A P L+ Sbjct: 259 DLGNLFWDWGIPTAASLYMA-TRSVKLPVVSSGGLRTGLDIAKSIALGASMTAMALPVLR 317 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 PA S+DAV IE + E +MFLLG K +++L +I Sbjct: 318 PATVSADAVKDFIERILLELKSTMFLLGAKNIEQLGKCPFVITG 361 >gi|329929031|ref|ZP_08282833.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. HGF5] gi|328937020|gb|EGG33449.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. HGF5] Length = 370 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 174/338 (51%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RKI+H+ + + F+ + H ALPEI F E+ FL + P L Sbjct: 33 TGERKIEHVRLCLDEEVGSVGVTTGFERYRFRHAALPEIDFGEIKLDTTFLDFSVRTPFL 92 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ K IN LA AAE+ A+ VGS R +F +R+ AP +I Sbjct: 93 ISSMTGGS-KATGEINMRLAEAAERRGWALGVGSVRAAVEKEELASTFRVRESAPSVPVI 151 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FG+ +AV + GAD L LHLN LQE+ QP GNT F L +I L Sbjct: 152 ANLGAVQLNYGFGLDDCQRAVDIAGADMLVLHLNGLQEVFQPEGNTRFGRLLGRIEDLCR 211 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + +P+ +KEVG G+ L G + D+AG GGTSWS++E R + Sbjct: 212 TLSIPVGIKEVGWGIDGETARTLLDVGAAFIDVAGAGGTSWSQVEKFRSPDPVRRAAAEA 271 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WG PT + R + I SGGL++GVD K++ LGA L G L A+DS Sbjct: 272 FAGWGNPTADCIAEVREAAPDCALIGSGGLQSGVDAAKALALGADLAGFGRGLLGSAVDS 331 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A+ + + E +MF +G ++ L LIR Sbjct: 332 VEALDQRLAQVELELRTAMFGIGAGNIEALKSTKRLIR 369 >gi|330685389|gb|EGG97047.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU121] Length = 349 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 172/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I D+VD + + L +P+ I+ Sbjct: 7 EQRKNEHVEIAMAQH--DATLSDFDKVRFVHHSIPNIDVDDVDLTTKTSDFNLKYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ ++IN LAI A +T +AMAVGS + +SF +R+ P V+ S Sbjct: 65 AMTGGSE-WTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFTIVRETNPDGVIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA +AV +L A L +H+N QE++ P GN FA+ I + +A Sbjct: 124 NVGA-----DVPVDKAVKAVELLDAQALQIHVNSPQELVMPEGNREFANWMENIEAIVNA 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S + L G+ Y D++GRGGT++ IE+ R D+ +W Sbjct: 179 VDVPVIVKEVGFGMSKETYKSLLNVGVTYVDVSGRGGTNFVDIENERRSNKDMD-YLSNW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL + + ++ ASGGLR +D +K + LGA G++ PFL Sbjct: 238 GQSTVESLLESSDFQDKLNVFASGGLRTPLDAVKCLALGAKAVGMSRPFLNQVEQAGITQ 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +ES M +L K + EL + + Sbjct: 298 TIEYVESFLDHMKKIMTMLDAKDINELTHKDMIFNTE 334 >gi|15678077|ref|NP_275191.1| isopentenyl pyrophosphate isomerase [Methanothermobacter thermautotrophicus str. Delta H] gi|13878539|sp|O26154|IDI2_METTH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|2621084|gb|AAB84555.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 349 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 122/337 (36%), Positives = 199/337 (59%), Gaps = 9/337 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++DRK++H+ + R K F+D ++HRA+PEI+ +++D S++FLG++LS P++ Sbjct: 1 MISDRKLEHLILCASCDVEYRKKTGFEDIEIVHRAIPEINKEKIDISLDFLGRELSSPVM 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 IS++TGG+ + +INR LA AAEK +A+ +GSQR ++ + R+ AP +L Sbjct: 61 ISAITGGHPASM-KINRELARAAEKLGIALGLGSQRAGVEHPELEGTYTIAREEAPSAML 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+G+ ++ A +AV ++ AD L +HLNPLQE IQP G+ + + I+ + Sbjct: 120 IGNIGSSH------IEYAERAVEMIDADALAVHLNPLQESIQPGGDVDSSGALESISAIV 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++DVP+++KE G G+ S D G+ D+AG GGTSW+ +E++R + +G +F Sbjct: 174 ESVDVPVMVKETGAGICSEDAIELESCGVSAIDVAGAGGTSWAAVETYRADDRYLGELFW 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT S IASGG+R+G+D K+I LGA + G+A P L+ A Sbjct: 234 DWGIPTAASTVEV-VESVSIPVIASGGIRSGIDAAKAISLGAEMVGIALPVLEAAGHGYR 292 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V+ IE + +M+L G + + +L + +I Sbjct: 293 EVIKVIEGFNEALRTAMYLAGAETLDDLKKSPVIITG 329 >gi|307708223|ref|ZP_07644690.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis NCTC 12261] gi|307615669|gb|EFN94875.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis NCTC 12261] Length = 336 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 176/338 (52%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE ++ GS D A SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACEILFVTGSYSAALKDP-ADDSFSVKYDHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVTEMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++A+ + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALINAQDWKDKAELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADLQKVDYLLYGK 325 >gi|52786168|ref|YP_091997.1| isopentenyl pyrophosphate isomerase [Bacillus licheniformis ATCC 14580] gi|163119517|ref|YP_079589.2| isopentenyl pyrophosphate isomerase [Bacillus licheniformis ATCC 14580] gi|81609091|sp|Q65I10|IDI2_BACLD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|52348670|gb|AAU41304.1| putative protein [Bacillus licheniformis ATCC 14580] gi|145903024|gb|AAU23951.2| FMN/related compound-binding protein [Bacillus licheniformis ATCC 14580] gi|302311024|gb|ADL14373.1| isopentenyl-diphosphate delta isomerase [Bacillus licheniformis] Length = 349 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 115/336 (34%), Positives = 181/336 (53%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +HI+ + + DD +H +LPE +VD S + LS P+ I+ Sbjct: 4 AKRKKEHIDHALSTG--QKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K INR LA AA +T + +AVGSQ D + S+E +R+ ++ + Sbjct: 62 AMTGGGGKATFEINRALARAAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ AD L +HLN +QEI+ P G+ NF +I + + Sbjct: 122 NLGS-----EATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGDRNFTGRLRRIEDICRS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+ +KEVG G+S G++ D+ G GGT++S+IE+ R ++ F W Sbjct: 177 VSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAV--EFFDQW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T SL + IASGG+++ +D+ KSI LGAS G+A FLK +A Sbjct: 235 GISTAASLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + A IESL ++F M +LG + +++L +I+ Sbjct: 295 LAAEIESLIEDFKRIMTVLGCRTIEQLKKAPLVIKG 330 >gi|154151750|ref|YP_001405368.1| isopentenyl pyrophosphate isomerase [Candidatus Methanoregula boonei 6A8] gi|166226200|sp|A7IAG4|IDI2_METB6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154000302|gb|ABS56725.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanoregula boonei 6A8] Length = 359 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 132/345 (38%), Positives = 194/345 (56%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ I ++ ++ F D L+H ALPE +D S FLG LS PL + Sbjct: 9 TSSRKLDHLRICAEEE-VESGDAGFGDVRLVHHALPECDMRSIDLSTRFLGHTLSSPLFV 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ + N LA AE+ + M VGSQR + +F + R APH L+ Sbjct: 68 SAMTGGHP-GTKDANARLARIAERFGLGMGVGSQRAALENPALADTFSVVRDEAPHAFLV 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQL + G A QA+ ++GA+ + +HLN LQE IQP G+ + + IA L + Sbjct: 127 ANLGAVQLR-EHGAAWAGQAIEMIGANAIAIHLNFLQEAIQPEGDLSATGCIAAIADLCA 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------- 233 +P+++KE GCG+S L +G DI G GGTSW+ +ES R D Sbjct: 186 ETKIPVIVKETGCGISREVARLCWSAGAAAIDIGGWGGTSWAAVESFRADRKDAQGRALK 245 Query: 234 -IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G F WGIPT +SL + IASGG+R+G+D+ K + LGA L G+A P LK Sbjct: 246 TLGEDFAGWGIPTVVSLAEV--AGTGSPVIASGGIRSGIDMAKCLALGADLCGMALPLLK 303 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA++S +A+ A +E++ +E + SMFL G R++++ I + Sbjct: 304 PALESDEALAARVETIHRELVASMFLCGAARIRDMRRARLFITGR 348 >gi|315612570|ref|ZP_07887483.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis ATCC 49296] gi|315315551|gb|EFU63590.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis ATCC 49296] Length = 333 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHFSLPLYDLDEIDLSTEFAGHKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K E IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGSDKGRE-INQKLAQVAEACGILFVTGSYSAALKDP-TDNSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S+ Sbjct: 116 TNIG-----LDKPVELGLQTVEAMNPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSN 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPIVLKEVGFGMDVKTIERAYELGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQAWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + M L + +L ++ + Sbjct: 288 EVIGIVQGWKEDLRLIMCALNCATIADLQNVDYILYGK 325 >gi|15922379|ref|NP_378048.1| isopentenyl pyrophosphate isomerase [Sulfolobus tokodaii str. 7] gi|20978496|sp|Q96YW9|IDI2_SULTO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15623168|dbj|BAB67157.1| 369aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 369 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 202/340 (59%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RKI+H+ I ++ F+D LIH++LP S +V + FLGKK+S P++I Sbjct: 6 ITNRKIEHVEICL-YENVEFGSTLFEDVTLIHQSLPGFSLADVSTTTNFLGKKMSAPIII 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG ++ +IN +A E+ + M VGSQR+ ++F +R+ AP++ +I Sbjct: 65 TGMTGGLPEL-GKINETIAEVIEELGLGMGVGSQRIAIEKKETKETFSIVRKKAPNSPII 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLS 179 +NLGA Q + +++ +A+ ++ AD + +H N QE+ QP G N++ ++ K+ +S Sbjct: 124 ANLGAPQFVKGYSLEQVEEAIQMIEADAIAIHFNSAQEVFQPEGEPNYSIEILYKLIDIS 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLESDI 234 ++ VP+++KE G GLS ++ ++GI+YFD +G GGTSW +E +R + +++ Sbjct: 184 KSLKVPIIIKESGSGLSMEVTKMFYENGIKYFDTSGTGGTSWVSVEMYRGLRRNNWKAES 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +F DWGIPT S+ R + I SGG+RNG+++ K+I LGA +GG A P LK A Sbjct: 244 AKLFLDWGIPTAASIVEVRSIAQDGTIIGSGGVRNGLEVAKAIALGADIGGFALPALKAA 303 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + ++++ ++ + E V+MFL G K + EL +I Sbjct: 304 VKGKESLMNFLKKVIFELKVAMFLSGNKTIGELKKTPIVI 343 >gi|163790897|ref|ZP_02185321.1| isopentenyl pyrophosphate isomerase [Carnobacterium sp. AT7] gi|159873850|gb|EDP67930.1| isopentenyl pyrophosphate isomerase [Carnobacterium sp. AT7] Length = 355 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 110/335 (32%), Positives = 195/335 (58%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +N+RK +H+++ K +R K FD + +H + PE+ + S F ++FP I Sbjct: 4 MNNRKNEHVSLAEKFAKENR-KSDFDSFRFVHHSFPEMKVSDATLSTSFATLDMAFPFYI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +++TGG+ +++N LA+ A +T +AMA GS D SF +R+ P + Sbjct: 63 NAITGGSP-WTKKVNEKLALIARETGIAMATGSISAALKDPTVKDSFTIVREINPTGKVF 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG Q ++ A +AV ++ AD L +H+N QEI+ P G+ +F++ +++ + Sbjct: 122 ANLGTGQ-----TLENAKKAVELVQADALQIHVNSPQEIVMPEGDRDFSNWLTELEKIVH 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KEVG G+S I+ G++ DI+G+GGT++++IE++R +SD + Sbjct: 177 HVSVPVIVKEVGFGMSRETIQQLTSIGVQTIDISGQGGTNFAQIENYRR-DSDKYDYLEG 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG T +SL A+PY N+ + +ASGG+RN +DI+KS+ LGA G++ FL A+ D + Sbjct: 236 WGQSTVISLVEAQPYVNQVEILASGGIRNPLDIIKSLSLGARAVGISGLFLHMALRDGVE 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + IE+ +K+ + M LLG K +++L ++ Sbjct: 296 TTILEIEAWKKQLVSIMTLLGKKSIKDLTQTDVIL 330 >gi|261409700|ref|YP_003245941.1| isopentenyl pyrophosphate isomerase [Paenibacillus sp. Y412MC10] gi|261286163|gb|ACX68134.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. Y412MC10] Length = 370 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 174/338 (51%), Gaps = 5/338 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RKI+H+ + + F+ + H ALPEI F E+ FL + P L Sbjct: 33 TGERKIEHVRLCLDEEVGSVGVTTGFERYRFRHAALPEIDFGEIKLDTTFLDFSVRTPFL 92 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ K IN LA AAE+ A+ VGS R +F +R+ AP +I Sbjct: 93 ISSMTGGS-KATGEINMRLAEAAERRGWALGVGSVRAAVEKEELASTFRVRESAPSVPVI 151 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FG+ +AV + GAD L LHLN LQE+ QP GNT F L +I L Sbjct: 152 ANLGAVQLNYGFGLDDCQRAVDIAGADMLVLHLNGLQEVFQPEGNTRFGRLLGRIEDLCR 211 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + +P+ +KEVG G+ + L G + D+AG GGTSWS++E R + Sbjct: 212 TLSIPVGIKEVGWGIDGETAQTLLDVGAAFIDVAGAGGTSWSQVEKFRSPDPVRRAAAEA 271 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WG PT + R I SGGL++GVD K++ LGA L G L A+DS Sbjct: 272 FAGWGNPTAECIAEVREAAPACALIGSGGLQSGVDAAKALALGADLAGFGRGLLGSAVDS 331 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A+ + + E +MF +G ++ L LIR Sbjct: 332 VEALDQRLAQVELELRTAMFGIGAGNIEALKSTRRLIR 369 >gi|10803607|ref|NP_046005.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|10803696|ref|NP_046094.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|7444262|pir||T08277 carotenoid biosynthesis protein homolog H0660 - Halobacterium sp. (strain NRC-1) plasmid pNRC100 gi|2822338|gb|AAC82844.1| unknown [Halobacterium sp. NRC-1] gi|2822427|gb|AAC82933.1| unknown [Halobacterium sp. NRC-1] Length = 379 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 139/345 (40%), Positives = 202/345 (58%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DH+ IV ++ ++ FDD HL+H ALPE+ +D +DPS++FLG LS P+ I Sbjct: 28 TEDRKDDHLQIV-QERDVETTGTGFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIFI 86 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTV 118 SMTGG++ E INR LA AA +T +AM +GSQR D ++S+ + R AP Sbjct: 87 ESMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDAF 145 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I + Sbjct: 146 IYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIERV 204 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ES 232 S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 205 SEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQK 264 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 IG +F++WGIPT S IASGG+R G+D+ K+I LGA GGLA PFLK Sbjct: 265 QIGTLFREWGIPTAASTIEC--VAEHDCVIASGGVRTGLDVAKAIALGARAGGLAKPFLK 322 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA D DAV+ + L E +MF+ G+ + EL ++ + Sbjct: 323 PATDGPDAVIERVGDLIAELRTAMFVTGSGSIDELQQVEYVLHGK 367 >gi|322377080|ref|ZP_08051572.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M334] gi|321281793|gb|EFX58801.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. M334] Length = 336 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS D SF ++ P +L Sbjct: 58 INAMTGGSEK-GKEINQKLAQVAEACGILFVTGSYSAALKDP-TDDSFSVKSDHPSLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLHTVVEMNPLLLQVHVNVMQELLMPEGERMFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G++ FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVQTFDLSGRGGTSFAYIENRRSGQRD---YLDQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVESYTIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I+ + + + M L + +L L+ + Sbjct: 288 EVIGIIQGWKADLRLIMCALNCATIADLQKVDYLLYGK 325 >gi|332796337|ref|YP_004457837.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidianus hospitalis W1] gi|332694072|gb|AEE93539.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidianus hospitalis W1] Length = 365 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 128/341 (37%), Positives = 210/341 (61%), Gaps = 8/341 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++H+ I + FDD LIH+A+P +SF+E++ +V+FL K++S PL+ Sbjct: 1 MITNRKLEHVEICLYEDIEGYIPTLFDDVVLIHQAMPCLSFNEINTNVKFLNKEISAPLM 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++ MTGG N+ + +IN +A E+ ++AM VGSQR+ +A +SF+ +R+ AP + + Sbjct: 61 VTGMTGG-NEALGKINATIAEVIEELRLAMGVGSQRIAIERADARESFKIVRKKAPTSPI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSKIALL 178 I+N+GA QL +G+++ +AV ++ AD + +HLNP QE+ QP G + +D+ K+ + Sbjct: 120 IANIGAPQLAKGYGLKELKEAVSMIEADAIAVHLNPAQELFQPEGEPEYPSDILIKLRDI 179 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL-----ESD 233 S + VP+++KE G G+S + GI+YFD++G+GGTSW +E RD + + Sbjct: 180 SKELGVPIIIKETGTGISMETATKFKEIGIKYFDVSGQGGTSWIAVEMVRDKRKNNWKKE 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +F WGIPT S+ R +A I SGG+RNG+ I K+I LGA + G+ASP LK Sbjct: 240 SAELFAGWGIPTAASIIETRFAVPDAFIIGSGGIRNGLQIAKAIALGADIAGMASPVLKK 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++ +++V+ + E +M L G K V+EL +I Sbjct: 300 AVEGKESLVSFFNKVIFELKAAMMLTGAKNVEELKRVPVVI 340 >gi|159041710|ref|YP_001540962.1| isopentenyl pyrophosphate isomerase [Caldivirga maquilingensis IC-167] gi|157920545|gb|ABW01972.1| isopentenyl-diphosphate delta-isomerase, type 2 [Caldivirga maquilingensis IC-167] Length = 374 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 189/337 (56%), Gaps = 7/337 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ FD LIH ALPE+ F++VD ++E K+LSFP + Sbjct: 1 MIGGRKDEHIRIA-SSSDVEVGDSLFDGVQLIHNALPEMDFNDVDSTIELFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I ++TGG R+N LA AAE+ + M VGSQR+ SF + + AP + Sbjct: 60 IGALTGGTE-TAGRVNAVLAKAAEEFGIGMYVGSQRIALMKPETAWSFRVVKDNAPSALK 118 Query: 120 ISNLGAVQLNYDFG---VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q++ V ++AV ++ AD + +HLNP QE+ QP G F+ + SK+ Sbjct: 119 IANLGAPQVSRLSDRDLVDWVNEAVDMINADAVAIHLNPAQELFQPEGEPWFSGVLSKLK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L+ ++ PL++KEVG G+S + D+AG GGTS+ RIE+ R + + Sbjct: 179 LIRRVVNRPLIIKEVGNGVSMEVARMLNSIPPDAIDVAGHGGTSFIRIEAIRGGDVNEAD 238 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 VF+DWGIPT LS+ + IASGG+RNG+D K+I LGA ++ P L A+ Sbjct: 239 VFRDWGIPTVLSICEVSSVYDGV-IIASGGVRNGLDGAKAIALGADAFTMSRPMLVSALK 297 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AV I L EF +MFL G++RV++L + Sbjct: 298 GYEAVRELINKLMWEFKATMFLTGSRRVEDLKKTPVV 334 >gi|304407441|ref|ZP_07389093.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus curdlanolyticus YK9] gi|304343392|gb|EFM09234.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus curdlanolyticus YK9] Length = 359 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 132/339 (38%), Positives = 187/339 (55%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +HI I ++ G + F+ + +H ALPE+SFD + FLGKKL PLL Sbjct: 16 TAKRKGEHIRICLEEEVGAVGVQSGFERYRFLHNALPELSFDSISLETFFLGKKLRAPLL 75 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 +SSMTGG ++ IN LA AAE A+ +GS R + + SF +R+ AP +I Sbjct: 76 VSSMTGGTDEAS-SINLRLAEAAEARGWAIGLGSMRAAIEEESLAASFRIREVAPSVPVI 134 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQL +G + +AV + AD L LHLN +QE+ QP G+T+F+ L +I + Sbjct: 135 ANLGAVQLGLGYGAAQCRRAVELAEADALVLHLNGMQELFQPEGDTDFSSLLRRIGEVCE 194 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 ++VP+ +KEVG G+ L +G+ + D+AG GGTSWS++E R + V Sbjct: 195 QLEVPVGVKEVGWGIDGRTASRLLDAGVAFIDVAGAGGTSWSQVEKFRSTDPMRRAAAEV 254 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--M 295 F DWGIPT + R A +ASGGLRNGV+ K+I LGA L G L A + Sbjct: 255 FADWGIPTAACITDVRREQPSAVLVASGGLRNGVEAAKAIALGADLVGFGRTLLPNAATL 314 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + +V E + E +MF +G K VQ L L+ Sbjct: 315 EGNASVEQQFEQIEFELRAAMFGIGAKDVQTLRETDRLV 353 >gi|309791751|ref|ZP_07686241.1| isopentenyl-diphosphate delta-isomerase, type 2 [Oscillochloris trichoides DG6] gi|308226244|gb|EFO79982.1| isopentenyl-diphosphate delta-isomerase, type 2 [Oscillochloris trichoides DG6] Length = 327 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 132/319 (41%), Positives = 186/319 (58%), Gaps = 6/319 (1%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 +D F + L H A+PEI +VD FLGK L PLLISSMTGG + + E+ Sbjct: 4 EDVAAKGVSTGFGAYRLPHTAIPEIDLADVDTRTTFLGKSLRAPLLISSMTGGAS-VAEQ 62 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 IN LA AAE +AM VGSQR +D ++++R+ AP+ L++N+GAVQLNY +GV Sbjct: 63 INLALAEAAEYLGLAMGVGSQRAAIADPRLAHTYQVRRVAPNIALLANIGAVQLNYGYGV 122 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 ++ +A+ ++ AD L LHLNPLQE +QP GNTNF L KI + + VP+++KEVG G Sbjct: 123 EQCRRAIEMIEADALILHLNPLQEAVQPEGNTNFKGLLGKIEAVCKELPVPVVIKEVGNG 182 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDWGIPTPLSLEM 251 + + D + G+R D+AG GGTSWS +E R D + F DWGIPT + Sbjct: 183 IGADDARRLYECGVRVIDVAGAGGTSWSEVERFRQTSDQGRRVAGAFADWGIPTAECIRE 242 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD--SSDAVVAAIESLR 309 R I SGG+R GVD+ K+I LGA + G P L ++ ++AV+ +E+L Sbjct: 243 VRAALPHVTLIGSGGVRTGVDVAKAIALGADVVGTTKPALADSISERGAEAVIEGLEALL 302 Query: 310 KEFIVSMFLLGTKRVQELY 328 +E V+M G ++ L Sbjct: 303 RELRVAMLCSGCVDLRALR 321 >gi|306825824|ref|ZP_07459163.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432185|gb|EFM35162.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 333 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS D SF ++ P+ +L Sbjct: 58 INAMTGGS-KKGKEINQKLAQVAEACGILFVTGSYSAALKDP-TDGSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVDLGLQTVQAMDPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VPL+LKEVG G+ + I + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 RIPVPLVLKEVGFGMDAKTIGRAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ S + Sbjct: 228 WGQSTMQALLNAQGWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIETYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L ++ + Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADLQNVDYILYGK 325 >gi|168485526|ref|ZP_02710034.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1087-00] gi|225858239|ref|YP_002739749.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae 70585] gi|254803428|sp|C1C5C3|IDI2_STRP7 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183571090|gb|EDT91618.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1087-00] gi|225720747|gb|ACO16601.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 70585] gi|332204406|gb|EGJ18471.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA47901] Length = 336 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|15900307|ref|NP_344911.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TIGR4] gi|111657158|ref|ZP_01407938.1| hypothetical protein SpneT_02001623 [Streptococcus pneumoniae TIGR4] gi|148996795|ref|ZP_01824513.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP11-BS70] gi|149012128|ref|ZP_01833237.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP19-BS75] gi|168576779|ref|ZP_02722637.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae MLV-016] gi|182683349|ref|YP_001835096.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CGSP14] gi|221231255|ref|YP_002510407.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae ATCC 700669] gi|298230948|ref|ZP_06964629.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254645|ref|ZP_06978231.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502184|ref|YP_003724124.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TCH8431/19A] gi|307067040|ref|YP_003876006.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] gi|20978500|sp|Q97SH8|IDI2_STRPN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|226707321|sp|B2ILS5|IDI2_STRPS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803429|sp|B8ZLF5|IDI2_STRPJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14971854|gb|AAK74551.1| FMN-dependent dehydrogenase family protein [Streptococcus pneumoniae TIGR4] gi|147757370|gb|EDK64409.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP11-BS70] gi|147763730|gb|EDK70664.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP19-BS75] gi|182628683|gb|ACB89631.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CGSP14] gi|183577581|gb|EDT98109.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae MLV-016] gi|220673715|emb|CAR68211.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae ATCC 700669] gi|298237779|gb|ADI68910.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae TCH8431/19A] gi|301793632|emb|CBW36015.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae INV104] gi|306408577|gb|ADM84004.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] Length = 336 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|148983788|ref|ZP_01817107.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP3-BS71] gi|149006136|ref|ZP_01829865.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP18-BS74] gi|307126596|ref|YP_003878627.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 670-6B] gi|147762492|gb|EDK69453.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP18-BS74] gi|147923935|gb|EDK75047.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP3-BS71] gi|301799494|emb|CBW32040.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae OXC141] gi|306483658|gb|ADM90527.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae 670-6B] gi|332076824|gb|EGI87286.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA17545] gi|332077672|gb|EGI88133.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA41301] Length = 336 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYIK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|23097992|ref|NP_691458.1| isopentenyl pyrophosphate isomerase [Oceanobacillus iheyensis HTE831] gi|32129631|sp|Q8EST0|IDI2_OCEIH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|22776216|dbj|BAC12493.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase) [Oceanobacillus iheyensis HTE831] Length = 349 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 130/336 (38%), Positives = 185/336 (55%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +N RK +HI + N + + IH ALPEI F ++ FLGK+L P L Sbjct: 5 INQRKTEHIRLCLTGNVEGVNKSTGLEGINFIHNALPEIDFADISLESSFLGKQLKAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 +SSMTGG+ + +IN+NLAIAAE+ A+A+GS R +SF +R AP LI Sbjct: 65 VSSMTGGSE-LATKINQNLAIAAEEKGWALAIGSTRAFLESDQHKESFLIRNQAPTAPLI 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQLNY +G ++ + + AD + LHLN LQE +Q G+ NF DL KI + Sbjct: 124 VNIGAVQLNYGYGPEECQRIIDKTNADSIVLHLNSLQEAVQDGGDLNFKDLLPKIEQVCK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 + P+ +KEVG G+ +GI Y D+AG GGTSWS++E R L Sbjct: 184 QVKAPVGVKEVGFGIDGEVARRLYDAGISYIDVAGAGGTSWSQVEKLRSKDPLNKAAAEA 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F +WG PT L R EA +ASGG++ GVD K+I +GA + G A LK AM++ Sbjct: 244 FNNWGTPTKDCLVSVRGELPEAPLVASGGMKTGVDAAKAITIGADVVGFARHLLKAAMET 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V+ +E L E ++MF +G ++EL + + Sbjct: 304 PEDVIRTMEQLELELKMTMFGIGAVNLEELKNTSRV 339 >gi|15902385|ref|NP_357935.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae R6] gi|116515768|ref|YP_815862.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae D39] gi|149018082|ref|ZP_01834541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP23-BS72] gi|32129628|sp|Q8DR48|IDI2_STRR6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|122279252|sp|Q04M86|IDI2_STRP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|15457899|gb|AAK99145.1| Isopentenyl diphosphate isomerase [Streptococcus pneumoniae R6] gi|116076344|gb|ABJ54064.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae D39] gi|147931646|gb|EDK82624.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP23-BS72] Length = 336 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|159040817|ref|YP_001540069.1| isopentenyl pyrophosphate isomerase [Caldivirga maquilingensis IC-167] gi|157919652|gb|ABW01079.1| isopentenyl-diphosphate delta-isomerase, type 2 [Caldivirga maquilingensis IC-167] Length = 377 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 187/337 (55%), Gaps = 7/337 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ FD LIH ALPE+ F++VD ++E K+LSFP + Sbjct: 1 MIGGRKDEHIRIA-SSSDVEVGDSLFDGVQLIHNALPEMDFNDVDSTIELFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I ++TGG R+N LA AAE+ + M VGSQR+ SF + + AP + Sbjct: 60 IGALTGGTE-TAGRVNAVLAKAAEEFGIGMYVGSQRIALMKPETAWSFRVVKDNAPSALK 118 Query: 120 ISNLGAVQLNYDFG---VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q++ V ++AV ++ AD + +HLNP QE+ QP G F+ + K+ Sbjct: 119 IANLGAPQVSRLSDRDLVDWVNEAVDMINADAVAIHLNPAQELFQPEGEPWFSGVLGKLK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L+ ++ PL++KEVG G+S + D+AG GGTS+ RIE+ R E Sbjct: 179 LIRRVVNRPLIIKEVGNGVSMEVARMLNSIPPDAIDVAGHGGTSFIRIEAIRGGELSKAD 238 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 VF+DWGIPT LS+ + IASGG+RNG+D K+I LGA ++ P L A+ Sbjct: 239 VFRDWGIPTVLSICEVSSVYDGV-IIASGGVRNGLDGAKAIALGADAFTMSRPMLVSALK 297 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AV I L EF +MFL G++RV++L + Sbjct: 298 GYEAVRELINKLMWEFKATMFLTGSRRVEDLKKTPVV 334 >gi|289550064|ref|YP_003470968.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus lugdunensis HKU09-01] gi|315659307|ref|ZP_07912171.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus lugdunensis M23590] gi|289179596|gb|ADC86841.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus lugdunensis HKU09-01] gi|315495732|gb|EFU84063.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus lugdunensis M23590] Length = 350 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I +V+ S KL +PL I+ Sbjct: 7 EQRKNEHVEIAMAQ--QDAPASDFDRVRFVHHSIPHIDVAQVNLSTHTSNFKLDYPLYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++IN LA A +T +AMAVGS + + I+SF + RQ P V+ S Sbjct: 65 AMTGGSE-WTKQINEKLATVARETGLAMAVGSTHAALRNPDMIESFRIARQVNPEGVIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V++A +AV ++ A L +H+N QE++ P GN FA IA + + Sbjct: 124 NVGA-----DVPVERAVEAVELMEAQALQIHVNAPQELVMPEGNRTFASWMDNIAKMINH 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G S + G+ Y D++GRGGT++ IE+ R D+ +W Sbjct: 179 VPVPVIIKEVGFGFSKETFKALKDIGVTYVDVSGRGGTNFVSIENERRSNKDMN-YLANW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T SL ++ Y + ASGG+R +D +KS+ LGA G++ PFL + + Sbjct: 238 GQSTVESLLESQAYQSSLNIFASGGIRTPLDAIKSLALGAKAVGMSRPFLNHVENEGVEQ 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + M +L ++ L + + Q Sbjct: 298 TITFVAQFTTQMQQIMTMLNAPDIEALKQSQLIFDQQ 334 >gi|146304883|ref|YP_001192199.1| isopentenyl pyrophosphate isomerase [Metallosphaera sedula DSM 5348] gi|172046960|sp|A4YIM3|IDI2_METS5 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145703133|gb|ABP96275.1| isopentenyl-diphosphate delta-isomerase, type 2 [Metallosphaera sedula DSM 5348] Length = 366 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 193/341 (56%), Gaps = 8/341 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK++H+ I + +D LIH+A+P ++F +VD EFLGK LS PL+++ Sbjct: 5 NRKLEHVEICLYEDVQGIVSTLLEDVTLIHQAMPRMNFRDVDTRAEFLGKTLSLPLMVTG 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ ++ ++N +A E+ +AM VGSQRV +SF++ R+ AP L++N Sbjct: 65 MTGGHEEL-GKVNAVIAEVVEELGLAMGVGSQRVAVERPETAESFKVTRRMAPTAPLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLSSA 181 LG Q+ +GV++ A+ ++ A+ + +HLNP QE+ QP G + + +S Sbjct: 124 LGLPQVTRGYGVKQFMDAIQMIEANAIAVHLNPAQELFQPEGEPEYPLSALEALRDISKE 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----DIGI 236 ++VP+++KE G G+S +L G + D++G+GGTSW +E R+ + Sbjct: 184 LNVPVIVKESGTGMSMETAKLLADHGFKILDVSGQGGTSWIAVEMVRNRRKGNWKYESSQ 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F WGIPT S+ R ++ IASGG+RNG+D+ KSI LGA++ G+A+P L A+ Sbjct: 244 LFSGWGIPTAASIVETRYSVPDSYIIASGGIRNGLDVAKSISLGANIAGMANPVLHHAVR 303 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + E + + +MFL G++ V+ L +I + Sbjct: 304 GKEQLKKFFEEVAFQLRAAMFLTGSRDVKTLRHAPLVISGK 344 >gi|323342437|ref|ZP_08082669.1| isopentenyl-diphosphate delta-isomerase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463549|gb|EFY08743.1| isopentenyl-diphosphate delta-isomerase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 331 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 183/338 (54%), Gaps = 11/338 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M + RK +H+ + + FD +IH++LP I+ +VD S++FLG+ + +P+ Sbjct: 1 MRSKRKDEHVTLALRQNVYQ---SDFDTIRIIHQSLPNINLSDVDASIQFLGQTMKYPIY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K E +NR LA A + MAVGSQ D + S+ + R P + Sbjct: 58 INAMTGGSEK-TEILNRKLARIARVFGLPMAVGSQHAALDDPSLASSYRVVRDENPSGFI 116 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+GA + V+ +A+ ++ A+ L +H+N QEI G+ +F+ I + Sbjct: 117 IGNVGA-----NATVEDVKRAIKMIDANALGIHINVAQEIAMDEGDRDFSHWIENITQIV 171 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +++DVP+++KEVG G+S + G+R+ D++GRGGT++ IE+ R Sbjct: 172 ASVDVPVIVKEVGFGMSDKTVAQLYACGVRHVDVSGRGGTNFVWIENERSQGKRYN-YLS 230 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGI T SL M + Y + ASGG++N +D +K +ILGA G++ FLK A SD Sbjct: 231 DWGITTVESLIMTKSYQEKCNIFASGGIQNPLDAMKCLILGAQAVGISGYFLKAAHLESD 290 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ + ++F M L+G K ++EL I + Sbjct: 291 AMFEEVSMFLEDFKKLMVLVGAKTIKELPNVEYTIHGK 328 >gi|16120045|ref|NP_395633.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|16120317|ref|NP_395905.1| isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|169237224|ref|YP_001690430.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|169237728|ref|YP_001690931.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|13878554|sp|Q9HHE4|IDI2_HALSA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|10584141|gb|AAG20768.1| carotenoid biosynthetic protein [Halobacterium sp. NRC-1] gi|10584461|gb|AAG21040.1| carotenoid biosynthetic protein [Halobacterium sp. NRC-1] gi|167728290|emb|CAP15089.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] gi|167728505|emb|CAP15329.1| isopentenyl-diphosphate delta-isomerase, type II [Halobacterium salinarum R1] Length = 360 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 139/345 (40%), Positives = 202/345 (58%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DH+ IV ++ ++ FDD HL+H ALPE+ +D +DPS++FLG LS P+ I Sbjct: 9 TEDRKDDHLQIV-QERDVETTGTGFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIFI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTV 118 SMTGG++ E INR LA AA +T +AM +GSQR D ++S+ + R AP Sbjct: 68 ESMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDAF 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I + Sbjct: 127 IYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIERV 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ES 232 S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 186 SEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQK 245 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 IG +F++WGIPT S IASGG+R G+D+ K+I LGA GGLA PFLK Sbjct: 246 QIGTLFREWGIPTAASTIEC--VAEHDCVIASGGVRTGLDVAKAIALGARAGGLAKPFLK 303 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA D DAV+ + L E +MF+ G+ + EL ++ + Sbjct: 304 PATDGPDAVIERVGDLIAELRTAMFVTGSGSIDELQQVEYVLHGK 348 >gi|284162659|ref|YP_003401282.1| isopentenyl-diphosphate delta-isomerase, type 2 [Archaeoglobus profundus DSM 5631] gi|284012656|gb|ADB58609.1| isopentenyl-diphosphate delta-isomerase, type 2 [Archaeoglobus profundus DSM 5631] Length = 359 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 130/339 (38%), Positives = 197/339 (58%), Gaps = 11/339 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DHI I ++ + F+D LIH+A+PEI FDE+D SV+FLGK++S P LI Sbjct: 10 TSKRKLDHIEICLNKE-VESSYSGFEDVMLIHKAIPEIDFDEIDTSVDFLGKRISAPFLI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +S+TGG+ K IE IN+NLA A E + M VGSQR + +SF +R++AP + Sbjct: 69 ASITGGHEKAIE-INKNLASAVEDLGLGMGVGSQRAGIEGGDL-ESFTIVREFAPKAFVY 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G Q+ D V+ A +AV ++ AD L +HLN LQE IQP G+ I + Sbjct: 127 ANIGLPQVIRD--VEIAEKAVEMIDADALAIHLNYLQEAIQPEGDKFSRSAYDAIEEVCK 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVF 238 ++ VP+++KE G G+S G+ D+ G+GGTS+S +ES+R +++IG F Sbjct: 185 SLKVPVIIKETGAGISRGIALKLKAVGVSALDVGGKGGTSFSAVESYRCEGYKAEIGRDF 244 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT S+ IA+GG+R+G+D+ K++ LGA +G A PFLK A++ Sbjct: 245 WDWGIPTAYSIVECYDI---LPVIATGGIRSGLDLAKALALGAVVGSSALPFLKRALEGV 301 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++V + V+MFL G + ++L I + Sbjct: 302 ESVKELLRYYIDGLKVAMFLTGCRSCEDLRKVEIFISGK 340 >gi|304314298|ref|YP_003849445.1| isopentenyl-diphosphate delta-isomerase [Methanothermobacter marburgensis str. Marburg] gi|302587757|gb|ADL58132.1| predicted isopentenyl-diphosphate delta-isomerase [Methanothermobacter marburgensis str. Marburg] Length = 348 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 121/338 (35%), Positives = 201/338 (59%), Gaps = 9/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++DRK++H+ + R F++ ++HRA+PEI+ +++D ++FLGK+LS P++ Sbjct: 1 MISDRKLEHLILCTSCDVEYRKSTGFEEIEMVHRAIPEINREKIDIGLDFLGKELSSPIM 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 IS++TGG+ + +INR LA AAE+ +A+ +GSQR +++ + R+ AP +L Sbjct: 61 ISAITGGHPAAL-KINRELARAAEELGIALGLGSQRAGVEHPEVEETYAIARKEAPSAML 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+G+ ++ A +AV ++ AD L +HLNPLQE IQP G+ + I+ + Sbjct: 120 VGNIGSSH------IEYAERAVEMIDADALAVHLNPLQESIQPGGDVDSTGALESISSIV 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +MDVP+++KE G G+SS D G+ D+AG GGTSW+ +E++R + +G +F Sbjct: 174 KSMDVPVMVKETGAGISSEDAIKLEACGVAAIDVAGAGGTSWAAVETYRADDRYLGELFW 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 DWGIPT S IASGG+R+G+D K+I LGA++ G+A P L+ A Sbjct: 234 DWGIPTAASTVEV-AESVNVPVIASGGIRSGLDAAKAIALGATMAGIALPVLEAAGQGYR 292 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AV+ IE + +M+L G + + +L + +I + Sbjct: 293 AVIRVIERFNEALKTAMYLAGAETLDDLRNSQVIIMGR 330 >gi|225860416|ref|YP_002741925.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae Taiwan19F-14] gi|225727025|gb|ACO22876.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae Taiwan19F-14] gi|327390801|gb|EGE89141.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA04375] Length = 336 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGFQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|70725713|ref|YP_252627.1| isopentenyl pyrophosphate isomerase [Staphylococcus haemolyticus JCSC1435] gi|91207077|sp|Q4L8K4|IDI2_STAHJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|68446437|dbj|BAE04021.1| Isopentenyl-diphosphate delta-isomerase [Staphylococcus haemolyticus JCSC1435] Length = 349 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D + FD +H ++P I+ DEVD + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAPQSDFDRVRFVHHSIPSINVDEVDLTSRTTDFDMTYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++IN LA+ A +T +AMAVGS + +SF + RQ P ++ S Sbjct: 65 AMTGGSE-WTKQINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIARQTNPEGIIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA +AV +L A L +H+N QE++ P GN F+ +A + Sbjct: 124 NVGA-----DVPVDKAVEAVSLLDAQALQIHVNAPQELVMPEGNREFSTWLDNVAAIVQR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S + + G+ Y D++G+GGT++ IE+ R D+ +W Sbjct: 179 VDVPVIIKEVGFGMSKELYKDLIDVGVTYVDVSGKGGTNFVTIENERRSNKDMD-YLANW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL + Y + ASGG+R +D++KS+ LGA G++ PFL + Sbjct: 238 GQSTVESLLESSAYQDSLNVFASGGVRTPLDVVKSLALGAKAVGMSRPFLNQVENGGITT 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +ES + M +L + + EL + + H+ Sbjct: 298 TIEYVESFIEHTKSIMTMLNARDISELKQSKFVFDHK 334 >gi|168494573|ref|ZP_02718716.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC3059-06] gi|183575505|gb|EDT96033.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC3059-06] Length = 336 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|307711409|ref|ZP_07647825.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK321] gi|307616782|gb|EFN95966.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus mitis SK321] Length = 336 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DEVD S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEVDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE ++ GS D + SF ++ P+ ++ Sbjct: 58 INAMTGGSEK-GKEINQKLAQVAEACEILFVTGSYSAALKDPSDA-SFSVKADHPNLLIG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q + + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTIDEMTPLLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + SGG+RN +D++K ++ GA GL+ L+ + + + Sbjct: 228 WGQSTMQALLNAQEWKDKVGLLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELIENYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + EL ++ + Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIAELQNVDYILYGK 325 >gi|148994464|ref|ZP_01823665.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP9-BS68] gi|168482618|ref|ZP_02707570.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1873-00] gi|168488081|ref|ZP_02712280.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP195] gi|169832980|ref|YP_001693896.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae Hungary19A-6] gi|225853959|ref|YP_002735471.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae JJA] gi|225856121|ref|YP_002737632.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae P1031] gi|303255736|ref|ZP_07341779.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae BS455] gi|303259459|ref|ZP_07345436.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP-BS293] gi|303262990|ref|ZP_07348924.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS292] gi|303263543|ref|ZP_07349466.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS397] gi|303267347|ref|ZP_07353206.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS457] gi|303269848|ref|ZP_07355593.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS458] gi|147927213|gb|EDK78248.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP9-BS68] gi|168995482|gb|ACA36094.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae Hungary19A-6] gi|172043711|gb|EDT51757.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC1873-00] gi|183573034|gb|EDT93562.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP195] gi|225723080|gb|ACO18933.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae JJA] gi|225726081|gb|ACO21933.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae P1031] gi|301801299|emb|CBW33979.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pneumoniae INV200] gi|302597296|gb|EFL64399.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae BS455] gi|302635881|gb|EFL66382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS292] gi|302639393|gb|EFL69851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP-BS293] gi|302640616|gb|EFL71018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS458] gi|302643118|gb|EFL73406.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS457] gi|302647316|gb|EFL77540.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae BS397] gi|332075235|gb|EGI85705.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA17570] gi|332203550|gb|EGJ17617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA47368] Length = 336 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|308071172|ref|YP_003872777.1| Isopentenyl-diphosphate delta-isomerase [Paenibacillus polymyxa E681] gi|305860451|gb|ADM72239.1| Isopentenyl-diphosphate delta-isomerase [Paenibacillus polymyxa E681] Length = 366 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 127/336 (37%), Positives = 178/336 (52%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RKI+H+ + ++ + + + H ALPE+ FDEV FLG+ + PL Sbjct: 26 TGERKIEHVRLCLQEDVAGKGITSGLERYAFKHCALPELHFDEVRLDTIFLGQAVRTPLF 85 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ + IN LA AE+ A+ VGS R +F +R+ AP ++ Sbjct: 86 ISSMTGGSAE-TGAINERLAETAERRGWALGVGSVRAAVEREELASTFAVRRLAPSIPIL 144 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FGV +AV + GAD L LHLN LQEI QP GN +F+ L +I L Sbjct: 145 ANLGAVQLNYGFGVDDCRRAVEIAGADMLVLHLNGLQEIFQPEGNLDFSGLLQRIEELCR 204 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 + VP+ +KEVG G+ +G + D+AG GGTSWS++E R+ + Sbjct: 205 QLSVPVGVKEVGWGIDGETASRLYDAGAAFIDVAGAGGTSWSQVEKFRNPDPVRRAAAEA 264 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG T + R I SGGLR+GVD K++ LGA + G L A+ S Sbjct: 265 FADWGNSTADCIVEVRAVQPHGALIGSGGLRDGVDAAKALALGADMAGFGRSLLGSAVAS 324 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S+A+ A +E + E MF +G ++ L T L Sbjct: 325 SEALEARLEQVELELRTVMFGIGVDGIEGLKDTTRL 360 >gi|168490696|ref|ZP_02714839.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC0288-04] gi|183574814|gb|EDT95342.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae CDC0288-04] Length = 336 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLHTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVLGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|154248055|ref|YP_001419013.1| isopentenyl pyrophosphate isomerase [Xanthobacter autotrophicus Py2] gi|226707324|sp|A7IMW3|IDI2_XANP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154162140|gb|ABS69356.1| isopentenyl-diphosphate delta-isomerase, type 2 [Xanthobacter autotrophicus Py2] Length = 343 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 130/332 (39%), Positives = 183/332 (55%), Gaps = 5/332 (1%) Query: 5 RKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI+IV + R FD +H ALPE+ D +D S FLG+ L P LIS+ Sbjct: 9 RKEDHIDIVLAGGRVASRLDAGFDRVRFVHCALPELDLDAIDLSTRFLGRPLKAPFLISA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISN 122 MTGG + E IN +LA AA+ +A+ VGSQR+ D +A +LR+ AP L +N Sbjct: 69 MTGGPARA-ESINAHLAEAAQALGIALGVGSQRIAIEDGSAGGLGADLRRRAPDIALFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA QL G+ A +AV ++GAD L +HLNPLQE IQ G+ ++ + +I L ++ Sbjct: 128 LGAAQLLAARGLDAARRAVEMIGADVLVIHLNPLQEAIQQGGDRDWRGVFDRIGSLCVSL 187 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--IGIVFQD 240 P+++KEVG GLS G+ D+AG GGT+W+ +E R + F D Sbjct: 188 SAPVVVKEVGFGLSGAVARRLADCGVAALDVAGAGGTNWALVEGERGTGRSRAVATAFAD 247 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT ++ R C + IASGG+R+GVD K+I LGA L G A+ LK A+ S++A Sbjct: 248 WGIPTAQAVVEVRAACPDLPLIASGGVRHGVDAAKAIRLGADLVGQAAGTLKAAITSTEA 307 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 VV + + ++ F G + L Sbjct: 308 VVEHFSQMTDQLRIACFATGAADLDALRRVPL 339 >gi|149003486|ref|ZP_01828360.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS69] gi|237649352|ref|ZP_04523604.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CCRI 1974] gi|237821530|ref|ZP_04597375.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae CCRI 1974M2] gi|147758422|gb|EDK65421.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP14-BS69] Length = 336 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQMHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|322391510|ref|ZP_08064979.1| isopentenyl-diphosphate delta-isomerase [Streptococcus peroris ATCC 700780] gi|321145593|gb|EFX40985.1| isopentenyl-diphosphate delta-isomerase [Streptococcus peroris ATCC 700780] Length = 333 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 174/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + +E+D S EF G+K FP Sbjct: 1 MTTNRKDEHIRYALEQ---NSTYNSFDEVELIHSSLPLYNIEEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK + IN+ LA AE + GS D + SF ++ P +L Sbjct: 58 INAMTGGSNK-GKEINQKLAQVAEACGILFVTGSYSAALKDPS-DDSFAVKSNHPDLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S + + Sbjct: 116 TNIG-----LDKPVEFGLQTVKEMNPLLLQVHVNVMQELLMPEGERQFRLWQSNLKDYAE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VPL+LKEVG G+ I + GIR D++GRGGTS++ IE+ R + D D Sbjct: 171 QISVPLVLKEVGFGMDVKTIAKAYEMGIRTVDLSGRGGTSFAYIENRRSGQRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+ + ++ + + SGG+RN +DI+K ++ GA GL+ L+ S D Sbjct: 228 WGQSTMQALLNAQDWKDKMELLVSGGVRNPLDIIKCLVFGAKAVGLSRTMLELVENHSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + M L R+++L L+ + Sbjct: 288 EVITIVQGWKEDLRLIMCALNCVRIEDLQQVDYLLYGK 325 >gi|288560179|ref|YP_003423665.1| isopentenyl diphosphate delta-isomerase Fni [Methanobrevibacter ruminantium M1] gi|288542889|gb|ADC46773.1| isopentenyl diphosphate delta-isomerase Fni [Methanobrevibacter ruminantium M1] Length = 350 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 121/340 (35%), Positives = 192/340 (56%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M++DRK++H+ I D + F+D LIHRALPEI+ D++D S E GKKL PL Sbjct: 1 MISDRKLEHLLICKNYDVSYNDKTTGFEDIELIHRALPEINNDDIDLSTEVFGKKLDSPL 60 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 I+++TGG+ K + IN+ LAI AE + + +GSQR + ++++ R+ AP + Sbjct: 61 FITAITGGH-KAAKDINKELAIIAESRNIGLGLGSQRAAIVNPELRDTYDVVRENAPDAL 119 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 ++ N+GA Q A AV +L +D L +HLNPLQE IQP G+ + I + Sbjct: 120 ILGNIGAPQS------DLAIDAVEILDSDILAIHLNPLQESIQPEGDVDARGYVDSIKEI 173 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +DVP++ KE G G+ + D K+G+ + D+ G GGTSW+ +E++R + +G +F Sbjct: 174 CKTVDVPVMAKETGTGIRAEDAIELEKAGVSFIDVEGAGGTSWAAVETYRAEDRYLGELF 233 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI-LKSIILGASLGGLASPFLKPAMDS 297 DWGIPT +S E ++SGG+ L++I LGA G+A P LK A + Sbjct: 234 WDWGIPTAVSTVEV-VNSVEIPVVSSGGISFRTRCKLRAIALGADAVGMALPALKGAYEG 292 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+ + + ++MFLLG ++EL + +I+ + Sbjct: 293 QEALNQMVNRFNESLRIAMFLLGASNLEELKRSDLIIKGE 332 >gi|171778298|ref|ZP_02919504.1| hypothetical protein STRINF_00346 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282998|gb|EDT48422.1| hypothetical protein STRINF_00346 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 332 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +HI K FDD LIHR+LP+ E+D F G+ FP I Sbjct: 1 MMNRKDEHIKYALKY---QSPYNSFDDMELIHRSLPDYDLSEIDLHTHFAGRDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +NR LA A+ T + M GS + S+ + P +L + Sbjct: 58 NAMTGGSEKA-KAVNRKLAQVAQATGLVMVTGSYSAALKNP-GDDSYPSKADYPDLLLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D + + + + L +H+N +QE++ P G F +A ++ Sbjct: 116 NIG-----IDKPYELGLKTIEEMQPIFLQVHVNLMQELLMPEGEREFCSWKKHLADYATK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M VP++LKEVG G+ IE GI+ FDI+GRGGTS++ IE+ R DW Sbjct: 171 MPVPVILKEVGFGMDLKTIETAYDLGIKTFDISGRGGTSFAYIENQRGDNR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQSLLNAQSMVDKVEILASGGVRHPLDMVKCLVLGAKAVGLSRTVLELVEKYPVEK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I + + + M L K +++L L+ + Sbjct: 288 VIDIINGWKDDLRLIMCALNCKTIEDLKDVDYLLYGK 324 >gi|289168576|ref|YP_003446845.1| isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus mitis B6] gi|288908143|emb|CBJ22984.1| isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 [Streptococcus mitis B6] Length = 336 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP DE+D S EF G+K F Sbjct: 1 MTTNRKDEHIRYALEQ---KSSYNSFDEVELIHSSLPLYDLDEIDLSTEFAGQKWDFLFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K + IN+ LA A+ + GS D SF +R P+ +L Sbjct: 58 INAMTGGSDK-GKEINQKLAQVADACGILFVTGSYSAALKDP-TDDSFSVRSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F + S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPLLLQVHVNVMQELLMPEGERTFRNWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R FD++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYELGVRTFDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + + + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQDWKDRVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKDDLRLIMCALNCATIADLQKVDYLLYGK 325 >gi|298674296|ref|YP_003726046.1| isopentenyl-diphosphate delta-isomerase [Methanohalobium evestigatum Z-7303] gi|298287284|gb|ADI73250.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalobium evestigatum Z-7303] Length = 358 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 195/343 (56%), Gaps = 14/343 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+N P R K FDD LIHRALPE++ DE+D S FLGK S P + Sbjct: 3 TSRRKIEHLNFCAHSPVESRKKGSGFDDITLIHRALPEVNMDEIDLSTRFLGKDFSAPFM 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ I +NR LA A E+ V + VGSQR D +SF + R AP+ + Sbjct: 63 IASITGGHEDTI-PVNRALAKAVEEMGVGIGVGSQRAAIEDPAQEESFRVVRDEAPNAFI 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ ++GV+ + V ++ AD + +HLN LQE +QP G+ + + I+ ++ Sbjct: 122 YGNVGAAQIK-EYGVEVVEKLVDMIDADAMAVHLNFLQEAVQPEGDRDASGTLEAISEIT 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------ 233 S +++P++ KE G G+S D L +G+ D+ G GGTSWS +E +R + + Sbjct: 181 S-LNIPVIAKETGAGISHEDAVLLKNAGVSAIDVGGVGGTSWSGVEFYRAKDRNDLRSQL 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D GIPT L IA+GG+R+G+DI KS+ +GA + A PF++P Sbjct: 240 LGEIFWDHGIPTASDLIEC---DVSLPLIATGGIRSGLDIAKSVTMGADVASAALPFVEP 296 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ + V+ + + + VSMFL G K V +L A++ Sbjct: 297 ALKNEQEVINTLSNFIYQLKVSMFLCGCKTVSDLRDVPAVVTG 339 >gi|91205546|ref|YP_537901.1| isopentenyl pyrophosphate isomerase [Rickettsia bellii RML369-C] gi|122425613|sp|Q1RIK2|IDI2_RICBR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91069090|gb|ABE04812.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia bellii RML369-C] Length = 342 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 197/336 (58%), Gaps = 4/336 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI I F+ +H ALPEI++ +D + FL K L P+LISS Sbjct: 5 KRKQDHIEINLTKNVESGLSSGFESVQFVHNALPEINYSSIDTTTTFLNKILQAPILISS 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K +AM +GS R + ++ + + +F +R AP VL++N+ Sbjct: 65 MTGGTPRARD-INCRLAAAAQKAGIAMGLGSMRTLLTEPSTLDTFTVRNNAPDIVLLANI 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP G+ N+ +L KI + + + Sbjct: 124 GAVQLNYGVTPKQCQYLVDSVKADALILHLNVLQELTQPEGDKNWENLLPKIKEVVNYLS 183 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + + G++ D+AG GGTSWS++E++R L++ I F + Sbjct: 184 VPVIIKEVGFGLSKKTAKQFIDIGVKILDVAGSGGTSWSQVEAYRATNSLQNRIASSFIN 243 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + IASGGL++G+D K+I +GA + GLA PFLK A S + Sbjct: 244 WGIPTLDSLKMVREASKDISVIASGGLKSGIDGAKAIRMGADIFGLAGPFLKAADVSENL 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I+ + ++ ++M G++ + L + H Sbjct: 304 VSEEIQLIIEQLKITMMCTGSRTINNLKKAELRMNH 339 >gi|51473641|ref|YP_067398.1| isopentenyl pyrophosphate isomerase [Rickettsia typhi str. Wilmington] gi|81610792|sp|Q68WS6|IDI2_RICTY RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51459953|gb|AAU03916.1| IPP isomerase [Rickettsia typhi str. Wilmington] Length = 342 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 131/334 (39%), Positives = 197/334 (58%), Gaps = 4/334 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DHI I K K IH ALPEI++D +D + FLGK + P+LISS Sbjct: 10 ERKQDHIEINLKQNVNSTLKSGLASIKFIHNALPEINYDNIDTTTTFLGKYMKAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K+ +AM +GS R++ + + IK+F +R AP L++N+ Sbjct: 70 MTGGTTRA-KDINYRLAQAAQKSGIAMGLGSMRILLTKPDTIKTFTVRHVAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ + + AD L LHLN L E+ QP GN N+ +L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLIDTIKADALILHLNVLHELTQPEGNRNWENLLPKIKEVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVFQD 240 VP+++KEVG GLS + +K G++ DIAG GGTSWS++E++R S I F + Sbjct: 189 VPVIIKEVGYGLSKQVAKKLIKVGVKVLDIAGSGGTSWSQVEAYRAKNSMQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T SL+M R + IASGGL++G+D K+I +GA++ GLA LK A + Sbjct: 249 WGITTLDSLKMLREVSKDITLIASGGLQSGIDGAKAIRMGANIFGLAGQLLKAADIAESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V I+ + ++ ++M G+ +++L ++ Sbjct: 309 VSEEIQLIIEQLKITMLCTGSCTLKDLAKAEIML 342 >gi|325693778|gb|EGD35697.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK150] Length = 335 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLKPLFLQVHVNLMQELLMPEGEREFRSWLQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL + +P +E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLVLQPLRDEVELLASGGVRHPLDMVKALVLGAKAVGLSRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|251798440|ref|YP_003013171.1| isopentenyl pyrophosphate isomerase [Paenibacillus sp. JDR-2] gi|247546066|gb|ACT03085.1| isopentenyl-diphosphate delta-isomerase, type 2 [Paenibacillus sp. JDR-2] Length = 356 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 130/342 (38%), Positives = 184/342 (53%), Gaps = 10/342 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +HI I ++ + FD + H ALPEI+FD++ E+LG+++ PLL Sbjct: 13 TSKRKSEHIRICLQENVAGEGIETGFDQFRFRHNALPEIAFDDIRLDTEWLGRRMRTPLL 72 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 +SSMTGG N+ INR LA AAE A+ +GS R SF +R AP +I Sbjct: 73 VSSMTGGTNEA-GAINRRLAEAAETRGWAIGLGSMRAAIEQEELAASFYIRDIAPSVPVI 131 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +GV +AV + AD L LHLN +QE+ QP G+TNF L +I + Sbjct: 132 ANLGAVQLNYGYGVDACRKAVEIAEADALVLHLNSMQEVFQPEGDTNFRSLLPRIGEVCR 191 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 A+ VP+ +KEVG G+ + +G + D+AG GGTSWS++E +R + Sbjct: 192 ALSVPVGIKEVGWGIDADTAAALASAGAAFIDVAGAGGTSWSQVEKYRQNDPMRRLAAEA 251 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT S+ + IASGGL++GVD KSI LGA + G L A + Sbjct: 252 FAGWGIPTAESVREVKSRLPNTTVIASGGLQHGVDAAKSIALGADIAGFGRALLPRAANG 311 Query: 298 S-----DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + ++ E + E +MF +G + +L T LI Sbjct: 312 ETRVSVEQLIEQFERIEFELRAAMFGIGAAAISDLQHTTRLI 353 >gi|289581614|ref|YP_003480080.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natrialba magadii ATCC 43099] gi|289531167|gb|ADD05518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natrialba magadii ATCC 43099] Length = 372 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 134/345 (38%), Positives = 202/345 (58%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +DRK DHI I ++ ++ F D L+H ALPEI DE+D ++E G +L+ P++I Sbjct: 21 TSDRKDDHIRI-IEEEDVETAGTGFADIDLVHEALPEIHRDEIDTTIELFGHELAAPIVI 79 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTV 118 SMTGG+ +INR LA AA++ +AM VGSQR D + ++S+ + R AP Sbjct: 80 ESMTGGHPNTT-KINRALAEAAQEMNIAMGVGSQRAGIELDDEDLLESYTVVRDVAPDAF 138 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L N+GA QL ++ V+ AV ++ AD + +HLN LQE +QP G+ + ++I + Sbjct: 139 LYGNVGAAQL-LEYDVEDVEAAVEMIDADAMAIHLNFLQEAVQPEGDIDARGCLAEIGHV 197 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 +S + VP+++KE G G+S +G+ D+AG+GGT+WS IES+R + Sbjct: 198 ASDLSVPVVVKETGNGISRETASRLTDAGVDAIDVAGQGGTTWSGIESYRAAAVGASRQE 257 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 IG +F+ WG+PT +S + + IASGG+R+G+DI K+I LGA GGLA PFL Sbjct: 258 KIGQLFRAWGVPTAVSTLESAAVHD--CVIASGGVRSGLDIAKAIALGARAGGLAKPFLG 315 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA +DAVV IE L E +MF+ G+ V +L ++ + Sbjct: 316 PAGQGTDAVVDLIEQLELELRTAMFVTGSASVADLQEAEYVVGGR 360 >gi|291294796|ref|YP_003506194.1| isopentenyl-diphosphate delta-isomerase type 2 [Meiothermus ruber DSM 1279] gi|290469755|gb|ADD27174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus ruber DSM 1279] Length = 340 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 2/326 (0%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK H+ + ++P R F+ + L +RALPE++ +EVD + FLGK L P L Sbjct: 7 IQTRKRKHLEVCLREPVAYTRLTTGFERYRLRYRALPELALEEVDLTTRFLGKTLRAPFL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG RINR LA AAE+ V M +GSQRVM A SF++R AP+T+L+ Sbjct: 67 IGAMTGG-EAHGGRINRALAQAAEQLGVGMMLGSQRVMLEHPQARASFQVRAVAPNTLLV 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQLN +G++ QAV ++ AD L LH+NPLQE +Q G+T+F L K+ L Sbjct: 126 GNLGLVQLNKGYGLEHLEQAVKLVQADALALHINPLQEALQVGGDTDFRGLLDKLRGLLP 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P++LKEVG G+ + D+AG GGTSW+R+E + + Sbjct: 186 QLPFPVVLKEVGHGIGREIAQQLAPLPFAALDVAGAGGTSWARVEELVHHGRILHPELVE 245 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 GIPT +L R IASGG+RNG + K++ LGA + +A P L+PA+ +A Sbjct: 246 VGIPTAQALVECRSVLPHQPLIASGGIRNGTEAAKALALGAQVVAVARPLLEPALQGPEA 305 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 VVA I++ E V++F +G + E Sbjct: 306 VVAWIKNFLHELRVALFAIGARTPAE 331 >gi|148656559|ref|YP_001276764.1| isopentenyl pyrophosphate isomerase [Roseiflexus sp. RS-1] gi|148568669|gb|ABQ90814.1| isopentenyl-diphosphate delta-isomerase, type 2 [Roseiflexus sp. RS-1] Length = 345 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 137/334 (41%), Positives = 191/334 (57%), Gaps = 7/334 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+DH+ IV +D F + L H A PE+ E+D SV FLGK++ PLL Sbjct: 7 TSSRKLDHVRIVLGEDVAAKGVTTGFAAYRLPHEAAPELDLAEIDTSVTFLGKRMRAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + RIN LA AAE +AM VGSQR D ++ +R AP L+ Sbjct: 67 ISSMTGGARDVA-RINVALAEAAEALGLAMGVGSQRAALVDPRLADTYRVRHVAPTIPLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY FGV + +AV ++ AD L LH N LQE +QP GNTNF L +I + Sbjct: 126 ANLGAVQLNYGFGVDECRRAVDMIEADALVLHFNALQEAVQPEGNTNFKGLLRRIEEVCL 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 +DVP++ KEVG G+ + + +G++ D+AG GGTSWS +E +R + + Sbjct: 186 RLDVPVIAKEVGNGIGAATARRLVDAGVKIIDVAGAGGTSWSEVERYRHTTGRGAQVAGA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F WGIPT ++ R + I SGG+R+GVD+ K+I LGA L A P L PA+D Sbjct: 246 FAGWGIPTTEAIRQVRAALPDITIIGSGGVRSGVDVAKAIALGADLAATARPALIPAVDE 305 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + AV+ ++++ E ++MF G + L Sbjct: 306 RGAVAVIESLQTYIDELRIAMFCTGCGDLTALRR 339 >gi|332202290|gb|EGJ16359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae GA41317] Length = 336 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++GRGGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIVDLQKVDYLLYGK 325 >gi|15604317|ref|NP_220833.1| isopentenyl pyrophosphate isomerase [Rickettsia prowazekii str. Madrid E] gi|13878570|sp|Q9ZD90|IDI2_RICPR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|3861009|emb|CAA14909.1| unknown [Rickettsia prowazekii] gi|292572067|gb|ADE29982.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia prowazekii Rp22] Length = 342 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 129/330 (39%), Positives = 198/330 (60%), Gaps = 4/330 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI I K K + IH ALPEI++D +D + FLGK + P+LISS Sbjct: 10 ERKQEHIEINLKQNVNSTLKSGLESIKFIHNALPEINYDSIDTTTTFLGKDMKAPILISS 69 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K+ +AM +GS R++ + + IK+F +R AP L++N+ Sbjct: 70 MTGGTARARD-INYRLAQAAQKSGIAMGLGSMRILLTKPDTIKTFTVRHVAPDIPLLANI 128 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ + + AD L LHLN L E+ QP GN N+ +L KI + + + Sbjct: 129 GAVQLNYGVTPKECQYLIDTIKADALILHLNVLHELTQPEGNKNWENLLPKIKEVINYLS 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIVFQD 240 VP+++KEVG GLS + +K+G++ DIAG GGTSWS++E++R S I F + Sbjct: 189 VPVIVKEVGYGLSKQVAKKLIKAGVKVLDIAGSGGTSWSQVEAYRAKNSMQNRIASSFIN 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGI T SL+M + + IASGGL++G+D K+I +GA++ GLA LK A + Sbjct: 249 WGITTLDSLKMLQEISKDITIIASGGLQSGIDGAKAIRMGANIFGLAGKLLKAADIAESL 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V+ I+ + ++ ++M G+ +++L Sbjct: 309 VLEEIQVIIEQLKITMLCTGSCTLKDLAKA 338 >gi|1723373|sp|Q01335|IDI2_ESCVU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148409|gb|AAA64978.1| unknown [Pantoea agglomerans] Length = 347 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 6/333 (1%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV + + F+ W H ALPE++F ++ FL ++L PLLIS Sbjct: 8 QRKNDHLDIVLDPRRAVTQASAGFERWRFTHCALPELNFSDITLETTFLNRQLQAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTVLIS 121 SMTGG + INR+LA AA+ K+AM VGSQRV D LRQ AP L++ Sbjct: 68 SMTGGVERSRH-INRHLAEAAQVLKIAMGVGSQRVAIESDAGLGLDKTLRQLAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA QL G+ A +AV ++ AD L +HLNPLQE +QP G+ ++ + I L Sbjct: 127 NLGAAQLTGRKGIDYARRAVEMIEADALIVHLNPLQEALQPGGDRDWRGRLAAIETLVRE 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VPL++KEVG G+S + +G+ D+AG GGTSW+ +E R + + + VF Sbjct: 187 LPVPLVVKEVGAGISRTVAGQLIDAGVTVIDVAGAGGTSWAAVEGERAATEQQRSVANVF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG++NGVD K++ LGA + G A+ L A S+ Sbjct: 247 ADWGIPTAEALVDIAEAWPQMPLIASGGIKNGVDAAKALRLGACMVGQAAAVLGSAGVST 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + V+ + ++ V+ F G++ + +L Sbjct: 307 EKVIDHFNVIIEQLRVACFCTGSRSLSDLKQAD 339 >gi|108803250|ref|YP_643187.1| isopentenyl pyrophosphate isomerase [Rubrobacter xylanophilus DSM 9941] gi|108764493|gb|ABG03375.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Rubrobacter xylanophilus DSM 9941] Length = 351 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 122/329 (37%), Positives = 187/329 (56%), Gaps = 3/329 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +HI I ++ F+ + + + +LPE+ VD S LG++LS P + Sbjct: 14 TARRKKEHIRICLEEDVDHPVLTTGFERYRVPYASLPELDLAAVDLSCGMLGRRLSMPFM 73 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I SMTGG ++ INRNLA AA++ +VA+ +GS R+ D A +SF +R+ P L Sbjct: 74 ILSMTGGA-RLSRTINRNLARAAQECRVALGLGSMRIALEDPAAAESFRVRELCPDVPLW 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QLN FGV++ + V + GADGL LHLN LQE QP G+T+++ ++ K+A ++ Sbjct: 133 ANLGAAQLNRGFGVEECRRVVEISGADGLCLHLNALQEAAQPGGDTDWSGIAEKLAAVAG 192 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KEVG G+ + + D+ G GGTSW +E R D F Sbjct: 193 ELGVPVIVKEVGFGIGPRTARMLGGLPVWGVDVGGAGGTSWLEVEK-RAWGRDDLDAFDA 251 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +G PT S+ + R +C + I SGG+R GVD +K++ LGA + G A P L+PA +S +A Sbjct: 252 FGTPTAESISVVRKHCPDKLVIGSGGVRTGVDAVKALALGADMVGAARPLLRPATESEEA 311 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYL 329 V+ + R+E ++ F G + L Sbjct: 312 VIRWLRRFREEMRLAAFCAGAPDLNALRE 340 >gi|308235869|ref|ZP_07666606.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis ATCC 14018] gi|311115035|ref|YP_003986256.1| putative isopentenyl-diphosphate delta-isomerase [Gardnerella vaginalis ATCC 14019] gi|310946529|gb|ADP39233.1| possible isopentenyl-diphosphate delta-isomerase [Gardnerella vaginalis ATCC 14019] Length = 829 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 114/356 (32%), Positives = 182/356 (51%), Gaps = 29/356 (8%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLG--KKLSFP 58 ++ RK DHI + C+ F+ I ALP+++ +VD SV K P Sbjct: 473 LIEQRKDDHIKLACEQYDA-HADAGFEHVRFIPNALPQLALSDVDTSVSVFDESTKWDTP 531 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 L I++MTGG+ K E IN +LA A KT +AMA GS + ++F + R++ P Sbjct: 532 LYINAMTGGS-KKGENINESLARVAAKTGLAMASGSLSAALKNPRLAETFSVIRRFNPQG 590 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +++N+ A ++A +AV +L A+ L +HLN QE++ G+ +F+ + I Sbjct: 591 FVMANVSA-----GASAEQAIKAVEILQANALQIHLNAAQELVMSEGDRDFSAWLNNIET 645 Query: 178 LSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + SA+D VP+++KE GCG+S+ D+ G+R D+ GRGGT++ IE+ R Sbjct: 646 IVSALDSMKVPVVVKETGCGMSAHDVLRLKNVGVRAVDVGGRGGTNFVAIENARRGRKSD 705 Query: 235 GIVFQDWGIPTPLSLEMARP---------------YCNEAQFIASGGLRNGVDILKSIIL 279 WG+ T SL Q ASGG+R +D+++S+ L Sbjct: 706 YEFLDSWGLTTVESLLDIAQCDEILCEPRDSSDSCNSARMQVFASGGVRTPLDVVRSLRL 765 Query: 280 GASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 GAS G+A FL + + DA+V IES + + V M LLG K +++L N+ ++ Sbjct: 766 GASAVGVAGEFLHTLINEGEDALVEQIESWKAQIRVIMALLGCKNIEDLRENSRIL 821 >gi|282164307|ref|YP_003356692.1| isopentenyl-diphosphate delta-isomerase [Methanocella paludicola SANAE] gi|282156621|dbj|BAI61709.1| isopentenyl-diphosphate delta-isomerase [Methanocella paludicola SANAE] Length = 357 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 124/343 (36%), Positives = 196/343 (57%), Gaps = 13/343 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+H++I ++ ++ D +HR LPEI+ +VD FLG K S PL+I Sbjct: 3 TSKRKIEHLDICTRE-NVESKDNGLSDVEFVHRCLPEINRADVDSRTTFLGHKFSAPLMI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +SMTGG+ E +N NLA+AAE+ + + VGSQR D S+ +R+ AP+ + Sbjct: 62 ASMTGGHPGTTE-VNANLAMAAEQLGLGLGVGSQRAALEDRKLEDSYRIVREKAPNAFIY 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GA QL D+ + +AV ++ AD + +HLN LQE IQP GN + + KIA +++ Sbjct: 121 GNIGAPQLA-DYTIDDVERAVEMIDADAMAIHLNFLQEAIQPEGNVDARGIIEKIAGIAA 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 + VP+++KE G G+ MD L K+G+ D+ GRGGTSW+ +E R ++ + Sbjct: 180 ELSVPVIVKETGAGICHMDAYLLKKAGVAAIDVGGRGGTSWAGVEVFRARMELDEVSEHL 239 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G+ F DWGIPT +SL A +A+GG+R+GV + K++ LGAS+ +A P + A Sbjct: 240 GMKFWDWGIPTAVSLVEA---DIGLPLVATGGIRDGVMMAKAMALGASMSSVALPLVSAA 296 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V +E +E MFL G++ V+++ +I + Sbjct: 297 RIGPEKVKKMLELYIEELKAVMFLTGSRSVEDIRRAPVIISGK 339 >gi|157827262|ref|YP_001496326.1| isopentenyl pyrophosphate isomerase [Rickettsia bellii OSU 85-389] gi|166226206|sp|A8GWR2|IDI2_RICB8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157802566|gb|ABV79289.1| Isopentenyl-diphosphate delta-isomerase [Rickettsia bellii OSU 85-389] Length = 343 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 196/336 (58%), Gaps = 4/336 (1%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK DHI I F+ +H ALPEI++ +D + FL K L P+LISS Sbjct: 5 KRKQDHIEINLTKNVESGLSSGFESVQFVHNALPEINYSSIDTTTTFLNKILQAPILISS 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN LA AA+K +AM +GS R + ++ + + +F +R AP VL++N+ Sbjct: 65 MTGGTPRARD-INCRLAAAAQKAGIAMGLGSMRTLLTEPSTLDTFTVRNNAPDIVLLANI 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQLNY ++ V + AD L LHLN LQE+ QP G+ N+ +L KI + + + Sbjct: 124 GAVQLNYGVTPKQCQYLVDSVKADALILHLNVLQELTQPEGDKNWENLLPKIKEVVNYLS 183 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQD 240 VP+++KEVG GLS + + G++ D+AG GGTSWS++E++R L++ I F + Sbjct: 184 VPVIIKEVGFGLSKKTAKQFIDIGVKILDVAGSGGTSWSQVEAYRATNSLQNRIASSFIN 243 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT SL+M R + IASGGL++G+D K+I +GA + GLA PFLK A S + Sbjct: 244 WGIPTLDSLKMVREASKDISVIASGGLKSGIDGAKAIRMGADIFGLAGPFLKAADVSENL 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I+ + ++ ++M G+ + L + H Sbjct: 304 VSEEIQLIIEQLKITMMCTGSHTINNLKKAELRMNH 339 >gi|332968012|gb|EGK07099.1| isopentenyl-diphosphate delta-isomerase [Desmospora sp. 8437] Length = 347 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 183/337 (54%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK +HI IV F+ + +H+ALPE + ++ + FLGK L P L Sbjct: 8 TEKRKSEHIEIVLNRKVSGSGITTGFEKYRFVHQALPETRYTDISLATNFLGKSLKVPFL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG +K +IN+NLA AA+ AM +GS R + +F +R+ AP ++ Sbjct: 68 ISSMTGGTDKAA-KINQNLAAAAQARGWAMGLGSVRAAIEHPDTAATFNVRKVAPTIPIL 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +GV QAV + ADGL HLN LQE+ QP GNT+F +L K+ L S Sbjct: 127 ANLGAVQLNYGYGVDHCRQAVELSEADGLVFHLNSLQEVFQPEGNTDFRNLLRKLEDLCS 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 ++VP+ +KEVG G+ G+ + D+AG GGTSWS++E +R Sbjct: 187 VLEVPVGVKEVGWGIDGESARRLFDVGVDFVDVAGAGGTSWSQVEKYRSENPLLFQAAEA 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD- 296 F+ WG PT + R E IASGGL NGVD K+I LGA L G LK A Sbjct: 247 FESWGHPTSECIREGRALNPEGTLIASGGLNNGVDGAKAIALGADLAGYGRSLLKAATAP 306 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + DA+ + +E + E ++MF G R++ L + Sbjct: 307 TPDAIASQLERIETECRIAMFGTGIDRIEALKGTERI 343 >gi|307595534|ref|YP_003901851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta distributa DSM 14429] gi|307550735|gb|ADN50800.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta distributa DSM 14429] Length = 358 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 184/338 (54%), Gaps = 8/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK DHI I ++ F++ LIH ALPEI D+VD S+ K+LSFP + Sbjct: 1 MIESRKDDHIRIA-SGQNVEEGNNLFNEVQLIHMALPEIDLDDVDTSITIFNKRLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR-QYAPHTVL 119 I +MTGG E+IN LA AE+ + M VGSQRV +SF + + AP + Sbjct: 60 IGAMTGGTE-TAEKINTILAKCAEEYGIGMYVGSQRVAIVKPETARSFRVVAENAPTALK 118 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q L+ QA+ ++ AD + +HLNP QE+ QP G F + K+ Sbjct: 119 IANLGAPQVSRLDEKVLSDWVSQAIDMINADAIAIHLNPAQEVFQPEGEPWFRGVIDKLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + + PL++KEVG G+S + + K G D+AG GGTS+ RIES R +D Sbjct: 179 FIKRVANRPLIVKEVGNGISMEVAKALVSKVGPDAIDVAGTGGTSFIRIESIRAGTTDEA 238 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 VF WGIPT +S+ R N IASGG+R+G+D K+I +GA+ ++ P L A+ Sbjct: 239 DVFSGWGIPTAISICEVRSVYNGV-IIASGGIRSGLDGAKAIAIGANAFSMSRPLLLAAL 297 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 D I L +EF ++MFL G++ V EL + Sbjct: 298 KGYDEAKRFIGKLLREFKIAMFLTGSRSVDELGKAPIV 335 >gi|291484713|dbj|BAI85788.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. natto BEST195] Length = 349 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 185/337 (54%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I+ Sbjct: 4 AERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K+ IN++LA AA + + +AVGSQ D + S+E +R+ P+ ++ + Sbjct: 62 AMTGGGGKLTYEINKSLARAAYQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S Sbjct: 122 NLGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALERIEQICSH 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++G DI G GGT++S+IE+ R F W Sbjct: 177 VSVPVIVKEVGFGMSKESAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRK--ISFFNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T SL R + IASGGL++ +D+ K+I LGAS G+A FLK D + Sbjct: 235 GISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I+ + +E + M +LG + + +L +I+ + Sbjct: 295 LLEEIQLILEELKMIMTVLGARTIDDLQKAPLVIKGE 331 >gi|262281878|ref|ZP_06059647.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. 2_1_36FAA] gi|262262332|gb|EEY81029.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sp. 2_1_36FAA] Length = 334 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 1 MSQNRKDDHIKYALEQRL---GYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K +IN LA AE + GS + + S+ + P+ +L Sbjct: 58 INAMTGGSHK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DSSYRVAAGRPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYSQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 171 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P C+E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 228 WGQSTLQSLLALQPLCDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A +E + + + M L + +QEL L+ + Sbjct: 288 EVIAIVEGWKSDLRLIMCALSCRNLQELKNVPYLLYGR 325 >gi|260599332|ref|YP_003211903.1| isopentenyl pyrophosphate isomerase [Cronobacter turicensis z3032] gi|260218509|emb|CBA33695.1| Isopentenyl-diphosphate delta-isomerase [Cronobacter turicensis z3032] Length = 347 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 125/337 (37%), Positives = 191/337 (56%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE+S D++D S G+ + PLL Sbjct: 6 LSQRKNDHLDIVLHPERAKQTVRTGFEQWRFEHCALPELSLDDIDLSTRLFGRAMKAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV + + ELRQYAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRQYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVDMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIERVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R ++ + Sbjct: 185 NALPVPVVVKEVGAGLSVPVARQLKEAGVAMLDVAGAGGTSWAAVEGERAASTHARNVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GA+L G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDAAKALAMGATLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S+ AV+ + ++ V+ F G+ + L + Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASLSALREARLV 341 >gi|16330973|ref|NP_441701.1| isopentenyl pyrophosphate isomerase [Synechocystis sp. PCC 6803] gi|2829616|sp|P74287|IDI2_SYNY3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1653467|dbj|BAA18381.1| sll1556 [Synechocystis sp. PCC 6803] Length = 349 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 125/335 (37%), Positives = 194/335 (57%), Gaps = 5/335 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK DHI IV ++ + + F+ L H ALP + D VD + GK L++P L Sbjct: 4 TPHRKSDHIRIVLEEDVVGKGISTGFERLMLEHCALPAVDLDAVDLGLTLWGKSLTYPWL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + ++IN LA A+ +AM +GSQR + + ++++R AP +L Sbjct: 64 ISSMTGGTPEA-KQINLFLAEVAQALGIAMGLGSQRAAIENPDLAFTYQVRSVAPDILLF 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG VQLNY +G+++A +AV ++ AD L LHLNPLQE +QP+G+ ++ L SK+ L Sbjct: 123 ANLGLVQLNYGYGLEQAQRAVDMIEADALILHLNPLQEAVQPDGDRLWSGLWSKLEALVE 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGIV 237 A++VP+++KEVG G+S + + G+ D+AG GGTSWS +E+HR + ++ Sbjct: 183 ALEVPVIVKEVGNGISGPVAKRLQECGVGAIDVAGAGGTSWSEVEAHRQTDRQAKEVAHN 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT SL+ + ASGG+R+G+D K+I LGA+L G A+P L A + Sbjct: 243 FADWGLPTAWSLQQVVQNTEQILVFASGGIRSGIDGAKAIALGATLVGSAAPVLAEAKIN 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + V ++ +E ++ F + +L Sbjct: 303 AQRVYDHYQARLRELQIAAFCCDAANLTQLAQVPL 337 >gi|157151022|ref|YP_001449561.1| isopentenyl pyrophosphate isomerase [Streptococcus gordonii str. Challis substr. CH1] gi|189044246|sp|A8AUV1|IDI2_STRGC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157075816|gb|ABV10499.1| FMN-dependent dehydrogenase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 334 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 1 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+++ P+ +L Sbjct: 58 INAMTGGSQKGS-QINEKLAQVAESCGLLFVTGSYSAALKNPSDT-SYQVATGRPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 116 TNIG-----LDKPYQAAQQAVADLQPLFLQIHVNLMQELLMPEGEREFRSWRQHLTDYSQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 171 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 228 WGQSTLQSLLALQPMRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRAMLDLVKNYSVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 288 EVIDIVEGWKSDLRLIMCALSCRNLQELKNVPYLLYGR 325 >gi|194397821|ref|YP_002037064.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae G54] gi|194357488|gb|ACF55936.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae G54] Length = 336 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFSGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAETCGILFVTGSYSAALKNP-TDDSFSVKSSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGFQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP++LKEVG G+ + IE + G+R D++G GGTS++ IE+ R + D Sbjct: 171 QIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGXGGTSFAYIENRRSGQRD---YLNQ 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + + SGG+RN +D++K ++ GA GL+ L+ + + Sbjct: 228 WGQXTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ + + + M L + +L L+ + Sbjct: 288 EVIGIVQGWKADLRLIMCSLNCATIADLQKVDYLLYGK 325 >gi|124485506|ref|YP_001030122.1| isopentenyl pyrophosphate isomerase [Methanocorpusculum labreanum Z] gi|124363047|gb|ABN06855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocorpusculum labreanum Z] Length = 355 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 186/343 (54%), Gaps = 14/343 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ + + + F+D L+H ALPE D +D SV+FLG+ LS PL I Sbjct: 7 TSSRKLDHLRLC-SETDVTAGSAGFEDIILVHNALPECDLDRIDLSVDFLGRNLSSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ E +NR L AAEK +AM VGSQR + SF + R APH L Sbjct: 66 SAMTGGHPDTAE-VNRVLGSAAEKYGLAMGVGSQRAALENPELADSFSVVRDAAPHAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQL G++ AV ++ AD L +HLN LQE +QP G+ + I+ Sbjct: 125 GNIGAVQLA-SHGMEWVDAAVDMIDADALCIHLNFLQEAVQPEGDHDATSCLDAISTACK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------- 233 +VP+++KE GCG+SS +G+ D G GGTSW++IE R + D Sbjct: 184 EANVPIIVKETGCGISSEVAARLFDAGVSAIDTGGYGGTSWAKIEGARAQKRDAAGDKAL 243 Query: 234 --IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G WGIPT +S+ + IA+GGL+ G+DI K I+LGA+LGG+A L Sbjct: 244 AGLGNSLHTWGIPTTVSVFEVAKVS-KGPVIATGGLKTGLDIAKGIVLGATLGGMALSLL 302 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 PA+ + + +AI+ + E SMFL G + + L + Sbjct: 303 SPALSGEETLGSAIDKIHTELRASMFLCGAQDIASLAKVRYYL 345 >gi|332358636|gb|EGJ36460.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1056] Length = 335 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+++ P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DSSYQVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +ES + + + M L + +QEL L+ + Sbjct: 289 EVIDIVESWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|297565922|ref|YP_003684894.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus silvanus DSM 9946] gi|296850371|gb|ADH63386.1| isopentenyl-diphosphate delta-isomerase, type 2 [Meiothermus silvanus DSM 9946] Length = 338 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 133/326 (40%), Positives = 191/326 (58%), Gaps = 3/326 (0%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + P R + + L +RALPE++ +EVD S EFLGKKL P L Sbjct: 5 IPERKRKHLEVCLSFPVEFARMSTGLERYRLRYRALPELALEEVDLSTEFLGKKLRAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG K RINR LA AAE+ V M +GSQRVM + A+ SF++R+ AP +L+ Sbjct: 65 IGAMTGGEEK-GGRINRALAQAAERLGVGMMLGSQRVMLENPQALPSFQVREVAPSALLV 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQLN +G QA+ ++GAD L LH NPLQE Q +G+T+F+ L K+ + Sbjct: 124 GNLGLVQLNKGYGPGHLEQALSLVGADALALHTNPLQEAAQ-HGDTDFSGLLGKLEAILP 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D P+LLKEVG G+ + I D+AG GGTSW+++E + + + Sbjct: 183 RLDFPVLLKEVGHGIGREVAQQLQGLPITALDVAGAGGTSWAKVEQYVRYGRVLHPELVE 242 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L R +ASGG+R+G D K++ LGA + +A P L+PA++ +A Sbjct: 243 MGLPTAQALTECREVLPRLPLVASGGIRSGSDAAKALALGARVVAVARPLLRPALEGPEA 302 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 V A IE E V++F LG +R +E Sbjct: 303 VAAWIEDFLWELRVALFALGARRPEE 328 >gi|313890605|ref|ZP_07824233.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121122|gb|EFR44233.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 341 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 170/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ +E+D S + G+ ++P I Sbjct: 1 MTNRKNDHIKYALKY---QSSYNSFDDIELIHCSLPQYDLEEIDLSTHYAGQDFAYPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA AE T + M GS + N +S++LR AP+ +L + Sbjct: 58 NAMTGGSEK-GKAVNEKLAQVAEATGIPMVTGSYSAALKNPN-DQSYQLRSIAPNLLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F + + Sbjct: 116 NIG-----LDKNVNLGLQTVREMNPIFLQVHINLMQELLMPEGERQFRSWRQHLKDYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I L GI+ FDI+GRGGTS++ IE+ R +W Sbjct: 171 IPVPIILKEVGFGMDLKTINLARDLGIQTFDISGRGGTSFAYIENQRGGHK---AYLDNW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L + ++ + +ASGG+RN +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTGQCLLNCQAISDDVEILASGGVRNPLDMIKCLVLGAKAVGLSRTVLELVESYPLEE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A I ++E + M L + + EL + + Sbjct: 288 VIAIINGWKEELRLIMCALDCRTIAELKSVDYYLYGR 324 >gi|71903330|ref|YP_280133.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS6180] gi|71802425|gb|AAX71778.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS6180] Length = 359 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 354 >gi|76800834|ref|YP_325842.1| isopentenyl pyrophosphate isomerase [Natronomonas pharaonis DSM 2160] gi|91207074|sp|Q3IUB0|IDI2_NATPD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|76556699|emb|CAI48271.1| isopentenyl-diphosphate delta-isomerase II 1 [Natronomonas pharaonis DSM 2160] Length = 358 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 199/342 (58%), Gaps = 14/342 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DH+ I+ ++ ++ D L+H ALP++ +D++D S+ FLG +L P++I Sbjct: 9 TEDRKDDHVRII-REEDVESGGTGLGDVRLVHEALPDVHYDDIDTSIPFLGAELDAPIVI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTV 118 SMTGG+ + INR LA AA +T +AM VGSQR D ++S+ + R+ AP Sbjct: 68 ESMTGGHANTTD-INRALAAAAAETGIAMGVGSQRAGLELDDEGVLESYTVVREAAPDAF 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + I + Sbjct: 127 LYGNLGAAQLK-EYDLETVERAVEMIDADALAVHLNFLQEAVQPEGDVDARGCLPAIERV 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 + VP+++KE G G ++ +G+ D+AG+GGT+WS +E++R + Sbjct: 186 VDGLSVPVVVKETGNGFAAETARRLADAGVDAIDVAGKGGTTWSGVEAYRAAAVGASRQE 245 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G +F++WG+PT +S + +ASGG+R G+D+ K+I LGA GGLA PFL+ Sbjct: 246 RVGELFREWGVPTAVSTLECAAEHD--CVVASGGVRTGLDVAKAIALGARAGGLAKPFLE 303 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 PA ++AVV IE L+ E +MF+ G+ V +L ++ Sbjct: 304 PAASGTEAVVERIEDLKTELRTAMFVTGSPTVADLQETDYVL 345 >gi|50914048|ref|YP_060020.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10394] gi|50903122|gb|AAT86837.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10394] Length = 359 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 354 >gi|322495776|emb|CBZ31082.1| isopentenyl-diphosphate delta-isomerase,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 356 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 133/339 (39%), Positives = 205/339 (60%), Gaps = 8/339 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 V +RK DHI+I KD + ++ + L ++ALPE+ +++ S EF+GK++SFP Sbjct: 14 VQNRKKDHIDICLHKDVEPHKRHTIWNKYTLPYKALPEVDLQKIETSCEFMGKRISFPFF 73 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P ++ Sbjct: 74 ISSMTGG-EAHGRVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVPML 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G VQLNY FG ++ + V + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 133 ANIGLVQLNYGFGPKEVNNLVDSVHADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQLLP 192 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIGI 236 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE HR E +IG Sbjct: 193 HIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGHRQPYKAEEENIGY 252 Query: 237 VFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +F+D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL A Sbjct: 253 LFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGLDVAKALMMGAEYATAAMPFLAAA 312 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++SS+AV A I+ +R+E VSMF G + ++EL + Sbjct: 313 LESSEAVRAVIQRIRQELRVSMFTCGARNIEELRRMKVI 351 >gi|224477332|ref|YP_002634938.1| isopentenyl pyrophosphate isomerase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421939|emb|CAL28753.1| putative isopentenyl diphosphate isomerase [Staphylococcus carnosus subsp. carnosus TM300] Length = 380 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 107/335 (31%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ I D FD +H ++P I D+VD SV +S PL I+ Sbjct: 41 EQRKDDHVKIAMAQN--DPQLTDFDKVRFVHHSIPSIDVDQVDLSVNLPDFSMSSPLYIN 98 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ ++IN LA+ A +T +A+AVGS +H SF+ +R+ P ++ S Sbjct: 99 AMTGGSE-WTKQINEKLAVVARETGLAIAVGSTHAALRNHKMASSFDIVRKTNPDGIIFS 157 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D A Q+V +L A+ L +H+N QE++ P GN F++ ++ + Sbjct: 158 NVGA-----DVPADLAKQSVEMLQANALQVHVNSPQELVMPEGNRTFSNWMENLSEIVQT 212 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S I+ + GIRY D++GRGGT++ IE+ R D+ Q+W Sbjct: 213 VNVPVIVKEVGFGMSRELIQDLKEIGIRYVDVSGRGGTNFVNIENERRQLKDMS-YLQNW 271 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T SL ++ N+ ASGG+RN +D +K + LGA G++ PFL+ + Sbjct: 272 GQSTVESLLESKNLQNQVTVFASGGVRNPLDAIKCLALGAEAVGMSRPFLEQVENNGITQ 331 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V +E ++ ++ + ++ L+ ++ Sbjct: 332 TVEFVEEFIEQMKKIAVMVNAQNIEALHQTEVVLD 366 >gi|15674904|ref|NP_269078.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes M1 GAS] gi|19745947|ref|NP_607083.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS8232] gi|21910134|ref|NP_664402.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS315] gi|28896167|ref|NP_802517.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes SSI-1] gi|71910498|ref|YP_282048.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS5005] gi|54037384|sp|P65104|IDI2_STRP3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54037385|sp|P65105|IDI2_STRP8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54041382|sp|P65103|IDI2_STRP1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|73920025|sp|Q5XCM6|IDI2_STRP6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91207079|sp|Q48U28|IDI2_STRPM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|13622044|gb|AAK33799.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19748105|gb|AAL97582.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|21904326|gb|AAM79205.1| putative isopentenyl diphosphate isomerase [Streptococcus pyogenes MGAS315] gi|28811417|dbj|BAC64350.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71853280|gb|AAZ51303.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS5005] Length = 329 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 324 >gi|94988371|ref|YP_596472.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS9429] gi|94992253|ref|YP_600352.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS2096] gi|94541879|gb|ABF31928.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS9429] gi|94545761|gb|ABF35808.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS2096] Length = 359 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALKY---QSLYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKELKEVDYLLYGR 354 >gi|239827520|ref|YP_002950144.1| isopentenyl pyrophosphate isomerase [Geobacillus sp. WCH70] gi|259491444|sp|C5D3G3|IDI2_GEOSW RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|239807813|gb|ACS24878.1| isopentenyl-diphosphate delta-isomerase, type 2 [Geobacillus sp. WCH70] Length = 349 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 115/336 (34%), Positives = 184/336 (54%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKI+HI D+ FDD +H++LP++ +++ LS P I+ Sbjct: 4 AKRKIEHIQHALS--TADQGASGFDDITFVHQSLPDVRMNDIHLHTALGELSLSSPFFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K IN+ LA AA+ ++AMAVGSQ D+ +FE +R+ + ++ + Sbjct: 62 AMTGGGGKQTFEINKGLAEAAKHCRIAMAVGSQTSALRDNKQRGTFEIVRKVNKNGIIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G+ + V A +AV ++ ADGL +HLN +QE++ P G+ +F + +I + A Sbjct: 122 NIGS-----EATVDDAKRAVDMIEADGLQIHLNVVQELVMPEGDRDFTGVLLRIEQIVQA 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + G++ D+ G GGT+++RIE+ R S+I F DW Sbjct: 177 VQVPVIVKEVGFGMSKETASRLEEVGVKIIDVGGLGGTNFARIENKRR--SNIITYFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIPT S+ I SGG+R +D K+I LGAS G+A P L+ ++ +A Sbjct: 235 GIPTAASIVEVAQTSPSLVVIGSGGVRTALDAAKAIALGASAVGMAGPLLRTLVEQGVEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +VA+IE L + + M LG K + +L +IR Sbjct: 295 LVASIEELHHDLTLIMGALGAKTIDKLQRVPLVIRG 330 >gi|242371998|ref|ZP_04817572.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis M23864:W1] gi|242350267|gb|EES41868.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis M23864:W1] Length = 349 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ I D + FD +H ++P I ++VD + + FP+ Sbjct: 5 LREQRKNEHVEIAMSQT--DAPQSDFDKLRFVHHSIPNIDVNQVDLTSHTSHFDMQFPVY 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ ++IN LAI A +T +AMAVGS + +SF + RQ P ++ Sbjct: 63 INAMTGGSE-WTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFSIARQINPEGMI 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SN+GA D V+KA QAV +L A L +H+N QE++ P GN F+ + + Sbjct: 122 FSNVGA-----DVPVEKAVQAVDLLEAQALQVHVNSPQELVMPEGNREFSTWMDNLESIV 176 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++VP+++KEVG G+S + ++ G++Y D++GRGGT++ IE+ R D+ Sbjct: 177 KRVNVPVIVKEVGFGMSKETFKSLVEIGVQYVDVSGRGGTNFIDIENERRTNKDMN-YLT 235 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 WG T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL Sbjct: 236 QWGQSTVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQTGI 295 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +ES M +L K ++ L + + Sbjct: 296 TNTIEYVESFLDHMKKIMTMLDAKDIEALRHKDIVFSPE 334 >gi|94990252|ref|YP_598352.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10270] gi|94994173|ref|YP_602271.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes MGAS10750] gi|94543760|gb|ABF33808.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10270] gi|94547681|gb|ABF37727.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes MGAS10750] Length = 359 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 31 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 87 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 88 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 146 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 200 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 201 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 257 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 258 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 317 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 318 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 354 >gi|330834018|ref|YP_004408746.1| isopentenyl pyrophosphate isomerase [Metallosphaera cuprina Ar-4] gi|329566157|gb|AEB94262.1| isopentenyl pyrophosphate isomerase [Metallosphaera cuprina Ar-4] Length = 366 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 191/338 (56%), Gaps = 8/338 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK++H+ I + + +D LIH+ALP +S +V+ FLGK LSFPL+++ Sbjct: 5 NRKLEHVEICLYEDVQGKVSTLLEDVVLIHQALPGLSLRDVNTKTRFLGKDLSFPLMVTG 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG++++ ++N +A E+ +AM VGSQRV +SF + R+ AP L++N Sbjct: 65 MTGGHDEL-GKVNATIAQVVEEMGLAMGVGSQRVAIERPETAESFRITRKMAPTAPLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLSSA 181 LG Q+ +G ++ A+ ++ AD + +HLNP QE+ QP G + K+ +S+ Sbjct: 124 LGLPQVTKGYGTKQFLDAIQMIEADAIAVHLNPAQELFQPEGEPEYPLSALDKLKDISND 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----DIGI 236 ++VP+++KE G G+S L + G + D++G+GGTSW +E R+ Sbjct: 184 LNVPVIIKESGTGISMETARLLDQYGFQLIDVSGQGGTSWIAVEMVRNRRKGNWKMRSSE 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F WGIPT S+ +R + IASGG+R G+DI K++ LGA+L G+A+P L+ A+ Sbjct: 244 LFAGWGIPTAASIVESRYVIPKGYLIASGGIRTGLDIAKALSLGANLAGMANPVLQHAVK 303 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + E + + +M L G+K V L +I Sbjct: 304 GKEQLKSFFEEVSFQLKAAMLLSGSKNVDSLRKAPIVI 341 >gi|327459080|gb|EGF05428.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1057] Length = 335 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQ---SPGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWHQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEAHSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L + + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHLVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|319946227|ref|ZP_08020467.1| isopentenyl-diphosphate delta-isomerase [Streptococcus australis ATCC 700641] gi|319747609|gb|EFV99862.1| isopentenyl-diphosphate delta-isomerase [Streptococcus australis ATCC 700641] Length = 338 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 102/338 (30%), Positives = 173/338 (51%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP I DEVD + F G+ +P Sbjct: 1 MTTNRKDEHIRLALEQT---PGYNSFDEVELIHSSLPTIDLDEVDVTTHFAGRDWDYPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E INR LA AE + GS D S+ ++ P + Sbjct: 58 INAMTGGSAKGGE-INRKLAQVAEACGILFVTGSYSAALKDP-QDSSYRVKDLHPDLLFA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D ++ + + L LH+N +QE++ P G +F + +A + Sbjct: 116 TNIG-----IDKPLELGLRTIEETQPLFLQLHVNLMQELLMPEGERSFRNWQEHLADYAK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VPL+LKEVG G+ + I+ ++ G+R DI+GRGGTS++ IE+ R D Sbjct: 171 QLPVPLVLKEVGFGMDAGTIQRAMELGVRTVDISGRGGTSFAYIENRRGGNR---SYLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+P ++ + +ASGG+R+ +D++K+++LGA GL+ L+ D Sbjct: 228 WGQTTVQALLGAQPLMDQVEVLASGGVRHPLDMIKALVLGAKGVGLSRTILELVETKPID 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + + +++ + M L + + +L L+ + Sbjct: 288 EVIAQVNAWKEDLRLIMCALSCQTLADLRKVPYLLYGR 325 >gi|327468606|gb|EGF14085.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK330] Length = 335 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K +IN LA AE + GS + + S+++ P+ +L Sbjct: 59 INAMTGGSHK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYQVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDIPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|325969729|ref|YP_004245921.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta moutnovskia 768-28] gi|323708932|gb|ADY02419.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vulcanisaeta moutnovskia 768-28] Length = 358 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 185/338 (54%), Gaps = 8/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK DHI I + ++ F++ H IH ALPEI FDEV+ S+ KKLSFP + Sbjct: 1 MIENRKDDHIRIA-SEQNVEEGNNLFNEVHFIHIALPEIDFDEVNTSITIFNKKLSFPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I +MTGG E+IN LA AE+ + M VGSQR+ +SF + + AP + Sbjct: 60 IGAMTGGTE-TAEKINTTLAKCAEEFNIGMYVGSQRIAIVKPETARSFRIVAENAPTALK 118 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q L+ V QA+ ++ AD + +HLNP QE+ QP G F + K+ Sbjct: 119 IANLGAPQVSRLDEKILVDWVSQAIDMINADAIAIHLNPAQEVFQPEGEPWFRGVIDKLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + + PL++KEVG G+S + + D+AG GGTS+ RIES R D Sbjct: 179 FIKKIANRPLIVKEVGNGISMEVARILASRVNPDAIDVAGIGGTSFIRIESIRAGAIDEA 238 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 VF WGIPT +++ R + IASGG+R+G+D K++ +GA+ ++ P L A+ Sbjct: 239 NVFSGWGIPTAIAICEVRNVYDGV-IIASGGIRSGLDGAKAMAIGANAFSMSRPLLLAAL 297 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 D I L +EF ++MFL G++ V EL + Sbjct: 298 KGFDETKKFIGKLLREFKIAMFLTGSRNVNELNNAPVV 335 >gi|332363142|gb|EGJ40927.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK49] Length = 335 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL + +P +E + +ASGG+R+ +D++K+++LGA GL+ L S++ Sbjct: 229 WGQSTLQSLLVLQPLRDEVELLASGGVRHPLDMVKALVLGAKAVGLSRTMLDLVENHSAE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLHLIMCALSCRNLQELKSVPYLLYGR 326 >gi|332364782|gb|EGJ42551.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1059] Length = 335 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG++K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSHK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVADGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QA+ L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPYQAAQQAIADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E +ASGG+R+ +D++KS++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVDLLASGGVRHPLDMIKSLVLGAKAVGLSRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L + Sbjct: 289 EVIDIVEGWKLDLRLIMCALSCRNLQELKSVPYLFYGR 326 >gi|306827524|ref|ZP_07460807.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes ATCC 10782] gi|304430322|gb|EFM33348.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes ATCC 10782] Length = 329 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVVLGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 324 >gi|323353482|ref|ZP_08088015.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis VMC66] gi|322121428|gb|EFX93191.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis VMC66] Length = 335 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|296332973|ref|ZP_06875430.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674923|ref|YP_003866595.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149824|gb|EFG90716.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413167|gb|ADM38286.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. spizizenii str. W23] Length = 349 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 184/336 (54%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I+ Sbjct: 4 AERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG ++ IN++LA AA + + +AVGSQ D + S+E +R+ P+ ++ + Sbjct: 62 AMTGGGGQLTYEINKSLARAARQAGIPLAVGSQMSALKDPSERVSYEIVRKVNPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +A +AV ++ AD L +HLN +QEI+ P G+ +F+ +I + S Sbjct: 122 NLGS-----EATADQAKEAVDMIEADALQIHLNVIQEIVMPEGDRSFSGALGRIEQICSQ 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++G DI+G GGT++S+IE+ R F W Sbjct: 177 VSVPVIVKEVGFGMSKESAGKLYEAGAAAIDISGYGGTNFSKIENLRRQRQ--ISFFNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T SL R + IASGGL++ +D+ ++I LGAS G+A FLK D + Sbjct: 235 GISTAASLAEIRSAFPASTMIASGGLQDALDVARAIALGASCTGMAGHFLKALTDSGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ I+ + +E + M +LG + + +L +I+ Sbjct: 295 LLEEIQLILEELKMIMTVLGARTIADLQKAPLVIKG 330 >gi|228474542|ref|ZP_04059273.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis SK119] gi|314935756|ref|ZP_07843108.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis subsp. hominis C80] gi|228271205|gb|EEK12573.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis SK119] gi|313656321|gb|EFS20061.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus hominis subsp. hominis C80] Length = 349 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 11/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I + + FD +H ++P I+ ++VD + ++FPL I+ Sbjct: 7 EQRKNEHVEIAMAQQDV--PQSDFDRMRFVHHSIPNINVNQVDLTSHTSNFDMTFPLYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG++ + IN LA+ A +T +AMAVGS + +SF +R+ P ++ S Sbjct: 65 AMTGGSD-WTKTINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIVRKTNPEGIIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA +AV +L A L +H+N QE++ P GN F+ + + Sbjct: 124 NVGA-----DVPVDKAVKAVELLDAQALQVHVNAPQELVMPEGNREFSTWLENVEAIVQR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++ + G+ Y D++G+GGT++ IE+ R D+ +W Sbjct: 179 VSVPVIIKEVGFGMSKELLQSLVNIGVTYVDVSGKGGTNFVTIENERRSNKDMD-YLSNW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL + Y N+ ASGGLR +D +KS+ LGA G++ PFL + Sbjct: 238 GQSTVESLLESISYQNKLNVFASGGLRTPLDAIKSLALGAKAVGMSRPFLNQVEHAGITS 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +ES M +L K + +L + + Sbjct: 298 TIEYVESFIDHMKSIMTMLDAKDINDLKQSKIV 330 >gi|125717210|ref|YP_001034343.1| isopentenyl pyrophosphate isomerase [Streptococcus sanguinis SK36] gi|125497127|gb|ABN43793.1| Isopentenyl-diphosphate delta-isomerase, putative [Streptococcus sanguinis SK36] Length = 335 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|139473956|ref|YP_001128672.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes str. Manfredo] gi|134272203|emb|CAM30449.1| isopentenyl-diphosphate delta-isomerase [Streptococcus pyogenes str. Manfredo] Length = 329 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNMMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 324 >gi|56808904|ref|ZP_00366613.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Streptococcus pyogenes M49 591] gi|209559232|ref|YP_002285704.1| isopentenyl pyrophosphate isomerase [Streptococcus pyogenes NZ131] gi|209540433|gb|ACI61009.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Streptococcus pyogenes NZ131] Length = 329 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A + L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPN-DDSYRLHEVADNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+L GI+ FDI+GRGGTS++ IE+ R + DW Sbjct: 171 IPVPIILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T L A+ ++ + +ASGG+R+ +D++K +LGA GL+ L+ ++ Sbjct: 228 GQTTVQCLLNAQGLMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + ++E + M L K ++EL L+ + Sbjct: 288 VIAIVNGWKEELKIIMCALDCKTIKELKGVDYLLYGR 324 >gi|329115974|ref|ZP_08244691.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parauberis NCFD 2020] gi|326906379|gb|EGE53293.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parauberis NCFD 2020] Length = 331 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 169/337 (50%), Gaps = 13/337 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + + FD+ LIH +LP +VD S F + FP I Sbjct: 1 MTNRKNDHIKYALKY---ESDYNSFDEIELIHSSLPSFDLKDVDLSTHFADQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA AE T + M GS ++ SF+LRQ AP +L + Sbjct: 58 NAMTGGSEK-GKAVNEKLARVAEATGIPMVTGSYSPALNNPQVKSSFQLRQVAPKMLLAT 116 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F + S + Sbjct: 117 NIG-----LDKSVDLGLQTVADMDPIFLQIHINLMQELLMPEGERTFKNWESNLKDYVEQ 171 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL+LKEVG G+ IE GI+ FDI+GRGGTS++ IE+ R +W Sbjct: 172 IKVPLVLKEVGFGMDRKTIERARDIGIKTFDISGRGGTSFAYIENQRGEGR---SYLNNW 228 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDA 300 G T +L + NE + +ASGG+RN +DI+KS+ILGA G++ L + Sbjct: 229 GQSTVQTLLNIQDMSNEVEILASGGVRNPLDIVKSLILGARAVGMSRTMLSLVERYPEEK 288 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + +++ + M L K V +L L+ + Sbjct: 289 VIAIVNGWKEDLAIIMCALNCKTVADLKQVDYLLYGR 325 >gi|322517208|ref|ZP_08070090.1| isopentenyl-diphosphate delta-isomerase [Streptococcus vestibularis ATCC 49124] gi|322124195|gb|EFX95719.1| isopentenyl-diphosphate delta-isomerase [Streptococcus vestibularis ATCC 49124] Length = 335 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 170/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI+ K + FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIHYALKY---ESPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-----VDKSVDLGLKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVATYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G T +L ++ + + +ASGG+RN +D++K ++LGA GL+ L+ S D Sbjct: 228 GQSTVQTLLQSQDLREDVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYSVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA I + + + M L + + EL ++ + Sbjct: 288 VVAIINGWKDDLRLIMCALDCRTIDELKSVDYILHGK 324 >gi|294496199|ref|YP_003542692.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalophilus mahii DSM 5219] gi|292667198|gb|ADE37047.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanohalophilus mahii DSM 5219] Length = 363 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 127/341 (37%), Positives = 196/341 (57%), Gaps = 14/341 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKK-FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ + + R F D L+HRALPE+ D VD S FLGKKL P + Sbjct: 3 TSSRKLEHMQLCAQQQVESRKAGPGFKDVTLVHRALPEMDMDSVDISTSFLGKKLDAPFM 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ IN LA AAE+T + + +GSQR D +SF + R AP+ + Sbjct: 63 IASITGGHPDTT-PINAALAEAAEETGIGIGLGSQRAAIEDPVQEESFSVVRDRAPNAFV 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ ++G++ A + V +L AD L +HLN LQE IQP G+ + I + Sbjct: 122 YGNIGAAQVK-EYGIEGAEKLVEMLDADALAVHLNFLQEAIQPEGDRDATGCIDAIEEIC 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------D 233 S ++VP+++KE G G+S D L ++G+ D+ G GGTSW+ +E +R + Sbjct: 181 S-INVPVIVKETGAGISREDALLLKEAGVAAIDVGGAGGTSWAGVEVYRAKQRGDRISGH 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D+GIPT SL R IA+GG+R G+DI KS+ LGA++ A PF+ P Sbjct: 240 LGELFWDFGIPTIPSLIECRV---SLPLIATGGVRTGLDIAKSLALGANMASAALPFVGP 296 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A+ D+V +E + +E V+MFL G ++ L +++++ Sbjct: 297 ALKEGDSVKQRLELMFEELKVAMFLCGCPDIESLRTSSSVV 337 >gi|321311759|ref|YP_004204046.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis BSn5] gi|320018033|gb|ADV93019.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis BSn5] Length = 349 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 186/337 (55%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I+ Sbjct: 4 AERKRQHINHALSTG--QKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K+ IN++LA AA + + +AVGSQ D + S+E +R+ P+ ++ + Sbjct: 62 AMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S Sbjct: 122 NLGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALERIEQICSH 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++G DI G GGT++S+IE+ R F W Sbjct: 177 VSVPVIVKEVGFGMSKESAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQ--ISFFNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T SL R + IASGGL++ +D+ K+I LGAS G+A FLK D + Sbjct: 235 GISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I+ + +E + M +LGT+ + +L +I+ + Sbjct: 295 LLEEIQLILEELKMIMTVLGTRTIADLQKAPLVIKGE 331 >gi|228478160|ref|ZP_04062768.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus salivarius SK126] gi|228249839|gb|EEK09109.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus salivarius SK126] Length = 334 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 166/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALKY---QSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-----VDKSVDLGIKTVEAMNPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDVETIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLRDNVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA + + + + M L + V EL ++ + Sbjct: 288 VVAIVNGWKDDLRLIMCALDCRTVDELKSVDYILHGK 324 >gi|325689459|gb|EGD31464.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK115] Length = 335 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWDFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSPK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLQPLFLQFHVNLMQELLMPEGEREFRSWRQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAILDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL + L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVSYLLYGR 326 >gi|324990336|gb|EGC22274.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK353] Length = 335 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVATGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPFQAAQQAVADLHPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGIDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKSVGLSRAMLDLIENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|319940308|ref|ZP_08014659.1| isopentenyl-diphosphate delta-isomerase [Streptococcus anginosus 1_2_62CV] gi|319810495|gb|EFW06834.1| isopentenyl-diphosphate delta-isomerase [Streptococcus anginosus 1_2_62CV] Length = 338 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + D FDD LIH +LP+ DE+D + +F G+ FP Sbjct: 1 MNKNRKDEHIRYALEY---DSPYNSFDDMELIHCSLPKYDLDEIDLTTQFAGRDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS ++ S+ ++Q P+ +L Sbjct: 58 INAMTGGSEK-GKGINQRLAQVAEACGILFVTGSYSAALNNP-TDDSYTVKQDRPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D QA+ L L +H+N +QE++ P G +F + + + Sbjct: 116 TNIG-----LDKPYSSGQQAITDLHPLFLQVHVNLMQELLMPEGERSFKTWRAHLKDYAE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ IE GIR D++GRGGTS++ IE+ R D D Sbjct: 171 QSTVPVVLKEVGFGMDLATIETAYDLGIRTVDLSGRGGTSFAYIENRRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+P ++ + SGG+R +D++K+ +LGA GL+ L+ S D Sbjct: 228 WGQSTLQALLNAQPMMDKMDILVSGGVRQPLDMVKAFVLGAKAVGLSRTMLELIETHSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + S +++ + M LG + ++EL L+ + Sbjct: 288 EVITIVNSWKEDLCLIMCALGCQNLRELRQVPYLLYRR 325 >gi|332523043|ref|ZP_08399295.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus porcinus str. Jelinkova 176] gi|332314307|gb|EGJ27292.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus porcinus str. Jelinkova 176] Length = 332 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 170/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ +E+D S + G+ ++P I Sbjct: 1 MTNRKNDHIKYALKY---QSSYNSFDDIELIHCSLPQYDLEEIDLSTHYAGQDFAYPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T++ M GS + N +S++LR AP+ +L + Sbjct: 58 NAMTGGSEK-GKAVNEKLAQVAAATEIPMVTGSYSAALKNPN-DQSYQLRSVAPNLLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V Q V + L +H+N +QE++ P G F + + Sbjct: 116 NIG-----LDKDVNLGLQTVREMNPIFLQVHINLMQELLMPEGERYFRSWHQHLKDYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I L GI+ FDI+GRGGTS++ IE+ R +W Sbjct: 171 IPVPIILKEVGFGMDLKTITLARDLGIQTFDISGRGGTSFAYIENQRGGNK---AYLDNW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L + +E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTSQCLLNCQAISDEVEILASGGVRNPLDMIKCLVLGARAVGLSRTVLELVESYQLDE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A I ++E + M L + + EL + + Sbjct: 288 VIAIINGWKEELKLIMCALNCRTIAELKTVDYYLYGR 324 >gi|112702898|emb|CAL34118.1| isopentenyl pyrophosphate isomerase IDI [Cronobacter sakazakii] Length = 347 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 6/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE++ D++D S G+ + P+L Sbjct: 6 LSQRKNDHLDIVLHPERAKQTIRTGFEQWRFEHCALPELALDDIDLSTRLFGRVMKAPIL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV + + ELR+YAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRRYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVEMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIKRVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R D + + Sbjct: 185 NALSVPVVVKEVGAGLSVPVARQLAEAGVTMLDVAGAGGTSWAAVEGERAASDHARSVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GASL G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDTAKALAMGASLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S+ AV+ + ++ V+ F G+ + L Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASISALREARL 340 >gi|325688649|gb|EGD30666.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK72] Length = 335 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 171/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQRL---GYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D A QA+ L L +H+N +QE++ P G F S +A S Sbjct: 117 TNIG-----LDKPYHAAQQAIADLQPLFLQVHVNLMQELLMPEGEREFRSWSQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 QLDLPLILKEVGFGMDRSTVEEARSLGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA G++ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGISRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|72550058|ref|XP_843634.1| isomerase [Leishmania major strain Friedlin] gi|56292025|emb|CAI29178.1| isopentenyl-pyrophosphate isomerase [Leishmania major] gi|323364154|emb|CBZ13161.1| putative isomerase [Leishmania major strain Friedlin] Length = 357 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 131/340 (38%), Positives = 201/340 (59%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGI--DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 V RK DHI+I R ++ + L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDICLHQDVEPHKRRTSIWNKYTLPYKALPEVDLQKIDTSCEFMGKRISFPF 73 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P + Sbjct: 74 FISSMTGG-EAHGRVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVPM 132 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+G VQLNY FG ++ + V+ + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 133 LANIGLVQLNYGFGPKEVNNLVNSVRADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQLL 192 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIG 235 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +IG Sbjct: 193 PHIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKAEEENIG 252 Query: 236 IVFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + +D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL Sbjct: 253 YLLRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKALMMGAEYATAAMPFLAA 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++SS+AV A I+ +R+E VSMF G + ++EL + Sbjct: 313 ALESSEAVRAVIQRMRQELRVSMFTCGARNIEELRRMKVI 352 >gi|312863054|ref|ZP_07723292.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus vestibularis F0396] gi|311100590|gb|EFQ58795.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus vestibularis F0396] Length = 335 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 169/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI+ K + FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIHYALKY---ESPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ RQ P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-----VDKSVDLGLKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVATYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L ++ + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQSQDLREDVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA I + + + M L + + EL ++ + Sbjct: 288 VVAIINGWKDDLRLIMCALDCRTIDELKSVDYILHGK 324 >gi|322386749|ref|ZP_08060373.1| isopentenyl-diphosphate delta-isomerase [Streptococcus cristatus ATCC 51100] gi|321269031|gb|EFX51967.1| isopentenyl-diphosphate delta-isomerase [Streptococcus cristatus ATCC 51100] Length = 334 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DHIN + P FDD LIH +LP E+D S F G+ FP Sbjct: 1 MSQSRKDDHINYALEQPL---GYNSFDDIELIHCSLPAYDLAEIDLSTHFAGRDWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K E IN LA AE + GS + + S+ + + P +L Sbjct: 58 INAMTGGSPKGRE-INEKLAKVAEACGILFVTGSYSAALKNPD-DDSYAVAKDKPSLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SN+G D V QAV L L LH+N +QE++ P G F + Sbjct: 116 SNIG-----LDKPVAAGLQAVSDLKPLFLQLHVNVMQELLMPEGERTFRTWKQHLEAYGK 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 PL+LKEVG G+ IE GI FDI+GRGGTS++ IE+ R + D D Sbjct: 171 DFPAPLVLKEVGFGMDRKTIEEAQALGISTFDISGRGGTSFAYIENRRSGQRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T +L A+ + ++ + ++SGG+R+ +D++K+++LGA GL+ L + Sbjct: 228 WGQTTAQALLAAQDWVDKVELLSSGGIRHPLDMVKALVLGAKAVGLSRTMLALVEKYPVE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + +++ + M L + +++L L+ + Sbjct: 288 EVIAIVNGWKEDLRLLMCALSCRNLEDLKSVPYLLYGR 325 >gi|225868465|ref|YP_002744413.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. zooepidemicus] gi|225701741|emb|CAW99111.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. zooepidemicus] Length = 330 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 164/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI FDD LIH +LP ++D S F G FP I Sbjct: 1 MTNRKDDHITHALSYH---SPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + SF+LR AP L + Sbjct: 58 NAMTGGS-KKAQAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQLRGVAPDLQLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 116 NIG-----LDKAVDLGIRAVEEMNPLFLQVHVNTMQELLMPEGERSFKHWKDHLAAYAKQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R DW Sbjct: 171 LPVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNR---SYLDDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAKDLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVMLELVETYPVEQ 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I S ++E + M L + + +L L+ + Sbjct: 288 VITMINSWKEELRLIMCALDCRTLSDLRQVDYLLYGR 324 >gi|156932565|ref|YP_001436481.1| isopentenyl pyrophosphate isomerase [Cronobacter sakazakii ATCC BAA-894] gi|166226197|sp|A7MPA0|IDI2_ENTS8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156530819|gb|ABU75645.1| hypothetical protein ESA_00346 [Cronobacter sakazakii ATCC BAA-894] Length = 347 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 125/336 (37%), Positives = 190/336 (56%), Gaps = 6/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV + + F+ W H ALPE++ D++D S G+ + PLL Sbjct: 6 LSQRKNDHLDIVLHPERAKQTIRTGFEQWRFEHCALPELALDDIDLSTRLFGRVMKAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+LA AA+ +AM VGSQRV + + ELR+YAP L Sbjct: 66 ISSMTGGARRASD-INRHLAEAAQTLGLAMGVGSQRVALESEDNWGLTGELRRYAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I + Sbjct: 125 LANLGAAQIGSLQGLDYARRAVEMVEADALIIHLNPLQEALQTGGDRDWRGVLAAIKRVV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 +A+ VP+++KEVG GLS ++G+ D+AG GGTSW+ +E R D + + Sbjct: 185 NALSVPVVVKEVGAGLSVPVARQLAEAGVTMLDVAGAGGTSWAAVEGERAASDHARSVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT +L IASGG+R+G+D K++ +GASL G A+ L A Sbjct: 245 AFADWGIPTAQALRQIHQAFPSMPLIASGGIRDGIDTAKALAMGASLVGQAAAVLGSATT 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S+ AV+ + ++ V+ F G+ + L Sbjct: 305 STSAVLDHFAVVIEQLRVACFCTGSASLSALREARL 340 >gi|315425794|dbj|BAJ47448.1| isopentenyl-diphosphate delta-isomerase [Candidatus Caldiarchaeum subterraneum] gi|315427676|dbj|BAJ49272.1| isopentenyl-diphosphate delta-isomerase [Candidatus Caldiarchaeum subterraneum] Length = 358 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 141/340 (41%), Positives = 196/340 (57%), Gaps = 10/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI I + R + + L+H+A PEI D++ FLG++ S P +I Sbjct: 3 IEARKSDHIKISLEKDVSYRKSTWLEYVELVHQAAPEIDPDDIQTETIFLGRRFSHPFII 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SMTGG + ERIN NL AA KV M VGSQR + +F R++ P LI Sbjct: 63 ESMTGGTAEA-ERINANLGEAAAIFKVPMGVGSQRAGVVKPETVYTFRAAREHGPDAFLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQL + GV+ +AV ++ AD L +HLNPLQEIIQP+G F +LS + L Sbjct: 122 GNIGAVQL-VENGVEMGVKAVEMIDADALAVHLNPLQEIIQPDGKARFRNLSKTLEKLRK 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD------I 234 + VP++LKE+GCGLS + + ++G+ FD+AG GGT+W+ IE R E + Sbjct: 181 EVSVPIILKEIGCGLSREVVAMADEAGVDAFDVAGSGGTNWTMIEMIRAEEMRDIEKKAL 240 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 VF +WGIPT ++ A + IASGGLR G+D K+I LGAS+ GLA PFL+PA Sbjct: 241 AEVFLEWGIPTAAAVMEAVDATTK-PVIASGGLRTGLDAAKAIALGASMAGLARPFLEPA 299 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 S + V+A ++ L + SMFL G + V EL ++ Sbjct: 300 TKSVEDVLATLKRLSDQLKTSMFLTGCRSVDELRQAPKVV 339 >gi|332364386|gb|EGJ42160.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK355] Length = 335 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K ++N LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGS-KKGGQVNEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWHQHLTDYGQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VPL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D D Sbjct: 172 RLEVPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +D++K+++LGA G++ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDMIKALVLGAKAVGISRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKNVPYLLYGR 326 >gi|311030568|ref|ZP_07708658.1| isopentenyl pyrophosphate isomerase [Bacillus sp. m3-13] Length = 353 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 106/336 (31%), Positives = 179/336 (53%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI + + FDD +H++LP +S ++ + + LS P+ I+ Sbjct: 4 AQRKMDHIQHALTTGQV--RQTGFDDVMFVHQSLPNLSTTDIQLNTKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K IN+ LA A V +AVGSQ D + ++E +R+ P+ ++ + Sbjct: 62 AMTGGGGKRTWEINKALAEVANMCDVGLAVGSQMSAIKDRDEAATYEIVRKANPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V +A QAV +L A+ L +HLN +QE++ P G+ +F+ +I + ++ Sbjct: 122 NLGS-----EATVDQAKQAVDMLEANALQIHLNVIQELVMPEGDRDFSGALGRIEDIVNS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KE G G+S + + +G+ D++G GGT++S+IE+ R + F DW Sbjct: 177 LNVPVIVKETGFGISRETAKKLVDAGVSIIDVSGFGGTNFSKIENERRTQR--LEFFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GIPT S+ + I SGG++ +DI K+I LGAS GLA FLK M + + Sbjct: 235 GIPTAASIAEVKHAVPGTSIIGSGGIQKPMDIAKAIALGASAVGLAGYFLKVFMEEGQED 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ I E M L +++L +I+ Sbjct: 295 LIHLIHQTHDELRWMMTALSASTIEQLQQAPIVIKG 330 >gi|254227994|ref|ZP_04921424.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio sp. Ex25] gi|262396024|ref|YP_003287877.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [Vibrio sp. Ex25] gi|151939490|gb|EDN58318.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio sp. Ex25] gi|262339618|gb|ACY53412.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [Vibrio sp. Ex25] Length = 339 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 178/336 (52%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFQAIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQR+ + +R A L Sbjct: 65 SSMTGGA-KDAEVINCRLAEAASELGIAMGVGSQRISLEERQHAGLGKTIRDLAKDVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L S Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVESIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGHVAQRLVDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTAKCLTQIRAQHPTLPLIASGGVHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + AVV E + E +S F G+ ++ L L Sbjct: 304 TQAVVEHFEQMALELRLSCFGTGSSKISALTQARCL 339 >gi|146102259|ref|XP_001469320.1| isomerase; isopentenyl-diphosphate delta-isomerase [Leishmania infantum] gi|134073689|emb|CAM72426.1| putative isomerase [Leishmania infantum JPCM5] gi|322503343|emb|CBZ38428.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 357 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 131/340 (38%), Positives = 200/340 (58%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGI--DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 V RK DHI+I R ++ + L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDICLHKDVEPHKRRTSIWNKYTLPYKALPEVDLQKIDTSCEFMGKRISFPF 73 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 ISSMTGG IN NLA A E K+ +GS R++ +A+ +F ++++ P + Sbjct: 74 FISSMTGG-EAHGRVINENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVPM 132 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+G VQLNY FG ++ + V + ADGL +HLN QE+ QP G+TNF L K+ L Sbjct: 133 LANIGLVQLNYGFGPKEVNNLVDSVRADGLCIHLNHTQEVCQPEGDTNFEGLIEKLRQLL 192 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIG 235 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +IG Sbjct: 193 PLIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKVEEENIG 252 Query: 236 IVFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +F+D G+PT + L + P + IA GG+RNG+D+ K++++GA A PFL Sbjct: 253 YLFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKALMMGAEYATAAMPFLAA 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++SS+AV A I+ +R+E VSMF G + + +L + Sbjct: 313 ALESSEAVRAVIQRMRQELRVSMFTCGARNIGDLRRMKVI 352 >gi|322390281|ref|ZP_08063810.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 903] gi|321143012|gb|EFX38461.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 903] Length = 334 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D + F G+ P Sbjct: 1 MSENRKDQHIRYALEQ---SSSYNSFDEIELIHRSLPLVDLAEIDLTTHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+ +++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAGLKDPN-DQSYAVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + V L L +H+N +QE++ P G F + Sbjct: 116 TNIG-----IDKEPDLGLRTVEELHPLFLQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L +GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFPVPVVLKEVGFGMDPKTVQAALDAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEVLASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + + LG + ++EL L+ + Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKELREVDYLLYGK 325 >gi|290580615|ref|YP_003485007.1| putative dehydrogenase [Streptococcus mutans NN2025] gi|254997514|dbj|BAH88115.1| putative dehydrogenase [Streptococcus mutans NN2025] Length = 331 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI FDD LIH +LP+ E+D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALDYC---SPYNSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ + GS + + S+++++ PH +L + Sbjct: 58 NAMTGGSQK-GKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDT-SYQVKKSRPHLLLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D Q QAV L L +H+N +QE++ P G F ++ + Sbjct: 116 NIG-----LDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +P +LKEVG G+ I+ + G++ DI+GRGGTS++ IE+ R W Sbjct: 171 LQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNR---SYLNQW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T L A+P ++ + +ASGG+R+ +DI+K+++LGA GL+ L+ S Sbjct: 228 GQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + +++ + M L + + EL L+ + Sbjct: 288 VIAIVNGWKEDLRLIMCALNCQTIAELRNVDYLLYGR 324 >gi|323127098|gb|ADX24395.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 330 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 169/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP ++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDMELIHHSLPSYDVADIDLSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPNDA-SYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V++ Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVERGQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVSTIKIAHELGIQTFDISGRGGTSFAYIENQRGLDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVEILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + +++ + M L + +Q+L L+ + Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDLRQVDYLLYGR 324 >gi|322372486|ref|ZP_08047022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C150] gi|321277528|gb|EFX54597.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus sp. C150] Length = 334 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 164/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F+G+ FP I Sbjct: 1 MTNRKDDHIRYALKY---QSPYNSFDDMELIHKSLPTYDLDQIDLSTHFVGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS +SF+ RQ P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GETPESFDYRQEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-----VDKSVDLGIKTVEAMNPVFLQLHVNLMQELLMPEGERIFHTWKENVAAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +D PL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IDCPLVLKEVGFGMDVETIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L + + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQTQDLREAVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA + + + + M L + V EL ++ + Sbjct: 288 VVAVVNGWKDDLRLIMCALDCRTVDELKSVDYILHGK 324 >gi|24379383|ref|NP_721338.1| isopentenyl pyrophosphate isomerase [Streptococcus mutans UA159] gi|32129629|sp|Q8DUI9|IDI2_STRMU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|24377312|gb|AAN58644.1|AE014934_8 putative dehydrogenase (FMN-dependent family protein) [Streptococcus mutans UA159] Length = 331 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI FDD LIH +LP+ E+D S F G+ FP I Sbjct: 1 MTNRKDDHIKYAL---DYRSPYNSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ + GS + + S+++++ PH +L + Sbjct: 58 NAMTGGSQK-GKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDT-SYQVKKSRPHLLLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D Q QAV L L +H+N +QE++ P G F ++ + Sbjct: 116 NIG-----LDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +P +LKEVG G+ I+ + G++ DI+GRGGTS++ IE+ R W Sbjct: 171 LQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNR---SYLNQW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T L A+P ++ + +ASGG+R+ +DI+K+++LGA GL+ L+ S Sbjct: 228 GQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + +++ + M L + + EL L+ + Sbjct: 288 VIAIVNGWKEDLRLIMCALNCQTIAELRNVDYLLYGR 324 >gi|146284188|ref|YP_001174341.1| isopentenyl pyrophosphate isomerase [Pseudomonas stutzeri A1501] gi|166226202|sp|A4VR98|IDI2_PSEU5 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145572393|gb|ABP81499.1| isopentenyl-diphosphate delta-isomerase [Pseudomonas stutzeri A1501] Length = 346 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 131/335 (39%), Positives = 192/335 (57%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV I F + H ALPE+ D++D G++L PLLIS Sbjct: 8 SRKNDHLDIVLDPTRAIAATGTGFGAFRFEHCALPELHLDQIDLQTALFGRRLRAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLIS 121 SMTGG + IN +LA AA++ +AMAVGSQRV + + +LRQ AP +L++ Sbjct: 68 SMTGGAARSAA-INAHLAEAAQQLGIAMAVGSQRVALETAGDQGLTGQLRQLAPDILLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N GA QL +GV +A +AV ++ D L +HLNPLQE +Q G+ ++ + I L++ Sbjct: 127 NFGAAQLVRGYGVDEARRAVEMIEGDALIVHLNPLQEAVQTGGDRDWRGVLQAIEALAAR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + I F Sbjct: 187 LPVPVVIKEVGAGISAAVARRLVDAGVAAIDVAGAGGTSWAAVEAARAADASQQAIAEAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L R C IASGG+R+GV+ K+I LGA L G A+ L+ AM SS Sbjct: 247 ADWGIPTAQALLAVRDACPNTPLIASGGIRDGVEAAKAICLGADLVGQAAGVLQAAMHSS 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AVV+ E L ++ ++ F G+ + L L Sbjct: 307 EAVVSHFEVLIEQLRIACFCTGSADLAGLRQARLL 341 >gi|116627446|ref|YP_820065.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus LMD-9] gi|116100723|gb|ABJ65869.1| L-lactate dehydrogenase (FMN-dependent) or related alpha-hydroxy acid dehydrogenase [Streptococcus thermophilus LMD-9] Length = 335 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 166/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALKY---QSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F +A + Sbjct: 116 NIG-----VDKSVDLGIKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVAAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA + + + + M L + + EL ++ + Sbjct: 288 VVAIVNGWKDDLRLIMCALDCRTIDELKSVDYILYGK 324 >gi|91774306|ref|YP_566998.1| isopentenyl pyrophosphate isomerase [Methanococcoides burtonii DSM 6242] gi|121689010|sp|Q12TH8|IDI2_METBU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|91713321|gb|ABE53248.1| Isopentenyl-diphosphate delta-isomerase [Methanococcoides burtonii DSM 6242] Length = 362 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 132/340 (38%), Positives = 197/340 (57%), Gaps = 14/340 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+ + K P RN FDD LIH+ALP+I DE+D S +FLGK L P L Sbjct: 3 TSKRKIEHLELCAKRPVESRNVTSGFDDVMLIHKALPQIHMDEIDLSTDFLGKSLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ +N LA AAE+ V + VGSQR D SF + R AP+ + Sbjct: 63 IASITGGHPDTT-PVNAALAEAAEELGVGIGVGSQRAAIEDPEQESSFSVVRDKAPNAFV 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ ++G++ + V +L AD L +HLN LQE IQP G+ + + I + Sbjct: 122 YGNVGAAQIK-EYGIEAIEKLVDMLDADALAVHLNFLQEAIQPEGDRDATGVLEMIKEVC 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------D 233 S ++VP++ KE G G+S D L ++G+ D+ G GGTSWS +E +R +S D Sbjct: 181 S-LNVPIIAKETGAGISKEDAALLKEAGVSAIDVGGVGGTSWSGVEVYRAHDSGDAISED 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G ++ D+GIPT S+ R + +A+GG+R G+DI KS+ LGA A PF+ P Sbjct: 240 LGNLYWDFGIPTVSSVLECRSF---VPVVATGGVRTGLDIAKSLSLGAYAASAALPFVGP 296 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ +D VV+++ + E V+MFL G + EL ++ + Sbjct: 297 ALIGADEVVSSLSKMLNELRVAMFLCGCGNINELRTSSKV 336 >gi|329726554|gb|EGG63017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU144] Length = 349 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I +VD + L++P+ I+ Sbjct: 7 EQRKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG++ ++IN LAI A +T +AMAVGS + + I++F +R+ P + S Sbjct: 65 AMTGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPDMIETFSIVRKTNPKGTIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA QAV +L A L +H+N QE++ P GN FA S I + Sbjct: 124 NVGA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ W Sbjct: 179 VDVPVIIKEVGFGMSKETLQALYDIGVNYVDVSGRGGTNFVDIENERRSNKDMN-YLSQW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL + + + ASGGLR +D +K + LGA G++ PFL S Sbjct: 238 GQSTVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITN 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V +ES + M +L ++ L ++ + Sbjct: 298 TVDYVESFIQHMKKIMTMLDAPNIERLRQADIVMSPE 334 >gi|296875771|ref|ZP_06899834.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 15912] gi|296433236|gb|EFH19020.1| isopentenyl-diphosphate delta-isomerase [Streptococcus parasanguinis ATCC 15912] Length = 334 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 99/338 (29%), Positives = 170/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D + F G+ P Sbjct: 1 MSENRKDQHIRYALEQ---SSSYNSFDEIELIHRSLPLVDLAEIDLTTHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+ +++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAALKDPN-DQSYAVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + V L L +H+N +QE++ P G F + Sbjct: 116 TNIG-----IDKEPDLGLRTVEELHPLFLQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L++GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFHVPVVLKEVGFGMDPKTVQAALEAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEVLASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + + LG + ++EL L+ + Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKELREVDYLLYGK 325 >gi|221310205|ref|ZP_03592052.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] gi|221314528|ref|ZP_03596333.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319450|ref|ZP_03600744.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323726|ref|ZP_03605020.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767492|ref|NP_390168.3| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] gi|13878926|sp|P50740|IDI2_BACSU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|33357818|pdb|1P0K|A Chain A, Ipp:dmapp Isomerase Type Ii Apo Structure gi|33357819|pdb|1P0K|B Chain B, Ipp:dmapp Isomerase Type Ii Apo Structure gi|33357820|pdb|1P0N|A Chain A, Ipp:dmapp Isomerase Type Ii, Fmn Complex gi|33357821|pdb|1P0N|B Chain B, Ipp:dmapp Isomerase Type Ii, Fmn Complex gi|12862826|dbj|BAB32625.1| isopentenyl diphosphate isomerase [Bacillus subtilis] gi|49609490|emb|CAG77478.1| isopentenyl diphosphate isomerase, type II [Bacillus subtilis] gi|225185120|emb|CAB14203.2| isopentenyl diphosphate isomerase [Bacillus subtilis subsp. subtilis str. 168] Length = 349 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 185/337 (54%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HIN + + DD +H +LP+++ ++VD S + S P+ I+ Sbjct: 4 AERKRQHINHALS--IGQKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K+ IN++LA AA + + +AVGSQ D + S+E +R+ P+ ++ + Sbjct: 62 AMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +A +AV ++GA+ L +HLN +QEI+ P G+ +F+ +I + S Sbjct: 122 NLGS-----EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++G DI G GGT++S+IE+ R F W Sbjct: 177 VSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQ--ISFFNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T SL R + IASGGL++ +D+ K+I LGAS G+A FLK D + Sbjct: 235 GISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I+ + +E + M +LG + + +L +I+ + Sbjct: 295 LLEEIQLILEELKLIMTVLGARTIADLQKAPLVIKGE 331 >gi|325978454|ref|YP_004288170.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178382|emb|CBZ48426.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 332 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 169/338 (50%), Gaps = 15/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MI-NRKDEHIKYALKY---QSPYNSFDDMELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + S+ ++ P +L Sbjct: 57 INAMTGGSEK-GRAVNQKLAQIAQATGLVMVTGSYSAALKNP-HDDSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + Q +H + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-----IDKPYELGLQTIHEMQPIFLQIHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNR---SYLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I + + + M L K + EL L+ + Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAELRQVDYLLYGK 324 >gi|27468843|ref|NP_765480.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis ATCC 12228] gi|57867838|ref|YP_189495.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis RP62A] gi|251811948|ref|ZP_04826421.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis BCM-HMP0060] gi|282875238|ref|ZP_06284111.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis SK135] gi|293367055|ref|ZP_06613727.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis M23864:W2(grey)] gi|32129625|sp|Q8CRB6|IDI2_STAES RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|71152146|sp|Q5HLP8|IDI2_STAEQ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|27316391|gb|AAO05566.1|AE016750_171 isopentenyl diphosphate isomerase [Staphylococcus epidermidis ATCC 12228] gi|57638496|gb|AAW55284.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis RP62A] gi|251804547|gb|EES57204.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis BCM-HMP0060] gi|281296003|gb|EFA88524.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis SK135] gi|291318785|gb|EFE59159.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733819|gb|EGG70143.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU028] gi|329735085|gb|EGG71381.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis VCU045] Length = 349 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 171/337 (50%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I +VD + L++P+ I+ Sbjct: 7 EQRKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG++ ++IN LAI A +T +AMAVGS + N I++F +R+ P + S Sbjct: 65 AMTGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPNMIETFSIVRKTNPKGTIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA QAV +L A L +H+N QE++ P GN FA S I + Sbjct: 124 NVGA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ W Sbjct: 179 VDVPVIIKEVGFGMSKETLQALYDIGVNYVDVSGRGGTNFVDIENERRSNKDMN-YLSQW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL + + + ASGGLR +D +K + LGA G++ PFL S Sbjct: 238 GQSTVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITN 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V +ES + M +L ++ L ++ + Sbjct: 298 TVDYVESFIQHMKKIMTMLDAPNIERLRQADIVMSPE 334 >gi|304438858|ref|ZP_07398782.1| isopentenyl-diphosphate delta-isomerase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372659|gb|EFM26241.1| isopentenyl-diphosphate delta-isomerase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 342 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 197/340 (57%), Gaps = 12/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK +HI + FDD L+H +LPE F EVD S FL KK++FPL+ Sbjct: 1 MRKYRKREHIENYLRSSY--TGSPLFDDVMLMHNSLPECDFYEVDTSTMFLNKKINFPLM 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG++ E INR+L+ A++ + MAVGSQ + D +AIKSF+ +R ++ Sbjct: 59 INAMTGGSD-FTEDINRDLSKIAKEFNLPMAVGSQTIALEDKDAIKSFKIVRDNMKDGIV 117 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + NL + +A AV ++GADGL +HLNP QE+ G+ F + + I + Sbjct: 118 LGNLSGRA-----TIDEAKFAVEMIGADGLQIHLNPAQELAMEEGDRTFRGILTNIEKIV 172 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 S++DVP+++KEVG G+S ++ G+R D++G GGT++ +E+ R+ E+D+ ++ Sbjct: 173 SSLDVPVIVKEVGFGMSKDVVKKLYDIGVRIVDVSGYGGTNFMEVENLRNPENDLSELYS 232 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT +S+ A+ ++ Q I+SGG++N +D++KSI++GA + ++ L + Sbjct: 233 -WGIPTAMSVIGAKSLGLDDLQIISSGGVKNSLDVVKSIVIGADMVAISGEILSYLVHGG 291 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + L + + M L G K ++EL + LI + Sbjct: 292 YEYTMQYLAGLIYKTKIVMTLTGAKNIEELKESKYLITGK 331 >gi|327482514|gb|AEA85824.1| isopentenyl pyrophosphate isomerase [Pseudomonas stutzeri DSM 4166] Length = 346 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 131/335 (39%), Positives = 192/335 (57%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV I F + H ALPE+ D++D G++L PLLIS Sbjct: 8 SRKNDHLDIVLDPTRAIAATGTGFGAFRFEHCALPELHLDQIDLQTALFGRRLRAPLLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLIS 121 SMTGG + IN +LA AA++ +AMAVGSQRV + + +LRQ AP +L++ Sbjct: 68 SMTGGAARSAA-INAHLAEAAQQLGIAMAVGSQRVALETAGDQGLTGQLRQLAPDILLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N GA QL +GV +A +AV ++ D L +HLNPLQE +Q G+ ++ + I L++ Sbjct: 127 NFGAAQLVRGYGVDEARRAVEMIEGDALIVHLNPLQEAVQTGGDRDWRGVLQAIEALAAR 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + I F Sbjct: 187 LPVPVVIKEVGAGISAAVARRLVDAGVAAIDVAGAGGTSWAAVEAARAADASQQAIAEAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L R C IASGG+R+GV+ K+I LGA L G A+ L+ AM SS Sbjct: 247 ADWGIPTAQALLAVREACPNTPLIASGGIRDGVEAAKAICLGADLVGQAAGVLQAAMRSS 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AVV+ E L ++ ++ F G+ + L L Sbjct: 307 EAVVSHFEVLIEQLRIACFCTGSADLAGLRQARLL 341 >gi|195978202|ref|YP_002123446.1| isopentenyl pyrophosphate isomerase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974907|gb|ACG62433.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 330 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 164/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI FDD LIH +LP ++D S F G FP I Sbjct: 1 MTNRKDDHITHALSY---HSPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + SF++R AP L + Sbjct: 58 NAMTGGS-KKGQAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQVRGVAPDLQLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 116 NIG-----LDKAVGLGIRAVEEMKPLFLQVHVNAMQELLMPEGERSFKHWKDHLAAYAKQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R DW Sbjct: 171 LSVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNR---PYLDDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAKDLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVMLELVETYPVEQ 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + S ++E + M L + + +L L+ + Sbjct: 288 VITVVNSWKEELRLIMCALDCRTLSDLRQMDYLLYGR 324 >gi|322411587|gb|EFY02495.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 330 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 167/337 (49%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP +++ S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDMELIHHSLPSYDVADIELSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + + S+ L + A L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPS-DDSYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D ++ A Q V + L +H+N +QE++ P G F +A S Sbjct: 116 NIG-----LDKPIELAQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYVSQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVNTIKMAHELGIQTFDISGRGGTSFAYIENQRGLDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVDILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + +++ + M L + +Q+L L+ + Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDLRQVDYLLYGR 324 >gi|312277966|gb|ADQ62623.1| L-lactate dehydrogenase (FMN-dependent) alpha-hydroxy acid dehydrogenase-like protein [Streptococcus thermophilus ND03] Length = 335 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 164/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALKY---QSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-----VDKSVDLGIKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA + + + M L + + EL ++ + Sbjct: 288 VVAIVNGWKDDLRFIMCALDCRTIDELKSVDYILYGK 324 >gi|306831546|ref|ZP_07464704.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426331|gb|EFM29445.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 332 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 15/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI K FDD LIH + P+ E+D F G+ FP Sbjct: 1 MI-NRKDEHIKYALKY---QSPYNSFDDMELIHHSFPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + S+ ++ P +L Sbjct: 57 INAMTGGSEK-GRAVNQKLAQIAQATGLVMVTGSYSAALKNP-HDDSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + Q +H + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-----IDKPYELGLQTIHEMQPIFLQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNR---SYLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA GL+ LK S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGLSRAILKLVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I + + + M L K + EL L+ + Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAELRQVDYLLYGK 324 >gi|225870470|ref|YP_002746417.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. equi 4047] gi|225699874|emb|CAW93762.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equi subsp. equi 4047] Length = 330 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI FDD LIH +LP ++D S F G FP I Sbjct: 1 MTNRKDDHITHALSYH---SPYNAFDDMELIHCSLPSYDLADIDLSTHFAGCDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + SF+LR AP L + Sbjct: 58 NAMTGGS-KKGQAVNEKLAKVAAATGILMVTGSYSAALKNPEDT-SFQLRGVAPDLQLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V +AV + L +H+N +QE++ P G +F +A + Sbjct: 116 NIG-----LDKAVDLGIRAVEEMKPLFLQVHVNAMQELLMPEGERSFKHWKDHLAAYAKQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL+LKEVG G+ I + G++ FDI+GRGGTS++ IE+ R DW Sbjct: 171 LPVPLILKEVGFGMDIKTITIARDMGVKTFDISGRGGTSFAYIENQRGSNR---SYLDDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ +E + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAKGLVDEVEILASGGVRHPLDMVKCLVLGARAVGLSRVVLELVETYPVEQ 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++A I S +KE + M L + + +L L+ + Sbjct: 288 IIATINSWKKELKLIMCALDCRTLSDLRQVDYLLYGR 324 >gi|315222757|ref|ZP_07864645.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus anginosus F0211] gi|315188170|gb|EFU21897.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus anginosus F0211] Length = 338 Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + FDD LIH +LP+ DE+D + +F GK FP Sbjct: 1 MSENRKDEHIKYALEQT---SGYNSFDDMELIHCSLPKYDLDEMDLTTQFAGKDWEFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K + IN+ LA AE + GS ++ A S+ + + P+ +L Sbjct: 58 INAMTGGSEK-GKDINQRLAQVAESCGILFVTGSYSAAVNNP-ADDSYAVSKDKPNLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D QA+ L L +H+N +QE++ P G +F + + + Sbjct: 116 TNIG-----VDKPYSLGQQAITDLHPLFLQVHVNLMQELLMPEGERSFKTWRAHLKDYAE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ IE GIR D++GRGGTS++ IE+ R D D Sbjct: 171 QSTVPVVLKEVGFGMDLATIETAYDLGIRTVDLSGRGGTSFAYIENRRGGNRD---YLND 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T +L A+P ++ + SGG+R +D++K+ +LGA GL+ L+ S D Sbjct: 228 WGQSTLQALLNAQPMMDKMDILVSGGVRQPLDMVKAFVLGAKAVGLSRTMLELIETYSVD 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + +++ + M LG + + EL L+ + Sbjct: 288 EVITIVNGWKEDLRLIMCALGCQNLPELRRVPYLLYGR 325 >gi|312868198|ref|ZP_07728398.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parasanguinis F0405] gi|311095943|gb|EFQ54187.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus parasanguinis F0405] Length = 334 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 100/338 (29%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK HI + + FD+ LIHR+LP + E+D F G+ P Sbjct: 1 MSENRKDQHIRYALEQ---SSSYNSFDEIELIHRSLPLVDLAEIDLITHFAGRDWEVPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ + E IN+ LA AE + GS D N +S+E+++ PH +L Sbjct: 58 INAMTGGSKRAKE-INQKLAAVAEACGILFVTGSYSAALKDPN-DQSYEVKKDHPHLLLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + V L L +H+N +QE++ P G F + Sbjct: 116 TNIG-----IDKEPDLGLRTVEELHPLFLQVHVNLMQELLMPEGERIFHTWKDHLKSYGQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP++LKEVG G+ ++ L +GI+ DI+GRGGTS++ IE+ R D Sbjct: 171 GFPVPVVLKEVGFGMDPQTVQAALDAGIKTVDISGRGGTSFAYIENRRGGNR---AYLDD 227 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T L + ++ + +ASGG+R+ +D++K+++LGA GL+ FL+ S + Sbjct: 228 WGQSTAQCLLQLQDQIDQVEILASGGIRHPLDMVKALVLGARGVGLSRVFLEMVETKSIE 287 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ ++ +++ + + LG + ++EL L+ + Sbjct: 288 EVIVLVQGWKEDLRLLLCALGCQNLKELREVDYLLYGR 325 >gi|223042448|ref|ZP_03612497.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus capitis SK14] gi|222444111|gb|EEE50207.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus capitis SK14] Length = 349 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 107/335 (31%), Positives = 171/335 (51%), Gaps = 11/335 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ I D + FD +H ++P I+ D+VD + + P+ Sbjct: 5 LREQRKNEHVEIAMSQH--DAPQSDFDKLRFVHHSIPSINVDQVDLTSHTSHFDMQSPVY 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG++ ++IN LA+ A +T +AMAVGS + +F +RQ P ++ Sbjct: 63 INAMTGGSD-WTKQINEKLAVVARETGLAMAVGSTHAALRNPKMADTFNIVRQTNPEGMI 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SN+GA D V+KA Q+V +L A L +H+N QE++ P GN F I + Sbjct: 122 FSNVGA-----DVPVEKALQSVELLEAQALQIHVNSPQELVMPEGNREFVTWMDNIEAIV 176 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG G+S + + G++Y D++GRGGT++ IE+ R D+ Sbjct: 177 NRVDVPVIVKEVGFGMSKETFKSLAEIGVQYVDVSGRGGTNFVDIENERRSNKDMD-YLT 235 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL S Sbjct: 236 QWGQSTVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQSGI 295 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +ES M +L K + L + Sbjct: 296 TNTIEYVESFLNHIKKIMTMLDAKDIDSLTHKDIV 330 >gi|314934406|ref|ZP_07841765.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus caprae C87] gi|313652336|gb|EFS16099.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus caprae C87] Length = 349 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 107/335 (31%), Positives = 172/335 (51%), Gaps = 11/335 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ I D ++ FD +H ++P I+ D+VD + + P+ Sbjct: 5 LREQRKNEHVEIAMSQH--DAHQSDFDKLRFVHHSIPSINVDQVDLTSHTSHFDMQSPVY 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG++ ++IN LA+ A +T +AMAVGS + +F +RQ P ++ Sbjct: 63 INAMTGGSD-WTKQINEKLAVVARETGLAMAVGSTHAALRNPKMADTFNIVRQTNPEGMI 121 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 SN+GA D V+KA Q+V +L A L +H+N QE++ P GN F I + Sbjct: 122 FSNVGA-----DVPVEKALQSVELLEAQALQIHVNSPQELVMPEGNREFVTWMDNIEAIV 176 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG G+S + + G++Y D++GRGGT++ IE+ R D+ Sbjct: 177 NRVDVPVIVKEVGFGMSKETFKSLAEIGVQYVDVSGRGGTNFVDIENERRSNKDMD-YLT 235 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG T SL + Y ++ ASGGLR +D +KS+ LGA G++ PFL S Sbjct: 236 QWGQSTVESLLESTDYQDKLNVFASGGLRTPLDAVKSLALGAKAVGMSRPFLNQVEQSGI 295 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +ES M +L K + L + Sbjct: 296 TNTIEYVESFLNHMKKIMTMLDAKDIDSLTHKDIV 330 >gi|327400498|ref|YP_004341337.1| Isopentenyl-diphosphate delta-isomerase [Archaeoglobus veneficus SNP6] gi|327316006|gb|AEA46622.1| Isopentenyl-diphosphate delta-isomerase [Archaeoglobus veneficus SNP6] Length = 358 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 126/335 (37%), Positives = 193/335 (57%), Gaps = 11/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK+DHI I ++ ++ + F+D L+H ALPE+ F+E+D SVE GKKLS P +I Sbjct: 3 TSNRKLDHIRICLEEE-VESSYTGFEDIMLVHNALPEVDFEEIDTSVEMFGKKLSAPFII 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ + INRNLAIA E+ + M VGSQR D SF + R AP+ + Sbjct: 62 ASMTGGHPD-TKEINRNLAIAVEELGLGMGVGSQRAAIEDEKLADSFTVVRDAAPNAFIY 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G Q+ ++ +AV ++ AD + +HLN LQE+IQP G+ + I + Sbjct: 121 ANVGVAQVKQ--SIEFVEKAVEMIDADAVAIHLNFLQEVIQPEGDVDAKGCIEAIKEVCE 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIV 237 A+ VP+++KE G G+S + G+ D+ G+GGTSWS +E +R + ++G+ Sbjct: 179 AVKVPVIVKETGAGISRSVALKLKEVGVEAIDVGGKGGTSWSGVEVYRTSDIIAKNVGLD 238 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT S+ IA+GG+R+G+D K+I +GA A PFL+PA S Sbjct: 239 FWDWGIPTAFSVVECGDV---LPTIATGGIRSGLDAAKAIAIGAFAASAALPFLRPATQS 295 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ V +E V+MFL G ++++EL Sbjct: 296 AEEVKLELEYFLHGLKVAMFLTGCQKIEELRKAEL 330 >gi|297624390|ref|YP_003705824.1| isopentenyl-diphosphate delta-isomerase, type 2 [Truepera radiovictrix DSM 17093] gi|297165570|gb|ADI15281.1| isopentenyl-diphosphate delta-isomerase, type 2 [Truepera radiovictrix DSM 17093] Length = 344 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 130/335 (38%), Positives = 188/335 (56%), Gaps = 1/335 (0%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+ H+ + P F+ + L +RALPE +D FLGK L+ PLLI Sbjct: 10 LEARKLKHLEVCLHYPVEFERTTGFERFELPYRALPESDLSRIDLRTRFLGKPLAAPLLI 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + INR+LA AA++ + + +GSQRVM A+ SF++R+YAP +LI Sbjct: 70 GAMTGGAARAA-LINRHLAEAAQRLGIGLMLGSQRVMLEHPEALASFQVRRYAPEALLIG 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QLN +G + +AV ++ AD L LH NPLQE +QP G+ +F+ L K+ L Sbjct: 129 NLGVAQLNKGYGAAELTRAVSLIQADALALHTNPLQEALQPGGDADFSALVPKLHALVPE 188 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+LLKEVG GLS +G D+AG GGTSW+++E + +W Sbjct: 189 LPFPVLLKEVGHGLSPAVAAAVEGAGFAALDVAGAGGTSWAKVELYARYGELRHPELAEW 248 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 GIPT +L R E +ASGG+R G+D K++ +GA + LA P L PA++S++AV Sbjct: 249 GIPTADALLGVRRALPEMPLVASGGVRTGLDAAKALAMGAQVVALARPLLAPALESAEAV 308 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 VA +++L E V+M G + L L R Sbjct: 309 VAHLKTLLWELRVAMHCAGASDLAALARTELLPRR 343 >gi|72536081|gb|AAZ73146.1| isopentenyl pyrophosphate isomerase [Enterobacteriaceae bacterium DC413] Length = 344 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 124/335 (37%), Positives = 194/335 (57%), Gaps = 7/335 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH++IV ++ F WH H ALPE+ D++D + + P LI Sbjct: 6 LTKRKNDHLDIVLRNTAPASGS--FARWHFTHCALPELHLDQIDLRTRLFDRPMQAPFLI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTVLI 120 SSMTGG + + IN +LA AA+ +A+ VGSQRV D+++ + +LR+ AP L+ Sbjct: 64 SSMTGGAARAL-SINHHLAEAAQTLGLALGVGSQRVALESDNDSGLTRDLRRIAPDIPLL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA Q+ + G + A AV ++ AD L +HLNPLQE +Q G+ ++ + IA L Sbjct: 123 ANLGAAQILGEQGRRLARNAVSMIEADALIVHLNPLQEALQRGGDRDWRGVLQAIAQLVK 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 +++VP+++KEVG G+S+ + ++G+ DIAG GGTSW+ +E R + + + Sbjct: 183 SLEVPVVVKEVGAGISAEVAQRLAEAGVSMIDIAGAGGTSWAAVEGERASTPQQRAVAMA 242 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT +L R IASGG+R+G+D K++ LGA + G A+ L A+ S Sbjct: 243 FASWGIPTDEALRAVRDRLPAIPLIASGGIRDGIDAAKALRLGADIVGQAAAVLSSALHS 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +DAVVA +L ++ V+ F G+ +++L L Sbjct: 303 TDAVVAHFNTLIEQLRVACFCTGSANLRQLRLAPL 337 >gi|288905464|ref|YP_003430686.1| isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus UCN34] gi|288732190|emb|CBI13755.1| putative isopentenyl-diphosphate delta-isomerase [Streptococcus gallolyticus UCN34] Length = 332 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 15/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MI-NRKDEHIKYALKY---QSPYNSFDDMELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + S+ ++ P +L Sbjct: 57 INAMTGGSEK-GRAVNQKLAQIAQATGLVMVTGSYSAALKNP-HDDSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + Q +H + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-----IDKPYELGLQTIHEIQPIFLQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M VP++LKEVG G+ IE K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPVPIILKEVGFGMDLKTIEEAHKLGIKTVDISGRGGTSFAYIENQRGHNR---SYLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIVKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I + + + M L K + EL L+ + Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAELRQVDYLLYGK 324 >gi|251782247|ref|YP_002996549.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390876|dbj|BAH81335.1| isopentenyl pyrophosphate isomerase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 330 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP +++ S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNAFDDMELIHHSLPSYDVADINLSTHFAGQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A T + M GS + N S+ L + A L + Sbjct: 58 NAMTGGSQK-GKAVNEKLAKVAAATGIVMVTGSYSAALKNPNDA-SYRLHEVAEGLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V++ Q V + L +H+N +QE++ P G F +A +S Sbjct: 116 NIG-----LDKPVERGQQTVKEMNPLFLQVHVNVMQELLMPEGERVFRTWKQHLADYASQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I++ + GI+ FDI+GRGGTS++ IE+ R L+ DW Sbjct: 171 IRVPIILKEVGFGMDVSTIKIAHELGIQTFDISGRGGTSFAYIENQRGLDR---SYLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T L A+ + + +ASGG+R+ +D++K ++LGA GL+ L+ + Sbjct: 228 GQTTVQCLLNAQGLLDHVEILASGGVRHPLDMIKCLVLGARAVGLSRTVLELVEKYPVER 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ + +++ + M L + +Q+L L+ + Sbjct: 288 VIDIVNGWKEDLKLIMCALDCRTIQDLRQVDYLLYGR 324 >gi|324992166|gb|EGC24088.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK405] gi|327459482|gb|EGF05828.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1] gi|327472890|gb|EGF18317.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK408] gi|327490681|gb|EGF22462.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1058] Length = 335 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 113/338 (33%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ LIHR+LP+ E+D S F G+ +FP Sbjct: 2 MSQNRKDDHIKYALEQRL---GYNSFDEMELIHRSLPKYDLAEIDLSTHFAGRDWAFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGLPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQHLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VPL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLEVPLILKEVGFGMDRSTVEEARFFGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLVMCALSCRNLQELKSVPYLLYGR 326 >gi|306833697|ref|ZP_07466824.1| isopentenyl-diphosphate delta-isomerase [Streptococcus bovis ATCC 700338] gi|304424467|gb|EFM27606.1| isopentenyl-diphosphate delta-isomerase [Streptococcus bovis ATCC 700338] Length = 332 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 15/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI K FDD LIH +LP+ E+D F G+ FP Sbjct: 1 MI-NRKDEHIKYALKY---QSPYNSFDDIELIHHSLPDYDLSEIDLHTHFAGRDFEFPFY 56 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +N+ LA A+ T + M GS + S+ ++ P +L Sbjct: 57 INAMTGGSEK-GRAVNQKLAQIAQATGLVMVTGSYSAALKNP-HDDSYPSKEEFPELLLA 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D + Q +H + L +H+N +QE++ P G F +A ++ Sbjct: 115 TNIG-----IDKPYELGLQTIHEMQPIFLQVHVNLMQELLMPEGEREFRQWKENLADYAT 169 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 M P++LKEVG G+ IE+ K GI+ DI+GRGGTS++ IE+ R + Sbjct: 170 KMPAPVILKEVGFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNR---SYLDE 226 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T +L A+P ++ + +ASGG+R+ +DI+K ++LGA G++ L+ S + Sbjct: 227 WGQSTVQTLLNAQPMIDKIEILASGGVRHPLDIIKCLVLGAKAVGVSRAILELVEKYSVE 286 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I + + + M L K + EL L+ + Sbjct: 287 EVITIINGWKDDLRLIMCALNCKTIAELRQVDYLLYGK 324 >gi|322819252|gb|EFZ26432.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 356 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 196/339 (57%), Gaps = 9/339 (2%) Query: 1 MVNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 +V RK DHI+I ++ + + + ALPEIS ++D EF+G LSFP Sbjct: 12 IVRRRKKDHIDICLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 +ISSMTGG + IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 72 FIISSMTGG-EEHGRIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSVP 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TNF L K+ L Sbjct: 131 MFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTNFESLLHKLEEL 190 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 ++VP+++K VG G+ + + G++Y D++G GGTSW+ IE R + ++ Sbjct: 191 LPHINVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIEGWRHPDLPDDQNL 250 Query: 235 GIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D GI T SL+ P ++ + IA GG+R G+D+ KS+++GA A PFLK Sbjct: 251 GYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDVAKSLMMGAECATAALPFLK 310 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A++S + V I+ +KE IV+MF G ++EL Sbjct: 311 AALESPERVRGVIQRFKKELIVAMFACGASTIEELRKMP 349 >gi|76798613|ref|ZP_00780841.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae 18RS21] gi|76586047|gb|EAO62577.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae 18RS21] Length = 331 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 162/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS + S+ P L + Sbjct: 58 NAMTGGSEK-GKAVNHKLAQVAQATGIVMVTGSYSAALKNDE-DDSYPTTDLYPDLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V A V + L +H+N +QE++ P G F S + Sbjct: 116 NIG-----LDKPVPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + W Sbjct: 171 IQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDR---SYLNTW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDD 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + S +++ + M L K++ +L ++ Q Sbjct: 288 VIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQ 324 >gi|222152929|ref|YP_002562106.1| isopentenyl pyrophosphate isomerase [Streptococcus uberis 0140J] gi|222113742|emb|CAR41738.1| isopentenyl-diphosphate delta-isomerase [Streptococcus uberis 0140J] Length = 330 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ DE++ S + + FP I Sbjct: 1 MTNRKNDHIKYALKY---QSSYNSFDDMELIHSSLPKYDVDEIELSTHYAQQDFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS + S+ L+ AP+ L + Sbjct: 58 NAMTGGSEK-GKAVNAKLARVAQATGIPMVTGSYSAALKNP-QDDSYRLKDIAPNLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D + Q V + L +H+N +QE++ P G F + + Sbjct: 116 NIG-----LDKDICLGMQTVSEMNPIFLQVHVNVMQELLMPEGERQFKHWRQHLKEYAEQ 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ I+ GI+ FDI+GRGGTS++ IE+ R W Sbjct: 171 IPVPIILKEVGFGMDVKTIQTAQALGIQTFDISGRGGTSFAYIENQRGGNR---SYLDQW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 G T L + N+ + +ASGG+R+ +D++K +LGA GL+ FL+ + Sbjct: 228 GQSTVQCLLNCKDLVNQVEILASGGVRHPLDMIKCFVLGARAVGLSRTFLELVETYHEEE 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ I +++ M L K + +L L+ + Sbjct: 288 VIEIINGWKEDLKRIMCALNCKTIADLREVDYLLYGR 324 >gi|22537470|ref|NP_688321.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae 2603V/R] gi|77409182|ref|ZP_00785894.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae COH1] gi|22534348|gb|AAN00194.1|AE014252_17 isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 2603V/R] gi|77172228|gb|EAO75385.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae COH1] Length = 331 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K + FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSHYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS + S+ P L + Sbjct: 58 NAMTGGSEK-GKAVNHKLAQVAQATGIVMVTGSYSAALKNDE-DDSYPTTDLYPDLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V A V + L +H+N +QE++ P G F S + Sbjct: 116 NIG-----LDKPVPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + W Sbjct: 171 IQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDR---SYLNTW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDD 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + S +++ + M L K++ +L ++ Q Sbjct: 288 VIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQ 324 >gi|212638921|ref|YP_002315441.1| isopentenyl pyrophosphate isomerase [Anoxybacillus flavithermus WK1] gi|212560401|gb|ACJ33456.1| Isopentenyl diphosphate isomerase [Anoxybacillus flavithermus WK1] Length = 354 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 173/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+ HI R F+D +H +LP IS +D + L P+ I+ Sbjct: 8 AKRKLQHIEYALATG--QRRLHGFEDVTFVHNSLPNISTAHIDLQTKIGELSLRSPIFIN 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG +IN LA A + +AMAVGSQ D +SF + RQ ++ + Sbjct: 66 AMTGGGGAETTKINEQLAYVANEYGLAMAVGSQMAALKDERERQSFTIIRQVNKRGMVFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V +A +AV ++ A+ L +HLN +QE++ P G+ NF S+I + SA Sbjct: 126 NLGS-----EATVDEAKRAVDMIEANALQIHLNVVQELVMPEGDRNFCGALSRIEQIVSA 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S G+ D+ G GGT++++IE+ R + F +W Sbjct: 181 VDVPVIVKEVGFGMSKETARKLEDIGVCAVDVGGFGGTNFAQIENKRREKQ--LSYFNEW 238 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ I SGG+++ +D+ K + LGAS G+A L+ ++ +A Sbjct: 239 GITTTASIAEVASEVQRISIIGSGGVQHALDVAKCVALGASAVGMAGYMLRLLIEQGVEA 298 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++A I L ++ V M LGT+ + +L +I + Sbjct: 299 LIAEINQLHEDLTVIMTALGTRTIFDLQKVPVVITGK 335 >gi|25011435|ref|NP_735830.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae NEM316] gi|77411179|ref|ZP_00787531.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae CJB111] gi|24412973|emb|CAD47052.1| Unknown [Streptococcus agalactiae NEM316] gi|77162797|gb|EAO73756.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae CJB111] Length = 331 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + MA GS + S+ P L + Sbjct: 58 NAMTGGSEK-GKAVNHKLAQVAQATGIVMATGSYSAALKNDE-DDSYPTTDLYPDLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D + A V + L +H+N +QE++ P G F S + Sbjct: 116 NIG-----LDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + W Sbjct: 171 IQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDR---SYLNTW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDD 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + S +++ + M L K++ +L ++ Q Sbjct: 288 VIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQ 324 >gi|268325057|emb|CBH38645.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon] Length = 371 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 127/350 (36%), Positives = 189/350 (54%), Gaps = 17/350 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+ + I + ++ F D L+H ALPE+ + +D EFLG +P++I Sbjct: 4 TSRRKIEQLQICTEKE-VEAGVNCFADVKLVHVALPELDKEAIDLKTEFLGFPFQYPIMI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ ++N LA AAE + M VGSQR SF + R AP + Sbjct: 63 ASMTGGHPD-TRKVNIVLAEAAETLGIGMGVGSQRAALEGTELEDSFRVVRDVAPDLFIY 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QL ++GV+ + + ++GAD + +HLN LQE IQP GN + + + I + Sbjct: 122 ANLGAPQLK-EYGVEGVERVIEMIGADAIAIHLNFLQEAIQPEGNVDASGCLAAITEVCE 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 A+ P+++KE G G+S +L SG+ D+ G GGTS + E +R +L + + Sbjct: 181 AIKKPVIVKETGAGISYTMAKLLHGSGVSAIDVGGLGGTSLAAAEIYRANAEGDELGAHL 240 Query: 235 GIVF-QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 G +F +WGI T S+ R IA+GG+RNG+DI K+I LG+ + A PFLKP Sbjct: 241 GNLFGWNWGISTVESIVECRALPFTIPIIATGGIRNGLDIAKAIALGSDMCSAALPFLKP 300 Query: 294 AMDSS------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AM+S D VVA I +E V+MFL G K +L +I + Sbjct: 301 AMESGSIKSSVDKVVAKITEFSEELKVAMFLTGCKNTMDLKDAELVITGE 350 >gi|319893308|ref|YP_004150183.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Staphylococcus pseudintermedius HKU10-03] gi|317163004|gb|ADV06547.1| Isopentenyl-diphosphate delta-isomerase, FMN- dependent [Staphylococcus pseudintermedius HKU10-03] Length = 343 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 102/333 (30%), Positives = 175/333 (52%), Gaps = 11/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + D + FD +H A+PE++ DEV F +S L I+ Sbjct: 6 EQRKNEHVRLALAQS--DTLQSDFDRIQFVHHAIPEMNVDEVTLLPNFKALHMSHVLYIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++ N LA A+ T++ MAVGS + S+ + R+ P + + Sbjct: 64 AMTGGSEWTVKT-NEQLAQVAKATQIPMAVGSMHAALKNPAVRHSYTVAREQYPEGQIWA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ A D +++A A+ ++ A+ L +H+N QE++ P GN F ++I+ + Sbjct: 123 NVSA-----DVTLEEAQAAIEMIHANALQIHVNAPQELVMPEGNRQFKHWLTRISEIIKG 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S I+ + G+ Y DI+G GGT++ IE+ R D+G +DW Sbjct: 178 VEVPVIVKEVGFGMSYDTIQQLIDVGVSYVDISGHGGTNFISIENERRQFKDMG-YLKDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G T +SL AR + +ASGG+R+ +D +K++ LGA G++ P LK + +A Sbjct: 237 GQSTVVSLLEARNLSSRVHVLASGGIRHPLDAIKALRLGAEAVGMSRPILKILHEEGVEA 296 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +E + + M LL K + EL + Sbjct: 297 TIEYVEDFKTQMAYIMTLLNAKNITELRQAAIV 329 >gi|242243849|ref|ZP_04798293.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis W23144] gi|242232693|gb|EES35005.1| isopentenyl pyrophosphate isomerase [Staphylococcus epidermidis W23144] gi|319401642|gb|EFV89851.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus epidermidis FRI909] Length = 349 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I +VD + L++P+ I+ Sbjct: 7 EQRKNEHVEIAMSQK--DALVSDFDKVRFVHHSIPSIDVSQVDMTSHTTKFDLAYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG++ ++IN LAI A +T +AMAVGS + N I++F +R+ P + S Sbjct: 65 AMTGGSD-WTKQINEKLAIVARETGIAMAVGSTHAALRNPNMIETFSIVRKTNPKGTIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA QAV +L A L +H+N QE++ P GN FA S I + Sbjct: 124 NVGA-----DVPVDKALQAVELLDAQALQIHVNSPQELVMPEGNREFASWMSNIESIVKR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S ++ G+ Y D++GRGGT++ IE+ R D+ W Sbjct: 179 VDVPVIIKEVGFGMSKETLQALHDIGVNYVDVSGRGGTNFVDIENERRSNKDMN-YLSQW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL + + + ASGGLR +D +K + LGA G++ PFL S Sbjct: 238 GQSTVESLLESTEFQDRLNIFASGGLRTPLDAVKCLALGAKAIGMSRPFLNQVEQSGITN 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +ES + M +L ++ L ++ + Sbjct: 298 TIDYVESFIQHMKKIMTMLDAPNIECLRQADIVMSPE 334 >gi|323463645|gb|ADX75798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus pseudintermedius ED99] Length = 343 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 11/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + D + FD +H A+PE+ DEV F +S L I+ Sbjct: 6 EQRKNEHVRLALAQS--DTLQSDFDRIQFVHHAIPEMDVDEVTLLPNFKALHMSHVLYIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++ N LA A+ T++ MAVGS + S+ + R+ P + + Sbjct: 64 AMTGGSEWTVKT-NEQLAQVAKATQIPMAVGSMHAALKNPAVRHSYAVAREQYPEGQIWA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ A D +++A A+ ++ A+ L +H+N QE++ P GN F ++I+ + Sbjct: 123 NVSA-----DVTLEEAQAAIEMIHANALQIHVNAPQELVMPEGNRQFKHWLTRISEIIKG 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S I+ + G+ Y DI+G GGT++ IE+ R D+G +DW Sbjct: 178 VEVPVIVKEVGFGMSYDTIQQLIDVGVSYVDISGHGGTNFISIENERRQFKDMG-YLKDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G T +SL AR + +ASGG+R+ +D +K++ LGA G++ P LK + +A Sbjct: 237 GQSTVVSLLEARNLSSRVHVLASGGIRHPLDAIKALRLGAEAVGMSRPILKMLHEEGVEA 296 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +E + + M LL K + EL + Sbjct: 297 TIEYVEDFKTQMAYIMTLLNAKNITELRQAAIV 329 >gi|73661865|ref|YP_300646.1| isopentenyl pyrophosphate isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|91207078|sp|Q49ZS3|IDI2_STAS1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|72494380|dbj|BAE17701.1| isopentenyl diphosphate isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 347 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 11/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD+ +H ++P + D++D + + L PL I+ Sbjct: 7 EQRKNEHVEIAMAQG--DATISDFDEIRFVHHSIPSVDVDDIDLTSQLKDFTLDQPLYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ ++IN LA+ A +T +AMAVGS + SF +R P+ ++ S Sbjct: 65 AMTGGSE-WTKQINEKLAVIARETGIAMAVGSTHAALRNSKMASSFSIVRDTNPNGIIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA ++V +L A L +H+N QE++ P GN F+ +A + S Sbjct: 124 NVGA-----DVPVDKAVESVKLLDAQALQVHVNAPQELVMPEGNRTFSTWMENLAQIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S I+ + G+RY D++GRGGT++ IE+ R D+ W Sbjct: 179 VDVPVIVKEVGFGMSKETIKSLNEIGVRYVDVSGRGGTNFVDIENERRTYKDMD-YLGLW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL + Y + +ASGG+R +D +K + LGAS G++ PFL + Sbjct: 238 GQTTVESLLESASYQQDMDILASGGVRTPLDAVKCLALGASAVGMSRPFLNQVENYGITE 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + E M +L K +++L + Sbjct: 298 TLNYTEQFTDHMKKIMTMLDVKTIKDLKQTQMV 330 >gi|76788146|ref|YP_329964.1| isopentenyl pyrophosphate isomerase [Streptococcus agalactiae A909] gi|77406860|ref|ZP_00783888.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae H36B] gi|77414068|ref|ZP_00790237.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 515] gi|76563203|gb|ABA45787.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus agalactiae A909] gi|77159866|gb|EAO71008.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae 515] gi|77174533|gb|EAO77374.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae H36B] Length = 331 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + MA GS + S+ P L + Sbjct: 58 NAMTGGSEK-GKAVNHKLAQVAQATGIVMATGSYSAALKNDE-DDSYPTTDLYPDLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D + A V + L +H+N +QE++ P G F S + Sbjct: 116 NIG-----LDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + W Sbjct: 171 IQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDR---SYLNTW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRAVLELVERYPVDD 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + S +++ + M L K++ +L ++ Q Sbjct: 288 VIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQ 324 >gi|154345365|ref|XP_001568624.1| isomerase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065961|emb|CAM43744.1| putative isopentenyl-diphosphate delta-isomerase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 357 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 133/340 (39%), Positives = 202/340 (59%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDR--NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 V RK DHI+I + R + + + L ++ALPE+ ++D S EF+GK++SFP Sbjct: 14 VQKRKKDHIDICLRKNVEPRKGSTSIWSKYTLPYKALPEVDLRKIDTSCEFMGKRISFPF 73 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG IN NLA A E K+ +GS R++ +A+ +F +++ P + Sbjct: 74 LISSMTGG-EAHGRVINENLAKACEVEKIPFGLGSMRIINRYASAVHTFNVKELCPSVPM 132 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+G VQLNY FG ++ + V + ADGL +HLN QE QP G+TNF L K+ L Sbjct: 133 LANIGLVQLNYGFGPKEVNNLVDSVRADGLCIHLNHTQEACQPEGDTNFEGLIEKLRQLL 192 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIG 235 + VP+L+K VG G+ + SG++Y D++G GGTSW+ IE R E +IG Sbjct: 193 PHIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKVEEENIG 252 Query: 236 IVFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +F+D G+PT + L + P + IA GG+RNG+D+ K++++GAS A PFL Sbjct: 253 YLFRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKTLMMGASYATAAMPFLAA 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++SS+AV A I+ +R+E +SMF G + ++EL + Sbjct: 313 ALESSEAVRAVIQRMRQELRISMFTCGARNIEELRRMRVI 352 >gi|75763038|ref|ZP_00742827.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896528|ref|YP_002444939.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus G9842] gi|228900179|ref|ZP_04064411.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 4222] gi|228907230|ref|ZP_04071091.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 200] gi|226707313|sp|B7IP77|IDI2_BACC2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|74489470|gb|EAO52897.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544905|gb|ACK97299.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus G9842] gi|228852451|gb|EEM97244.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 200] gi|228859449|gb|EEN03877.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis IBL 4222] Length = 349 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|324994262|gb|EGC26176.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK678] gi|325697897|gb|EGD39781.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK160] Length = 335 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 113/338 (33%), Positives = 172/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ LIHR+LP+ E+D S F G+ +FP Sbjct: 2 MSQNRKDDHIKYALEQRL---GYNSFDEMELIHRSLPKYDLAEIDLSTHFAGRDWAFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGLPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F +A S Sbjct: 117 TNIG-----LDKPYQAAQQAVADLQPLFLQVHVNLMQELLMPEGEREFRSWRQYLADYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VPL+LKEVG G+ +E GI+ FDI+GRGGTS++ IE+ R D D Sbjct: 172 RLEVPLILKEVGFGMDRSTVEEARFFGIQTFDISGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL +P +E + +ASGG+R+ +DI+K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQPLRDEVELLASGGVRHPLDIIKALVLGAKSVGLSRAMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKSVPYLLYGR 326 >gi|190894248|ref|YP_001984542.1| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CIAT 652] gi|190699909|gb|ACE93992.1| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CIAT 652] Length = 377 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 196/337 (58%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+++V ++ H ALPE+ +++ LGK + PLL Sbjct: 28 LTRRKDDHLDLVLDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAPLL 87 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP L Sbjct: 88 ISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDIPL 146 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A + Sbjct: 147 LANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVARAA 206 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 ++ VP++ KEVG GLS+ +++G+ D+AG GGTSW+ +E R + + + Sbjct: 207 RSVGVPIVAKEVGWGLSASVACALVEAGVEVIDVAGAGGTSWAAVEGERARDAAGRAVAM 266 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPTP SL+ R + IASGG+R+GVD+ K+I LGA + G A+ L A Sbjct: 267 AFADWGIPTPASLQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAATV 326 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S++AVVA E + ++ V+ F G+ + L L Sbjct: 327 STEAVVAHFEVVIRQLAVACFCTGSPDLATLRQARLL 363 >gi|153831546|ref|ZP_01984213.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio harveyi HY01] gi|148872056|gb|EDL70873.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio harveyi HY01] Length = 339 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 130/336 (38%), Positives = 187/336 (55%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ VD S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAVDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQRV D ++ +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGKTIRDLAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 124 SNLGAAQLRDKQRFDNAQRAVDFIQADALFVHLNPMQEAFQQNGDHDWIGVLKSIEQLKQ 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 +DVP+++KEVG G+S + + +++G+ D+AG GGTSWS +E + ++ + + Sbjct: 184 RVDVPMIIKEVGFGISGVVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT LE R + IASGG+ NG+++ K++ LGA+L G A LK A S Sbjct: 244 FRDWGIPTAKCLEQIRGQYPDLPLIASGGVYNGLEVAKAVHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++++V E + E ++ F G+ +Q L L Sbjct: 304 TESIVEHFEQMALELRLACFGTGSANLQALTQARRL 339 >gi|206970784|ref|ZP_03231736.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1134] gi|228951975|ref|ZP_04114072.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069151|ref|ZP_04202442.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus F65185] gi|229178006|ref|ZP_04305378.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 172560W] gi|206734420|gb|EDZ51590.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1134] gi|228605494|gb|EEK62943.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 172560W] gi|228713903|gb|EEL65787.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus F65185] gi|228807700|gb|EEM54222.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 349 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPIIVKEVGFGMSKETVQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|284167369|ref|YP_003405647.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haloterrigena turkmenica DSM 5511] gi|284017024|gb|ADB62974.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haloterrigena turkmenica DSM 5511] Length = 360 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 136/345 (39%), Positives = 202/345 (58%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DHI IV ++ ++ F+D L+H ALPE+ +D +D SVEFL +LS P+ I Sbjct: 9 TEDRKDDHIRIV-QERDVETTGTGFEDVQLVHEALPELHYDAIDTSVEFLDHELSAPIFI 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTV 118 SMTGG+ E INR LA AA +T +AM +GSQR D+ ++S+ + R AP Sbjct: 68 ESMTGGHQNTTE-INRALARAAGETGIAMGLGSQRAGLELDDNGVLESYTVVRDAAPDAF 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + D + I + Sbjct: 127 IYGNLGAAQLR-EYDLETVERAVEMIEADALAVHLNFLQEAVQPEGDVDGRDCLAAIKRV 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ES 232 + VP+++KE G G+S + G+ D+AG+GGT+WS IE++R + Sbjct: 186 VEDLSVPIIVKETGNGISGETARKLSEVGVDAIDVAGKGGTTWSGIEAYRAAAANAPRQK 245 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 IG +F++WGIPT S IASGG+R G+D+ K+I LGA GGLA PFL Sbjct: 246 RIGALFREWGIPTAASTTEC--VAEHDCVIASGGVRTGLDVAKAIALGALAGGLAKPFLN 303 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA + SDAV+ +E L E +MF+ G+K + +L +++ + Sbjct: 304 PATNGSDAVIERVEDLIAELRTAMFVTGSKSIPDLQHTEYVLQGE 348 >gi|126656673|ref|ZP_01727887.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. CCY0110] gi|126621893|gb|EAZ92601.1| isopentenyl pyrophosphate isomerase [Cyanothece sp. CCY0110] Length = 354 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 142/336 (42%), Positives = 198/336 (58%), Gaps = 5/336 (1%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ +RK DH+NIV ++ + F+ + + H ALP++ D+VD S++ GK L PL Sbjct: 15 LIENRKADHLNIVLQEDVAGKGITTGFEQFLIEHDALPDVDLDDVDLSLQLWGKTLQAPL 74 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LISSMTGG + IN NLA AA+ +AM VGSQR N K++++RQ AP+ +L Sbjct: 75 LISSMTGGTD-SAHIINLNLAEAAQALGIAMGVGSQRAAIEQPNLGKTYKIRQVAPNILL 133 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGAVQLNY +G+ +A +AV ++ AD L LHLNPLQE +Q G+ N+ L KIA ++ Sbjct: 134 FANLGAVQLNYGYGIDEAKKAVDMIEADALILHLNPLQEAVQAEGDRNWKGLYDKIATVA 193 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 + ++VP++ KEVG G+S G+ DIAG GGTSWS +E++R + I Sbjct: 194 TQLEVPIIAKEVGNGISGKVARRLADCGVSAIDIAGAGGTSWSEVEAYRQHDPRRRQIAH 253 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +SL R E ASGG+RNG+D K+I LGASL G A+P L A Sbjct: 254 CFAGWGIPTAMSLMQVREAVPELPVFASGGIRNGIDAAKAIALGASLVGSAAPLLDAATH 313 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S AV L + ++ F G + EL T Sbjct: 314 QSQAVYDKFSILLETLKIATFCAGVSNLTELKQVTL 349 >gi|288556074|ref|YP_003428009.1| isopentenyl pyrophosphate isomerase [Bacillus pseudofirmus OF4] gi|288547234|gb|ADC51117.1| isopentenyl pyrophosphate isomerase [Bacillus pseudofirmus OF4] Length = 349 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 176/334 (52%), Gaps = 11/334 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F+ +H ++P+ DEVD S E G LS P+ I+ Sbjct: 4 AKRKLDHIEHALSSG--QERTHGFEHIRFVHNSIPDAFVDEVDYSSEIGGLSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + + IN+ LA A + + +AVGSQ D KS+E +RQ P+ V+ + Sbjct: 62 AMTGGGGERTKMINQQLAEVASECGIGIAVGSQMAAIRDPEERKSYEIVRQTHPNGVVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +A +AV +L A L +HLN +QE++ P G+ +F ++I + A Sbjct: 122 NLGS-----EATADQAKRAVDMLQASALQIHLNVIQELVMPEGDRDFRHTLTRIEKIKDA 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVPL++KEVG G+S E G++ D+ G GGT++SRIE+ R F DW Sbjct: 177 IDVPLIIKEVGYGMSRETAETLASIGVQMIDVGGFGGTNFSRIENARRERK--LSYFDDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ I+SGGL++ +D++KSI LGA G A FLK M + +A Sbjct: 235 GINTTSSIIEVTEAAKGISVISSGGLQSALDVVKSIALGADATGFAGYFLKILMEEGQNA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ I + K+ + M LG + EL +I Sbjct: 295 LIEEINFIHKDIKMLMTALGASSLSELKEVPLVI 328 >gi|55820641|ref|YP_139083.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus LMG 18311] gi|55822532|ref|YP_140973.1| isopentenyl pyrophosphate isomerase [Streptococcus thermophilus CNRZ1066] gi|55736626|gb|AAV60268.1| isopentenyl diphosphate isomerase [Streptococcus thermophilus LMG 18311] gi|55738517|gb|AAV62158.1| isopentenyl diphosphate isomerase [Streptococcus thermophilus CNRZ1066] Length = 335 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 164/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH++LP D++D S F G+ FP I Sbjct: 1 MTNRKDDHIRYALKY---QSPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K +NR LA A +T + M GS A +SF+ R P L + Sbjct: 58 NAMTGGSAK-GGAVNRKLAEVASRTGILMVTGSYSAALK-GEAPESFDYRNEFPDLDLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V + L LH+N +QE++ P G F + + Sbjct: 116 NIG-----VDKSVDLGIKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVVAYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL+LKEVG G+ I + GI+ DI+GRGGTS++ IE+ R D DW Sbjct: 171 IEVPLVLKEVGFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNCD---YLNDW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L A+ E + +ASGG+RN +D++K ++LGA GL+ L+ D Sbjct: 228 GQSTVQTLLQAQDLREEVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VVA + + + + M L V EL ++ + Sbjct: 288 VVAIVNGWKDDLRLIMCALDCCTVDELKSVDYILYGK 324 >gi|71745166|ref|XP_827213.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma brucei TREU927] gi|70831378|gb|EAN76883.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma brucei] Length = 356 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 129/340 (37%), Positives = 193/340 (56%), Gaps = 9/340 (2%) Query: 4 DRKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DHINI K + +D + + + ALPEI+ +D F+G+ LSFP +I Sbjct: 15 DRKKDHINICLKRNVEPYKNGRSIWDKYVVPYTALPEINMANIDTRCSFMGRSLSFPFII 74 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG IN +LA A E + VGS RV+ A+ +F+++Q+ P + + Sbjct: 75 SSMTGG-ESHGRTINMSLAQACEAEGIPFGVGSMRVVNRYPAAVHTFDVKQFCPSVQMFA 133 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G VQLNY FG ++ + + ADGLF+HLN QE QP G+TNF +L K+ L Sbjct: 134 NIGLVQLNYGFGAADVNRLIECVKADGLFIHLNHTQEACQPEGDTNFENLLEKLKALLPQ 193 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIGIV 237 + VP+++K VG G+ + ++G++Y D++G GGTSW+ IE R E ++G + Sbjct: 194 VKVPVIVKGVGHGIDYESVVALQRAGVKYIDVSGCGGTSWAWIEGRRHPYTVEEENLGFI 253 Query: 238 FQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F+D G+ T L P + IA GG+R G+DI KS+++GA A PFLK A+ Sbjct: 254 FRDVGVTTDQCLTECAPLAKKGGLHLIAGGGIRTGLDIAKSLMMGAECATAALPFLKAAL 313 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +AV I+ LR+E +V+MF G K + L + +R Sbjct: 314 EGPEAVRKVIQRLRRELVVAMFACGVKDIASLRRKSLRLR 353 >gi|56292021|emb|CAI29176.1| isopentenyl-pyrophosphate isomerase [Trypanosoma brucei brucei] gi|261331428|emb|CBH14422.1| isomerase, putative [Trypanosoma brucei gambiense DAL972] Length = 356 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 9/340 (2%) Query: 4 DRKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK DHINI K + +D + + + ALPEI+ +D F+G+ LSFP +I Sbjct: 15 DRKKDHINICLKRNVEPYKNGRSIWDKYVVPYTALPEINMANIDTRCSFMGRSLSFPFII 74 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG IN +LA A E + VGS RV+ A+ +F+++Q+ P + + Sbjct: 75 SSMTGG-ESHGRTINMSLAQACEAEGIPFGVGSMRVVNRYPAAVHTFDVKQFCPSVQMFA 133 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G VQLNY FG ++ + + ADGLF+HLN QE QP G+TNF +L K+ +L Sbjct: 134 NIGLVQLNYGFGAADVNRLIECVKADGLFIHLNHTQEACQPEGDTNFENLLEKLKVLLPQ 193 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDIGIV 237 + VP+++K VG G+ + ++G++Y D++G GGTSW+ IE R E ++G + Sbjct: 194 VKVPVIVKGVGHGIDYESVVALQRAGVKYIDVSGCGGTSWAWIEGRRHPYTVEEENLGFI 253 Query: 238 FQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F+D G+ T L P + IA GG+R G+DI KS+++GA A PFLK A+ Sbjct: 254 FRDVGVTTDQCLTECAPLAKKGGLHLIAGGGIRTGLDIAKSLMMGAECATAALPFLKAAL 313 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +AV I+ LR+E +V+MF G K + L + +R Sbjct: 314 EGPEAVRKVIQRLRRELVVAMFACGVKDIASLRRKSLRLR 353 >gi|30261594|ref|NP_843971.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Ames] gi|47526794|ref|YP_018143.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184426|ref|YP_027678.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Sterne] gi|65318865|ref|ZP_00391824.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Bacillus anthracis str. A2012] gi|165869327|ref|ZP_02213986.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0488] gi|167633178|ref|ZP_02391503.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0442] gi|167639050|ref|ZP_02397323.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0193] gi|170686131|ref|ZP_02877353.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0465] gi|170706579|ref|ZP_02897039.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0389] gi|177650567|ref|ZP_02933534.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0174] gi|190568619|ref|ZP_03021524.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis Tsiankovskii-I] gi|227815654|ref|YP_002815663.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. CDC 684] gi|229603754|ref|YP_002866002.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0248] gi|254683086|ref|ZP_05146947.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. CNEVA-9066] gi|254723674|ref|ZP_05185460.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. A1055] gi|254733535|ref|ZP_05191256.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Western North America USA6153] gi|254740846|ref|ZP_05198534.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Kruger B] gi|254755084|ref|ZP_05207118.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Vollum] gi|254759621|ref|ZP_05211645.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis str. Australia 94] gi|81582874|sp|Q81SX4|IDI2_BACAN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803421|sp|C3P586|IDI2_BACAA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803422|sp|C3L9F9|IDI2_BACAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|30255448|gb|AAP25457.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Ames] gi|47501942|gb|AAT30618.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178353|gb|AAT53729.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. Sterne] gi|164714767|gb|EDR20285.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0488] gi|167512840|gb|EDR88213.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0193] gi|167531216|gb|EDR93894.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0442] gi|170128677|gb|EDS97544.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0389] gi|170669828|gb|EDT20569.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0465] gi|172083711|gb|EDT68771.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0174] gi|190560219|gb|EDV14199.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis Tsiankovskii-I] gi|227002477|gb|ACP12220.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. CDC 684] gi|229268162|gb|ACQ49799.1| isopentenyl-diphosphate delta-isomerase [Bacillus anthracis str. A0248] Length = 349 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIEFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEEIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|228938710|ref|ZP_04101314.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971592|ref|ZP_04132215.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978202|ref|ZP_04138579.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis Bt407] gi|228781219|gb|EEM29420.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis Bt407] gi|228788115|gb|EEM36071.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820951|gb|EEM66972.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939216|gb|AEA15112.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 349 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D N S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDENEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKIPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|88604121|ref|YP_504299.1| isopentenyl pyrophosphate isomerase [Methanospirillum hungatei JF-1] gi|88189583|gb|ABD42580.1| isopentenyl-diphosphate delta-isomerase [Methanospirillum hungatei JF-1] Length = 363 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 125/336 (37%), Positives = 183/336 (54%), Gaps = 15/336 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DH+ I D I+ FDD L+H ALP+ D + FLG L PL I Sbjct: 7 TSSRKLDHLRICL-DEHIESGSTGFDDIRLVHEALPDCDMDRLSLETRFLGHNLGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 S+MTGG+ + + +N L A + + + VGSQR + +F +R+ AP T ++ Sbjct: 66 SAMTGGHPE-TKDVNAVLGEIAGEFDLGIGVGSQRAAIENPELADTFSIVREKAPDTFIV 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQL D G++ A +AV ++ AD L +HLN LQE IQP G+ + + + L Sbjct: 125 GNLGIVQLR-DHGIEWAERAVEMIDADALAIHLNFLQEAIQPEGDHDAGGCYAALRELCR 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---------E 231 + VP+++KE G G+S +G DI G GG+SW+ IESHR Sbjct: 184 DLKVPVIVKETGSGISYETGIRCFGAGAACVDIGGYGGSSWALIESHRSGSVAGKEDLHL 243 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G F +WG+PT +SL IASGG+R+G+DI K++++GA L G+A P L Sbjct: 244 KGLGERFGEWGLPTVVSLYE--TTRCGGPVIASGGIRSGIDITKALVMGAHLAGMALPLL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 KPA + D + I ++ +E +SMFL G R+ EL Sbjct: 302 KPACEGPDVLRETIRTIHQELRISMFLTGKTRISEL 337 >gi|30019647|ref|NP_831278.1| isopentenyl pyrophosphate isomerase [Bacillus cereus ATCC 14579] gi|228957874|ref|ZP_04119614.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229043343|ref|ZP_04191061.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH676] gi|229109054|ref|ZP_04238654.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-15] gi|229126912|ref|ZP_04255923.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-Cer4] gi|229144197|ref|ZP_04272611.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST24] gi|229149796|ref|ZP_04278025.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1550] gi|229189680|ref|ZP_04316694.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10876] gi|81435335|sp|Q81FS0|IDI2_BACCR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|29895191|gb|AAP08479.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 14579] gi|228593729|gb|EEK51534.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10876] gi|228633660|gb|EEK90260.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1550] gi|228639205|gb|EEK95621.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST24] gi|228656512|gb|EEL12339.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-Cer4] gi|228674332|gb|EEL29576.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-15] gi|228725991|gb|EEL77230.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH676] gi|228801790|gb|EEM48667.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 349 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|28900133|ref|NP_799788.1| isopentenyl pyrophosphate isomerase [Vibrio parahaemolyticus RIMD 2210633] gi|260365783|ref|ZP_05778279.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus K5030] gi|260880705|ref|ZP_05893060.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AN-5034] gi|260897689|ref|ZP_05906185.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus Peru-466] gi|32129618|sp|Q87JH5|IDI2_VIBPA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|28808416|dbj|BAC61621.1| putative isopentenyl-diphosphate delta-isomerase [Vibrio parahaemolyticus RIMD 2210633] gi|308086205|gb|EFO35900.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus Peru-466] gi|308092710|gb|EFO42405.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AN-5034] gi|308114969|gb|EFO52509.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus K5030] Length = 339 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 180/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-RDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKP 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGDVAQRLVDAGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + VV E + E ++ F G+ +V L L Sbjct: 304 TQLVVDHFEQMALELRLACFGTGSAKVNALTKARRL 339 >gi|227510338|ref|ZP_03940387.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189990|gb|EEI70057.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 343 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 189/339 (55%), Gaps = 16/339 (4%) Query: 1 MVND---RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M++ RK +HI++ K ++ F +H++LP+ + E+D S + L Sbjct: 1 MISKHSHRKDEHISLAEKFY---QDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPLNLQI 57 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPH 116 P I +++GG+ IN+ LA A+KT +AMAVGSQ V SD + +++F + R+ P Sbjct: 58 PFYIEAISGGSPH-TRDINQKLATIAKKTGLAMAVGSQSVALSDTSLVETFTVAREVNPD 116 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +L +N+GA + V A AV ++ AD L LH+NP QE+I P G+ F + + I Sbjct: 117 GLLFANIGA-----NKTVNDARHAVAMIDADALELHVNPAQELIMPEGDRQF-NFLTNIK 170 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + VP+++KEVG G+S I+ + G+ Y +++G+GGT+++ IE+ R + ++ Sbjct: 171 QIVEGLSVPVIVKEVGFGMSRETIQQLIDLGVGYVNVSGQGGTNFAEIENFRRRDKEMA- 229 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM- 295 +DWG+ TP SL +RP+ + +ASGG+++ +DI K + LG+ G+A FL + Sbjct: 230 YLKDWGLTTPESLMESRPFQDRLTVLASGGVKSPLDIAKCLALGSHAVGVAGTFLHLVIH 289 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ D V+ IE + M L +K + EL ++ Sbjct: 290 ENIDEVIRVIEQWQYGLKTIMMLTNSKNITELQKKKLIL 328 >gi|323701117|ref|ZP_08112792.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfotomaculum nigrificans DSM 574] gi|323533719|gb|EGB23583.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfotomaculum nigrificans DSM 574] Length = 352 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 188/336 (55%), Gaps = 13/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK++HI + + FDD L+H +LP+++ +VD S FLGK L PLL Sbjct: 1 MRLNRKLEHIELSLRQK-ESAVSTGFDDITLVHNSLPQLNLADVDTSCTFLGKVLQGPLL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ ++ E IN +LA AA VAMAVGSQR DH SF + R P V+ Sbjct: 60 INAMTGGHPEL-ESINFSLAKAAYTVGVAMAVGSQRAALEDHAVRSSFSVVRDANPDGVI 118 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA D + +A +A+ ++ ADGL LHLN QE+ G+ +F + I LL+ Sbjct: 119 LANLGA-----DCTLNEAREAIKMIKADGLQLHLNVPQELAMAEGDRDFRGILQNIELLT 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + P+++KEVG G+S I +G Y D+ G GGT + IE++R Sbjct: 174 KQLTTPVVVKEVGFGMSRETISRLRAAGAAYIDVGGAGGTDFIAIENNRSGRQTR----W 229 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WGIPT +SL + IASGG+ + +D +K++ LG S+ G+A P LK +D S Sbjct: 230 AWGIPTAISLLEGLAVESPGHLIASGGIVHALDCVKALCLGCSMVGMARPLLKILIDGST 289 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + A +++L + M +LG +R+ +L A+I Sbjct: 290 EELTAYLQNLIADIRRIMLMLGARRIADLTSVPAVI 325 >gi|228920309|ref|ZP_04083656.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839332|gb|EEM84626.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 349 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEVASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPIIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|206974902|ref|ZP_03235817.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus H3081.97] gi|217959076|ref|YP_002337624.1| isopentenyl pyrophosphate isomerase [Bacillus cereus AH187] gi|222095229|ref|YP_002529289.1| isopentenyl pyrophosphate isomerase [Bacillus cereus Q1] gi|229138292|ref|ZP_04266887.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST26] gi|226707315|sp|B7HL09|IDI2_BACC7 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803424|sp|B9IVM2|IDI2_BACCQ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|206746921|gb|EDZ58313.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus H3081.97] gi|217065248|gb|ACJ79498.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH187] gi|221239287|gb|ACM11997.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus Q1] gi|228645184|gb|EEL01421.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST26] Length = 349 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHADLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|229195799|ref|ZP_04322559.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1293] gi|228587696|gb|EEK45754.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus m1293] Length = 349 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKRHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHADLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|302383385|ref|YP_003819208.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas subvibrioides ATCC 15264] gi|302194013|gb|ADL01585.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas subvibrioides ATCC 15264] Length = 342 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 186/336 (55%), Gaps = 5/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + DRK H+++V G FD +H ALP++ ++D ++FLG++L PLLI Sbjct: 6 ITDRKDQHLDVVLAGGGRHARDAGFDAVRFVHEALPDLDHGKIDLGIDFLGRRLQAPLLI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN +LA AA+ +A+AVGSQR + LR AP T ++ Sbjct: 66 SSMTGGPARA-EAINAHLAEAAQALGIALAVGSQRAALEGGGGGGLNQSLRDRAPDTPIL 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA QL FGV +A + + ++GAD L +HLNPLQE QP G+ ++ + + + L Sbjct: 125 ANIGAAQLTRGFGVDEARRIIDMIGADALIVHLNPLQEACQPEGDRDWWGVGAALEALIR 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP+++KE G G+S+ G+ D+AG GG +W IE R + + Sbjct: 185 KLGVPVIVKETGAGISAATARRLFAMGVAGVDVAGAGGANWGLIEGERATDQADKAHALA 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGI T ++E R C ++ I SGG+R+GVD K+I LGA L G A+ L A S Sbjct: 245 FADWGISTARAIETVREACPDSLIIGSGGVRDGVDAAKAIRLGADLVGQAAGVLVAATQS 304 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++AVV + + ++ S F G+ + EL L Sbjct: 305 TEAVVEHFQIVIRQLRTSCFCTGSSNLVELKRAALL 340 >gi|196033589|ref|ZP_03101001.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus W] gi|218902710|ref|YP_002450544.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH820] gi|228926629|ref|ZP_04089698.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121141|ref|ZP_04250378.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 95/8201] gi|226707312|sp|B7JGY4|IDI2_BACC0 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|195994023|gb|EDX57979.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus W] gi|218535057|gb|ACK87455.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH820] gi|228662260|gb|EEL17863.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus 95/8201] gi|228833005|gb|EEM78573.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 349 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIEFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|153837093|ref|ZP_01989760.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ3810] gi|149749681|gb|EDM60426.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ3810] Length = 339 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 179/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-RDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKP 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGDVAQRLVDVGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + VV E + E ++ F G+ +V L L Sbjct: 304 TQLVVDHFEQMALELRLACFGTGSAKVNALTKARRL 339 >gi|311068804|ref|YP_003973727.1| isopentenyl pyrophosphate isomerase [Bacillus atrophaeus 1942] gi|310869321|gb|ADP32796.1| isopentenyl pyrophosphate isomerase [Bacillus atrophaeus 1942] Length = 349 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 180/336 (53%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HI+ + + DD +H +LP+++ ++VD + + S P+ I+ Sbjct: 4 AERKRQHIDHALSTG--QKRETGLDDITFVHVSLPDLALEQVDITTKIGELTSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + IN++LA AA + +AVGSQ D + S+E +R+ P ++ + Sbjct: 62 AMTGGGGQHTYEINKSLARAARAADIPLAVGSQMSALKDPSERFSYEIVRKENPDGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A +AV +L AD L +HLN +QEI+ P G+ +F+ +I + Sbjct: 122 NLGS-----EATTEQAKRAVSMLEADALQIHLNVIQEIVMPEGDRSFSGALGRIEQMCKE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S +SG DI G GGT++S+IE+ R + F W Sbjct: 177 LEVPVIVKEVGFGMSKESAARLYESGAAAVDIGGYGGTNFSKIENLRRDKQ--LNFFNSW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T SL ++ IASGGL++ +D+ K+I LGAS G+A FLK D Sbjct: 235 GISTAASLAEITSQFHDKAVIASGGLQHALDVAKAIALGASFAGMAGYFLKALTAKGEDG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ I L +E V M +LG K + EL +I+ Sbjct: 295 LIDEIRELLQELKVIMTVLGVKTIPELQQAPLVIQG 330 >gi|297242908|ref|ZP_06926846.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis AMD] gi|296889119|gb|EFH27853.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis AMD] Length = 787 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 183/348 (52%), Gaps = 21/348 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK------K 54 ++ +RK HI + K R FD + ALP+++ +E+D SV LG Sbjct: 442 IIQNRKDAHIALADKQYK-TRADSDFDKVRFVPNALPQVALEEIDASVSVLGSEVCDSVH 500 Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQY 113 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F + R Sbjct: 501 WCSPIYINAMTGGSD-AAKKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSE 559 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 PH +++N+ A A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 560 NPHGFVMANVSA-----GTSASDALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLR 614 Query: 174 KIALL---SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I + A+ VP+++KE GCG+S+ D++ G+R D++GRGGT++ IE+ R Sbjct: 615 NIESIVSACEALKVPVIVKETGCGISAKDVQCLKDVGVRTVDVSGRGGTNFVTIENARRN 674 Query: 231 ESDIGIVFQDWGIPTPLSLEMAR--PYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D DWG+ T SL R + ASGG+R +D+++++ LGAS G+A Sbjct: 675 LGDCD-YLADWGLTTVESLVDIRKCDSLKNMEVFASGGVRTPLDVVRALALGASAVGVAG 733 Query: 289 PFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 734 EFLHTLMHEGEDALSLQIDNWKKQIRVIMALLGCKTVKDLQEKTEFVR 781 >gi|228945198|ref|ZP_04107554.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814433|gb|EEM60698.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 349 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIEFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I L + M LG K ++EL +I+ + Sbjct: 295 LVDEINLLHADLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|56292023|emb|CAI29177.1| isopentenyl-pyrophosphate isomerase [Trypanosoma cruzi] Length = 356 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 129/337 (38%), Positives = 196/337 (58%), Gaps = 9/337 (2%) Query: 1 MVNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 +V RK DHI+I ++ + + + ALPEIS ++D EF+G LSFP Sbjct: 12 IVRRRKKDHIDICLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 L+ISSMTGG + IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 72 LIISSMTGG-EEHGRIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSVP 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TNF L K+ L Sbjct: 131 MFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTNFESLLHKLEEL 190 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 + VP+++K VG G+ + + G++Y D++G GGTSW+ IE R + ++ Sbjct: 191 LPHIKVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIEGWRHPDLPDDQNL 250 Query: 235 GIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G +F+D GI T SL+ P ++ + IA GG+R G+DI KS+++GA A PFLK Sbjct: 251 GYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDIAKSLMMGAECATAALPFLK 310 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 A++S + V I+ +KE IV+MF G ++EL Sbjct: 311 AALESPERVRGVIQRFKKELIVAMFACGASTIEELRK 347 >gi|269960127|ref|ZP_06174503.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835098|gb|EEZ89181.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 339 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 130/336 (38%), Positives = 183/336 (54%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ +D S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAIDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQRV D ++ +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGKTIRDLAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 124 SNLGAAQLRDKQRLDNAQRAVDFIRADALFVHLNPMQEAFQQNGDHDWIGVLKSIEWLKQ 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 +DVP+++KEVG G+S + +++G+ D+AG GGTSWS +E + ++ + + Sbjct: 184 RVDVPMIIKEVGFGISGAVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT LE IASGG+ +G++ K+I LGASL G A LK A S Sbjct: 244 FRDWGIPTAKCLEQIHAQYPNLPIIASGGVHDGLEAAKAIHLGASLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +VV E + E ++ F G+ +Q L L Sbjct: 304 TQSVVDHFEQMALELRLACFGTGSANLQALTQARRL 339 >gi|227513346|ref|ZP_03943395.1| isopentenyl pyrophosphate isomerase [Lactobacillus buchneri ATCC 11577] gi|227083219|gb|EEI18531.1| isopentenyl pyrophosphate isomerase [Lactobacillus buchneri ATCC 11577] Length = 343 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 108/339 (31%), Positives = 186/339 (54%), Gaps = 16/339 (4%) Query: 1 MVND---RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M++ RK +HI++ K ++ F +H++LP+ + E+D S + L Sbjct: 1 MISKHSHRKDEHISLAEKFY---QDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPINLQI 57 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPH 116 P I +++GG+ + IN+ LA A+KT +AMAVGSQ V D + +++F + R+ P Sbjct: 58 PFYIEAISGGSPH-TKDINQKLATIAKKTGLAMAVGSQSVALGDASLVETFTVAREVNPD 116 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +L +N+GA D V A AV ++ AD L LH+NP QE+I P G+ F + + I Sbjct: 117 GLLFANIGA-----DKTVDDARHAVAMIDADALELHVNPAQELIMPEGDRQF-NFLTNIK 170 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + VP+++KEVG G+S I+ G+ Y +++G GGT+++ IE+ R + ++ Sbjct: 171 QIVEGLSVPVIVKEVGFGMSRETIQQLADLGVGYVNVSGHGGTNFAEIENFRRRDKEMA- 229 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM- 295 ++WG+ TP SL +RP+ + +ASGG+++ DI K + LG+ G+A FL + Sbjct: 230 YLKNWGLTTPESLMESRPFQDRLTVLASGGIKSPSDIAKCLALGSHAVGVAGTFLHLVIH 289 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ D V+ IE + M L +K + EL ++ Sbjct: 290 ENIDEVIRVIEQWQYGLKTIMMLTNSKNITELQKKKLIL 328 >gi|40882374|dbj|BAD07378.1| IPP isomerase [Actinoplanes sp. A40644] Length = 363 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK DH+ + FDD +H AL I +V + F G + PL Sbjct: 1 MIANRKDDHVRFAAEQQRRPDGYNQFDDVSFVHHALAGIDRTDVSLTTRFGGIEWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K INR+LAIAA++T V +A GS F+D +F + R+ P + Sbjct: 61 INAMTGGSAK-TGLINRDLAIAAQETGVPIATGSMSAYFADDAVADTFSVMRRENPKGFI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+N+ A + V KA +A+ ++ AD L +HLN +QE + P G+ F+ +I + Sbjct: 120 IANVNA-----NATVDKARRAIDLMEADALQIHLNSIQETVMPEGDRAFSSWGPQIGRIV 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VP+++KEVG GLS ++ G+ D+AG GGT+++RIE+ R +D Sbjct: 175 AGAGVPVIVKEVGFGLSRETLDRLRDLGVTVADVAGSGGTNFARIENDRRDRADYSF-LN 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG TP L A+ + SGG+R+ +D+++++ LGAS G + FL +D Sbjct: 234 GWGQSTPACLLDAQGV--GIPVLGSGGVRHPLDVVRALALGASAVGASGLFLTTVLDGGP 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++A I + M LG + EL LI Sbjct: 292 PALIALISGWLDQLKALMTALGARNPAELTRCDVLI 327 >gi|330962413|gb|EGH62673.1| isopentenyl pyrophosphate isomerase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 351 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 136/336 (40%), Positives = 188/336 (55%), Gaps = 6/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+NIV + G D H ALPE++ D++D L L PLL Sbjct: 6 LGRRKDDHLNIVLEQRGAGSGAVTGLDAVQFEHCALPELNLDDIDLRSALLHMPLRAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVL 119 ISSMTGG + INRNLAIAA++ +AM VGSQRV + + ELR+ AP L Sbjct: 66 ISSMTGGAERST-VINRNLAIAAQELGMAMGVGSQRVGLRSPNDQGLTRELRRLAPGVPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +SN+GA QL G+ A +AV L AD L +HLNPLQE +Q G+ + + + IA Sbjct: 125 LSNIGAAQLLEADGLDLARRAVDALQADALIIHLNPLQEAVQAEGDRQWQGVLNTIARTV 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGI 236 ++ VP+++KEVG GLS+ L G+R D+AG+GGTSW+ +E+ R + ++ + Sbjct: 185 ESVGVPVIVKEVGAGLSAEVASLLAGVGVRVIDVAGKGGTSWAAVEAGRATSAADREVAM 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT SL R + IASGG+RNGVD K+I LGA L G A+ L AM Sbjct: 245 AFADWGIPTATSLINVRKALPDITLIASGGIRNGVDAAKAIRLGADLVGQAAGVLNEAML 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 SS AV+ E + ++ ++ F + + L Sbjct: 305 SSSAVIEHFEIIIRQLRIACFCTASADLAALRKARL 340 >gi|116753787|ref|YP_842905.1| isopentenyl pyrophosphate isomerase [Methanosaeta thermophila PT] gi|121693256|sp|A0B6E1|IDI2_METTP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116665238|gb|ABK14265.1| isopentenyl-diphosphate delta-isomerase [Methanosaeta thermophila PT] Length = 357 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 134/343 (39%), Positives = 202/343 (58%), Gaps = 14/343 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK++HI I K + + + FDD L+HRALPEI +V FL ++LS PL+I Sbjct: 3 TVRRKLEHIEICLKKEVVSK-YRPFDDLILLHRALPEIDESDVCTECTFLNRRLSAPLII 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 S+MTGG+ E IN NLA AA++T +A+ VGSQR + +F + R+ AP +I Sbjct: 62 SAMTGGHPDARE-INANLATAAQETGIAIGVGSQRAALEHPDLEDTFSVVRELAPDVPVI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQL+ +G + + ++ AD + +HLN LQE +QP G + A + + + Sbjct: 121 GNIGAVQLHR-YGPEVLDRVAEMVDADAVAVHLNFLQESVQPEGERHAAGVLGSLRE--A 177 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------DI 234 +P+++KE GCG+ D + + SGI+ D+AG GGTSWS +ES+R +I Sbjct: 178 RFRLPIIIKETGCGIPFEDARMLVDSGIQLIDVAGTGGTSWSMVESYRAELRGDPESKEI 237 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G++F +WGIPTP+S+ AQ I+SGG+R+G+D+ +SI LGA + G A P L PA Sbjct: 238 GMLFAEWGIPTPVSVIECSRA--GAQVISSGGVRSGIDVARSIALGAFMAGAALPLLAPA 295 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S VV ++ +E +SMFL G++ +QEL +I + Sbjct: 296 TRGSVDVVRVLQRFVRELRISMFLTGSRSLQELSRAPVIITGR 338 >gi|328470114|gb|EGF41025.1| isopentenyl pyrophosphate isomerase [Vibrio parahaemolyticus 10329] Length = 339 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 179/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-RDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKP 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGDVAQRLVDVGVDAIDVAGAGGTSWSAVEGYCQDNPHMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + VV E + E ++ F G+ +V L L Sbjct: 304 TQLVVDHFEQIALELRLACFGTGSAKVNALTKARRL 339 >gi|185535155|gb|ACC77853.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus xylosus] Length = 347 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 107/333 (32%), Positives = 171/333 (51%), Gaps = 11/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD+ +H ++P I D+VD + L+ PL I+ Sbjct: 7 EQRKNEHVEIAMAQK--DATISDFDEIRFVHHSIPNIDVDDVDLTSNLTDFTLNQPLYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++IN LA+ A +T +AMAVGS + SF + R+ P + S Sbjct: 65 AMTGGSE-WTKQINEKLAVIARETGIAMAVGSTHAALRNSKMASSFSVVRETNPEGIFFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA ++V +L A L +H+N QE++ P GN F+ +A + + Sbjct: 124 NVGA-----DVPVDKAVESVKLLDAQALQVHVNAPQELVMPEGNRTFSTWMENLAQIVAR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S I+ + GI+Y D++GRGGT++ IE+ R D+ W Sbjct: 179 VDVPVIVKEVGFGMSKETIKSLNEIGIKYVDVSGRGGTNFVDIENERRTYKDMD-YLGLW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL + Y + +ASGG+R +D +K + LGAS G++ PFL + Sbjct: 238 GQTTVESLLESTAYQQDMDILASGGVRTPLDAVKCLALGASAVGMSRPFLNHVENYGITE 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + E + M +L K +++L + Sbjct: 298 TLNYTEQFTEHMKKIMTMLDAKSIKDLQHAQMV 330 >gi|330508371|ref|YP_004384799.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosaeta concilii GP-6] gi|328929179|gb|AEB68981.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosaeta concilii GP-6] Length = 365 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 131/345 (37%), Positives = 197/345 (57%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK+DHI I +P + FDD L+H+ALPEI ++D S FLG+KLS PL Sbjct: 3 TSSRKLDHIRICLDNPVESEGVVARSFDDLVLVHKALPEIDEADIDTSCRFLGRKLSAPL 62 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +IS+MTGG+ ++ IN NLA+AA + +AM VGSQR + + +F +R AP Sbjct: 63 MISAMTGGHP-SVKEINVNLALAASELGIAMGVGSQRAALEEESLKDTFSAVRDAAPDIP 121 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I N+GAVQL G Q ++ AD + +HLN LQE IQP G+ + + + + Sbjct: 122 IIGNIGAVQLKRS-GPGILDQLAEMIDADAIAVHLNFLQESIQPEGDRDASGVVKVLGEA 180 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------S 232 ++ VP+++KE G G+S G++ D++G+GG SW+ +E++R E Sbjct: 181 ANG-SVPIIVKETGAGISRETAASLADVGVKMIDVSGQGGLSWAGVETYRAAEIGDCDLE 239 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++G +F WGIPTP+S+ R I+SGG+R+G+D+ KS+ LGASL G A P LK Sbjct: 240 EMGRLFWSWGIPTPVSIVECRSI--GLDVISSGGIRSGLDVAKSLSLGASLAGTALPMLK 297 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 PA + AVV A+ + + MFL G +R EL ++ + Sbjct: 298 PATKDAKAVVRAMSPYLRALRICMFLTGCRRAGELKGVPLVVLGR 342 >gi|269839078|ref|YP_003323770.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermobaculum terrenum ATCC BAA-798] gi|269790808|gb|ACZ42948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermobaculum terrenum ATCC BAA-798] Length = 349 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 140/340 (41%), Positives = 189/340 (55%), Gaps = 5/340 (1%) Query: 2 VNDRKIDHINIVCKDPGID-RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK + V G D R + FD L HRALPEIS EV FLG++L PLL Sbjct: 7 TAARKDRQLQAVLDSAGDDGRLEGGFDALRLPHRALPEISLSEVSTRTVFLGRELGAPLL 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS TGG + E I R LA AA+ ++A +GSQRVM A + F++R AP ++ Sbjct: 67 ISCTTGGTPRTYEIIAR-LARAAQVRRLAFGLGSQRVMLEFPEAARFFQVRALAPDVPIL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGAVQLNY V + V + +D L LHLNPLQE +Q GNTNF+ L KI L Sbjct: 126 SNLGAVQLNYGVTVDDCRRLVELSESDALVLHLNPLQEALQEGGNTNFSGLLGKIEALCR 185 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIV 237 + VP++ KE+G G+S + +G+ D+AG GGTSWS+IES +G Sbjct: 186 QLPVPVIAKEIGYGISGEVARQLVDAGVWGIDVAGAGGTSWSQIESKLASSPRGRMVGRA 245 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F WGIPT ++ R + IASGGLR+GVD+ K+I LGA + G+A P +K A S Sbjct: 246 FAAWGIPTSRAVVSVRRALPQVPLIASGGLRDGVDVAKAIALGADMAGIAGPLVKAAAAS 305 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A++ +++L ++ V+MF G V L + Q Sbjct: 306 EEALMEYVDALVQQLRVAMFCTGAADVSSLRQVEVIWEGQ 345 >gi|42780700|ref|NP_977947.1| isopentenyl pyrophosphate isomerase [Bacillus cereus ATCC 10987] gi|81569704|sp|Q73AZ6|IDI2_BACC1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|42736620|gb|AAS40555.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 10987] Length = 349 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLRRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIVEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|90415698|ref|ZP_01223632.1| isopentenyl pyrophosphate isomerase [marine gamma proteobacterium HTCC2207] gi|90333021|gb|EAS48191.1| isopentenyl pyrophosphate isomerase [marine gamma proteobacterium HTCC2207] Length = 335 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 133/335 (39%), Positives = 198/335 (59%), Gaps = 8/335 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHIN+ + FD H ALPE+ EVD S FL + S PL+I Sbjct: 4 ISQRKADHINLALQAEHQGALSAGFDRIQFEHNALPELLVSEVDCSAIFLNQYCSAPLII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG E INR+LA AAE+ ++ MAVGSQR D A +R++AP +L+ Sbjct: 64 GAMTGGCEH-GESINRHLAEAAEQAQIPMAVGSQRAALQDGLAQD---VRRWAPKAILLG 119 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL GV+ A +AV + A+ + +HLNPLQE++QP+G+ ++ + + I + Sbjct: 120 NLGGTQLQ-QHGVELAQRAVDSIEANAMIIHLNPLQELVQPDGDRDWRGVLAAIEECCAT 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP+++KEVG G+ + + G+ + +IAGRGGTSW+ IES R E I F Sbjct: 179 LSVPVIIKEVGSGIGPSSAQRLIDVGVSWIEIAGRGGTSWASIESARIQQTREQQIAAPF 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+ T + R ++ IASGGLR+G+DI +S+ LGA++ +A PFL+PA++S+ Sbjct: 239 IDWGMDTAQLIPQVRSQSSQLGLIASGGLRDGLDIARSLRLGANMSAMAQPFLQPALEST 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DAV+ IE R++ +MFL G+ ++ L L Sbjct: 299 DAVIEKIEIFREQLRWAMFLTGSANLKRLQSAPLL 333 >gi|319745285|gb|EFV97603.1| isopentenyl-diphosphate delta-isomerase [Streptococcus agalactiae ATCC 13813] Length = 331 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI K FDD LIH +LP+ + +++D S F G+ FP I Sbjct: 1 MTNRKDDHIKYALKY---QSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ + M GS + S+ P L + Sbjct: 58 NAMTGGSEK-GKAVNHKLAQVAQAIGIVMVTGSYSAALKNDE-DDSYPTTDLYPDLKLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D + A V + L +H+N +QE++ P G F S + Sbjct: 116 NIG-----LDKPIPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDN 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + PL+LKEVG G+ I+ GI DI+GRGGTS++ IE+ R + W Sbjct: 171 IQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDR---SYLNTW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL A+ ++ +ASGG+R+ +D++K ++LGA GL+ L+ D Sbjct: 228 GQTTAQSLINAQSMIDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDD 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A + S +++ + M L K++ +L ++ Q Sbjct: 288 VIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQ 324 >gi|218235127|ref|YP_002366279.1| isopentenyl pyrophosphate isomerase [Bacillus cereus B4264] gi|226707314|sp|B7HHQ2|IDI2_BACC4 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|218163084|gb|ACK63076.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus B4264] Length = 349 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ IE L + M LG K ++EL +++ + Sbjct: 295 LLDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|260899401|ref|ZP_05907796.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ4037] gi|308109287|gb|EFO46827.1| isopentenyl-diphosphate delta-isomerase, type 2 [Vibrio parahaemolyticus AQ4037] Length = 339 Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 180/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + + F+ H ALPE F+ +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKKKTAGFESVEFEHCALPECDFNTIDLSTEFLGHRLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-RDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I L Sbjct: 124 SNLGAAQLRDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWIGVLHAIEQLKP 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 ++VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVNVPIIIKEVGFGISGDVAQRLVDAGVGAIDVAGAGGTSWSAVEGYCQDNPHMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT L R + IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGIPTATCLAQIRAQHPKLPLIASGGIHNGLEAAKAIHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + VV E + E ++ F G+ +V L L Sbjct: 304 TQLVVDHFEQMALELRLACFGTGSAKVNALTKARRL 339 >gi|166709967|ref|ZP_02241174.1| isopentenyl pyrophosphate isomerase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 366 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 130/337 (38%), Positives = 198/337 (58%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV ++ H ALPE+ ++D LGK L PLL Sbjct: 28 LSRRKDDHLDIVLARQAATAAAMPGWERIRFEHCALPELDLAQIDLRASLLGKTLRAPLL 87 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+L+ AA+ +AM VGSQRV ++ + LR+ AP L Sbjct: 88 ISSMTGGMPRA-DAINRHLSEAAQTLGIAMGVGSQRVSLQSRSSQGLTRALRRNAPDIPL 146 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL G+ A +AV VL ADGL +HLNPLQE +QP G+ ++ + ++IA + Sbjct: 147 LANIGAAQLCEADGLDLARRAVDVLEADGLIIHLNPLQEAVQPEGDRDWRGVLAQIARTA 206 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGI 236 ++ VP+++KEVG GLS+ +++G+ D+AG GGTSW+ +E R L + + + Sbjct: 207 RSIGVPIVVKEVGSGLSATVACALVEAGVAVIDVAGAGGTSWAAVEGERALDPADRAVAM 266 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F +WGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A Sbjct: 267 AFAEWGIPTPTSVQAIRRTLPAVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAATV 326 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S++AVV E + ++ V+ F G+ + L L Sbjct: 327 STEAVVTHFEIVIRQLAVACFCTGSADLAALRQARLL 363 >gi|228990610|ref|ZP_04150575.1| Isopentenyl-diphosphate delta-isomerase [Bacillus pseudomycoides DSM 12442] gi|228769136|gb|EEM17734.1| Isopentenyl-diphosphate delta-isomerase [Bacillus pseudomycoides DSM 12442] Length = 349 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 170/336 (50%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++HI F D +H++LP S++ + E LS P+ I+ Sbjct: 4 AKRKLEHIEYALSTG--QSRIHGFHDIAFVHQSLPNSSYESITFETEIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG IN LA A++ +AMAVGSQ D S+ +R+ P+ ++ + Sbjct: 62 AMTGGGGDHTLHINEQLAHVAKQHNLAMAVGSQMAALKDEKEASSYRIVRKVNPNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + ++ Sbjct: 122 NLGS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEQIVTS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ D+ G GGT+++ +E+ R + F DW Sbjct: 177 SPVPVIVKEVGFGMSKETVQQLTNVGVTAVDVGGYGGTNFAAVENERR--KRMLSYFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A IASGG++ +D+ K+I LGA A FL+ M D + Sbjct: 235 GIQTVASIIEASSTNKNLSLIASGGIQTALDVAKAIALGARATAFAGYFLRILMNDGTQK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ IE L + M LG + + EL +++ Sbjct: 295 LMDEIELLHTDLQFIMTALGARTLSELQRVPLIVKG 330 >gi|229078781|ref|ZP_04211334.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock4-2] gi|228704463|gb|EEL56896.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock4-2] Length = 349 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPIIVKEVGFGMSKETVQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKVIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V IE L + M LG K ++EL +++ + Sbjct: 295 LVDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|320546916|ref|ZP_08041218.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equinus ATCC 9812] gi|320448434|gb|EFW89175.1| isopentenyl-diphosphate delta-isomerase [Streptococcus equinus ATCC 9812] Length = 332 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 97/337 (28%), Positives = 163/337 (48%), Gaps = 14/337 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +HI K FD+ LIH +LP+ E+D F G+ +P I Sbjct: 1 MMNRKDEHIKYALKY---QSPYNSFDEMELIHHSLPDYDLSEIDLHTHFTGRDFDYPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N LA A+ T + M GS + S+ ++ P +L + Sbjct: 58 NAMTGGSEKA-KAVNCKLAQVAQATGLVMVTGSYSAALKNP-QDDSYPSKKDYPDLLLAT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG D + Q V + L +H+N +QE++ P G F + ++ Sbjct: 116 NLG-----IDKPYELGLQTVDEMQPIFLQVHVNLMQELLMPEGEREFRSWKKNLENYATK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M VP++LKEVG G+ I++ GI+ FDI+GRGGTS++ IE+ R + +W Sbjct: 171 MPVPIVLKEVGFGMDLKTIQMAHAFGIKTFDISGRGGTSFAFIENQRGGDR---SYLNEW 227 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T SL + + + + +ASGG+R+ +D++K +LGA GL+ L+ + Sbjct: 228 GQTTVQSLLNLQDFVDTVEILASGGVRHPLDMVKCFVLGAKGVGLSRTVLELVEKYPVEK 287 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VV + + + + M L K + +L L+ + Sbjct: 288 VVDIVNGWKDDLRLIMCALNCKTITDLRNVDYLLYGK 324 >gi|257899512|ref|ZP_05679165.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com15] gi|257837424|gb|EEV62498.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com15] Length = 351 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIVRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I+ G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETIKDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G + L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMIGATNIATLHQQSLIFSG 327 >gi|229016855|ref|ZP_04173783.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1273] gi|229023061|ref|ZP_04179575.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1272] gi|228738207|gb|EEL88689.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1272] gi|228744416|gb|EEL94490.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1273] Length = 349 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ + + S++ +R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKNESEAASYKIVRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLRRIEQIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETVQQLASIGITAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRVLMQDGVEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I+ L + M LG K ++EL +++ + Sbjct: 295 LMDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|229010904|ref|ZP_04168100.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides DSM 2048] gi|229166442|ref|ZP_04294198.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH621] gi|228617016|gb|EEK74085.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH621] gi|228750304|gb|EEM00134.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides DSM 2048] Length = 349 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVVRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGVEN 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGVKTIEELQSVPLVVKGE 331 >gi|229155164|ref|ZP_04283276.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 4342] gi|228628291|gb|EEK85006.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus ATCC 4342] Length = 349 Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRVLMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|289192772|ref|YP_003458713.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus sp. FS406-22] gi|288939222|gb|ADC69977.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus sp. FS406-22] Length = 358 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 193/350 (55%), Gaps = 16/350 (4%) Query: 1 MVNDR------KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK 54 M+N+R K++HI + +D LIH+ I+F++++ ++ GKK Sbjct: 1 MINNRNEIEVRKLEHIFLCSYCDVEYEKTTLLEDIELIHKGTCGINFNDIETEIKLFGKK 60 Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L+ P+++S MTGG++K E IN+N+A A E+ + M VGSQR + N + ++ + + Sbjct: 61 LAAPIIVSGMTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNDNLVDTYSIVRDY 119 Query: 115 PHTVLISNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + ++I NLGAV D + + +AV ++ AD + +H NPLQEIIQP G+ NF ++ Sbjct: 120 TNNLVIGNLGAVNFIVDNWDEEVIDKAVEMIDADAMAIHFNPLQEIIQPEGDLNFKNIYK 179 Query: 174 KIALLSSAM----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR- 228 L+S+ ++P + K+VG G S D + G D+ G GGTSW+++E +R Sbjct: 180 LKELISNYKKNYKNIPFIAKQVGEGFSKEDAVILKDIGFDAIDVQGSGGTSWAKVEIYRV 239 Query: 229 --DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + ++ F +WGIPT S+ + N I SGG+R+G+DI K I +G + Sbjct: 240 KDEELKNLAEKFANWGIPTAASIFEVKSIYNGI-VIGSGGIRSGLDIAKCIAIGCDCCSI 298 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + P LK A+ + VV +ES KE ++MFL+G + + EL +++ Sbjct: 299 SLPILKAALKGWEEVVKVLESYIKELKIAMFLVGVENIDELKKTPYIVKG 348 >gi|196038958|ref|ZP_03106265.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus NVH0597-99] gi|196030103|gb|EDX68703.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus NVH0597-99] Length = 349 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|156976153|ref|YP_001447059.1| isopentenyl pyrophosphate isomerase [Vibrio harveyi ATCC BAA-1116] gi|166226210|sp|A7N787|IDI2_VIBHB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156527747|gb|ABU72832.1| hypothetical protein VIBHAR_04924 [Vibrio harveyi ATCC BAA-1116] Length = 339 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 186/336 (55%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK H++ V D + F+ H ALPE F+ VD S EFLG L+ P LI Sbjct: 5 SNRKDLHLDAVLHHDMNMKSKTAGFESVEFEHCALPECDFNAVDLSSEFLGHSLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQRV D ++ +R A L Sbjct: 65 SSMTGGA-KDAEIINCRLAEAASEMGIAMGVGSQRVSLEDSLHSGLGKTIRDLAKGVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL A +AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 124 SNLGAAQLMDKQRFDNAQRAVDFIQADALFVHLNPMQEAFQQNGDHDWIGVLKSIEQLKQ 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 +DVP+++KEVG G+S + + +++G+ D+AG GGTSWS +E + ++ + + Sbjct: 184 RVDVPMIIKEVGFGISGVVAKQLVEAGVDAIDVAGAGGTSWSAVEGYCQTDNKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWGIPT LE R + IASGG+ NG++ K++ LGA+L G A LK A S Sbjct: 244 FRDWGIPTAKCLEQIRGQYPDLPLIASGGVYNGLEAAKAVHLGANLVGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++++V E + E ++ F G+ ++ L L Sbjct: 304 TESIVEHFEQMALELRLACFGTGSANLRALTQARRL 339 >gi|163939413|ref|YP_001644297.1| isopentenyl pyrophosphate isomerase [Bacillus weihenstephanensis KBAB4] gi|229132405|ref|ZP_04261259.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST196] gi|226707316|sp|A9VMA7|IDI2_BACWK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|163861610|gb|ABY42669.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus weihenstephanensis KBAB4] gi|228651111|gb|EEL07092.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BDRD-ST196] Length = 349 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESESASYKVVRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGVEN 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGVKTIEELQSVPLVVKGE 331 >gi|228984677|ref|ZP_04144850.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775071|gb|EEM23464.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 349 Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|21227866|ref|NP_633788.1| isopentenyl pyrophosphate isomerase [Methanosarcina mazei Go1] gi|24211805|sp|Q8PW37|IDI2_METMA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|20906280|gb|AAM31460.1| Isopentenyl-diphosphate delta-isomerase [Methanosarcina mazei Go1] Length = 365 Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 131/343 (38%), Positives = 200/343 (58%), Gaps = 13/343 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+ + + P R F+D LIHRALPE++ DE+D SV+FLGK++ P L Sbjct: 5 TSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIKAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ I +N LA AAE+ V + VGSQR D + SF + R AP + Sbjct: 65 IASITGGHPDTI-PVNAALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPDAFV 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ +GV+ + + ++ AD L +HLN LQE +QP G+ + I + Sbjct: 124 YGNVGAAQIR-QYGVEGVEKLIEMIDADALAIHLNFLQEAVQPEGDRDATGCLDMITEIC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------D 233 S + P+++KE G G+S D L K+G+ D+ G GGTSW+ +E +R ES Sbjct: 183 SQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVSER 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D+GIPT SL +R IA+GG+RNG+DI KSI LGAS A PF+ P Sbjct: 243 LGELFWDFGIPTVASLIESRV---SLPLIATGGIRNGLDIAKSIALGASAASAALPFVGP 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ ++VV + + +EF +MFL G +++L+ + ++ Sbjct: 300 SLEGKESVVRVLSCMLEEFKAAMFLCGCGNIKDLHNSPVVVTG 342 >gi|49481031|ref|YP_035715.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81396667|sp|Q6HL56|IDI2_BACHK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|49332587|gb|AAT63233.1| isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 349 Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|228996710|ref|ZP_04156347.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] gi|228763029|gb|EEM11939.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 168/336 (50%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++HI F D +H++LP S++ + E LS P+ I+ Sbjct: 4 AKRKLEHIEYALSTG--QSRIHGFHDIAFVHQSLPNSSYESITFETEIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG IN LA A+ +AMAVGSQ D S+ +R+ P+ ++ + Sbjct: 62 AMTGGGGDHTLHINEQLAHVAKHHNLAMAVGSQMAALKDEKEASSYRIVRKVNPNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + ++ Sbjct: 122 NLGS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEQIVTS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ D+ G GGT+++ +E+ R + F DW Sbjct: 177 SPVPVIVKEVGFGMSKETVQQLTDVGVTAVDVGGYGGTNFAAVENERR--KRMLSYFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A IASGG++ +D+ K+I LGA A FL+ M D Sbjct: 235 GIQTVASIIEASSTNKNLSLIASGGIQTALDVAKAIALGARATAFAGYFLRILMNDGIQK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ IE L + M LG + + EL +++ Sbjct: 295 LMDEIELLHTDLQFIMTALGARTLSELQRVPLIVKG 330 >gi|228932884|ref|ZP_04095751.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826805|gb|EEM72572.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 177/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++GA+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVGANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|328945442|gb|EGG39594.1| isopentenyl-diphosphate delta-isomerase [Streptococcus sanguinis SK1087] Length = 335 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 14/338 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHI + FD+ L+HR+LP+ E+D S F G+ FP Sbjct: 2 MSQNRKDDHIKYALEQR---PGYNSFDEMELVHRSLPKYDLAEIDLSTHFAGRDWEFPFY 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN LA AE + GS + + S+ + P+ +L Sbjct: 59 INAMTGGSQK-GGQINEKLAQVAESCGLLFVTGSYSAALKNPS-DPSYRVAAGRPNLLLA 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D Q A QAV L L +H+N +QE++ P G F + S Sbjct: 117 TNIG-----LDKHYQAAQQAVADLKPLFLQVHVNLMQELLMPEGEREFRSWLQHLTDYSQ 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D+PL+LKEVG G+ +E GI+ FD++GRGGTS++ IE+ R D D Sbjct: 172 RLDLPLILKEVGFGMDRSTVEEARSLGIQTFDLSGRGGTSFAYIENQRGGNRD---YLND 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 WG T SL + +E + +ASGG+R+ +D++K+++LGA GL+ L S + Sbjct: 229 WGQSTLQSLLALQLLRDEVELLASGGVRHPLDMIKALVLGAKAVGLSRTMLDLVENHSVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + + + M L + +QEL L+ + Sbjct: 289 EVIDIVEGWKSDLRLIMCALSCRNLQELKNVPYLLYGR 326 >gi|72536067|gb|AAZ73134.1| isopentenyl pyrophosphate isomerase [Enterobacteriaceae bacterium DC404] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 130/335 (38%), Positives = 183/335 (54%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV D + + FD W H ALPE+ D +D S + L P+LIS Sbjct: 8 QRKNDHLDIVLHPDRAMSTIRTGFDAWRFEHCALPELDLDGIDLSTTLFSRPLKAPVLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLIS 121 SMTGG + + INR+LA AA+ +AM VGSQRV D +LR AP L++ Sbjct: 68 SMTGGAARARD-INRHLAQAAQTLGLAMGVGSQRVALEDGAQHGLDAQLRHIAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + IA L Sbjct: 127 NLGAAQIRGAQGLDYARRAVDMIDADALIVHLNPLQEALQGGGDRDWRGILNAIAQLVRD 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVF 238 + VP+++KEVG G+S G+ DIAG GGTSW+ +E+ R ++ + F Sbjct: 187 LPVPVVVKEVGAGISPDVACRLADVGVAMIDIAGAGGTSWAAVEAERAPTPEARNVAMAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG+ NG+D K+I LGA L G A+ L A S Sbjct: 247 ADWGIPTADALRRVHLALPDIPLIASGGIANGIDAAKAIALGADLVGQAAAVLAHANASG 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DA +A +L + ++ F G+ +Q L T L Sbjct: 307 DAAIAHFRTLITQLRIACFCTGSANLQALRHATLL 341 >gi|324325615|gb|ADY20875.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP ++D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ PH V + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPHGVFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A +AV ++ A+ L +HLN +QE+ P G+ +F + ++ + Sbjct: 122 NLGS-----EATTEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRVEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|293572993|ref|ZP_06683935.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E980] gi|291606895|gb|EFF36275.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E980] Length = 351 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 179/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ +RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIVRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G + L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMVGATNIATLHQQSLIFSG 327 >gi|15897029|ref|NP_341634.1| isopentenyl pyrophosphate isomerase [Sulfolobus solfataricus P2] gi|284173373|ref|ZP_06387342.1| isopentenyl pyrophosphate isomerase [Sulfolobus solfataricus 98/2] gi|2829821|sp|P95997|IDI2_SULSO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1707831|emb|CAA69539.1| orf c05008 [Sulfolobus solfataricus P2] gi|13813194|gb|AAK40424.1| FMN-dependent dehydrogenase, conserved hypothetical [Sulfolobus solfataricus P2] gi|261601683|gb|ACX91286.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus solfataricus 98/2] Length = 368 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 193/341 (56%), Gaps = 9/341 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK++H+ I ++ + F +D L+H+ P ISF E++ +F K++S P++ Sbjct: 4 IVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISAPIM 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++ MTGG + RINR +A AEK + M VGSQRV A +SF +R+ AP + Sbjct: 64 VTGMTGG-RNELGRINRIIAEVAEKFGIPMGVGSQRVAIEKAEARESFTIVRKVAPTIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALL 178 I+NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + ++ + Sbjct: 123 IANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALERLRDI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----D 233 S + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ + Sbjct: 183 SKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAE 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F DWG+PT S+ R +A + SGG+R+G+D K+I LGA + G+A P LK Sbjct: 243 SAKNFLDWGVPTAASIIEVRYSIPDAFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++ +++ + E +M L G+K V+ L ++ +I Sbjct: 303 AIEGKESLEQFFRKIIFELKATMMLTGSKNVEALKRSSIVI 343 >gi|229090560|ref|ZP_04221795.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-42] gi|228692763|gb|EEL46487.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-42] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHADLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|152975022|ref|YP_001374539.1| isopentenyl pyrophosphate isomerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189044239|sp|A7GN36|IDI2_BACCN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|152023774|gb|ABS21544.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cytotoxicus NVH 391-98] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 172/336 (51%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++HI F D +H++LP SF+ V + LS P+ I+ Sbjct: 4 EKRKLEHIEYALSTG--QSRTHGFCDIEFVHKSLPNSSFESVTCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ + + S+ +R+ P+ ++ + Sbjct: 62 AMTGGGGERTLHINEQLAYVAKHHHLAMAVGSQMAALKEKREVDSYRIVRRVNPNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAKCAVDMIEANALQIHLNVIQELTMPEGDRDFKGVLKRIENIVLT 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + + F DW Sbjct: 177 SEVPVIVKEVGFGMSKETVQQLANIGVTAIDIGGQGGTNFAAVENERR--NRMLSYFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N IASGG++ +D+ K+I LGA A FL+ M + D Sbjct: 235 GIQTASSIIEASSTNNTLSLIASGGIQTALDVAKAIALGAQATAFAGYFLRILMNEGMDT 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ +E L + M LG K + EL +++ Sbjct: 295 LIEEVELLHTDLRFIMTALGAKNILELQQVPLVVKG 330 >gi|228914172|ref|ZP_04077790.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300117473|ref|ZP_07055263.1| isopentenyl pyrophosphate isomerase [Bacillus cereus SJ1] gi|228845505|gb|EEM90538.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|298725308|gb|EFI65960.1| isopentenyl pyrophosphate isomerase [Bacillus cereus SJ1] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHADLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|269941931|emb|CBI50342.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TW20] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D++KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDVIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|254166633|ref|ZP_04873487.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|289596403|ref|YP_003483099.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|197624243|gb|EDY36804.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|289534190|gb|ADD08537.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] Length = 337 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 195/337 (57%), Gaps = 8/337 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++HI I D ++ + +++D L H +P++ + V+ SVEFLGKKL++P++ Sbjct: 1 MIENRKLEHIKIC-ADKDVNSHHNYWNDVVLKHETIPKVDMENVELSVEFLGKKLNYPII 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG+ K+ + IN NLA AAE+ + MAVGSQR + ++ + + I Sbjct: 60 IDAMTGGH-KVAKLINENLAAAAEELGIGMAVGSQRAAIENTKLEDTYSVVAKYDMPLRI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q +G ++ +A+ ++ A + +H N LQE IQP G+T +L +A L+ Sbjct: 119 GNLGAPQFALGYGEEEVKKAIEMIDAHAIDIHFNYLQEAIQPEGDTKVGNLRENLAELAR 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 L+ KE G G+S E +G + D++G GTS++ +E +R E G +F D Sbjct: 179 --KYKLIAKETGAGISRNAAEFFKNAGFKAIDVSGVSGTSFAAVEYYRGGEE--GKLFWD 234 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+P P + + I SGG+RNG+D K+I LGA + G+A LKPAM S + Sbjct: 235 WGLPAPYCILSLKDL--NMPLIGSGGIRNGLDAAKAIALGADVVGIARILLKPAMKSKED 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + KE +++FL+G + V+EL ++R + Sbjct: 293 VIKVLERIIKELRIAVFLIGAESVKELKNAKYVVRGE 329 >gi|229058233|ref|ZP_04196621.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH603] gi|228720097|gb|EEL71681.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH603] Length = 349 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 174/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVVRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ GI DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETVQQLANIGITAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILIQDGVEN 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGVKTIEELQSVPLVVKGE 331 >gi|119872601|ref|YP_930608.1| isopentenyl pyrophosphate isomerase [Pyrobaculum islandicum DSM 4184] gi|166226204|sp|A1RTI3|IDI2_PYRIL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119674009|gb|ABL88265.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum islandicum DSM 4184] Length = 354 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 16/342 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + +FD+ L+H ALPEI EVD + FLG K++ P I Sbjct: 3 IDKRKNDHIYLA-SSEISQVGSPWFDEVILLHNALPEIDLSEVDITTRFLGVKVNAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG + +IN LA AE+ + + VGSQRV +FE+ ++ AP + Sbjct: 62 GAMTGGTE-LAGKINAELAKIAEEFGIPIYVGSQRVALMKPEVRWTFEVVKKNAPSVPKV 120 Query: 121 SNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL + + QAV ++ A + +HLN QE+IQP G F + KI + Sbjct: 121 ANLGAPQLAELSDEKLAEWVSQAVDMIDAYAIAIHLNAAQEVIQPEGEPRFRGVFEKIKV 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE------ 231 + A P+++KEVG G+S ++ D+ G GGTS+ IE R E Sbjct: 181 VRKAAGRPVIVKEVGNGISKEVASRLVEV-ADAIDVGGYGGTSFIAIEGARAAESGSSMR 239 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + VF+ WGIPT S+ AR IASGG+R+G+D K++ LGA ++ PFL Sbjct: 240 RRVAEVFKSWGIPTAASICEARSGYRGY-IIASGGIRSGLDGAKALALGADFFTMSQPFL 298 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K A++ + IE++ E ++MFL G++ +++L + Sbjct: 299 KAALEGR--LREEIETVIAEVKIAMFLTGSRTIEDLKSAPRV 338 >gi|52143849|ref|YP_082979.1| isopentenyl pyrophosphate isomerase [Bacillus cereus E33L] gi|81688715|sp|Q63DN3|IDI2_BACCZ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51977318|gb|AAU18868.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus E33L] Length = 349 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +I+ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVIKGE 331 >gi|303243470|ref|ZP_07329812.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanothermococcus okinawensis IH1] gi|302486031|gb|EFL48953.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanothermococcus okinawensis IH1] Length = 355 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 193/345 (55%), Gaps = 12/345 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ +VC ++ K DD LIHR + + +D S+E GKKL PL+ Sbjct: 6 IEFRKLEHL-LVCNYCDVEYKKGTLLDDVELIHRGISNCDLNNIDTSIELFGKKLDAPLI 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++++TGG++K E IN+N+A A E+ + M VGSQR + + I ++ + + +++I Sbjct: 65 VAAITGGHSKARE-INKNIAKAVEELNLGMGVGSQRAGLLNSSLIDTYSVVRDYTSSLVI 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL- 178 NLGAV D + ++V+++ A+ + +H NPLQE IQP G+ NF + + Sbjct: 124 GNLGAVNFIEDGWDEDIIDKSVNMVDANAMAIHFNPLQEAIQPEGDVNFKGIYILKNTIE 183 Query: 179 ---SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLES 232 ++P + K+VG G S D E+ G D+ G GGTSW+ +E HR + Sbjct: 184 DYKKKYKNIPFIAKQVGEGFSREDAEILKNIGFDGIDVGGSGGTSWAAVEYHRIKDENLK 243 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + F +WGIPT S+ R + I +GG+R+G+DI KS+ +GA G+A P LK Sbjct: 244 NFSKQFLEWGIPTAASILEVRSVF-DGTVIGTGGIRSGMDIAKSMAIGADCCGVALPILK 302 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ SSD V+ +E + KE MFL+G +++L + +I+++ Sbjct: 303 AALRSSDEVINVLEKMIKELKTVMFLVGCDSIEDLKKSRYIIKNE 347 >gi|254262159|emb|CAZ90488.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter turicensis] Length = 349 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 130/335 (38%), Positives = 183/335 (54%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV D + + FD W H ALPE+ D +D S + L P+LIS Sbjct: 8 QRKNDHLDIVLHPDRAMSTIRTGFDAWRFEHCALPELDLDGIDLSTTLFSRPLKAPVLIS 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLIS 121 SMTGG + + INR+LA AA+ +AM VGSQRV D +LR AP L++ Sbjct: 68 SMTGGAARARD-INRHLAQAAQTLGLAMGVGSQRVALEDGAQHGLDAQLRHIAPDVPLLA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G+ A +AV ++ AD L +HLNPLQE +Q G+ ++ + + IA L Sbjct: 127 NLGAAQIRGAQGLDYARRAVDMIDADALIVHLNPLQEALQGGGDRDWRGILNAIAQLVRD 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVF 238 + VP+++KEVG G+S G+ DIAG GGTSW+ +E+ R ++ + F Sbjct: 187 LPVPVVVKEVGAGISPDVACRLADVGVTMIDIAGAGGTSWAAVEAERAPTPEARNVAMAF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG+ NG+D K+I LGA L G A+ L A S Sbjct: 247 ADWGIPTADALRRVHLALPDIPLIASGGIANGIDAAKAIALGADLVGQAAAVLAHANASG 306 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 DA +A +L + V+ F G+ ++ L T L Sbjct: 307 DAAIAHFRTLIAQLRVACFCTGSANLKALRHATLL 341 >gi|227524489|ref|ZP_03954538.1| isopentenyl pyrophosphate isomerase [Lactobacillus hilgardii ATCC 8290] gi|227088359|gb|EEI23671.1| isopentenyl pyrophosphate isomerase [Lactobacillus hilgardii ATCC 8290] Length = 343 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 16/339 (4%) Query: 1 MVND---RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M++ RK +HI++ K ++ F +H++LP+ + E+D S + L Sbjct: 1 MISKHSHRKDEHISLAEKFY---QDTDVFAPLRFVHQSLPKYALSEIDLSTKIGPINLQI 57 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPH 116 P I +++GG+ + IN+ LA A+KT +AMAVGSQ V D + +++F + R+ P Sbjct: 58 PFYIEAISGGSPH-TKDINQKLATIAKKTGLAMAVGSQSVALGDASLVETFTVAREVNPD 116 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +L +N+GA D V A AV ++ AD L LH+NP QE+I P G+ F + + I Sbjct: 117 GLLFANIGA-----DKTVDDARHAVAMIDADALELHVNPAQELIMPEGDRQF-NFLTNIK 170 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + VP+++KEVG G+S I+ G+ Y +++G GGT ++ IE+ R + ++ Sbjct: 171 QIVEGLSVPVIVKEVGFGMSRETIQQLADLGVGYVNVSGHGGTDFAEIENFRRRDKEMA- 229 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM- 295 ++WG+ TP SL +RP+ + +ASGG+++ DI K + LG+ G+A FL + Sbjct: 230 YLKNWGLTTPESLMESRPFQDRLTVLASGGIKSPSDIAKCLALGSHAVGVAGTFLHLVIH 289 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ D V+ IE + M L +K + EL ++ Sbjct: 290 ENIDEVIRVIEQWQYGLKTIMMLTNSKNITELQKKKLIL 328 >gi|15669053|ref|NP_247857.1| isopentenyl pyrophosphate isomerase [Methanocaldococcus jannaschii DSM 2661] gi|2842579|sp|Q58272|IDI2_METJA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|1591547|gb|AAB98867.1| carotenoid biosynthetic gene ERWCRTS isolog [Methanocaldococcus jannaschii DSM 2661] Length = 359 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 190/343 (55%), Gaps = 10/343 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++HI + +D LIH+ I+F++++ +E GKKLS P+++ Sbjct: 8 IEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIV 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S MTGG++K E IN+N+A A E+ + M VGSQR + I ++ + + + ++I Sbjct: 68 SGMTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNLVIG 126 Query: 122 NLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS- 179 NLGAV D + + +A+ ++ AD + +H NPLQEIIQP G+ NF +L ++S Sbjct: 127 NLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFNPLQEIIQPEGDLNFKNLYKLKEIISN 186 Query: 180 ---SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI-- 234 S ++P + K+VG G S D + G D+ G GGTSW+++E +R E +I Sbjct: 187 YKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVKEEEIKR 246 Query: 235 -GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F +WGIPT S+ + + I SGG+R G+DI K I +G +A P LK Sbjct: 247 LAEKFANWGIPTAASIFEVKSVYDGI-VIGSGGIRGGLDIAKCIAIGCDCCSVALPILKA 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ + VV +ES KE ++MFL+G + ++EL + +++ Sbjct: 306 SLKGWEEVVKVLESYIKELKIAMFLVGAENIEELKKTSYIVKG 348 >gi|47565961|ref|ZP_00236999.1| isopentenyl diphosphate isomerase [Bacillus cereus G9241] gi|47556878|gb|EAL15208.1| isopentenyl diphosphate isomerase [Bacillus cereus G9241] Length = 349 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|301053137|ref|YP_003791348.1| isopentenyl pyrophosphate isomerase [Bacillus anthracis CI] gi|300375306|gb|ADK04210.1| isopentenyl pyrophosphate isomerase [Bacillus cereus biovar anthracis str. CI] Length = 349 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHADLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|89255375|ref|NP_659793.2| isopentenyl pyrophosphate isomerase [Rhizobium etli CFN 42] gi|89213329|gb|AAM54807.2| putative isopentenyl-diphosphate delta-isomerase protein [Rhizobium etli CFN 42] Length = 377 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+++V ++ H ALPE+ +++ LGK + PLL Sbjct: 28 LTRRKDDHLDLVLDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAPLL 87 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP L Sbjct: 88 ISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDIPL 146 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A + Sbjct: 147 LANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVARAA 206 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGI 236 ++ VP++ KEVG GLS+ +++G+ D+AG GGTSW+ +E + + + Sbjct: 207 RSVGVPIVAKEVGWGLSASVACALVEAGVEVIDVAGAGGTSWAAVEGELARDAAGRAVAM 266 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPTP SL+ R + IASGG+R+GVD+ K+I LGA + G A+ L A Sbjct: 267 AFADWGIPTPASLQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAATV 326 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S++AVVA E + ++ V+ F G+ + L L Sbjct: 327 STEAVVAHFEVVIRQLAVACFCTGSPDLATLRQARLL 363 >gi|21283996|ref|NP_647084.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MW2] gi|49487129|ref|YP_044350.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|297209838|ref|ZP_06926234.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910849|ref|ZP_07128299.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH70] gi|24211788|sp|Q8NV55|IDI2_STAAW RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|56748949|sp|Q6G6X4|IDI2_STAAS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|21205439|dbj|BAB96132.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus MW2] gi|49245572|emb|CAG44050.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|296885511|gb|EFH24448.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887829|gb|EFK83024.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH70] Length = 349 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMYSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|298253294|ref|ZP_06977086.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis 5-1] gi|297532689|gb|EFH71575.1| isopentenyl pyrophosphate isomerase [Gardnerella vaginalis 5-1] Length = 779 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 21/347 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK------KL 55 + +RK HI + K R FD + ALP+++ +E+D SV LG + Sbjct: 435 IQNRKDAHIALADKQYK-TRADSDFDKVRFVPNALPQVALEEIDDSVSVLGSEVCDSVRW 493 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYA 114 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F + R Sbjct: 494 CSPIYINAMTGGSD-AAKKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSEN 552 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 PH +++N+ A A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 553 PHGFVMANVSA-----GTSASDALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLCN 607 Query: 175 IALL---SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + A+ VP+++KE GCG+S+ D+ G+R D++GRGGT++ IE+ R Sbjct: 608 IESIVSACEALSVPVIVKETGCGISAKDVHRLKDVGVRTVDVSGRGGTNFVTIENARRNL 667 Query: 232 SDIGIVFQDWGIPTPLSLEMAR--PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 D DWG+ T SL R + ASGG+R +D+++++ LGAS G+A Sbjct: 668 GDCD-YLADWGLTTVESLVDIRKCDSLKNMEVFASGGVRTPLDVVRALALGASAVGVAGE 726 Query: 290 FLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 727 FLHTLMHEGEDALSLQIDNWKKQIRVIMALLGCKTVKDLQEKTEFVR 773 >gi|256811063|ref|YP_003128432.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus fervens AG86] gi|256794263|gb|ACV24932.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus fervens AG86] Length = 359 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 188/343 (54%), Gaps = 10/343 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++HI + + +D LIH+ I+F +++ + GKKLS P+++ Sbjct: 8 IEVRKLEHIFLCNYCDVEYKKTTLLEDIELIHKGTCGINFYDIETETKLFGKKLSAPIIV 67 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S +TGG++K E IN+N+A A E+ + M VGSQR + + I ++ + + + ++I Sbjct: 68 SGITGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIINDDLIDTYSVVRDYTNNLVIG 126 Query: 122 NLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS- 179 NLGAV D + + +AV ++ AD + +H NPLQE+IQP G+ NF +L ++S Sbjct: 127 NLGAVNFIVDNWDEEVVDKAVEMIDADAMAIHFNPLQEVIQPEGDLNFKNLDKLKEIISN 186 Query: 180 ---SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SD 233 S ++P + K+VG G S D + G D+ G GGTSW+++E +R + + Sbjct: 187 YKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVKDEKIKN 246 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + F +WGIPT S+ + + I SGG+R G+DI K I +G +A P LK Sbjct: 247 LLEKFANWGIPTAASIFEVKSVYDGI-VIGSGGIRGGLDIAKCIAIGCDCCAVALPILKA 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ + VV +E KE ++MFL+G + ++EL +++ Sbjct: 306 SLKGWEEVVKVLEEYIKELKIAMFLVGAENIEELKKTPYIVKG 348 >gi|254262248|emb|CAZ90575.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter helveticus] Length = 346 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 123/335 (36%), Positives = 185/335 (55%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV ++ F+ W H ALPE+ D ++ GKKL P+LIS Sbjct: 7 QRKNDHLDIVLDPARATNKVTTGFERWRFEHCALPELDLDSINLETLLFGKKLKAPVLIS 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTVLIS 121 SMTGG + + IN++LA AA+ +AM VGSQRV +++ + ELR+ AP L++ Sbjct: 67 SMTGGAQRA-QHINQHLAQAAQTLGLAMGVGSQRVALEAENDFGLTGELRRIAPDIPLLA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ G A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I A Sbjct: 126 NLGAAQIAGPGGADYARRAVEMIQADALIIHLNPLQEALQNRGDRDWRGVLAAIRRTVEA 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 + VP+++KEVG GLS + +++G+ D+AG GGTSW+ +E R + + + F Sbjct: 186 LSVPVVVKEVGAGLSLPVAKQLVEAGVAMLDVAGAGGTSWAAVEGERAATSRQRAVAMAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L IASGG+ NG+D K++ LGA L G A+ L A S Sbjct: 246 ADWGIPTARALRDLHDGLPGTPLIASGGINNGIDAAKALRLGAHLVGQAAAVLGSANTSQ 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AV+ L ++ V+ F G+ + L + Sbjct: 306 EAVIDHFAVLIEQLRVACFCTGSADLVALRAAPLI 340 >gi|326803269|ref|YP_004321087.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aerococcus urinae ACS-120-V-Col10a] gi|326650721|gb|AEA00904.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aerococcus urinae ACS-120-V-Col10a] Length = 350 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 98/335 (29%), Positives = 173/335 (51%), Gaps = 11/335 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI + D +++ FD +H +LP I D+V + G++ FP I Sbjct: 1 MKNRKDDHIKLA--DWQYNQSPTDFDAIRFVHHSLPHIDADQVQLDTQVFGQEFPFPFFI 58 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 ++MTGG+ + IN A A +T + MA GS + SF+ +RQ P +I Sbjct: 59 NAMTGGSE-WTKAINEKFATVARETGLMMATGSVSQAIKNPQTADSFQIVRQTNPQGFII 117 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + G++ A +A+ + A+ L +HLN QE+ P G+ +F + I + Sbjct: 118 ANVG-----MNHGLEGAKKALEITDANALAIHLNTPQELAMPEGDRHFQAVKDNIQAIVE 172 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D P+++KEVG G+S IE L G++ D++G+GGT++ IE+ R D+ + Sbjct: 173 GVDRPVMVKEVGFGMSRETIEELLDLGVQTIDVSGQGGTNFIAIENERRSHKDMDYM-TQ 231 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG T +SL A+ + N+ IASGG++ + +L S+ LG G++ FL + Sbjct: 232 WGQSTAISLLEAQAFKNQVDLIASGGVKTPLHVLISLALGVKAVGMSGQFLHLVLNHGVQ 291 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +E + + + M L ++++ +L +I Sbjct: 292 ETIDWVEEFKNQVRLLMTLTNSQKLSDLEKTDLVI 326 >gi|163800106|ref|ZP_02194007.1| isopentenyl pyrophosphate isomerase [Vibrio sp. AND4] gi|159175549|gb|EDP60343.1| isopentenyl pyrophosphate isomerase [Vibrio sp. AND4] Length = 339 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 130/335 (38%), Positives = 183/335 (54%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H++ V D + F+ H ALPE F +D S FLG +L+ P LIS Sbjct: 6 NRKDLHLDAVLHHDMSMKSKTAGFESVEFEHCALPECDFSAIDLSRTFLGHQLALPFLIS 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-NAIKSFELRQYAPHTVLIS 121 SMTGG K E IN LA AA + +AM VGSQRV D ++ +R A L S Sbjct: 66 SMTGGA-KEAETINCRLAEAASEMGIAMGVGSQRVSLEDRLHSGLGKTIRDLAKGIPLYS 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA QL G AH+AV + AD LF+HLNP+QE Q NG+ ++ + I L Sbjct: 125 NLGAAQLRDRQGFDNAHRAVDFIQADALFVHLNPMQEAFQKNGDHDWIGVLKSIEQLKLR 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIVF 238 +D+P+++KEVG G+S + ++ G+ D+AG GGTSWS +E + +S + +F Sbjct: 185 LDMPMIIKEVGFGISCVVARQLVEVGVDAIDVAGAGGTSWSAVEGYCQTDSKMQRAAELF 244 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 +DWGIPT LE R + +ASGG+ NG++ K+I LGA L G A LK A S+ Sbjct: 245 RDWGIPTATCLEQIRSQYPDLPLLASGGVYNGLEAAKAIHLGAHLVGQAGAVLKAATIST 304 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++V+ E + E ++ F G+ +Q L L Sbjct: 305 ESVIEHFEQMALELRLACFGTGSVNLQMLTQARRL 339 >gi|82751941|ref|YP_417682.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus RF122] gi|91207076|sp|Q2YYY9|IDI2_STAAB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|82657472|emb|CAI81914.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus RF122] Length = 349 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y ++ ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSKISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|282917697|ref|ZP_06325448.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus D139] gi|283767435|ref|ZP_06340350.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus H19] gi|282318452|gb|EFB48811.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus D139] gi|283461314|gb|EFC08398.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus H19] gi|298695607|gb|ADI98829.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ED133] gi|302333979|gb|ADL24172.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus JKD6159] gi|323439971|gb|EGA97686.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus O11] gi|323443694|gb|EGB01307.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus O46] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|57650889|ref|YP_187147.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus COL] gi|87160251|ref|YP_494927.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196264|ref|YP_501084.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222459|ref|YP_001333281.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|161510539|ref|YP_001576198.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141279|ref|ZP_03565772.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253730016|ref|ZP_04864181.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734240|ref|ZP_04868405.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus TCH130] gi|258452767|ref|ZP_05700763.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A5948] gi|262049807|ref|ZP_06022671.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus D30] gi|262052113|ref|ZP_06024322.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus 930918-3] gi|282925234|ref|ZP_06332893.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9765] gi|284025369|ref|ZP_06379767.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus 132] gi|294848887|ref|ZP_06789632.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9754] gi|304379537|ref|ZP_07362271.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|71152145|sp|Q5HDL0|IDI2_STAAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|122538789|sp|Q2FVR9|IDI2_STAA8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|123484672|sp|Q2FEF1|IDI2_STAA3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|172049061|sp|A6QJI7|IDI2_STAAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044245|sp|A8Z536|IDI2_STAAT RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|57285075|gb|AAW37169.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus COL] gi|87126225|gb|ABD20739.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203822|gb|ABD31632.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150375259|dbj|BAF68519.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|160369348|gb|ABX30319.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726229|gb|EES94958.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727935|gb|EES96664.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus TCH130] gi|257859530|gb|EEV82382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A5948] gi|259160014|gb|EEW45049.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus 930918-3] gi|259162114|gb|EEW46692.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus D30] gi|282592635|gb|EFB97644.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9765] gi|294824266|gb|EFG40690.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9754] gi|302752217|gb|ADL66394.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341882|gb|EFM07787.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198111|gb|EFU28442.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS01] gi|320140113|gb|EFW31972.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143383|gb|EFW35164.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus MRSA177] gi|329315033|gb|AEB89446.1| Isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus T0131] gi|329726070|gb|EGG62543.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21189] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|49484561|ref|YP_041785.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257423828|ref|ZP_05600257.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257426510|ref|ZP_05602912.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429147|ref|ZP_05605534.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus 68-397] gi|257431793|ref|ZP_05608156.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus E1410] gi|257434753|ref|ZP_05610804.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M876] gi|282902256|ref|ZP_06310149.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C160] gi|282906686|ref|ZP_06314534.1| isopentenyl-diphosphate delta-isomerase type 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909663|ref|ZP_06317472.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911908|ref|ZP_06319704.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915203|ref|ZP_06322980.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M899] gi|282920927|ref|ZP_06328645.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C427] gi|282925833|ref|ZP_06333481.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C101] gi|283959126|ref|ZP_06376567.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293497601|ref|ZP_06665455.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293511178|ref|ZP_06669875.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M809] gi|293549787|ref|ZP_06672459.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M1015] gi|295428926|ref|ZP_06821550.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589580|ref|ZP_06948221.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MN8] gi|56749002|sp|Q6GE88|IDI2_STAAR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|49242690|emb|CAG41413.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272846|gb|EEV04948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257276141|gb|EEV07592.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279628|gb|EEV10215.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus 68-397] gi|257282672|gb|EEV12804.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus E1410] gi|257285349|gb|EEV15465.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M876] gi|282312662|gb|EFB43066.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C101] gi|282315342|gb|EFB45726.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C427] gi|282320924|gb|EFB51258.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M899] gi|282323604|gb|EFB53920.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326237|gb|EFB56541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329585|gb|EFB59106.1| isopentenyl-diphosphate delta-isomerase type 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282596715|gb|EFC01674.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus C160] gi|283471567|emb|CAQ50778.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus ST398] gi|283788718|gb|EFC27545.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290918834|gb|EFD95910.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus M1015] gi|291096532|gb|EFE26790.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291466165|gb|EFF08694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus M809] gi|295127275|gb|EFG56917.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297578091|gb|EFH96804.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus MN8] gi|312437239|gb|ADQ76310.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus subsp. aureus TCH60] gi|315193609|gb|EFU24005.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS00] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMTYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|13878549|sp|P58052|IDI2_STAAU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|12539425|dbj|BAB21468.1| isopentenyl diphosphate isomerase [Staphylococcus aureus] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMTYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|329730063|gb|EGG66453.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21193] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKAIGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|229096090|ref|ZP_04227063.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-29] gi|229115046|ref|ZP_04244456.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-3] gi|228668186|gb|EEL23618.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock1-3] gi|228687050|gb|EEL40955.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-29] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDEREAASYKVVRKINPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKIPVIVKEVGFGMSKETVQQLVSIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTTTSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVGEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|229172236|ref|ZP_04299800.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus MM3] gi|228611224|gb|EEK68482.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus MM3] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 173/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H+ LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQGLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+ + R+ P+ V + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYTIIRKVNPNGVFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETVQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIRTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQAVPLVVKGE 331 >gi|269968155|ref|ZP_06182188.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 40B] gi|269827223|gb|EEZ81524.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 40B] Length = 339 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 128/336 (38%), Positives = 180/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFHAIDLSTEFLGHQLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-KDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKEVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I +L S Sbjct: 124 SNLGAAQLLDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWVGVFQAIEMLKS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 + VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVKVPIIIKEVGFGISGHVAQRLIDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWG+PT L R IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGVPTATCLAQIRALHPTLPLIASGGVHNGLEAAKAIHLGANLIGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +VV E + E ++ F G+ +V EL L Sbjct: 304 TQSVVDHFEQMALELRLACFGTGSFKVGELTKARCL 339 >gi|302557474|ref|ZP_07309816.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptomyces griseoflavus Tu4000] gi|302475092|gb|EFL38185.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptomyces griseoflavus Tu4000] Length = 367 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 177/336 (52%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK H+ + FDD +H AL I +V F G + PL Sbjct: 1 MIAERKDAHVRFATEQHRRHTGHNQFDDVSFVHHALAGIDRSDVSTVTRFGGMEWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K E INR+LAIAA +T V++A GS F+D + +F + R+ P + Sbjct: 61 INAMTGGSPKTGE-INRDLAIAARETGVSIATGSISPYFADESVADTFSVMRKENPGGFI 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A + V+KA +AV +L AD L +H+N +QE + P G+ FA +I ++ Sbjct: 120 LANVNA-----NATVEKARRAVDLLQADALQIHVNVIQETVMPEGDRLFASWGPRIEEIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVPL++KEVG GLS + + G+R D++G GGT ++RIE+ R D Sbjct: 175 AGVDVPLIVKEVGFGLSRETLLRLREMGVRVADVSGSGGTDFARIENDRRDRPDYS-YLN 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG T L A+ +ASGG+R+ +D+++++ LGAS G + FL+ +D Sbjct: 234 GWGQSTAACLLDAQGV--GLPVLASGGVRHPLDVVRALALGASAVGASGLFLRTVLDGGA 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A+++ + S + M LG +L L+ Sbjct: 292 PALISLLSSWIDQLTALMTALGAPTPADLTRCDVLV 327 >gi|148268783|ref|YP_001247726.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus JH9] gi|150394853|ref|YP_001317528.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus JH1] gi|253314686|ref|ZP_04837899.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|257794688|ref|ZP_05643667.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9781] gi|258408708|ref|ZP_05680992.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9763] gi|258422304|ref|ZP_05685216.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9719] gi|258439696|ref|ZP_05690442.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9299] gi|258442747|ref|ZP_05691307.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8115] gi|258446553|ref|ZP_05694708.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6300] gi|258450330|ref|ZP_05698422.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6224] gi|258455294|ref|ZP_05703254.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A5937] gi|269203977|ref|YP_003283246.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus ED98] gi|282893790|ref|ZP_06302022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A8117] gi|282926898|ref|ZP_06334525.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A10102] gi|295405032|ref|ZP_06814845.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8819] gi|296275432|ref|ZP_06857939.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus MR1] gi|297244089|ref|ZP_06927979.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8796] gi|189044243|sp|A6U473|IDI2_STAA2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189044244|sp|A5IVC7|IDI2_STAA9 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|147741852|gb|ABQ50150.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus JH9] gi|149947305|gb|ABR53241.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus JH1] gi|257788660|gb|EEV27000.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9781] gi|257840391|gb|EEV64851.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9763] gi|257841735|gb|EEV66172.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9719] gi|257847472|gb|EEV71474.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A9299] gi|257851868|gb|EEV75802.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8115] gi|257854621|gb|EEV77569.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6300] gi|257856422|gb|EEV79331.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A6224] gi|257862505|gb|EEV85273.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A5937] gi|262076267|gb|ACY12240.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus ED98] gi|282591349|gb|EFB96422.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A10102] gi|282763848|gb|EFC03976.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A8117] gi|285818009|gb|ADC38496.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Staphylococcus aureus 04-02981] gi|294969977|gb|EFG45995.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8819] gi|297178867|gb|EFH38112.1| isopentenyl-diphosphate delta-isomerase [Staphylococcus aureus A8796] gi|312830693|emb|CBX35535.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128734|gb|EFT84735.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus CGS03] gi|329723556|gb|EGG60085.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus subsp. aureus 21172] Length = 349 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|81428516|ref|YP_395516.1| isopentenyl pyrophosphate isomerase [Lactobacillus sakei subsp. sakei 23K] gi|91207071|sp|Q38X74|IDI2_LACSS RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78610158|emb|CAI55207.1| Isopentenyl diphosphate delta-isomerase (IPP isomerase) [Lactobacillus sakei subsp. sakei 23K] Length = 349 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 99/334 (29%), Positives = 174/334 (52%), Gaps = 11/334 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K DR + FD IH++LPE++ +VD S +F G P I+ Sbjct: 10 SHRKDEHVFLAEKFHQDDR-QNDFDGLRFIHQSLPELAIADVDISTQFAGTTWQSPFYIN 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 MTGG+ + +++N LA A+ + MA GSQ V D + +F + R++ P +++ Sbjct: 69 GMTGGSQQ-TKKLNAQLAQVAQIAGLPMATGSQSVAIKDPTLVDTFSVIREFNPAGFILA 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA + A +AV + A+ L +H+N QE++ P G+ F +I + + Sbjct: 128 NIGAGN-----DLSVAQKAVAMTQANALEIHVNTAQEVVMPEGDREFY-WLDQIGEIVAN 181 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+S+ I G+ D++G+GGT++ IE+ R + DW Sbjct: 182 LDVPVIVKEVGFGMSAETIAKLQSVGVTNIDVSGKGGTNFVTIENERRRDKAYD-YLSDW 240 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL ++ + E +ASGG+RN +DI+K++ LGAS G++ L + Sbjct: 241 GQSTVESLFESQAFQTELTILASGGIRNPLDIVKALRLGASAVGISGQILHMLIKTGPTE 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + M +LG + + L ++ Sbjct: 301 TAEQLLAWQAQIQSIMAILGARNLTALQSAPMIL 334 >gi|13878560|sp|Q9KWG2|IDI2_STRC1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|9695273|dbj|BAB07793.1| hypothetical protein [Streptomyces sp. CL190] gi|12539423|dbj|BAB21467.1| isopentenyl diphosphate isomerase [Streptomyces sp. CL190] Length = 363 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 12/340 (3%) Query: 1 MVN-DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M + RK DH+ + + + FDD +H AL I +V + F G P+ Sbjct: 1 MTSAQRKDDHVRLAIEQHNAHSGRNQFDDVSFVHHALAGIDRPDVSLATSFAGISWQVPI 60 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 I++MTGG+ K INR+LA AA +T V +A GS D + +F + R P+ Sbjct: 61 YINAMTGGSEK-TGLINRDLATAARETGVPIASGSMNAYIKDPSCADTFRVLRDENPNGF 119 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I+N+ A V A +A+ ++ A+ L +H+N QE P G+ +FA +I + Sbjct: 120 VIANINATT-----TVDNAQRAIDLIEANALQIHINTAQETPMPEGDRSFASWVPQIEKI 174 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 ++A+D+P+++KEVG GLS I L G++ D++GRGGT ++RIE+ R D Sbjct: 175 AAAVDIPVIVKEVGNGLSRQTILLLADLGVQAADVSGRGGTDFARIENGRRELGDYAF-L 233 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 WG T L A+ +ASGG+R+ +D+++++ LGA G ++ FL+ M D Sbjct: 234 HGWGQSTAACLLDAQDIS--LPVLASGGVRHPLDVVRALALGARAVGSSAGFLRTLMDDG 291 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 DA++ + + + +LG + +L L+ + Sbjct: 292 VDALITKLTTWLDQLAALQTMLGARTPADLTRCDVLLHGE 331 >gi|254167243|ref|ZP_04874095.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] gi|197623506|gb|EDY36069.1| isopentenyl-diphosphate delta-isomerase, type 2 [Aciduliprofundum boonei T469] Length = 337 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 195/337 (57%), Gaps = 8/337 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK++HI I D ++ + +++D L H +P++ + V+ SVEFLGKKL++P++ Sbjct: 1 MIENRKLEHIKIC-ADKDVNSHHNYWNDVVLKHETIPKVDMENVELSVEFLGKKLNYPII 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG+ K+ + IN NLA AAE+ + MAVGSQR + ++ + + I Sbjct: 60 IDAMTGGH-KVAKLINENLAAAAEELGIGMAVGSQRAAIENTKLEDTYSVVAKYDIPLRI 118 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q +G ++ +A+ ++ A + +H N LQE IQP G+T +L +A L+ Sbjct: 119 GNLGAPQFALGYGEEEVKKAIEMIDAHAIDIHFNYLQEAIQPEGDTKVGNLRENLAELAR 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 L+ KE G G+S E +G + D++G GTS++ +E +R E G +F D Sbjct: 179 --KYKLIAKETGAGISRNAAEFFKNAGFKAIDVSGVSGTSFAAVEYYRGGEE--GKLFWD 234 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+P P + + I SGG+RNG+D K+I LGA + G+A LKPAM S + Sbjct: 235 WGLPAPYCILSLKDL--NMPLIGSGGIRNGLDAAKAIALGADVVGIARILLKPAMKSKED 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +E + KE +++FL+G + V+EL ++R + Sbjct: 293 VIKVLERIIKELRIAVFLIGAESVKELKNAKYVVRGE 329 >gi|258423721|ref|ZP_05686608.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9635] gi|257846113|gb|EEV70140.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylococcus aureus A9635] Length = 349 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMDSDFDKMRFVHHSIPSINVNDIDLTSQTSDLTMAYPVYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T +AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|229160549|ref|ZP_04288544.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus R309803] gi|228622959|gb|EEK79790.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus R309803] Length = 349 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 177/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D N + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDENEVASYKIIRKINPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A++AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATTEQANRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SEVPVIVKEVGFGMSKETMQQLASIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|219852946|ref|YP_002467378.1| isopentenyl pyrophosphate isomerase [Methanosphaerula palustris E1-9c] gi|219547205|gb|ACL17655.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanosphaerula palustris E1-9c] Length = 354 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 125/345 (36%), Positives = 180/345 (52%), Gaps = 15/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK+DHI I +++ F LIH ALPE ++D V FLG PL I Sbjct: 7 TSSRKLDHIRIC-SQDEVEQGDPGFQGVSLIHNALPECDMGKIDTGVRFLGHLFGSPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++MTGG+ + IN LA AAE+ + M VGSQR + + +F + R+ AP L Sbjct: 66 AAMTGGHPETT-VINEQLARAAERFNLGMGVGSQRAALENPDLEGTFGVVREMAPSAFLC 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G VQL D G++ A +AV ++ D L +HLN LQE IQP G+ + + +A L Sbjct: 125 ANIGVVQLR-DHGIEWADRAVEMIRGDALAVHLNFLQEAIQPEGDHDARGCMAALASLCE 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-------- 232 P+++KE G G++ +G D GRGGTSW+ IE+ R ES Sbjct: 184 EASYPVIVKETGSGIAGETARRIAGAGAAAIDTGGRGGTSWAAIEAIRADESSRDQDRHL 243 Query: 233 -DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G F WGIPT SL P IA+GG+R G+D+ K++ LGA L G+A P L Sbjct: 244 VSLGEEFLSWGIPTVTSLCEVVPA--GLPVIATGGVRTGIDMAKAVALGADLAGMALPLL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 PA+ +++ IE L + V+MFL G+ + L +I Sbjct: 302 NPALKGEESLSNTIERLLHQLKVTMFLTGSPDIAALKRTRVIISG 346 >gi|229102202|ref|ZP_04232911.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-28] gi|228681103|gb|EEL35271.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-28] Length = 349 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D S+++ R+ P+ + + Sbjct: 62 AMTGGGGEQTLHINEQLAYVAKHHNLAMAVGSQMAALKDEREAASYKVVRKINPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEQIVLK 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKIPVIVKEVGFGMSKETVQQLVSIGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K I LGA+ A FL+ M D + Sbjct: 235 GIQTTTSIIEATSTNNNLSFIASGGIQTALDVAKVIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|91224188|ref|ZP_01259451.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 12G01] gi|91191099|gb|EAS77365.1| isopentenyl pyrophosphate isomerase [Vibrio alginolyticus 12G01] Length = 339 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 128/336 (38%), Positives = 180/336 (53%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +RK H++ V D + F+ H ALPE F +D S EFLG +L+ P LI Sbjct: 5 TNRKDLHLDAVLHHDMSMKHKTAGFESVEFEHCALPECDFHAIDLSTEFLGHQLALPFLI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG K E IN LA AA + +AM VGSQR+ + +R+ A L Sbjct: 65 SSMTGGA-KDAETINCRLAEAASELGIAMGVGSQRISLEESQHSGLGKTIRELAKEVPLY 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 SNLGA QL + A +AV + AD LF+H+NP+QE Q NG+ N+ + I +L S Sbjct: 124 SNLGAAQLLDKGKLDNAQRAVEAIQADALFVHVNPMQEAFQKNGDHNWVGVFQAIEMLKS 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI---GIV 237 + VP+++KEVG G+S + + +G+ D+AG GGTSWS +E + + + Sbjct: 184 RVKVPIIIKEVGFGISGHVAQRLIDAGVDAIDVAGAGGTSWSAVEGYCQDNPKMQRAAEL 243 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F+DWG+PT L R IASGG+ NG++ K+I LGA+L G A LK A S Sbjct: 244 FRDWGVPTATCLAQIRALHPTLPLIASGGVHNGLEAAKAIHLGANLIGQAGAVLKAATIS 303 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +VV E + E ++ F G+ +V EL L Sbjct: 304 TQSVVDHFEQMALELRLTCFGTGSFKVGELTKARCL 339 >gi|256761655|ref|ZP_05502235.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T3] gi|256682906|gb|EEU22601.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T3] Length = 356 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 11 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 69 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 128 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 183 EVPVIVKEVGFGMSQETLEKLTSIGVQAVDVSGQGGTSFTQIENARRKKRELSF-LDDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 242 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 301 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 302 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 336 >gi|229029278|ref|ZP_04185368.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1271] gi|228732026|gb|EEL82918.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus AH1271] Length = 349 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 173/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H+ LP S+D + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQGLPNSSYDTITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPKGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQAVPLVVKGE 331 >gi|118477053|ref|YP_894204.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis str. Al Hakam] gi|196046665|ref|ZP_03113889.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB108] gi|225863462|ref|YP_002748840.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB102] gi|229183793|ref|ZP_04311010.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BGSC 6E1] gi|166226195|sp|A0RBV4|IDI2_BACAH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|254803423|sp|C1EMZ6|IDI2_BACC3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|118416278|gb|ABK84697.1| isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis str. Al Hakam] gi|196022598|gb|EDX61281.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB108] gi|225788808|gb|ACO29025.1| isopentenyl-diphosphate delta-isomerase [Bacillus cereus 03BB102] gi|228599642|gb|EEK57245.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus BGSC 6E1] Length = 349 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 174/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ + + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + + Sbjct: 62 AMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 122 NLGS-----EATVEQAELAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +W Sbjct: 177 SKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M+ + Sbjct: 235 GIQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +V I+ L + M LG K ++EL +++ + Sbjct: 295 LVDEIDLLHTDLKFIMTALGAKTIEELQSVPLVVKGE 331 >gi|257887851|ref|ZP_05667504.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,141,733] gi|257823905|gb|EEV50837.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,141,733] Length = 351 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPIIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMVGATNTASLHQQSLIFSG 327 >gi|114705300|ref|ZP_01438208.1| isopentenyl-diphosphate delta-isomerase, type 2 [Fulvimarina pelagi HTCC2506] gi|114540085|gb|EAU43205.1| isopentenyl-diphosphate delta-isomerase, type 2 [Fulvimarina pelagi HTCC2506] Length = 367 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 134/337 (39%), Positives = 195/337 (57%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGIDR-NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKIDH++IV R D H ALPE++ DE+D SV FLG+ L PLL Sbjct: 23 IGSRKIDHLDIVLAQDERARFAATGLDRVIFEHVALPELALDEIDLSVPFLGRTLRAPLL 82 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + RIN +LA AAE +A+AVGSQRV LRQ AP + Sbjct: 83 ISSMTGGPERSA-RINDHLAEAAEALNIALAVGSQRVALEGRGGRGLDLTLRQRAPSVPI 141 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +SN+G Q +G +A +AV ++GAD L +HLNPLQE +Q G+T++ + S I L Sbjct: 142 LSNIGGAQFVLGYGEDEAMRAVEMIGADALIIHLNPLQEAVQTGGDTDWRGVLSAIERLC 201 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGI 236 + + VP+++KEVG G+S +++G+ D+AG GGTSW+++E+ R + I Sbjct: 202 ANLTVPVVVKEVGAGISGPVARRLVEAGVSVIDVAGAGGTSWAQVEAARAPDPRQKAIAE 261 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F WGI T ++ AR C E IASGG+RNG+++ ++I GA L G A+ LK A Sbjct: 262 LFAGWGIGTARAVADARLACPETPIIASGGIRNGIEVAQAIRCGADLAGQAAATLKAAET 321 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S++AV+A E + + + F G+ ++ L T + Sbjct: 322 STEAVIAHFEDVIRTLRIVCFCTGSASIEALKTATLV 358 >gi|295397030|ref|ZP_06807144.1| isopentenyl-diphosphate delta-isomerase [Aerococcus viridans ATCC 11563] gi|294974721|gb|EFG50434.1| isopentenyl-diphosphate delta-isomerase [Aerococcus viridans ATCC 11563] Length = 355 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 96/336 (28%), Positives = 173/336 (51%), Gaps = 11/336 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK H++ + F+ +H +L F+ +D S ++ P I++ Sbjct: 8 NRKDAHVHNA--EMQYQTAPTDFESVRFVHPSLSHQEFNNIDLSTTLFKQQFDRPFYINA 65 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ ++IN A A + + MA GS D + SF + R P+ L++N Sbjct: 66 MTGGSE-WTKKINGMFAEVARECHLPMASGSVSAALKDPSVADSFTIIRDVNPNGFLMAN 124 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA D ++ A +AV +L AD L +HLN QEI+ P G+ +F L I + + Sbjct: 125 VGA-----DKTLEDAKRAVDLLDADALQIHLNTAQEIVMPEGDRDFRKLEDNIVAIVEKL 179 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D P+++KEVG G+S + G+ D++G GGT++++IE+ R + + DWG Sbjct: 180 DRPVMVKEVGFGMSYQTMHHLQSLGVNTIDVSGTGGTNFAKIENARREHQEFAYM-ADWG 238 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T +SL A+P ++ +ASGG+++ + ++K++ LGAS G++ FL + + DA Sbjct: 239 QSTVISLLEAQPLMSQTAIVASGGIKDPMQMMKALALGASAVGMSGQFLHSVLGEGVDAT 298 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + ++S ++ + M +L + + EL +I + Sbjct: 299 IEMVKSYDEQLRLLMMVLDCQNLNELRDTDLMITGK 334 >gi|47605803|sp|P61615|IDI2_SULSH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|221046552|pdb|2ZRU|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046553|pdb|2ZRU|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046554|pdb|2ZRU|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046555|pdb|2ZRU|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn gi|221046556|pdb|2ZRV|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046557|pdb|2ZRV|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046558|pdb|2ZRV|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046559|pdb|2ZRV|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn. gi|221046560|pdb|2ZRW|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046561|pdb|2ZRW|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046562|pdb|2ZRW|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046563|pdb|2ZRW|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Ipp. gi|221046564|pdb|2ZRX|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046565|pdb|2ZRX|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046566|pdb|2ZRX|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046567|pdb|2ZRX|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Fmn And Dmapp. gi|221046568|pdb|2ZRY|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046569|pdb|2ZRY|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046570|pdb|2ZRY|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046571|pdb|2ZRY|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Ipp. gi|221046572|pdb|2ZRZ|A Chain A, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046573|pdb|2ZRZ|B Chain B, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046574|pdb|2ZRZ|C Chain C, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|221046575|pdb|2ZRZ|D Chain D, Crystal Structure Of Sulfolobus Shibatae Isopentenyl Diphosphate Isomerase In Complex With Reduced Fmn And Dmapp gi|34327946|dbj|BAC82424.1| isopentenyl diphosphate isomerase [Sulfolobus shibatae] Length = 368 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 191/341 (56%), Gaps = 9/341 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK++H+ I ++ + F +D L+H+ P ISF E++ +F K++S P++ Sbjct: 4 IVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVM 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++ MTGG + RIN+ +A AEK + M VGSQRV A +SF +R+ AP + Sbjct: 64 VTGMTGG-RNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALL 178 I+NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + K+ + Sbjct: 123 IANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----D 233 S + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ + Sbjct: 183 SKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAE 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F DWG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK Sbjct: 243 SAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++ +++ + E +M L G+K V L + +I Sbjct: 303 AIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVI 343 >gi|227550898|ref|ZP_03980947.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TX1330] gi|257896531|ref|ZP_05676184.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com12] gi|227179996|gb|EEI60968.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TX1330] gi|257833096|gb|EEV59517.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium Com12] Length = 351 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMVGATNTASLHQQSLIFSG 327 >gi|257893351|ref|ZP_05673004.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,408] gi|257829730|gb|EEV56337.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,408] Length = 351 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFTQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMVGATNTASLHQQSLIFSG 327 >gi|307275318|ref|ZP_07556461.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2134] gi|306507952|gb|EFM77079.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2134] Length = 347 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAVDVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|283782814|ref|YP_003373568.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gardnerella vaginalis 409-05] gi|283441062|gb|ADB13528.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gardnerella vaginalis 409-05] Length = 779 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 181/347 (52%), Gaps = 21/347 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK------KL 55 + +RK HI + K R FD + ALP+++ +E+D SV LG Sbjct: 435 IQNRKDAHIALADKQYK-TRADSDFDKVRFVPNALPQVALEEIDDSVSVLGSEVCDSVHW 493 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYA 114 P+ I++MTGG++ +++N +LA A K VAMA GS D + +F + R Sbjct: 494 CSPIYINAMTGGSD-AAKKVNASLARVAAKNSVAMASGSLSAALRDETLLSTFSVIRSEN 552 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 PH +++N+ A A +AV+++ A+ L +HLN QE++ G+ +F + Sbjct: 553 PHGFVMANVSA-----GTSASDALRAVNMIHANALQVHLNAAQELVMQEGDRDFRNWLCN 607 Query: 175 IALL---SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + A+ VP+++KE GCG+S+ D+ G+R D++GRGGT++ IE+ R Sbjct: 608 IESIVSACEALSVPVIVKETGCGISAKDVHRLKDVGVRTVDVSGRGGTNFVTIENARRNL 667 Query: 232 SDIGIVFQDWGIPTPLSLEMAR--PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 D DWG+ T SL R + ASGG+R +D+++++ LGAS G+A Sbjct: 668 GDCD-YLADWGLTTVESLVDIRKCDSLKNMEVFASGGVRTPLDVVRALALGASAVGVAGE 726 Query: 290 FLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL M + DA+ I++ +K+ V M LLG K V++L T +R Sbjct: 727 FLHTLMHEGEDALSLQIDNWQKQIRVIMALLGCKTVKDLQEKTEFVR 773 >gi|189345860|ref|YP_001942389.1| isopentenyl pyrophosphate isomerase [Chlorobium limicola DSM 245] gi|254803425|sp|B3EFC7|IDI2_CHLL2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|189340007|gb|ACD89410.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium limicola DSM 245] Length = 360 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 117/353 (33%), Positives = 186/353 (52%), Gaps = 19/353 (5%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK +H+ I + G DR FD+ IH ALPEI F ++D S FLG+K+ PL Sbjct: 8 ITIERKHNHVEICLHEAVGFDRKSAGFDEIEFIHNALPEIRFSDIDLSTTFLGRKIGAPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +ISSMTGG K +NR A AAE + + +GS R + +SF +R+YAP Sbjct: 68 MISSMTGGFEKAS-LLNRRFAEAAEHFGIPLGIGSMRQALENSTQKESFAIVRKYAPSVP 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + ++ AD L +HLN QE+ QP GNT+F + +++ L Sbjct: 127 VFANIGAPEVARGLSASDIGILLELIEADALIVHLNAAQELFQPEGNTDFRHVLDQLSHL 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------D 229 + + VP+++KEVGCG+S + + L +G++ D+AG GG SW ++E R Sbjct: 187 CATVPVPVIVKEVGCGISGVCAQRVLDAGVKVIDVAGAGGISWQKVEEIRYVRQRERENR 246 Query: 230 LESDIGIVFQDWGIPTPLSLEMA-----RPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + +WGIPT + + + IASGG+R+G+DI KS+ LGA +G Sbjct: 247 FSPEALDDLLNWGIPTARCIAEVSDLKKHTVHTDFEIIASGGIRSGLDIAKSLALGARIG 306 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A L A + + + IE+ + +FL GT +L +++H+ Sbjct: 307 ASAGQLLNAAHE--ERLEETIETWLNDLRAVLFLTGTTSPDKLQKQHLILKHR 357 >gi|15925336|ref|NP_372870.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|15927926|ref|NP_375459.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus N315] gi|156980661|ref|YP_001442920.1| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu3] gi|255007122|ref|ZP_05145723.2| isopentenyl pyrophosphate isomerase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|54037386|sp|P99172|IDI2_STAAN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54041381|sp|P65102|IDI2_STAAM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|166226209|sp|A7X5W0|IDI2_STAA1 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|13702297|dbj|BAB43438.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus N315] gi|14248120|dbj|BAB58508.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|156722796|dbj|BAF79213.1| isopentenyl diphosphate isomerase [Staphylococcus aureus subsp. aureus Mu3] Length = 349 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ I D FD +H ++P I+ +++D + + +++P+ I+ Sbjct: 7 EQRKNEHVEIAMAQS--DAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + IN LA+ A +T++AMAVGS + ++F + R+ P ++ S Sbjct: 65 AMTGGSE-WTKNINEKLAVVARETRLAMAVGSTHAALRNPRMAETFTIARKMNPEGMIFS 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V+KA +AV +L A L +H+N QE++ P GN F IA + S Sbjct: 124 NVGA-----DVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + + G++Y D++G+GGT++ IE+ R D+ W Sbjct: 179 VSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMD-YLSSW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G T SL Y +E ASGGLR +D +KS+ LGA G++ PFL ++ A Sbjct: 238 GQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAH 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 VA +ES + M +L K + +L + + Sbjct: 298 TVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE 334 >gi|293379310|ref|ZP_06625456.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium PC4.1] gi|292642106|gb|EFF60270.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium PC4.1] Length = 351 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 177/335 (52%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+ + +VD S + G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRVIHNPLPQTAVADVDLSTQAAGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIIAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + + I + +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKALIQEIQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ I G+ DI+GR GTS+ +IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETINDLASLGVHTVDISGRSGTSFIQIENARRSKRELN-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA G + L M + Sbjct: 233 QSTVASLLEANEADTSMEILASGGIRNAYDIFKALCLGAKAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IMLMKQWQEELRLLYTMVGATNTASLHQQSLIFSG 327 >gi|257126423|ref|YP_003164537.1| isopentenyl pyrophosphate isomerase [Leptotrichia buccalis C-1013-b] gi|257050362|gb|ACV39546.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia buccalis C-1013-b] Length = 335 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 14/338 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI + + FDD LIH ++P+ + DE+D S F FP I Sbjct: 1 MKNRKDDHIKYALEH---ESEYNSFDDVELIHSSIPKYNLDEIDLSTHFASHDFEFPFFI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +++TGG+ ++IN+ LA A + + GS + N SF+ +++ P L Sbjct: 58 NAITGGSENA-KKINQKLAKVANECNLLFVTGSYSAALKNSN-DDSFKIVKKENPDLQLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + NY G+ A+ L L +H+N +QE+I P G+ NF + + + Sbjct: 116 TNIG-IDKNYTAGIA----AIKALNPLFLQVHVNLMQELIMPEGSRNFNEWENNLKEFVE 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +++P++LKEVG G++ I+ G+K GI+ FDI+GRGGTS++ IE+ R S + Sbjct: 171 NINIPIILKEVGFGMTEDTIKQGIKLGIKTFDISGRGGTSFAFIENMRRENS--LDYLNN 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T L + Y ++ + IASGG++N +D++K ++LGA G++ L+ + + Sbjct: 229 WGQTTVSCLLNLKNYTDKVEIIASGGVKNPLDMIKCLVLGAKAVGISRTILELVVKYDVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+ +ES + E + M L K +QEL ++ + Sbjct: 289 KVIKIVESWKNECKMIMCALNAKNIQELRNVKYVLYGK 326 >gi|288931869|ref|YP_003435929.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ferroglobus placidus DSM 10642] gi|288894117|gb|ADC65654.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ferroglobus placidus DSM 10642] Length = 354 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 125/340 (36%), Positives = 198/340 (58%), Gaps = 11/340 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +HI I ++ ++ + F+D LIH+ALPE+ +D++ +EFLGKKL+ P++I Sbjct: 3 TKRRKFEHIRICLEE-NVESSYTGFEDVMLIHKALPEVDYDKISLEIEFLGKKLNAPIII 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG+ + +RIN NLA AAE+ K+ + VGSQR D + + ++ +R+ AP+ +I Sbjct: 62 AGMTGGHPE-TKRINENLAAAAEEFKIGIGVGSQRAGIEDDSLVDTYAIVREKAPNAFVI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + GV+ A +AV ++ AD L +HLN LQE +QP G+ + S Sbjct: 121 ANIGISQL-LESGVEYAEKAVEMIDADALAIHLNFLQEAVQPEGDKKAEGAKEALEEACS 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIV 237 + VP++ KE G G+S ++G+ D+ G+GGTSWS +E R D+ ++ + Sbjct: 180 -LKVPIIAKETGAGISREVAFELREAGVSAIDVGGKGGTSWSAVEVFRIKDDVMREVALD 238 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPT + IA+GG+R+G+D+ K++ LGA G+A PFLKPA S Sbjct: 239 FWDWGIPTAFCVAEVHDI---LPTIATGGIRSGIDVAKALALGAEAAGIALPFLKPATIS 295 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V ++ + +MFL G K V++L I + Sbjct: 296 EEEVKRKVKYFVESLKTAMFLTGCKSVKDLRKAPLFITGK 335 >gi|298243367|ref|ZP_06967174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ktedonobacter racemifer DSM 44963] gi|297556421|gb|EFH90285.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ktedonobacter racemifer DSM 44963] Length = 378 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 124/348 (35%), Positives = 197/348 (56%), Gaps = 15/348 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 V RKI+H+NI + + ++D L+H+ALPE+ D VD SVEFLG++L +PL I Sbjct: 5 VKQRKIEHVNIALERDVSAPQQANWNDIRLVHQALPEVDLDAVDTSVEFLGQRLRYPLFI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 SS+TGG+ ++ INRNLA AAE+ +A+ VGSQR + SF + R+ APH LI Sbjct: 65 SSLTGGHPDVL-MINRNLARAAEEYGLALGVGSQRAAIVNPEVSDSFAVTREQAPHAFLI 123 Query: 121 SNLGAVQL-----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 +N+GA QL + F +++ +A ++GA+ L +H+N LQE QP G+ + Sbjct: 124 ANIGAPQLIAQERHAPFTIEQVQRATAMIGANALAIHMNSLQEAAQPEGDRRAFGEVEAL 183 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES--- 232 L +++P++ KE G G++ + G+ D+ G GG+S S +E+ R Sbjct: 184 RKLVPQLELPVIAKETGAGVNREQALILRSCGVSAIDVGGAGGSSMSALEAFRSQSRGDE 243 Query: 233 ---DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 IG +++DWGIPTP+++ I++GG+RNG+D +++ LGASL G+ P Sbjct: 244 QTMRIGALYRDWGIPTPIAVVECGVA--RLPLISTGGVRNGLDAARALSLGASLVGMGFP 301 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 FLK A +AV ++ E V+M L G +Q+L+ ++ + Sbjct: 302 FLKAASQGYEAVCELLQGFIAELKVAMQLSGAASIQQLHEADVVVTGE 349 >gi|32129640|sp|Q8TX99|IDI2_METKA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 365 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 188/342 (54%), Gaps = 9/342 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +H+ + FD ++HRALPE+ FD+VD +E GK+LSFPL+I Sbjct: 1 MRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLII 60 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG+ K E INR LA A + ++ + VGSQR D +FE +R+ P +++ Sbjct: 61 AGMTGGHPKTGE-INRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVL 119 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + G A + V ++ AD L +H+N LQE +Q G + A +A + Sbjct: 120 ANIGLPQLR-ENGPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVDVLAEVCE 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 +DVP++LKE G G+S+ D +L + D+ G GGT+W+ +E+ R E +G Sbjct: 179 TVDVPVVLKETGAGVSAEDAKLVRDI-VDGIDVGGAGGTNWAVVEAVRSKAHGEIPLGYA 237 Query: 238 FQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAM 295 F DWG+PT S+ R N+ I +GG+R G+D+ K + LGA G+A P L K Sbjct: 238 FSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLA 297 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V ++S+ +E ++M + G V+E+ ++ + Sbjct: 298 EGVRGCVRFLKSIAREVKIAMLMAGCSSVEEMSSVPIVVYGK 339 >gi|302348131|ref|YP_003815769.1| isopentenyl pyrophosphate isomerase [Acidilobus saccharovorans 345-15] gi|302328543|gb|ADL18738.1| isopentenyl pyrophosphate isomerase [Acidilobus saccharovorans 345-15] Length = 377 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 127/340 (37%), Positives = 200/340 (58%), Gaps = 8/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++HI+IV K + + ++HR+LPE + +++D SV+ G++L PL+I Sbjct: 4 TSARKLEHIDIVRKGGVEPQETTLLEYVRIVHRSLPEANLEDIDLSVKLCGRELGAPLII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG+ + E IN +A AEK +AM VGSQR D + I +F + R+ APH ++ Sbjct: 64 TGMTGGHPDV-EPINAAIAEVAEKFGIAMGVGSQRAAIEDSSMIHTFSVVRERAPHAFIV 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +GV++A +AV ++ AD + +HLN QE+ Q G+T F+ + K+A L Sbjct: 123 ANLGGAQLAKGYGVKEALKAVEMIRADAIAIHLNIGQELFQDEGDTKFSGVLEKVAELVE 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD------LESDI 234 M VP+++KEVG GLS+ DI G++ FD+AG GGT+W +IE+ R D Sbjct: 183 EMPVPVIVKEVGTGLSAEDISALRSVGVKCFDVAGLGGTNWIKIEALRSKAKHGAPLRDP 242 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + WG PT +++ AR +A I SGGLR+G D+ K+I LGA +GG A+P L+ Sbjct: 243 ASIADLWGNPTAIAIVEARNAAPDAYIIGSGGLRDGHDVAKAIALGADVGGFAAPALRAL 302 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + + +M + G+KR Q+L+L I Sbjct: 303 SAGREGLERYVSQILYQLKAAMLMSGSKRPQDLWLAGITI 342 >gi|73668943|ref|YP_304958.1| isopentenyl pyrophosphate isomerase [Methanosarcina barkeri str. Fusaro] gi|91207072|sp|Q46CL4|IDI2_METBF RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|72396105|gb|AAZ70378.1| isopentenyl-diphosphate delta-isomerase [Methanosarcina barkeri str. Fusaro] Length = 365 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 195/343 (56%), Gaps = 13/343 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+ + + P R F+D LIHRALPE+ D+++ S++FLGK+L P L Sbjct: 5 TSKRKIEHLKLCAESPVESRKVSAGFEDVTLIHRALPELDMDKLNLSIDFLGKRLQAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ +N LA AAE+ + M VGSQR D +SF + R+ AP + Sbjct: 65 IASITGGHPDTT-PVNAALAAAAEELGIGMGVGSQRAAIDDPTQEESFRVVREKAPTAFI 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ +GV + + ++ AD L +HLN LQE IQP G+ + I + Sbjct: 124 YGNVGAAQIR-QYGVDGVEKLIEMIDADALAIHLNFLQEAIQPEGDRDATGCLDMIKEIC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------D 233 S + P+++KE G G+S D L K+G+ D+ G GGTSW+ +E +R +S Sbjct: 183 SVLGKPVIIKETGAGISREDSILLQKAGVSAIDVGGAGGTSWAGVEVYRARKSGDYASEH 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D+GIPT S+ +R IA+GG+R G+DI KSI LGAS A PF+ P Sbjct: 243 LGELFWDFGIPTVASIIESRV---SLPIIATGGIRTGIDIAKSIALGASAASAALPFVGP 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A++ ++VV + + EF ++MFL G +Q+L ++ Sbjct: 300 ALEGKESVVRVLSRMLDEFRIAMFLCGCANIQDLRNAPVVVTG 342 >gi|20094213|ref|NP_614060.1| isopentenyl pyrophosphate isomerase [Methanopyrus kandleri AV19] gi|19887238|gb|AAM01990.1| L-lactate dehydrogenase (FMN-dependent) [Methanopyrus kandleri AV19] Length = 374 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 188/342 (54%), Gaps = 9/342 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK +H+ + FD ++HRALPE+ FD+VD +E GK+LSFPL+I Sbjct: 10 MRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLII 69 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 + MTGG+ K E INR LA A + ++ + VGSQR D +FE +R+ P +++ Sbjct: 70 AGMTGGHPKTGE-INRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVL 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + G A + V ++ AD L +H+N LQE +Q G + A +A + Sbjct: 129 ANIGLPQLR-ENGPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVDVLAEVCE 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIV 237 +DVP++LKE G G+S+ D +L + D+ G GGT+W+ +E+ R E +G Sbjct: 188 TVDVPVVLKETGAGVSAEDAKLVRDI-VDGIDVGGAGGTNWAVVEAVRSKAHGEIPLGYA 246 Query: 238 FQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAM 295 F DWG+PT S+ R N+ I +GG+R G+D+ K + LGA G+A P L K Sbjct: 247 FSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLA 306 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V ++S+ +E ++M + G V+E+ ++ + Sbjct: 307 EGVRGCVRFLKSIAREVKIAMLMAGCSSVEEMSSVPIVVYGK 348 >gi|256960025|ref|ZP_05564196.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Merz96] gi|256950521|gb|EEU67153.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Merz96] Length = 356 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 11 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 69 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 128 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 183 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +D++K + LGA G+A L M + + Sbjct: 242 QSTVISLLESQNWQKKLTILGSGGVRNSLDVVKGLALGAKSMGVAGTILASLMSKNGLEN 301 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 302 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 336 >gi|293556922|ref|ZP_06675483.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1039] gi|291601006|gb|EFF31297.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1039] Length = 354 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 104/335 (31%), Positives = 179/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHISLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|262037194|ref|ZP_06010681.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia goodfellowii F0264] gi|261748793|gb|EEY36145.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia goodfellowii F0264] Length = 335 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 14/336 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K + FDD LIH+++P+ + DE+D S F P I++ Sbjct: 2 NRKDEHIRYALKY---ESPYNSFDDMELIHQSVPKFNIDEIDISTRFASNDFECPFFINA 58 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K + INR LA AE+ + GS + + SF+ +++ +L +N Sbjct: 59 MTGGSEK-GKEINRKLAKVAEECGILFVTGSYSAALKNSD-DNSFKIVKEENKKLLLGTN 116 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA D +A+ L L +H+N +QE+I P G+ NF D I + Sbjct: 117 IGA-----DKDYTAGLKAIEDLKPLFLQIHVNVMQELIMPEGSKNFKDWRKNIEGFVKNI 171 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +PL+LKEVG G+S +++G++SGI+ FDI+GRGGTS++ IE+ R S +WG Sbjct: 172 KIPLILKEVGFGMSEETVKIGMESGIKTFDISGRGGTSFAYIENMRRKNS--LSYLDEWG 229 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAV 301 T SL + Y + + IASGG+RN +DI+KS++LGA G++ L+ A ++ + + Sbjct: 230 QTTVTSLLSVKKYADNIEIIASGGVRNPLDIIKSLVLGAKGVGISGTVLRLAEKNTVEEM 289 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + S ++E + M L + ++EL ++ + Sbjct: 290 IEIVNSWKEECKMIMCALNAQNLEELKKVKYILYGK 325 >gi|257418495|ref|ZP_05595489.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T11] gi|257160323|gb|EEU90283.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T11] Length = 356 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 11 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 69 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 128 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 183 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 242 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 301 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 302 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALVLD 336 >gi|254262302|emb|CAZ90626.1| Isopentenyl-diphosphate delta-isomerase fni [Enterobacter pulveris] Length = 346 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 124/335 (37%), Positives = 184/335 (54%), Gaps = 6/335 (1%) Query: 4 DRKIDHINIVCKD-PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH++IV ++ + W H ALPE+ D V+ GK L P+LIS Sbjct: 7 QRKNDHLDIVLDPLRATNKATTGLERWRFEHCALPELDLDSVNLETMLFGKTLKAPVLIS 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTVLIS 121 SMTGG + + IN++LA AA+ +AM VGSQRV ++ + ELR+ AP L++ Sbjct: 67 SMTGGAQRA-QHINQHLAQAAQTLGLAMGVGSQRVALEAQNDFGLTGELRRVAPDIPLLA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q+ GV A +AV ++ AD L +HLNPLQE +Q G+ ++ + + I A Sbjct: 126 NLGAAQIAGPGGVAYARRAVEMIEADALIIHLNPLQEALQNGGDRDWRGVLAAIRQTVDA 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---ESDIGIVF 238 + VP+++KEVG GLS + + +G+ D+AG GGTSW+ +E R + I + F Sbjct: 186 LGVPVVVKEVGAGLSLPVAKQLIDAGVAMLDVAGAGGTSWAAVEGERAATPRQRAIAMAF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGIPT +L + IASGG+ NG++ K++ LGA L G A+ L A S+ Sbjct: 246 ADWGIPTAQALRDLHDALPDTPLIASGGITNGIEAAKALRLGAHLVGQAAAVLGSANTSA 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AV+ E L ++ V+ F G+ + L + Sbjct: 306 QAVIDHFEVLIEQLRVTCFCTGSADLVALRAAPLI 340 >gi|20089493|ref|NP_615568.1| isopentenyl pyrophosphate isomerase [Methanosarcina acetivorans C2A] gi|24211814|sp|Q8TT35|IDI2_METAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|19914400|gb|AAM04048.1| isopentenyl-diphosphate delta-isomerase [Methanosarcina acetivorans C2A] Length = 365 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 131/343 (38%), Positives = 198/343 (57%), Gaps = 13/343 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RKI+H+ + + P R F+D LIHRALPE++ DE+D +V+FLGK++ P L Sbjct: 5 TSRRKIEHLKLCAESPVEARGVSAGFEDVTLIHRALPELNMDELDLTVDFLGKRMQAPFL 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+S+TGG+ + +N LA AAE+ V + VGSQR D SF + R AP+ + Sbjct: 65 IASITGGHPDTL-PVNAALAAAAEELGVGIGVGSQRAAIDDPAQEDSFRVVRDKAPNAFV 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA Q+ +GV+ + + ++ AD L +HLN LQE IQP G+ + IA + Sbjct: 124 YGNVGAAQIR-QYGVEGVEKLIEMIDADALAIHLNFLQEAIQPEGDRDATGCLDMIAEIC 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------D 233 S + +P++ KE G G+S D L K+G+ D+ G GGTSW+ +E +R ES Sbjct: 183 SMVRIPVIAKETGAGISREDALLLHKAGVSAIDVGGVGGTSWAGVEVYRAKESKDPVSER 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +G +F D+GIPT SL +R IA+GG+R G+DI KSI LGAS A PF+ P Sbjct: 243 LGELFWDFGIPTVASLIESRV---SLPLIATGGVRTGLDIAKSIALGASAASAALPFVGP 299 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ ++VV + + EF +MFL G +Q L+ + ++ Sbjct: 300 SLEGKESVVKVLSCMLDEFRAAMFLCGCANIQALHNSPVVVTG 342 >gi|189499393|ref|YP_001958863.1| isopentenyl pyrophosphate isomerase [Chlorobium phaeobacteroides BS1] gi|189494834|gb|ACE03382.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeobacteroides BS1] Length = 357 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 115/353 (32%), Positives = 180/353 (50%), Gaps = 20/353 (5%) Query: 1 MVNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ K D F+ + H A PEI+ ++D + FLG ++S+P Sbjct: 7 ITVNRKQSHVETCLKRNVCFDTKTTGFERYEFTHNAAPEINHSDIDLATSFLGHRISYPF 66 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG + E +NR LA AEK + + VGS R + + +SF + RQ AP Sbjct: 67 MISSMTGGYEQA-ENLNRILAQTAEKLGIPLGVGSMRQALENASFRESFSVVRQSAPSVP 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+GA ++ ++ + ++ AD L +HLNP QE+ QP GNT F + +++ + Sbjct: 126 VLANIGAPEIAQGLTKKELDTLIDIVRADALIVHLNPAQELFQPEGNTRFKNFLTQLKKI 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------D 229 + + VP+++KEVGCG+S + ++ G+ DIAG GG SW ++E R Sbjct: 186 TETLKVPVIVKEVGCGISPETAKNLVEKGVTIIDIAGAGGISWQKVEEERYLQQFQHENR 245 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASL 283 +WGIPT SL + Q IASGG+ NGVDI K+I LGA L Sbjct: 246 FSPSALEELLNWGIPTARSLTGVAALKSNNTHYRHIQIIASGGISNGVDIAKAIALGADL 305 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A LK + + I + + MFL GTK +++L + ++ Sbjct: 306 CASAGQMLKALHE--QRLEETILTWMNDLKAVMFLTGTKDIRQLQQTSISLKQ 356 >gi|255971351|ref|ZP_05421937.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T1] gi|255973970|ref|ZP_05424556.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T2] gi|256617769|ref|ZP_05474615.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ATCC 4200] gi|256957242|ref|ZP_05561413.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis DS5] gi|256964280|ref|ZP_05568451.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis HIP11704] gi|257077784|ref|ZP_05572145.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis JH1] gi|257081144|ref|ZP_05575505.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis E1Sol] gi|257086238|ref|ZP_05580599.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis D6] gi|257089311|ref|ZP_05583672.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis CH188] gi|257415463|ref|ZP_05592457.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis AR01/DG] gi|255962369|gb|EET94845.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T1] gi|255966842|gb|EET97464.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T2] gi|256597296|gb|EEU16472.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ATCC 4200] gi|256947738|gb|EEU64370.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis DS5] gi|256954776|gb|EEU71408.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis HIP11704] gi|256985814|gb|EEU73116.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis JH1] gi|256989174|gb|EEU76476.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis E1Sol] gi|256994268|gb|EEU81570.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis D6] gi|256998123|gb|EEU84643.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis CH188] gi|257157291|gb|EEU87251.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis ARO1/DG] Length = 356 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 11 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 69 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 128 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 183 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 242 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 301 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 302 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 336 >gi|327311478|ref|YP_004338375.1| isopentenyl pyrophosphate isomerase [Thermoproteus uzoniensis 768-20] gi|326947957|gb|AEA13063.1| isopentenyl pyrophosphate isomerase [Thermoproteus uzoniensis 768-20] Length = 352 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 132/342 (38%), Positives = 190/342 (55%), Gaps = 15/342 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DHI + P + D+ L+HRALPE+ D+VD FLG+++S P + Sbjct: 1 MIDKRKNDHIFLA-ASPESQIGDSWLDEVVLVHRALPELDLDDVDTRTTFLGREISMPFI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I +MTGG + E+IN LA AAE+ V M VGSQRV A +SFE+ + AP Sbjct: 60 IGAMTGGTE-LAEKINARLAKAAEELGVPMYVGSQRVGIVKPEARRSFEVVKANAPTVPK 118 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 I+NLGA Q L D ++ A +AV+++ A L +HLNP QE+ QP G F ++ ++ Sbjct: 119 IANLGAPQISRLPDDQLLRWAEEAVNMIDAAALAVHLNPAQEVFQPEGEPYFKNVLDRLR 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---- 232 L ++ VPL++KEVG G+S + L D+AG GGTS+ IE R E+ Sbjct: 179 FLKRSLRVPLIVKEVGNGISKE-VAGLLNGVADIIDVAGAGGTSFVVIEGLRAKEARPEL 237 Query: 233 -DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ F+ WGIPT + + IASGG+RNG+D K++ LGA + P L Sbjct: 238 YELAQEFKGWGIPTAAA-ICEAKAAFKGPVIASGGIRNGLDGAKALGLGADYFSASQPLL 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K A+D D V AI + KE ++MFL G +VQ+L + Sbjct: 297 KAALD--DKVAQAISRMLKELRIAMFLTGAAKVQDLRKAPKV 336 >gi|294617087|ref|ZP_06696754.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1679] gi|291596645|gb|EFF27871.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1679] Length = 354 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 179/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|257885790|ref|ZP_05665443.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,501] gi|257821646|gb|EEV48776.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,501] Length = 354 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 179/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|20803891|emb|CAD31469.1| PROBABLE OXIDOREDUCTASE PROTEIN DEHYDROGENASE [Mesorhizobium loti R7A] Length = 373 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 132/336 (39%), Positives = 195/336 (58%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH++IV ++ H ALPE+ ++D LGK + PLLI Sbjct: 31 SRRKDDHLDIVLDRRTAPATVAAGWEYIRFEHCALPELDLTQIDLRASLLGKTMRAPLLI 90 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E INR+L+ AA+ +AM VGSQRV N+ + LR+ AP L+ Sbjct: 91 SSMTGGVPRA-EAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRMAPDIPLL 149 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA QL G+ A +AV L ADGL +HLN LQE +QP G+ ++ + ++IA +S Sbjct: 150 ANIGAAQLREADGLDLARRAVDALEADGLIVHLNALQEAVQPEGDRDWRGVLAQIARAAS 209 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIV 237 ++DVP++ KEVG GLS+ +K+G+ D+AG GGTSW+ +E + + + Sbjct: 210 SVDVPIVAKEVGSGLSASVACALVKAGVAVIDVAGAGGTSWAAVEGERARDAADRAVAMA 269 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A S Sbjct: 270 FADWGIPTPASVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAATVS 329 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++AVVA E + ++ V+ F G+ + L L Sbjct: 330 TEAVVAHFEIVIRQLAVACFCTGSADLAALRQARLL 365 >gi|293383779|ref|ZP_06629686.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis R712] gi|293388745|ref|ZP_06633238.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis S613] gi|312907005|ref|ZP_07766001.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 512] gi|312978737|ref|ZP_07790464.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 516] gi|291078855|gb|EFE16219.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis R712] gi|291081902|gb|EFE18865.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis S613] gi|310626990|gb|EFQ10273.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 512] gi|311288444|gb|EFQ67000.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis DAPTO 516] Length = 347 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +D++K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDVVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|261402404|ref|YP_003246628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus vulcanius M7] gi|261369397|gb|ACX72146.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus vulcanius M7] Length = 359 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 190/343 (55%), Gaps = 10/343 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++HI + ++ L+HR ++F++++ ++ GK+LS P+++ Sbjct: 11 IEIRKLEHIFLCSYCDVEYDKTTLLENVELVHRGTCGVNFNDIETEIKLFGKRLSAPIIV 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S MTGG++K E IN+N+A A E+ + M VGSQR + + I+++ + + ++I Sbjct: 71 SGMTGGHSKAKE-INKNIAKAVEELGLGMGVGSQRAAIVNEDLIETYSIVRDYTSNLVIG 129 Query: 122 NLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL-- 178 NLGAV D + + +AV ++ AD + +H NPLQEIIQP G+ NF ++ ++ Sbjct: 130 NLGAVNFIVDKWDEEIVDRAVEMIDADAMAIHFNPLQEIIQPEGDLNFKNMVKIKNVITN 189 Query: 179 --SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--- 233 ++P + K+VG G S D + + G DI G GGTSW+++E +R +++ Sbjct: 190 YKRKYKNIPFIAKQVGEGFSREDALILKEIGFDAIDIQGSGGTSWAKVEIYRVKDANTKK 249 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + F DWGIPT S+ + + I SGG+R+G+DI K I +G +A P LK Sbjct: 250 LLKKFSDWGIPTAASIFEVKSVYDRV-VIGSGGIRSGLDIAKCIAIGCDCCSVALPILKA 308 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ + VV +E+ KE ++MFL+G + + EL +I+ Sbjct: 309 SLKGWEEVVNVLENYIKELKIAMFLVGAENIIELKKTPYIIKG 351 >gi|227828316|ref|YP_002830096.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.14.25] gi|227831074|ref|YP_002832854.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus L.S.2.15] gi|229579955|ref|YP_002838354.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus Y.G.57.14] gi|229581384|ref|YP_002839783.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus Y.N.15.51] gi|238620508|ref|YP_002915334.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.16.4] gi|284998570|ref|YP_003420338.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.D.8.5] gi|259491449|sp|C4KJA2|IDI2_SULIK RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491450|sp|C3MJQ6|IDI2_SULIL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491451|sp|C3MZ14|IDI2_SULIM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491452|sp|C3NMP1|IDI2_SULIN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|259491453|sp|C3N8S7|IDI2_SULIY RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|227457522|gb|ACP36209.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.S.2.15] gi|227460112|gb|ACP38798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.14.25] gi|228010670|gb|ACP46432.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus Y.G.57.14] gi|228012100|gb|ACP47861.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus Y.N.15.51] gi|238381578|gb|ACR42666.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.16.4] gi|284446466|gb|ADB87968.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus L.D.8.5] gi|323475386|gb|ADX85992.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus REY15A] gi|323478111|gb|ADX83349.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus HVE10/4] Length = 368 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 190/341 (55%), Gaps = 9/341 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK++H+ I ++ + F +D L+H+ P ISF E++ +F K++S P++ Sbjct: 4 IVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIM 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++ MTGG + RIN+ +A EK + M VGSQRV A +SF +R+ AP + Sbjct: 64 VTGMTGG-RNELGRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALL 178 I+NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + K+ + Sbjct: 123 IANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----D 233 S + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ + Sbjct: 183 SKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAE 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F DWG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK Sbjct: 243 SAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++ +++ + E +M L G+K V L + +I Sbjct: 303 AIEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVI 343 >gi|42523129|ref|NP_968509.1| isopentenyl pyrophosphate isomerase [Bdellovibrio bacteriovorus HD100] gi|81617563|sp|Q6MMK2|IDI2_BDEBA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|39575334|emb|CAE79502.1| Isopentenyl-diphosphate delta-isomerase [Bdellovibrio bacteriovorus HD100] Length = 347 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 11/340 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL----GKKLSFP 58 RK DHI I + D LIH ALP+++F EVD S F LS P Sbjct: 9 EKRKRDHIRIALDPRSQTDGQNGLDSITLIHEALPDLNFKEVDISTSFFFSGESIPLSSP 68 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHT 117 + ISSMT G+ K E IN LA +++ ++ M VGSQR D NA + + +R+ AP Sbjct: 69 IFISSMTAGHEKGRE-INEALARLSDRRQILMGVGSQRRELEDSNAAEEWARVRKQAPKA 127 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 L+ N+G QL + K + + A LF+HLNPLQE +QP G T+F + + I Sbjct: 128 RLLGNIGIAQL-IKSPIDKIRRLIDSTEAVALFVHLNPLQEALQPEGTTDFKNGLAAIEN 186 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI--- 234 L VP+++KE GCG S ++ +GI D++G+GGT W R+E +R ESD+ Sbjct: 187 LVKLAGVPVIVKETGCGFSVDTLKRLSSTGIYGVDVSGKGGTHWGRVEGYRSEESDMLYH 246 Query: 235 -GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F +WGI T S+ A E Q ASGG+RNG++I K + LGAS G+A PFL+ Sbjct: 247 VAQTFANWGISTKQSMLNAIDARVEYQLWASGGVRNGLEIGKLMALGASKVGVAKPFLEA 306 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ +A+ + L E V+MF G++ +++L + Sbjct: 307 ALQGDEALEKLLTQLETELKVTMFCTGSRNLKDLQSKKVI 346 >gi|260558441|ref|ZP_05830637.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium C68] gi|260075615|gb|EEW63921.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium C68] Length = 354 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMKHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ ++ + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQHSLIFSG 327 >gi|261207163|ref|ZP_05921852.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TC 6] gi|289565284|ref|ZP_06445735.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium D344SRF] gi|294615075|ref|ZP_06694961.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1636] gi|260078791|gb|EEW66493.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium TC 6] gi|289162940|gb|EFD10789.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium D344SRF] gi|291592017|gb|EFF23640.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1636] Length = 354 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS D + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKDPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAQEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLASLGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ ++ + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQHSLIFSG 327 >gi|315145812|gb|EFT89828.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2141] gi|315163040|gb|EFU07057.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0645] Length = 347 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ + FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFH--KKKSNDFDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALVLD 327 >gi|29375485|ref|NP_814639.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis V583] gi|81585436|sp|Q837E2|IDI2_ENTFA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|29342945|gb|AAO80709.1| isopentenyl diphosphate delta isomerase, putative [Enterococcus faecalis V583] gi|295113907|emb|CBL32544.1| isopentenyl-diphosphate delta-isomerase [Enterococcus sp. 7L76] gi|315167964|gb|EFU11981.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1341] gi|315574186|gb|EFU86377.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0309B] gi|315581671|gb|EFU93862.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0309A] Length = 347 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALVLD 327 >gi|229546745|ref|ZP_04435470.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX1322] gi|229548837|ref|ZP_04437562.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis ATCC 29200] gi|256854255|ref|ZP_05559619.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T8] gi|257421145|ref|ZP_05598135.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis X98] gi|294781311|ref|ZP_06746657.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis PC1.1] gi|307267976|ref|ZP_07549364.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4248] gi|307271900|ref|ZP_07553168.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0855] gi|307278404|ref|ZP_07559479.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0860] gi|312901557|ref|ZP_07760830.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0470] gi|312904460|ref|ZP_07763619.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0635] gi|312952832|ref|ZP_07771694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0102] gi|229306066|gb|EEN72062.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis ATCC 29200] gi|229308094|gb|EEN74081.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX1322] gi|256709815|gb|EEU24859.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis T8] gi|257162969|gb|EEU92929.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis X98] gi|294451647|gb|EFG20103.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis PC1.1] gi|306504910|gb|EFM74105.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0860] gi|306511406|gb|EFM80408.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0855] gi|306515617|gb|EFM84144.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4248] gi|310629348|gb|EFQ12631.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0102] gi|310632158|gb|EFQ15441.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0635] gi|311291352|gb|EFQ69908.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0470] gi|315027086|gb|EFT39018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX2137] gi|315029770|gb|EFT41702.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4000] gi|315032470|gb|EFT44402.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0017] gi|315034296|gb|EFT46228.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0027] gi|315148058|gb|EFT92074.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX4244] gi|315149660|gb|EFT93676.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0012] gi|315155204|gb|EFT99220.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0043] gi|315157532|gb|EFU01549.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0312] gi|315165239|gb|EFU09256.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1302] gi|315172003|gb|EFU16020.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1342] gi|315174856|gb|EFU18873.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1346] gi|315577317|gb|EFU89508.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0630] gi|327534481|gb|AEA93315.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis OG1RF] gi|329577892|gb|EGG59313.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX1467] Length = 347 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|94985481|ref|YP_604845.1| isopentenyl pyrophosphate isomerase [Deinococcus geothermalis DSM 11300] gi|94555762|gb|ABF45676.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Deinococcus geothermalis DSM 11300] Length = 346 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 122/331 (36%), Positives = 187/331 (56%), Gaps = 2/331 (0%) Query: 5 RKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK+ H+ + + +RALPE+ + VD + FLG++L P+LI + Sbjct: 17 RKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLTTTFLGRRLRAPVLIGA 76 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + E INRNLA AAE+ + M +GSQRVM A SF +R AP +L+ NL Sbjct: 77 MTGGAQRA-EVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSFRVRDVAPGVLLLGNL 135 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA Q +GV +A +AV + ADGL +HLNPLQE +Q G+T + L++++A + A+ Sbjct: 136 GAAQFLLGYGVAEAERAVRAVEADGLAIHLNPLQEAMQAGGDTRWRGLAARLAEVVPALP 195 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P++LKEVG GL ++ +G D+AG GGTSW+R+E + + + G+ Sbjct: 196 FPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLVRYGAVLAPDLCEVGL 255 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 PT ++ AR IASGG+R G+D +++ LGA + +A P L PA++S+ AV A Sbjct: 256 PTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVARPLLAPALESAAAVEA 315 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + E V++F+ G + V+ + L+ Sbjct: 316 WLARFIHELRVALFVGGFRSVEAVRGRLELV 346 >gi|307290917|ref|ZP_07570807.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0411] gi|306497987|gb|EFM67514.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0411] Length = 347 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 101/335 (30%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T LSL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVLSLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|227555012|ref|ZP_03985059.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis HH22] gi|227175838|gb|EEI56810.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis HH22] Length = 347 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 186/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++ +GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSCQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALVLD 327 >gi|331701428|ref|YP_004398387.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus buchneri NRRL B-30929] gi|329128771|gb|AEB73324.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus buchneri NRRL B-30929] Length = 344 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 180/342 (52%), Gaps = 15/342 (4%) Query: 1 MVND---RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M + RK +H+++ + F ++ +LP+ D++D + + L+ Sbjct: 1 MTSQHSHRKDEHVSLA--EKFYQPVDNSFAGVRFVNASLPKYRLDDIDLTTQLGSLSLTT 58 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPH 116 P I +M+GG+ + + INR LA+ A+ +AMAVGSQ V SD SF +RQ P+ Sbjct: 59 PFYIEAMSGGSPR-TKEINRRLAVVAKACGLAMAVGSQSVGLSDPEVRDSFSIVRQTNPN 117 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 ++++N+GA + V+ A +AV ++ AD L LH+N QE++ P G+ F I Sbjct: 118 GIVLANIGA-----NHSVEDAQKAVEMIAADALELHINVAQELVMPEGDRGFH-FIDNIQ 171 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + + VP+++KEVG G+S I + G++Y ++ G GGT+++ IE+ R D+ Sbjct: 172 AIIANVGVPVIVKEVGFGMSQATISQLVDLGVKYVNVGGHGGTNFAAIENFRRSSKDMA- 230 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 DWG+ T SL AR + + IA+GG+++ +D+ K + LGAS G+A +L + Sbjct: 231 YLTDWGLSTVESLFEARAFSDRLGIIAAGGVKSPLDVAKCLTLGASAVGVAGYWLHEIIH 290 Query: 297 SSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 SD ++ + + M +L + V +L ++ Q Sbjct: 291 KSDNEIIDDVREWQYGLKTIMLMLNCRTVADLQRQRLILDPQ 332 >gi|229585546|ref|YP_002844048.1| isopentenyl pyrophosphate isomerase [Sulfolobus islandicus M.16.27] gi|259491448|sp|C3N063|IDI2_SULIA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|228020596|gb|ACP56003.1| isopentenyl-diphosphate delta-isomerase, type 2 [Sulfolobus islandicus M.16.27] Length = 368 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 114/341 (33%), Positives = 190/341 (55%), Gaps = 9/341 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK++H+ I ++ + F +D L+H+ P ISF E++ +F K++S P++ Sbjct: 4 IVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIM 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++ MTGG + RIN+ +A EK + M VGSQRV A +SF +R+ AP + Sbjct: 64 VTGMTGG-RNELGRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALL 178 I+NLG QL +G+++ A+ ++ AD + +HLNP QE+ QP G + K+ + Sbjct: 123 IANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES-----D 233 S + VP+++KE G G+S +L GI+ FD +G+GGT+W IE RD+ + Sbjct: 183 SKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAE 242 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 F +WG+PT S+ R ++ + SGG+R+G+D K+I LGA + G+A P LK Sbjct: 243 SAKNFLNWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A++ +++ + E +M L G+K V L + +I Sbjct: 303 AIEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVI 343 >gi|52549018|gb|AAU82867.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon GZfos21B5] Length = 371 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 17/350 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RKI+ + I + ++ F D L+H ALPE+ + +D EFLG +P++I Sbjct: 4 TSRRKIEQLQICTEKE-VEVEANCFADVKLVHVALPELDKEAIDLKTEFLGFSFQYPIMI 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +SMTGG+ ++N LA AAE + M VGSQR F SF + R AP+ + Sbjct: 63 ASMTGGHPD-TRKVNIVLAEAAETLGIGMGVGSQRAAFEGTELEASFRVVRDVAPNLFIY 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QL ++GV+ + + ++GAD + +HLN LQE IQP GN + + + I + Sbjct: 122 ANLGAPQLK-EYGVEGVERVIEMIGADAIAIHLNFLQEAIQPEGNVDASGCLAAITEVCE 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 A+ P+++KE G G+S ++ SG+ D+ G GGTS + E +R +L + Sbjct: 181 AIKKPVIVKETGAGISYTMAKMLHGSGVSAIDVGGLGGTSLAAAEIYRANAEGDELGEHL 240 Query: 235 GIVF-QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 G +F +WGI T S+ IA+GG+RNG+DI K I LG+ + A PFLKP Sbjct: 241 GKLFGWNWGISTVESIVECSALPFTIPIIATGGIRNGLDIAKGIALGSDMCSAALPFLKP 300 Query: 294 AMDSS------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AM+S D V+A I +E V+MFL G K + +L +I + Sbjct: 301 AMESGSIKSSVDKVIAKITEFSEELKVAMFLTGCKNMIDLKAAELVITGE 350 >gi|257083813|ref|ZP_05578174.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Fly1] gi|256991843|gb|EEU79145.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecalis Fly1] Length = 356 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 11 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 69 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 128 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIIQAV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 183 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 242 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 301 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 302 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 336 >gi|124027424|ref|YP_001012744.1| isopentenyl pyrophosphate isomerase [Hyperthermus butylicus DSM 5456] gi|123978118|gb|ABM80399.1| Isopentenyl-diphosphate delta-isomerase [Hyperthermus butylicus DSM 5456] Length = 383 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 188/349 (53%), Gaps = 14/349 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK+DHI I K + L+HRALPE + +D S+EFLGK+LS PL+ Sbjct: 3 TKTRKLDHIRITVDSDVEHPGKITLLEHVELVHRALPETALSSIDTSIEFLGKQLSMPLM 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-----RQYAP 115 ++ MTGG+ + RIN +A AA + +A+ VGSQR D + +F + R+ Sbjct: 63 VTGMTGGHP-VAARINCVIARAAARLGIAIGVGSQRAAIEDPSLEYTFRVARDCAREEGG 121 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 VL++NLGA QL +GV+ +A+ ++ AD + +H+N QE QP G+ +F + + Sbjct: 122 DVVLVANLGAAQLVAGYGVEHVRRAIEMIDADAVAIHVNAAQEAFQPEGDVDFRNAIDLV 181 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------D 229 A ++ +D P+++KE G GL + + GIR+FD++G GGTSW R+E R Sbjct: 182 AEVARELDKPVIVKETGHGLGYEVVYVLRGRGIRFFDVSGAGGTSWVRVEYFRARIRGLQ 241 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 ++ F WGIPT ++ R ++ IASGG+R G+D K+I LGA + GLA P Sbjct: 242 GLAEAAKTFSSWGIPTAQAVVETRWAAPDSCIIASGGVRTGLDAAKAIALGADIAGLALP 301 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ D V+ +E + EF ++FL G + E ++ + Sbjct: 302 VIRAYTVGDLDGVIGLLERIGMEFKAALFLTGASSLAEARRLPLIVSPE 350 >gi|260890238|ref|ZP_05901501.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia hofstadii F0254] gi|260859858|gb|EEX74358.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leptotrichia hofstadii F0254] Length = 335 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 185/338 (54%), Gaps = 14/338 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI + + + FDD LIH ++P+ + DE+D S F FP I Sbjct: 1 MKNRKDDHIKYALEH---ESDYNSFDDVELIHSSIPKYNLDEIDLSTHFASHDFEFPFFI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +++TGG+ ++IN+ LA A + + GS + +A SF +++ P++ L Sbjct: 58 NAITGGSENA-KKINQKLAKVANECNLLFVTGSYSAALKN-SADDSFNIVKKENPYSQLA 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G + NY G+ A+ L L +H+N +QE+I P G+ NF + + + Sbjct: 116 TNIG-IDKNYTAGIA----AIKALNPLFLQVHVNLMQELIMPEGSRNFNEWENNLKEFVQ 170 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +++P++LKEVG G++ I+ G+K GI+ FDI+GRGGTS++ IE+ R S + Sbjct: 171 NIEIPIILKEVGFGMTENTIKQGIKLGIKTFDISGRGGTSFAFIENMRRENS--LDYLNN 228 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG T L + Y ++A+ IASGG+RN +D++K ++LGA GL+ L+ A+ + Sbjct: 229 WGQTTVSCLLNLKDYTDKAEIIASGGVRNPLDMIKCLVLGAKAVGLSRTILELAVKYDVE 288 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ +E+ + E + M L K ++EL ++ + Sbjct: 289 NIIKIVENWKIECKMIMCALNAKNIKELQNTKYVLYGK 326 >gi|297584435|ref|YP_003700215.1| isopentenyl-diphosphate delta-isomerase [Bacillus selenitireducens MLS10] gi|297142892|gb|ADH99649.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus selenitireducens MLS10] Length = 352 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RKIDHI DD +H ALP ++ D++ S P+ I+ Sbjct: 4 SKRKIDHIEHALS--MESPRLSSMDDIAFVHNALPGLNVDDISLESSIGELNFSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG K E+INR LA A + MAVGSQ D +S+++ RQY P ++ + Sbjct: 62 AMTGGGGKETEKINRQLAQVANVFNIPMAVGSQMAAIRDRKEQQSYKVVRQYHPRGLVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G+ + V +A V +L AD + +HLN +QE++ P G+ F +I++++ Sbjct: 122 NVGS-----EATVDQAKFCVDLLEADAIQIHLNVIQELVMPEGDRAFRGALERISMIAEE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+S ++ K+G+ D+ GRGGT++S IE+ R F++W Sbjct: 177 LNVPVIVKEVGFGISLEAAKMLSKAGVAAIDVGGRGGTNFSWIENQRRDTP--YDFFENW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 GIPT ++ + + +++GG++ +D+ KS+ LGA+ G+A LK D D Sbjct: 235 GIPTAAAIVESSSVAGKLPVLSTGGIQTSMDVAKSVALGANAAGMAGQVLKWLRTDGLDK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + ++ L E M LG + V +L +I + Sbjct: 295 TIQHMDQLMIELKTIMTALGAQSVHDLQSVPLVISGE 331 >gi|229084600|ref|ZP_04216870.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-44] gi|228698750|gb|EEL51465.1| Isopentenyl-diphosphate delta-isomerase [Bacillus cereus Rock3-44] Length = 349 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK+DHI F D +H++LP S++ V + LS P+ I+ Sbjct: 4 AKRKLDHIEYALSTG--QSRIHGFHDIAFVHQSLPNSSYENVTCETQIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + IN LA AA+ +AMAVGSQ D S+ +R+ + ++ + Sbjct: 62 AMTGGGGEQTLYINEQLAYAAKHHNLAMAVGSQMAALKDEREANSYRIVRKVNQNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + + Sbjct: 122 NLGS-----EASVEQAKRAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLERIEKIVLS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +VP+++KEVG G+S ++ G+ D+ G+GGT+++ +E+ R + F DW Sbjct: 177 AEVPIIVKEVGFGMSKETVQQLADVGVTAVDVGGQGGTNFAAVENERR--QRMLSYFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T S+ A N IASGG++ +D+ K+I LGA A FL+ + D + Sbjct: 235 GIQTVASIIEASSTNNNLSLIASGGIQTALDVAKAIALGAQTTAFAGYFLRILITDGIEK 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ IE L + M LG + EL +++ Sbjct: 295 LIDEIELLHTDLQFIMTALGASTLSELQQVPLIVKG 330 >gi|315641785|ref|ZP_07896789.1| isopentenyl diphosphate isomerase [Enterococcus italicus DSM 15952] gi|315482460|gb|EFU72999.1| isopentenyl diphosphate isomerase [Enterococcus italicus DSM 15952] Length = 348 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 174/331 (52%), Gaps = 11/331 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ FD HLIHR+ P+++ D++ + E L P I++ Sbjct: 2 NRKDEHVSLAKAFH--KDRPSDFDHVHLIHRSFPQVAVDDISITSEMASLPLKTPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K ++IN LA A +T +AMA GS + D + SF +R+ P ++++N Sbjct: 60 MTGGSEK-TKQINEQLATLARETSLAMATGSVSIALKDPSVQDSFTIVRKTNPTGMILAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA +++A +A+ +L A+ L +H+N QE++ P G+ +F IA ++S + Sbjct: 119 VGA-----GSSLEQAQRAIDLLEANALQIHVNAPQELVMPEGDRDFRYWLEDIAKIASTL 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+++KEVG G++ I+ + GI D++G+GGTS+++IE+ R + G +G Sbjct: 174 SIPVIVKEVGFGMTRETIQQLIDCGITSIDVSGQGGTSFTQIENARRKNREFG-YLDSYG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAV 301 + T SL A +FIASGG+R DI K++ LGA+ G++ L D Sbjct: 233 LSTVQSLLEANEVPYPYEFIASGGIRQAYDIFKALALGANAVGISGTILTHLLTKGLDET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + ++ + E + G+K + Sbjct: 293 ILLVQQWQSELTTLYAMTGSKTTAQTRTVPL 323 >gi|323480081|gb|ADX79520.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis 62] Length = 347 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 101/335 (30%), Positives = 188/335 (56%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD H +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVHFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|226355825|ref|YP_002785565.1| isopentenyl pyrophosphate isomerase [Deinococcus deserti VCD115] gi|226317815|gb|ACO45811.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (Isopentenylpyrophosphate isomerase) [Deinococcus deserti VCD115] Length = 340 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 125/327 (38%), Positives = 192/327 (58%), Gaps = 2/327 (0%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK+ HI D + +RALPE++ +V+ V FLG++LS PLL Sbjct: 10 LSARKLRHIEACLLPDSQYQGVTTGLETVRWPYRALPELNLADVNLEVSFLGRRLSAPLL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ++ +INRNLA AA++ + + +GSQRVM +F++R+ APH +L+ Sbjct: 70 IGAMTGGADRA-GQINRNLATAAQRLGIGLMLGSQRVMLERPEVAATFQVREVAPHVLLV 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG Q +G ++A QAV +GAD L +H+NPLQE +Q G+T++A L++++A L Sbjct: 129 GNLGGAQFLLGYGAEQAVQAVRQVGADALAIHVNPLQEALQAGGDTSWAGLATQLAALVP 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ P++LKEVG GL + + G R D+AG GGTSW+R+E + + Sbjct: 189 SLPFPVILKEVGHGLDARTVSTVAGMGFRALDVAGAGGTSWARVEELVRYGAVQRPDLCE 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L AR IASGG+R G+D ++++LGA + +A P L+PAMDS++A Sbjct: 249 IGVPTAQALRDARQQAPGVSLIASGGIRTGLDAARALLLGAQVVAVARPLLEPAMDSAEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + E VSMF+ G + L Sbjct: 309 VEVWLSRFIHELRVSMFVGGFADISSL 335 >gi|153799374|gb|ABS50445.1| NapT3 [Streptomyces aculeolatus] Length = 380 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DH+ + + FD+ +H AL I +V + F G PL Sbjct: 1 MSGQRKDDHVRLAMEQHRARSGINQFDEVSFVHHALAGIDRPDVSLATAFAGIHWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K E INRNLA AA + V +A GS D + +F + R + P + Sbjct: 61 INAMTGGSVKTGE-INRNLATAAREAGVPIASGSMNAYLKDPSCADTFRVLRTHNPRGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V A +A+ +L AD L +H+N QE P G+ +FA +I ++ Sbjct: 120 MANINATT-----TVDGAQRAIDLLQADALQIHINTAQETPMPEGDRSFASWGPQIHKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GLS + G+ D++GRGGT ++RIE+ R +D Sbjct: 175 AAVDIPVIVKEVGNGLSRQSVHTLAALGVTAADVSGRGGTDFARIENGRREHADYAF-LT 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG T L A+ +ASGG+R +D+ +++ LGA G + FL+ D Sbjct: 234 GWGQSTAACLLDAQDAT--IPLLASGGVRTPLDVARALALGAVAVGSSGGFLRTLTDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+V + + + +LG +L LI Q Sbjct: 292 GALVTQLTTWLDQLAALQTMLGAPTPADLTRCDLLIHGQ 330 >gi|54024179|ref|YP_118421.1| isopentenyl pyrophosphate isomerase [Nocardia farcinica IFM 10152] gi|81823130|sp|Q5YXN4|IDI2_NOCFA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|54015687|dbj|BAD57057.1| putative isopentenyldiphosphate isomerase [Nocardia farcinica IFM 10152] Length = 362 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 10/339 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M ++RK DH+ FD H AL I +VD V+ GK+ PL Sbjct: 1 MSSNRKDDHVRHAVDQHRDRTPVNDFDAIGFQHHALAGIDAADVDLGVDIAGKRWHTPLF 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + INR LAIAA +T + +A GS F D SF + R+ PH V+ Sbjct: 61 INAMTGGSAAATD-INRGLAIAARETGLPVASGSLSAYFRDPGLAGSFRVLREENPHGVV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+N+ A + +A +AV +L AD L +HLN +QEI+ P G+ +F +I L+ Sbjct: 120 IANVNATA-----TLDQARRAVDLLAADALQIHLNAVQEIVMPEGDRSFRSWPRRIEHLA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + + VP+++KEVG GLS + +G+ D+ GRGGT+++RIE+ R +D Sbjct: 175 AGVPVPVIVKEVGFGLSRPTVAWLRDAGVAVADVGGRGGTNFARIENDRRPAADFSF-LD 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 WG TP L + +ASGG+R+ +D+ K++ LGA G+A FL +D + Sbjct: 234 TWGQSTPACLLDSAEV-TGIALVASGGIRSPLDVAKALALGADATGVAGRFLATLLDRGA 292 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + ++ I + + +LG +L LI + Sbjct: 293 EGLIETIRAWLDQLRSIATVLGAATPADLRRCDLLITGE 331 >gi|307286708|ref|ZP_07566794.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0109] gi|306502186|gb|EFM71470.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0109] Length = 347 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKITSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|305662642|ref|YP_003858930.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignisphaera aggregans DSM 17230] gi|304377211|gb|ADM27050.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignisphaera aggregans DSM 17230] Length = 380 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 191/342 (55%), Gaps = 10/342 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + +RK DHI++ D + L+H+A+ ++SFD++D SV FLG KL FPL+I Sbjct: 9 IENRKWDHISLALDDYSQGPIDTWLSCVVLVHQAVADLSFDDIDTSVYFLGYKLKFPLII 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 S MTGG +K E +N++LA A + + + VGSQR M + + I +++ +R+ A +I Sbjct: 69 SGMTGGFSKAYE-LNKSLAEIAYRYGIGIGVGSQRAMLINSDTIHTYKIVREIAHGIPVI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G QL + G A + V + AD L +HLN LQE++Q G+ F I + Sbjct: 128 ANIGIAQL-IELGPNIAEKVVEAIEADALAIHLNMLQELVQLEGDRVFKGYIDAIRNVVE 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-----SDIG 235 + VP+++KEVG G+S + + GI+ D+AG GGT+W +IE R + + Sbjct: 187 RVKVPVIVKEVGHGISYELAKKLAEIGIQIIDVAGMGGTNWVKIELARYKDTKNIVMEAS 246 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F WGIPT S+ R IASGG+RNG+DI KSI LGA + G+A PFLK M Sbjct: 247 KEFITWGIPTGASIVEVRSALRTGIVIASGGIRNGIDIAKSIALGADICGMAQPFLKAVM 306 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +++ + IE + + ++M L +K + L +I + Sbjct: 307 NNTAEM--FIEKIIYQLKMAMMLTSSKDINALKNVPIVITGR 346 >gi|314951592|ref|ZP_07854638.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133A] gi|313596286|gb|EFR75131.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133A] Length = 354 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|69246580|ref|ZP_00604010.1| Isopentenyl-diphosphate delta-isomerase [Enterococcus faecium DO] gi|257881518|ref|ZP_05661171.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,502] gi|257890740|ref|ZP_05670393.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,410] gi|293560303|ref|ZP_06676800.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1162] gi|293567764|ref|ZP_06679105.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1071] gi|294620916|ref|ZP_06700117.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium U0317] gi|314938974|ref|ZP_07846239.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a04] gi|314943475|ref|ZP_07850242.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133C] gi|314948232|ref|ZP_07851626.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0082] gi|314991545|ref|ZP_07857021.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133B] gi|314994878|ref|ZP_07860005.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a01] gi|68195188|gb|EAN09644.1| Isopentenyl-diphosphate delta-isomerase [Enterococcus faecium DO] gi|257817176|gb|EEV44504.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,502] gi|257827100|gb|EEV53726.1| isopentenyl-diphosphate delta-isomerase [Enterococcus faecium 1,231,410] gi|291589349|gb|EFF21156.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1071] gi|291599527|gb|EFF30543.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium U0317] gi|291605753|gb|EFF35190.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium E1162] gi|313590860|gb|EFR69705.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a01] gi|313593829|gb|EFR72674.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133B] gi|313597847|gb|EFR76692.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133C] gi|313641683|gb|EFS06263.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0133a04] gi|313645365|gb|EFS09945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecium TX0082] Length = 354 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|254418893|ref|ZP_05032617.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas sp. BAL3] gi|196185070|gb|EDX80046.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas sp. BAL3] Length = 347 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 117/332 (35%), Positives = 184/332 (55%), Gaps = 5/332 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK H+++V G FD +H ALP++ D++D +FLG++L PLLIS+M Sbjct: 12 RKDQHLDVVLSGRGRHARDAGFDAIRFVHEALPDLDHDKIDLGADFLGRRLKAPLLISAM 71 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNL 123 TGG + E +N LA AA+ +A+AVGSQR + + LR AP T +++N+ Sbjct: 72 TGGPARA-EAVNARLAEAAQHLGIALAVGSQRTALEEGASGGLDMGLRHRAPDTPILANI 130 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA QL FG+ +A + + ++GA+ L +HLNPLQE QP G+ ++ + + + L ++ Sbjct: 131 GAAQLTRGFGLDEARRVIEMIGANALIVHLNPLQEACQPEGDRDWWGVGAALEALIRRIE 190 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQD 240 VP+++KE G GLS + G DIAG GG++W+ IE R + F D Sbjct: 191 VPVVVKETGAGLSGRTARRLIDMGAAAVDIAGAGGSNWALIEGERATDPGDRAHAAAFGD 250 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT ++ R C +A I SGG+R+G+D+ ++I LGA + G A+ L AM S++A Sbjct: 251 WGMPTARAIVDVRRACPDAVVIGSGGVRDGLDVARAIRLGADIAGQAAGVLSAAMVSTEA 310 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 VVA + + ++ F + + L Sbjct: 311 VVAHFQLVMRQLRTVCFCTNSANLSALRRAPL 342 >gi|194335565|ref|YP_002017359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pelodictyon phaeoclathratiforme BU-1] gi|254803427|sp|B4SCG2|IDI2_PELPB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|194308042|gb|ACF42742.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 357 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 185/351 (52%), Gaps = 20/351 (5%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK DHI I D + F+ + H ALPEISF ++D S FLGK + PL+ Sbjct: 9 TTERKQDHIEICLHGDVVFNGKTTGFERFAFEHAALPEISFSDIDLSTSFLGKSIGAPLM 68 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 ISSMTGG ++ +N+ LA AAE+ + + VGS R + + +SF + R+YAP + Sbjct: 69 ISSMTGGYSEAAT-LNQRLAEAAERFGIPLGVGSMRQALENRSYRESFAVVRKYAPTVQI 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+GA ++ + + + +L ADGL +HLN QE+ QP GNT+F + ++ALLS Sbjct: 128 FANIGAPEVAKGLTESEINTMLELLRADGLIVHLNAAQELFQPEGNTDFRHVLEQLALLS 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE---------SHRDL 230 + + VP+L+KEVGCG+S+ + +G++ D+AG GG SW ++E R Sbjct: 188 AKIPVPVLVKEVGCGISASAARQLIAAGVKAIDVAGAGGISWQKVEEIRYTRQFGQERRF 247 Query: 231 ESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +WGIPT L P N + +ASGG+ +G+D+ KS+ LGA L Sbjct: 248 SLQALDELLNWGIPTAQCLIDIGALKKESPGLNGIEIVASGGVGSGMDVAKSLALGAQLA 307 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A LK D + I S + MFL GT + EL T + + Sbjct: 308 ASARALLKALHDGV--LEETITSWLNDLRAVMFLTGTATIAELRHKTLITK 356 >gi|194333228|ref|YP_002015088.1| isopentenyl pyrophosphate isomerase [Prosthecochloris aestuarii DSM 271] gi|194311046|gb|ACF45441.1| isopentenyl-diphosphate delta-isomerase, type 2 [Prosthecochloris aestuarii DSM 271] Length = 357 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 115/353 (32%), Positives = 183/353 (51%), Gaps = 20/353 (5%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ I D F+ L H A+PEI+F E+D + FLG ++++P Sbjct: 7 LTAERKHHHVEICLHDDVRFSGKTTGFEHIELEHNAVPEINFSEIDLATTFLGHRINYPF 66 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +ISSMTGG K + +NR++A +EK K+ + VGS R + N +SF +RQ AP Sbjct: 67 MISSMTGGYTKAAD-LNRSIAETSEKLKIPLGVGSMRQALENDNFRQSFSIVRQAAPSIP 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +++N+GA ++ Q + ++ AD L +HLNP QE+ QP GNT+F+ + + + Sbjct: 126 VLANIGAPEIAGGVSKQDILSLIDMVAADALIVHLNPAQELFQPEGNTDFSHFLNNLEEI 185 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---------RD 229 SA+ +P++ KEVGCG+S+ + + +G D+AG GG SW ++E R Sbjct: 186 GSALPIPIIAKEVGCGISAETAKKLIDAGAAVIDVAGAGGLSWQKVEEVRYLRQFGEDRR 245 Query: 230 LESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASL 283 +WGIPT L P + IASGG+ NG+DI K+I LGA + Sbjct: 246 FSPSALDTLLNWGIPTSRCLADIAAMKRREPRYEPIEIIASGGIANGIDIAKAIALGADI 305 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A LK + + I + + +MFL G++ +++L +I H Sbjct: 306 AASAGMMLKALHHNI--LEQTILTWMNDLKAAMFLTGSRTIRDLQQTRTIIHH 356 >gi|258615046|ref|ZP_05712816.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium DO] Length = 347 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 178/335 (53%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ +N+ FD +IH LP+I+ +VD S + +G LS P I++ Sbjct: 2 NRKDEHVSLAKAFHDKQKNE--FDFVRIIHNPLPQIAVSDVDLSTQAVGFTLSSPFYINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LAI A + + +A GS + ++ + RQ PH +I+N Sbjct: 60 MTGGSEK-TKKINQDLAIVAREADLMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V++A +A+ + AD L +HLN QE++ P G+ +F + I +A+ Sbjct: 119 IGA-----GTSVERAKEAIRLFHADALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAI 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVPL++KEVG G++ + G+ DI+GR GTS+++IE+ R + ++ DWG Sbjct: 174 DVPLIVKEVGFGMTRETLNDLAALGVHTVDISGRSGTSFTQIENARRSKRELS-YLADWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A + +ASGG+RN DI K++ LGA+ G + L M + Sbjct: 233 QSTVSSLLEANEADTSMEILASGGIRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ ++E + ++G L+ + + Sbjct: 293 IILMKQWQEELRLLYTMVGATNTAALHQQSLIFSG 327 >gi|90420015|ref|ZP_01227924.1| putative dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90336056|gb|EAS49804.1| putative dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 356 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 125/327 (38%), Positives = 186/327 (56%), Gaps = 6/327 (1%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH++IV R H ALPEIS E+D S +FLG++L PLL Sbjct: 13 IAARKSDHLDIVLHPSLAARRADSGLSQIVFEHVALPEISLAEIDLSTQFLGRRLEAPLL 72 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + RINRNLA AA+ +A AVGSQR+ + +LR AP+ + Sbjct: 73 ISSMTGGPERAA-RINRNLAEAAQALGIAFAVGSQRIAIEGRASGGLDRQLRDAAPNVPI 131 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL +G+ + +AV ++ AD L +HLNPLQE +Q G+TN+ + + I L+ Sbjct: 132 LANVGAAQLVLGYGLAEVRRAVDMIDADALIVHLNPLQEAVQSGGDTNWRGVLAAIGELA 191 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---DIGI 236 + VP+++KEVG G+S+ + +G+ D+AG GGTSW+ +E+ R + + Sbjct: 192 RLLPVPIVVKEVGAGISATVARRLVDAGVHAIDVAGAGGTSWAAVEAERSPDPAQCATAL 251 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGI T ++ R C + I SGG+R+G+D K+I LGA L G A+ L A Sbjct: 252 TFSDWGISTARAIVDVRAACPQTVVIGSGGIRDGLDAAKAIRLGADLAGQAAASLGSADA 311 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKR 323 S +A VA + + + ++ F G+ Sbjct: 312 SPEAAVAHFQQVIAQLRIACFCTGSAD 338 >gi|227517820|ref|ZP_03947869.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX0104] gi|227074710|gb|EEI12673.1| isopentenyl pyrophosphate isomerase [Enterococcus faecalis TX0104] Length = 347 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 186/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I ++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIGKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLYTLLGKKTTEELTSTALILD 327 >gi|205373821|ref|ZP_03226623.1| isopentenyl pyrophosphate isomerase [Bacillus coahuilensis m4-4] Length = 352 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 116/336 (34%), Positives = 176/336 (52%), Gaps = 13/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI F D +H++LP S D+++ + +S P+ I+ Sbjct: 4 AQRKKDHIEHALN--IGQSGLTGFSDISFVHQSLPNTSLDDINIHTKIGELFISSPIYIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + +INRNL A+ + +AVGSQ D K+FE +R+Y P+ ++ Sbjct: 62 AMTGGGGEHTLQINRNLTEVAKHAGIPIAVGSQMAAIKDAEEKKTFEIVRKYNPNGIVFG 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V +A AV ++ AD L +HLN LQE+ P G+ +F +I + + Sbjct: 122 NLGS-----EATVDQAKAAVDMIEADALQIHLNVLQELTMPEGDRSFVGALHRIENIVQS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KE G G+S EL +GI D+ G GGT++S IE+ R S F++W Sbjct: 177 IDVPVIVKETGYGISKETAELLRGTGISAIDVGGFGGTNFSSIENARRNRS--LPFFENW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GIPT S+ A ++SGG+R+ ILKS++LGA GL+ FLK M D A Sbjct: 235 GIPTAASIVEA--AQQSIPVLSSGGIRDSESILKSLVLGAKAVGLSGFFLKILMDDGQTA 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ I + E + M LG +VQEL +I Sbjct: 293 LLEEISCMLDELKMMMCALGANQVQELQQVPIVISG 328 >gi|315152973|gb|EFT96989.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TX0031] Length = 347 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 187/335 (55%), Gaps = 12/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD +H++ E + +EVD S FL +L P +++ Sbjct: 2 NRKDEHLSLAKAFHKEKSND--FDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ + E IN+ L I A++T + +A GS D + ++++ R+ P ++ +N Sbjct: 60 MTGGSQRAKE-INQQLGIIAKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA GV++A +A+ + A+ L +H+N QE++ P G+ +F + +KI + A+ Sbjct: 119 IGA-----GLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S +E G++ D++G+GGTS+++IE+ R + ++ DWG Sbjct: 174 EVPVIVKEVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSF-LDDWG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSSDA 300 T +SL ++ + + + SGG+RN +DI+K + LGA G+A L M + + Sbjct: 233 QSTVISLLESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLEN 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +A ++ ++E + LLG K +EL ++ Sbjct: 293 TLALVQQWQEEVKMLSTLLGKKTTEELTSTALILD 327 >gi|86475803|dbj|BAE78980.1| Type II isopentenyl diphosphate isomerase [Streptomyces sp. KO-3988] Length = 363 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 177/339 (52%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK DH+ + + + FDD +H AL I +V + F G PL Sbjct: 1 MIAQRKDDHVQLAVEQQQQHSGRNQFDDVSFVHHALAGIDRPDVRLATSFAGLSWQAPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K INR+L IAA +T V +A GS F D + +F + R+ P + Sbjct: 61 INAMTGGSEK-TGIINRDLGIAARETGVPIASGSMSAYFKDPDCADTFSVLRKENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V +A +AV ++ AD L +H+N +QE + P G+ +F+ +I ++ Sbjct: 120 LANVNATA-----SVDRARRAVDLIRADALQIHVNTVQETVMPEGDRSFSSWVPQIEKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG GLS + L G+R D+ GRGGT ++RIE+ R D Sbjct: 175 AGVDVPVIVKEVGFGLSRETVRLLESLGVRAADLGGRGGTDFARIENGRRPLGDYAF-LH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 WG T L A+ +ASGG+R+ +D+ +++ LGAS G++ FL+ + D Sbjct: 234 GWGQSTAACLLDAQDA--PIPVLASGGVRHPLDVARALALGASGVGVSGTFLRTLLDDGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A++A I + + + LLG + +L LI + Sbjct: 292 AALIARISTWLDQLAALLTLLGARTPADLSRCDLLINGE 330 >gi|193214122|ref|YP_001995321.1| isopentenyl pyrophosphate isomerase [Chloroherpeton thalassium ATCC 35110] gi|193087599|gb|ACF12874.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chloroherpeton thalassium ATCC 35110] Length = 381 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 115/358 (32%), Positives = 181/358 (50%), Gaps = 23/358 (6%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ I P + FD + H A PE++F E+D S FLG+K+S+PL+ Sbjct: 15 IVERKQSHVEICLNGPIDYENKTNGFDHYFFEHTATPEVNFSEIDLSTTFLGRKISYPLM 74 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ISSMTGG + + +N+ LA + + + VGS R D + +SFE +R+ A + + Sbjct: 75 ISSMTGGYSGAM-FVNQMLAEICQHLNIPLGVGSMRQALEDKSYQQSFEIVRKVAQNVQI 133 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+GA ++ + +++ ADGL +H+NP QE+ QP GNTNF S++ L Sbjct: 134 FANIGAPEVAQGLSRDQLKFLTNLIKADGLIIHINPAQELFQPEGNTNFKGFLSQLKALI 193 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------DL 230 A+ +P++ KEVG G+S + +G+ D+AG GGTSW ++E R Sbjct: 194 DAVQIPVIAKEVGAGISGKVAARLIDAGVTAIDVAGAGGTSWQKVEKVRYERKYGIDKRF 253 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYC-------NEAQFIASGGLRNGVDILKSIILGASL 283 + +WGIPT L N + I+SGG+ NGV+I KS+ LGA + Sbjct: 254 SATAMNELLNWGIPTAECLVQITKLKASEPEKYNNIELISSGGISNGVEIAKSLALGAQI 313 Query: 284 GGLASPFLKPAM----DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A P LK + S D + I + + +MFL G + +L + R + Sbjct: 314 AASARPILKQLLAREDSSQDNLERTIMTWMNDLRATMFLAGVSSIAQLRQTKLICRQR 371 >gi|13475331|ref|NP_106895.1| isopentenyl pyrophosphate isomerase [Mesorhizobium loti MAFF303099] gi|20978502|sp|Q989L5|IDI2_RHILO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14026083|dbj|BAB52681.1| mlr6371 [Mesorhizobium loti MAFF303099] Length = 351 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 194/336 (57%), Gaps = 6/336 (1%) Query: 3 NDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DH++IV ++ H ALPE+ ++D LGK + PLLI Sbjct: 9 SRRKDDHLDIVLDRRTAPATVAAGWEYIRFEHCALPELDLTQIDLRASLLGKTMRAPLLI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLI 120 SSMTGG + E INR+L+ AA+ +AM VGSQRV N+ + LR+ AP L+ Sbjct: 69 SSMTGGVLRA-EAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRMAPDIPLL 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA QL G+ A +AV L ADGL +HLN LQE +QP G+ ++ + ++IA + Sbjct: 128 ANIGAAQLREADGLDLACRAVDALEADGLIVHLNALQEAVQPEGDRDWRGVLAQIARAAR 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIV 237 ++DVP++ KEVG GLS+ +K+G+ D+AG GGTSW+ +E + + + Sbjct: 188 SVDVPIVAKEVGSGLSASVACALVKAGVAVIDVAGAGGTSWAAVEGERARDAADRAVAMA 247 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWGIPTP S++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A S Sbjct: 248 FADWGIPTPASVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAATVS 307 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++AVVA E + ++ V+ F G+ + L L Sbjct: 308 TEAVVAHFEIVIRQLAVACFCTGSADLAALRQARLL 343 >gi|78483930|dbj|BAE47464.1| IPP isomerase [Paracoccus sp. N81106] gi|197085497|dbj|BAG68683.1| isopentenyl pyrophosphate isomerase [synthetic construct] Length = 360 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 136/340 (40%), Positives = 197/340 (57%), Gaps = 6/340 (1%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+ IV + G DR FD +H+ALP++ D VD FLG+ L PLL Sbjct: 4 ISRRKSDHLRIVTEGRGAQDRLDSGFDQVRFLHQALPDLDMDAVDTGTRFLGRSLGAPLL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTVL 119 IS+MTGG + ERIN ++A A ++A++VGSQR+ N LR AP + Sbjct: 64 ISAMTGG-PEEAERINLHIAEACAHHRIALSVGSQRIAVEAGGNGGLGASLRARAPQIPI 122 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+GAVQLNY FGV +A +AV ++ AD L LHLNPLQE IQ G+ NFA L +I L+ Sbjct: 123 LGNIGAVQLNYGFGVAQAQRAVDMIQADALILHLNPLQEAIQEGGDRNFAALLPRIEELA 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES--DIGIV 237 +++ VPL +KEVG GLS+ + +G+ D+AG GGTSW+R+E+ R + + Sbjct: 183 TSLPVPLGVKEVGAGLSAPVARCLIDAGVTILDVAGAGGTSWARVEAERGPDRLQALAAP 242 Query: 238 FQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPT SL P + + SGG+R+G+D ++I LGA L G A+ L A Sbjct: 243 FHDWGIPTTASLRAIAPMMGPDRILVGSGGVRHGLDAARAIRLGADLVGQAARALPAARH 302 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 S++A+ + + + ++MF G+ + L L+ Sbjct: 303 SAEALSDHLSDVVTQLRIAMFCTGSGDLAALRRAPLLVPG 342 >gi|260584341|ref|ZP_05852088.1| isopentenyl-diphosphate delta-isomerase, type 2 [Granulicatella elegans ATCC 700633] gi|260157859|gb|EEW92928.1| isopentenyl-diphosphate delta-isomerase, type 2 [Granulicatella elegans ATCC 700633] Length = 360 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 100/336 (29%), Positives = 176/336 (52%), Gaps = 13/336 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +H+ + ++ +H L E++ DEV + G L P I++ Sbjct: 10 KRKDEHVGHATQQY-QSQSHLELRQTRFVHHPLSEMAVDEVSLQTKMAGFTLETPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ + IN+ LA A +T +AMA GS + D + +SF + R+ P+ ++++N Sbjct: 69 ITGGSPRTT-LINQRLAQLAHETGIAMATGSMSIAMKDPSTAESFTIIRKENPNGIVLAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA + V+ A +A+ ++ A+G+ +H+N LQE++ P G+ +F I + S + Sbjct: 128 LGA-----HYTVESAKKAIDLIEANGIQIHVNTLQELVMPEGDRSFHHWLKNIEEIVSHV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DVP+++KEVG G S ++ + G++ DI+GRGGT+++ IE+ R ++ + +DWG Sbjct: 183 DVPVIVKEVGFGFSREAMQELINIGVQTIDISGRGGTNFAAIENARREDT-LFDELEDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--MDSSDA 300 T SL Y + IASGG+ + +DI+K + LGAS G++ FL DS Sbjct: 242 QTTVQSLVE--GYDLPCELIASGGIHSPLDIVKCLALGASAVGMSGEFLHLIRPQDSLPT 299 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + + LLG + + L ++ H Sbjct: 300 AIQTVNDWKNQLKNIYTLLGVSKTEALRQTDIILPH 335 >gi|21673096|ref|NP_661161.1| isopentenyl pyrophosphate isomerase [Chlorobium tepidum TLS] gi|32129637|sp|Q8KFR5|IDI2_CHLTE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|21646168|gb|AAM71503.1| isopentenyl-diphosphate delta-isomerase, putative [Chlorobium tepidum TLS] Length = 357 Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 177/348 (50%), Gaps = 20/348 (5%) Query: 1 MVNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H++I P D D W H A PE+ F ++D S EFLG + PL Sbjct: 8 ITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG + +NR L AAE+ ++ + VGS R + +SF + R AP Sbjct: 68 MISSMTGGYGNALA-LNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVP 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + + ++ A+GL +HLNP QE+ QP G T+F+ ++ + Sbjct: 127 IFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVHLNPAQELFQPEGGTDFSGFLDRLHDI 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------ 232 ++ + VP++ KEVGCG+S+ +G+R D+AG GG SW ++E R L+ Sbjct: 187 TATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDRFGHEER 246 Query: 233 ---DIGIVFQDWGIPTPLSLEMARPYCNEAQ------FIASGGLRNGVDILKSIILGASL 283 F +WGIPT L + + I+SGG+RNG+DI KSI LGA++ Sbjct: 247 FSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANI 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A LK + + I + + +MFL G+ +++L Sbjct: 307 AASAQHLLKALHSGT--LEETIRTWANDLRAAMFLTGSATIEQLKHAR 352 >gi|313885713|ref|ZP_07819462.1| isopentenyl-diphosphate delta-isomerase, type 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312619078|gb|EFR30518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 356 Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 103/339 (30%), Positives = 180/339 (53%), Gaps = 10/339 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+ + + DR F+D +H++L ++ D +D S + + S+P Sbjct: 3 LAQTRKNDHVRLALEQQRKDR-VSAFNDLRFVHQSLNQVRQDHLDLSSHWANQDHSWPFY 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+ MTGG K ++ N+ LA A +T + MA GS + S SF++ R+Y P+ + Sbjct: 62 INGMTGGTEK-TKQYNQKLAQVAHETGLPMATGSVSIALSQPQVADSFQVVREYNPNGFV 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA ++ A +AV +L A+ L +HLN QE++ P G+ ++ I+ + Sbjct: 121 MANLGA-----HHNLENAKRAVDLLDANALQIHLNIPQEVVMPEGDRDYGMWLDNISQIV 175 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + + +P+++KEVG G+S I + G+ D++GRGGT++ +IE+ R D Sbjct: 176 AHLGLPVIVKEVGFGMSRETIADLISVGVENIDVSGRGGTNFVQIENDRRTRLDF-QDLG 234 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 +WG TP SL A + ++A+ +ASGG+R+ +D++K+ LGA GL+ FL S Sbjct: 235 NWGQTTPESLLEALAFQDQARILASGGIRSYLDMVKAYALGAKAVGLSGRFLALVDQLSI 294 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + R M +LG + ++ + +I Q Sbjct: 295 EDCVQVVNDWRDSIAHMMLMLGVESIEAIATCPVVINGQ 333 >gi|227485446|ref|ZP_03915762.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus lactolyticus ATCC 51172] gi|227236576|gb|EEI86591.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus lactolyticus ATCC 51172] Length = 337 Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 190/341 (55%), Gaps = 14/341 (4%) Query: 1 MVN---DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M + +RK +HI K G F+D +L H +L +++FDE+D S+EFLG+K+S Sbjct: 1 MTSRRRERKDEHIENYLKTSGYS--DPLFEDVYLDHNSLSDVNFDEIDTSIEFLGRKISM 58 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 P++I++MTGG + IN +L+ + + MAVGSQ + D A +SF L + Sbjct: 59 PIMINAMTGGGESSAD-INEDLSSICKSLNIPMAVGSQTIGLEDDEAKESFTLIRE-KDM 116 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 V I NLGA + ++ A ++GA + +HLN QE+ P G+ NF I Sbjct: 117 VRIGNLGA-----ERSLEDFKNAAGMIGAHAIQVHLNVAQELFMPEGDKNFKGYYENIKK 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L ++DVP+++KE G GLS + +++G++Y D++G+GGT++ IE RD ESD Sbjct: 172 LIKSLDVPIIVKETGNGLSKATCQKLIEAGVKYLDVSGKGGTNFIEIEDMRDFESDYKE- 230 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMD 296 F DWG+PT ++ AR ++ I SGG++ VD+ K++ILGA + ++ L+ + Sbjct: 231 FYDWGVPTAKAIIDARSLSDDVFIIGSGGIKTAVDVAKALILGADMTAISGEALRYLLLG 290 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S +A ++ + + + M LLG K ++EL + + Sbjct: 291 SYEACYDYLKEMNRRLKIVMALLGVKNIEELKKVDYKLTGR 331 >gi|145590318|ref|YP_001152320.1| isopentenyl pyrophosphate isomerase [Pyrobaculum arsenaticum DSM 13514] gi|166226203|sp|A4WH01|IDI2_PYRAR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145282086|gb|ABP49668.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum arsenaticum DSM 13514] Length = 352 Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 175/340 (51%), Gaps = 14/340 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + D F++ LIH ALPEI F ++D S FLG + P I Sbjct: 3 IDKRKNDHIYLASSDLSQV-GTALFEEVVLIHNALPEIDFSDIDLSTNFLGAPVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG + +IN LA AAE+ + M VGSQR+ +FE+ +Q AP I Sbjct: 62 GAMTGGTE-LAGKINAELAKAAEEFGIPMYVGSQRIALVKPEVRWTFEVVKQNAPSIPKI 120 Query: 121 SNLGAVQLN---YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL V QAV ++ A + +HLN QE++QP G +F + K+ + Sbjct: 121 ANLGAPQLAQLSEKQLVDWVVQAVDMIDAYAVAVHLNAAQEVVQPEGEPSFRGVLEKLKI 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----LESD 233 + A PL++KEVG G+S + D+ G GGTS+ IE R L+ Sbjct: 181 VKRAAGRPLIVKEVGNGISKEVAAKLAEV-ADAIDVGGLGGTSFVAIEGARAADAWLQRR 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + F+ WGIPT S+ + IASGG+R+G+D +++ LGA ++ P LK Sbjct: 240 VAETFKYWGIPTAASICEVKSVYRGF-VIASGGIRSGLDGARALALGAHFFTMSQPLLKA 298 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ + IE++ E ++MFL G +R QEL + Sbjct: 299 TLEGR--LREEIEAVITEVKIAMFLTGVRRPQELAQVPRV 336 >gi|296109426|ref|YP_003616375.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus infernus ME] gi|295434240|gb|ADG13411.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanocaldococcus infernus ME] Length = 354 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 187/342 (54%), Gaps = 12/342 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK++HI + + LIH+ I+FD+++ V+ GK+LS P+++ Sbjct: 3 ISIRKLEHIFLCSHCNVEYDRSTLLECIELIHKGTSNINFDDINTEVKLFGKRLSAPIIV 62 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S MTGG + E IN+N+A A E+ + M +GSQR + ++ + + +++I Sbjct: 63 SGMTGGF-RGAEEINKNIAKAVEELNLGMGLGSQRAAIVNKELEDTYRVVRDYTESLVIG 121 Query: 122 NLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK----IA 176 NLGAV D + ++ +A+ ++ AD L +H NPLQEIIQP G+ NF ++S K I+ Sbjct: 122 NLGAVNFIKDGWDLEVIDRAIEMIDADALAIHFNPLQEIIQPEGDVNFKNISEKLKDIIS 181 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SD 233 DVP + K+VG G S D + D+ G GGTSW+++E +R + + Sbjct: 182 EYKKHRDVPFIAKQVGEGFSKEDAKELEY--FDAIDVQGSGGTSWAKVEYYRVKDKEKRE 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I F +WGIPT S+ + N+ I SGGLR+G+DI K + LG S +A P L+ Sbjct: 240 ILKNFLNWGIPTAQSILEVKSSYNKI-IIGSGGLRSGIDIAKCLALGCSCTAVALPVLRA 298 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+ + VV + +E ++MFL+G + ++EL +++ Sbjct: 299 ALKGYEKVVELLSKYIEELKITMFLVGAENIEELRRIPYILK 340 >gi|156937597|ref|YP_001435393.1| isopentenyl pyrophosphate isomerase [Ignicoccus hospitalis KIN4/I] gi|166226198|sp|A8AAN4|IDI2_IGNH4 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|156566581|gb|ABU81986.1| isopentenyl-diphosphate delta-isomerase, type 2 [Ignicoccus hospitalis KIN4/I] Length = 360 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 195/340 (57%), Gaps = 9/340 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++RK+DH+ I + ++ + D + HRA+PE++ +EV +E GKKLS PL++ Sbjct: 3 TSNRKLDHLRITLLE-DVEAGDTWLDFVKVPHRAVPELNLEEVVTEIEVFGKKLSAPLIV 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGGN +IN +A E+ + M VGSQR +F + R+ AP+ +LI Sbjct: 62 TGMTGGNEHAA-KINAVIAEVVEELGLGMGVGSQRAAVERPELEWTFRIARERAPNALLI 120 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QL +G+++ +A+ ++ AD + +HLN QE QP G+ ++ L +K++ L Sbjct: 121 ANLGAPQLLKGYGLEEIKKAIDMIDADAIAIHLNAAQESFQPEGDVDYKGLLNKLSELVD 180 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLESDI 234 ++ P+++KE G GL ++ + GI+ FD++G GGTSW R+E +R ++ + + Sbjct: 181 KVEKPIIIKETGAGLDYESVKALRELGIKAFDVSGSGGTSWVRVEMYRAREKGDEVLATV 240 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 WGIPT S+ AR +A IASGG+R+G+ +KS+ LGA L G+A P LK A Sbjct: 241 ADWMSSWGIPTAASIMEARAAAPDALVIASGGIRDGLHAVKSLALGADLVGVALPALKAA 300 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + ++S+ + +FL G+ + + ++ Sbjct: 301 YEGKEELKKFLKSMMLSIKIGLFLTGSPAPEHIKGKAIVL 340 >gi|148359625|ref|YP_001250832.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila str. Corby] gi|166226199|sp|A5IDN6|IDI2_LEGPC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148281398|gb|ABQ55486.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila str. Corby] Length = 342 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 119/333 (35%), Positives = 169/333 (50%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ L KK+ P +IS Sbjct: 9 EQRKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRLKKKVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-KSFELRQYAPHTVLIS 121 SMT G++ +E IN L A KTK AM VGSQR +D A + LR+ P L S Sbjct: 69 SMTAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQAAFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIVHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S+ A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSIRNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDLKEK 339 >gi|297619912|ref|YP_003708017.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus voltae A3] gi|297378889|gb|ADI37044.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus voltae A3] Length = 353 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 193/345 (55%), Gaps = 12/345 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC+ ++ K ++ L+H+ + + S +++D S+E GKKL P++ Sbjct: 6 IEYRKLEHL-IVCEHCNVEYKKGTLLNNVELVHKGISKSSLEDIDTSIELFGKKLDAPII 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++ +TGG+ + + IN+N+AIA E+ + M +GSQR ++ + + +++I Sbjct: 65 VAGITGGH-AIAKEINKNIAIAVEEMNLGMGLGSQRAAIVKKGLEDTYSVVRDYTSSLII 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK---IA 176 NLGAV D + + +AV ++ AD + +H NPLQE IQP G+T+F +L I Sbjct: 124 GNLGAVNFMKDNWNYETVKKAVDIIDADAMAIHFNPLQEAIQPEGDTDFRNLDYLSGVIN 183 Query: 177 LLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLES 232 ++P + K+VG G D G D+ G GGTSWS +E +R + Sbjct: 184 DYKKYFGNMPFIAKQVGEGFCQNDGLYLNNLGFDAIDVGGSGGTSWSAVEYYRVKDEEHK 243 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ + +WGIPT S+ R ++ IA+GG+R+GVDI KS+ LGA G+A P LK Sbjct: 244 NLSEKYLEWGIPTAASILDVRKEFSK-PLIATGGIRSGVDIAKSLALGADCCGIALPVLK 302 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 AM S + VV ESL KE ++MFL G ++EL +I+ + Sbjct: 303 AAMKSPEEVVKLFESLIKELKITMFLTGCNNIKELNSARYIIKGE 347 >gi|325568462|ref|ZP_08144829.1| isopentenyl diphosphate isomerase [Enterococcus casseliflavus ATCC 12755] gi|325158231|gb|EGC70384.1| isopentenyl diphosphate isomerase [Enterococcus casseliflavus ATCC 12755] Length = 346 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 173/335 (51%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD L+H++ P+I +V + + S P I++ Sbjct: 2 NRKDEHVSLAKAFHKEHSND--FDAVRLVHQSFPQIDVADVAITTTVFDRSFSSPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K + +IN+ LA A+ + MA GS D + SF +R+ P L++N Sbjct: 60 MTGGSEKTL-KINQELAEIAQACDLMMATGSVSAALKDPSVADSFRIVRKANPDGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V+ A +AV + GAD L +HLN QE++ P G+ F+ S + +++ Sbjct: 119 IGA-----GSPVENAQRAVELFGADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTIASV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S I+ L G++ D+AG GGTS+++IE+ R + ++ +G Sbjct: 174 AVPVVIKEVGFGMSRKTIQQLLAIGVQTIDVAGSGGTSFTQIENARRKKRELA-YLDTFG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T +SL A IASGG+R+ DI K++ LGA GL++ L + + Sbjct: 233 QSTVISLLEANEIQQPFTRIASGGVRDAYDIFKALCLGADSVGLSATILVLLLSKGKEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A ++S +++ + + G ++L + Sbjct: 293 IATLQSWKEQLQLLYTMAGQTSTKDLTKVQLIFSG 327 >gi|302379522|ref|ZP_07268007.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna ACS-171-V-Col3] gi|303234519|ref|ZP_07321156.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna BVS033A4] gi|302312429|gb|EFK94425.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna ACS-171-V-Col3] gi|302494353|gb|EFL54122.1| isopentenyl-diphosphate delta-isomerase, type 2 [Finegoldia magna BVS033A4] Length = 336 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 111/332 (33%), Positives = 181/332 (54%), Gaps = 7/332 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI ++VD SVEF GKK+ +P +I++ Sbjct: 2 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDVDLSVEFNGKKIDYPFMINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + + N+ Sbjct: 60 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVEDEAIESFELVREN--LIKNENI 116 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 L+ ++ +A+ ++ +D LHLNP+QE+I G+ F+ + I + ++ Sbjct: 117 VIGNLSARESLESVKKAIEMIDSDMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVENVN 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S I G+RY DIAG GGT++S IE +R + + F WGI Sbjct: 177 VPIIVKEVGYGMSKKTIYELYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFSE-FYCWGI 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT L + ++ IASGG++ +DI+K+++LGA + ++ L M + Sbjct: 236 PTAKILLEMKDKPDDLFLIASGGIKTAIDIVKALVLGADMTAMSGEVLSYLMHGGYEFAK 295 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++SL + + M +LG + + EL I Sbjct: 296 EFLDSLIYKLKMLMVMLGARNISELKNVDYKI 327 >gi|169824841|ref|YP_001692452.1| isopentenyl pyrophosphate isomerase [Finegoldia magna ATCC 29328] gi|167831646|dbj|BAG08562.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 29328] Length = 336 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 111/332 (33%), Positives = 181/332 (54%), Gaps = 7/332 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI ++VD SVEF GKK+ +P +I++ Sbjct: 2 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDVDLSVEFNGKKIDYPFMINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + + N+ Sbjct: 60 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVEDEAIESFELVREN--LIKNENI 116 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 L+ ++ +A+ ++ +D LHLNP+QE+I G+ F+ + I + ++ Sbjct: 117 VIGNLSARESLESVKKAIEMIDSDMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVENVN 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G+S I G+RY DIAG GGT++S IE +R + + F WGI Sbjct: 177 VPIIVKEVGYGMSKKTIYELYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFSE-FYCWGI 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT L + ++ IASGG++ +DI+K+++LGA + ++ L M + Sbjct: 236 PTAKILLEMKDKPDDLFLIASGGIKTAIDIVKALVLGADMTAMSGEVLSYLMHGGYEFAK 295 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++SL + + M +LG + + EL I Sbjct: 296 EFLDSLIYKLKMLMVMLGARNISELRNVDYKI 327 >gi|299143614|ref|ZP_07036694.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518099|gb|EFI41838.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 340 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 189/340 (55%), Gaps = 12/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK +H+ + + F+D L H +LPE F+E+D S FL KK+ FPL+ Sbjct: 1 MRKYRKREHVENYLRSTYV--GNPLFEDVFLYHNSLPECDFNEIDTSTVFLNKKVDFPLI 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ E IN +LA A++ + MAVGSQ ++F D +A KSFE +R+ ++ Sbjct: 59 INAMTGGSE-FAEGINLSLARVAKEFNIPMAVGSQTIVFEDKDARKSFECVRETLGDGIV 117 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +SNL V +A A+ ++ ADG+ +HLNP QE+ G+ F + I+ + Sbjct: 118 LSNLSG-----HATVDEAKYAIDMIKADGIQIHLNPAQELAMEEGDRGFKGIIKNISKIV 172 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +DVP+++KEVG G+S +G+RY D++G GGT++ +E+ R +D+ ++ Sbjct: 173 EGVDVPVIVKEVGFGISKDVAVKLYDAGVRYIDVSGFGGTNFFEVENLRVPSNDLSELY- 231 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT +SL + I+SGG++N ++++KSI+LGAS+ ++ L + Sbjct: 232 GWGIPTAMSLIEVNSLGYKDLNMISSGGIKNSLELVKSIVLGASMTAISGEILTYLIHGG 291 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + I ++ + V+M L G K + EL + + Sbjct: 292 YEYTMQYISNIIYKSKVTMLLTGAKNISELSRVNYRVTGK 331 >gi|122065240|sp|Q9RVE2|IDI2_DEIRA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase Length = 338 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 121/328 (36%), Positives = 189/328 (57%), Gaps = 2/328 (0%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+ H+ + + K D +RALPE + +E+ FLG++L P+L Sbjct: 10 IETRKLRHLEACLRPESQYQKVKTGLDSVPWPYRALPESNLEEMRLDTVFLGRRLKAPVL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG K INRNLA AA + M +GSQRVM +A +SF +R+ AP +LI Sbjct: 70 IGAMTGGAEKA-GVINRNLATAARNLGLGMMLGSQRVMLEHPDAWESFNVREVAPEILLI 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q +G ++A +AV + AD L +HLNPLQE +Q G+T + ++ ++ ++ Sbjct: 129 GNLGAAQFMLGYGAEQARRAVDEVMADALAIHLNPLQEALQRGGDTRWQGVTYRLKQVAR 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +D P+++KEVG GL + + +D+AG GGTSW+R+E + Sbjct: 189 ELDFPVIIKEVGHGLDAATLRALADGPFAAYDVAGAGGTSWARVEQLVAHGQVHSPDLCE 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L AR AQ IASGG+R+G+D +++ LGA + +A P L+PA+DSS+A Sbjct: 249 LGVPTAQALRQARKTLPGAQLIASGGIRSGLDAARALSLGAEVVAVARPLLEPALDSSEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELY 328 A + + +E V++F+ G + V+E+ Sbjct: 309 AEAWLRNFIQELRVALFVGGYRDVREVR 336 >gi|119476626|ref|ZP_01616936.1| isopentenyl-diphosphate delta-isomerase, type 2 [marine gamma proteobacterium HTCC2143] gi|119449882|gb|EAW31118.1| isopentenyl-diphosphate delta-isomerase, type 2 [marine gamma proteobacterium HTCC2143] Length = 334 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 132/330 (40%), Positives = 196/330 (59%), Gaps = 8/330 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++DRK DHI + FD HR LPE++ ++D S +FLGK S P +I Sbjct: 4 ISDRKDDHIQLALTSDHQSLPGGSFDRVSFEHRGLPELALSDIDISGDFLGKLTSAPFII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + ERIN++LA AAE+ + MA+GSQR A K +R +AP+ ++ Sbjct: 64 GAMTGGCDN-GERINQHLAEAAEQCHIPMALGSQRAALEQGLAQK---VRTWAPNATILG 119 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA QL GV+ A +AV + A+ L +HLNPLQE+IQP+G+ ++ D+ I ++ Sbjct: 120 NLGATQLR-QSGVELAKRAVDSVAANALVIHLNPLQELIQPDGDRDWNDVLEAIQNCANQ 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVF 238 + VP+++KEVG G+ + + +G+++ ++AGRGGTSW+ IE R+ I F Sbjct: 179 LPVPIIVKEVGAGIGPITARQLVDAGVQWIELAGRGGTSWASIELARNSSSRARQIAAPF 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG+ T L R C + I SGG+RNGVD+ K I LGA + LA PFL PA++SS Sbjct: 239 IDWGMDTTELLVSVRSACADVNLIGSGGVRNGVDMAKCIRLGAQMSALAQPFLAPALESS 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 AV+ IE L+++ ++FL +K + L Sbjct: 299 AAVIEKIEILQEQLRWTLFLTASKNLGALR 328 >gi|54294950|ref|YP_127365.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila str. Lens] gi|81822355|sp|Q5WUY8|IDI2_LEGPL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|53754782|emb|CAH16269.1| hypothetical protein lpl2029 [Legionella pneumophila str. Lens] Length = 342 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 120/333 (36%), Positives = 168/333 (50%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ K + P +IS Sbjct: 9 EQRKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFNKPVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 SMT G++ IE IN L A KTK AM VGSQR +D A +E LR+ P L S Sbjct: 69 SMTAGHSNAIE-INYRLMEACSKTKWAMGVGSQRRELTDKQAAFEWEPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLHAEALIIHCNPLQECIQPEGTTNFHGCWAALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 ++ P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 INSPVIVKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRADKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSTHNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +D V+ + ++ E +MF G+ + +L Sbjct: 307 TDQVLTQMNTIEYELKTAMFCTGSLVLDDLKEK 339 >gi|11499868|ref|NP_071112.1| isopentenyl pyrophosphate isomerase [Archaeoglobus fulgidus DSM 4304] gi|2648236|gb|AAB88970.1| carotenoid biosynthetic gene ERWCRTS, putative [Archaeoglobus fulgidus DSM 4304] Length = 317 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 121/313 (38%), Positives = 186/313 (59%), Gaps = 9/313 (2%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV 88 LIH+ALPE+ + ++D +EF GKKLSFPLLI+SMTGG+ + + IN L A E+ + Sbjct: 1 MMLIHKALPEVDYWKIDTEIEFFGKKLSFPLLIASMTGGHPE-TKEINARLGEAVEEAGI 59 Query: 89 AMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 M VGSQR D + SF + R+ AP+ + +N+G Q+ + GV+ +AV ++ AD Sbjct: 60 GMGVGSQRAAIEDESLADSFTVVREKAPNAFVYANIGMPQV-IERGVEIVDRAVEMIDAD 118 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + +HLN LQE IQP G+ N + + ++ VP++ KE G G+S + ++G Sbjct: 119 AVAIHLNYLQEAIQPEGDLNAEKGLEVLEEVCRSVKVPVIAKETGAGISREVAVMLKRAG 178 Query: 208 IRYFDIAGRGGTSWSRIESHR---DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + D+ G+GGT++S +E +R ++ +GI F DWG+PT S+ R IA+ Sbjct: 179 VSAIDVGGKGGTTFSGVEVYRVNDEVSKSVGIDFWDWGLPTAFSIVDCRGI---LPVIAT 235 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GGLR+G+D+ KSI +GA LG A PFL+ A++S++ V IE R+ +MFL G K V Sbjct: 236 GGLRSGLDVAKSIAIGAELGSAALPFLRAAVESAEKVREEIEYFRRGLKTAMFLTGCKNV 295 Query: 325 QELYLNTALIRHQ 337 +EL + + Sbjct: 296 EELKGLKVFVSGR 308 >gi|45357606|ref|NP_987163.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis S2] gi|74556255|sp|Q6M174|IDI2_METMP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|45047166|emb|CAF29599.1| isopentenyl-diphosphate delta-isomerase related protein [Methanococcus maripaludis S2] Length = 355 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 189/345 (54%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL+ Sbjct: 6 IEYRKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLI 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++++TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I Sbjct: 65 VAAITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLII 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 NLGAV D + + ++V ++ AD + +H NPLQE IQP G+ NF + + + Sbjct: 124 GNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKG-LNILKEII 182 Query: 180 SAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLE 231 S + +P + K+VG G S D + G D+ G GGTSW+ +E +R + + Sbjct: 183 SNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDEEQ 242 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + +WGIPT S+ + IA+GG+R G+DI KSI +GA+ G A P L Sbjct: 243 KNFSNQYFNWGIPTAASILEVNSAFSG-PIIATGGIRTGIDIAKSISIGANCCGTALPIL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K A+ SS+AV +E + KE +MFL G + EL +++ Sbjct: 302 KAALKSSEAVTTVLERMIKELKTTMFLTGCNNINELKSARYILKG 346 >gi|150401607|ref|YP_001325373.1| isopentenyl pyrophosphate isomerase [Methanococcus aeolicus Nankai-3] gi|171460866|sp|A6UW89|IDI2_META3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|150014310|gb|ABR56761.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus aeolicus Nankai-3] Length = 356 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 190/349 (54%), Gaps = 15/349 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++H+ + + +D LIH + +++D S+ GK L P+++ Sbjct: 5 IEFRKLEHLFVCNYCDVEYKKGTLLEDVELIHSGISNCDLEDIDTSINLFGKNLGAPIIV 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +++TGG++K E IN+N+AIA ++ + M VGSQR + ++++ + + ++++ Sbjct: 65 AAITGGHSKAKE-INKNIAIAIDELNLGMGVGSQRAALINEELMETYSVVRDYTSSLVLG 123 Query: 122 NLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------- 171 NLGAV D + + H+AV ++ ADG+ +H NPLQE IQP G+ NF + Sbjct: 124 NLGAVNFIEDGWDEETIHKAVEMIDADGMAIHFNPLQEAIQPEGDYNFKGIEILKDIMEN 183 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--- 228 +K S +P + K+VG G S D L G D+ G GGTSW+ +E +R Sbjct: 184 YNKTYNNKSNKKIPFIAKQVGEGFSKEDALLLNGLGFDSIDVGGSGGTSWAAVEYYRIKD 243 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + +WGIPT S+ + ++ IA+GG+R+G+DI KS+ +GA G+A Sbjct: 244 EESKKFSKKYLEWGIPTAASILEVKQNFDK-PIIATGGIRSGMDIAKSMAIGAQCCGVAL 302 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P LK A+ S+ V+ IE+ +E +MFL+G V EL + +I+++ Sbjct: 303 PVLKAALRGSEDVIKLIENYIEELKTTMFLMGCDNVNELMNSRYIIKNE 351 >gi|78187618|ref|YP_375661.1| isopentenyl pyrophosphate isomerase [Chlorobium luteolum DSM 273] gi|91207075|sp|Q3B213|IDI2_PELLD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78167520|gb|ABB24618.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium luteolum DSM 273] Length = 361 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 116/349 (33%), Positives = 179/349 (51%), Gaps = 20/349 (5%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK H++I D F+ + L H ALPE+SF ++ FLG+++ PL+ Sbjct: 9 TAERKHSHVDICLNGDVAFSTPTTGFERYRLRHNALPEVSFADITTESRFLGRRIGAPLM 68 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 ISSMTGG ++ E +NR LA AE+ ++ + VGS R D SF + R++AP + Sbjct: 69 ISSMTGGYSEAAE-LNRQLAETAERFQLPLGVGSMRQALEDDAYRDSFSVVRRHAPTIQI 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+GA ++ + H + ++ ADGL +HLN QE+ QP G T+F + IA ++ Sbjct: 128 FANIGAPEVAKGLSDKDLHIMLEMIRADGLIIHLNAAQELFQPEGGTDFRRVLDNIADIA 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------- 232 + + VP++ KEVGCG+S L++G++ D+AG GG SW ++E R Sbjct: 188 AKLPVPVIAKEVGCGISGAVARKLLEAGVQVIDVAGAGGISWQKVEEARYTRRFGSDTRF 247 Query: 233 --DIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILKSIILGASLG 284 + +WGIPT + IASGG+ +G+DI KSI LGA L Sbjct: 248 SQEGIEELLNWGIPTAACVVEVDALRPRTAGGRPFSIIASGGIHSGLDIAKSIALGADLA 307 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A L+ + + A I + ++ SMFL G+ V EL N + Sbjct: 308 ASAGALLRALHHGT--LEATITAWLQDLRASMFLTGSANVAELQNNRPI 354 >gi|159905291|ref|YP_001548953.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C6] gi|159886784|gb|ABX01721.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C6] Length = 355 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL+ Sbjct: 6 IEYRKLEHL-IVCDHCDVEYQKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLI 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++++TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I Sbjct: 65 VAAITGGHPKARE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLII 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 NLGAV D + + ++V ++ AD + +H NPLQE IQP G+ NF + + + Sbjct: 124 GNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKG-LNILKEII 182 Query: 180 SAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLE 231 S + +P + K+VG G S D + G D+ G GGTSW+ +E +R + + Sbjct: 183 SKYNKIHGKIPFIAKQVGEGFSKKDAIFLKEMGFDAIDVGGSGGTSWAAVELYRIKDEEQ 242 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + +WGIPT S+ + IA+GG+R G+DI KSI +GA+ G A P L Sbjct: 243 KNFSNQYFNWGIPTAASVLEVNSVFSG-PIIATGGIRTGIDIAKSIAIGANCCGTALPIL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K A+ SS+AV A +E + KE +MFL G+ + EL +++ Sbjct: 302 KAALKSSEAVTAVLERMIKELKTTMFLTGSNTINELKSARYILKG 346 >gi|312865082|ref|ZP_07725310.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus downei F0415] gi|311099193|gb|EFQ57409.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus downei F0415] Length = 334 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 13/337 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK HI FD+ LI +LP+ +++ F G+ FP I Sbjct: 1 MSSRKDQHIKHALAY---QSPYNSFDEVELIQSSLPKYDLADIELKTHFAGRDWDFPFYI 57 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 ++MTGG+ K + +N+ LA AE + GS + S+++R AP+ +L + Sbjct: 58 NAMTGGSAKA-KAVNQKLAQVAESCGLLFITGSYSPALKNPE-DDSYDVRLVAPNVLLGT 115 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G D V + V L L +H+N +QE++ P G F + S +A + Sbjct: 116 NIG-----LDKPVDLGQRVVEDLQPLLLQVHVNLMQELLMPEGEREFKNWPSNLADYAQK 170 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++LKEVG G+ ++ GL+ GI+ FDI+GRGGTS++ IE+ R W Sbjct: 171 ISVPVILKEVGFGMDKKTVQTGLELGIKTFDISGRGGTSFAYIENQRSERDR--SYLNTW 228 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G T +L EA+ +ASGG+RN +D++K+++LGA GL+ L + Sbjct: 229 GQSTVQTLLNLGELKEEAEILASGGVRNPLDMIKALVLGAKAVGLSRTMLDLVERYPVEK 288 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V+A +E + + + M L ++ + +L L+ + Sbjct: 289 VIAIVEGWKDDLCLLMCALNSRTIDDLKKVDYLLYGK 325 >gi|145224766|ref|YP_001135444.1| isopentenyl pyrophosphate isomerase [Mycobacterium gilvum PYR-GCK] gi|315445096|ref|YP_004077975.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. Spyr1] gi|189044240|sp|A4TE63|IDI2_MYCGI RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145217252|gb|ABP46656.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium gilvum PYR-GCK] gi|315263399|gb|ADU00141.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. Spyr1] Length = 342 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 117/332 (35%), Positives = 177/332 (53%), Gaps = 3/332 (0%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ DP F+ + L + AL + VD EF+G +L P+L Sbjct: 9 LQHRKRRHIDVCLTDPVDYQTLTTGFERYQLPYNALTQTDLHSVDLGTEFMGSRLRAPVL 68 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG + INRNLA AA++ V M +GSQRVM D A +SF++R AP ++I Sbjct: 69 IGAMTGGA-ALSGIINRNLAEAAQQLGVGMMLGSQRVMIDDAVAAESFDVRGVAPDVLVI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL V A+ +GA+GL +H NPLQE +Q NG+T+F+ S++ + Sbjct: 128 GNIGLAQLQPSM-VPALAAALDRVGANGLAVHTNPLQEAMQHNGDTDFSGSMSRLREVVD 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ P++LKEVG G+ + + + D+AG GGTSW+RIE + Sbjct: 187 SLGYPVMLKEVGHGIGASAAAQLVDCPVAAVDVAGAGGTSWARIEQFVRYGEVRYPALAE 246 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S A Sbjct: 247 WGIPTAQALTEVRGILPDVPLVASGGIRTGMDAAKALAMGAEVVAIARPLLAPAVESVGA 306 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 VV ++ E +V + G + L Sbjct: 307 VVDWLQRFIDELLVCLHGSGAANLSALRERGV 338 >gi|294501087|ref|YP_003564787.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] gi|294351024|gb|ADE71353.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] Length = 350 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 117/336 (34%), Positives = 176/336 (52%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKIDHI+ + DD +H +LP +V + LS P+ I+ Sbjct: 4 AKRKIDHIHHAIQTG--QHRLHGLDDIRFVHNSLPNTGVQDVHIDTKIGELLLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + ERINR+ A A ++AMAVGSQ D +S+ + RQ P+ ++ + Sbjct: 62 AMTGGGGQETERINRSFAQIAHHGQLAMAVGSQMAAIKDEKEEQSYRVVRQENPNGIIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV +L A+GL +HLN +QE++ P G+ +F D +I + Sbjct: 122 NLGS-----EATVEQAKKAVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIVRE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S+ ++ G+ DI G GGT++S+IE+ R + F DW Sbjct: 177 VTVPVIVKEVGFGMSAQAVQKLKDVGVEIVDIGGYGGTNFSKIENERR--AKHFHFFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 GI T SL + I SGG++ +DI KSI LGAS G+A FL M S +A Sbjct: 235 GISTAASLAEVSQHVEGMSIIGSGGIQTSMDIAKSIALGASATGMAGYFLSILMKSGLEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 VV I L +E M LG + +L +I Sbjct: 295 VVEEIAELHEELTFIMAALGATSIAKLQQMPLVITG 330 >gi|323489678|ref|ZP_08094905.1| isopentenyl pyrophosphate isomerase [Planococcus donghaensis MPA1U2] gi|323396809|gb|EGA89628.1| isopentenyl pyrophosphate isomerase [Planococcus donghaensis MPA1U2] Length = 344 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 106/332 (31%), Positives = 177/332 (53%), Gaps = 12/332 (3%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 DHI K FDD +H+ALP + ++ + L P+ I++MTGG Sbjct: 2 DHIQFALSTG--QSKKNMFDDIRFVHQALPNTAVSDICIKPKTGDLNLRSPVFINAMTGG 59 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAV 126 + +++N LA A +T +AMAVGSQ D N +S+ + R+ P + SNLG+ Sbjct: 60 GGQDTQQLNGLLARVARETGMAMAVGSQMAALKDANERQSYAVVRKENPDGIFFSNLGS- 118 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 + VQ+A AV ++GA+ L +HLN +QE+ P G+ +F +I + ++VP+ Sbjct: 119 ----EASVQQAKDAVDMIGANALQIHLNVVQELTMPEGDRDFRGALERIQAIKEGVNVPV 174 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 ++KE G G+S + D++G GGT+++ IE+ R + F+DWGIPT Sbjct: 175 IVKETGFGISRETAVKLRDCDVSAIDVSGFGGTNFAAIENKRRQKK--LSYFEDWGIPTA 232 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAI 305 ++ + ++ +ASGG+++ D++K+ +LGA GLA FLK AM + +++ I Sbjct: 233 PAIVEVKSVFDK-TVLASGGIQDARDMIKAFLLGADAVGLAGSFLKVAMQEGEKQLISDI 291 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 SL ++ + M LG K + EL A+I + Sbjct: 292 HSLYEDLAMMMTALGAKNLMELQKCPAIITGE 323 >gi|260461765|ref|ZP_05810011.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium opportunistum WSM2075] gi|319785310|ref|YP_004144786.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032406|gb|EEW33671.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium opportunistum WSM2075] gi|317171198|gb|ADV14736.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 349 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 196/337 (58%), Gaps = 6/337 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH++IV R ++ H ALPE+ ++D LGK + PLL Sbjct: 6 LSRRKDDHLDIVLDRRTAPARVAAGWESIRFEHCALPELDLTQIDLRASLLGKTMRAPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + E INR+L+ AA+ +AM VGSQRV ++ + LR+ AP L Sbjct: 66 ISSMTGGMPRA-EAINRHLSEAAQSLGIAMCVGSQRVSLQSRSSQGLTRALRRLAPDIPL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL G+ A +AV L ADGL +HLNPLQE +QP+G++++ + ++IA + Sbjct: 125 LANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEAVQPDGDSDWRGVMAQIARAA 184 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGI 236 + VP++ KEVG GLS+ + +++G+ D+AG GGT W+ +E + + + Sbjct: 185 RCVGVPIVAKEVGSGLSTSVACVLVEAGVAVIDVAGAGGTCWAAVEGERARDAADRAVAL 244 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F DWGIPTP ++ R + IASGG+R+GVD+ K+I LGA + G A+ L+ A Sbjct: 245 AFADWGIPTPAGVQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLRAATV 304 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S++AVVA E + ++ V+ F G+ + L L Sbjct: 305 STEAVVAHFEIVIRQLAVACFCTGSADLAALRQARLL 341 >gi|313623846|gb|EFR93967.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria innocua FSL J1-023] Length = 358 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 92/340 (27%), Positives = 177/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K + +D LI ++P + ++D + FLG + FP Sbjct: 8 LRERRKDEHVALGVKQ-NENLAPSSLEDIQLIGISIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVGIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVS-----PEVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGVTTVDLAGKGGTNFAQIENDRRRDQAYNFLL- 239 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L + + ++ASGG+RN +DI+K++ LGA G+A + D Sbjct: 240 DWGISTGQALMDMQHVDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VSKTIEKLELWKEQLRGLFVLANAKNIAELKETPLIVSGE 339 >gi|57753873|dbj|BAD86803.1| isopentenyl diphosphate isomerase [Streptomyces sp. KO-3988] Length = 363 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 164/338 (48%), Gaps = 11/338 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK DH+ + + FD+ +H AL I +V F G PL Sbjct: 1 MSVQRKDDHVRLAIEQQDTRSGINQFDEVSFVHHALAGIDRPQVSLGTSFAGISWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG + INR LA AA +T V +A GS D +F + R+ PH + Sbjct: 61 INAMTGGTAR-TGVINRGLATAARETGVPLASGSVHAYLKDPTCADTFRVLRRENPHGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V +A+ +L AD L +H+N QE P G+ +F S+I ++ Sbjct: 120 MANVNATA-----SVADTRRAIDLLEADALQIHVNTAQETAMPEGDRSFGSWVSQIEKIT 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GLS + + G+ D+ GRGGT ++RIE+ R D Sbjct: 175 AAVDLPVIVKEVGNGLSRETVLTLRQLGVSVADLGGRGGTDFARIENGRRPLGDYAF-LH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 DWG T L A+ +ASGG+R+ +D +++ LGAS G + F + +D Sbjct: 234 DWGQSTAACLLDAQGA--GLPVLASGGVRHPLDAARALALGASGVGASGVFPRTLLDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A++A I + + +LG + EL LI Sbjct: 292 EALIAQITNWLDQLAALQTMLGARTPAELASKDLLIHG 329 >gi|150402963|ref|YP_001330257.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C7] gi|150033993|gb|ABR66106.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C7] Length = 355 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 119/345 (34%), Positives = 191/345 (55%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL+ Sbjct: 6 IEYRKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLI 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++++TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I Sbjct: 65 VAAITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLII 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 NLGAV D + + ++V ++ AD + +H NPLQE IQP G+ NF + + + Sbjct: 124 GNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKG-LNILKEII 182 Query: 180 SAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLE 231 S + +P + K+VG G S D + G DI G GGTSW+ +E +R + + Sbjct: 183 SKYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDIGGSGGTSWAAVELYRIKDEEQ 242 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + +WGIPT S+ + IA+GG+R G+DI KSI +GA+ G A P L Sbjct: 243 KNFSNQYFNWGIPTAASILEVNSVFSG-PIIATGGIRTGIDIAKSITIGANCCGTALPIL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K A+ SS+AV A +E + KE +MFL G+ + EL +++ Sbjct: 302 KAALKSSEAVTAVLERMIKELKTTMFLTGSSNLNELKSARYVLKG 346 >gi|134046663|ref|YP_001098148.1| isopentenyl pyrophosphate isomerase [Methanococcus maripaludis C5] gi|132664288|gb|ABO35934.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus maripaludis C5] Length = 355 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 191/345 (55%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC ++ K +D LIH + D++D S+E GKKL+ PL+ Sbjct: 6 IEYRKLEHL-IVCDHCDVEYQKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLI 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++++TGG+ K E +N+N+AIA E+ + M VGSQR S ++ + + +++I Sbjct: 65 VAAITGGHPKAKE-VNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLII 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 NLGAV D + + ++V ++ AD + +H NPLQE IQP G+ NF + + + Sbjct: 124 GNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKG-LNILKEII 182 Query: 180 SAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLE 231 S + +P + K+VG G S D + G D+ G GGTSW+ +E +R + + Sbjct: 183 SKYNKLHGKIPFIAKQVGEGFSKKDTIFLKEMGFDAIDVGGSGGTSWAAVELYRIKDEEQ 242 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + +WGIPT S+ + + IA+GG+R G+DI KSI +GA+ G A P L Sbjct: 243 KNFSNQYFNWGIPTAASVLEVKSVFSG-PIIATGGIRTGIDISKSIAIGANCCGTALPIL 301 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K A+ SS+AV +E + KE +MFL G+ + EL +++ Sbjct: 302 KAALKSSEAVTTVLERMIKELKTTMFLTGSNNINELKSARYILKG 346 >gi|160946595|ref|ZP_02093798.1| hypothetical protein PEPMIC_00553 [Parvimonas micra ATCC 33270] gi|158446979|gb|EDP23974.1| hypothetical protein PEPMIC_00553 [Parvimonas micra ATCC 33270] Length = 338 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 8/335 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M N+RK +H+ K ++ F++ ++ H AL +++F E+D SV FLGKKLSFPL+ Sbjct: 1 MENERKKEHLENFLKSNF--KSNTLFENVYIEHFALTDLNFKEIDTSVNFLGKKLSFPLI 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG +N +LA + +A VGSQ+V D +++F + + + Sbjct: 59 INAMTGGAE-TSYDVNEDLARLCKNFNIAFEVGSQKVALQDEELVETFTVVK---DILDK 114 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+ L+ + +AV +L +D + LHLNP QEI+Q G+ NF+ + I + Sbjct: 115 KNIVISNLSALSSLDDVKRAVEMLNSDAISLHLNPAQEIVQFEGDRNFSGILENIENIVK 174 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +VP+++KE GCG+S E L G++Y DI+G GGT++ IE+ R + D ++ Sbjct: 175 NSNVPVIVKETGCGISKKTCEKLLNVGVKYIDISGFGGTNFIEIENLRRTDLDFTNIY-G 233 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT + R + I SGG++ G DI K+IILG+ + +A L+ + Sbjct: 234 WGIPTAKCIIDCRNISKDFTLIGSGGIKTGEDIAKAIILGSDMTAIAGEVLRYLVHGGYK 293 Query: 301 -VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++SL + + M LLG + ++EL I Sbjct: 294 FAEDYLKSLIYQTKMIMLLLGVRNIEELKKVEYKI 328 >gi|146317948|ref|YP_001197660.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 05ZYH33] gi|146320135|ref|YP_001199846.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 98HAH33] gi|253751172|ref|YP_003024313.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis SC84] gi|253753073|ref|YP_003026213.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis P1/7] gi|253754895|ref|YP_003028035.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis BM407] gi|145688754|gb|ABP89260.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Streptococcus suis 05ZYH33] gi|145690941|gb|ABP91446.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Streptococcus suis 98HAH33] gi|251815461|emb|CAZ51039.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis SC84] gi|251817359|emb|CAZ55095.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis BM407] gi|251819318|emb|CAR44670.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis P1/7] gi|292557732|gb|ADE30733.1| Isopentenyl-diphosphate delta-isomerase [Streptococcus suis GZ1] gi|319757441|gb|ADV69383.1| isopentenyl pyrophosphate isomerase [Streptococcus suis JS14] Length = 365 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 176/338 (52%), Gaps = 15/338 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F + R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L M Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREM 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + +G++ D++G GGT +++IE+ R +D + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASAGVQTIDVSGTGGTDFAKIENARRTFNDYA-YLEGWG 241 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVCPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D + AI+ + + M +LG K + EL ++ Sbjct: 302 RFDDGLQAIKVYQWQIAEIMTMLGAKNIAELRQKDLVL 339 >gi|68164580|gb|AAY87309.1| predicted isopentenyl-diphosphate delta-isomerase [uncultured bacterium BAC17H8] Length = 344 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 177/339 (52%), Gaps = 9/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK H+ + + FD L H ALPE +D + LG+ + PL I Sbjct: 6 TGDRKDAHLALAASGVALGEEDAGFDRVRLEHCALPECDLAAIDITTSCLGRAVGAPLFI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG + IN LA AE+ ++A+AVGSQR + LR AP LI Sbjct: 66 GAMTGGTAHA-DAINTALAEVAEEARIALAVGSQRASIEAGRSQS--ALRDRAPSVPLIG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG VQL G+ A +AV L AD +F+HLNPLQE +QP G T++ + + + Sbjct: 123 NLGGVQLALPGGIDLARRAVDDLQADAIFIHLNPLQEAVQPEGQTDWRHVLAALETAVRE 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP+++KEVG G+ + + G+ D+AG GGT+W+RIE+ R ++ + F DW Sbjct: 183 LEVPVMVKEVGAGIGPEVAKRLFEVGVHAVDVAGLGGTNWTRIEAARRDDAAVFDPFLDW 242 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--- 298 G+PT ++ AR C + IASGG+R+G+D K++ LGA+L +A P L+ Sbjct: 243 GLPTVDAIRAARAACPNGRLIASGGVRHGLDAAKALWLGAALVSMAGPVLRALTTDGIQA 302 Query: 299 ---DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + A++ + + +++FL G + I Sbjct: 303 PDPRSALQAMDRCKAQLRLALFLTGAPDLAAFARVPGFI 341 >gi|110597591|ref|ZP_01385876.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium ferrooxidans DSM 13031] gi|110340711|gb|EAT59188.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium ferrooxidans DSM 13031] Length = 357 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 20/353 (5%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ I D F+ + H A+PE+SF ++ S FLG+ ++ PL Sbjct: 8 ITIERKHSHVEICLHGDIAFSGKTTGFEHYEFEHNAVPELSFADISLSTTFLGRTIAAPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +ISSMTGG ++ +N+ LA AE+ ++ + VGS R + + +SF +R+YAP Sbjct: 68 MISSMTGGYSEAT-YLNQRLAETAEQFRIPLGVGSMRQALENSSHRESFAIVRKYAPSIQ 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + +L ADGL +H N QE+ QP GNT+F + ++ L Sbjct: 127 IFANIGAPEIAKGLTDSDISIMLDLLEADGLIVHFNAAQELFQPEGNTDFRHVLDHLSTL 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------D 229 ++ + VP++ KEVG G+S ++G++ D+AG GGTSW ++E R Sbjct: 187 TARIPVPVIAKEVGSGISGAAATQLFEAGVKAVDVAGAGGTSWQKVEEIRYTRQFGTESR 246 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLRNGVDILKSIILGASL 283 + +WGIPT L+ + + I+SGG+++G+DI KS+ LGA+L Sbjct: 247 FSTPALEELLNWGIPTAQCLKEIAALKISNKIFSTVELISSGGIKSGMDIAKSLALGANL 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 G A LK + + IES + MFL G ++EL + +++ Sbjct: 307 GASAGHLLKALHEGV--LELTIESWLNDLRAVMFLTGAATIEELRSKSLIVKQ 357 >gi|295706434|ref|YP_003599509.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] gi|294804093|gb|ADF41159.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] Length = 350 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 117/336 (34%), Positives = 176/336 (52%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKIDHI+ + DD +H +LP +V + LS P+ I+ Sbjct: 4 AKRKIDHIHHAIQTG--QHRLHGLDDIRFVHNSLPNTGVHDVHIDTKIGELLLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + ERINR+ A A ++AMAVGSQ D +S+ + RQ P+ ++ + Sbjct: 62 AMTGGGGQETERINRSFAQIAHHGQLAMAVGSQMAAIKDEKEEQSYRVVRQENPNGIIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + V++A +AV +L A+GL +HLN +QE++ P G+ +F D +I + Sbjct: 122 NLGS-----EATVEQAKKAVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIIRE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S+ ++ G+ DI G GGT++S+IE+ R + F DW Sbjct: 177 VTVPVIVKEVGFGMSAQAVQKLKDVGVEIVDIGGYGGTNFSKIENERR--AKHFHFFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 GI T SL + I SGG++ +DI KSI LGAS G+A FL M S +A Sbjct: 235 GISTAASLAEVSQHVEGMSIIGSGGIQTSMDIAKSIALGASATGMAGYFLSILMKSGLEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 VV I L +E M LG + +L +I Sbjct: 295 VVEEIAELHEELTFIMAALGATSIAKLQQMPLVITG 330 >gi|71483054|gb|AAZ32487.1| isopentenyl-diphosphate delta-isomerase FMN-dependent [uncultured euryarchaeote Alv-FOS4] Length = 337 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 186/336 (55%), Gaps = 8/336 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + DRK++HI + D ++ + ++DD L H +P + +++D VEFLG+KL +P+++ Sbjct: 5 IKDRKLEHIKLCL-DKNVNASYNYWDDVILKHVTIPRVDLEDIDLRVEFLGRKLEYPIIV 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG+ + + IN N+A AAE+ + MAVGSQR +++ + + + + Sbjct: 64 DAMTGGHP-VAKSINENIAKAAEELGIGMAVGSQRSAIVAPELEETYGVIRNYDVPLRLG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA Q +G + +A+ ++ A L +H N LQE +QP G+ + L S+++ L+ Sbjct: 123 NLGAPQFALGYGESEIEKAMEMVDAHALEIHFNYLQEAVQPEGDRVVSGLLSRLSPLAR- 181 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PL+ KE G G + G R D++G GTS++ +E +R ++G +F DW Sbjct: 182 -KYPLVAKETGAGFDLHSAKTLADMGFRAIDVSGVSGTSFAAVEYYRGG--ELGRIFWDW 238 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+P+P L R I SGGLRNG+D +++ LGA++ G A L A S++AV Sbjct: 239 GLPSPYCLIELREL--NVPLIGSGGLRNGLDAARALALGATVAGFARAILPHATKSAEAV 296 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 IE + +E V+MFL G V ++ + R + Sbjct: 297 QKKIEEIVQEMRVAMFLSGATSVGDMKNAECVFRGE 332 >gi|223934068|ref|ZP_03626018.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus suis 89/1591] gi|223897259|gb|EEF63670.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus suis 89/1591] Length = 365 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 176/338 (52%), Gaps = 15/338 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F + R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L + Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREV 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + G++ D++G GGT +++IE+ R +D + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGGTDFAKIENARRTFNDY-TYLEGWG 241 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D + AI++ + + M +LG K + EL ++ Sbjct: 302 RFDDGLQAIKTYQWQMAEIMTMLGAKNIAELRQKDLVL 339 >gi|119356224|ref|YP_910868.1| isopentenyl pyrophosphate isomerase [Chlorobium phaeobacteroides DSM 266] gi|166226196|sp|A1BDG7|IDI2_CHLPD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119353573|gb|ABL64444.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 187/353 (52%), Gaps = 20/353 (5%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK++H+ I + + + + + H+A+PEI++ +++ S LG+ + PL Sbjct: 11 ITIERKLNHVEICLHGNVSFEGTTTGLERYAIEHQAVPEINYADINLSATLLGRTIGAPL 70 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +ISSMTGG ++ +NR A AAE ++ + VGS R ++ +SF + R+ AP Sbjct: 71 MISSMTGGYHEAAT-LNRQFAQAAEHFRIPLGVGSMRQALENNEHRESFAVVRKAAPSVP 129 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ + + ++ ADGL +HLN QE+ QP GNTNF ++A L Sbjct: 130 VFANIGAPEVAAGLESSQIETMLDLIQADGLIVHLNAAQELFQPEGNTNFHGFLDQLASL 189 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------D 229 ++ VP++ KEVG G+S+ L + +G++ D+AG GGTSW ++E R Sbjct: 190 TAKTPVPVIAKEVGSGISAEAARLLIDAGVKVIDVAGAGGTSWQKVEEVRYIKRFGNENR 249 Query: 230 LESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + +WGIPT LE P + IASGG+++G+D+ K+I+LGAS+ Sbjct: 250 FSPEALNELLNWGIPTATCLEEIGRLKKNHPQYQPIEIIASGGIQSGIDVAKTILLGASV 309 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A LK + ++ IE + MFL G+ +++L ++H Sbjct: 310 AASAGRLLKALHEG--KLLQTIEMWLNDLKAVMFLTGSLSLEQLQKKRMTLKH 360 >gi|313637945|gb|EFS03255.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria seeligeri FSL S4-171] Length = 358 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 93/340 (27%), Positives = 179/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K K DD LI ++P + ++D + G ++FP Sbjct: 8 LRERRKDEHVALGVKQ-NEQLGKSSLDDIQLIGTSIPRYNVRDIDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN +LA A++ + MAVGSQ +++ I ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAKEVGIPMAVGSQSAALKNNSLIDTYQVVRNINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVS-----PEVELKDGLRAVEMLHANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWG+ T +L M P + F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPDAPKIAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +A E +++ LL K + EL + ++ + Sbjct: 300 VEKTIAKFELWKEQLRGLFVLLDAKNIAELKETSLVVNGE 339 >gi|67003502|dbj|BAD99413.1| IPP isomerase [Brevundimonas sp. SD212] Length = 350 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 119/324 (36%), Positives = 183/324 (56%), Gaps = 8/324 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI+ V G+ + +H ALP+++ D++D S FLG++L+ P LISSM Sbjct: 11 RKDEHIDHVRAGRGLSGASSGLEAVRFVHDALPDLALDQIDLSARFLGRRLNLPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF----ELRQYAPHTVLI 120 TGG ++ E IN LA AA+ VA+AVGSQRV +LR+ AP +++ Sbjct: 71 TGGPSRA-EAINARLAEAAQALGVALAVGSQRVALETAGGSGGSGLGPDLRRRAPDALIL 129 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQ +GV +A +A+ ++GAD L LHLNPLQE +QP G+ ++ ++ I +++ Sbjct: 130 ANLGAVQFALGYGVDEARRAMEMIGADALILHLNPLQEGVQPEGDRDWRGVAQGIERIAA 189 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIV 237 A +++KE G GLS+ G+ D+AG GGT+W IE R + Sbjct: 190 AFPGQVVVKETGAGLSAAVARRLADMGVAALDVAGAGGTNWGLIEGARATGGRAEALAAP 249 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F DWG+PT SL + I SGG+++G+D +++ LGA L G A+ L+ A+ S Sbjct: 250 FADWGVPTARSLRDCAQAAPDLGLIGSGGIKDGLDAARAVRLGADLVGQAAGVLEAALTS 309 Query: 298 SDAVVAAIESLRKEFIVSMFLLGT 321 + AVV E + + ++ F G+ Sbjct: 310 TQAVVDHFELMAAQLRLACFCTGS 333 >gi|145220348|ref|YP_001131057.1| isopentenyl pyrophosphate isomerase [Prosthecochloris vibrioformis DSM 265] gi|189044241|sp|A4SGE6|IDI2_PROVI RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|145206512|gb|ABP37555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobium phaeovibrioides DSM 265] Length = 355 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 179/350 (51%), Gaps = 18/350 (5%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +RK H++I + D + + L H ALPE+++D + +FLGK++ PL+ Sbjct: 9 TAERKHSHVDICLRGDVAFSTITTGLERYRLRHNALPELNYDNLSTETDFLGKRIGAPLM 68 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 ISSMTGG ++ E +N LA AAE+ ++ + VGS R + + SF + R++AP T + Sbjct: 69 ISSMTGGYSEAAE-LNGKLAEAAERFQLPLGVGSMRQALEESSHRDSFAVVRRHAPTTQI 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+GA ++ + ++ ADGL +HLN QE+ QP G T+F + ++A ++ Sbjct: 128 FANIGAPEIAKGLSSDDLQTMIEMIRADGLIIHLNAAQELFQPEGGTDFRRVLDEVAAIT 187 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------- 232 + + VP++ KEVGCG+S+ L +G+R D+AG GG SW ++E R Sbjct: 188 AKLSVPVIAKEVGCGISAPVARQLLNAGVRVIDVAGAGGISWQKVEEARYTRRFGTDDRF 247 Query: 233 --DIGIVFQDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGL 286 +WG PT L IASGG+++G+DI KSI LGA L Sbjct: 248 STRGLEELLNWGTPTAECLVAVNALRENPTPPFSLIASGGIQSGIDIAKSIALGADLAAS 307 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A L+ + + + + + +MFL G+ + EL N + + Sbjct: 308 AGALLRSLHSGT--LEETLTTWMNDLRAAMFLTGSATIAELQNNRPISKQ 355 >gi|270158158|ref|ZP_06186815.1| isopentenyl-diphosphate delta-isomerase type 2 [Legionella longbeachae D-4968] gi|289163582|ref|YP_003453720.1| isopentenyl pyrophosphate isomerase [Legionella longbeachae NSW150] gi|269990183|gb|EEZ96437.1| isopentenyl-diphosphate delta-isomerase type 2 [Legionella longbeachae D-4968] gi|288856755|emb|CBJ10566.1| isopentenyl pyrophosphate isomerase [Legionella longbeachae NSW150] Length = 341 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 121/333 (36%), Positives = 174/333 (52%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + + D+ +LIH ALP+++FD+V LG+ + P LIS Sbjct: 9 EQRKQDHIKLALMPENQTADLSTLDNINLIHEALPDLNFDDVSIKGSRLGQVVEKPFLIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-KSFELRQYAPHTVLIS 121 SMT G+ + + INRNL A + AM VGSQR +D A + +LRQ P L S Sbjct: 69 SMTAGHRRA-KHINRNLIEACAQNGWAMGVGSQRRELTDPKAAFEWRDLRQDFPEVSLYS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL + ++ + L AD L +H NPLQE IQP G T + +A L Sbjct: 128 NLGIAQL-IETSIKDIQRLTDALQADALIIHCNPLQECIQPEGTTTYRGCWHALAHLIKN 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 ++P+++KE GCG S + GI D+ G GGT W RIE HR + I I Sbjct: 187 FELPIIVKETGCGFSRETMVRLNDIGIAAIDVGGLGGTHWGRIEGHRATDDPIRQQAAIT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 FQ+WGI T S+++A + SGG+ NG++ K LGA+ G A P L+ A+ S Sbjct: 247 FQNWGIDTATSVKLAMELNPSYEIWGSGGVYNGLNAAKLFALGATTVGYAKPMLEAALKS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 S+ V ++++ E V+MF G++ + +L Sbjct: 307 SEQVSLCMQTIEYELKVAMFCTGSRTLADLKKK 339 >gi|193213416|ref|YP_001999369.1| isopentenyl pyrophosphate isomerase [Chlorobaculum parvum NCIB 8327] gi|226707317|sp|B3QQG6|IDI2_CHLP8 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|193086893|gb|ACF12169.1| isopentenyl-diphosphate delta-isomerase, type 2 [Chlorobaculum parvum NCIB 8327] Length = 357 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 178/348 (51%), Gaps = 20/348 (5%) Query: 1 MVNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+++ P D D W H A PEI F E+D + EFLG + PL Sbjct: 8 ITAERKHSHVDVCLNRPVCFDGQDTGLDAWRFEHNAAPEIDFAEIDLTAEFLGHAIGMPL 67 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 +ISSMTGG + +NR LA AAE+ ++ + VGS R ++ +SF +R AP Sbjct: 68 MISSMTGGYGDALA-LNRTLAEAAERFRIPLGVGSMRQALEGNSHRESFSIVRSSAPSVP 126 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + +N+GA ++ ++ V ++ ADGL +HLNP QE+ QP G+TNF ++ + Sbjct: 127 IFANIGAPEVAAGLSREQLSTLVELIEADGLIVHLNPAQELFQPEGSTNFRGFLDRLHDI 186 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES------ 232 ++ ++VP++ KEVGCG+S+ +G++ D+AG GG SW ++E R L+ Sbjct: 187 TATINVPVIAKEVGCGISAPLASKLADAGVKAIDVAGAGGISWQKVEECRYLDRFGNEER 246 Query: 233 ---DIGIVFQDWGIPTPLSLEMARPYCNEAQ------FIASGGLRNGVDILKSIILGASL 283 F +WGIPT L ++ I+SGG+RNG+D+ KSI LGA + Sbjct: 247 FSPSALDEFLNWGIPTAECLTGIAALKEKSPEYGSLAVISSGGIRNGLDVAKSIALGADI 306 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A LK + + I + + +MFL G+ +L Sbjct: 307 AASAQHLLKALRAGT--LEETIRTWANDLRAAMFLTGSATTAQLKHAP 352 >gi|296107667|ref|YP_003619368.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila 2300/99 Alcoy] gi|295649569|gb|ADG25416.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila 2300/99 Alcoy] Length = 342 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 118/333 (35%), Positives = 166/333 (49%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ K + P +IS Sbjct: 9 EQRKRDHIELALMPANQSNELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-KSFELRQYAPHTVLIS 121 SMT G++ +E IN L A KTK AM VGSQR SD A + LR+ P L S Sbjct: 69 SMTAGHSNALE-INSRLMEACSKTKWAMGVGSQRRELSDKQAAFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEVWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDLKEK 339 >gi|254821726|ref|ZP_05226727.1| isopentenyl pyrophosphate isomerase [Mycobacterium intracellulare ATCC 13950] Length = 348 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 120/340 (35%), Positives = 175/340 (51%), Gaps = 10/340 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK HI++ +P G D +HL + AL + S ++D S F G L P+L Sbjct: 8 MKNRKRRHIDVCLSEPVGYAGVSTGLDRYHLPYNALTQTSLGDIDLSTTFFGANLRSPIL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG + INRNLA AA++ V M +GSQR+M A SF +R AP Sbjct: 68 IGAMTGGAE-LSGTINRNLAAAAQQLGVGMMLGSQRIMLDSALGERAADSFTVRDVAPDA 126 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+G QL A +A+ +GAD L +H NPLQE +Q NG+T+F+ ++ Sbjct: 127 LLFGNIGLSQLAKAAVPDLA-KALDRVGADALAVHTNPLQEAMQHNGDTDFSGSVDRLRE 185 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKS----GIRYFDIAGRGGTSWSRIESHRDLESD 233 + A+ P+LLKEVG G+ + L + + D+AG GGTSWSR+E Sbjct: 186 AADALGYPVLLKEVGHGIGGAAVAELLGADGTLPVAGIDVAGAGGTSWSRVEQFVRYGEL 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R E +ASGG+R G+D K+I LGA + +A P L Sbjct: 246 RHPELADWGIPTARAVVEVREALPEIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPA 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++S+ AVV ++ E V + G + L + Sbjct: 306 AIESTAAVVDWLQPFIDELRVCLHGCGAANLAALRDVDLV 345 >gi|289434665|ref|YP_003464537.1| isopentenyl-diphosphate delta-isomerase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170909|emb|CBH27451.1| isopentenyl-diphosphate delta-isomerase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 358 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 94/340 (27%), Positives = 178/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K K DD LI ++P + ++D + G ++FP Sbjct: 8 LRERRKDEHVALGVKQ-NEQLGKSSLDDIQLIGTSIPRYNVRDIDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN LA A++ V MAVGSQ +++ I ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAKEVGVPMAVGSQSAALKNNSLIDTYQVVRHINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVS-----PEVELKDGLRAVEMLQANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWG+ T +L M P + F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPAAPKIAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +A E +++ LL K + EL + ++ + Sbjct: 300 VEKTIAKFELWKEQLRGLFVLLDAKNIAELKETSLVVNGE 339 >gi|302023330|ref|ZP_07248541.1| isopentenyl pyrophosphate isomerase [Streptococcus suis 05HAS68] gi|330832131|ref|YP_004400956.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis ST3] gi|329306354|gb|AEB80770.1| isopentenyl-diphosphate delta-isomerase [Streptococcus suis ST3] Length = 365 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 176/338 (52%), Gaps = 15/338 (4%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 DRK H+ + + K F + +H +LP+ DEVD S G +FP I++ Sbjct: 10 DRKDQHVGLANQQYSATPAKDFTETL-FVHHSLPQTKVDEVDISTSVAGLDFAFPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K E INR L I K+A+A GS D + ++F + R+ P+ ++ +N Sbjct: 69 MTGGSKKTRE-INRLLGIMGHFGKIALASGSVSAAIKDPSVAETFSVMRRENPYGIIFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA V+ A +AV +L A+ + +H+N QEI+ P G+ +F I L M Sbjct: 128 LGA-----HHSVENAKRAVDLLEANAIQIHVNAPQEIVMPEGDRDFTMWLKNIETLVREM 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +VP+++KEVG G+S + G++ D++G GGT +++IE+ R +D + WG Sbjct: 183 EVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGGTDFAKIENARRTFNDY-TYLEGWG 241 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-- 298 T SL A E IASGG++ +DI+KS+ LGA L G+++ FL+ D Sbjct: 242 QSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVKSLALGADLVGMSNHFLQYVKDGKGH 301 Query: 299 --DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D + AI++ + + M +LG K + EL ++ Sbjct: 302 RFDDGLQAIKTYQWQMAEIMTMLGAKNIAELRQKDLVL 339 >gi|48477568|ref|YP_023274.1| isopentenyl pyrophosphate isomerase [Picrophilus torridus DSM 9790] gi|73920023|sp|Q6L1S1|IDI2_PICTO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|48430216|gb|AAT43081.1| hypothetical isopentenyl-diphosphate delta-isomerase [Picrophilus torridus DSM 9790] Length = 349 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 188/343 (54%), Gaps = 17/343 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HI I ++ + F+DD ++HRA+PE+ F+++D V+FLGK+ ++P+L Sbjct: 1 MIENRKEEHIKIA-ENENVVSEHNFWDDIRIVHRAIPEVDFNDIDTGVKFLGKQFNYPIL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + IN+NLA+ AE K+ M VGS RV + N +F + Sbjct: 60 ISSMTGGTE-TAKIINKNLAMTAEHFKIGMGVGSMRVAVKNKNTADTFSVINDYKIPAKF 118 Query: 121 SNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +N+GA QL +++ AD L +H N LQE++QP G+ N + ++ Sbjct: 119 ANIGAPQLVRQDSDSLSDNDIEYIYNLINADFLIVHFNFLQEMVQPEGDRNSKGVIKRLK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--- 233 ++ + + ++ KE G G S D L +G++ D+ G GGTS++ IE +R +++ Sbjct: 179 DIAGSYN--VIAKETGSGFSKEDALSLLDAGVKAIDVGGLGGTSFAAIEYYRAQKANDEI 236 Query: 234 ---IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G F +WGIP+P S+ + I SGGLRNG+D+ K+I+ GA+LGG A Sbjct: 237 KMHTGKAFWNWGIPSPASI---KYCSLGEPVIGSGGLRNGLDLAKAIMFGATLGGFAREL 293 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LK A S D V +E + + ++M L ++ + EL + Sbjct: 294 LKDANTSFDDVKRQMEMIINDLKITMMLTSSRNIDELKHARYI 336 >gi|120403168|ref|YP_952997.1| isopentenyl pyrophosphate isomerase [Mycobacterium vanbaalenii PYR-1] gi|166918476|sp|A1T741|IDI2_MYCVP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|119955986|gb|ABM12991.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium vanbaalenii PYR-1] Length = 342 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 117/328 (35%), Positives = 176/328 (53%), Gaps = 3/328 (0%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ + F+ + L + AL + VD S EFLG L P+L Sbjct: 9 LQHRKRRHIDVCLTEAVDYQSLTTGFERYRLPYNALTQTDLHSVDLSTEFLGSHLRAPVL 68 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG + INRNLA AA++ + M +GSQRVM D A SFE+R AP +LI Sbjct: 69 IGAMTGGA-ALSGIINRNLAAAAQQLGIGMMLGSQRVMIDDEAAAASFEVRGVAPDILLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL V A+ +GA+GL +H NPLQE +Q +G+T+F+ ++ ++ Sbjct: 128 GNIGLAQLRSSM-VPGLAAALDRVGANGLAVHTNPLQEAMQHDGDTDFSGSIGRLCDVAG 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A+ P++LKEVG G+ + + I D+AG GGTSW+RIE + Sbjct: 187 AIGYPVVLKEVGHGIGAAAAAELVGCPIAAIDVAGAGGTSWARIEQFVRYGDVRYPALAE 246 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S +A Sbjct: 247 WGVPTAQALTEVRQMLPDVPLVASGGIRTGMDAAKALAMGARVVAVARPLLAPAVESVEA 306 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELY 328 VV ++ E +V + G + L Sbjct: 307 VVDWLQRFIDELLVCLHGCGAANLSALR 334 >gi|16800488|ref|NP_470756.1| isopentenyl pyrophosphate isomerase [Listeria innocua Clip11262] gi|20978490|sp|Q92BX2|IDI2_LISIN RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|16413893|emb|CAC96651.1| lin1420 [Listeria innocua Clip11262] Length = 358 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 94/340 (27%), Positives = 177/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K + +D LI ++P + ++D + FLG + FP Sbjct: 8 LRERRKDEHVALGVKQ-NENLAPSSLEDIQLIGTSIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVS-----PEVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGVTTVDLAGKGGTNFAQIENDRRRDQAYNFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + D Sbjct: 240 DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIISSLKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VSKTIEKLELWKEQLRGLFVLANAKNIAELKETPLIVSGE 339 >gi|320333534|ref|YP_004170245.1| Isopentenyl-diphosphate delta-isomerase [Deinococcus maricopensis DSM 21211] gi|319754823|gb|ADV66580.1| Isopentenyl-diphosphate delta-isomerase [Deinococcus maricopensis DSM 21211] Length = 345 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 122/328 (37%), Positives = 187/328 (57%), Gaps = 2/328 (0%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++DRK+ HI + D F+ +RALP+++ D+VD FLG+ L P+L Sbjct: 10 LSDRKLRHIEACLRADSQYAHVTTGFERLRWPYRALPDLNVDDVDLRTTFLGRALRAPVL 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG + INRNLA AA++ V + +GSQRVM + SF++R AP +LI Sbjct: 70 IGAMTGGAQRAAH-INRNLATAAQRLGVGLMLGSQRVMLERPDTAASFQVRAVAPDVLLI 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLGA Q + +AV +GAD L +H+NPLQE +Q G+ +A +++++A + Sbjct: 129 GNLGAAQFLRGYDEAHVVRAVEGVGADALAIHVNPLQEALQAGGDRAWAGVAARLAEVVP 188 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + PLLLKEVG GL + ++G D+AG GGTSW+R+E + + Sbjct: 189 RVPYPLLLKEVGHGLDGAAVRAAARAGFAALDVAGAGGTSWARVEQLVRFGAVRTPDLCE 248 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+PT +L AR IASGG+R+G+D K++ LGA+ +A P L PA+DS++A Sbjct: 249 VGVPTAQALLGARAAAPGVPLIASGGIRSGLDAAKALALGATAVAVARPLLAPALDSAEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELY 328 V A + + +E V++F+ G V+ + Sbjct: 309 VEAWLATFLEELRVALFVGGFGSVRAVQ 336 >gi|54297979|ref|YP_124348.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila str. Paris] gi|81822548|sp|Q5X3K0|IDI2_LEGPA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|53751764|emb|CAH13186.1| hypothetical protein lpp2034 [Legionella pneumophila str. Paris] Length = 342 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 118/333 (35%), Positives = 165/333 (49%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ K + P +IS Sbjct: 9 EQRKRDHIELALMPANQSNELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-KSFELRQYAPHTVLIS 121 SMT G++ +E IN L A KTK AM VGSQR SD A + LR+ P L S Sbjct: 69 SMTAGHSNALE-INSRLMEACSKTKWAMGVGSQRRELSDKQAAFEWAPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ D++G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRANKDPIRHRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+DS Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEVWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V+ + + E +MF G++ + +L Sbjct: 307 TGQVLTQMNIIEYELKTAMFCTGSRVLDDLKEK 339 >gi|294085699|ref|YP_003552459.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665274|gb|ADE40375.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Puniceispirillum marinum IMCC1322] Length = 354 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 124/344 (36%), Positives = 187/344 (54%), Gaps = 16/344 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +DRK H+++ D L H A+PE D +D S +FLG LS PL I Sbjct: 11 TSDRKDTHLDLAMSPRAQAGVSNSMDRLRLTHCAMPECDLDAIDISTQFLGYDLSAPLFI 70 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +MTGG K +RIN LA A+ VA+AVGSQR + ++++ LR AP +I Sbjct: 71 GAMTGGT-KRADRINAALAETAQSCSVALAVGSQRAGLENGSSLR--HLRTLAPDIPIIG 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGAVQL G+ A A+ L AD + +HLNPLQE +QP G+ ++ +++ I + Sbjct: 128 NLGAVQLAGKGGLDLAKAAIDDLQADAIAIHLNPLQEAVQPEGDRDWCGVAAAIEQAVTD 187 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV--FQ 239 + VP+++KEVG G+ + + G+ D+AG GGT+W+RIE+ R + D + F Sbjct: 188 LTVPVIVKEVGAGIGASLAHRLFEMGVMAVDVAGLGGTNWTRIEAARITDDDAALFAPFL 247 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD--- 296 DWG+PT L C Q IASGG+R+G+D+ K++ +GAS+ +A P LK +D Sbjct: 248 DWGLPTLECLIDVCNRCPHHQIIASGGIRHGLDVAKALWVGASMVSMAGPMLKMLIDMSD 307 Query: 297 --------SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S D + A+ +K+ +++FL G+ + L A Sbjct: 308 DEVAIETLSPDTLSQALMDWQKQLALALFLTGSADIASLRQAEA 351 >gi|18312188|ref|NP_558855.1| isopentenyl pyrophosphate isomerase [Pyrobaculum aerophilum str. IM2] gi|20978489|sp|Q8ZYF6|IDI2_PYRAE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|18159625|gb|AAL63037.1| conserved protein (possible oxidoreductase) [Pyrobaculum aerophilum str. IM2] Length = 352 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + + +F++ LIH ALPEI EVD + FLG + P I Sbjct: 3 IDKRKDDHIYLASSELSQ-IGSAWFEEVVLIHNALPEIDLSEVDLTTRFLGAPVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG + +IN LA AAE+ + + VGSQR+ +FE+ +Q APH + Sbjct: 62 GAMTGGTE-LAGKINAELAKAAEEFGIPIYVGSQRIALVKPEVKWTFEVVKQNAPHVPKV 120 Query: 121 SNLGAVQL---NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL + QA+ ++ A + +HLN QE++QP G F + K+ + Sbjct: 121 ANLGAPQLAELGERELEEWVVQAIDMIDAYAIAIHLNAAQEVVQPEGEPRFKGVLEKLKI 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----LESD 233 + A PL++KE G G+S D+ G GGTS+ IE R L+ Sbjct: 181 VKRAAGKPLIVKETGNGISKEVAARL-SGIADAIDVGGFGGTSFVAIEGARAKESPLQKR 239 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + ++ WGIPT S+ + IASGG+R+G+D K+I LGA+ ++ P LK Sbjct: 240 LAETYKWWGIPTAASICEVKSAYAGY-LIASGGIRSGLDGAKAIALGANFFTMSQPLLKA 298 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+D + I + E +MFL G + VQEL L + Sbjct: 299 ALDGR--LREEIAMIIAELKTAMFLTGARTVQELALVPRV 336 >gi|78189406|ref|YP_379744.1| isopentenyl pyrophosphate isomerase [Chlorobium chlorochromatii CaD3] gi|91207070|sp|Q3AQM4|IDI2_CHLCH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|78171605|gb|ABB28701.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Chlorobium chlorochromatii CaD3] Length = 357 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 182/350 (52%), Gaps = 20/350 (5%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ + + F+ ++ H ALPEI+F E+D S FLG+ + PL Sbjct: 9 LTIERKQSHVELCLHANVAFSGKTTGFERFYFEHNALPEIAFAEIDCSTTFLGRHIGAPL 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 ++SSMTGG ++ +NR LA AAE ++ + VGS R +SF + R+YAP T+ Sbjct: 69 MVSSMTGGYSEAST-LNRQLAEAAEHFQIPLGVGSMRQTLESPLHRESFAVTRKYAPTTL 127 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+GA ++ + +L ADGL +HLN QE+ QP GNTNF + +I L Sbjct: 128 LFANIGAPEVAQGLSQSDVAMMLDLLRADGLIVHLNAAQELFQPEGNTNFHRVLEEIHNL 187 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---------D 229 + +VP+++KEVG G+ + E +++G++ D+AG GG SW ++E +R Sbjct: 188 CATTNVPIIVKEVGNGIGAAVAEQLMEAGVQALDVAGAGGISWQKVEEYRFLQQFGHEHR 247 Query: 230 LESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S+ +WGIPT L +P + + IASGG+ +G+D+ KS+ +GA L Sbjct: 248 FSSNALDELLNWGIPTTNCLLDIAELKRLQPQFQQIEIIASGGVSSGMDVAKSLAMGAQL 307 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A L + + A IE + +MFL G V L + L Sbjct: 308 AASARHLLHALHAGT--LTATIEQWLNDLKAAMFLTGAATVDALRTKSLL 355 >gi|313633334|gb|EFS00181.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria seeligeri FSL N1-067] Length = 358 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 92/340 (27%), Positives = 177/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K K DD LI ++P + + D + G ++FP Sbjct: 8 LRERRKDEHVALGVKQ-NEQLGKSSLDDIQLIGTSIPRYNVRDTDLTTTIFGTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + ++IN +LA A++ + MAVGSQ +++ + ++++ R P V+ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAKEVGIPMAVGSQSAALKNNSLMDTYQVVRDINPSGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ + +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVS-----PEVELKDGLRAVEMLQANAIQIHINPAQELVMQEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KHSPVPVVVKEVGFGMTRETVTTLANIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWG+ T +L M P F++SGG+R +DI+KS+ LGA G+A + D Sbjct: 240 DWGLSTGQALLDMQHPAAPNVAFLSSGGIRTPLDIVKSLALGAESVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +A E +++ LL K + EL + ++ + Sbjct: 300 VEKTIAKFELWKEQLRGLFVLLDAKNIAELKETSLVVNGE 339 >gi|241896114|ref|ZP_04783410.1| isopentenyl pyrophosphate isomerase [Weissella paramesenteroides ATCC 33313] gi|241870628|gb|EER74379.1| isopentenyl pyrophosphate isomerase [Weissella paramesenteroides ATCC 33313] Length = 346 Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 178/336 (52%), Gaps = 10/336 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + + + LIH++LP++ +V ++ + P I +M Sbjct: 8 RKDEHLALAEAEYRRHQPVSSLEQVRLIHQSLPDLKISDVSTAIRNENFNFTTPFYIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + RIN+ LA AA++T +AMAVGSQ V D +AI+SF + R P +++N+ Sbjct: 68 TGGSIR-TGRINQQLAEAAKETGLAMAVGSQSVALKDKDAIESFTIARDTNPDGFIMANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA Q A Q V ++GA+ L +H+N QE++ P G+ NF I + + Sbjct: 127 GA-----GHSAQSAQQVVDMIGANALEVHVNVAQEVVMPEGDENFL-WLDNIIEIIQTVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ-DWG 242 VP+L+KEVG G+ + I+ ++G Y +I GR GT+++ IE+ R + + F DWG Sbjct: 181 VPVLIKEVGFGMDATTIKKLYENGAEYVNIGGRSGTNFAVIENRRYRDKEFNYDFLYDWG 240 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAV 301 T SL A+ + A+GG++N +D+LK+ +LGA G+A FL D + + Sbjct: 241 QTTAESLLEAQSLQQKPIIFATGGIQNPLDVLKAQVLGAKAVGVAGHFLHTTLQDGTTGL 300 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + I + +++ L+G + +L ++ + Sbjct: 301 INEITNWQQQLRKLYALVGARSANDLTKVPYVLSPE 336 >gi|297587224|ref|ZP_06945869.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 53516] gi|297575205|gb|EFH93924.1| isopentenyl-diphosphate delta-isomerase [Finegoldia magna ATCC 53516] Length = 341 Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 109/332 (32%), Positives = 181/332 (54%), Gaps = 7/332 (2%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI K R FD +L H +LPEI +++D S+EF GKK+ +P +I++ Sbjct: 7 ERKQEHIENYLKSEY--RGNNLFDCVYLEHTSLPEIDLNDIDLSMEFNGKKIDYPFMINA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + + IN +LA + + MAVGSQ++ + AI+SFEL + + N+ Sbjct: 65 MTGGGDSCCD-INEDLARLCKTFNIPMAVGSQKIALVESEAIESFELVREN--LIKNENI 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 L+ ++ +A+ ++ AD LHLNP+QE+I G+ F+ + I + +D Sbjct: 122 VIGNLSARESLESVEKAIEMIDADMFGLHLNPIQELIMEEGDREFSGIKDNIKNIVENVD 181 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ I G+RY DIAG GGT++S IE +R + + F WGI Sbjct: 182 VPIIVKEVGYGMNKKTIYDLYDLGVRYIDIAGFGGTNFSEIEDNRRFDMEFSE-FYCWGI 240 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT L + ++ IASGG++ +DI+K++++GA + ++ L M + Sbjct: 241 PTAKILLDMQDKPDDLFLIASGGIKTAIDIVKALVIGADMTAMSGEVLSYLMHGGYEFAK 300 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++SL + + M +LG + + EL I Sbjct: 301 EFLDSLIYKLKMLMVMLGARNISELKNVDYKI 332 >gi|126458645|ref|YP_001054923.1| isopentenyl pyrophosphate isomerase [Pyrobaculum calidifontis JCM 11548] gi|126248366|gb|ABO07457.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pyrobaculum calidifontis JCM 11548] Length = 352 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 187/342 (54%), Gaps = 16/342 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK DHI++ D +FD+ LIH ALPE+ +VD S +FLG K+S P I Sbjct: 1 MEKRKDDHIHLAYSDVSQV-GSPWFDEVLLIHNALPELDLADVDLSADFLGAKVSAPFGI 59 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG + +IN LA AAE+ + M VGSQRV + + +FE+ +Q+AP + Sbjct: 60 GAMTGGTE-LAGKINAELAKAAEEFGIPMYVGSQRVALQNPSVRWTFEVVKQHAPTIPKV 118 Query: 121 SNLGAVQLN---YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL+ + V+ +AV ++ A + +HLN QE++QP G F + KI L Sbjct: 119 ANLGAPQLSALPEEKVVEWVVEAVEMIDAYAVAIHLNAAQEVVQPEGEPRFRGVLEKIKL 178 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLE 231 + A+ P+++KEVG G+S E + D+ G GGTS+ IE R +L Sbjct: 179 VKRAVGKPVIVKEVGNGISKEVAERLAGV-VDAIDVGGLGGTSFVSIEGARALGAGLELY 237 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I VF+ WGIPT S+ R IASGG+R+G+D +++ LGA+ ++ P L Sbjct: 238 RRISEVFKTWGIPTAASICEVRSVFGGY-VIASGGVRSGLDGARALALGANFFTMSQPLL 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +D + I ++ E V+MFL+G +RV +L + Sbjct: 297 RAVLDGR--IREEISAVLTELKVAMFLVGARRVSDLAKVPRV 336 >gi|150399803|ref|YP_001323570.1| isopentenyl pyrophosphate isomerase [Methanococcus vannielii SB] gi|150012506|gb|ABR54958.1| isopentenyl-diphosphate delta-isomerase, type 2 [Methanococcus vannielii SB] Length = 356 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 188/344 (54%), Gaps = 12/344 (3%) Query: 2 VNDRKIDHINIVCKDPGIDRNK-KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK++H+ IVC ++ K +D LIH + + +D S+E GKKL P++ Sbjct: 6 IEYRKLEHL-IVCDHCDVEYKKGTLLEDVELIHSGVSNCDLNNIDTSIEIFGKKLDAPII 64 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I+++TGG+ K + +N+N+A+A E+ + M VGSQR + I ++ + + +++I Sbjct: 65 IAAITGGHPKA-KDVNKNIAVAIEELNLGMGVGSQRAGILKPDLIDTYSIVRDYTSSLVI 123 Query: 121 SNLGAVQLNYD-FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 NLGAV D + + ++V ++ A+ + +H NPLQE IQP G+ NF L ++S Sbjct: 124 GNLGAVNFIEDGWNEEIISKSVEMIDANAIAIHFNPLQEAIQPEGDVNFKGLGLLKEIIS 183 Query: 180 SAMDV----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLES 232 ++ P + K+VG G S D K G D+ G GGTSW+ +E +R + + Sbjct: 184 KYKNIYKNIPFVAKQVGEGFSKKDAIFLKKMGFDAIDVGGSGGTSWAAVELYRIKDEKQR 243 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + + ++GIPT S+ + + IA+GG+R G+DI KSI +GA G A P LK Sbjct: 244 EFLNQYYNFGIPTAASIFEVKSGFSN-PIIATGGIRTGIDIAKSIAIGADCCGTALPILK 302 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ SSD V+ +E + KE +MFL G + +L +++ Sbjct: 303 AALKSSDEVINVLERMIKELKTTMFLTGCGSITDLKSARYILKG 346 >gi|313887573|ref|ZP_07821256.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846451|gb|EFR33829.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 338 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 119/340 (35%), Positives = 191/340 (56%), Gaps = 12/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK +HI + + F D L + +LPEI++DE+D S+ FL KK+ FPL+ Sbjct: 1 MRKYRKTEHIENFLRSTYV--GDPLFSDIFLYNDSLPEINYDEIDTSLNFLNKKVKFPLM 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG++ + E INR+LA A + + MAVGSQ + D ++ KSFE +R+ ++ Sbjct: 59 INAMTGGSD-LSEEINRSLANVAAEYDLPMAVGSQTIALEDKDSRKSFEIVREIIKDGIV 117 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ISNL + A AV +L AD + +HLNP QE++Q G NF + + I + Sbjct: 118 ISNLSGFA-----STEDAKLAVDLLRADAIQIHLNPAQELVQVEGERNFCGILNNIEKIV 172 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +VP+++KEVG G+S ++ G+ Y DI+G GG+++ IE+ R+ +DI +F Sbjct: 173 NTSEVPVIVKEVGFGMSQKTVKKLHDVGVEYVDISGYGGSNFFEIENLREPNADISDLFS 232 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT LSL + ++ IASGG++ VDI+KS+ LGA + ++ L + Sbjct: 233 -WGIPTALSLIETKKLDYDDMHLIASGGIKTSVDIVKSLCLGADMTAISGEILSYIVRGG 291 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + I+ L ++ + M L G K + EL + + Sbjct: 292 YEYTLRYIDGLMEKTKMLMMLNGAKNISELQKVDYKVTGK 331 >gi|294786244|ref|ZP_06751498.1| isopentenyl-diphosphate delta-isomerase, type 2 [Parascardovia denticolens F0305] gi|315225777|ref|ZP_07867565.1| isopentenyl-diphosphate delta-isomerase [Parascardovia denticolens DSM 10105] gi|294485077|gb|EFG32711.1| isopentenyl-diphosphate delta-isomerase, type 2 [Parascardovia denticolens F0305] gi|315119909|gb|EFT83041.1| isopentenyl-diphosphate delta-isomerase [Parascardovia denticolens DSM 10105] Length = 402 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 182/374 (48%), Gaps = 44/374 (11%) Query: 2 VNDRKIDHINIVCK------DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 ++ RK DH+ + + +P D IH+ALPEI+ D+VD S G Sbjct: 22 ISSRKDDHVRLAARIRSQEVEPYQLAVWDELDQCEFIHQALPEIAVDQVDISSTVAGIAQ 81 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYA 114 S P I++MTGG +N LA A +T VAMA+GS ++ + LR+ Sbjct: 82 SSPFFINAMTGGTV-GTNALNSQLAAVASRTGVAMALGSMSILVKKPEVQGFYRTLRKDN 140 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 P+ I+NLGA + V+ A V + A L LHLN QEI+ P G+ +F + Sbjct: 141 PNVNFIANLGA-----EHSVEAAQLVVETVDAQALQLHLNAAQEIVMPEGSRDFRGWTDH 195 Query: 175 IALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + AMD VP+++KEVG GLS +E G+R+ D+AG+GGT++ RIE+ R E Sbjct: 196 IGRIVDAMDKKGVPVIVKEVGFGLSRETVERLYSLGVRWVDLAGKGGTNFIRIENERRKE 255 Query: 232 --SDIG----------------------IVFQDWGIPTPLSLEMARPY---CNEAQFIAS 264 +G + WGI T SL AR + IAS Sbjct: 256 ALRRLGCQGEARNELQLHGSAHADSLDFSYLRSWGISTLRSLLEARSVGERFGDLHIIAS 315 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+RN +D++K + GA GL+ FLK + + VA ++ ++ + M LLG + Sbjct: 316 GGVRNPLDVVKYLASGADCVGLSGFFLKAIQEEGVEGTVALVDEWKEHIRLLMALLGVRD 375 Query: 324 VQELYLNTALIRHQ 337 +Q+L + +L+ Q Sbjct: 376 IQDLRSSASLVYPQ 389 >gi|313608891|gb|EFR84660.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria monocytogenes FSL F2-208] Length = 358 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 176/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + LG + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAASS-LEDIQLIGTSIPRYNVKDIDLTTTILGSNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL +I + Sbjct: 300 VTKTIEKLELWKEQLRSLFVLADAKNITELKTTPLIISGE 339 >gi|257065707|ref|YP_003151963.1| isopentenyl pyrophosphate isomerase [Anaerococcus prevotii DSM 20548] gi|256797587|gb|ACV28242.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus prevotii DSM 20548] Length = 336 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 111/330 (33%), Positives = 177/330 (53%), Gaps = 11/330 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK +HI K I +D ++ H AL +++ +E+D S+EFLG+++S PL++++ Sbjct: 6 QRKDEHIENYLKSEII--TNTLLEDIYIEHNALSDMNMEEIDTSIEFLGRRISMPLMVNA 63 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG IN +L+ E + MA GS+ + D + SF L + + I NL Sbjct: 64 MTGGGE-AGSDINEDLSSICEAVGIPMASGSEAIAIKDEESRDSFTLLKD-KDIIKIGNL 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G+ + ++ A ++ AD + +HLN QE++ P G+ +F L I L +D Sbjct: 122 GS-----ERSLEDFIFAKDLIDADIMQVHLNIAQELVMPEGDRDFRGLGENIRNLVEKLD 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+++KE G G+S L G+ Y D+AG+GGT++ IE RD+E+D F DWGI Sbjct: 177 TPIIVKETGSGISKSVASKLLDMGVEYIDVAGKGGTNFIEIEDLRDVETDFSE-FYDWGI 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 PT S+ R + IASGGLRN DI+KSII+GA + ++ L+ + +A Sbjct: 236 PTAKSIIDVRSVSEDVFIIASGGLRNATDIVKSIIIGADMAAMSGEVLRYLLHGGYEACE 295 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ L+ + + M LLG K ++EL Sbjct: 296 DFLKDLQYKIKIIMCLLGVKNIEELKKVDY 325 >gi|290894504|ref|ZP_06557459.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J2-071] gi|290555939|gb|EFD89498.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J2-071] Length = 358 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 176/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + +G + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L AD L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL +I + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLADAKNISELKTTPLIISGE 339 >gi|260663063|ref|ZP_05863956.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus fermentum 28-3-CHN] gi|260552684|gb|EEX25684.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus fermentum 28-3-CHN] Length = 361 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 182/337 (54%), Gaps = 10/337 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ KD ++ FD LI ALPE++ EV L +P I Sbjct: 6 AQRKNEHLSLAEKDFVLNHQVHPFDQVRLIPNALPEMAVKEVKLKPAGLALPFEWPFYIE 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + +N +LA A+K +AMA GS VMF+D A KSF + R+ P L++ Sbjct: 66 AMTGGSQRTTA-VNASLARLAKKFNLAMATGSMSVMFNDEAAKKSFAVLREENPDGFLMA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA +KA Q ++ + AD L +HLNP QE+I G+ F +A L S Sbjct: 125 NLGA-----GADFKKARQVINFIDADALEIHLNPAQELIMKEGDREFY-WLEALAGLVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +P+++KEVG G+S I + G+R+ ++AG GGT+++RIE R+ E D+ + +W Sbjct: 179 LHIPVIVKEVGFGMSQQTISQLEQIGVRWINVAGTGGTNFARIEDRRNHELDLSDLV-NW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G+ TP SL A+ IASGG+ +D++K+ +LGA G+A FL + + + Sbjct: 238 GLSTPESLLEAQQKSPSTHLIASGGITCPLDVIKAGVLGAKAVGVAGYFLHLLIKEGEEG 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + E M L+G + +LYL L+ + Sbjct: 298 LAKELHRWQVELPRLMTLVGVRNWDDLYLVDYLLSPE 334 >gi|47095967|ref|ZP_00233570.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 1/2a F6854] gi|254827644|ref|ZP_05232331.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N3-165] gi|254829858|ref|ZP_05234513.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 10403S] gi|254898451|ref|ZP_05258375.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes J0161] gi|254912058|ref|ZP_05262070.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes J2818] gi|254936385|ref|ZP_05268082.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes F6900] gi|284801769|ref|YP_003413634.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5578] gi|284994911|ref|YP_003416679.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5923] gi|47015713|gb|EAL06643.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 1/2a F6854] gi|258600023|gb|EEW13348.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N3-165] gi|258608976|gb|EEW21584.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes F6900] gi|284057331|gb|ADB68272.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5578] gi|284060378|gb|ADB71317.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 08-5923] gi|293590025|gb|EFF98359.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes J2818] Length = 358 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 174/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K D LI ++P + ++D + GK + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVS-----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGE 339 >gi|310823056|ref|YP_003955414.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] gi|309396128|gb|ADO73587.1| Isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] Length = 352 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 RK H+++ D +N + L+H A+PE+ ++D S FLGK+L PLL Sbjct: 6 TAKRKDAHLDLCATGDVEPQQNSTLLECVRLVHCAMPELDAGDLDLSTRFLGKRLHCPLL 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I+ MTGG + R+N++LA AE+ +A VGSQR M SF++R AP L+ Sbjct: 66 ITGMTGGTERA-GRVNKDLATLAERYGLAFGVGSQRAMSEAPERAASFQVRDVAPSVALL 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G Q GV + + + ADG+ LHLN QE+ QP G+ +F + + L Sbjct: 125 GNIGLYQAAR-LGVDGVRRLMEAIEADGMALHLNAGQELTQPEGDRDFRGGYAVVEGLVK 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD--LESDIGIVF 238 A LL+KE GCG+ + G+ D++G GGTSW R+E R L +++G F Sbjct: 184 AFGSRLLVKETGCGIGPEVARRLKELGVSNIDVSGLGGTSWVRVEQLRAKGLLAELGAEF 243 Query: 239 QDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 WGIPT ++ R E + +ASGG+R G+D+ K + LGA + G+A P K + Sbjct: 244 SGWGIPTAAAVASVRQAVGPEVRLVASGGIRTGLDVAKVLALGADVAGMALPLFKAQQEG 303 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + A++ + +M L G++ EL + + Sbjct: 304 GLEGAEKALQLILAGLRQAMLLTGSRGCAELRRHPVI 340 >gi|226223984|ref|YP_002758091.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes Clip81459] gi|259491445|sp|C1L2T9|IDI2_LISMC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|225876446|emb|CAS05155.1| Putative isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 358 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 178/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + +G + FPL Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREAAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL +I + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNISELKTTPLIISGE 339 >gi|217964470|ref|YP_002350148.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase)(Isopentenyl pyrophosphate isomerase) [Listeria monocytogenes HCC23] gi|254803426|sp|B8DFU4|IDI2_LISMH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|217333740|gb|ACK39534.1| isopentenyl-diphosphate delta-isomerase (IPP isomerase)(Isopentenyl pyrophosphate isomerase) [Listeria monocytogenes HCC23] gi|307570965|emb|CAR84144.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes L99] Length = 358 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 176/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + +G + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L AD L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLTRIEKYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVATLASVGVQSVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL +I + Sbjct: 300 LTKTIEKLELWKEQLRSLFVLADAKNISELKTTPLIISGE 339 >gi|312190951|gb|ADQ43376.1| type II isopentenyldiphosphate isomerase [Streptomyces cinnamonensis] Length = 363 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DH+ + + FD+ +H AL I +V + F G PL Sbjct: 1 MISQRKDDHVRLAVEHQRQHSGHNQFDEVSFVHHALAGIDRPDVSLATTFAGISWPVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ INR+LAIAA +T VA+A GS F D + +F + R+ P + Sbjct: 61 INAMTGGSV-STGIINRDLAIAARETGVAVASGSMSAYFKDPSCADTFSVLRKENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V K +A+ ++ AD L +H+N QE P G+ +FA +I ++ Sbjct: 120 LANVNATA-----SVDKVQRAIDLVRADALQIHINTAQETPMPEGDRSFASWVPQIEKIA 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 SA++VP+++KEVG GLS + L G++ D+ GRGGT ++RIE+ R + + Sbjct: 175 SAVEVPVIVKEVGNGLSRETVLLIESLGVQVADLGGRGGTDFARIENGRRELGEYAFMH- 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSS 298 WG T L + +ASGG+RN +D+ +++ LGAS G + FL+ + Sbjct: 234 GWGQSTAACLLDNQDV--GIPVLASGGVRNALDVARALALGASGVGASGGFLRTLKDEGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A++A I + + +LG + EL LI + Sbjct: 292 SALIAQISTWLDQLAALQTMLGARTPAELTRCDLLIHGE 330 >gi|282882184|ref|ZP_06290823.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus lacrimalis 315-B] gi|281297949|gb|EFA90406.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus lacrimalis 315-B] Length = 341 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 190/340 (55%), Gaps = 12/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK +HI + + FDD L H +LPE+ F E++ S FL KK++FPL+ Sbjct: 1 MRKFRKREHIENYLRSTYV--GNPLFDDMFLYHNSLPEVDFSEINTSTVFLNKKVNFPLM 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG++ E INR LA A + + +AVGSQ + D + ++SF + R+ ++ Sbjct: 59 INAMTGGSD-FAEDINRQLAQVANEFNIPIAVGSQTIALEDPDTVESFSVVREIVEKGIV 117 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I NL A ++ A +A+ ++ AD L LHLNP QE+ G F ++ I L Sbjct: 118 IGNLSART-----SLEDAKKAIDIIRADSLQLHLNPAQELAMSEGEREFKNILKNIEELV 172 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG GLSS ++ G+R D++G GGT++ IE+ R +SD+ ++ Sbjct: 173 NGLDVPIIVKEVGFGLSSDVVKRLYDIGVRNVDVSGFGGTNFFEIENLRTPDSDLSELY- 231 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT L++ A+ ++ + I SGG++N ++KSI+ GA + ++ L + Sbjct: 232 GWGIPTALAIIEAKSLGLDDLKIIGSGGIKNSEQLIKSIVAGADMTAISGEILSYLVHGG 291 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + +L + + M LLG K +++L ++ + Sbjct: 292 VEYTLKYLGNLIYKSKMIMLLLGAKDIKDLRNVKYKVKGE 331 >gi|46907611|ref|YP_014000.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes serotype 4b str. F2365] gi|254824557|ref|ZP_05229558.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J1-194] gi|254852570|ref|ZP_05241918.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL R2-503] gi|254932568|ref|ZP_05265927.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes HPB2262] gi|254994362|ref|ZP_05276552.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J2-064] gi|255521770|ref|ZP_05389007.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J1-175] gi|300766403|ref|ZP_07076360.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N1-017] gi|67460883|sp|Q71ZT7|IDI2_LISMF RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|46880879|gb|AAT04177.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes serotype 4b str. F2365] gi|258605882|gb|EEW18490.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL R2-503] gi|293584127|gb|EFF96159.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes HPB2262] gi|293593796|gb|EFG01557.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL J1-194] gi|300512907|gb|EFK39997.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes FSL N1-017] gi|328466769|gb|EGF37887.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes 1816] gi|332311824|gb|EGJ24919.1| Isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. Scott A] Length = 358 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 178/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + +G + FPL Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL +I + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNISELKTTPLIISGE 339 >gi|89099122|ref|ZP_01172001.1| isopentenyl pyrophosphate isomerase [Bacillus sp. NRRL B-14911] gi|89086252|gb|EAR65374.1| isopentenyl pyrophosphate isomerase [Bacillus sp. NRRL B-14911] Length = 351 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 175/337 (51%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI + FDD IH++LP+ + D+V E G LS P+LI+ Sbjct: 4 SKRKWDHIEFALSTG--QKRIAGFDDIDFIHQSLPDSAVDQVKIETEIGGLTLSSPILIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG + +IN+ LA+AA +T +AMAVGSQ D +S++ +RQ P ++I Sbjct: 62 AMTGGGGEKTLKINQELAMAAAETGLAMAVGSQMAALKDPAERESYKIVRQENPKGIVIG 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A +A+ ++ A+ L +HLN +QE+ P G+ +F D +I + Sbjct: 122 NLGS-----EADAEQAKRAIEMIEANALQIHLNVVQELTMPEGDRDFRDALRRIESICKN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G S +G+ D+ G GGT+++RIE+ R + F W Sbjct: 177 VHVPVIVKEVGFGTSRESAAKLAAAGVSAIDVGGFGGTNFARIENERR--ERLLSFFNGW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GIPT S+ + I SGG++ D K+I GA +A LK M + Sbjct: 235 GIPTATSILEVKAEETGVSIIGSGGIQTAFDAAKTIACGADAAAMAGYLLKILMSEGHVQ 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I +L +E M LG + +++L +I + Sbjct: 295 LIKEIHTLHEELAFIMAALGAETIKDLQRAPFIISGK 331 >gi|300814223|ref|ZP_07094499.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511647|gb|EFK38871.1| isopentenyl-diphosphate delta-isomerase, type 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 341 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 190/340 (55%), Gaps = 12/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK +HI + + FDD L H +LPE+ F E++ S FL KK++FPL+ Sbjct: 1 MRKFRKREHIENYLRSTYV--GNPLFDDMFLYHNSLPEVDFSEINTSTVFLNKKVNFPLM 58 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG++ E INR LA A + + +AVGSQ + D + ++SF + R+ ++ Sbjct: 59 INAMTGGSD-FAEDINRQLAQVANEFNIPIAVGSQTIALEDPDTVESFSVVREIVEKGIV 117 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I NL A ++ A +A+ ++ AD L LHLNP QE+ G F ++ I L Sbjct: 118 IGNLSARA-----SLEDAKKAIDIIRADSLQLHLNPAQELAMSEGEREFKNILKNIEELV 172 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +DVP+++KEVG GLSS ++ G+R D++G GGT++ IE+ R +SD+ ++ Sbjct: 173 NGLDVPIIVKEVGFGLSSDVVKRLYDIGVRNVDVSGFGGTNFFEIENLRTPDSDLSELY- 231 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 WGIPT L++ A+ ++ + I SGG++N ++KSI+ GA + ++ L + Sbjct: 232 GWGIPTALAIIEAKSLGLDDLKIIGSGGIKNSEQLIKSIVAGADMTAISGEILSYLVHGG 291 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + +L + + M LLG K +++L ++ + Sbjct: 292 VEYTLKYLGNLIYKSKMIMLLLGAKDIKDLRNVKYKVKGE 331 >gi|224499959|ref|ZP_03668308.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes Finland 1988] Length = 358 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 174/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K D LI ++P + ++D + GK + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVS-----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGE 339 >gi|52842268|ref|YP_096067.1| isopentenyl pyrophosphate isomerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377135|sp|Q5ZTV7|IDI2_LEGPH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|52629379|gb|AAU28120.1| isopentenyl-diphosphate delta-isomerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 342 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 116/333 (34%), Positives = 165/333 (49%), Gaps = 7/333 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ K + P +IS Sbjct: 9 EQRKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 SMT G++ +E IN L A KTK AM VGSQR +D A + LR+ P L S Sbjct: 69 SMTAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQAAFEWTPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL D + + + L A+ L +H NPLQE IQP G TNF + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQAEALIIHCNPLQECIQPEGTTNFQGCWTALEALVKK 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + P+++KE GCG S + G+ +I+G GGT W RIE HR + I Sbjct: 187 IASPVIIKETGCGFSKNTLLRLNNIGVAAVEISGVGGTHWGRIEGHRANKDPIRQRTADT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T S A + SGG+RNG+D K LGA+ G A P L+ A+ S Sbjct: 247 FRNWGIDTLQSTRNAISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALGS 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V+ + ++ E +MF G++ + +L Sbjct: 307 TGQVLTQMNTIEYELKTAMFCTGSRVLDDLKEK 339 >gi|238623520|emb|CAX48659.1| putative type II isopentenyl diphosphate delta isomerase [Streptomyces anulatus] Length = 363 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 178/338 (52%), Gaps = 11/338 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M++ RK DH+ + + + FD+ +H AL I +V + F G PL Sbjct: 1 MISQRKDDHVRLAVEQQQALDGRNQFDEVSFVHHALAGIDRPDVSLATTFAGIAWQVPLY 60 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ INR+LAIAA +T V +A GS F D + +F + RQ P + Sbjct: 61 INAMTGGSTH-TGAINRDLAIAARETGVPIASGSMSAYFKDPSCADTFRVLRQENPDGFV 119 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A V KA +A+ +L AD L +H+N +QE + P G+ +F+ +I ++ Sbjct: 120 MANINATA-----SVDKARRAIGLLEADALQIHINTVQETVMPEGDRSFSSWVPQIERIT 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+DVP+++KEVG GLS + G+R D+ GRGGT ++RIE+ R +D Sbjct: 175 AAVDVPVIVKEVGFGLSRETVLTLRNLGVRVADLGGRGGTDFARIENGRRELADYA-YLH 233 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WG+ T L AR +ASGG+R+ +D+++++ LGAS G++ FL+ MD Sbjct: 234 GWGLSTAACLLDARD--PGIPVLASGGVRHPLDVVRALALGASGVGVSGGFLRTLMDGGV 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+VA I + + +LG++ L I Sbjct: 292 TALVAQISTWLDQLGALQTMLGSRTPAGLTGCDLQIHG 329 >gi|16803423|ref|NP_464908.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes EGD-e] gi|224501673|ref|ZP_03669980.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL R2-561] gi|20978477|sp|Q8Y7A5|IDI2_LISMO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|16410799|emb|CAC99461.1| lmo1383 [Listeria monocytogenes EGD-e] Length = 358 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 174/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K D LI ++P + ++D + GK + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I ++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVS-----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGE 339 >gi|184155671|ref|YP_001844011.1| isopentenyl pyrophosphate isomerase [Lactobacillus fermentum IFO 3956] gi|227514849|ref|ZP_03944898.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum ATCC 14931] gi|183227015|dbj|BAG27531.1| isopentenyl diphosphate delta-isomerase [Lactobacillus fermentum IFO 3956] gi|227086781|gb|EEI22093.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum ATCC 14931] Length = 361 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 182/337 (54%), Gaps = 10/337 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ KD ++ FD LI ALPE++ EV L +P I Sbjct: 6 AQRKNEHLSLAEKDFALNHQVHPFDQVRLIPNALPEMAVKEVKLKPAGLALPFEWPFYIE 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + +N +LA A++ +AMA GS VMF+D A +SF + R+ P L++ Sbjct: 66 AMTGGSQRTTA-VNASLARLAKQFNLAMATGSMSVMFNDEAAKESFAVLREENPDGFLMA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA +KA Q ++ + AD L +HLNP QE+I G+ F +A L S Sbjct: 125 NLGA-----GADFKKARQVINFIDADALEIHLNPAQELIMKEGDREFY-WLEALAGLVSR 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +P+++KEVG G+S I + G+R+ ++AG GGT+++RIE R+ E D+ + +W Sbjct: 179 LHIPVIVKEVGFGMSQQTISQLEQIGVRWINVAGTGGTNFARIEDRRNHELDLSDLV-NW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G+ TP SL A+ IASGG+ +D++K+ +LGA G+A FL + + + Sbjct: 238 GLSTPESLLEAQQKSPSTHLIASGGITCPLDVIKAGVLGAKAVGVAGYFLHLLIKEGEEG 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + E M L+G + +LYL L+ + Sbjct: 298 LAKELHRWQVELPRLMTLVGVRNWDDLYLVDYLLSPE 334 >gi|116872815|ref|YP_849596.1| isopentenyl pyrophosphate isomerase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466260|sp|A0AII5|IDI2_LISW6 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116741693|emb|CAK20817.1| isopentenyl-diphosphate delta-isomerase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 358 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 91/340 (26%), Positives = 176/340 (51%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K DD LI ++P + ++D + G +S P Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LDDIQLIGTSIPRYNVKDIDLTTTIFGVNVSLPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN +LA A + + MAVGSQ + + + +++ +R+ P ++ Sbjct: 67 INAMTGGS-RHTKKINADLAEIAREVAIPMAVGSQSAALKNSSLMDTYQIVREVNPSGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + VQ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 MANVS-----PEVAVQDGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLARIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KRSPVPIIVKEVGFGMTRETVKTLREVGVETVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T SL + + ++ASGG+RN +DI+KS+ LGA G+A + D Sbjct: 240 DWGISTGQSLIDMQHIDAPKIAYLASGGIRNPLDIVKSLALGADSVGMAGQIIYSLKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL + ++ + Sbjct: 300 VSNTIEKLELWKEQLRGLFVLADAKNIAELKETSLIVNGK 339 >gi|308174079|ref|YP_003920784.1| Fni [Bacillus amyloliquefaciens DSM 7] gi|307606943|emb|CBI43314.1| Fni [Bacillus amyloliquefaciens DSM 7] gi|328552794|gb|AEB23286.1| isopentenyl pyrophosphate isomerase [Bacillus amyloliquefaciens TA208] gi|328912408|gb|AEB64004.1| Isopentenyl-diphosphate delta-isomerase [Bacillus amyloliquefaciens LL3] Length = 349 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 178/336 (52%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK +HIN + DD +H +LP+++ ++VD S E G S P+ I+ Sbjct: 4 AERKREHINHALSTG--QNRETGLDDITFVHVSLPDLALEKVDISTEIGGLTSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG ++ INR+LA AA K + +AVGSQ D + S+E +R+ P+ ++ + Sbjct: 62 AMTGGGGQLTYEINRSLARAARKAGMPLAVGSQMSALKDPSERYSYEIVRKENPNGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A +AV ++ AD L +HLN +QEI+ P G+ +F +I + Sbjct: 122 NLGS-----EADAEQAKRAVDMIEADALQIHLNVIQEIVMPEGDRSFTGALRRIEQIVDE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+ +KEVG G+S +G D G GGT++S+IE+ R ++ F W Sbjct: 177 AGVPVFVKEVGFGMSRESARQLFDAGAAAVDAGGYGGTNFSKIENMRREKA--LQFFNTW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T SL + IASGGL++ +D+ K+I LGAS G+A FLK + Sbjct: 235 GISTAASLAEIHSLSVDQSIIASGGLQSALDVAKTIALGASSAGMAGIFLKALTSKGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + +L +E + M +LG + V +L +I+ Sbjct: 295 LFDEMTALLEELKMIMTVLGCQSVAQLQKAPLVIKG 330 >gi|118431581|ref|NP_148153.2| isopentenyl pyrophosphate isomerase [Aeropyrum pernix K1] gi|152031624|sp|Q9YB30|IDI2_AERPE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116062906|dbj|BAA80768.2| isopentenyl-diphosphate delta-isomerase [Aeropyrum pernix K1] Length = 375 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 191/339 (56%), Gaps = 7/339 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK++H+ ++ R + ++H PE++ +V ++F G +L PL+I Sbjct: 5 TSARKLEHLKMIVSSKVESRESTLLEYVRIVHNPTPEVNLGDVSLEIDFCGGRLRAPLVI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 + MTGG+ + E INR LA AE+ +A+ VGSQR D + ++F R+ AP+ LI Sbjct: 65 TGMTGGHPDV-EWINRELASVAEELGIAIGVGSQRAAIEDPSLARTFRAAREAAPNAFLI 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA QL+ + V++ AV ++ AD + +HLNP QE QP G+ + + KIA + Sbjct: 124 ANLGAPQLSLGYSVREVRMAVEMIDADAIAIHLNPGQEAYQPEGDPFYRGVVGKIAEAAE 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----DIGI 236 A VP+++KE G GLS + G+R FD+AG GGT+W +IE R ++ + G Sbjct: 184 AAGVPVIVKETGNGLSREAVAQLRALGVRCFDVAGLGGTNWIKIEVLRGRKAGSPLEAGP 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 + WG PT +L AR +A IASGG+RNG+D ++I LGA G+A P ++ + Sbjct: 244 LQDFWGNPTAAALMEARTAAPDAYIIASGGVRNGLDAARAIALGADAAGVALPAIRSLLS 303 Query: 297 SS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + ++++ + +++++G RV+ L+ ++ Sbjct: 304 GGRQATLKLLKAIEYQLKTAVYMVGETRVRGLWRAPIVV 342 >gi|28378413|ref|NP_785305.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum WCFS1] gi|254556622|ref|YP_003063039.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum JDM1] gi|32129622|sp|Q88WB6|IDI2_LACPL RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|28271249|emb|CAD64153.1| isopentenyl diphosphate delta-isomerase [Lactobacillus plantarum WCFS1] gi|254045549|gb|ACT62342.1| isopentenyl pyrophosphate isomerase [Lactobacillus plantarum JDM1] Length = 348 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 103/331 (31%), Positives = 170/331 (51%), Gaps = 11/331 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+++ K ++ FD + H ALPE + +VD + PL I Sbjct: 7 SHRKDEHVSLAEKYFHGEQ-ANAFDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIE 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + E IN L A + +A GSQ V D +F +R + P+ ++ Sbjct: 66 AMTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKDPQVAPTFATMRDHNPNGLIFG 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA + A A+ +L AD L LHLN +QEI+ P G+ +F + I+ L A Sbjct: 125 NLGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFH-WLTNISDLVQA 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+ Sbjct: 179 LTVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMA-YLHDF 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G+ T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D Sbjct: 238 GLTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDE 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 V+A + + + L+G RV + + Sbjct: 298 VIAMLTDWQSQLKRLFALVGVTRVDQFKSSR 328 >gi|300767356|ref|ZP_07077268.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495175|gb|EFK30331.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 369 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 103/331 (31%), Positives = 170/331 (51%), Gaps = 11/331 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+++ K ++ FD + H ALPE + +VD + PL I Sbjct: 28 SHRKDEHVSLAEKYFHGEQ-ANAFDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIE 86 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + E IN L A + +A GSQ V D +F +R + P+ ++ Sbjct: 87 AMTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKDPQVAPTFATMRDHNPNGLIFG 145 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA + A A+ +L AD L LHLN +QEI+ P G+ +F + I+ L A Sbjct: 146 NLGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFH-WLTNISDLVQA 199 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+ Sbjct: 200 LTVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMA-YLHDF 258 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G+ T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D Sbjct: 259 GLTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDE 318 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 V+A + + + L+G RV + + Sbjct: 319 VIAMLTDWQSQLKRLFALVGVTRVDQFKSSR 349 >gi|116333507|ref|YP_795034.1| isopentenyl pyrophosphate isomerase [Lactobacillus brevis ATCC 367] gi|122269806|sp|Q03S19|IDI2_LACBA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116098854|gb|ABJ64003.1| Isopentenyl diphosphate isomerase [Lactobacillus brevis ATCC 367] Length = 345 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 173/335 (51%), Gaps = 12/335 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ K FD +H++LPEIS +VD S + L PL+I +M Sbjct: 9 RKDEHLSLAEKFYTPTA-TSQFDQLRFVHQSLPEISLTDVDFSTQLGPLSLKVPLMIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNL 123 TGG+ + +N L A T +A+A GSQ + D AI +F LR+ P ++ +N+ Sbjct: 68 TGGSPR-TGVVNAQLGRIAAATGMAVASGSQSIALKDEQAIPTFTSLRENNPDGLVFANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA V+ A AV +L A+ L +H+N QE++ P G+ +F I + +A+D Sbjct: 127 GA-----GHDVRAAKHAVQMLAANALEIHVNTAQELVMPEGDRDFH-WLDHIGNIVAALD 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ ++ G++ D+ GRGGT++ IE+ R + ++ WG Sbjct: 181 VPVIVKEVGFGMAQETLQKLQHVGVKLVDLGGRGGTNFVDIENFRRHQKELN-YLDTWGQ 239 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 T SL AR + Q IA+GG+R +D K++ LGA + G A L + + +A Sbjct: 240 STVESLFEARQ-QPDLQVIATGGIRQPLDAAKALALGARVVGSAGQILHSLIKTDEATTT 298 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + + M LLGT + +L L+ + Sbjct: 299 AMLLDWQVGLRTIMTLLGTTDLTQLRQQRLLLSPE 333 >gi|13541010|ref|NP_110698.1| isopentenyl pyrophosphate isomerase [Thermoplasma volcanium GSS1] gi|20978497|sp|Q97CC2|IDI2_THEVO RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|14324394|dbj|BAB59322.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 347 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 190/344 (55%), Gaps = 17/344 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ + ++DD +L+H A PE+++D++D V+FLGK L FP++ Sbjct: 1 MIEKRKEEHIRIA-ENENVSAFHNYWDDVYLMHEADPEVNYDDIDTGVDFLGKHLGFPMV 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + ++IN NLA AEK ++AM VGS R + + ++ + + I Sbjct: 60 ISSMTGGAE-IAKKINYNLATVAEKYQLAMGVGSMRAAIVNRSLSDTYSVINERNVPIKI 118 Query: 121 SNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +N+GA QL + ++ AD L +H N LQE++QP G+ N + +I Sbjct: 119 ANIGAPQLVPQGKEAIDEKDIAYIYDLIKADFLAVHFNFLQEMVQPEGDRNAEGVIKRIK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES---- 232 LS + + ++ KE G G S + +G++ +++G GT+++ +E +R Sbjct: 179 ELSGSFN--IIAKETGSGFSKATAQRLADAGVKAIEVSGLSGTTFAAVEYYRAKNEGNAE 236 Query: 233 --DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IG F +WGIP+P S+ I SGGLRNG+D+ K+I LGASLGG A Sbjct: 237 KMRIGETFWNWGIPSPASVYYCSDV---LPVIGSGGLRNGLDLAKAISLGASLGGFARTL 293 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 LK A S +AV +E + +EF V+MFL G K V EL +I Sbjct: 294 LKDADQSVEAVSRNVEMIEREFKVAMFLTGNKNVYELRKTKKVI 337 >gi|16081270|ref|NP_393580.1| isopentenyl pyrophosphate isomerase [Thermoplasma acidophilum DSM 1728] gi|13878556|sp|Q9HLX2|IDI2_THEAC RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|10639248|emb|CAC11250.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 348 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 194/344 (56%), Gaps = 17/344 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ RK +HI I ++ + F+DD L+H A PE+++DE+D SV+FLGKKL FP++ Sbjct: 1 MIGKRKEEHIRIA-ENEDVSSFHNFWDDISLMHEADPEVNYDEIDTSVDFLGKKLKFPMI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG + + INRNLA+AAE+ + M VGS R D + ++ + + + I Sbjct: 60 ISSMTGGAE-IAKNINRNLAVAAERFGIGMGVGSMRAAIVDRSIEDTYSVINESHVPLKI 118 Query: 121 SNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +N+GA QL + ++ AD L +H N LQE++QP G+ N + +I Sbjct: 119 ANIGAPQLVRQDKDAVSNRDIAYIYDLIKADFLAVHFNFLQEMVQPEGDRNSKGVIDRIK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD--- 233 LS + + ++ KE G G S E + +G++ +++G GT+++ +E +R + + Sbjct: 179 DLSGSFN--IIAKETGSGFSRRTAERLIDAGVKAIEVSGVSGTTFAAVEYYRARKENNLE 236 Query: 234 ---IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IG F +WGIP+P S+ I SGGLRNG+D+ K+I +GA+ GG A Sbjct: 237 KMRIGETFWNWGIPSPASVYYCSDLA---PVIGSGGLRNGLDLAKAIAMGATAGGFARSL 293 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 LK A + ++ IE +++EF V++FL G K V EL +I Sbjct: 294 LKDADTDPEMLMKNIELIQREFRVALFLTGNKNVYELKFTKKVI 337 >gi|169630323|ref|YP_001703972.1| isopentenyl pyrophosphate isomerase [Mycobacterium abscessus ATCC 19977] gi|169242290|emb|CAM63318.1| Isopentenyl-diphosphate delta-isomerase [Mycobacterium abscessus] Length = 322 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 116/309 (37%), Positives = 169/309 (54%), Gaps = 1/309 (0%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 + L + ALP S VD S EFLG++L+ P+LI +MTGG K+ INRNLA Sbjct: 5 TRTTGLERLDLPYMALPNSSLAGVDLSTEFLGRRLAAPVLIGAMTGGA-KLAATINRNLA 63 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 AA++ + M +GSQRVM + ++ +F +R+ AP +LI N+G QL + + Sbjct: 64 AAAQELGIGMMLGSQRVMLVEPDSADTFAVREVAPDILLIGNIGLAQLGNIAPAAQLNSL 123 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 V +GAD L +H NPLQE +QP G+T+F ++A L+ A++ P+LLKEVG G+S Sbjct: 124 VRRVGADALAVHTNPLQEAVQPGGDTDFTGQVYRLAELTHAVEFPVLLKEVGHGISGAAA 183 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + D+AG GGTSW+R+E + +WGIPT +L Sbjct: 184 RRLGGCRLAAIDVAGAGGTSWARVEQFVRFGAITSPELAEWGIPTAEALVEVHAELPHMP 243 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 I SGG+R G+D K+I LGAS+ +A P L PA+ S AVVA ++ E ++M Sbjct: 244 LIGSGGIRTGMDAAKAIALGASVVSVALPLLAPAVQSPQAVVAWLQQFLDELRIAMHCAD 303 Query: 321 TKRVQELYL 329 + +L Sbjct: 304 VSTIADLRR 312 >gi|332799295|ref|YP_004460794.1| Isopentenyl-diphosphate delta-isomerase [Tepidanaerobacter sp. Re1] gi|332697030|gb|AEE91487.1| Isopentenyl-diphosphate delta-isomerase [Tepidanaerobacter sp. Re1] Length = 348 Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats. Identities = 116/336 (34%), Positives = 185/336 (55%), Gaps = 11/336 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + + FDD ++H L EI+ +++D S KL+ P++I++M Sbjct: 9 RKKEHIKYSMLLEK-NLKRNAFDDIKILHNCLSEININDIDLSTNLQSIKLTSPIIINAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG K INR LA A+K +AMAVGSQ + + N+I SF++ R+ P ++ +NL Sbjct: 68 TGGI-KEGRTINRELAKIAKKLGLAMAVGSQTIALKNPNSIASFQITREINPDGIIFANL 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 A D +++A+QA+ ++ AD L +HLN QE++ G NF + IA + ++ Sbjct: 127 SA-----DSTLKEANQAIEMINADALQIHLNVPQEVMMKEGRKNFTGIVDNIAEIVDNIN 181 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++KEVG G++ + + K+G++ DI G GGT++ IE+ R QDWGI Sbjct: 182 IPVIVKEVGFGIAKEEAIILAKNGVKIIDIGGSGGTNFIAIENARSKSKAF-RHLQDWGI 240 Query: 244 PTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 PTP+SL ++ I+SGGL+NG+D KS+ LGA A FL + A+ Sbjct: 241 PTPISLIEVIDAVGDKVDTISSGGLKNGLDAAKSLALGAKATAFAGYFLYILLKKGPSAL 300 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 I + KE M ++GTK +EL +I+ + Sbjct: 301 EKYILQIEKEIKYVMAMVGTKNFEELQQRPVIIQGK 336 >gi|299822975|ref|ZP_07054861.1| isopentenyl-diphosphate delta-isomerase [Listeria grayi DSM 20601] gi|299816504|gb|EFI83742.1| isopentenyl-diphosphate delta-isomerase [Listeria grayi DSM 20601] Length = 347 Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 175/336 (52%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + K F + +I ++P+ + ++D S + FPL I+ Sbjct: 10 ERRKDEHVTLALKQNQELAGDT-FKEIEVIGMSVPKYDYADIDLSTTIADIAIPFPLYIN 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ + + IN NLA A T + MAVGSQ + +F++ R+ P+ VL + Sbjct: 69 AMTGGS-RHTKEINGNLAEIAAATGIPMAVGSQSSALKNAELADTFQIARKRNPNGVLFA 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + V +AV ++ A+ L +H+NP+QE++ G+ NFA I Sbjct: 128 NVS-----PEIKVADGLRAVEMIEANALQIHINPVQELVMKEGDRNFAHWLKSIETYQKE 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +P+++KEVG G++ EL + G++ D+ G+GGT+++ IE+ R + DW Sbjct: 183 LSIPIIVKEVGFGITRETAELLKRIGVKTIDVGGKGGTNFAAIENDRRRDHAYD-YLTDW 241 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDA 300 GI TP SL + + F+ASGG++N +D+LKS+ILGA+ G++ P LK + Sbjct: 242 GITTPQSLLDCQ-LVTDVDFLASGGVKNPLDMLKSLILGANAVGMSGPLLLKLKEHGVEK 300 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A IE+ +++ L K +QE+ + Sbjct: 301 TIAQIEAWKEQLTSLFLLANAKDIQEVRQTPIALYG 336 >gi|90961659|ref|YP_535575.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius UCC118] gi|227890747|ref|ZP_04008552.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius ATCC 11741] gi|90820853|gb|ABD99492.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus salivarius UCC118] gi|227867685|gb|EEJ75106.1| isopentenyl pyrophosphate isomerase [Lactobacillus salivarius ATCC 11741] gi|300214464|gb|ADJ78880.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus salivarius CECT 5713] Length = 348 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 180/337 (53%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ K D+ LI+ LPE++ ++D +GK + P I+ Sbjct: 5 QHRKNEHLSLAEKFFKTQS-SNQLDEVQLIYSNLPELNLSDIDIRSTLVGKDIPVPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 ++TGG+++ + IN L+ A KT + MA GSQ + + +F +RQ P+ L+ Sbjct: 64 AITGGSSQ-TDDINYKLSTVAAKTNIPMACGSQSIALKYPSLSPNFSKIRQLNPNGFLLG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA +F V A ++ A+ + LHLN QE++ P G+T F I + + Sbjct: 123 NLGAGHSYSNFNV-----AQQMIDANAMELHLNVSQELVMPEGDTEFV-WKDNIREIVNN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PLL+K VG GL+ M I+ G++Y D++G+GGT++ IE+ R + ++ QD Sbjct: 177 SSFPLLVKGVGQGLTPMTIKELADIGVKYIDLSGKGGTNFIEIENRRRKQKELAF-LQDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G+ T SL A+ + F ASGG+RN +DI+K ++LGA G++ FL + +++ Sbjct: 236 GMTTAQSLVAAKLVDEDISFTASGGIRNSLDIVKCLVLGADNVGISGLFLHILLRQGTES 295 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I +L+ E M +LG K + +L+ ++ + Sbjct: 296 LIEYITNLKIEIKKIMLMLGCKNIDDLHKLPVILSSE 332 >gi|297617650|ref|YP_003702809.1| isopentenyl-diphosphate delta-isomerase, type 2 [Syntrophothermus lipocalidus DSM 12680] gi|297145487|gb|ADI02244.1| isopentenyl-diphosphate delta-isomerase, type 2 [Syntrophothermus lipocalidus DSM 12680] Length = 349 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 179/336 (53%), Gaps = 11/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK++H+ + + P + F+D L+H A+PE+ ++++ EFLG++L PLL Sbjct: 1 MRTRRKLEHLRLALELP-LGPGATGFEDVFLVHNAVPELELNQIELGTEFLGRRLQAPLL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++M+GG N+ + IN +LA+ A + + MAVGSQ + + ++SF++ RQ P ++ Sbjct: 60 INAMSGGINEARD-INESLAMLAAEYGLGMAVGSQIIGVEEDACLESFQVVRQVNPGGLV 118 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ A+ V A +AV ++ ADGL +HLN QE+ G+ F + I L Sbjct: 119 LANVSALAK-----VSVAMRAVEMVEADGLQVHLNVPQELAMAEGDRKFEGVLDNIHELV 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + VP+++KEVG G+S + + G++Y DI G GGT++ IE+ R D + Sbjct: 174 ERLPVPVIVKEVGFGMSREVADKLISVGVKYLDIGGHGGTNFIAIENERGGLFDEEMAL- 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 WGIPT +SL E + IA+GG+ + + K++ LGA L G+A LK Sbjct: 233 -WGIPTAVSLIEVLSLNREVKVIATGGISSPLRAAKALGLGADLVGVAGILLKVLQGGGR 291 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + +++ + G + EL +I Sbjct: 292 EKLSRWMDTYLYRLKAICLMTGARTPFELRRQPIVI 327 >gi|255027073|ref|ZP_05299059.1| isopentenyl pyrophosphate isomerase [Listeria monocytogenes FSL J2-003] Length = 358 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 173/340 (50%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K D LI ++P + ++D + GK + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + I ++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAATKKRSLIDTYNIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q QA+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANVS-----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + + Sbjct: 240 DWGISTGQALIDMQHSDAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKKEG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E +++ L K + EL ++ + Sbjct: 300 VTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGE 339 >gi|308180568|ref|YP_003924696.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046059|gb|ADN98602.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 348 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 102/331 (30%), Positives = 169/331 (51%), Gaps = 11/331 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+++ K ++ FD + H ALPE + +VD + PL I Sbjct: 7 SHRKDEHVSLAEKYFHGEQ-ANAFDQVRIRHDALPETAVADVDLATTVGQWHWDSPLYIE 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + E IN L A + +A GSQ V +F +R + P+ ++ Sbjct: 66 AMTGGSQRTGE-INARLGRIAAACGLPIATGSQSVAIKHPQVAPTFATMRDHNPNGLIFG 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA + A A+ +L AD L LHLN +QEI+ P G+ +F + I+ L A Sbjct: 125 NLGA-----GHPLSAAQTAIAMLQADALELHLNVVQEIVMPEGDRDFH-WLTNISDLVQA 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S ++ +G+RY D+ G GGT++ IE+ R D+ D+ Sbjct: 179 LTVPVIVKEVGFGISRPTMQQLYAAGVRYLDLGGHGGTNFVDIENRRRANRDMA-YLHDF 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G+ T SL + ++ +A+GG+R +DILK+++LGA G+A L + + D Sbjct: 238 GLTTVESLLGVQNRPDDLTVLAAGGVRQPLDILKALMLGADAVGMAGTVLHALLHHTDDE 297 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 V+A + + + L+G RV + + Sbjct: 298 VIAMLTDWQSQLKRLFALVGVTRVDQFKSSR 328 >gi|257076371|ref|ZP_05570732.1| isopentenyl pyrophosphate isomerase [Ferroplasma acidarmanus fer1] Length = 349 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 188/344 (54%), Gaps = 17/344 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M+ +RK +HINI ++ + F+DD LIHRA+PE+ +D ++ + FLG + P L Sbjct: 1 MIENRKEEHINIA-ENMNVTSEHNFWDDIRLIHRAIPEVDYDSINTKINFLGTEFGLPFL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG K +IN NLA AAE+ K+ M VGS R + N +F + Sbjct: 60 ISSMTGGTEKA-RKINENLARAAEEFKIGMGVGSMRAAIENKNIADTFSVINNYKIPARF 118 Query: 121 SNLGAVQL----NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +N+GA QL + +++GA L +H N LQE++QP G+ N + S++ Sbjct: 119 ANIGAPQLIGQEKPPISDKDIEYIFNLIGAKYLIVHFNFLQEMVQPEGDKNARGVMSRLK 178 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE----- 231 ++ + P++ KE G G S D +G++ D+ G GGTS++ IE +R + Sbjct: 179 EIAKS--YPVIAKETGSGFSRDDALELKDAGVKAIDVGGLGGTSFAAIEYYRAEKIQNKE 236 Query: 232 -SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G F +WG+P+P S++ I SGG+RNG D++KSII+GA +G +A F Sbjct: 237 KMHTGQTFWNWGVPSPASIKFC---SVGLPIIGSGGIRNGQDVVKSIIMGADMGAMARNF 293 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 LK A S + +V I+++ K+ +SMFL +K V EL ++ Sbjct: 294 LKDADTSYEDLVFHIKNIIKDIKISMFLTASKDVSELKNKRYIV 337 >gi|301300763|ref|ZP_07206947.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851613|gb|EFK79313.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 348 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 181/337 (53%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ K D+ LI+ LPE++ ++D +GK + P I+ Sbjct: 5 QHRKNEHLSLAEKFFKTQS-SNQLDEVQLIYSNLPELNLSDIDIRSTLVGKDIPVPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 ++TGG+++ + IN L+ A KT + MA GSQ + + +F +RQ P+ L+ Sbjct: 64 AITGGSSQ-TDDINYKLSTVAAKTNIPMACGSQSIALKYPSLSPNFSKIRQLNPNGFLLG 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA +F V A ++ A+ + LHLN QE++ P G+T F I + ++ Sbjct: 123 NLGAGHSYSNFNV-----AQQMIDANAMELHLNVSQELVMPEGDTEF-MWKDNIREIVNS 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 PLL+K VG GL+ M I+ G++Y D++G+GGT++ IE+ R + ++ QD Sbjct: 177 SSFPLLVKGVGQGLTPMTIKELADIGVKYIDLSGKGGTNFIEIENRRRKQKELAF-LQDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G+ T SL A+ + F ASGG++N +DI+K ++LGA G++ FL + +++ Sbjct: 236 GMTTAQSLVAAKLVDEDISFTASGGIKNSLDIVKCLVLGADNVGISGLFLHILLRQGTES 295 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ I +L+ E M +LG K + +L+ ++ + Sbjct: 296 LIEYITNLKIEIKKIMLMLGCKNIDDLHKLPVILSSE 332 >gi|297621342|ref|YP_003709479.1| isopentenyl-diphosphate delta-isomerase [Waddlia chondrophila WSU 86-1044] gi|297376643|gb|ADI38473.1| isopentenyl-diphosphate delta-isomerase [Waddlia chondrophila WSU 86-1044] Length = 355 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 191/334 (57%), Gaps = 6/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + RK H++ P FF+D +HRA+PE++F E+D S+EFL KK+SFPL I Sbjct: 9 IPSRKQRHLDACMNQPVEGVGSTFFEDVMFVHRAMPELNFSEIDTSIEFLDKKISFPLFI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 S MTGG+++ NR LA AA++ + + +GS RV+F+ + F LR+YAP +I+ Sbjct: 69 SCMTGGSDQ-GRLANRELAKAAQELNIPIGLGSIRVLFNHPERVDDFLLREYAPDIPIIA 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+ + + + + ++ L D L +HLN QE+ Q G+T F + I Sbjct: 128 NIGGAQI-IELSMHEIREWLNKLEVDALTIHLNCGQELFQNGGDTRFRGIMDAIEKTIDN 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG-IVFQD 240 + +P+++KE G G+S +++ + G Y D+AG GGT+W +E H + D F D Sbjct: 187 LSIPVIVKETGFGISPKEVKKLIAMGTHYVDLAGAGGTNWITVEQHINQTEDFASSAFMD 246 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 WG PT + L+ + Y + ++SGGLR+G+D+ KSI LGA GG+A PF++ ++D + Sbjct: 247 WGTPTAILLDTVKKYRGK--ILSSGGLRSGMDLAKSIALGAHAGGMALPFIQASIDGGKE 304 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 V ++ K +M L G++ +++L + Sbjct: 305 EAVVLGRTIEKVLKSTMLLTGSQTIEDLQQQPLI 338 >gi|296171200|ref|ZP_06852627.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894266|gb|EFG74022.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 366 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 174/335 (51%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVC-KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ + + D + L + AL + S ++D S +F G +L P+L Sbjct: 26 MTTRKRRHIDVCLGEQVNYEHLSTGLDRYQLPYNALTQTSLGDIDLSTQFFGVRLRSPVL 85 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG ++ IN+NLA AA++ V M +GSQR+M A SF +R AP Sbjct: 86 IGAMTGGA-QLSGTINKNLAAAAQELGVGMMLGSQRIMLDSALGEQAAASFTVRDVAPDV 144 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+G QL A +A+ +GAD L +H NPLQE IQ NG+T+F+ ++ Sbjct: 145 LLFGNIGLAQLTRAAVPDLA-KALDRVGADALAVHTNPLQEAIQRNGDTDFSGSLGRLRE 203 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGL----KSGIRYFDIAGRGGTSWSRIESHRDLESD 233 ++ A++ P+LLKEVG G+ + + + D+AG GGTSWSR+E Sbjct: 204 VADAIECPVLLKEVGHGIGGAAAAELVGAEGELPVSGIDVAGAGGTSWSRVEQFVRYGEL 263 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R +ASGG+R G+D K+I LGA + +A P L Sbjct: 264 RYPHLADWGIPTARAIVEVREVLPGIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPA 323 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++S+ AVV ++ E V + G + L Sbjct: 324 AIESAAAVVDWLQPFIDELRVCLHGCGVTNLAGLR 358 >gi|219685527|ref|ZP_03540344.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii Far04] gi|219672926|gb|EED29948.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii Far04] Length = 359 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 113/334 (33%), Positives = 176/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + + F L H AL + +F E+ E G ++ P+ I Sbjct: 12 ILENKKRHIEICLNENDVKGGCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNINMPVFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K N++L A K+ + +GS +++F I F L++YA L + Sbjct: 72 SSMTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYITDFSLKRYAYDIPLFA 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS Sbjct: 131 NIGAVQI-VEFGISRIAEMIKRLEVDAIVIHLNAGQELMNVNGDRNFKGIKESIAKLSEF 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ K G+ Y D+AG GGT+W +E R + ++ F DW Sbjct: 190 ISVPLIVKETGFGISPNDVKELFKLGVSYVDLAGSGGTNWVLVEGVRSNDLNVASCFSDW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L + ASGG G+DI+K I LGA L G+A+ L+ +S + A Sbjct: 250 GIPSIFTLLSI-DDSLKTNVFASGGYETGMDIVKGIALGAKLIGVAAVVLRAFYNSGEDA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V++ +SMFL G+K + EL N + Sbjct: 309 VISLFSDYEHVLKMSMFLSGSKSLSELRKNKYFL 342 >gi|119719190|ref|YP_919685.1| isopentenyl pyrophosphate isomerase [Thermofilum pendens Hrk 5] gi|119524310|gb|ABL77682.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermofilum pendens Hrk 5] Length = 361 Score = 331 bits (850), Expect = 8e-89, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 183/346 (52%), Gaps = 10/346 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRN-KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 ++ RK H+ K+ R + +H+ + E +F +VD S +FLG +++ P+ Sbjct: 5 IIFTRKDQHLVYSLKENVQARGVTTLLECVRFVHQTVLEANFSDVDVSTKFLGYEVAAPI 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +IS M G M ++N LA A++ KV + VGSQR D A+++F + R+ AP Sbjct: 65 VISGM-TGGTPMGGKVNAMLAEVAQRLKVPIGVGSQRAALKDRAAVETFRVVREKAPDVP 123 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I+N+GA Q++ + + + ++GAD L +HLNPLQE++QP G +F + + + Sbjct: 124 VIANIGASQVSMGLSAGEVQELLDMVGADALAVHLNPLQEVLQPEGEPSFKNFLGNLREI 183 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR------DLES 232 ++ VP++LK+ G G S +G++ D+ G GGTS++ IE R DL Sbjct: 184 VKSVKVPVILKQTGEGFSRESALKIADTGVKGVDVGGAGGTSFAVIEGLRARYAGLDLHE 243 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I F WGIPT S+ R + IA+GG+R+G+D K I LGA GLA P LK Sbjct: 244 EIAFEFAGWGIPTAASVLEVRSALPDILLIATGGIRSGLDAAKVIRLGADFAGLALPVLK 303 Query: 293 PAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +E + +E +++FL G + + +L +I + Sbjct: 304 EVYYRGVEGGYRFLEKVIRELKIAVFLTGGRTLADLKNAPIVITGE 349 >gi|319645245|ref|ZP_07999478.1| isopentenyl-diphosphate delta-isomerase [Bacillus sp. BT1B_CT2] gi|317393054|gb|EFV73848.1| isopentenyl-diphosphate delta-isomerase [Bacillus sp. BT1B_CT2] Length = 310 Score = 331 bits (850), Expect = 8e-89, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 165/298 (55%), Gaps = 9/298 (3%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 +VD S + LS P+ I++MTGG K INR LA AA +T + +AVGSQ Sbjct: 1 MSQVDTSTKIGELFLSSPIFINAMTGGGGKATFEINRALARAAAQTGIPVAVGSQMSALK 60 Query: 101 DHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 D + S+E +R+ ++ +NLG+ + V++A +AV ++ AD L +HLN +QEI Sbjct: 61 DPDERPSYEIVRKENMKGLVFANLGS-----EATVEQAKRAVDMIEADMLQIHLNVIQEI 115 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + P G+ NF +I + ++ VP+ +KEVG G+S G++ D+ G GGT Sbjct: 116 VMPEGDRNFTGRLRRIEDICRSVSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGT 175 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 ++S+IE+ R ++ F WGI T SL + IASGG+++ +D+ KSI L Sbjct: 176 NFSKIENLRRDKAV--EFFDQWGISTAASLAEVSSISGDRPIIASGGIQDALDLAKSIAL 233 Query: 280 GASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 GAS G+A FLK +A+ A IESL ++F M +LG + +++L +I+ Sbjct: 234 GASAAGMAGYFLKVLTASGEEALAAEIESLIEDFKRIMTVLGCRTIEQLKKAPLVIKG 291 >gi|225551735|ref|ZP_03772678.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia sp. SV1] gi|225371530|gb|EEH00957.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia sp. SV1] Length = 354 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 174/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKSGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANDLKIPMGLGSFKLLFKYPEYIRDFALKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ AVQ+ +FG+ K + + L D + +HLN QE++ NG+ NF + IA LS Sbjct: 126 NISAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGVSYVDLAGSGGTNWILVEGMKSHNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ + DA Sbjct: 245 GIPSIFTLLSV-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYNSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V + +SMFL G+K + EL N + Sbjct: 304 VFSLFSDYEHVLKMSMFLSGSKSLSELRNNKYFL 337 >gi|257870999|ref|ZP_05650652.1| isopentenyl-diphosphate delta-isomerase [Enterococcus gallinarum EG2] gi|257805163|gb|EEV33985.1| isopentenyl-diphosphate delta-isomerase [Enterococcus gallinarum EG2] Length = 346 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 176/335 (52%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ FD +IH++ PEI +V E G+ + P I++ Sbjct: 2 NRKDEHVSLAKAFH--KPRLNDFDAVQIIHQSFPEIDSAQVTLETELFGRSFATPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG+ K ++IN++LA A+ + MA GS D +F++ RQ P L++N Sbjct: 60 MTGGSEK-SKKINQDLAEVAKACDLMMATGSVSAALKDPALSDTFQVVRQVNPEGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V+ A +A+ + AD L +HLN QE++ P G+ F++ S + + A Sbjct: 119 VGA-----GSSVENALRAIDLFEADALQIHLNAPQELVMPEGDREFSNWLSLLEQIVKAA 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G++ I+ + G++ D+AG GGTS+++IE+ R + ++ +G Sbjct: 174 PVPVVVKEVGFGMTRETIQQLISVGVQTIDVAGSGGTSFTQIENARRKKREMA-YLNHFG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAV 301 T +SL A + IASGG+R+ DI K++ LGA G+++ L +D + Sbjct: 233 QSTVISLLEANEVQHSFTTIASGGIRDAFDIFKALCLGAKSVGISATILTMLLDKGPEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A I+S +++ + ++G Q+L + Sbjct: 293 IATIQSWKEQLQLLYTMVGQTLTQDLTNVPLIFSG 327 >gi|154686534|ref|YP_001421695.1| isopentenyl pyrophosphate isomerase [Bacillus amyloliquefaciens FZB42] gi|166226194|sp|A7Z638|IDI2_BACA2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|154352385|gb|ABS74464.1| Fni [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 176/336 (52%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK +HIN + DD +H +LP ++ ++VD S + G S P+ I+ Sbjct: 4 AERKREHINHALSTG--QNRETGLDDITFVHVSLPNLALEKVDISTKIGGLTSSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG ++ INR+LA AA K + +AVGSQ D + S+E +R+ P ++ + Sbjct: 62 AMTGGGGQLTYEINRSLARAARKAGMPLAVGSQMSALKDPSERCSYEIVRKENPDGLIFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + ++A AV ++ AD L +HLN +QEI+ P G+ +F +I +++ Sbjct: 122 NLGS-----EADAEQAKMAVDMIQADALQIHLNVIQEIVMPEGDRSFTGALGRIERIAAE 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+ +KEVG G+S +G D G GGT++S+IE+ R ++ F W Sbjct: 177 AGVPVFVKEVGFGMSRESARQLFDAGAAAVDAGGYGGTNFSKIENMRREKA--LQFFNTW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI T SL + IASGGL++ +D+ KSI LGAS G+A FLK + Sbjct: 235 GISTAASLAEIHSLSADQSIIASGGLQSALDVAKSIALGASGAGMAGTFLKALTSKGEEG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + +L +E + M LG + V +L +I+ Sbjct: 295 LFDEMTALLQELKMIMTALGCQSVSQLQKAPLVIKG 330 >gi|224534520|ref|ZP_03675096.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia spielmanii A14S] gi|224514197|gb|EEF84515.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia spielmanii A14S] Length = 354 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 112/334 (33%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI+I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIDICLNKNDVKSGCNFLKFVRLKHNALSDFNFSEINIKEEVFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F IK F L+ +A + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVKIANCLKIPIGLGSFKLLFKYPEYIKDFSLKSHACNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ Sbjct: 126 NIGAVQIA-EFGISRIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAQLSNF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KE G G+S D++ K G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 SSVPVIVKETGFGISPNDVKELFKLGVFYIDLAGSGGTNWVLVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A L+ + D Sbjct: 245 GIPSTFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAGVVLRAFYNSGEDG 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V + +SMFL G+K + E N + Sbjct: 304 VFSLFSDYEHVLKMSMFLSGSKNLSEFRNNKYFL 337 >gi|111115517|ref|YP_710135.1| isopentenyl pyrophosphate isomerase [Borrelia afzelii PKo] gi|122956330|sp|Q0SMG9|IDI2_BORAP RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|110890791|gb|ABH01959.1| carotenoid biosynthesis protein, putative [Borrelia afzelii PKo] Length = 354 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 176/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI+I + F L H AL + +F E+D E G +S P+ I Sbjct: 7 ILENKKRHIDICLNKNDVKSGCNFLRFVKLKHNALSDFNFSEIDIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K N++L A K+ + +GS +++F I+ F L++YA L + Sbjct: 67 SSMTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFALKRYAHSIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ Sbjct: 126 NIGAVQI-VEFGISRIVEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSNF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ + G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 ISVPLIVKETGFGISPSDVKKLFQLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSIFTLLSINDSL-KANIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V + +SMFL G+K + + N + Sbjct: 304 VFSLFSDYEHVLKMSMFLSGSKSLSDFRNNKYFL 337 >gi|226320479|ref|ZP_03796045.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 29805] gi|226234121|gb|EEH32836.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 29805] Length = 359 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 115/336 (34%), Positives = 174/336 (51%), Gaps = 4/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 12 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F IK F L++YA L + Sbjct: 72 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHDIPLFA 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 131 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDF 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 190 LSVPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L + ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 250 GIPSIFTLLSV-DDSLKTNIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V +SMFL G+K + EL + + + Sbjct: 309 VFNLFSDYEHVLKMSMFLSGSKSLSELRNDKYFLSN 344 >gi|315303053|ref|ZP_07873760.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria ivanovii FSL F6-596] gi|313628574|gb|EFR97000.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria ivanovii FSL F6-596] Length = 358 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 96/340 (28%), Positives = 177/340 (52%), Gaps = 11/340 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K K DD LI ++P + E+D + ++FP Sbjct: 8 LRERRKDEHVALGVKQ-NEQLGKSSLDDIQLIGTSIPRYNVREIDLTTTICKTNVAFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A++ + MAVGSQ + I ++++ R PH V+ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAKEVGIPMAVGSQSAALKNSALIDTYQVVRDVNPHGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + ++ +AV +L A+ L +H+NP QE++ G+ +F+ +I Sbjct: 126 LANVS-----PEVKIEDGLRAVEMLEANALQIHINPAQELVMQEGDRSFSHWQERIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG GL+ + G++ D+AG+GGT++++IE+ R + + Sbjct: 181 KISPVPIIVKEVGFGLTRETVTSLTNIGVQTVDLAGKGGTNFAQIENDRRRDHAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 DWG+ T +L M E F++SGG+R+ +DI+KS+ LGA+ G+A + D Sbjct: 240 DWGVTTGQALLDMQHADAPEVAFLSSGGIRSPLDIVKSLALGANSVGMAGQVIYALKKDG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +A +E +++ L K + EL + ++ + Sbjct: 300 VEKTIAKLELWKEQLRGLFVLADAKNITELKQTSLIVTGE 339 >gi|256847335|ref|ZP_05552781.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715999|gb|EEU30974.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus coleohominis 101-4-CHN] Length = 342 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 104/327 (31%), Positives = 183/327 (55%), Gaps = 11/327 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ K ++ FD L+ ALPE + +V P+++ + +P Sbjct: 6 AKRKNEHLSLAEKFYDQTHHQHPFDQVRLLPNALPETAVADVKPAIKIGRLHMQWPFYFE 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+++ +++N LA A+KT +AMA GS + F SF +R+ P ++I+ Sbjct: 66 AMTGGSDQA-KKVNTALARVAQKTGLAMATGSLSITFKLPQFNDSFKTVRKINPDGIVIA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA + V++A QA+ +L AD L +HLN QEI+ P G +F ++ I L Sbjct: 125 NLGA-----NVTVEQAQQAIDLLHADALEIHLNSTQEIVMPEGERSFR-WAANIKKLIQH 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G++ ++ K G+ +I+GRGGT++ +IE R+ ++ ++Q W Sbjct: 179 LDVPIIVKEVGFGMTKENLTSLKKLGVSLVNISGRGGTNFVKIEDRRNHDASFADLYQ-W 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDA 300 G+ TP SL A+ + IASGG+ +D++K+ ++GA G+A FL + D Sbjct: 238 GLTTPESLFEAQMV-KDLTVIASGGITCPLDVIKAGVMGAQAVGVAGYFLHEYYQNGEDG 296 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + + ++E M +LG + +L Sbjct: 297 LLQTVLNWQEELKRIMTILGCQHFNDL 323 >gi|216263523|ref|ZP_03435518.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia afzelii ACA-1] gi|215980367|gb|EEC21188.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia afzelii ACA-1] Length = 354 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 176/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI+I + F L H AL + +F E+D E G +S P+ I Sbjct: 7 ILENKKRHIDICLNKNDVKSGCNFLRFVKLKHNALSDFNFSEIDIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K N++L A K+ + +GS +++F I+ F L++YA L + Sbjct: 67 SSMTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFALKRYAHSIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS+ Sbjct: 126 NIGAVQI-VEFGISRIVEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSNF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ + G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 ISVPLIVKETGFGISPSDVKKLFQLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSIFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V + +SMFL G+K + + N + Sbjct: 304 VFSLFSDYEHVLKMSMFLSGSKSLSDFRNNKYFL 337 >gi|171184533|ref|YP_001793452.1| isopentenyl pyrophosphate isomerase [Thermoproteus neutrophilus V24Sta] gi|226707322|sp|B1YA32|IDI2_THENV RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|170933745|gb|ACB39006.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermoproteus neutrophilus V24Sta] Length = 354 Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 16/342 (4%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++ RK DHI + +FD+ LIH ALPE+ EVD + +FLG ++ P I Sbjct: 3 IDRRKNDHIYLA-SSEISQVGSPWFDEVILIHNALPELDLSEVDTTAKFLGAEVKAPFGI 61 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG + +IN LA AAE + + VGSQR+ +FE+ ++ AP + Sbjct: 62 GAMTGGTE-LAGKINAELAKAAEAFGIPIYVGSQRIALVKPEVRWTFEVVKKNAPTVPKV 120 Query: 121 SNLGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLGA QL V+ A QAV ++ A + +HLN QE +QP G F + KI + Sbjct: 121 ANLGAPQLVELDEVKLAEWVSQAVDMVDAHAVAIHLNAAQEAVQPEGEPRFRGVLEKIKV 180 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE------SHRDLE 231 + A PL++KEVG G+S D+ G GGTS+ IE + L Sbjct: 181 VKRAAGRPLIVKEVGNGISREVAARLAGV-ADAIDVGGYGGTSFIAIEGARAAGAGAQLR 239 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I F+ WGIPT S+ A+ IASGG+R+G+D +K++ LGAS ++ P L Sbjct: 240 RRIAETFKLWGIPTAASICEAKSGYGGY-IIASGGIRSGLDGVKALALGASFFTMSQPLL 298 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K A++ + IE++ E +MFL+G + V+++ + Sbjct: 299 KAALEGR--LKEEIETVVAEVKTAMFLIGARTVKDIASAPRV 338 >gi|119094191|gb|ABL61013.1| isopentenyl-diphosphate delta isomerase isomerase Idi [uncultured marine bacterium HF10_25F10] Length = 361 Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 120/308 (38%), Positives = 170/308 (55%), Gaps = 9/308 (2%) Query: 23 KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA 82 F+ L H ALPE S ++D + LG+ + PL I SMTGG + IN LA Sbjct: 34 SAGFERVRLEHCALPECSLADIDITTSCLGRPVEAPLFIGSMTGGTAHA-DAINAVLADT 92 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 AE T +A+AVGSQR + LRQ AP LI NLG VQL G+ A +AV Sbjct: 93 AEATGIALAVGSQRASIESGRSQAV--LRQRAPSVPLIGNLGGVQLAAPGGIDLACRAVV 150 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +GAD +F+HLNPLQE +QP G T++ + I L ++VP+++KEVG G+ + Sbjct: 151 DIGADAIFIHLNPLQEAVQPEGETDWRGVLDAIETLVGVLEVPVMVKEVGAGIGPDVAQR 210 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G+ DIAG GGT+W+RIE+ R ++ + F DWG+PT +L R C A+ I Sbjct: 211 LFDAGVHAVDIAGLGGTNWTRIEAARREDAALFEPFLDWGLPTVDALRAVRSACPNARLI 270 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD------SSDAVVAAIESLRKEFIVSM 316 ASGG+ NG+D K++ LGA+L +A P L+ A V IE + + +++ Sbjct: 271 ASGGVENGLDAAKALWLGAALVSMAGPVLRVLTGDGRGAPDGAAAVHVIERWKSQLRLAL 330 Query: 317 FLLGTKRV 324 FL G + Sbjct: 331 FLTGAPDL 338 >gi|312149599|gb|ADQ29670.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi N40] Length = 354 Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 176/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + + F L H AL + +F E+ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSIFTLLSV-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + EL + + Sbjct: 304 VFNLFSDYEHVLKMSMFLSGSKSLSELRNDKYFL 337 >gi|224531898|ref|ZP_03672530.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia valaisiana VS116] gi|224511363|gb|EEF81769.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia valaisiana VS116] Length = 354 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 175/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFDFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEFIRDFALKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE++ NG+ NF + IA LS Sbjct: 126 NIGAVQV-VEFGIFKIAEMIKRLEVDAIIVHLNAGQELMNVNGDRNFKGIKESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +PL++KE G G+S D++ L+ G Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSIPLIVKETGFGISPRDVKELLRLGASYIDLAGSGGTNWVLVEGMKGDNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L + ASGG G+DI K I LGA L G+A+ L+ +S + A Sbjct: 245 GIPSIFTLLSI-DDSLKTNIFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYESGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V + +SMFL G+K + EL N + Sbjct: 304 VFSLFSDYEHVLKMSMFLSGSKNLSELRNNKYFL 337 >gi|188586254|ref|YP_001917799.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350941|gb|ACB85211.1| isopentenyl-diphosphate delta-isomerase, type 2 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 350 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 177/342 (51%), Gaps = 15/342 (4%) Query: 1 MV--NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 M+ +DRK DH+++ + +D L+H LPE ++DE++ S G + P Sbjct: 1 MINRSDRKSDHLHLAINQYD---TQNILEDIKLLHNCLPECNYDEINLSTSLCGLNFNNP 57 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHT 117 ++I+++TGG + ++N+ +A A + + MAVGSQ++ D N +FE+ R+ P Sbjct: 58 IMINAITGGTQEAY-QLNKKIASVAREVNIPMAVGSQKIALEDQNYQDTFEVVRRENPRG 116 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 V+ +N+GA Q A Q ++ ADGL +HLN QE+ G+ +F ++ IA Sbjct: 117 VIFANIGAYA-----TPQMAQQICEMIKADGLQIHLNIPQELAMGEGDRSFQGYANNIAK 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + +D+P+++KEVG G+ +I + G++ DI+G GGT++ +E+ R + ++ Sbjct: 172 IIDYVDIPVIVKEVGFGVKKEEISKLMDIGVKAVDISGCGGTNFINLENSRLEQPNL-PS 230 Query: 238 FQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +DWGI T SL A + IASGG ++I K++ LGA LA L Sbjct: 231 AKDWGIDTGSSLLEAVESSYHNLDIIASGGFSRSIEITKALALGARCVALAGYPLHILWH 290 Query: 297 -SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 D +++ +E L E M + G + +L LI + Sbjct: 291 YGQDELISQLEQLLTELRSMMLMCGATSISQLCQTPLLITGK 332 >gi|13878559|sp|Q9KWF6|IDI2_KITGR RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|9711349|dbj|BAB07820.1| hypothetical protein [Kitasatospora griseola] Length = 364 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DH+ + + + FDD +H AL I +V + F G PL I+ Sbjct: 4 AQRKDDHVRLATEQQRAHSGRNQFDDVSFVHHALAGIDRPDVRLATTFAGITWRLPLYIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ K INR+LA+AA +T A+A GS F D + +F + R P +++ Sbjct: 64 AMTGGSAK-TGAINRDLAVAARETGAAIASGSMHAFFRDPSCADTFRVLRTENPDGFVMA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ A V A +AV ++ A+ L +HLN QE P G+ +F ++IA +++A Sbjct: 123 NVNATA-----SVDNARRAVDLIEANALQIHLNTAQETPMPEGDRSFGSWPAQIAKITAA 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG GLS + G+R D++GRGGT ++RIE+ R D W Sbjct: 178 VDVPVIVKEVGNGLSRQTLLALPDLGVRVADVSGRGGTDFARIENSRRPLGDYAF-LHGW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 G TP L A+ +ASGG+RN +D+ +++ LGA G + FL+ +D A Sbjct: 237 GQSTPACLLDAQDV--GFPLLASGGIRNPLDVARALALGAGAVGSSGVFLRTLIDGGVSA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +VA I + + +LG + +L LI Sbjct: 295 LVAQISTWLDQLAALQTMLGARTPADLTRCDVLIHG 330 >gi|108798922|ref|YP_639119.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. MCS] gi|119868037|ref|YP_937989.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. KMS] gi|126434522|ref|YP_001070213.1| isopentenyl pyrophosphate isomerase [Mycobacterium sp. JLS] gi|108769341|gb|ABG08063.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [Mycobacterium sp. MCS] gi|119694126|gb|ABL91199.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. KMS] gi|126234322|gb|ABN97722.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium sp. JLS] Length = 348 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 116/333 (34%), Positives = 174/333 (52%), Gaps = 3/333 (0%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ P + + L + AL + S V FLGK LS P+L Sbjct: 16 METRKRRHIDVCLGGPVEYQTVTTGLERYRLPYNALTQTSLSRVRLDTRFLGKPLSAPVL 75 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG + INRNLA AA++ V M +GSQR+MF + SF +R AP +LI Sbjct: 76 IGAMTGGAE-LSGVINRNLAAAAQRLGVGMMLGSQRIMFDNDAVASSFAVRDIAPDVLLI 134 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G QL+ + +A+ +GAD L +H NPLQE +Q +G+T+F ++ L++ Sbjct: 135 GNVGLAQLSEPV-MPALERALERVGADALAVHTNPLQEAMQRDGDTDFTGSIDRLRTLAA 193 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P++LKEVG G+ + S + D+AG GGTSW+R+E + Sbjct: 194 TLRQPVMLKEVGHGIGAAAAAELAGSALAAVDVAGAGGTSWARVEQLVRYGEIRSPALAE 253 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WGIPT +L R + +ASGG+R G+D K++ +GA + +A P L PA++S+DA Sbjct: 254 WGIPTAQALLEVRGTLPDVAVVASGGIRTGMDAAKALAMGADVVAVARPLLAPAIESADA 313 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 VV + E V + G + L L Sbjct: 314 VVEWLRGFIDELRVCLHGCGAADLPALRRGGVL 346 >gi|315282254|ref|ZP_07870704.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria marthii FSL S4-120] gi|313614101|gb|EFR87795.1| isopentenyl-diphosphate delta-isomerase, type 2 [Listeria marthii FSL S4-120] Length = 358 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 173/342 (50%), Gaps = 15/342 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + G + FP Sbjct: 8 LRERRKDEHVALGVKQNEQLALSS-LEDIQLIGTSIPRYNVKDIDLTTTIFGTNVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P V+ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREVNPAGVI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +AV +L AD L +H+NP QE++ G+ F+ ++I Sbjct: 126 LANVS-----PEVDIQDGLRAVEMLEADALQIHINPAQELVMEEGDRAFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+++KEVG G++ ++ + G+ D+AG+GGT++++IE+ R + + Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLAEVGVETVDLAGKGGTNFAQIENDRRRDHAYDFLL- 239 Query: 240 DWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWGI T +L M + ++ASGG+RN +DI+K++ LGA G+A + Sbjct: 240 DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALGADSVGMAGQIIYSLKK-- 297 Query: 299 DAVVAAIESL---RKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 D V IE L ++ L K + EL ++ + Sbjct: 298 DGVTNTIEKLXXXXEQLRGLFVLADAKNIAELKTTPLIVSGE 339 >gi|195941503|ref|ZP_03086885.1| isopentenyl pyrophosphate isomerase [Borrelia burgdorferi 80a] Length = 354 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 175/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F IK F L++YA L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHDIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKIDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 245 GIPSIFTLLSV-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + EL + + Sbjct: 304 VFGLFSDYEHILKMSMFLSGSKSLSELRNDKYFL 337 >gi|167630051|ref|YP_001680550.1| isopentenyl-diphosphate delta-isomerase, type 2 [Heliobacterium modesticaldum Ice1] gi|167592791|gb|ABZ84539.1| isopentenyl-diphosphate delta-isomerase, type 2 [Heliobacterium modesticaldum Ice1] Length = 373 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 125/357 (35%), Positives = 182/357 (50%), Gaps = 30/357 (8%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+DHI F D L+H ALP + F VD SV ++GK+L+ PLL Sbjct: 3 IRQQRKLDHIRQALALDD-GPLSNGFQDVRLLHDALPTVDFRAVDLSVPWMGKRLTMPLL 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I+++TGG + ++ INR LA A + VA+AVGSQ D S+ + R P V+ Sbjct: 62 INAITGGTS-LVTEINRRLARLAARNGVAVAVGSQAAALRDPRLRDSYRVVRDENPDGVV 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +N+ N + V+KA +AV +L ADGL +HLNP QE+ G+ +F S IA L Sbjct: 121 FANV-----NPNTPVEKALEAVTMLEADGLQVHLNPAQELAMAEGDRDFRHWSGNIAELV 175 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VPL++KEVG G+S + L G+R D+ G GGT++ IE R S F+ Sbjct: 176 RHCPVPLIVKEVGAGISMETAKRLLDLGVRCIDVGGAGGTNFVAIELRRQGLSV--PAFE 233 Query: 240 DWGIPTPLSLEMA-------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 WGIPT SL + ++A IASGG+R+G + K++ +GASL G+A LK Sbjct: 234 AWGIPTAASLAETVWAVESRQSVGDKATIIASGGIRDGWEAAKALSMGASLVGIAGAPLK 293 Query: 293 PAM-------------DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + A I+S R V++ L G+ R+ +L L+ Sbjct: 294 GLLGGSPGAFSPSGNAEGDKAAQGWIDSFRHALQVNLALTGSSRIADLQNRPCLLTG 350 >gi|219684388|ref|ZP_03539332.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii PBr] gi|219672377|gb|EED29430.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia garinii PBr] Length = 354 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 112/334 (33%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + K HI I + F L H AL + +F E+ E G ++ P+ I Sbjct: 7 ILKNKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISIKEEIFGYNINMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K N++L A K+ + +GS +++F I F L++YA L + Sbjct: 67 SSMTGGG-KEGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYITDFSLKRYAYDIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + +HLN QE++ NG+ NF + IA LS Sbjct: 126 NIGAVQI-VEFGISRIAEMIKRLEVDAIVIHLNAGQELMNVNGDRNFKGIKESIANLSEF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP ++KE G G+S D++ K G+ Y D+AG GGT+W +E R + ++ F DW Sbjct: 185 ISVPSIVKETGFGISPNDVKELFKLGVSYVDLAGSGGTNWVLVEGMRSNDLNVASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L + ASGG G+DI+K I LGA L G+A+ L+ +S + A Sbjct: 245 GIPSIFTLLSI-DDSLKTNVFASGGYETGMDIVKGIALGAKLIGVAAVVLRAFYNSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V++ +SMFL G+K + EL N + Sbjct: 304 VISLFSDYEHVLKMSMFLSGSKSLSELRKNKYFL 337 >gi|84626172|gb|ABC50109.1| isopentenyl pyrophosphate isomerase [Brevundimonas vesicularis] Length = 347 Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats. Identities = 117/321 (36%), Positives = 178/321 (55%), Gaps = 5/321 (1%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI+ V G+ + D +H ALP+I D +D + FLG++++ P LISSM Sbjct: 11 RKDEHIDHVRAGRGVSQTTSGLDAVRFVHDALPDIDHDAIDLATRFLGRRVALPFLISSM 70 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNL 123 TGG ++ E IN LA AA+ V +AVGSQRV + + AP ++++NL Sbjct: 71 TGGPSRA-EAINARLAEAAQALGVVLAVGSQRVALETDGGLGLGLDLRRRAPDAMILANL 129 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GAVQ +GV +A +A+ ++GAD L LHLNPLQE +QP G+ ++ ++ I +++A Sbjct: 130 GAVQFALGYGVDEARRAMEMIGADALILHLNPLQEGVQPEGDRDWRGVARGIERVAAAFP 189 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD---IGIVFQD 240 L++KE G GLS G+ D+AG GGT+W IE R + F Sbjct: 190 GRLIVKETGAGLSGAVARRLADMGVAALDVAGAGGTNWGLIEGARATGGRAEALAAPFAA 249 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 WG+PT SL E I SGG+R+G+D ++I LGA L G A+ L+ A+ ++A Sbjct: 250 WGVPTARSLLNCAQAAPELDLIGSGGIRDGLDAARAIRLGACLVGQAAGVLEAALTGTEA 309 Query: 301 VVAAIESLRKEFIVSMFLLGT 321 VV ++ + + ++ F G+ Sbjct: 310 VVDHLDLMAAQLRLACFCTGS 330 >gi|227500799|ref|ZP_03930848.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus tetradius ATCC 35098] gi|227217104|gb|EEI82462.1| possible isopentenyl-diphosphate delta-isomerase [Anaerococcus tetradius ATCC 35098] Length = 336 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 110/334 (32%), Positives = 181/334 (54%), Gaps = 11/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI K + DD ++ H AL +S DE+D S+EFLGKK++ PL++++M Sbjct: 7 RKDEHIENYLKSESL--TNSLLDDIYIEHNALGNLSLDEIDTSIEFLGKKITMPLMVNAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + IN +L+ E + MAVGS+ + D + +F L + + I NLG Sbjct: 65 TGGGEAGCD-INEDLSSICESVGIPMAVGSEAIAIDDEESRDAFTLMKD-KELIKIGNLG 122 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + + ++ A ++ A+ + +HLN QE++ P G+ +F L I L D+ Sbjct: 123 S-----ERSLEDFIFARDLIKANAMQVHLNIAQELVMPEGDRDFRKLDENIKNLVENFDL 177 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++KE G G+S + + G++Y D+AG+GGT++ IE RD+E+D ++ DWGIP Sbjct: 178 PIIVKETGSGISKKVAQKLMTMGVKYIDVAGKGGTNFIEIEDLRDVETDFSEIY-DWGIP 236 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 T S+ R IASGGLRN +DI+KSII+GA + ++ L+ + +A Sbjct: 237 TAKSIIDVRSVSKNVFIIASGGLRNAMDIVKSIIIGADMAAMSGEVLRYLLHGGYEACED 296 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + L + + M L+G K ++EL + + Sbjct: 297 FLRDLNYKIKIIMCLVGAKNIEELKKVDYKVIGR 330 >gi|226312031|ref|YP_002771925.1| isopentenyl pyrophosphate isomerase [Brevibacillus brevis NBRC 100599] gi|226094979|dbj|BAH43421.1| probable isopentenyl-diphosphate delta-isomerase [Brevibacillus brevis NBRC 100599] Length = 350 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 107/336 (31%), Positives = 186/336 (55%), Gaps = 13/336 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK+DHI ++ FDD + +LP + E +LS P++I++M Sbjct: 7 RKLDHIRNAL--ITLENGANSFDDVSFVPNSLPNAALAETSLDTVIASLRLSSPIMINAM 64 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG +IN+ LAI A + +AMAVGSQ D + S+ +R+ P +L +N+ Sbjct: 65 TGGAG-GTTQINQKLAIIARERNLAMAVGSQMAALRDPDVTDSYLIVRREHPQGILFANV 123 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA + V++A AV ++ A+GL +HLN +QE++ P G+ +F +I + ++D Sbjct: 124 GA-----EATVEQAIAAVEMMQANGLQIHLNVMQELLMPEGDRDFRGYLERIQAIRESLD 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ IE ++ GIR D+ GRGGT+++++E+ R+ + + +F+DWG Sbjct: 179 VPVIVKEVGFGMAKESIEKLIEIGIRTIDVGGRGGTNFAQVENMRNDQPN--AMFEDWGF 236 Query: 244 PTPLSLEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A +IA+GG+R+G+D++K+ LGAS G+A L+ +S + Sbjct: 237 TTVESLLEANAVGHPGVSYIATGGVRHGLDVVKAASLGASAVGMAGAMLRLVQRESLEDC 296 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ ++ + V+M LG K + + +I + Sbjct: 297 LSTVDRWHHQIRVAMTALGMKGLADAVCTPVMIAGK 332 >gi|297527605|ref|YP_003669629.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus hellenicus DSM 12710] gi|297256521|gb|ADI32730.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus hellenicus DSM 12710] Length = 375 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 193/345 (55%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK++HI+I+ K+ D + +D L+H+A P+I +E D ++FLG + PL Sbjct: 5 IGERKLEHIDIILKENVDFSDHCSEIYDSIMLVHQAFPKIDLEETDLRIDFLGYTIKAPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFE-LRQYAP 115 +I+ MTGG+ + +IN LA A++ +A+ VGSQR M + + +K++ +R+ A Sbjct: 65 MITGMTGGHRNVT-KINEKLARLAQELGIAIGVGSQRPMIIYRENSDVLKTYRIVRKTAQ 123 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSK 174 +I N+G +N D + + + AD L +HLNP QE IQP G+T F+ ++ +K Sbjct: 124 DVPVIGNIGINTIN-DLSINDVEFLIKSIEADALAIHLNPAQEAIQPEGDTRFSDNVIAK 182 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR----DL 230 I + +DVP+++KEVG G+S L GIRYFD++G GT+W +E +R + Sbjct: 183 IEEVLDNIDVPVIIKEVGNGISMETASLFRSIGIRYFDVSGSCGTNWILVEKYRSRTPEY 242 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + I + WGIPTPL++ R ++ IASGG+ +G+ +KS++LGA++ G+A P Sbjct: 243 KRRIAEILSKWGIPTPLAIIETRNAAPDSFIIASGGVWDGLKAVKSLVLGANMVGIAKPI 302 Query: 291 LKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + + + +FL+G K E ++ Sbjct: 303 IYLLLKQGYNKAYEFLYTYIETIRTILFLIGAKNPNEARGKPVVL 347 >gi|329889443|ref|ZP_08267786.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas diminuta ATCC 11568] gi|328844744|gb|EGF94308.1| isopentenyl-diphosphate delta-isomerase, type 2 [Brevundimonas diminuta ATCC 11568] Length = 328 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 117/325 (36%), Positives = 177/325 (54%), Gaps = 5/325 (1%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 V G FDDW +H ALP++ +D V+FLG++L P LIS+MTGG + Sbjct: 2 VLAGGGRHALSAGFDDWRFVHEALPDLDHARIDLGVDFLGRRLKAPFLISAMTGGPARA- 60 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNLGAVQLNYD 131 E IN LA AA+ +A+AVGSQR A F +R AP T +++N+GA QL Sbjct: 61 EAINARLAEAAQHLGIALAVGSQRAALEGGAAGGLDFSMRLKAPDTPILANIGAAQLTRG 120 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 FG +A +A+ ++GAD L +HLNPLQE QP G+ ++ + + + L +D P+++KE Sbjct: 121 FGRDEARRALDMIGADALVVHLNPLQEACQPEGDRDWWGVGAALQALIRDLDAPVIVKET 180 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQDWGIPTPLS 248 G G+S++ + + G D+AG GG +W IE R + + F DWG+PT + Sbjct: 181 GAGISAVTAQRLIAMGAAGVDVAGAGGANWGLIEGERATDPADKAHALAFADWGVPTARA 240 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 L R +A I SGG+R+GVD K+I LGA + G+AS ++ A S++AV+ + Sbjct: 241 LAETRNAVPDALLIGSGGVRDGVDAAKAIRLGADIVGMASGVIQAATVSTEAVIEQFQLA 300 Query: 309 RKEFIVSMFLLGTKRVQELYLNTAL 333 ++ F + + L L Sbjct: 301 VRQLRTVCFCVNASNLAALKRVPLL 325 >gi|329897192|ref|ZP_08271932.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [gamma proteobacterium IMCC3088] gi|328921347|gb|EGG28741.1| Isopentenyl-diphosphate delta-isomerase, FMN-dependent [gamma proteobacterium IMCC3088] Length = 347 Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 117/338 (34%), Positives = 185/338 (54%), Gaps = 7/338 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 +NDRK +H+ + D ALPE++F E+D GK+L PL+I Sbjct: 6 INDRKSEHLTLAGLPTMQMSVTNGLDSVQFEPCALPELNFSEIDTRCHLFGKELQQPLII 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 +SM+GG + ++N+ LA AAE+ VA+ +GS R+ +F++R AP +++ Sbjct: 66 ASMSGGT-RASRQLNQTLAAAAEQAGVALGLGSMRIAIEQPEQCSTFQVRSIAPSIPILA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G QL G+ A + + + ADG+F+HLNPLQE +Q G+T + + IA L + Sbjct: 125 NIGGAQLVQPEGLSHALKCIDIAEADGIFVHLNPLQEALQSQGDTQWRGVLDAIATLVTL 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR---DLESDIGIVF 238 VP+++KEVG GL + G++Y DIAG GGTSW+ IE+ R D ++ G VF Sbjct: 185 APVPVIVKEVGHGLGPSTARKLVNVGVQYLDIAGAGGTSWAAIETERSRTDNKAQTGEVF 244 Query: 239 QDWGI---PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 ++GI + S++ IASGG+R+G+DI KSI LGAS ASP L A Sbjct: 245 HNFGINLRDSLRSIQQEETLSESLTLIASGGIRSGLDIAKSIRLGASFASAASPILAAAN 304 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++++ +E R++ +S F+ G +++L + Sbjct: 305 HGTESLTEFLEQWRQQLRISCFVTGCASLRDLRYAPLI 342 >gi|317128563|ref|YP_004094845.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cellulosilyticus DSM 2522] gi|315473511|gb|ADU30114.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus cellulosilyticus DSM 2522] Length = 354 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 101/337 (29%), Positives = 178/337 (52%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RKI+H++ + FDD IH++LP+I+ D++ K S P+ I+ Sbjct: 4 SQRKIEHLDNALLTG--QSRESGFDDIRFIHQSLPDINVDDISIQSLIGELKFSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG K E IN LA A + +AVGSQ D +++ +R+ + ++ + Sbjct: 62 AMTGGGGKQTEHINGQLANVANVLNIPIAVGSQMSAIKDATEENTYKIVRKNYQNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A AV+++ A+ + +HLN +QE++ P G+ +F + ++I + + Sbjct: 122 NLGS-----EATLEQAKIAVNMIEANAIQIHLNVIQELVMPEGDRHFRNALNRIESICNN 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S I+ G+ D+ G GGT++S+IE+ R L +F DW Sbjct: 177 IHVPVIVKEVGFGMSRETIDKLYNVGVSVVDVGGFGGTNFSQIENARRLHK--YDIFNDW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIPT S+ A+ +A+GG++ +DI KS+ LGAS G+A LK + + Sbjct: 235 GIPTAASIVEAKQARPSVMVLATGGIQTSLDIAKSLALGASAVGMAGQVLKWITEFDEEY 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + + E + M +G + L L R + Sbjct: 295 TIKNLNLMLDELRLIMTAVGATNINMLQQVPILFRGE 331 >gi|51598939|ref|YP_073127.1| isopentenyl pyrophosphate isomerase [Borrelia garinii PBi] gi|81609816|sp|Q660I6|IDI2_BORGA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51573510|gb|AAU07535.1| carotenoid biosynthesis protein, putative [Borrelia garinii PBi] Length = 354 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 174/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E+ E G ++ P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNINMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K N++L A K+ + +GS +++F I+ F L++YA L + Sbjct: 67 SSMTGGG-KQGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYDIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ + + + L D + HLN QE++ NG+ NF + IA L+ Sbjct: 126 NIGAVQI-VEFGISRIAEMIKRLEVDAIVTHLNAGQELMNVNGDRNFKGIKESIAKLADF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ LK G+ Y D+AG GGT+W +E R ++ F DW Sbjct: 185 LSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ + DA Sbjct: 245 GIPSIFTLLGI-DDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V++ +SMFL G+K + EL N + Sbjct: 304 VLSLFSDYEHVLKMSMFLSGSKSLSELRKNKYFL 337 >gi|259503454|ref|ZP_05746356.1| isopentenyl diphosphate isomerase [Lactobacillus antri DSM 16041] gi|259168532|gb|EEW53027.1| isopentenyl diphosphate isomerase [Lactobacillus antri DSM 16041] Length = 347 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 108/328 (32%), Positives = 170/328 (51%), Gaps = 11/328 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLI 61 RK +H+++ K FD L+H ALPE++ +VD V G+ +LS P + Sbjct: 6 AQRKNEHLSLARKYYDQAHASHPFDQVRLVHTALPEMAVTDVDLKVPLAGQLQLSAPFYL 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+ + INR LA A K ++AMA GS + D A SF + R+ P ++I Sbjct: 66 EAMTGGSQTALT-INRQLARLAAKHRLAMATGSVSIALKDPTARASFTVIREENPDGIVI 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL + + A AV +L AD L LHLN QE++ P G+ F + L++ Sbjct: 125 ANLSS-----GASLADARAAVELLDADALELHLNAAQELVMPEGDRRF-FWLDNLRELAA 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A+ VP+++KEVG G++ D+ ++G++ +++GRGGT+++ IE+ R+ D Sbjct: 179 ALTVPVIVKEVGFGMNKTDVAKLAQAGVQAINVSGRGGTNFALIENRRNHGEDFSS-LAQ 237 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG TP +L AR IASGG+ + +D++K+ LGAS G+A FL Sbjct: 238 WGQTTPEALLEARAAKTGRPIIASGGISSPLDVIKAGALGASSCGVAGYFLNILQTAGPK 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ I + + L G R +L Sbjct: 298 ALDQEIANWLAVLPRLLALQGVSRFADL 325 >gi|257877198|ref|ZP_05656851.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC20] gi|257811364|gb|EEV40184.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC20] Length = 346 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 174/335 (51%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD L+H++ P+I +V + + S P I++ Sbjct: 2 NRKDEHVSLAKAFHKEHSND--FDAVRLVHQSFPQIDVADVSIATTVFDRSFSSPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K + +IN+ LA A+ ++ MA GS D + SF +R+ P L++N Sbjct: 60 MTGGSEKTL-KINQELAEIAQACELMMATGSVSAALKDPSVADSFRIVRKANPDGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA V+ A +AV + GAD L +HLN QE++ P G+ F+ S + +++ Sbjct: 119 IGA-----GSPVENAQRAVELFGADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTMASV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S I+ L G++ D+AG GGTS+++IE+ R + ++ +G Sbjct: 174 AVPVVVKEVGFGMSRETIQQLLAIGVQTIDVAGSGGTSFTQIENARRKKRELA-YLDTFG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T +SL A IASGG+R+ DI K++ LGA GL++ L + + Sbjct: 233 QSTVISLLEANELQQPFTRIASGGVRDAYDIFKALCLGADSVGLSATILVLLLSKGKEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A ++S +++ + + G ++L + Sbjct: 293 IATLQSWKEQLQLLYTMAGQTSTKDLTKVQLIFSG 327 >gi|319651363|ref|ZP_08005492.1| isopentenyl pyrophosphate isomerase [Bacillus sp. 2_A_57_CT2] gi|317396894|gb|EFV77603.1| isopentenyl pyrophosphate isomerase [Bacillus sp. 2_A_57_CT2] Length = 353 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 112/336 (33%), Positives = 182/336 (54%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI + +D IH++LP+ D+ D LS P+ I+ Sbjct: 4 SKRKWDHIQHALATG--QNSNTGLEDIAFIHQSLPDAFLDQADLGTSIGELSLSSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + +INR+LA+AA T +AMAVGSQ D + +S+ + R+ P+ ++I Sbjct: 62 AMTGGGGERTVQINRDLALAARSTGLAMAVGSQMSALKDPSEAESYRVVRRENPYGIIIG 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + + +A AV ++ AD L +HLN +QE+ P G+ +F +I + S Sbjct: 122 NLGS-----EATIDQAKAAVDMIEADALQIHLNVVQELTMPEGDRDFRGALKRIEHIVSH 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +VP+++KEVG G++ + + +G+ DI G GGT++SRIE+ R + F +W Sbjct: 177 SEVPVVVKEVGFGMNKETVSMLASAGVTAIDIGGFGGTNFSRIENARR--ERLLTFFNEW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GIPT +S+ A + IASGG+++ +I K+I LGA G+A FLK M + +A Sbjct: 235 GIPTAVSIAEAVSLEKDIAVIASGGIQSSHEIAKAIALGAGAAGMAGYFLKVLMKEGLEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ I ++ E V M LG + +L + +I Sbjct: 295 LIEEINNMHTELKVLMTALGAANIAQLQQSPIIITG 330 >gi|170290629|ref|YP_001737445.1| isopentenyl pyrophosphate isomerase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174709|gb|ACB07762.1| isopentenyl-diphosphate delta-isomerase, type 2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 360 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 139/341 (40%), Positives = 197/341 (57%), Gaps = 10/341 (2%) Query: 1 MVNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + N RK++HI I D + N ++FD LIH ALP+ SF+E + FLG +L PL Sbjct: 5 LTNRRKVEHIEIALSDDIDLSNNCRWFDFVRLIHNALPDSSFEETQLNWSFLGYELEAPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 LI MTGG+ + +IN LA AA+ +VA+ VGSQR D++ + ++ + R+ A Sbjct: 65 LIEGMTGGHEASL-KINEALARAAQSERVAIGVGSQRAALKDYSVVGTYRVVREIARDVP 123 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 +I+NLG + + GV A AV ++ AD + +HLNPLQE+IQP G+ NF+D + L Sbjct: 124 VIANLGISHILGEEGVDNAKAAVDMIDADAIAIHLNPLQELIQPEGDRNFSDSLISLRDL 183 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL----ESDI 234 +DVP+L+KEVG G+S + GI Y D+AG+GGTSW+ IE R E + Sbjct: 184 VRELDVPVLVKEVGSGISYELSLTLKRIGIEYVDVAGQGGTSWALIEGKRAPSDSIEREA 243 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 I F +WGIPTP+S+ A + I SGG+R+G+D K I LGA G A PF K A Sbjct: 244 SIRFSEWGIPTPISIIEASS--SGLTVIGSGGVRSGLDAAKCIALGAEAAGAARPFFKAA 301 Query: 295 MDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++S D V I S + E ++ FL G+ +L L A I Sbjct: 302 IESGADGVSRKIRSFKFEMKLATFLTGSSTPDQLRLRRAYI 342 >gi|240171561|ref|ZP_04750220.1| isopentenyl pyrophosphate isomerase [Mycobacterium kansasii ATCC 12478] Length = 348 Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 118/335 (35%), Positives = 173/335 (51%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ D + + L AL + S ++D SV+F G L P+L Sbjct: 8 MGRRKRRHIDVCLNGDVNFAGVTTGLERYRLPFNALTQTSLHDIDMSVDFFGASLRAPIL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFELRQYAPHT 117 I +MTGG + INRNLA AA++ + M +GSQR+M A SFE+R AP Sbjct: 68 IGAMTGGAE-LSATINRNLATAAQRLGLGMMLGSQRIMLDRSRGERAAASFEVRDMAPDV 126 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +LI N+G QL + A+ +GA+ L +H N LQE IQ NG+T+F ++ Sbjct: 127 LLIGNIGLAQLTK-AAMPDISNALDRVGANALAVHANSLQEAIQGNGDTDFTGSLHRLCD 185 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSG----IRYFDIAGRGGTSWSRIESHRDLESD 233 ++ A+D PLLLKEVG G+ + + L + + D+AG GGTSWSR+E Sbjct: 186 VAGALDCPLLLKEVGHGIGARAVALLAQLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGEL 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R + SGG+R G+D K+I LGA + LA P L P Sbjct: 246 RYPDLADWGIPTAQAIVEVRQALPTIPLVGSGGIRTGMDAAKAIALGADVVALARPLLAP 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++S+DAV ++ +E + + G + L Sbjct: 306 AIESADAVEDRLQRFIEELRICLHCCGATDLNALR 340 >gi|83590175|ref|YP_430184.1| isopentenyl pyrophosphate isomerase [Moorella thermoacetica ATCC 39073] gi|91207073|sp|Q2RIU8|IDI2_MOOTA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|83573089|gb|ABC19641.1| isopentenyl-diphosphate delta-isomerase [Moorella thermoacetica ATCC 39073] Length = 346 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 107/335 (31%), Positives = 180/335 (53%), Gaps = 13/335 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++H+ +D + +D HL+H+ALPE+++ ++D + +LGK L+ P +I+++ Sbjct: 12 RKLEHLRFFQED---SKGSNGLEDVHLVHQALPELNWSDIDLTCRWLGKTLAAPFIINAL 68 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 TGG + + IN LA A +T +A+AVGSQR + +SF +R+ + ++++N+ Sbjct: 69 TGGPPETLA-INAALARVARRTGIALAVGSQRAGLENKEWRESFTIVRRENANGLILANI 127 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA D G +AV ++ ADGL +HLN QE+I P G+ F I + + + Sbjct: 128 GAGNSPADAG-----EAVAMIAADGLQVHLNAAQELIMPEGDRAFRGWLENIRGMVNTLG 182 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP++ KEVG GLS ++G+R D+ GRGGT+++ IE R S WG+ Sbjct: 183 VPVIAKEVGFGLSRETALQLYQAGVRIMDVGGRGGTNFAAIEERRRGRSVAA--LAGWGL 240 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVV 302 T +S+ R + +A+GG+R+ +D +++ LGA + G A FLK ++ DA+ Sbjct: 241 STAVSILEIRELGLPVEVVATGGIRSALDAARALALGAKIVGAAGYFLKILLEQGEDALT 300 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 I +++ L G EL +I Q Sbjct: 301 EEILQWQEDLKRICLLTGCTTPAELATKPVVITGQ 335 >gi|162447656|ref|YP_001620788.1| isopentenyl pyrophosphate isomerase [Acholeplasma laidlawii PG-8A] gi|161985763|gb|ABX81412.1| isopentenyl-diphosphate delta-isomerase [Acholeplasma laidlawii PG-8A] Length = 323 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 108/334 (32%), Positives = 179/334 (53%), Gaps = 12/334 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK DHINI + FD L LP++S D++D S EFLG K+ +P Sbjct: 1 MSKNRKDDHINIA---KSFKKKSNMFDKILLEGTDLPDLSMDDIDLSTEFLGMKVPYPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+ K +IN L+ A+ + M GSQ +MF D ++I SF++ + +++ Sbjct: 58 INAMTGGSEKA-HKINEFLSKIADHFNLPMVTGSQSIMFKDPSSIDSFKVIRNNHKGIIV 116 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+ N + +++A AV + A+ L +HLN +QE++ G+ +F S+ I + Sbjct: 117 GNI-----NPNMTLEQAQVAVSTIQANALSIHLNVIQELVMNEGDRDFRLWSNHIESVVK 171 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ P+++K+VG GLS I+ G++Y D++G GGTS+ IES R + D Sbjct: 172 HLNKPVIVKQVGLGLSLKTIQKIKTLGVKYIDVSGSGGTSFIDIESTRSAKD--YSYLND 229 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + I T +L + + + ASGG+R+ +D++KS+ILGA GL+ FL A Sbjct: 230 FSIDTAQALINLKN-EKDLEIYASGGIRHPLDVIKSLILGAKACGLSKWFLDLTDLEFAA 288 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +E ++ M +LG +++L T I Sbjct: 289 AVKKVEEFIEDLKKIMLILGVSSLKDLKQVTYNI 322 >gi|126465722|ref|YP_001040831.1| isopentenyl pyrophosphate isomerase [Staphylothermus marinus F1] gi|126014545|gb|ABN69923.1| isopentenyl-diphosphate delta-isomerase, type 2 [Staphylothermus marinus F1] Length = 374 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 116/345 (33%), Positives = 197/345 (57%), Gaps = 14/345 (4%) Query: 2 VNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK++HI+I+ K+ D K +D LIH+A P+I+ +EVD ++FLG ++ PL Sbjct: 5 IGERKLEHIDIILKENIDFPDHCSKIYDSIMLIHQAFPKINLEEVDLRIDFLGYTINAPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFE-LRQYAP 115 +I+ MTGG+ + +IN LA A++ +A+ VGSQR M + + +++++ +R+ A Sbjct: 65 MITGMTGGHRNVT-KINEKLARLAQELGIAIGVGSQRPMIIYRDNSDVLETYKIVRKTAQ 123 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSK 174 +I N+G +N D + + + AD L +HLNP QE+IQP G+T F+ ++ K Sbjct: 124 DVPVIGNIGINTIN-DLSINDIEFLIKSIEADALAIHLNPAQEVIQPEGDTRFSDNVIVK 182 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR----DL 230 + + ++DVP+++KEVG G+S L GIRYFDI+G GT+W +E +R + Sbjct: 183 VEEILDSIDVPVIIKEVGNGISMETASLFRSIGIRYFDISGSCGTNWILVEKYRSRTPEY 242 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + I + WGIPTPL++ R ++ IASGG+ +G+ +KS++LGA + GLA P Sbjct: 243 KKRIADILNKWGIPTPLAIIETRNAAPDSFIIASGGVWDGLKAVKSLVLGADMVGLAKPI 302 Query: 291 LKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + D + + + +FL+G K E ++ Sbjct: 303 IYLLIKQGYDEAYKFLFTYIETIRTVLFLIGAKNPSETRDKPVVL 347 >gi|304321789|ref|YP_003855432.1| isopentenyl pyrophosphate isomerase [Parvularcula bermudensis HTCC2503] gi|303300691|gb|ADM10290.1| isopentenyl pyrophosphate isomerase [Parvularcula bermudensis HTCC2503] Length = 343 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 124/335 (37%), Positives = 185/335 (55%), Gaps = 5/335 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+ +V + D G + + ALPEI + VD S LG L+ PL+ Sbjct: 8 IVSRKRDHLAVVLERDVGFGGLTTGLEKIRFMPNALPEIDYRAVDLSTTLLGIPLAAPLI 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 I+SMTGG K IN +L AA +AMAVGSQRV D S LR+ AP+ L Sbjct: 68 INSMTGGPEKAAT-INLHLTEAAAHLGIAMAVGSQRVALEDKGQSGFSPALRRAAPNIPL 126 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGA Q+ GV +A A+ ++ ADGLF+HLNP+QE IQ G+T++ + S + L Sbjct: 127 FANLGAAQIRGPKGVDRARAALDMIAADGLFIHLNPVQEAIQNGGDTDWTGVISGLERLV 186 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-SDIGIVF 238 SA +P+ +KEVG GLS + ++ G+R D+AG GGT+W+R+E R+ + +F Sbjct: 187 SA-GIPIAVKEVGFGLSPNVVRRLVEIGVRIIDVAGAGGTNWARVEGFREGHLAQRAALF 245 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 +WG+PT ++ AR I SGG++ D+ ++ LGA L G A+ L A++S+ Sbjct: 246 TEWGLPTASAIRHARAIAPSTMLIGSGGIKTAHDVAAALRLGADLVGQAAASLSAALEST 305 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +AVVA + + + F G+ + L + Sbjct: 306 EAVVAHFQEIIEGLRTICFATGSADIASLKSAPLI 340 >gi|118465531|ref|YP_883056.1| isopentenyl pyrophosphate isomerase [Mycobacterium avium 104] gi|118166818|gb|ABK67715.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium avium 104] Length = 344 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 173/335 (51%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ DP D D + L + AL + S ++D S F G L P+L Sbjct: 4 MTHRKRRHIDVCLSDPVEFDGVTTGLDRYRLPYHALTQTSLGDIDVSTSFFGANLRAPIL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG M + INRNLA AA++ + M +GSQR+M A SF +R AP Sbjct: 64 IGAMTGGAE-MSKTINRNLAAAAQQLGIGMMLGSQRIMLDSALGERAADSFAVRDVAPDV 122 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+G QL V +A+ +GAD L +H NPLQE +Q NG+T+F+ S++ Sbjct: 123 LLFGNIGLSQLAKTA-VPHLVKALDRVGADALAVHTNPLQEAMQHNGDTDFSGSLSRLRE 181 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKS----GIRYFDIAGRGGTSWSRIESHRDLESD 233 ++A+D P+LLKEVG G+ + + D+AG GGTSWSR+E Sbjct: 182 AAAALDYPVLLKEVGHGIGGAAAAELVGGEGQPPVAGIDVAGAGGTSWSRVEQFVRYGEL 241 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWG+PT ++ R E +ASGG+R G+D K+I LGA + +A P L Sbjct: 242 RYPDLADWGVPTARAIVEVRRLLPEIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPA 301 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++SS AVV + E V + G + L Sbjct: 302 AIESSAAVVDWLRPFIDELRVCLHGCGVADLAGLR 336 >gi|257867119|ref|ZP_05646772.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC30] gi|257873454|ref|ZP_05653107.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC10] gi|257801175|gb|EEV30105.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC30] gi|257807618|gb|EEV36440.1| isopentenyl-diphosphate delta-isomerase [Enterococcus casseliflavus EC10] Length = 346 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 98/335 (29%), Positives = 174/335 (51%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+++ N FD L+H++ P+I +V + + S P I++ Sbjct: 2 NRKDEHVSLAKAFHKEHSND--FDAVRLVHQSFPQIDVADVSIATTVFDRSFSSPFFINA 59 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISN 122 MTGG+ K + +IN+ LA A+ + MA GS D + SF +R+ P L++N Sbjct: 60 MTGGSEKTL-KINQELAEIAQACDLMMATGSVSAALKDPSVADSFRIVRKANPDGFLLAN 118 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +GA ++ A +AV + GAD L +HLN QE++ P G+ F+ S + +++ Sbjct: 119 IGA-----GSPIENAQRAVELFGADALQIHLNAPQELVMPEGDRQFSQWLSLLEKTMASV 173 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S I+ L G++ D+AG GGTS+++IE+ R + ++ +G Sbjct: 174 AVPVVVKEVGFGMSRETIQQLLAIGVQTIDVAGSGGTSFTQIENARRKKRELA-YLDTFG 232 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T +SL A IASGG+R+ DI K++ LGA+ GL++ L + + Sbjct: 233 QSTVISLLEANELQQPFTRIASGGVRDAYDIFKALCLGANSVGLSATILVLLLSKGKEET 292 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A ++S +++ + + G ++L + Sbjct: 293 IATLQSWKEQLQLLYTMAGQTSTKDLTKVQLIFSG 327 >gi|216264200|ref|ZP_03436192.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 156a] gi|215980673|gb|EEC21480.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 156a] Length = 354 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 176/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGSCNFLKFVKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F IK F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPECIKDFALKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGVSYIDLAGSGGTNWVLVEGMKGNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSIFTLLSV-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFGLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|259047798|ref|ZP_05738199.1| isopentenyl-diphosphate delta-isomerase [Granulicatella adiacens ATCC 49175] gi|259035475|gb|EEW36730.1| isopentenyl-diphosphate delta-isomerase [Granulicatella adiacens ATCC 49175] Length = 354 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 13/334 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +H+ + F + +H + +V + G + P I++ Sbjct: 10 NRKDEHVGHANQQYRATS-APEFVETRFVHHPFTTVDVADVSLQTKIAGLTFNVPFFINA 68 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 +TGG+ + +N+ LAI A +T +AMA GS + + +SF++ RQ P+ +L +N Sbjct: 69 ITGGSP-LTTALNQRLAILARETGMAMATGSMSIAMKFPESTQSFKVIRQENPNGILFAN 127 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA + + A +AV ++ A+ + +H+N QE++ P G+ F++ I + A Sbjct: 128 LGA-----HYNAEAAKRAVDIIEANAIQIHVNRAQELVMPEGDRVFSNWLKNIEEIVKAS 182 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G S I G+ DI+G GGT++++IE+ R E + +DWG Sbjct: 183 AVPVIVKEVGFGFSREAIAQLESIGVSAIDISGTGGTNFAKIENGRRKEDKLDF-LEDWG 241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--MDSSDA 300 T SL A+ + IASGG++ +D+ K LGASL GL+ L DS Sbjct: 242 QTTLTSLMEAQE--SRTPIIASGGVKTPMDMAKCFALGASLVGLSGEMLHLVRKDDSLPD 299 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +++ +++ + L+G + L ++ Sbjct: 300 AITTVQTWKEQLTTILTLVGADSISSLQQAPIVV 333 >gi|323339817|ref|ZP_08080086.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus ruminis ATCC 25644] gi|323092690|gb|EFZ35293.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus ruminis ATCC 25644] Length = 350 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 117/340 (34%), Positives = 184/340 (54%), Gaps = 13/340 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ I K + LI LPEIS DE+ S GKKL P I+ Sbjct: 11 SHRKDEHVMIAEKLYRQKS-TNGLERIRLIPANLPEISLDEISLSTTLAGKKLEAPFFIN 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 ++TGG+ + + +N +LA A KT VAMAVGSQ V + K FE LR+ P+ ++++ Sbjct: 70 AITGGS-QTTDALNESLARVANKTGVAMAVGSQSVAVKNAAYAKGFERLRRLNPNGIMLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA + + A +A ++ AD + +HLN QE++ P G+ F + L+ Sbjct: 129 NLGA-----NHPFENAERACSMIDADIIEIHLNAAQELVMPEGDAEFY-WLENLKRLNEK 182 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPLL+KEVG G++ ++L ++G Y D+AG GGT+++ IE+ R + Q+ Sbjct: 183 LQVPLLVKEVGTGMTPQTLKLLAENGFSYVDLAGAGGTNFAAIENERRKNKETLAFMQEL 242 Query: 242 GIPTPLSLEMARPYCNE---AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 G+ T SL A+ + NE + ASGG+R+ DI+K ++LGA G++ FL + D Sbjct: 243 GLTTAESLLGAQKHRNELGRLKLTASGGIRDAQDIVKCLVLGAENVGISGMFLHVLLKDG 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 D + A IE L+ M LLG +++ EL ++ + Sbjct: 303 EDGLAAKIEDLKTGIRALMALLGCRKISELKDVQRILDLE 342 >gi|225548916|ref|ZP_03769893.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 94a] gi|225370519|gb|EEG99955.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 94a] Length = 354 Score = 324 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 174/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFNLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|153006919|ref|YP_001381244.1| isopentenyl pyrophosphate isomerase [Anaeromyxobacter sp. Fw109-5] gi|152030492|gb|ABS28260.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaeromyxobacter sp. Fw109-5] Length = 350 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 182/337 (54%), Gaps = 7/337 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK H+ + ++ F H ALPE+ V E LGKKL+ P+ Sbjct: 3 IAERKDSHLALCLEEQVELPGGDATGFGALRFDHDALPEVDLAAVRTETELLGKKLAAPI 62 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT-V 118 ++ +MTGG + E +NR LA AAE+ VA A+GSQR M D + S+ +R AP + Sbjct: 63 VVGAMTGGTARAGE-MNRRLARAAERCGVAFALGSQRRMLQDPASRDSYAVRAAAPELRL 121 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L NLGAVQLNY GV + V +GAD HLNPLQE IQP G+T FA L K+A + Sbjct: 122 LFGNLGAVQLNYGVGVAELRALVRDVGADAFNFHLNPLQEAIQPEGDTRFAALLPKLAAV 181 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIG 235 + VP+LLKE+G G+S + + G GGTSW+++ES R + +G Sbjct: 182 IPELGVPVLLKEIGAGISRTTARKIAALPVAGVETGGLGGTSWAKVESLRAADPARKSLG 241 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 F WGIPT S+ R + +ASGG+RNG++I K++ LGA LA P LK A Sbjct: 242 EAFARWGIPTVESIAACRQALPDRVVVASGGIRNGIEIAKALALGADAVALALPLLKAAE 301 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 S +A ++ L +E ++MFL G RV EL Sbjct: 302 QSWEAAAEELDRLVQELRLAMFLTGCARVSELRARPL 338 >gi|312147969|gb|ADQ30628.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi JD1] Length = 354 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 245 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFGLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|300859988|ref|ZP_07106076.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TUSoD Ef11] gi|300850806|gb|EFK78555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Enterococcus faecalis TUSoD Ef11] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 94/310 (30%), Positives = 176/310 (56%), Gaps = 10/310 (3%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV 88 +H++ E + +EVD S FL +L P +++MTGG+ + E IN+ L I A++T + Sbjct: 1 MRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAMTGGSQRAKE-INQQLGIIAKETGL 59 Query: 89 AMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 +A GS D + ++++ R+ P ++ +N+GA GV++A +A+ + A+ Sbjct: 60 LVATGSVSAALKDASLADTYQIMRKENPDGLIFANIGA-----GLGVEEAKRALDLFQAN 114 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 L +H+N QE++ P G+ +F + +KI + A++VP+++KEVG G+S +E G Sbjct: 115 ALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVKEVGFGMSQETLEKLTSIG 174 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ D++G+GGTS+++IE+ R + ++ DWG T +SL ++ + + + SGG+ Sbjct: 175 VQAADVSGQGGTSFTQIENARRKKRELSF-LDDWGQSTVISLLESQNWQKKLTILGSGGV 233 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAM--DSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 RN +DI+K + LGA G+A L M + + +A ++ ++E + LLG K + Sbjct: 234 RNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQWQEEVKMLYTLLGKKTTE 293 Query: 326 ELYLNTALIR 335 EL ++ Sbjct: 294 ELTSTALVLD 303 >gi|229824270|ref|ZP_04450339.1| hypothetical protein GCWU000282_01575 [Catonella morbi ATCC 51271] gi|229786243|gb|EEP22357.1| hypothetical protein GCWU000282_01575 [Catonella morbi ATCC 51271] Length = 357 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 179/338 (52%), Gaps = 9/338 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+++ + FD +H L +S DE+D + ++ G +FP Sbjct: 6 LMAHRKADHLHLALAQQAGVQTASCFDQLRFVHHPLALLSQDEIDLTTQWAGHTHAFPFY 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K+ + N LAI A +T +A+A GS M D S+++ RQ P + Sbjct: 66 INAMTGGS-KLTGQYNEQLAIVARETGLALAAGSASAMVKDPTVATSYQVMRQVNPDGFI 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA ++ A + + +GA+ L +HLN QE++ P G+ +F+ +I L Sbjct: 125 LANLGA-----HHSLESAQRVLEAMGANALQIHLNRPQEVVMPEGDRDFSQWLKQIERLV 179 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +D P+++KEVG G+S + + G++ D++GRGGT++ +IE R ++Q Sbjct: 180 NGLDCPVIIKEVGFGMSQQTLRCLAEVGVKTVDVSGRGGTNFIQIEDQRHETLQFQALYQ 239 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 +G T SL AR E + +ASGG+ VDI+KS+ +GA GLA FL + Sbjct: 240 -YGQTTAESLLEARVAPIELEILASGGIHQPVDIIKSLAMGARAVGLAGFFLHYLENKGL 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 DA + + + +++ LLG + QEL ++ Sbjct: 299 DATIEKVRAWQEQLRQLYLLLGARDWQELQTTDLILTG 336 >gi|116492689|ref|YP_804424.1| isopentenyl pyrophosphate isomerase [Pediococcus pentosaceus ATCC 25745] gi|116102839|gb|ABJ67982.1| isopentenyl-diphosphate delta-isomerase [Pediococcus pentosaceus ATCC 25745] Length = 327 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 112/333 (33%), Positives = 172/333 (51%), Gaps = 13/333 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +HI++ K FD L+ ALPE EV G K+ P I Sbjct: 6 SHRKDEHISLAEKFYSPTA-SAGFDTIRLLPNALPETGISEVSLETTLAGLKMPLPFFIQ 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ ++N LA A++T +AMAVGSQ V +F+ +R+ P ++++ Sbjct: 65 AMTGGS-AYTAKLNARLAKIAQETDLAMAVGSQSVALKYPELADTFKIVRETNPQGLIMA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D V KA AV +L A+ L LH+N QE++ P G+ F D IA + S Sbjct: 124 NVGA-----DASVAKAQAAVDMLQANALQLHINVAQELVMPEGDRTF-DYLDHIAEIVSN 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++K VG G++ D K G+++ D+ GRGGT++ +IE+ R D + + Sbjct: 178 LKVPVIVKAVGAGMTHQDALALKKVGVKFIDVGGRGGTNFIQIENARRHTKDFDFM-TSF 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA- 300 G+ T SL+ + A+GG+RN DI+KS+ LGA G+A FL + DA Sbjct: 237 GLTTVESLKSI--TVDGLSITATGGIRNSSDIIKSLALGADNVGIAGYFLHQLLHHDDAF 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +V IE ++ + + LLG K + EL Sbjct: 295 MVEMIEQMKYQLKSLLVLLGVKSINELSEKNLF 327 >gi|262196596|ref|YP_003267805.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haliangium ochraceum DSM 14365] gi|262079943|gb|ACY15912.1| isopentenyl-diphosphate delta-isomerase, type 2 [Haliangium ochraceum DSM 14365] Length = 354 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 121/337 (35%), Positives = 171/337 (50%), Gaps = 10/337 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DHI + +R ++ L+H+ALPE++ DE+D G L P++ Sbjct: 6 ISQRKSDHIEVAASGQADFERRTTLLEEVQLVHQALPELAVDEIDLHTTLCGLPLRAPVV 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS MTGG + INR+LA AAE V VGSQR M +F +R AP VLI Sbjct: 66 ISGMTGGTAEAAA-INRDLARAAEGAGVGFGVGSQRAMALHPELEDTFRVRDVAPDVVLI 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G VQ + GV K + + A+ + +HLNP E+IQ +G+ +F +A L Sbjct: 125 GNIGVVQ-AREMGVAKVAELAKRIEANAMAVHLNPAMELIQGDGDRDFRGAIDTVAALVD 183 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE----SDIGI 236 A+ VP++ KE GCGLS K G+R D++G GGTSW +E+ R E +G Sbjct: 184 ALRVPVIAKETGCGLSPQAAAALAKVGVRTVDVSGAGGTSWVAVEARRAAEGSAAQRLGQ 243 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-M 295 DWGIPT +S A + + IA+GGLR+G DI ++I LGA GGLA+P L+ Sbjct: 244 ELWDWGIPTAVS--TAACAAHGLEVIATGGLRSGHDIARAIALGARCGGLAAPVLRAQRA 301 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + A + L + L G L Sbjct: 302 GGYEGAAAYVGELVASLRSVLLLCGCADPGALAHAPR 338 >gi|325849560|ref|ZP_08170798.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480041|gb|EGC83118.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 338 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 106/334 (31%), Positives = 178/334 (53%), Gaps = 10/334 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + R+K ++ ++ H AL +++FDE+D S+EF+GKK+S P+++++M Sbjct: 8 RKDEHIENYLRSEF--RSKTLLNNIYVEHNALSKVNFDEIDTSIEFMGKKISMPVMVNAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + E IN +L+ + MAVGS+ + D A +SF L + + I NLG Sbjct: 66 TGGTE-ISEDINEDLSNICADLNIPMAVGSESIALKDIKARESFSLLKDKNNVFKIGNLG 124 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++ ++ A ++GA + HLN QE++ G +F++ + + + Sbjct: 125 -----FENSLENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFSNNFENLKNIRKNLSA 179 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL++KEVG G+S + L G+ Y D+AG+GGT++ IE R + D F WGIP Sbjct: 180 PLIVKEVGFGMSKEVGKKLLDIGVEYIDVAGKGGTNFIEIEDMRIFDKDYSE-FYSWGIP 238 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVA 303 T S+ R ++ I+SGG+RN D+ KSII+GA + ++ L + D Sbjct: 239 TAKSILDLRSLSDDFFLISSGGIRNATDVCKSIIIGADMCAISGEVLSFLLRGDYDYAQK 298 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +E L+ + + M L+G K ++EL I + Sbjct: 299 YLEELQTKIKIFMALVGAKNIEELKKVPYKITGR 332 >gi|224532402|ref|ZP_03673032.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi WI91-23] gi|224512709|gb|EEF83080.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi WI91-23] Length = 354 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 174/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKSSCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ M +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPMGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 245 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 337 >gi|184153514|ref|YP_001841855.1| isopentenyl pyrophosphate isomerase [Lactobacillus reuteri JCM 1112] gi|227364570|ref|ZP_03848631.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri MM2-3] gi|325682315|ref|ZP_08161832.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri MM4-1A] gi|226707319|sp|B2G7E3|IDI2_LACRJ RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183224858|dbj|BAG25375.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri JCM 1112] gi|227070407|gb|EEI08769.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri MM2-3] gi|324978154|gb|EGC15104.1| isopentenyl diphosphate isomerase [Lactobacillus reuteri MM4-1A] Length = 348 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 12/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLI 61 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I Sbjct: 7 AQRKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+++ + +INR LA A K +AMA GS ++ D + SFE+ R+ P ++ Sbjct: 67 EAMTGGSDQAL-KINRQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL A + + +A A+ +L A+ L LH+N QE+I P G+ +F + I L S Sbjct: 126 ANLSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDF-NWLDNIQYLVS 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + D Sbjct: 180 ELEVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINF-ESLLD 238 Query: 241 WGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 WG TP SL A + + IASGG+ + +D++K+ +LGA G+A FL + Sbjct: 239 WGQTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFLNILQNEGY 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + + + LLG EL ++ Sbjct: 299 EALDQTLGEWQVIVKRLLALLGCSSFTELSRVEYVL 334 >gi|134298349|ref|YP_001111845.1| isopentenyl pyrophosphate isomerase [Desulfotomaculum reducens MI-1] gi|134051049|gb|ABO49020.1| isopentenyl-diphosphate delta-isomerase [Desulfotomaculum reducens MI-1] Length = 352 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 123/339 (36%), Positives = 191/339 (56%), Gaps = 14/339 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK++HI + FDD L+H +LP++ + ++D S FLGKKL PLL Sbjct: 1 MRLNRKLEHIQFSLQQKS-RGGATGFDDITLLHNSLPQLDWGDIDTSCYFLGKKLHVPLL 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +E IN NLA AA VA+AVGSQR D++ SF + R+ P V+ Sbjct: 60 INAMTGGH-RELESINGNLAKAAAAAGVALAVGSQRAALEDNSTRYSFSVVREVNPQGVV 118 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++NLGA D + +A A+ ++ ADG+ LHLN QE+ G+ F + I LS Sbjct: 119 LANLGA-----DCSLLEARTAIKMINADGIQLHLNAPQELAMAEGDRKFKGILENIQSLS 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +DVP+++KEVG G+S I+ + + Y D+ G GGT + IE R + Sbjct: 174 RDLDVPVIVKEVGFGMSRESIQRIGAASVPYIDVGGAGGTDFVAIEEARAGRK----TWL 229 Query: 240 DWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS- 297 WGIPT +SL + Q IASGG+RN +DI+KS+ LG SL G+A P L+ ++ Sbjct: 230 KWGIPTAVSLLEGLSMNRAKTQLIASGGIRNALDIVKSLSLGCSLVGMARPLLRVLVEGS 289 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 S+ + + + ++ ++ M +LG + +++L +I Sbjct: 290 SEELNSYLSNIIEDIHRIMLMLGARTLEDLQRVPLIISG 328 >gi|221217848|ref|ZP_03589315.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 72a] gi|224533344|ref|ZP_03673938.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi CA-11.2a] gi|225549978|ref|ZP_03770939.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 118a] gi|221192154|gb|EEE18374.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 72a] gi|224513509|gb|EEF83866.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi CA-11.2a] gi|225369437|gb|EEG98889.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 118a] Length = 354 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 175/334 (52%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G+ Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGVSYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ DS + A Sbjct: 245 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFNLFSDYEHVLKMSMFLSGSKSLLEFRNNKYFL 337 >gi|41409177|ref|NP_962013.1| isopentenyl pyrophosphate isomerase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397997|gb|AAS05627.1| hypothetical protein MAP_3079c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 344 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 119/335 (35%), Positives = 172/335 (51%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK HI++ DP D D + L + AL + S +++ S F G L P+L Sbjct: 4 MTHRKRRHIDVCLSDPVEFDGVTTGLDRYRLPYHALTQTSLGDINVSTSFFGANLRAPIL 63 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG M + INRNLA AA++ + M +GSQR+M A SF +R AP Sbjct: 64 IGAMTGGAE-MSKTINRNLAAAAQQLGIGMMLGSQRIMLDTALGERAADSFAVRDVAPDV 122 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +L N+G QL V +A+ +GAD L +H NPLQE +Q NG+T+F+ S++ Sbjct: 123 LLFGNIGLSQLAKTA-VPHLVKALDRVGADALAVHTNPLQEAMQHNGDTDFSGSLSRLRE 181 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKS----GIRYFDIAGRGGTSWSRIESHRDLESD 233 ++A+D P+LLKEVG G+ + + D+AG GGTSWSR+E Sbjct: 182 AAAALDYPVLLKEVGHGIGGAAAAELVGGEGQPPVAGIDVAGAGGTSWSRVEQFVRYGEL 241 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWG+PT ++ R +ASGG+R G+D K+I LGA + +A P L Sbjct: 242 RYPDLADWGVPTARAIVEVRRLLPGIPLVASGGIRTGMDAAKAIALGADVVAVARPLLPA 301 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++SS AVV +E V + G + L Sbjct: 302 AIESSAAVVDWLEPFIDGLRVCLHGCGVADLAGLR 336 >gi|325478964|gb|EGC82066.1| isopentenyl-diphosphate delta-isomerase, type 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 337 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 187/341 (54%), Gaps = 14/341 (4%) Query: 1 MVN---DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF 57 M+ +RK HI K + +D ++ H+AL +I+ DE+D S+EFLG+K++ Sbjct: 1 MIEKRRERKDQHIENYLKSQSL--TNNLLEDIYIEHKALSDIAIDEIDTSIEFLGRKIAM 58 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 P+++++MTGG IN +L+ E + MAVGS+ + D + +SF L + Sbjct: 59 PIMVNAMTGGGE-AGADINEDLSSICESLNIPMAVGSEAIAIDDEESRESFTLLKD-KDL 116 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + + NLG+ + ++ A ++GAD + +HLN QE++ P G+ +F + I Sbjct: 117 IKVGNLGS-----ERSIEDFTFAADLIGADIMQVHLNMAQELVMPEGDKDFRGIRDNIKN 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 LS P+++KE G G+S + + G++Y D++G+GGT++ IE RD+++D + Sbjct: 172 LSENFATPIIVKETGAGISKEVAKDLIDLGVKYIDVSGKGGTNFIEIEDLRDMDTDFSEL 231 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 + +WGIPT ++ R + IASGGLRN +D++KSII+GA + ++ LK + Sbjct: 232 Y-NWGIPTAKAIIDVRSISRDVFIIASGGLRNAMDVVKSIIIGADMAAVSGEVLKYLLHG 290 Query: 298 SD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + ++ L + + M LLG K ++EL I + Sbjct: 291 GYMACESYLKDLNDKIKIIMCLLGVKNIEELKKVDYKIVGR 331 >gi|183984780|ref|YP_001853071.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium marinum M] gi|226707320|sp|B2HGA4|IDI2_MYCMM RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|183178106|gb|ACC43216.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium marinum M] Length = 348 Score = 322 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 114/335 (34%), Positives = 171/335 (51%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK HI++ D + + L AL + S ++D S EF G L P+L Sbjct: 8 ISSRKRRHIDVCLNDEVNYVGVTTGLERYRLPFNALTQTSLADIDLSAEFFGAPLRAPVL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG + INRNLA AA++ + M +GSQR+M D A SF +R+ AP Sbjct: 68 IGAMTGGAE-LSATINRNLATAAQRLGIGMMLGSQRIMLDDARGQRAASSFAVREVAPDV 126 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +LI N+G QL A+ +GA+ L +H N LQE +Q G+T+F+ ++ Sbjct: 127 LLIGNIGLAQLTKAAVP-AVAAALRRVGANALAVHANSLQEAMQHGGDTDFSGSLGRLRD 185 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSG----IRYFDIAGRGGTSWSRIESHRDLESD 233 + +D P+LLKEVG G+ + + L+ + D+AG GGTSWSR+E Sbjct: 186 AADLLDYPVLLKEVGHGIGAAAVAQLLRLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGEL 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R +ASGG+R G+D K+I LGA + +A P L P Sbjct: 246 RYPELADWGIPTAEAIVEVRQALPAVPLVASGGIRTGMDAAKAIALGADVVAIARPLLAP 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++S+ AV ++ E V + G + + L Sbjct: 306 AIESATAVQGWLQLFLDELRVCLHCCGARDLTSLR 340 >gi|108762094|ref|YP_633176.1| isopentenyl pyrophosphate isomerase [Myxococcus xanthus DK 1622] gi|108465974|gb|ABF91159.1| isopentenyl-diphosphate delta-isomerase, type 2 [Myxococcus xanthus DK 1622] Length = 352 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 120/342 (35%), Positives = 178/342 (52%), Gaps = 7/342 (2%) Query: 1 MVNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK H+++ D N + L+H A+PE+S ++VD S FLGK+L +PL Sbjct: 5 ITARRKDAHLDLCSTGDVEPSGNSTLLECVKLVHCAMPEMSVEDVDLSTAFLGKRLRYPL 64 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 L++ MTGG + +NR+LA+ AE+ +A VGSQR M D + SF++RQ AP L Sbjct: 65 LVTGMTGGTERA-GAVNRDLALLAERHGLAFGVGSQRAMSEDASRAASFQVRQVAPTVAL 123 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+G Q GV + V +GADGL LHLN QE+ QP G+ +F + LL Sbjct: 124 LGNIGMFQ-AIGLGVDGTRRLVDGIGADGLALHLNAGQELTQPEGDRDFQGGYRVVELLV 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD--LESDIGIV 237 A LL+KE GCG+ + G+R D++G GGTSW R+E R +++ +G Sbjct: 183 KAFGDRLLVKETGCGIGPDVARRLVDLGVRNIDVSGLGGTSWVRVEQLRASGVQAQLGAE 242 Query: 238 FQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 F WGIPT +L R + +ASGGLR G+D K + LGA+L G+A P + Sbjct: 243 FSAWGIPTAAALASVRRAVGPDVHLVASGGLRTGLDAAKVLALGANLAGMALPLFRAQQA 302 Query: 297 SSDAVVAAIESLR-KEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + ++ L G++ EL ++ + Sbjct: 303 GGLEAAEAALEVILASLRQALVLTGSRSCAELRQRPRVVTGE 344 >gi|194468006|ref|ZP_03073992.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri 100-23] gi|194452859|gb|EDX41757.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri 100-23] Length = 347 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 12/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLI 61 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I Sbjct: 6 AQRKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYI 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+++ + +IN+ LA A K +AMA GS ++ D + SFE+ R+ P ++ Sbjct: 66 EAMTGGSDQAL-KINQQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIF 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL A + + +A A+ +L A+ L LH+N QE+I P G+ +F + I L S Sbjct: 125 ANLSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDF-NWLDNIQYLVS 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + D Sbjct: 179 ELEVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINF-ESLLD 237 Query: 241 WGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 WG TP SL A + + IASGG+ + +D++K+ +LGA G+A FL + Sbjct: 238 WGQTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFLNILQNEGY 297 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + R + LLG EL ++ Sbjct: 298 EALDQTLGEWRVIVKRLLALLGCSSFTELSRVEYVL 333 >gi|296243112|ref|YP_003650599.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosphaera aggregans DSM 11486] gi|296095696|gb|ADG91647.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosphaera aggregans DSM 11486] Length = 370 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 118/342 (34%), Positives = 196/342 (57%), Gaps = 14/342 (4%) Query: 5 RKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RKI H+ IV DR +++F D LIH+A+P D+VD S FLG +L P++I+ Sbjct: 7 RKIQHLEIVVNRDVDFKDRCEEYFRDIILIHQAIPGFRRDDVDTSTRFLGYELKAPVMIT 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS---DHNAIKSFEL-RQYAPHTV 118 +TGG + ++ +NR LA A + +A+ +GSQR + + + ++++ + R AP+ Sbjct: 67 GITGGARETLD-VNRRLAQIASQHGIALGLGSQRPILTSNFNREVVETYRVARDTAPNIP 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIAL 177 LI N+G L GVQ+ Q V + AD L +HLNP QE IQP G+T+F+ + S + Sbjct: 126 LIGNIGFNTLKT-LGVQEVKQLVDSVRADALAVHLNPAQEAIQPEGDTDFSLETLSVLRE 184 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELG-LKSGIRYFDIAGRGGTSWSRIESHR---DLESD 233 ++ + VP+L+KEVG GLS + ++G++ FD+AG GTSW ++E +R D+ Sbjct: 185 VAREVGVPILVKEVGNGLSYEVVRKITAETGVKIFDVAGACGTSWVKVEMYRTADDVRKH 244 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 + V +WGIPTP+S+ R ++ IASGG+ +G+ +KS+ LGA + G A P L + Sbjct: 245 VAQVIGEWGIPTPVSIIETRLASPDSTIIASGGVWDGLRAVKSLALGADMAGFAKPVLTR 304 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + ++ + + MFL+G +++ +L ++ Sbjct: 305 LLKEGFESASRFVAEYVESMKTVMFLVGAEKLGDLRRIPVVV 346 >gi|218884667|ref|YP_002429049.1| isopentenyl pyrophosphate isomerase [Desulfurococcus kamchatkensis 1221n] gi|218766283|gb|ACL11682.1| isopentenyl-diphosphate delta-isomerase [Desulfurococcus kamchatkensis 1221n] Length = 390 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 191/348 (54%), Gaps = 14/348 (4%) Query: 2 VNDRKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + +RK+ HI + D + + + L+H+ALP + FDEVD FLG +L P+ Sbjct: 22 IQNRKLHHIRLALDPRVDFKDHCSEIYREIQLVHQALPGLDFDEVDVKQVFLGYRLEAPI 81 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFE-LRQYAP 115 +I+ MTGG+ ++ IN+ LA AEK +VA+ VGSQR + + + S+ +R+ A Sbjct: 82 MITGMTGGHPSLV-SINKMLATLAEKKRVAIGVGSQRAIVKSNFSEDVVASYRIVRETAR 140 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSK 174 +I N+G L D + V V+ AD + +HLNP QE+IQP G+T F+ D+ K Sbjct: 141 SVPVIGNIGLNTLR-DIDTDTVIRLVEVIDADAIAIHLNPAQEVIQPEGDTRFSLDVIDK 199 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL---- 230 + L +++ P+++KEVG GLS + + G++ +D AG GT+W+ +E+ R+ Sbjct: 200 VKELVASLRKPVIIKEVGNGLSMETVRIFHNIGVKIYDTAGACGTNWALVETLRNQPGSS 259 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+ +WGIPTPLS+ R ++ IASGG+ +G +I +GA + G+A P Sbjct: 260 RYECGLKLSEWGIPTPLSVIETRYVAEDSFIIASGGVWDGFKAAVNIAIGADMVGVAKPI 319 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 LK + + A +++ E +MFL G + + EL ++ + Sbjct: 320 LKNILDNGLERAEAYLDNYIFELKTAMFLSGARNIGELRSKPIILGQK 367 >gi|256545618|ref|ZP_05472976.1| isopentenyl diphosphate isomerase [Anaerococcus vaginalis ATCC 51170] gi|256398695|gb|EEU12314.1| isopentenyl diphosphate isomerase [Anaerococcus vaginalis ATCC 51170] Length = 339 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 105/335 (31%), Positives = 183/335 (54%), Gaps = 11/335 (3%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK +HI + ++K ++ ++ H AL ++FDE+D S+EF+G K+S P+++++ Sbjct: 7 ERKDEHIENYLRSEF--KSKTLLNNVYVEHNALSNVNFDEIDTSIEFMGNKISMPVMVNA 64 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 MTGG + E IN +L+ + + MAVGS+ + D ++ +SF L + + + I NL Sbjct: 65 MTGGTE-ISEDINEDLSNICRELNIPMAVGSESIAIKDKDSRESFSLLKD-KNVIKIGNL 122 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G ++ ++ A ++GA + HLN QE++ G +F+ +A +S + Sbjct: 123 G-----WENKIENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFSKNFENLANISKNIS 177 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VPL++KEVG G+S + L GI+Y D+AG+GGT++ IE R + D F WGI Sbjct: 178 VPLIVKEVGFGISKEVGQKLLDIGIKYIDVAGKGGTNFIEIEDMRIFDKDYSE-FYSWGI 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 PT S+ R ++ IASGG+RN D+ KS+I+GA + ++ L + D + Sbjct: 237 PTAKSILDVRSLSDDFFLIASGGIRNSSDVCKSLIIGADMCAISGEVLSFLLRGDYDYAI 296 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ L + + M L+G K ++EL + + Sbjct: 297 KYLKELNTKIKIFMALVGVKNIEELKKVPYKLTGR 331 >gi|254496057|ref|ZP_05108958.1| isopentenyl pyrophosphate isomerase [Legionella drancourtii LLAP12] gi|254354699|gb|EET13333.1| isopentenyl pyrophosphate isomerase [Legionella drancourtii LLAP12] Length = 342 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 114/330 (34%), Positives = 168/330 (50%), Gaps = 7/330 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + + D HL+H ALP++ F E+ + GK + P LIS Sbjct: 9 EQRKQDHIKLSLMAENQTTDLSTLDTIHLVHDALPDLDFSEIIIAGTRFGKIVKKPFLIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-KSFELRQYAPHTVLIS 121 SMT G+ + + INR+L A ++ AM VGSQR +D A + LR+ P L S Sbjct: 69 SMTAGHRRA-KHINRHLVEACAQSGWAMGVGSQRRELTDPKAAFEWKHLRRDFPQVSLYS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG QL + + + L AD L +H NPLQE +QP G TN+ + + Sbjct: 128 NLGIAQL-INTPLADIQRLTDALQADALIIHCNPLQECMQPEGTTNYKGCWQALENVVET 186 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIV 237 + +P+++KE GCG S + GI DI G GGT W RIE HR + I I Sbjct: 187 LALPIIVKETGCGFSRNTMMHLNDIGIAAIDIGGLGGTHWGRIEGHRATQDSIRHQAAIT 246 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 F++WGI T ++ A + SGG+ NG++ K LGA+ G A P L+ A++S Sbjct: 247 FKNWGIDTATAVRNAAALKPSFEIWGSGGVLNGLNAAKLFALGATTVGYAKPMLEAALES 306 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ V + ++ E V+MF G++ + +L Sbjct: 307 AEHVHTKMLTIEYELKVAMFCTGSRVLDDL 336 >gi|118616239|ref|YP_904571.1| isopentenyl pyrophosphate isomerase [Mycobacterium ulcerans Agy99] gi|166226201|sp|A0PL81|IDI2_MYCUA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|118568349|gb|ABL03100.1| isopentenyl pyrophosphate isomerase type 2 Idi2 [Mycobacterium ulcerans Agy99] Length = 348 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 170/335 (50%), Gaps = 10/335 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK HI++ D + + L AL + S ++D S EF G L P+L Sbjct: 8 ISSRKRRHIDVCLNDEVNYVGVTTGLERYRLPFNALTQTSLADIDLSAEFFGAPLRAPVL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFELRQYAPHT 117 I +MTGG + INRNLA AA++ + M +GSQR+M D A SF +R+ AP Sbjct: 68 IGAMTGGAE-LSAMINRNLATAAQRLGIGMMLGSQRIMLDDARGQRAASSFAVREVAPDV 126 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +LI N+G QL A+ +GA+ L +H N LQE +Q G+T+F+ ++ Sbjct: 127 LLIGNIGLAQLTKAAVP-AVAAALRRVGANALAVHANSLQEAMQHGGDTDFSGSLGRLRD 185 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSG----IRYFDIAGRGGTSWSRIESHRDLESD 233 + +D P+LLKEVG G+ + + L+ + D+AG GGTSWSR+E Sbjct: 186 AADLLDYPVLLKEVGHGIGAAAVAQLLRLPGGLPVSGIDVAGAGGTSWSRVEQLVRYGEL 245 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 DWGIPT ++ R +ASGG+R G+D KSI LGA + +A P L P Sbjct: 246 RYPELADWGIPTAEAIVEVRQALPAVPLVASGGIRTGMDAAKSIALGADVVAIARPLLAP 305 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A++S+ AV ++ E V + G + L Sbjct: 306 AIESATAVQDWLQLFLDELRVCLHCCGAPDLTSLR 340 >gi|227544621|ref|ZP_03974670.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri CF48-3A] gi|300910249|ref|ZP_07127709.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri SD2112] gi|227185404|gb|EEI65475.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri CF48-3A] gi|300892897|gb|EFK86257.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus reuteri SD2112] Length = 348 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 179/336 (53%), Gaps = 12/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLI 61 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I Sbjct: 7 AQRKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+++ + ++N+ LA A K +AMA GS ++ D + SFE+ R+ P+ ++ Sbjct: 67 EAMTGGSDQAL-KVNQQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPNGIIF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL A + + +A A+ +L A+ L LH+N QE+I P G+ +F + I L S Sbjct: 126 ANLSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDF-NWLDNIQYLVS 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + D Sbjct: 180 ELEVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINF-ESLLD 238 Query: 241 WGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 WG TP SL A + + IASGG+ + +D++K+ +LGA G+A FL + Sbjct: 239 WGQTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFLNILQNEGY 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + + + LLG EL ++ Sbjct: 299 EALDQTLGEWQVIVKRLLALLGCSSFTELSRVEYVL 334 >gi|307610782|emb|CBX00395.1| hypothetical protein LPW_21151 [Legionella pneumophila 130b] Length = 322 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 115/318 (36%), Positives = 162/318 (50%), Gaps = 7/318 (2%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 FD + L+H ALP++ F ++ K + P +ISSMT G++ IE IN Sbjct: 4 NQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIISSMTAGHSNAIE-INY 62 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQK 136 L A KTK AM VGSQR +D A +E LR+ P L SNLG QL D + Sbjct: 63 RLMEACSKTKWAMGVGSQRRELTDKQAAFEWEPLRRDFPMVSLFSNLGIAQL-IDTPISA 121 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + L A+ L +H NPLQE IQP G TNF + + L ++ P+++KE GCG S Sbjct: 122 IQRLIDTLHAEALIIHCNPLQECIQPEGTTNFHGCWAALEALVKKINSPVIVKETGCGFS 181 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI----GIVFQDWGIPTPLSLEMA 252 + G+ D++G GGT W RIE HR + I F++WGI T S A Sbjct: 182 KNTLLRLNNIGVAAVDVSGVGGTHWGRIEGHRADKDPIRHRTADTFRNWGIDTLQSTRNA 241 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + SGG+RNG+D K LGA+ G A P L+ A+DS+D V+ + ++ E Sbjct: 242 ISLNPSFEIWGSGGVRNGLDAAKLFALGATTVGFAKPMLEAALDSTDQVLTQMNTIEYEL 301 Query: 313 IVSMFLLGTKRVQELYLN 330 +MF G+ + +L Sbjct: 302 KTAMFCTGSLVLDDLKEK 319 >gi|218249943|ref|YP_002375184.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi ZS7] gi|218165131|gb|ACK75192.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi ZS7] Length = 359 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 12 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L + Sbjct: 72 SSMTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 131 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 190 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 250 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 309 VFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 342 >gi|212695996|ref|ZP_03304124.1| hypothetical protein ANHYDRO_00532 [Anaerococcus hydrogenalis DSM 7454] gi|212676983|gb|EEB36590.1| hypothetical protein ANHYDRO_00532 [Anaerococcus hydrogenalis DSM 7454] Length = 338 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 107/334 (32%), Positives = 176/334 (52%), Gaps = 10/334 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +HI + R+K ++ ++ H AL +I+FDE+D S+EF+G+K+S P+++++M Sbjct: 8 RKDEHIENYLRSEF--RSKTLLNNIYVEHNALSKINFDEIDTSIEFMGRKISMPVMVNAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 TGG + E IN +L+ + MAVGS+ + D A +SF L + + I NLG Sbjct: 66 TGGTE-ISEDINEDLSNICADLNIPMAVGSESIALKDIKARESFSLLKDKNNVFKIGNLG 124 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + ++ A ++GA + HLN QE++ G +F + + + + Sbjct: 125 -----LENSLENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFLNNFENLKNIRKNLSA 179 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL++KEVG G+S + L GI Y D+AG+GGT++ IE R + D F WGIP Sbjct: 180 PLIVKEVGFGMSKEVGKKLLDIGIEYIDVAGKGGTNFIEIEDMRIFDKDYSE-FYSWGIP 238 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVA 303 T S+ R ++ I+SGG+RN D+ KSII+GA + ++ L + D Sbjct: 239 TAKSILDLRSLSDDFFLISSGGIRNATDVCKSIIIGADMCAISGEVLSFLLRGDYDYAQK 298 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +E L+ + + M L+G K ++EL I + Sbjct: 299 YLEELQTKIKIFMALVGAKNIEELKKVPYKITGR 332 >gi|223889428|ref|ZP_03624014.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 64b] gi|226321382|ref|ZP_03796909.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi Bol26] gi|13878541|sp|O51627|IDI2_BORBU RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|223885114|gb|EEF56218.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi 64b] gi|226233178|gb|EEH31930.1| isopentenyl-diphosphate delta-isomerase, type 2 [Borrelia burgdorferi Bol26] Length = 354 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 7 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L + Sbjct: 67 SSMTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 126 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 184 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 185 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 244 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 245 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 303 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 304 VFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 337 >gi|15595029|ref|NP_212818.1| isopentenyl pyrophosphate isomerase [Borrelia burgdorferi B31] gi|2688617|gb|AAC67033.1| carotenoid biosynthesis protein, putative [Borrelia burgdorferi B31] Length = 360 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 4/334 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K HI I + F L H AL + +F E++ E G +S P+ I Sbjct: 13 ILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFI 72 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG+ K N++L A K+ + +GS +++F I+ F L++YA + L + Sbjct: 73 SSMTGGS-KEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFA 131 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GAVQ+ +FG+ K + + L D + +HLN QE+++ +G+ NF + IA LS Sbjct: 132 NVGAVQI-VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGIRESIAKLSDF 190 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VPL++KE G G+S D++ G Y D+AG GGT+W +E + +I F DW Sbjct: 191 LSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNNLNIASCFSDW 250 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GIP+ +L +A ASGG G+DI K I LGA L G+A+ L+ D DA Sbjct: 251 GIPSVFTLLSI-DDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDA 309 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V +SMFL G+K + E N + Sbjct: 310 VFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFL 343 >gi|119953462|ref|YP_945671.1| isopentenyl pyrophosphate isomerase [Borrelia turicatae 91E135] gi|119862233|gb|AAX18001.1| isopentenyl-diphosphate delta-isomerase [Borrelia turicatae 91E135] Length = 359 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 175/336 (52%), Gaps = 4/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K I I + ++ + +L H AL E+ F E+D G ++ P+ I Sbjct: 12 ILNNKKRQIEICLDKEDVSKSDNLLNFVNLKHDALSELDFCEIDTRESIFGYDIAMPIFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG K ++N++L A ++ M++GS +++F IK F LR+YA + L S Sbjct: 72 SSMTGGV-KEGNKLNKSLVKIANDLRIPMSLGSFKLIFKYPEYIKDFYLRKYAHNIPLFS 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA QL +FG+ + + L D + +HLN QE++ G +F + IA + S Sbjct: 131 NIGATQLR-EFGIFEIIEMNKRLEVDAIIVHLNSGQELMNLRGERSFRGIKDSIARICSV 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P+++KE G G+S + L G+ Y D+AG GGT+W +E ++ DI F +W Sbjct: 190 SNIPVIVKETGFGISPDSVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENLDIASCFANW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GI + L+L + + + + ASGG G+DI K I LGA L G+A+ L+ + A Sbjct: 250 GISSVLTLLSIKDFFKD-KVFASGGYETGMDIAKGIALGAKLVGIAAAILRAFYAGGENA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ +SM L +K + + LN + H Sbjct: 309 LYNLLKGYEYVLKMSMLLSNSKDLAQFRLNKYFLSH 344 >gi|329769192|ref|ZP_08260612.1| isopentenyl-diphosphate delta-isomerase [Gemella sanguinis M325] gi|328839411|gb|EGF88989.1| isopentenyl-diphosphate delta-isomerase [Gemella sanguinis M325] Length = 317 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 19/325 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D D + + + ++P D +D S KK FP I+++ Sbjct: 2 RKKDHIRLALAD---KTTLTSLDAYAIDYNSVPRFGLDNLDTSTTICNKKWQFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G + +IN++ +E + GS D N ++ P Sbjct: 59 TAGGEE-CNKINQDFMEVSEACGIEFFPGSYSPALKDKNDEAAY------PKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++ L D A+ A + LH NPLQEI+ P G+ NF S + +S + Sbjct: 106 SINLGLDKDPNLILDAIEKTKAQYIQLHTNPLQEIVMPEGDHNFESWLSTLTEVSKKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + + D++G GGT+++RIE+ R + ++ G Sbjct: 166 PVILKETGFGMNEETIKLAIDLNLAAVDVSGMGGTNFARIENGRREDK--STYLENIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE A PY ++ IASGG+RN +D++K + LGA G++ FL+ + D +A++ Sbjct: 224 TAESLEFATPYRDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKTFLEILVNDGKEALID 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQELY 328 IE +KE M L+ K + ELY Sbjct: 284 EIEKWKKELKFLMILMNAKNIDELY 308 >gi|187918540|ref|YP_001884103.1| isopentenyl pyrophosphate isomerase [Borrelia hermsii DAH] gi|119861388|gb|AAX17183.1| isopentenyl-diphosphate delta-isomerase [Borrelia hermsii DAH] Length = 359 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 107/336 (31%), Positives = 176/336 (52%), Gaps = 4/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K I I + ++ + +L H AL E+ F E+D S G ++ P+ I Sbjct: 12 ILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESIFGYDIAMPIFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + ++N++L A ++ M +GS +++F IK F LR+ A + L S Sbjct: 72 SSMTGGIQE-GNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALRKCADNIPLFS 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA+QL +FG+ K + + L D + +HLN QE++ G+ NF + IA L A Sbjct: 131 NIGAIQLR-EFGIFKVIEIIKKLEVDAIIVHLNSGQELMNSRGDRNFKGIKDSIARLCDA 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P+++KE G G+S + L G+ Y D+AG GGT+W +E ++ ++ F +W Sbjct: 190 SNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENLNVASCFSNW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI + L+L + + + ASGG G+DI K I LGA L G+AS L+ DA Sbjct: 250 GISSVLTLLSIKDSFKD-RIFASGGYETGIDIAKGIALGAKLVGIASAILRAFYAGGEDA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++ +SM L +K + + LN + H Sbjct: 309 LYKLLKDYEYVLKMSMLLSNSKNLVQFRLNKYFLSH 344 >gi|148544141|ref|YP_001271511.1| isopentenyl pyrophosphate isomerase [Lactobacillus reuteri DSM 20016] gi|166918475|sp|A5VK00|IDI2_LACRD RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|148531175|gb|ABQ83174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus reuteri DSM 20016] Length = 348 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 12/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLI 61 RK +H+++ K +FD LIH +LPE++ D+VD V+ ++ P I Sbjct: 7 AQRKNEHLSLAAKYYDQVHQHHYFDQVRLIHDSLPEMTTDDVDLHVQLADNLEIECPFYI 66 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+++ + +INR LA A K +AMA GS ++ D + SFE+ R+ P ++ Sbjct: 67 EAMTGGSDQAL-KINRQLAQLAHKHHLAMATGSLSIISKDPQSFSSFEIIREENPDGIIF 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL A + + +A A+ +L A+ L LH+N QE+I P G+ +F + I L S Sbjct: 126 ANLSA-----NASLDQAINAISLLKANALELHINAAQELIMPEGDRDF-NWLDNIQYLVS 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++VP+++KEVG G+S I + +++GRGGT+++ IE+ R+ + + D Sbjct: 180 ELEVPVIVKEVGFGMSKTTIAKLQTHDVHLINVSGRGGTNFAAIENRRNHDINF-ESLLD 238 Query: 241 WGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 WG TP SL A + + IASGG+ + +D++K+ +LGA G+A FL + Sbjct: 239 WGQTTPESLLEAHSIRRGKTEIIASGGITSPLDVIKAGVLGARAVGVAGYFLNILQNEGY 298 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A+ + + + LLG L ++ Sbjct: 299 EALDQTLGEWQVIVKRLLALLGCSSFTVLSRVEYVL 334 >gi|258512408|ref|YP_003185842.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479134|gb|ACV59453.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 362 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++H++ V F+ L+ + PE+++D+V + + G +L P++I+ Sbjct: 7 QRRKVEHVHAVQALGDPTGVSNGFECVSLVPCSAPEVAWDDVSLATQLCGIRLESPIIIN 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG +++ + INR LA A + +AMA+GS + ++ + R+ V+I+ Sbjct: 67 AMTGGADEVYD-INRKLAQVARRFGLAMALGSASAGLASPEVAYTYRVVREIHQDGVVIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G +++A QAV ++ AD L +H N QE+ G+ +F +A ++ Sbjct: 126 NVG-----MGTRLERARQAVELVRADLLQVHFNAAQELFMAEGDRDFRGALEALAEVARG 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++ KEVG G+S+ D +G+R D+ G GGT++ +E+ R ++I + W Sbjct: 181 VGVPVVAKEVGQGISAEDAIRFADAGVRAIDVGGLGGTNFITVEAWRRG-AEIDDFWHRW 239 Query: 242 GIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSS 298 G+PT SL A A IASGG+R +D+ K++ LGAS G+A P ++ + Sbjct: 240 GLPTAASLCEVAAAVGGRADVIASGGIRTALDVAKAMALGASAVGIAGPLVQLVTQPNGE 299 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + IE L + L G + +L +I Sbjct: 300 EQLNRFIEDLHFGLRALLVLTGCRNFSDLRGKPVVI 335 >gi|218288693|ref|ZP_03492956.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius LAA1] gi|218241051|gb|EED08227.1| isopentenyl-diphosphate delta-isomerase, type 2 [Alicyclobacillus acidocaldarius LAA1] Length = 362 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 173/336 (51%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++H++ V F+ L+ + PE+++D+V + + G +L P++I+ Sbjct: 7 QRRKVEHVHAVQALGDPTGVSNGFECVSLVPCSAPEVAWDDVSLATQLCGIRLESPIIIN 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG +++ + INR LA A + +AMA+GS + ++ + R+ V+I+ Sbjct: 67 AMTGGADEVYD-INRKLAQVARRFGLAMALGSASAGLASPEVAYTYRVVREIHQDGVVIA 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G +++A QA+ ++ AD L +H N QE+ G+ +F + + ++ Sbjct: 126 NVG-----MGTRLERARQAIELVRADLLQVHFNAAQELFMAEGDRDFRGALAALEEVARG 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP++ KEVG G+S+ D +G+R D+ G GGT++ +E+ R ++I + W Sbjct: 181 VGVPVVAKEVGQGISAEDAVRFADAGVRAIDVGGLGGTNFIAVEAWRRG-AEIDDFWHRW 239 Query: 242 GIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM--DSS 298 G+PT SL + A IASGG+R +D+ K++ LGA+ G+A P ++ + Sbjct: 240 GLPTAASLCEVKAAVGGRADVIASGGIRTALDVAKAMALGANAVGIAGPLVRLVTQPNGE 299 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + IE L + L G + +L +I Sbjct: 300 EQLNRLIEELHFGLRALLVLTGCRNFSDLRGKPVVI 335 >gi|67906788|gb|AAY82851.1| predicted IPP isomerase [uncultured bacterium MedeBAC46A06] Length = 351 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 121/331 (36%), Positives = 169/331 (51%), Gaps = 9/331 (2%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 DRK H+ + F+ L H ALPE + VD S LG+ +S PL + Sbjct: 13 TADRKDAHLALAADPLARSGVSAGFELVTLEHCALPECDLEAVDISTTCLGRMVSAPLFV 72 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SMTGG + IN LA AE T + +AVGSQR + ELRQ AP LI Sbjct: 73 GSMTGGTAHA-DAINAALARTAEATGLPLAVGSQRASLESRRSQA--ELRQMAPSVPLIG 129 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG VQL G+ A +A+ L AD +F+HLNPLQE QP G T + + I L Sbjct: 130 NLGGVQLAAPGGLDLARRAIDDLAADAIFIHLNPLQEAAQPEGETGWRGVIDAIESLVGV 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VP++ KEVG G+ G+ D+AG GGT+W+RIE R ++++ F DW Sbjct: 190 VEVPVMAKEVGAGIGPDVARRLFDVGVHAVDVAGLGGTNWTRIEVARREDAEMFEPFLDW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--- 298 GIPT +L R C + I SGG+ NG++ K++ LGASL +A P L+ Sbjct: 250 GIPTVTALRAVRAACPGGRIIGSGGIANGLEAAKALWLGASLVSMAGPVLRALTGDGRGK 309 Query: 299 ---DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +A IE + + +++FL G + + Sbjct: 310 PDAEAATKVIERWKSQLQLTLFLTGAENLDA 340 >gi|157692788|ref|YP_001487250.1| isopentenyl pyrophosphate isomerase [Bacillus pumilus SAFR-032] gi|166918474|sp|A8FEM3|IDI2_BACP2 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|157681546|gb|ABV62690.1| isopentenyl-diphosphate delta-isomerase [Bacillus pumilus SAFR-032] Length = 355 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 109/336 (32%), Positives = 185/336 (55%), Gaps = 11/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HI + D +H LP+++ ++D G P+ I+ Sbjct: 4 AERKKQHIEHALSTG--QHAETGLKDVSFVHVGLPDLATSQIDTHTTIGGLTFGSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG K INR+L+IAA++T + +AVGSQ D +++E+ R+ P+ ++ + Sbjct: 62 AMTGGGGKSTYEINRSLSIAAKETNIPVAVGSQMAALKDKEERRTYEVVRKVNPNGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV +L A+ L +HLN +QEI+ P G+ +F +IA ++ + Sbjct: 122 NLGS-----EATIKQAKEAVEMLEANMLQIHLNVIQEIVMPEGDRDFRGALERIAAIAES 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + +G+ DI G GGT++S+IE+ R ++ F W Sbjct: 177 VGVPVVVKEVGFGMSKETAKKLFHAGVAAVDIGGFGGTNFSKIENLRRQKA--LHYFDQW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIPT SL + +ASGG+++ +D+ KSI LGAS GLA FLK D + Sbjct: 235 GIPTAASLAEVHTSFPDQTVLASGGIQDALDVTKSIALGASAAGLAGFFLKSLTDGGEKG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++A + L+++ + M +LG K ++EL +I Sbjct: 295 LIADMIDLQEDVKMMMTVLGAKTIEELRQTQVVISG 330 >gi|199598406|ref|ZP_03211825.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus HN001] gi|258508495|ref|YP_003171246.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus GG] gi|199590725|gb|EDY98812.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus HN001] gi|257148422|emb|CAR87395.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus GG] gi|259649805|dbj|BAI41967.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus GG] Length = 344 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 16/338 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLI 61 + RK +H+ + K FD L+HRALPE S +VD + G +P+ I Sbjct: 7 SHRKDEHVFLAEKYF-QATAHAGFDQVRLLHRALPESSLADVDLTPPIPFG--WRWPIYI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 ++MTGG+ + ++N L A+ +A+A GSQ V D +F LR + P ++ Sbjct: 64 NAMTGGSPQ-TGKLNAQLGQLAQALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFIL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA A +A+ +L AD L +H+N QE+I P G+ +F I +++ Sbjct: 123 ANIGA-----GHDQHAAEKAISMLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAA 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G D++ + GI Y DI GRGGT+++ IE+ R D QD Sbjct: 177 TASVPVVVKEVGNGFIREDLQTLQQLGIHYVDIGGRGGTNFAVIENARRPHHDFS-YLQD 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T SL AR +A+GG+R+ +D++K+ LGA G++ L + Sbjct: 236 WGQTTVESLLEARGL--PLTILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYA 293 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A +A + ++ LLG Q L A++ + Sbjct: 294 ATLAYFQEFLQQLRQLYALLGVTNWQALQTAPAVLSPE 331 >gi|121535823|ref|ZP_01667623.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosinus carboxydivorans Nor1] gi|121305595|gb|EAX46537.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosinus carboxydivorans Nor1] Length = 354 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 104/339 (30%), Positives = 169/339 (49%), Gaps = 11/339 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M RK+DH+ F+D LIH LPE+ + ++D S G L P++ Sbjct: 1 MRKSRKLDHLRYALTLAD-GPTTTGFEDIKLIHNCLPELDWGDIDLSSSLAGLPLRHPVI 59 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 ++++TGG ++ R+N LA A +T AMAVGSQ F +S++ +R+ P ++ Sbjct: 60 VNAITGGTEEVT-RVNAALADFARRTGTAMAVGSQYAAFEYPEVKESYKIVRKINPDGIV 118 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 +NLGA + ++A AV ++GA+ + +HLN QEII G F IA + Sbjct: 119 FANLGA-----NATPEQARLAVEMIGANAIQIHLNAAQEIIMAEGERRFTGYLENIAAIV 173 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+ VP++ KEVGCG++ +G+R D+ G GGT++ IE+ R + + F Sbjct: 174 AAVTVPVIAKEVGCGIAREQATQLTLTGVRAIDVGGAGGTNFIAIEAAR-TAATLADDFL 232 Query: 240 DWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 WGIPT +S + I SGG+R +K +++G + G+ASP +K + Sbjct: 233 VWGIPTAVSAIEVASVLPKGVDLIVSGGIRTPAAAVKGLVIGGTAVGIASPLIKMLTEQG 292 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + VA E + + LLG + V E ++ Sbjct: 293 MEQTVAWFERFLTDMKRLLLLLGARTVGECAAAPFVVTG 331 >gi|227431890|ref|ZP_03913913.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352357|gb|EEJ42560.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 350 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 13/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDR---NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +H+++ K + +DD + PE+S EVD S + +P Sbjct: 7 SHRKDEHLSLGVKLWRQNTMPVIGATYDDVRWLPNTFPEMSVSEVDASTKLFEHHFKWPF 66 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 I +MTGG+ + RIN LA A ++ +AMAVGSQ + + +F +R+ P+ Sbjct: 67 YIEAMTGGS-ALTGRINMKLAEVAAESNIAMAVGSQSIALKEPETRDTFTIVRKKNPNGF 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +NLGA D + A+ ++ A+ + LH+N QE++ G+ F +A + Sbjct: 126 LFANLGA-----DHPISNVRTAIDMIDANAIELHVNAAQELVMAEGDRKFY-WLDNLAEI 179 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + VP+++KEVG G+S + ++ G GT++S IE R+ S+ + Sbjct: 180 IAKSPVPVIIKEVGFGMSQSTFKQIADLNPAAINVGGANGTNFSIIEQRRNRLSE-AVNL 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 ++G+ T SL A+ IA+GG+++ ++ S++LGASL A L M+ Sbjct: 239 DNYGLSTVESLLEAKMAKKNLPLIATGGIQSVNHVITSLMLGASLTSSAGFMLTTLMEKG 298 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +++ I + + LLG + + EL + Sbjct: 299 QKSLLEEINAWQVALPRLFTLLGAQNITELQHKPLI 334 >gi|312869883|ref|ZP_07730022.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus oris PB013-T2-3] gi|311094468|gb|EFQ52773.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus oris PB013-T2-3] Length = 347 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 108/328 (32%), Positives = 170/328 (51%), Gaps = 11/328 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLI 61 RK +H+++ K FD LIH ALPE + +VD + + +L+ P Sbjct: 6 AQRKNEHLSLARKYYDQAHASHPFDQVRLIHTALPETAVADVDITSPLTKQIRLNAPFYF 65 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+ + INR LA A K +AMA GS + D A +SF + R P ++I Sbjct: 66 EAMTGGSQAALT-INRQLARIAAKYHLAMATGSVSIALKDPAARESFTVIRDENPDGIVI 124 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL + + A A+ +LGAD L LHLN QE++ P G+ F I L++ Sbjct: 125 ANLSS-----GASLTDARAAIDLLGADALELHLNAAQELVMPEGDRRF-FWLDNIRELAT 178 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 A+DVP+++KEVG G++ +D+ ++GI +++GRGGT+++ IE+ R+ + D Sbjct: 179 ALDVPVIVKEVGFGMNKVDVAKLAQTGIEAINVSGRGGTNFALIENRRNHKQDFA-ALAQ 237 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 WG TP S+ AR IASGG+ + VD++K+ LGAS G+A FL Sbjct: 238 WGQTTPESILEARAAKTGLPIIASGGISSPVDLIKAAALGASSCGVAGYFLNILQAAGPA 297 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + + + L G + + +L Sbjct: 298 ALDQEVVNWLTVIPRLVALQGVEHITDL 325 >gi|194016772|ref|ZP_03055385.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus pumilus ATCC 7061] gi|194011378|gb|EDW20947.1| isopentenyl-diphosphate delta-isomerase, type 2 [Bacillus pumilus ATCC 7061] Length = 355 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 185/337 (54%), Gaps = 11/337 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK HI D +H +LP+++ ++D G P+ I+ Sbjct: 4 AERKKQHIEHALSTG--QHAATGLKDVSFVHASLPDLATSQIDTHSTIGGLTFGSPIFIN 61 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG K INR+L+IAA++T + +AVGSQ D +++E+ R+ P ++ + Sbjct: 62 AMTGGGGKSTYEINRSLSIAAKETNIPVAVGSQMAALKDKEERRTYEVVRKVNPDGIVFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLG+ + +++A +AV +L A+ L +HLN +QEI+ P G+ +F +IA ++ + Sbjct: 122 NLGS-----EATMKQAKEAVEMLEANMLQIHLNVIQEIVMPEGDRDFRGALERIAAINES 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G+S + +G+ D+ G GGT++S+IE+ R ++ F W Sbjct: 177 VGVPVVVKEVGFGMSKETAKKLFHAGVAAVDVGGFGGTNFSKIENLRRQKA--LHYFDQW 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 GIPT SL + +ASGG+++ +D+ KSI LGAS GLA FLK D + Sbjct: 235 GIPTAASLAEVHTSFPDQTILASGGIQDALDVTKSIALGASAAGLAGFFLKSLTDGGESG 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++A I L+++ + M +LG K ++EL +I + Sbjct: 295 LIANIIDLQEDVKMMMTVLGVKTIEELRQTQVVISGE 331 >gi|229552297|ref|ZP_04441022.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus LMS2-1] gi|229314279|gb|EEN80252.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus LMS2-1] Length = 344 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 16/338 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLI 61 + RK +H+ + K FD L+HRALPE S +VD + G +P+ I Sbjct: 7 SHRKDEHVFLAEKYF-QATAHAGFDQVRLLHRALPESSLADVDLTPPIPFG--WRWPIYI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 ++MTGG+ + ++N L A+ +A+A GSQ V D +F LR + P ++ Sbjct: 64 NAMTGGSPQ-TGKLNAQLGQLAQALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFIL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA A +A+ +L AD L +H+N QE+I P G+ +F I +++ Sbjct: 123 ANIGA-----GHDQHAAEKAISMLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAA 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G D++ + GI Y DI GRGGT+++ IE+ R D QD Sbjct: 177 TASVPVVVKEVGNGFIREDLQTLQQLGIHYVDIGGRGGTNFAVIENARRPHHDFS-YLQD 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T SL AR +A+GG+R+ +D++K+ LGA G++ L + Sbjct: 236 WGQTTVESLLEARGL--PLTILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYA 293 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A +A + ++ LLG Q L A++ + Sbjct: 294 ATLAYFQEFLQQLRQLYALLGVTNWQALQTAPAVLSPE 331 >gi|203288116|ref|YP_002223131.1| isopentenyl-diphosphate delta-isomerase [Borrelia recurrentis A1] gi|201085336|gb|ACH94910.1| isopentenyl-diphosphate delta-isomerase [Borrelia recurrentis A1] Length = 359 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 4/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K I I + ++++ + ++ H AL E+ F E+D G +S P+ I Sbjct: 12 ILNNKRQQIEICLQRENVNKSDNLLNFVNVKHDALSELDFCEIDTHESLFGYDISMPIFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + ++N++L A + M +GS +++F IK F L++YA + L S Sbjct: 72 SSMTGGV-REGNKLNKSLVKIANDIGIPMGLGSFKLIFKYPEYIKDFSLKKYADNIPLFS 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G VQL +FGV + + L D + LHLN QE++ G NF + IA S Sbjct: 131 NIGVVQLR-EFGVYEIIEMNKRLEVDAVILHLNSGQELMNSKGGRNFKGIKDTIAKFCSV 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P+++KE G G+S + L+ G+ Y D+AG GGT+W +E ++ DI F +W Sbjct: 190 SNLPVIVKETGFGISPDSVISLLELGVSYVDLAGSGGTNWVLVEGIKEKNLDIASCFANW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI + L+L + + ASGG G+DI K I LGA L G+A+ L+ +A Sbjct: 250 GISSVLTLLSIDESFKD-KIFASGGYETGMDIAKGIALGAQLVGVAAAVLRVFYSGGEEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + +SM L ++ + + N + + Sbjct: 309 LYKLFKDYEYVLKMSMLLSNSQNLAQFRTNKYFLSY 344 >gi|320532059|ref|ZP_08032945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135726|gb|EFW27788.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 362 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 175/339 (51%), Gaps = 12/339 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + DR FDD IH +LP +S ++VD LG + P I+ Sbjct: 11 ASRKDEHLELAVHLHRQDRV-NAFDDVSFIHHSLPGVSAEQVDIGTTVLGSRWEVPFYIN 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN +LA AA + VA+A GSQ V D F + R+ AP +++ Sbjct: 70 AMTGGT-QATAAINADLAEAAAEAGVAIACGSQHVALHDPERADGFHVIRRRAPGAFVLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+A +AV +L AD L +HLN QE++ P G+ +F+ +A + +A Sbjct: 129 NVGPT-----VSPQEAARAVEMLEADALQIHLNAAQELVMPEGDRDFSGWEEAVATIVAA 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ + W Sbjct: 184 VPVPVVVKEVGFGLSRRSIESLARTGVAAVDVAGAGGTDFIAIENERRPQRDLSYMV-GW 242 Query: 242 GIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 G PT L L + + +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 243 GQPTALCLLESVAVDDPVGLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 302 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+ + + M LLG V +L ++ + Sbjct: 303 EALRRELSTWGDHVRTLMTLLGAADVAQLRRTDVVVTGR 341 >gi|116618483|ref|YP_818854.1| isopentenyl pyrophosphate isomerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097330|gb|ABJ62481.1| isopentenyl-diphosphate delta-isomerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 350 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 13/336 (3%) Query: 3 NDRKIDHINIVCKDPGIDR---NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 + RK +H+++ K + +DD + PE S EVD S + +P Sbjct: 7 SHRKDEHLSLGVKLWRQNTMPVIGATYDDVRWLPNTFPETSVSEVDVSTKLFEHHFKWPF 66 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 I +MTGG+ + RIN LA A ++ +AMAVGSQ + + +F +R+ P+ Sbjct: 67 YIEAMTGGS-ALTGRINMELAEVAAESNIAMAVGSQSIALKEPETRDTFTIVRKKNPNGF 125 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +NLGA D + A+ ++ A+ + LH+N QE++ G+ F +A + Sbjct: 126 LFANLGA-----DHPISNVRTAIDMIDANAIELHVNAAQELVMAEGDRKFY-WLDNLAEI 179 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + VP+++KEVG G+S + ++ G GT++S IE R+ S+ + Sbjct: 180 IAKSPVPVIIKEVGFGMSQSTFKQIADLNPAAINVGGANGTNFSIIEQRRNRLSE-AVNL 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 +G+ T SL A+ N IA+GG+++ ++ S++LGASL A L M+ Sbjct: 239 DHYGLSTVESLLEAKMAKNNLPLIATGGIQSVNHVITSLMLGASLTSSAGFMLTTLMEKG 298 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +++ I + + LLG + + EL + Sbjct: 299 QKSLLEEINAWQVALPRLFTLLGAQNITELQHKPLI 334 >gi|270290283|ref|ZP_06196508.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pediococcus acidilactici 7_4] gi|270281064|gb|EFA26897.1| isopentenyl-diphosphate delta-isomerase, type 2 [Pediococcus acidilactici 7_4] Length = 327 Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 13/332 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+++ K F + L ALPE+ D+V + G + P I Sbjct: 6 SHRKDEHVSLAEKFYQPVA-SAGFTEIKLRPNALPEMGIDDVSLQTKLAGLPIEVPFFIQ 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++NR LA A +T +AMAVGSQ V +F++ R PH ++++ Sbjct: 65 AMTGGSP-TTAKLNRRLATIARETGLAMAVGSQSVALKYPELADTFQVVRNENPHGLILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA A +AV +L AD L LH+N QE++ P G+ +F + +I + +A Sbjct: 124 NLGADASVA-----AAKKAVAMLDADVLQLHINVAQELVMPEGDRSF-NYLEQIKAIQAA 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+++K VG G++ D G+RY D+ G+GGT++ +IE+ R E D D Sbjct: 178 VSAPVVIKAVGAGMTRADALRLQSVGVRYIDVGGKGGTNFVQIENARRSEKDFAF-LTDL 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 G+ T SL+ A+GG+R D++KSI LGA G+A FL + D Sbjct: 237 GLTTVESLKEVNGL--GLSVTATGGIRTPADVIKSIALGADNVGVAGYFLHQLLHHDDQE 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ IE + + M LLG ++ +L Sbjct: 295 IIDLIERWKYQLRCLMVLLGVTKLADLSERQL 326 >gi|258539706|ref|YP_003174205.1| isopentenyl pyrophosphate isomerase [Lactobacillus rhamnosus Lc 705] gi|257151382|emb|CAR90354.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus rhamnosus Lc 705] Length = 344 Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 16/338 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLI 61 + RK +H+ + K FD L+H+ALPE S +VD + G +P+ I Sbjct: 7 SHRKDEHVFLAEKYF-QATAHAGFDQVRLLHQALPESSLADVDLTPPIPFG--WRWPIYI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLI 120 ++MTGG+ + ++N L A+ +A+A GSQ V D +F LR + P ++ Sbjct: 64 NAMTGGSPQ-TGKLNAQLGQLAQALDLAIASGSQSVALHDPQLAPTFKTLRDHNPDGFIL 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+GA A +A+ +L AD L +H+N QE+I P G+ +F I +++ Sbjct: 123 ANIGA-----GHDQHAAEKAISMLDADALEIHVNAAQEVIMPEGDRDFL-WQENIRTIAA 176 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G D++ + GI Y DI GRGGT+++ IE+ R D QD Sbjct: 177 TASVPVVVKEVGNGFIREDLQTLQQLGIHYVDIGGRGGTNFAVIENARRPHHDFS-YLQD 235 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 WG T SL AR +A+GG+R+ +D++K+ LGA G++ L + Sbjct: 236 WGQTTVESLLEARGL--PLTILATGGIRSPLDVIKAQRLGAHAVGISGLVLHHLIQTDYA 293 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A +A + ++ LLG Q L A++ + Sbjct: 294 ATLAYFQEFLQQLRQLYALLGVTNWQALQTAPAVLSPE 331 >gi|325067065|ref|ZP_08125738.1| isopentenyl pyrophosphate isomerase [Actinomyces oris K20] Length = 362 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 173/339 (51%), Gaps = 12/339 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + DR FDD IH +LP +S ++VD LG + P I+ Sbjct: 11 ASRKDEHLELAVHLHRQDR-ANAFDDVSFIHHSLPGVSAEQVDIGTTVLGSRWEAPFYIN 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN +LA AA + VA+A GSQ V D F + R+ AP +++ Sbjct: 70 AMTGGT-QATAAINADLAEAAAEAGVAIACGSQHVALHDPERADGFHVIRRRAPGAFVLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+A +AV +L AD L +HLN QE++ P G+ +F+ +A + +A Sbjct: 129 NVGPT-----VSPQEAARAVEMLEADALQIHLNAAQELVMPEGDRDFSGWEEAVATIVAA 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ W Sbjct: 184 VPVPVVVKEVGFGLSRRSIESLARTGVAAVDVAGAGGTDFIAIENERRPQRDLS-YLVGW 242 Query: 242 GIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 G PT L L + +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 243 GQPTALCLLESLSGSEPVSLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 302 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+ + + M LLG V +L ++ + Sbjct: 303 EALRRELSTWGDHVRTLMTLLGVADVAQLRRTDVVVTGR 341 >gi|116511267|ref|YP_808483.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris SK11] gi|116106921|gb|ABJ72061.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. cremoris SK11] Length = 349 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 15/336 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK +H+++ K +RN+ F D +I LPE+S ++V+ S + G+ FP Sbjct: 10 QHRKDEHLSLAYKYWKEERNQTLGLTFSDVRIIPNTLPELSTEKVELSSKVFGQDFEFPF 69 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTV 118 I +MTGG + ++IN+ LA A+ +AMAVGSQ + F E+R+ Sbjct: 70 YIEAMTGGGERA-DKINQTLAEIAKNQHLAMAVGSQSIALKFPELAAGFKEVRKIHSSGF 128 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +NLGA ++ A +AV ++ A+ L +H+N QE+ G+ F I + Sbjct: 129 LFANLGA-----GHSLENAKRAVEMIEANALEIHVNTAQELPMDEGDREFY-WLENINEI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++VP+++KEVG G+S + K+ + ++ G GGT+++ IE R G Sbjct: 183 ASQLEVPVIVKEVGFGISQKTFKELAKTAVSGINVGGAGGTNFAWIERKRSKN---GFDL 239 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 D+G T SL A+ N +A+GG+ + DI KS+ILGA L A LK M Sbjct: 240 DDFGFSTLESLLEAKTAENTKSLVATGGISSAQDIFKSLILGADLASSAGFILKNLMQTG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V +E +++ L G+K + E + L Sbjct: 300 PEKVEEILEQWKQDLNKLFVLTGSKNIAESHNVDLL 335 >gi|332638890|ref|ZP_08417753.1| isopentenyl pyrophosphate isomerase [Weissella cibaria KACC 11862] Length = 345 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 10/336 (2%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ + +IH+ LPE VD +V+ P I +M Sbjct: 8 RKDEHLSLAEAEFRRHAPVSSLHQVRIIHQGLPETRVANVDLTVDDPIFNFKTPFYIEAM 67 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ K +IN LA AA++T +AMAVGSQ V D NAI +F++ R+ P +++N+ Sbjct: 68 TGGSQK-TGKINAQLATAAKETGLAMAVGSQSVALKDENAIDTFKVVREINPDGFIMANI 126 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA A + V ++GA+ L +H+N QE++ P G+ ++ ++A + + Sbjct: 127 GA-----GHTAAHAQEVVDMIGANALEVHINVAQEVVMPEGDRDYV-WQDELANIIQTVS 180 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI-VFQDWG 242 VP+++KEVG G++ I G +Y ++ GR GT+++ IE R+ DWG Sbjct: 181 VPVIIKEVGFGMAKETIGQLRDLGAQYINLGGRSGTNFAVIEDRRNRAMTAEHGYLYDWG 240 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 T SL A+ + +A+GG+++ +D+LK+ ILGA G+A FL + + +D V Sbjct: 241 QTTAESLLEAQLVADAPTLLATGGIQDPLDVLKAQILGAKAVGVAGHFLHTVLNEGTDGV 300 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + I+ + ++G +R +L ++ + Sbjct: 301 ITEIQRWQNHLAKLYAMVGAERQADLQHVQTVLSPE 336 >gi|203284582|ref|YP_002222322.1| isopentenyl-diphosphate delta-isomerase [Borrelia duttonii Ly] gi|201084025|gb|ACH93616.1| isopentenyl-diphosphate delta-isomerase [Borrelia duttonii Ly] Length = 359 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 4/336 (1%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 + + K I I + ++++ + ++ H AL E+ F E+D G ++ P+ I Sbjct: 12 ILNNKRQQIEICLQRENVNKSDNLLNFVNVKHDALSELDFCEIDTHESLFGYDIAMPIFI 71 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 SSMTGG + ++N++L A + M +GS +++F IK F L++YA + L S Sbjct: 72 SSMTGGV-REGNKLNKSLVKIANDIGIPMGLGSFKLIFKYPEYIKDFSLKKYADNIPLFS 130 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G VQL +FGV + + L D + LHLN QE++ G NF + IA S Sbjct: 131 NIGVVQLR-EFGVYEIIEMNKRLEVDAVILHLNSGQELMNSKGGRNFKGIKDTIAKFCSV 189 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P+++KE G G+S + L+ G+ Y D+AG GGT+W +E ++ DI F +W Sbjct: 190 SNLPVIVKETGFGISPDSVISLLELGVSYVDLAGSGGTNWVLVEGIKEKNLDIASCFANW 249 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 GI + L+L + + ASGG G+DI K I LGA L G+A+ L+ +A Sbjct: 250 GISSVLTLLSIDESFKD-KIFASGGYETGMDIAKGIALGAQLVGVAAAVLRVFYSGGEEA 308 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + +SM L ++ + + N + + Sbjct: 309 LYKLFKDYEYVLKMSMLLSNSQNLAQFRTNKYFLSY 344 >gi|125623295|ref|YP_001031778.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris MG1363] gi|124492103|emb|CAL97032.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. cremoris MG1363] gi|300070046|gb|ADJ59446.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. cremoris NZ9000] Length = 349 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 15/336 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK +H+++ K +RN+ F D +I LPE+S ++V+ S + G+ FP Sbjct: 10 QHRKDEHLSLAYKYWKEERNQTLGLTFSDVRIIPNTLPELSTEKVELSSKVFGQDFEFPF 69 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTV 118 I +MTGG + ++IN+ LA A+ +AMAVGSQ + F E+R+ Sbjct: 70 YIEAMTGGGERA-DKINQTLAEIAKNQHLAMAVGSQSIALKFPELAAGFKEVRKIHSSGF 128 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +NLGA ++ A +AV ++ A+ L +H+N QE+ G+ F I + Sbjct: 129 LFANLGA-----GHSLENAKRAVEMIEANALEIHVNTAQELPMDEGDREFY-WLENINEI 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++VP+++KEVG G+S + K+ + ++ G GGT+++ IE R G Sbjct: 183 ASQLEVPVIVKEVGFGISQKTFKELSKTAVSGINVGGAGGTNFAWIERKRSKN---GFDL 239 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 D+G T SL A+ N +A+GG+ + DI KS+ILGA L A LK M Sbjct: 240 DDFGFSTLESLLEAKTAENTKSLVATGGISSAQDIFKSLILGADLASSAGFILKNLMQTG 299 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V +E +++ L G+K + E + L Sbjct: 300 PEKVEEILEQWKQDLNKLFVLTGSKNIAESHNVDLL 335 >gi|241888621|ref|ZP_04775928.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gemella haemolysans ATCC 10379] gi|241864644|gb|EER69019.1| isopentenyl-diphosphate delta-isomerase, type 2 [Gemella haemolysans ATCC 10379] Length = 316 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D D + + + ++P D+VD S G FP I+++ Sbjct: 2 RKKDHIRLALAD---KTKVTSLDSYAIDYNSIPLFGLDDVDTSTSVCGDHWEFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN++ +EK + GS + +++ P Sbjct: 59 TAGGED-CNKINQDFMEVSEKCGIKFFPGSYSPALKNKEDEEAY------PKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +V L D + +A+ A + LH NPLQEI+ P G+ NF + + +SS + Sbjct: 106 SVNLGLDKDPKLVLEAIEKSQAKYIQLHTNPLQEIVMPEGDHNFESWYANLKEVSSKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + I DI+G GGT+++RIE+ R + + G Sbjct: 166 PVILKETGFGMNEATIKLAIDLNIPAVDISGMGGTNFARIENGRRTDK--STYLEGIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE+A Y ++ IASGG+RN +D++K + LGA G++ FL+ + DA++ Sbjct: 224 TAESLEIAYSYKDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLEILVSKGKDALIQ 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ K + EL Sbjct: 284 EIEKWKKEVKFLMILMNAKTIAEL 307 >gi|326771747|ref|ZP_08231032.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces viscosus C505] gi|326637880|gb|EGE38781.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces viscosus C505] Length = 362 Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+ + + G DR FDD IH +LP +S ++VD LG + P I+ Sbjct: 11 ASRKDEHLELAMRLHGQDR-AGAFDDVSFIHHSLPGVSAEQVDIGTTVLGCRWELPFYIN 69 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN LA AA + VA+A GSQ V D F + R AP +++ Sbjct: 70 AMTGGT-QATAAINAGLAEAAAEAGVAIACGSQHVALRDPERADGFHVIRHRAPGAFVLA 128 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+A QAV +L A+ L +HLN QE++ P G+ +F S IA + +A Sbjct: 129 NVGPT-----VSPQEALQAVEMLEANALQIHLNAAQELVMPEGDRDFTGWSEAIAGIVAA 183 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG GLS IE ++G+ D+AG GGT + IE+ R + D+ W Sbjct: 184 VPVPVVVKEVGFGLSRRTIEALARTGVAAVDVAGAGGTDFIAIENERRPQRDLS-YLVGW 242 Query: 242 GIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 G T L L + +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 243 GQSTALCLLESLSGSEPVSLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 302 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A+ + + + M LLG V +L L+ Sbjct: 303 EALCQELHTWSEHVRTLMTLLGAADVSQLRRTDVLVTG 340 >gi|116629677|ref|YP_814849.1| isopentenyl pyrophosphate isomerase [Lactobacillus gasseri ATCC 33323] gi|238854237|ref|ZP_04644581.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 202-4] gi|282852203|ref|ZP_06261555.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 224-1] gi|311110680|ref|ZP_07712077.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri MV-22] gi|116095259|gb|ABJ60411.1| Isopentenyl diphosphate isomerase [Lactobacillus gasseri ATCC 33323] gi|238833048|gb|EEQ25341.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 202-4] gi|282556622|gb|EFB62232.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri 224-1] gi|311065834|gb|EFQ46174.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus gasseri MV-22] Length = 341 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 106/325 (32%), Positives = 177/325 (54%), Gaps = 10/325 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++N F+ HLI ALPE + + + E G+K+S P I+ Sbjct: 5 SQRKEEHLALAKMFFNSNKN-NDFNHIHLIRPALPESAVRKESITTEMFGQKISAPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ INR LA AA K + MA+GS ++ + + IKSFE+ RQ P +L + Sbjct: 64 AMTGGSDASYT-INRRLAKAAAKENIPMALGSASILEKEIDQIKSFEIARQENPDGLLFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A + V L A+ L +HLN +QE + P G+ +F + + Sbjct: 123 NV-----NPTTNPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFH-WLDNLKAIRQT 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 177 VDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKNQKLMF-LEDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A ++++ Sbjct: 236 GLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFASQDTESL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQE 326 + AI++L+ E + L G K + E Sbjct: 296 IVAIQNLKYELRLLTALFGLKDIAE 320 >gi|115377887|ref|ZP_01465073.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] gi|115365102|gb|EAU64151.1| isopentenyl-diphosphate delta-isomerase, type 2 [Stigmatella aurantiaca DW4/3-1] Length = 319 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 108/309 (34%), Positives = 164/309 (53%), Gaps = 6/309 (1%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV 88 L+H A+PE+ ++D S FLGK+L PLLI+ MTGG + R+N++LA AE+ + Sbjct: 1 MRLVHCAMPELDAGDLDLSTRFLGKRLHCPLLITGMTGGTERA-GRVNKDLATLAERYGL 59 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A VGSQR M SF++R AP L+ N+G Q GV + + + ADG Sbjct: 60 AFGVGSQRAMSEAPERAASFQVRDVAPSVALLGNIGLYQAAR-LGVDGVRRLMEAIEADG 118 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + LHLN QE+ QP G+ +F + + L A LL+KE GCG+ + G+ Sbjct: 119 MALHLNAGQELTQPEGDRDFRGGYAVVEGLVKAFGSRLLVKETGCGIGPEVARRLKELGV 178 Query: 209 RYFDIAGRGGTSWSRIESHRD--LESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASG 265 D++G GGTSW R+E R L +++G F WGIPT ++ R E + +ASG Sbjct: 179 SNIDVSGLGGTSWVRVEQLRAKGLLAELGAEFSGWGIPTAAAVASVRQAVGPEVRLVASG 238 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G+D+ K + LGA + G+A P K + + A++ + +M L G++ Sbjct: 239 GIRTGLDVAKVLALGADVAGMALPLFKAQQEGGLEGAEKALQLILAGLRQAMLLTGSRGC 298 Query: 325 QELYLNTAL 333 EL + + Sbjct: 299 AELRRHPVI 307 >gi|317495995|ref|ZP_07954357.1| isopentenyl-diphosphate delta-isomerase [Gemella moribillum M424] gi|316913899|gb|EFV35383.1| isopentenyl-diphosphate delta-isomerase [Gemella moribillum M424] Length = 315 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 157/324 (48%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + +D D++ + + ++P ++D S G K FP I+++ Sbjct: 2 RKKDHIRLALQD---KTTVTSLDNYAIDYNSIPRFGLADIDTSTTVCGTKWDFPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN + ++ T + GS + K++ P Sbjct: 59 TAGGED-CNKINNDFVEISKITGIEFFPGSYSPALKNEEDAKAY------PKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +V L D +A+ A L +H NPLQEI+ P G+ NF + + +S + Sbjct: 106 SVNLGLDKEPSLILKAITDTNARYLQMHTNPLQEIVMPEGDHNFESWFTTLQEVSENSTI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L L + D++G GGT+++RIE+ R + ++ G Sbjct: 166 PVILKETGFGMNEETIKLALDLKLAAVDVSGMGGTNFARIENGRRDNKSV--YLENIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE PY ++ IASGG+RN +D++K + LGA G++ FL + D DA++A Sbjct: 224 TAESLENVYPYRDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLDILVNDGKDALIA 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ K +QEL Sbjct: 284 EIEKWKKEIKFLMILMNAKTIQEL 307 >gi|300361741|ref|ZP_07057918.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus gasseri JV-V03] gi|300354360|gb|EFJ70231.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus gasseri JV-V03] Length = 341 Score = 312 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 107/325 (32%), Positives = 178/325 (54%), Gaps = 10/325 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++N F HLI ALPE + ++ + E G+K+S P I+ Sbjct: 5 SQRKEEHLALAKMFFNSNKN-NDFKHIHLIRPALPESAVNKESIATEMFGQKISAPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ INR LA AA K + MA+GS ++ + + IKSFE+ RQ P +L + Sbjct: 64 AMTGGSDASYT-INRRLAQAAAKENIPMALGSASILEKEIDQIKSFEIARQENPDGLLFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + A + V VL A+ L +HLN +QE + P G+ +F + + A Sbjct: 123 NVNPTTK-----PKVAQKIVQVLNANALQIHLNSVQEAVMPEGDRDFH-WLDNLKAIRQA 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 177 VDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKNQKLMF-LEDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A ++++ Sbjct: 236 GLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFANQDTESL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQE 326 + AI++L+ E + L G K + E Sbjct: 296 IVAIQNLKYELRLLTALFGLKNIAE 320 >gi|281490949|ref|YP_003352929.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis KF147] gi|281374707|gb|ADA64227.1| Isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis KF147] Length = 347 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 170/336 (50%), Gaps = 15/336 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK +H+++ K ++N+ F D +I +LPE+S ++++ S E G+ FP Sbjct: 9 QHRKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTEKINFSSEVFGQNFEFPF 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTV 118 I +MTGG + ++INR LA A+ +AMAVGSQ + F E+R+ Sbjct: 69 YIEAMTGGTERA-DKINRQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGF 127 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+GA ++ A +A+ ++ A+ L +H+N QE+ G+ F I + Sbjct: 128 LFANIGA-----GHSLENAKRAMDMIEANALEIHVNTAQELPMDEGDREFY-WLENINEI 181 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R G Sbjct: 182 ASQLEVPVIVKEVGFGISQKTFKALAKTAVSGINIGGAGGTNFAWIERKRSKN---GFNL 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 ++G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M Sbjct: 239 DEFGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTG 298 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V IE +++ L G+K ++E L Sbjct: 299 PEKVEEVIEQWKQDLNKLFVLTGSKNIEECRKVELL 334 >gi|326405983|gb|ADZ63054.1| isopentenyl-diphosphate delta-isomerase [Lactococcus lactis subsp. lactis CV56] Length = 347 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 168/336 (50%), Gaps = 15/336 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK +H+++ K ++N+ F D +I +LPE+S +++ S E G+ FP Sbjct: 9 QHRKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTKKINFSSEVFGQNFEFPF 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTV 118 I +MTGG + ++IN LA A+ +AMAVGSQ + F E+R+ Sbjct: 69 YIEAMTGGTERA-DKINAQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGF 127 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+GA ++ A +AV ++ A+ L +H+N QE+ G+ F I + Sbjct: 128 LFANIGA-----GHSLENAKRAVDMIEANALEIHVNTAQELPMDEGDREFY-WLENINEI 181 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R G Sbjct: 182 ASQLEVPVVVKEVGFGISQKTFKALAKTSVSGINIGGAGGTNFAWIERKRSKN---GFNL 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 ++G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M Sbjct: 239 DEFGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTG 298 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V IE +++ L G+K ++E L Sbjct: 299 PEKVEEVIEQWKQDLNKLFVLTGSKNIEECRKVELL 334 >gi|296110441|ref|YP_003620822.1| isopentenyl pyrophosphate isomerase [Leuconostoc kimchii IMSNU 11154] gi|295831972|gb|ADG39853.1| isopentenyl pyrophosphate isomerase [Leuconostoc kimchii IMSNU 11154] Length = 351 Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRN---KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ ++ F+D + PE++ +VD S + +P I Sbjct: 9 RKDEHLSLGVNLWRQRKHVQIGATFEDVRWLPETFPEMAVTDVDVSTTLFNHQFKWPFYI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +MTGG+ + RIN LA A+KT +AMAVGSQ + + NA ++F+ +R+ P+ LI Sbjct: 69 EAMTGGS-NLTGRINGQLAEVAKKTNLAMAVGSQSIALKEPNAAETFKLVRKNHPNGFLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D ++ A+ ++ A+ + +H+N QE++ G+ F +A + + Sbjct: 128 ANLGA-----DHPIKNVRSAIDMIDANAIEMHVNVAQELVMSEGDRKFY-WLDNLATIIA 181 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G+S+ + G ++ G GT+++ IE R+ + D Sbjct: 182 KSPVPVIVKEVGFGMSTTAFNTLKELGPAAINVGGGNGTNFAIIERRRNRQPD-SFNIDH 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD- 299 +G+ T SL A+ N+ IA+GG+++ DI+ S++LGA++ A L+ MD Sbjct: 241 YGLSTVESLLSAKLVHNQIPLIATGGIQSANDIVTSLMLGATMTSSAGFMLETLMDQGQI 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++ IE + LLG K L + Sbjct: 301 ALIKQIEEWQLALPRLFTLLGAKNNTSLQKKDRI 334 >gi|15672389|ref|NP_266563.1| isopentenyl pyrophosphate isomerase [Lactococcus lactis subsp. lactis Il1403] gi|13878551|sp|Q9CIF5|IDI2_LACLA RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|12723281|gb|AAK04505.1|AE006277_5 carotenoid biosynthetic protein [Lactococcus lactis subsp. lactis Il1403] Length = 347 Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 168/336 (50%), Gaps = 15/336 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 RK +H+++ K ++N+ F D +I +LPE+S +++ S E G+ FP Sbjct: 9 QHRKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNSLPELSTKKINFSSEVFGQNFEFPF 68 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTV 118 I +MTGG + ++IN LA A+ +AMAVGSQ + F E+R+ Sbjct: 69 YIEAMTGGTERA-DKINAQLAEIAKNQHLAMAVGSQSIALKFPELAAGFSEVRKIHSSGF 127 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L +N+GA ++ A +AV ++ A+ L +H+N QE+ G+ F I + Sbjct: 128 LFANIGA-----GHSLENAKRAVDMIEANALEIHVNTAQELPMDEGDREFY-WLENINEI 181 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +S ++VP+++KEVG G+S + K+ + +I G GGT+++ IE R G Sbjct: 182 ASQLEVPVVVKEVGFGISQKTFKALAKTSVSGINIGGAGGTNFAWIERKRSKN---GFNL 238 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-S 297 ++G+ T SL A+ N IA+GG+ + +I KS+ILGA L A LK M Sbjct: 239 DEFGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKSLILGADLSSSAGFILKNLMQTG 298 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V IE +++ L G+K ++E L Sbjct: 299 PEKVEEVIEQWKQDLNKLFVLTGSKNIEECRKVELL 334 >gi|329947851|ref|ZP_08294783.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328523475|gb|EGF50573.1| isopentenyl-diphosphate delta-isomerase, type 2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 391 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 110/339 (32%), Positives = 171/339 (50%), Gaps = 12/339 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ + G DR FDD +H ALP D +D S + G P I+ Sbjct: 18 ASRKDEHLDLAMRLNGTDRP-NAFDDVSFMHHALPGTFTDSIDISTDVCGAHWQAPFYIN 76 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG + IN +LA AA VA+A GS V D F + R+ AP +++ Sbjct: 77 AMTGGT-QATAAINAHLAEAAADAGVAIACGSVHVALHDPERADGFRVIRRRAPGAFVLA 135 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+G Q+A QAV +L A+ L +HLN QE++ P G+ +F S IA +++A Sbjct: 136 NVGPT-----VSPQEAAQAVEMLQANALQIHLNAAQELVMPEGDRDFTGWSETIAAIAAA 190 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG GLS I+ ++G+ D+AG GGT + IE+ R + D+ W Sbjct: 191 VPVPVVVKEVGFGLSRRTIDALTRTGVAAVDVAGAGGTDFIAIENERRPQRDLS-YLVGW 249 Query: 242 GIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 G PT L L + +ASGG+RN +D+++S+ LGA G + L+ + + Sbjct: 250 GQPTALCLLESLAVAEPVSLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGP 309 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+ + + M LLG V L L+ + Sbjct: 310 EALRRELHTWSDHVRTLMTLLGAADVSRLRRTDVLVTGR 348 >gi|302389720|ref|YP_003825541.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosediminibacter oceani DSM 16646] gi|302200348|gb|ADL07918.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermosediminibacter oceani DSM 16646] Length = 349 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 179/338 (52%), Gaps = 11/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK++HI + F D L+H L E++ DE+D S +L P++I+ Sbjct: 5 SRRKMEHIKYSLLLEK-KLKRNVFSDITLLHNCLSEVNLDEIDISTNLQNLRLEKPIIIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 ++TGG + + INR LA A + +AMAVGSQR+ D +A SF++ R+ P ++ + Sbjct: 64 AITGGFSFALA-INRELAKIAREFGLAMAVGSQRIAIKDKSAQASFKVVREENPEGLIFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA D +++ + V ++ AD + +HLN QEI+ G FA I +++ Sbjct: 123 NIGA-----DASLEEVAEVVEMINADAVQIHLNTPQEIVMAEGRKCFAGTVDNIKRIAAG 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G++ + + + G++ D+ G GGT + IE+ R+ + + W Sbjct: 178 VKVPVIVKEVGFGIAREEARMLVDCGVKIIDVGGAGGTDFIAIENRRN-RKNAVTTLEGW 236 Query: 242 GIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD- 299 GIPTP+SL + A IASGGL+ G+D+ KS+ LGA GLA L + Sbjct: 237 GIPTPVSLIEVISEIGDRADIIASGGLKTGLDVAKSLALGAKAAGLAGTVLYKLLKGGPV 296 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ + + +E SM ++G + EL +I + Sbjct: 297 ALRKYLRQVERELRYSMAMVGANNLSELRKRPLIITGK 334 >gi|329768013|ref|ZP_08259524.1| isopentenyl-diphosphate delta-isomerase [Gemella haemolysans M341] gi|328838498|gb|EGF88106.1| isopentenyl-diphosphate delta-isomerase [Gemella haemolysans M341] Length = 316 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 19/324 (5%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK DHI + D D + + + ++P D+VD S G + +P I+++ Sbjct: 2 RKKDHIRLALAD---KTKVTSLDSYAIDYNSIPLFGLDDVDTSTSVCGDRWEYPFFINAI 58 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 T G +IN++ ++K + GS +++ P Sbjct: 59 TAGGED-CNKINQDFMEVSKKCGINFFPGSYSPALKSKEDEEAY------PKGY------ 105 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +V L D Q +A+ A + LH NPLQEI+ P G+ NF + + +SS + Sbjct: 106 SVNLGLDKDPQLVLEAIEKSQAKYIQLHTNPLQEIVMPEGDHNFESWYANLKEVSSKSPI 165 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LKE G G++ I+L + I DI+G GGT+++RIE+ R + + G Sbjct: 166 PVILKETGFGMNEATIKLAIDLNIPAVDISGMGGTNFARIENGRRTDK--STYLEAIGYT 223 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 T SLE+A Y ++ IASGG+RN +D++K + LGA G++ FL+ + + A++ Sbjct: 224 TAESLEIAYSYKDKIDIIASGGIRNPLDVVKCLALGAKAVGVSKIFLEILVNEGKAALIQ 283 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 IE +KE M L+ + + EL Sbjct: 284 EIEKWKKEVKFLMILMNARNIAEL 307 >gi|227529131|ref|ZP_03959180.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus vaginalis ATCC 49540] gi|227350975|gb|EEJ41266.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus vaginalis ATCC 49540] Length = 358 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 185/338 (54%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK +H+++ K F+ +IH++LPEIS ++V+P +L+FP I Sbjct: 19 AQRKNEHLSLATKLYNQVH-TNSFNSMQVIHKSLPEISLNQVNPVTNCGNLRLAFPFFIE 77 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 +MTGG+ + +IN+ LA A+K +AMA+GS ++F D A KSF+ +R P ++I+ Sbjct: 78 AMTGGSQNAL-KINQELATVAKKHHLAMALGSASIIFHDPAAKKSFKIVRDVNPDGIIIA 136 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NL A +++A + +LGA+ L LH+N QE+I +G+ +F + I L + Sbjct: 137 NLSA-----KASLEQAKTVIDLLGANALELHINTTQELIMDDGDRDFH-WLTNIESLVNH 190 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +++P+++KEVG G+ S I G+ +++GRGGT+++ IE R+ +D W Sbjct: 191 LNIPVIVKEVGFGMDSSTINQLQSIGVSIINVSGRGGTNFAAIEDRRNHTADFSF-LDQW 249 Query: 242 GIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 G T S+ AR + Q IASGG+ + +D++K+ ILGA+ G+A FL + D D Sbjct: 250 GQTTLESMLEAREARTKDTQIIASGGICSPLDVIKAGILGANAVGVAGYFLNILIRDGID 309 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+ + S + + LLG K EL ++ + Sbjct: 310 ALDKELTSWQIALPRLLALLGCKSFNELPSTNFVLHGE 347 >gi|149918165|ref|ZP_01906657.1| isopentenyl-diphosphate delta-isomerase, type 2 [Plesiocystis pacifica SIR-1] gi|149820925|gb|EDM80332.1| isopentenyl-diphosphate delta-isomerase, type 2 [Plesiocystis pacifica SIR-1] Length = 355 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 183/338 (54%), Gaps = 9/338 (2%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++ RK DH+ + D G + L+H ALPE+ DEVD VE LGK L P++ Sbjct: 10 ISQRKKDHLALCAGDNVGFREKSTLLEQVELVHDALPEMHADEVDSRVELLGKTLQAPVV 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 IS+MTGG ++ +IN++LA AE+ +A+ +GSQR MF + +F++R+ AP +L Sbjct: 70 ISAMTGGTDEAA-KINQDLAQVAEELGLAIGLGSQRAMFERPHTAWTFQVRERAPKVLLF 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG VQ + Q +GAD L +HLNP EI+QP G+ +F+ L + Sbjct: 129 GNLGLVQARV-MTTDQIRQLCADVGADALCIHLNPAMEIVQPGGDRDFSGGLDVFRRLVA 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVF 238 + +P++ KE GCG+S + L +G+ +FD++G GGTSW +E+HR D + + Sbjct: 188 ELGIPVIAKETGCGISRTVAKKILDTGVTHFDVSGSGGTSWVAVEAHRAADDQKALAEEL 247 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-- 296 DWGIPT SL A+ IA+GGLR G D+ +S+ LGA+ GGLA LK Sbjct: 248 WDWGIPTAASLLQLEGL--GAKVIATGGLRRGSDVARSVALGATAGGLAGAVLKAYRHEG 305 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 D + + M + G++ V EL ++ Sbjct: 306 GIDGARRFLTRVVATVRAIMLITGSRTVAELQGAERIL 343 >gi|227535019|ref|ZP_03965068.1| isopentenyl pyrophosphate isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187334|gb|EEI67401.1| isopentenyl pyrophosphate isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 344 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 14/334 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K FD L+HRALPE + VD + L +P+ I+ Sbjct: 7 SHRKDEHVFLAEKYF-QSVAHAGFDQVRLLHRALPETTMAAVDLKPD-LPFNWQWPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + ++N L A+ VA+A GSQ V D + +F LR + P+ +++ Sbjct: 65 AMTGGSPQ-TGKLNAQLGQLAQALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA A AV +L A+ L +HLN QE++ P G+ +F + I + + Sbjct: 124 NVGAGHHAT-----AAEAAVAMLKANALEIHLNAPQEVVMPEGDRDF-MWQANIKSIIAT 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G D++ + G+++ D+ GRGGT+++ IE+ R D QDW Sbjct: 178 SQVPIVVKEVGNGFIREDLQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFA-YLQDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL AR +A+GG+R+ +D++K++ LGA G++ L + +A Sbjct: 237 GQTTVESLLEARGL--GLTMLATGGVRSPLDVVKALRLGAHAVGMSGMVLHHLIQTGYEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A ++ + LLG QEL ++ Sbjct: 295 TLAYFQNFLHQLRQLYALLGVTNWQELQEAPIVL 328 >gi|329667332|gb|AEB93280.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii DPC 6026] Length = 341 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 170/324 (52%), Gaps = 10/324 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++ F+ HLI ALPE + S E G +S P I+ Sbjct: 5 SQRKEEHLALAKMFFNSNK-DNDFNHVHLIRPALPESAVSRDSISTEMFGHTISAPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ IN+ LA AA + MA+GS ++ + + IKSFE+ RQ P ++ + Sbjct: 64 AMTGGSD-TSYTINQRLAKAAAAENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A + V L A+ L +HLN +QE + P G+ +F + + Sbjct: 123 NV-----NPTTDPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFH-WIDNLKEIRDT 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 177 VDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKTQKLNF-LEDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A S+ + Sbjct: 236 GLSTVKTLLAARTIPVTKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQ 325 +AAI++L+ E + L G + Sbjct: 296 IAAIQNLKYELKLLTALFGLDNIS 319 >gi|116494977|ref|YP_806711.1| isopentenyl pyrophosphate isomerase [Lactobacillus casei ATCC 334] gi|122263605|sp|Q038V3|IDI2_LACC3 RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|116105127|gb|ABJ70269.1| Isopentenyl diphosphate isomerase [Lactobacillus casei ATCC 334] Length = 344 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 14/334 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K FD L+HRALPE + VD + L +P+ I+ Sbjct: 7 SHRKDEHVFLAEKYF-QSVAHAGFDQVRLLHRALPETTMAAVDLKPD-LPFNWQWPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + ++N L A+ VA+A GSQ V D + +F LR + P+ +++ Sbjct: 65 AMTGGSPQ-TGKLNAQLGQLAQALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA A AV +L A+ L +HLN QE++ P G+ +F + I + + Sbjct: 124 NVGAGHHAT-----AAEAAVAMLKANALEIHLNAAQEVVMPEGDRDF-MWQANIKSIIAT 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G D++ + G+++ D+ GRGGT+++ IE+ R D QDW Sbjct: 178 SQVPIVVKEVGNGFIREDLQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFA-YLQDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL AR +A+GG+R+ +D++K++ LGA G++ L + +A Sbjct: 237 GQTTVESLLEARGL--GLTMLATGGVRSPLDVVKALRLGAHAVGMSGMVLHHLIQTGYEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A ++ + LLG QEL ++ Sbjct: 295 TLAYFQNFLHQLRQLYALLGVTNWQELQEAPIVL 328 >gi|239631423|ref|ZP_04674454.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525888|gb|EEQ64889.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 345 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 14/334 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K FD L+HRALPE + VD + L +P+ I+ Sbjct: 8 SHRKDEHVFLAEKYF-QSVAHAGFDQVRLLHRALPETTMAAVDLKPD-LPFNWQWPIYIN 65 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + ++N L A+ VA+A GSQ V D + +F LR + P+ +++ Sbjct: 66 AMTGGSPQ-TGKLNAQLGQLAQALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILA 124 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA A AV +L A+ L +HLN QE++ P G+ +F + I + + Sbjct: 125 NVGAGHHAT-----AAEAAVAMLKANALEIHLNAAQEVVMPEGDRDF-MWQANIKSIIAT 178 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G D++ + G+++ D+ GRGGT+++ IE+ R D QDW Sbjct: 179 SQVPIVVKEVGNGFIREDLQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFA-YLQDW 237 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL AR +A+GG+R+ +D++K++ LGA G++ L + +A Sbjct: 238 GQTTVESLLEARGL--GLTMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEA 295 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A ++ + LLG QEL ++ Sbjct: 296 TLAYFQNFLHQLRQLYALLGVTNWQELQEAPIVL 329 >gi|301066544|ref|YP_003788567.1| isopentenyl diphosphate isomerase [Lactobacillus casei str. Zhang] gi|300438951|gb|ADK18717.1| Isopentenyl diphosphate isomerase [Lactobacillus casei str. Zhang] Length = 344 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 14/334 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K FD L+HRALPE + VD + L +P+ I+ Sbjct: 7 SHRKDEHVFLAEKYF-QSVAHAGFDQVRLLHRALPETTMAAVDLKPD-LPFNWQWPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + ++N L A+ VA+A GSQ V D + +F LR + P+ +++ Sbjct: 65 AMTGGSPQ-TGKLNAQLGQLAQALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA A AV +L A+ L +HLN QE++ P G+ +F + I + + Sbjct: 124 NVGAGHHAT-----AAEAAVAMLKANALEIHLNAAQEVVMPEGDRDF-MWQANIKSIIAT 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G D++ + G+++ D+ GRGGT+++ IE+ R D QDW Sbjct: 178 SQVPIVVKEVGNGFIREDLQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFA-YLQDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL AR +A+GG+R+ +D++K++ LGA G++ L + +A Sbjct: 237 GQTTVESLLEARGL--GLTMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A ++ + LLG QEL ++ Sbjct: 295 TLAYFKNFLHQLRQLYALLGVTNWQELQEAPIVL 328 >gi|227498499|ref|ZP_03928645.1| isopentenyl-diphosphate delta-isomerase [Acidaminococcus sp. D21] gi|226903957|gb|EEH89875.1| isopentenyl-diphosphate delta-isomerase [Acidaminococcus sp. D21] Length = 349 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 106/339 (31%), Positives = 176/339 (51%), Gaps = 13/339 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK-LSFPLLI 61 RK+DHI G F D HL+H L I +EVD + G L+ P++I Sbjct: 5 ESRKLDHIRYAL-CVGDGPCASGFSDVHLLHHCLSGICRNEVDLTCLLPGLPALAHPIII 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLI 120 +++TGG + + +IN +LAI A +T AMAVGSQ S+ +R+ P ++ Sbjct: 64 NAITGGAD-AVAKINESLAIVARETGSAMAVGSQFGTVRTGLHRDSYTIVRKCNPKGLIF 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NL A V++A A+ ++ AD L +HLNP QE+ G+ +F++ S I + Sbjct: 123 ANLSAFA-----SVEQAKAAIDMISADALQIHLNPAQELAMEEGDRDFSNCLSHIEAMVQ 177 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+++KE GCG++ + + L G+ DI G GGT++ IE R E + + Sbjct: 178 GVGVPVIVKETGCGMAKKEAQDLLDVGVTLLDIGGAGGTNFPAIEHQRYPEGN--EELSE 235 Query: 241 WGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSS 298 WGIPT LSL + + IASGG+R+ +D++K+ +LGAS +A L K + + Sbjct: 236 WGIPTVLSLLSVVQTVGWGNGVIASGGIRSALDVVKAQVLGASAVAMAGNLLQKIQQEGT 295 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + ++ L + + LLG + ++L+ + + Sbjct: 296 EETIHFLQRLLNKVLDFYTLLGCRTFRDLHEARYYLTGE 334 >gi|300173497|ref|YP_003772663.1| isopentenyl-diphosphate delta-isomerase [Leuconostoc gasicomitatum LMG 18811] gi|299887876|emb|CBL91844.1| isopentenyl-diphosphate delta-isomerase, type 2 [Leuconostoc gasicomitatum LMG 18811] Length = 351 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 171/334 (51%), Gaps = 13/334 (3%) Query: 5 RKIDHINI---VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ V + + F D + PE+S +V+ S L +P I Sbjct: 9 RKDEHLSLGVNVWRQNQRLQVGADFSDIRWLPNTFPEMSVADVNLSTTILNHHFDWPFYI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG++ + RIN LA A+KT +AMAVGSQ + + +A+ SF++ RQ P LI Sbjct: 69 EAMTGGSH-LTGRINGQLAQVAKKTNLAMAVGSQSIALKESDAVASFKIARQNNPEGFLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D + A+ ++ A+ + +H+N QE++ G+ F +A + + Sbjct: 128 ANLGA-----DHPIDNVRNAIDMIDANAIEMHVNVGQELVMAEGDREFY-WLENLATIIA 181 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G+S ++ + G ++ G GT+++ IE R+ + D Sbjct: 182 KSPVPVIIKEVGFGMSDQAFDIINQLGPAAVNVGGANGTNFAVIERRRNRQPDT-FNIDQ 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD- 299 +G+ T SL A+ N+ +A+GG+++ DI+ S++LGASL A L MD + Sbjct: 241 FGLSTVESLLSAQLVDNQVPLVATGGIQSANDIVTSLMLGASLTSSAGFMLATLMDRGET 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++ IE ++ LLG + V L L Sbjct: 301 ALIQQIEDWQRALPRLFTLLGAQNVASLQTAQRL 334 >gi|167396281|ref|XP_001741990.1| isopentenyl-diphosphate delta-isomerase [Entamoeba dispar SAW760] gi|165893186|gb|EDR21526.1| isopentenyl-diphosphate delta-isomerase, putative [Entamoeba dispar SAW760] Length = 371 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 185/346 (53%), Gaps = 15/346 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+DH+ + +D L P+ S + F K+LS PL+ Sbjct: 16 LTPSRKLDHLKFCRNNDTQSHQSTHLEDVILEKTCFPKQSLSSIQTQTNFFNKELSIPLI 75 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I +MTGG+N + + +N+ LAIAA +T VA+ VGSQR D ++S+ + R+ AP+ Sbjct: 76 IGAMTGGSNDV-KLVNKTLAIAANETNVAIGVGSQRSGLESHDEELLESYRVVRECAPNA 134 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +I N+G+VQL ++G + + ++ + + +HLN QE++Q G+ + D+ ++ Sbjct: 135 FIIGNIGSVQLT-EYG-EVLDDLISMIKGNAIAVHLNWEQELVQTEGDRSGTDV-PRLKE 191 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----- 232 + S + ++ K+VG G+ D+ + + G++ DIAG GGTS++ +E R E Sbjct: 192 IISKWNGTVIGKQVGHGMMKKDVMICQELGMKAVDIAGIGGTSFAGVECLRAQEKKQYQQ 251 Query: 233 -DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G + D+G+PT +S+ A IASGG+RNG DI+KS+ LGASL + PF+ Sbjct: 252 NRLGQLLWDFGVPTAMSIWEASQ--CSLPIIASGGIRNGFDIVKSMTLGASLASITKPFV 309 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + S+A V I S++ E +FL G V E + +I + Sbjct: 310 SLYSEGSEACVKYINSIKNEIQSLLFLCGCPSVNEAHSIPKIITGE 355 >gi|191638488|ref|YP_001987654.1| isopentenyl pyrophosphate isomerase [Lactobacillus casei BL23] gi|226707318|sp|B3WEJ5|IDI2_LACCB RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|190712790|emb|CAQ66796.1| Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (Isopentenyl pyrophosphate isomerase) [Lactobacillus casei BL23] gi|327382523|gb|AEA53999.1| Possible isopentenyl-diphosphate delta-isomerase [Lactobacillus casei LC2W] gi|327385720|gb|AEA57194.1| Possible isopentenyl-diphosphate delta-isomerase [Lactobacillus casei BD-II] Length = 344 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 103/334 (30%), Positives = 170/334 (50%), Gaps = 14/334 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K FD L+HRALPE + VD + L +P+ I+ Sbjct: 7 SHRKDEHVFLAEKYF-QSVAHAGFDQVRLLHRALPETTMAAVDLKPD-LPFNWQWPIYIN 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ + ++N L A+ VA+A GSQ V D + +F LR + P+ +++ Sbjct: 65 AMTGGSPQ-TGKLNAQLGQLAQALGVAIASGSQSVALRDPQLVPTFATLRDHDPNGFILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+GA A AV +L A+ L +HLN QE+I P G+ +F + I + + Sbjct: 124 NVGAGHHAT-----AAEAAVAMLKANALEIHLNAAQEVIMPEGDRDF-MWQANIKSIIAT 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 VP+++KEVG G D++ + G+++ D+ GRGGT+++ IE+ R D QDW Sbjct: 178 SQVPIVVKEVGNGFIREDLQSLQQLGVQFVDVGGRGGTNFATIENARRSGHDFA-YLQDW 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G T SL AR +A+GG+R+ +D++K++ LGA G++ L + +A Sbjct: 237 GQTTVESLLEARGL--GLAMLATGGVRSPLDVVKALRLGAHAVGMSGLVLHHLIQTGYEA 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A ++ + LLG QEL ++ Sbjct: 295 TLAYFQNFLHQLRQLYALLGVTNWQELQEAPIVL 328 >gi|42519133|ref|NP_965063.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii NCC 533] gi|41583420|gb|AAS09029.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii NCC 533] Length = 341 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 10/324 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++ F+ HLI ALPE + S E G +S P I+ Sbjct: 5 SQRKEEHLALAKMFFNSNK-DNDFNHVHLIRPALPESAISRDSISTEMFGHTISTPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ IN+ LA AA + MA+GS ++ + + I+SFE+ RQ P ++ + Sbjct: 64 AMTGGSD-TSYTINQRLAKAAAAENIPMALGSASILEKEIDQIESFEVARQENPDGLIFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A + V L A+ L +HLN +QE + P G+ +F + + Sbjct: 123 NV-----NPTTDPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFH-WIDNLKEIRDT 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 177 VDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKTQKLNF-LEDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A S+ + Sbjct: 236 GLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQYASQDSETL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQ 325 +AAI++L+ E + L G + Sbjct: 296 IAAIQNLKYELKLLTALFGLDHIS 319 >gi|330718592|ref|ZP_08313192.1| isopentenyl pyrophosphate isomerase [Leuconostoc fallax KCTC 3537] Length = 327 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 14/327 (4%) Query: 3 NDRKIDHINIVCKDPGIDRN--KKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+++ FDD + ALPE++ +V+ S L + S+P Sbjct: 7 SHRKDEHLSLGVHSWRQQPQIIGATFDDVRWVPNALPELTVQDVNTSTVMLNHRFSWPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I +MTGG+ K +IN+ LA A +T +AMAVGSQ + + + +SF+ +R+ L Sbjct: 67 IEAMTGGSQKTT-QINQQLAEVALETDLAMAVGSQSIAIKEPDKRESFKIVRKTHQDGFL 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ--PNGNTNFADLSSKIAL 177 I+NLGA + + A+ ++ A+ + LHLN QE+ G+ +F IA Sbjct: 126 IANLGA-----NHNIINVRNAIDMIDANAIELHLNVAQELTMSEHEGDRSFY-WLDNIAT 179 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 +++ VP+++KEVG G+S L +G+ ++ G GT++++IE+ R+ + + + Sbjct: 180 IAAKSPVPVIVKEVGFGMSQATFNLLQDTGVAAINVGGANGTNFAKIENRRNQDK-LKLN 238 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-D 296 ++G T SL A+ N IA+GG++ D++ S++LGA+L A FL + Sbjct: 239 LDNYGFSTVESLLDAKMSQNTLPLIATGGIQKIQDVITSLMLGATLTSSAGYFLHTLVSK 298 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKR 323 DA+V I ++ + LLG K+ Sbjct: 299 GQDALVHTINEWQQNLPLIYALLGAKK 325 >gi|227890032|ref|ZP_04007837.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii ATCC 33200] gi|227849476|gb|EEJ59562.1| isopentenyl pyrophosphate isomerase [Lactobacillus johnsonii ATCC 33200] Length = 345 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 171/324 (52%), Gaps = 10/324 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++ F+ HLI ALPE + S E G ++S P I+ Sbjct: 9 SQRKEEHLALAKMFFNSNK-DNDFNHVHLIRPALPESAVSRDSISTEMFGHQISAPFFIN 67 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ IN+ LA AA + MA+GS ++ + + IKSFE+ RQ P ++ + Sbjct: 68 AMTGGSD-TSYTINQRLAKAAAAENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFA 126 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A + V L A+ L +HLN +QE + P G+ +F + + Sbjct: 127 NV-----NPTTDPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFH-WIDNLKEIRDT 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 181 IDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKTQKLNF-LEDI 239 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A S+ + Sbjct: 240 GLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETL 299 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQ 325 +AAI++L+ E + L G + Sbjct: 300 IAAIQNLKYELKLLTALFGLDHIS 323 >gi|119094152|gb|ABL60982.1| isopentenyl-diphosphate delta-isomerase Idi [uncultured marine bacterium HF10_19P19] Length = 339 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 12/336 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + DRK H+++ + D L + ALPE + V + EFLG +L PL+ Sbjct: 8 LTTDRKNAHLDLAKTSQPLA--DHPLDAVSLPYCALPECDLNRVSLTTEFLGIELDSPLI 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I+ MTGG ++ + INR LA A+K KVA+ +GSQR + ELR+ AP VLI Sbjct: 66 ITGMTGGTDRAMA-INRVLADTAQKKKVALGLGSQRASLESGQSQA--ELRRLAPDAVLI 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 NLG QL G++ A AV + AD L +HLNPLQE IQP G+ ++ + S I Sbjct: 123 GNLGGAQLAGKDGLKLARAAVEDIRADALAIHLNPLQEAIQPEGDHDWRGVLSAIETAVG 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV--F 238 ++ P+L+KEVG GLS + G+R+ D+A RGGT+W++IE +R E+D F Sbjct: 183 TLNCPVLVKEVGAGLSGNVVRRLAAIGVRHVDVAARGGTNWAQIELNRRPETDRAHYAPF 242 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-- 296 G+ P ++ AR N IASGG+R+G+D K + LGA L G+A L+ D Sbjct: 243 LSCGLMLPDAIAQARAVSNHLCIIASGGVRHGLDAAKCLWLGADLVGMAGHILRTVEDNA 302 Query: 297 ---SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + +++++ +S+FL G ++ Sbjct: 303 GHLHPKQLSDLLYTVQQQLRLSLFLAGKSSIKAFKR 338 >gi|67478626|ref|XP_654698.1| isopentenyl-diphosphate delta-isomerase [Entamoeba histolytica HM-1:IMSS] gi|56471765|gb|EAL49309.1| isopentenyl-diphosphate delta-isomerase, putative [Entamoeba histolytica HM-1:IMSS] Length = 358 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 190/346 (54%), Gaps = 15/346 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK+DH+ C + +D L P+ S + + F K+LS PL+ Sbjct: 3 LTPSRKLDHLKFCCNNETQSHQSNHLEDIILEKTCFPKQSLSSIQTKINFFNKELSIPLI 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I +MTGG+N + + +N+ LAIAA +T VA+ VGSQR D ++S+ + R+ AP+ Sbjct: 63 IGAMTGGSNDV-KIVNKTLAIAANETNVAIGVGSQRSGLESNDEEILESYRVVRECAPNA 121 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +I N+G+VQL ++G + + ++ D + +HLN QE++Q G+ N D+ ++ Sbjct: 122 FIIGNIGSVQLT-EYG-EVLDDLIAMIKGDAIAVHLNWEQELVQAEGDRNGIDVC-RLKE 178 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----- 232 + S + ++ K+VG G+ D+ + + G++ DIAG GGTS++ +E R E Sbjct: 179 IISKWNGTVIGKQVGHGMMKKDVMICQELGMKAVDIAGIGGTSFAGVECLRAKEKKQYQQ 238 Query: 233 -DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +G + D+G+PT +S+ A IASGG+RNG++I+KS+ LGASL + PF+ Sbjct: 239 NRLGQLLWDFGVPTAMSIWEASQ--CSLPIIASGGIRNGLEIVKSMTLGASLASITKPFV 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ S+A + + ++ E S+FL G V E++ +I + Sbjct: 297 SLYLEGSEACINYVNFIKNEIQSSLFLCGCPSVNEVHSIPKIITGE 342 >gi|218296797|ref|ZP_03497503.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermus aquaticus Y51MC23] gi|218242886|gb|EED09420.1| isopentenyl-diphosphate delta-isomerase, type 2 [Thermus aquaticus Y51MC23] Length = 335 Score = 305 bits (781), Expect = 8e-81, Method: Composition-based stats. Identities = 114/324 (35%), Positives = 172/324 (53%), Gaps = 5/324 (1%) Query: 4 DRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 +RK H+ + + + + L ++AL ++ EVD + FLGK L P LI Sbjct: 5 ERKRKHLEACLHGEVAFQKTTTGLERFRLRYQALSGLALSEVDLTTPFLGKTLKAPFLIG 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 +MTGG ERIN LA AAE V M +GS R++ A++SF++R+ AP +L++N Sbjct: 65 AMTGGEEN-GERINLALAEAAEALGVGMMLGSGRIVLERPEALRSFQVRKVAPKALLVAN 123 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG QL +G + + V +L AD L LH+NPLQE +Q G+T+F L +++ + Sbjct: 124 LGLAQLRR-YGREDLVRLVEMLEADALALHVNPLQEAVQ-RGDTDFRGLLARLRA-LLPL 180 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P+L+KEVG GLS + D+AG GGTSW+R+E + G Sbjct: 181 PFPVLVKEVGHGLSREAALALRGLPLAAVDVAGAGGTSWARVEEWVRYGEVRHPELCEMG 240 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 +PT ++ R E IASGG+ G D K++ LGA L +A P L+PA+ ++A Sbjct: 241 VPTAQAILEVREVLPEVPLIASGGVYTGTDAAKALALGADLVAVARPLLRPALMGAEAAA 300 Query: 303 AAIESLRKEFIVSMFLLGTKRVQE 326 A I +E ++F +G +R E Sbjct: 301 AWIADYLEELRTALFAVGARRPVE 324 >gi|268319450|ref|YP_003293106.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii FI9785] gi|262397825|emb|CAX66839.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus johnsonii FI9785] Length = 341 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 10/324 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + ++ F+ HLI ALPE + S E ++S P I+ Sbjct: 5 SQRKEEHLALAKMFFNSNK-DNDFNHVHLIRPALPESAVSRDSISTEMFDHQISAPFFIN 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG++ IN+ LA AA + MA+GS ++ + + IKSFE+ RQ P ++ + Sbjct: 64 AMTGGSD-TSYTINQRLAKAAAAENIPMALGSASILEKEIDQIKSFEVARQENPDGLIFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A + V L A+ L +HLN +QE + P G+ +F + + Sbjct: 123 NV-----NPTTDPKVAQKIVDALDANALQIHLNSVQEAVMPEGDRDFH-WIDNLKEIRDT 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G+ + L + D+ G GGT++++IE+ R + +D Sbjct: 177 VDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKTQKLNF-LEDI 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 G+ T +L AR IA+GG+ N +DI KS++LGA G+A+ FL+ A S+ + Sbjct: 236 GLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFASQDSETL 295 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQ 325 +AAI++L+ E + L G + Sbjct: 296 IAAIQNLKYELKLLTALFGLDHIS 319 >gi|294790201|ref|ZP_06755359.1| isopentenyl-diphosphate delta-isomerase, type 2 [Scardovia inopinata F0304] gi|294458098|gb|EFG26451.1| isopentenyl-diphosphate delta-isomerase, type 2 [Scardovia inopinata F0304] Length = 354 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 26/338 (7%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + R D IH +LPEIS D+VD S + G + + P I++MTGG + I Sbjct: 3 EEYQGRVYDELDSCEFIHTSLPEISIDQVDISTDLAGIRQNKPFFINAMTGGTE-LTNEI 61 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGV 134 N LA A +T MA+GS ++ + L+Q P I+NLGA + Sbjct: 62 NMKLAQVAGRTGTLMALGSMSILVKKPQVRDLYRRLKQENPQVSFIANLGA-----EHSP 116 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS---SAMDVPLLLKEV 191 + A V + A L +H+NP QEI+ P G+ +F I ++ +P++ KEV Sbjct: 117 ESALAVVEAVDAQALQIHINPAQEIVMPEGSRDFRGWVDNITNIAIAMRERSIPVIAKEV 176 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR----------DLESDIG----IV 237 G G+S ++ ++GI Y D+AG+GGT++ IE+ R E +G Sbjct: 177 GFGMSRQTAQILKEAGITYIDVAGKGGTNFITIENARLREKQGRSSGQTEPRLGISDFSY 236 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-D 296 + WGI T SL R IASGG+RN +D +K + LGA GL+ FL M Sbjct: 237 LKSWGISTLRSLIEVRGVEGIVP-IASGGVRNPLDAIKYLALGARTIGLSGIFLDSVMTR 295 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V +E+ + LLG + +QEL + ++ Sbjct: 296 GIEGTVDLVETWQDHIQRIFTLLGVRTIQELQEKSRMV 333 >gi|284048575|ref|YP_003398914.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidaminococcus fermentans DSM 20731] gi|283952796|gb|ADB47599.1| isopentenyl-diphosphate delta-isomerase, type 2 [Acidaminococcus fermentans DSM 20731] Length = 350 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 103/334 (30%), Positives = 164/334 (49%), Gaps = 13/334 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLI 61 RKIDHI F D ++H LP++ +VD SV G LS PL+I Sbjct: 5 ESRKIDHIKYALHLED-GPCATGFSDMQVMHCCLPQVDRRKVDLSVSLPGVGTLSQPLVI 63 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 ++TGG ++ INR+LA+ A +T AMAVGSQ ++++ R+ P V+ Sbjct: 64 DAITGGAE-AVKSINRDLAVVARETGCAMAVGSQYGAVRKGLYADTYQVVRRENPKGVVF 122 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+ A+ ++A +AV ++ A L +HLN QE+ G+ +F+ +IA + S Sbjct: 123 ANVSALA-----TPEEARRAVDMVEAQALEIHLNSAQELAMEEGDRDFSRWLEQIAAICS 177 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +VP+++KE GCG++ + L G+ D G GGT++ IE R E + Sbjct: 178 QSEVPVIVKETGCGMAREEARRLLDCGVSILDTGGAGGTNFPAIEGCRYPEGNR--ELSQ 235 Query: 241 WGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 WGIP+ LSL + IASGG+R+ +D+ ++ +LGA+ G+A L+ + Sbjct: 236 WGIPSALSLLETVEAKGWQNGIIASGGIRSALDVFRAQVLGANAVGMAGNILRLVREGGT 295 Query: 300 AV-VAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + I L + L G R EL Sbjct: 296 LLAIQRIRQLLEAVKDFYTLTGCTRGTELRQVRY 329 >gi|326692555|ref|ZP_08229560.1| isopentenyl pyrophosphate isomerase [Leuconostoc argentinum KCTC 3773] Length = 351 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCKDPGIDRNK---KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ K N F D + PE++ E D +P I Sbjct: 9 RKDEHLSLGVKLWRQQENNPIGATFADVRWLPATFPEMAVAEADVHTTLFNHTFDWPFYI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG++ + RIN LA A+KT +AMAVGSQ + + A ++F++ R+ P LI Sbjct: 69 EAMTGGSS-LTGRINGQLASVAQKTGLAMAVGSQSIALKEPEAAQTFKIAREMHPDGFLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D + A++++ A+ + LH+N QE + G+ F +A + + Sbjct: 128 ANLGA-----DHPIAHVRDAINMIDANAIELHVNVAQESVMAEGDRAFY-WLDNLATVIA 181 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G+S + + ++ G GT+++ IE R+ ++D Sbjct: 182 KSPVPVIIKEVGFGMSQSAFDTLKQLQPAAINVGGANGTNFAVIERRRNRQAD-NFNIDQ 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD- 299 +G+ T SL A+ N IA+GG+ + D++ S++LGA++ A L M + Sbjct: 241 FGLSTVESLLSAQLAQNTLPVIATGGIASANDVITSLMLGATMTSSAGYMLNTLMTHGET 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ I S ++ M LLG + + EL L Sbjct: 301 GLIDEIISWQRALPRLMTLLGARHISELQSKPRL 334 >gi|320101531|ref|YP_004177123.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfurococcus mucosus DSM 2162] gi|319753883|gb|ADV65641.1| isopentenyl-diphosphate delta-isomerase, type 2 [Desulfurococcus mucosus DSM 2162] Length = 372 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 183/348 (52%), Gaps = 14/348 (4%) Query: 2 VNDRKIDHINIVCKDPG--IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 V RK+ HI + D + + L+HRA P +VD S+EFLG +L PL Sbjct: 4 VQSRKLHHIEVALDPRVDFEDNCSDLYREIQLVHRAFPGFELGDVDSSLEFLGYRLEAPL 63 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKSFEL-RQYAP 115 +I+ MTGG+ + INR LA AEK +VA+ VGSQR + + + + S+ + R A Sbjct: 64 MITGMTGGHPSLTG-INRALAELAEKKRVAIGVGSQRAIVTSGFREDVVASYRVVRDVAR 122 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSK 174 +I N+G LN D + V VL AD L +HLNP QE+IQP G+T F L K Sbjct: 123 DVPVIGNIGLNTLN-DVEYDTIVKLVEVLEADALAIHLNPAQEVIQPEGDTRFNHRLLEK 181 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD----L 230 + L + P+++KEVG GLS +++ +G+R +D+AG GT+W+ +E+ R+ Sbjct: 182 VRELVKTLGKPVIVKEVGNGLSMETVKVFHDAGVRIYDVAGACGTNWALVEALRNQPGTP 241 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG-LASP 289 + GI+ WGIPTPLS+ R ++ IASGG+ +G +I+LGA + G Sbjct: 242 RYECGIMLAKWGIPTPLSVIETRFTATDSFIIASGGVWDGFKAAVNIVLGADMAGLAKPL 301 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 K + +++ E +MFL G + ++EL ++ + Sbjct: 302 LKKLLKEGLKQAETYLDTYVFELKTAMFLSGARTLRELREAPVILGGR 349 >gi|170016977|ref|YP_001727896.1| L-lactate dehydrogenase (FMN-dependent) [Leuconostoc citreum KM20] gi|169803834|gb|ACA82452.1| L-lactate dehydrogenase (FMN-dependent) [Leuconostoc citreum KM20] Length = 353 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 13/334 (3%) Query: 5 RKIDHINIVCK---DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 RK +H+++ ++D + PE++ + D SV+ +P I Sbjct: 9 RKDEHLSLGVNLWRQQNFLTPGASYEDVRWLPVVFPEMAVSDTDVSVDLFNHHFDWPFYI 68 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLI 120 +MTGG+ + RIN LA A T +AMAVGSQ + + + +F++ R+ P LI Sbjct: 69 EAMTGGSE-LTGRINSQLAEVARTTNLAMAVGSQSIALKEPDLASTFKVARKQHPDGFLI 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGA D ++ AV ++ A+ + +H+N QE++ G+ F +A + + Sbjct: 128 ANLGA-----DHPIENVRAAVDMIDANAIEMHVNVAQELVMAEGDREF-FWLDNLANVIA 181 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 VP+++KEVG G+S I+ + +I G GT+++ IE R+ +++ + Sbjct: 182 KSPVPVIIKEVGFGMSQSAIKTIQQLNPAAINIGGANGTNFAIIERRRNRQAETLNI-DQ 240 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 +G+ T SL A+ N+ IA+GG+++ D++ S++LGA+L A LK M D Sbjct: 241 FGLSTVESLISAQIMQNQYPIIATGGIQSANDVITSLMLGATLVSSAGFMLKTLMDDGQS 300 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+V IE + + LLG + QEL L Sbjct: 301 ALVQQIEGWQSALPRLLTLLGAQSNQELAEKQRL 334 >gi|162450032|ref|YP_001612399.1| isopentenyl pyrophosphate isomerase [Sorangium cellulosum 'So ce 56'] gi|161160614|emb|CAN91919.1| idi [Sorangium cellulosum 'So ce 56'] Length = 362 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 8/341 (2%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 +++RK DHI + D G + LIH ALPE+S D +D SV LGK+L PLL Sbjct: 8 ISERKADHIELCATGDVGFRAKTTLLEQVELIHDALPELSLDAIDTSVLLLGKRLRVPLL 67 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG + INR L+ AE+ +GSQR M + +A ++E+R +AP T+L+ Sbjct: 68 IAAMTGGTERA-HAINRELSRIAEERGYGFGLGSQRAML-NGDASATYEVRAHAPTTLLL 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+GAVQ + V +GAD L +H+NP E++QP G+ +FA + L+S Sbjct: 126 GNIGAVQ-ARSLSTEAVADLVAQVGADALCVHMNPAMELVQPGGDRDFAGALDAMGRLAS 184 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS--RIESHRDLESDIGIVF 238 + VP++ KE GCG+ +++G+R D++G GGTSW +G Sbjct: 185 GLSVPVVAKETGCGIGPGTAYRLVRAGVRDLDVSGAGGTSWVAVEAARAEGAARSLGEAL 244 Query: 239 QDWGIPTPLSLEMARPYCNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 ++WG+PT S+ +AR IA+GG+ +G+D+ +++ LGA G+A P L+ + Sbjct: 245 REWGVPTAASVLIARAIRPRFKTIIATGGITSGLDVARALALGAHAAGIARPVLQAFVSG 304 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 DA V +ES+ E M L+G + V L L+ + Sbjct: 305 GRDAAVRYLESVEAELRAVMLLVGARDVASLQKAPVLLGRE 345 >gi|323141763|ref|ZP_08076633.1| isopentenyl-diphosphate delta-isomerase, type 2 [Phascolarctobacterium sp. YIT 12067] gi|322413752|gb|EFY04601.1| isopentenyl-diphosphate delta-isomerase, type 2 [Phascolarctobacterium sp. YIT 12067] Length = 358 Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK++HI + G D +H LPEI+ + SVE LGK+L P I Sbjct: 8 AKRKLEHIQYAL-ELGDGPAATHLADLRFLHNCLPEINPADFVLSVEILGKRLRLPFFID 66 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 ++TG + + E INR LA A +T + MAVGSQ D + I S+ + R+ ++I Sbjct: 67 AITGSTDAVTE-INRKLAQVAARTGIGMAVGSQFGAVRDGSGIASYTVVREELAEGLVIG 125 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ A+ +A AV +L AD L +HLN QE+ G+ + L + + + A Sbjct: 126 NISALA-----TPAQAQAAVDMLQADALEVHLNAAQELWMAEGDKDTCGLLANLVQIRDA 180 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KE GCG+++ EL L+ G FD AG GGT++ IE+ R ++ F W Sbjct: 181 VSVPVIVKETGCGIAAEQYELLLEQGFTAFDCAGAGGTNFPAIEAKRQG-VELTEEFAAW 239 Query: 242 GIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSD 299 G+PT SL A+ A +ASGG+R+ D+ ++ LGA G+ +P L+ ++ D Sbjct: 240 GVPTCWSLLDAQQTLPQNALLLASGGIRSAGDVARAFALGADAVGITTPILRLIIEQGVD 299 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A +ESL + M LLG +EL ++ + Sbjct: 300 AAADYVESLAEGLQKYMLLLGCLTPKELRDVPLIVTGE 337 >gi|67527051|gb|AAY68320.1| hypothetical protein [uncultured marine bacterium 66A03] Length = 347 Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 120/334 (35%), Positives = 183/334 (54%), Gaps = 10/334 (2%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + + RK HI++ + D L H ALPE+ FD+VD S EFL K+LSFP + Sbjct: 10 ISSARKDIHIDLSKSELSRFNIVHPLDLITLPHNALPEMDFDDVDTSCEFLNKELSFPFM 69 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I+ MTGG + R+N A A + +A VGSQR ++ + K ELR+ AP +I Sbjct: 70 ITGMTGGTPR-GNRLNLAFAEVANQCGIAFGVGSQRSSIANCKSQK--ELRKLAPKIPII 126 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 N+G +QL G++ A A+ L AD L +HLNPLQEIIQP G +N+ + + I Sbjct: 127 GNIGGIQLAQKNGLELARAAIEDLEADALAIHLNPLQEIIQPEGESNWRGVLNSIEKAVK 186 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR--DLESDIGIVF 238 + P+L+KEVG G+S + G+ + D+A GGTSW+RIE+ R + + ++ F Sbjct: 187 TLPCPILVKEVGAGISLPVAKKLHNVGVYHIDVACAGGTSWARIEAERLPNSQRELYEPF 246 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 DWG L R + I SGGLRNG+D+ K + LG +GG AS LK Sbjct: 247 LDWGHLITDILPEMRQTLQQVTIIGSGGLRNGLDLAKLLYLGCHIGGGASLLLKSLETEE 306 Query: 299 -----DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++++++++ +S+FL G+ + +L Sbjct: 307 LEVKQEHLFQSLKTIKEQLSISLFLTGSNKADDL 340 >gi|15806107|ref|NP_294811.1| isopentenyl pyrophosphate isomerase [Deinococcus radiodurans R1] gi|6458821|gb|AAF10661.1|AE001959_1 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 286 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 110/283 (38%), Positives = 169/283 (59%), Gaps = 1/283 (0%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 FLG++L P+LI +MTGG K INRNLA AA + M +GSQRVM +A Sbjct: 3 LDTVFLGRRLKAPVLIGAMTGGAEKA-GVINRNLATAARNLGLGMMLGSQRVMLEHPDAW 61 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 +SF +R+ AP +LI NLGA Q +G ++A +AV + AD L +HLNPLQE +Q G+ Sbjct: 62 ESFNVREVAPEILLIGNLGAAQFMLGYGAEQARRAVDEVMADALAIHLNPLQEALQRGGD 121 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 T + ++ ++ ++ +D P+++KEVG GL + + +D+AG GGTSW+R+E Sbjct: 122 TRWQGVTYRLKQVARELDFPVIIKEVGHGLDAATLRALADGPFAAYDVAGAGGTSWARVE 181 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+PT +L AR AQ IASGG+R+G+D +++ LGA + Sbjct: 182 QLVAHGQVHSPDLCELGVPTAQALRQARKTLPGAQLIASGGIRSGLDAARALSLGAEVVA 241 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 +A P L+PA+DSS+A A + + +E V++F+ G + V+E+ Sbjct: 242 VARPLLEPALDSSEAAEAWLRNFIQELRVALFVGGYRDVREVR 284 >gi|304384903|ref|ZP_07367249.1| isopentenyl-diphosphate delta-isomerase [Pediococcus acidilactici DSM 20284] gi|304329097|gb|EFL96317.1| isopentenyl-diphosphate delta-isomerase [Pediococcus acidilactici DSM 20284] Length = 327 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 13/332 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+++ K F + L ALPE+ D+V + G + P I Sbjct: 6 SHRKDEHVSLAEKFYQPVA-YAGFTEIKLRPNALPEMGIDDVSLQTKLAGLPIEVPFFIQ 64 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ ++NR LA A +T +AMAVGSQ V +F++ R PH ++++ Sbjct: 65 AMTGGSP-TTAKLNRRLATIARETGLAMAVGSQSVALKYPELADTFQVVRNENPHGLILA 123 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 NLGA A +AV +L AD L LH+N QE++ P G+ +F + +I + +A Sbjct: 124 NLGADASVA-----AAKKAVAMLDADVLQLHINVAQELVMPEGDRSF-NYLEQIKAIQAA 177 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++K VG G++ D G+RY D+ G+GGT++ +IE+ R E D D Sbjct: 178 VSVPVVVKAVGAGMTRADALRLQSVGVRYIDVGGKGGTNFVQIENARRSEKDFAF-LTDL 236 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 G+ T SL+ A+GG+R D++KSI LGA G+A FL + +D Sbjct: 237 GLTTVESLKEVNGL--GLSVTATGGIRTPADVIKSIALGADNVGVAGYFLHQLLHHNDQE 294 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ IE + + M LLG ++ +L Sbjct: 295 IIDLIERWKYQLRCLMVLLGVTKLADLSERQL 326 >gi|225174806|ref|ZP_03728803.1| isopentenyl-diphosphate delta-isomerase, type 2 [Dethiobacter alkaliphilus AHT 1] gi|225169446|gb|EEG78243.1| isopentenyl-diphosphate delta-isomerase, type 2 [Dethiobacter alkaliphilus AHT 1] Length = 349 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 101/335 (30%), Positives = 172/335 (51%), Gaps = 12/335 (3%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK++H+ + D F D +L+H LPE S +D S G L PL I+++ Sbjct: 6 RKLEHLWHAVRS---DLTSADFCDINLVHNCLPETSLKALDLSTNLAGINLRLPLFINAI 62 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG E +NR LA+ A++ +A+AVGSQ + K+F + R+ P ++ +N+ Sbjct: 63 TGGVEDA-ECVNRELALTAKECGMALAVGSQMAALENPLYAKTFHVVREVYPDGIIFANI 121 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA V A +AV ++ AD L +HLN QE++ G+T+F +I + A+D Sbjct: 122 GAYS-----DVDMARRAVDMVRADALQIHLNVPQELMMKEGDTDFRGYRRQIEKIVGAVD 176 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG G++ + + G+ D+ G+GGT++ IE R + WGI Sbjct: 177 VPVIIKEVGFGVAREQAAIFKELGVAAIDVGGKGGTNFMLIE-RRRAHAKTNPDLLKWGI 235 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 PT +S+ A+ + +ASGGL +G+ K++ LGA+ G+A K + + + +V Sbjct: 236 PTAISILEAKAGAPDTDIVASGGLNSGLLAAKALALGANTVGIAGLAAKMLLAEGREKLV 295 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + E + M + G + EL ++ + Sbjct: 296 LCLNEMINEMKMIMVMTGAHNIAELREVPLVVTGE 330 >gi|55978293|ref|YP_145349.1| isopentenyl pyrophosphate isomerase [Thermus thermophilus HB8] gi|206582012|pdb|3DH7|A Chain A, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582013|pdb|3DH7|B Chain B, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582014|pdb|3DH7|C Chain C, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|206582015|pdb|3DH7|D Chain D, Structure Of T. Thermophilus Idi-2 In Complex With Ppi gi|55773466|dbj|BAD71906.1| isopentenyl-diphosphate delta-isomerase [Thermus thermophilus HB8] Length = 332 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 113/326 (34%), Positives = 172/326 (52%), Gaps = 5/326 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ERIN LA AAE V M +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAMTGGEEN-GERINLALAEAAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V +L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEMLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P+++KEVG GLS + D+AG GGTSW+R+E + Sbjct: 180 -LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCE 238 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 239 IGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAER 298 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G + +E Sbjct: 299 VAAWIGDYLEELRTALFAIGARNPKE 324 >gi|309804007|ref|ZP_07698089.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 11V1-d] gi|308163926|gb|EFO66191.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 11V1-d] Length = 341 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 171/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIKTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q V L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 VNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEIPHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + + M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLVTLMALFGINKLDDVKKVKYYLSLE 333 >gi|269122809|ref|YP_003305386.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptobacillus moniliformis DSM 12112] gi|268314135|gb|ACZ00509.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptobacillus moniliformis DSM 12112] Length = 312 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 90/326 (27%), Positives = 167/326 (51%), Gaps = 21/326 (6%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 +RK DH+ K FD++ L + ++P +++D + +P I+S Sbjct: 2 NRKDDHLKFALDSM---SKKNGFDEYMLEYISIPSFGLNDIDTRTKIGEVVFEYPFFINS 58 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 +TGG+ K ++IN++L +EKT + + GS + P N Sbjct: 59 ITGGSEK-GDKINKDLEYVSEKTGIFLFPGSYSPFLNKEEV--------SYPK-----NQ 104 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G V L D V +A+ A L +H+N +QEI+ P G NF S + + S + Sbjct: 105 G-VNLGIDKPVNLHLEAISKTNAKFLQVHVNLIQEIVMPEGERNFETWESNLKDILSTVK 163 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P++LKE G G+ + G++ DI+G+GGT++++IE+ R + +++ G Sbjct: 164 IPVILKETGFGMGRGSFIKAKELGVKILDISGKGGTNFAQIENRRRNKEK--KYYEEIGY 221 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVV 302 T SLE+A+ + ++ + IASGG+R+ +D++K++ LGA G++ FL+ ++ DA++ Sbjct: 222 YTTESLEIAKEFKDDFEIIASGGIRHPLDVVKALALGAKAVGISKTFLEILEVNGRDALI 281 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELY 328 I + +++ M L +K ++EL Sbjct: 282 DTINTWKEDIRNIMLLTDSKNIEELR 307 >gi|34327948|dbj|BAC82425.1| hypothetical protein [Sulfolobus acidocaldarius] Length = 307 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 176/284 (61%), Gaps = 8/284 (2%) Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTV 118 +I+ MTGG N++ RIN +A E+ +AM VGSQR+ ++F++ R+ AP++ Sbjct: 1 MITGMTGGTNEL-GRINGIIAEVIEEIGIAMGVGSQRIAIEKPEVRETFKIARRNAPNSP 59 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIAL 177 +I+NLGA QL +G+++ +AV +L AD + +H NP QE+ QP G ++ ++ KI Sbjct: 60 IIANLGAPQLTRGYGLKQIEEAVQMLEADAIAIHFNPSQEVFQPEGEPDYPMEILDKIRD 119 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLES 232 +S A+ VP+++KE GLS + L +G RYFD++G+GGTSW +E R + ++ Sbjct: 120 VSKALSVPIIIKESSGGLSKEFVSLFYSNGFRYFDLSGQGGTSWVAVEMFRGLRRNNWKA 179 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + +F DWGIPT ++ R +A I SGG+RNG++++KSI LGA++GG A P LK Sbjct: 180 ESAKLFSDWGIPTAATIIETRVSAPDAFVIGSGGVRNGLEVVKSISLGANIGGFALPALK 239 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ +A+ ++ + E +MFL+G+K V+++Y +I Sbjct: 240 AAIRGKEALKQFLQQVIFEIKAAMFLIGSKTVRDVYKTPLVIHG 283 >gi|325912109|ref|ZP_08174507.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 143-D] gi|325476059|gb|EGC79227.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 143-D] Length = 341 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIKTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q + L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 INVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEIPHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + I+ M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLIILMALFGINKLDDVKKVKYYLSLE 333 >gi|325912640|ref|ZP_08175023.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 60-B] gi|325478061|gb|EGC81190.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners UPII 60-B] Length = 341 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDAEFSGINLIRPALPESKISSDSIQTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q + L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFY-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 INVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL FIASGG+ N ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLKEIPHVNFIASGGINNSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + I+ M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLIILMALFGINKLDDVKKVKYYLSLE 333 >gi|309805045|ref|ZP_07699101.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 09V1-c] gi|315653559|ref|ZP_07906479.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners ATCC 55195] gi|329920285|ref|ZP_08277069.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 1401G] gi|308165636|gb|EFO67863.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 09V1-c] gi|315488921|gb|EFU78563.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners ATCC 55195] gi|328936330|gb|EGG32778.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 1401G] Length = 341 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIKTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q + L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 INVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + + M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLVTLMALFGINKLDDVKKVKYYLSLE 333 >gi|309806220|ref|ZP_07700234.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 03V1-b] gi|308167367|gb|EFO69532.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 03V1-b] Length = 341 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIKTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q V L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 VNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + + M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLVTLMALFGINKLDDVKKVKYYLSLE 333 >gi|312872905|ref|ZP_07732965.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2062A-h1] gi|311091427|gb|EFQ49811.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2062A-h1] Length = 341 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIQTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q V L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 VNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + I+ M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLIILMALFGINKLDDVKKVKYYLSLE 333 >gi|309809860|ref|ZP_07703710.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 2503V10-D] gi|308169812|gb|EFO71855.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners SPIN 2503V10-D] Length = 341 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIQTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q + L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFY-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 INVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + + M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLVTLMALFGINKLDDVKKVKYYLSLE 333 >gi|46255138|ref|YP_006050.1| isopentenyl pyrophosphate isomerase [Thermus thermophilus HB27] gi|46197987|gb|AAS82397.1| isopentenyl-diphosphate delta-isomerase [Thermus thermophilus HB27] Length = 332 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 114/326 (34%), Positives = 171/326 (52%), Gaps = 5/326 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALGEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I +MTGG ERIN LA AAE V M +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAMTGGEEN-GERINLALAEAAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEALEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P+++KEVG GLS + D+AG GGTSW+R+E + Sbjct: 180 -LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCE 238 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 239 IGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAER 298 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G K +E Sbjct: 299 VAAWIGDYLEELRTALFAIGAKNPKE 324 >gi|259500609|ref|ZP_05743511.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners DSM 13335] gi|302191298|ref|ZP_07267552.1| isopentenyl pyrophosphate isomerase [Lactobacillus iners AB-1] gi|312875629|ref|ZP_07735630.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2053A-b] gi|259167993|gb|EEW52488.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus iners DSM 13335] gi|311088883|gb|EFQ47326.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2053A-b] Length = 341 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 173/338 (51%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIKTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A++ +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKEENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q + L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVAEQIIKELQADALQIHLNAVQEAAMTEGDRDFY-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 INVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + I+ M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLIILMALFGINKLDDVKKVKYYLSLE 333 >gi|227892526|ref|ZP_04010331.1| isopentenyl pyrophosphate isomerase [Lactobacillus ultunensis DSM 16047] gi|227865647|gb|EEJ73068.1| isopentenyl pyrophosphate isomerase [Lactobacillus ultunensis DSM 16047] Length = 344 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + + FD HL+ ALPE + D + E K +S P Sbjct: 8 IRSERKEEHLKLAQMFFN-KQKYNSFDQLHLLRPALPETNVDPTILTTEMFNKSVSAPFF 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ K + +N+ L A K K+A+A+GS ++ + + + SF + R P +L Sbjct: 67 INAMTGGSPK-SKIVNQALGKVAAKEKIALALGSASILAKEDDQLDSFYVARSKNPDGIL 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + V+ H+ + L AD L +HLN +QEI P G+ +F I + Sbjct: 126 IVNV-----NPETPVKAIHKIIQELNADALQIHLNTVQEIAMPEGDRDFH-WLDNIKEIC 179 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +++P+++KEVG GL I + GI+YFDIAG GGT++++IE+ R+ + Sbjct: 180 NQVNIPIIIKEVGFGLDQNTIHILKNEGIQYFDIAGSGGTNFAQIENARNKNDV--SYLE 237 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSS 298 D G+PT +S MA+ + FI SGG+RN +DILK + L G+++ FL+ + Sbjct: 238 DIGLPTVISALMAKK--EQVNFIVSGGVRNPLDILKGLTLSGQYIGISNVFLQEFNQNGI 295 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D + I S +K+ + + G K + L Sbjct: 296 DGLENLIASWKKQLAALIAIYGKKDLASL 324 >gi|312871695|ref|ZP_07731783.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 3008A-a] gi|312874216|ref|ZP_07734250.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2052A-d] gi|311090286|gb|EFQ48696.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 2052A-d] gi|311092637|gb|EFQ50993.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LEAF 3008A-a] Length = 341 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 12/338 (3%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIQTNFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+++ E INR LA A+K +AMA+GS ++ + +KSF + R+ P +L++ Sbjct: 64 AMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPEQLKSFVIAREINPTGILLA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + + A Q V L AD L +HLN +QE G+ +F I + Sbjct: 123 NINPLTK-----PKVADQIVKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQL 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++VPL++KEVG GL ++ K GI YFD+ G GGT++ IE+ R D + D Sbjct: 177 VNVPLIIKEVGMGLDPFSVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDL 235 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SD 299 G+ T SL + FIASGG+ + ++I KS++LGA G+A+ FL +M Sbjct: 236 GLSTVKSLLSNLQEISHVNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGT 295 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A+++ I+ L+ + I+ M L G ++ ++ + + Sbjct: 296 ALISEIQKLKYQLIILMALFGINKLDDVKKVKYYLSLE 333 >gi|308270707|emb|CBX27317.1| hypothetical protein N47_H21390 [uncultured Desulfobacterium sp.] Length = 338 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 123/325 (37%), Positives = 193/325 (59%), Gaps = 8/325 (2%) Query: 6 KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 K HI + K + L ALP+ F E+D EFLGK LS PLLI+ +T Sbjct: 13 KSRHIKVCLKHDVQTTVSNGLEKVRLT-VALPDFLFSEMDLQCEFLGKTLSLPLLIAPLT 71 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 GG + RINRNLA AAE+ +AMAVGSQ++M + ++ S+ LR AP+ L++N+G Sbjct: 72 GGCG-LSRRINRNLAEAAERMGLAMAVGSQKLMLDNISSPDSYLLRDIAPNIPLLANVGL 130 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 V + G +AV + ADGL L++NPL E++Q G +F L ++ +S+ P Sbjct: 131 VHVKR--GKDYLLKAVESIEADGLILYINPLHEVLQEGGEKDFRGLLEELEKISADFPYP 188 Query: 186 LLLKEVGCGLSSMDIE-LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 ++LKEVG G+ ++ K+GIR D+AG GGT+W+RIE ++ +++ GI Sbjct: 189 IMLKEVGTGIPESVVKWAAAKNGIRGVDVAGLGGTNWARIEGLISGQN--YELYESLGIE 246 Query: 245 TPLSLEMARPYCNEAQ-FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 T S+ +AR + + Q IASGG+RNGV+I K++ +GA+L +A PFL A S + ++ Sbjct: 247 TAESILIARKHLRDEQYLIASGGIRNGVEIAKALAMGANLVSMALPFLLWASHSLEEIIK 306 Query: 304 AIESLRKEFIVSMFLLGTKRVQELY 328 + +L+KE V+M+ +G+ ++++ Sbjct: 307 GVSALKKELQVAMWCMGSINIKDMR 331 >gi|319440912|ref|ZP_07990068.1| isopentenyl pyrophosphate isomerase [Corynebacterium variabile DSM 44702] Length = 377 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 171/352 (48%), Gaps = 27/352 (7%) Query: 5 RKIDHINIV-----CKDPGIDRNKKF---FDDWHLIHRALPEISFDEVDPSVEFLGKKLS 56 RK +H+ + +D G+ R +DD +H + P SFD V G+ + Sbjct: 12 RKDEHVRLAEELRELRDAGVVRGVSPHGVWDDVRFMHHSFPGGSFDGVSLKTSVCGRDWA 71 Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAP 115 P I++MTGG+ K IN +LA AA T VAMA GS D + SF + R+ AP Sbjct: 72 VPFYINAMTGGSEKTA-LINADLARAAAATGVAMATGSASPALKDPSLAHSFAVVRENAP 130 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 L +N+ + V++A AV L AD L +H+NP QE++ P G+ +F+ ++ Sbjct: 131 DAFLFANVS-----PEMTVEQARDAVGFLDADALQVHVNPAQELVMPEGDRDFSGWLDRL 185 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + + +DVP+++KEVG GLS+ + + G+R D++GRGGT++ IE+ R + + Sbjct: 186 SDIVDGVDVPVVVKEVGFGLSARSVAEVVARGVRTIDVSGRGGTNFIDIENRRREKQEY- 244 Query: 236 IVFQDWGIPTPLSLEMAR----------PYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 WG L + Q +ASGG+ +D+++++ LGAS G Sbjct: 245 TYLSGWGQTAAECLLDLQGSPVMLPRDVSEGEPVQVLASGGVSTPLDVVRALSLGASAVG 304 Query: 286 LASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ FL M D D ++ I + M LLG V EL L+ Sbjct: 305 VSGHFLHVLMTDGLDTLIDEITEWIAQVRTLMTLLGAASVAELRQVDVLVTG 356 >gi|295424862|ref|ZP_06817577.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus amylolyticus DSM 11664] gi|295065428|gb|EFG56321.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus amylolyticus DSM 11664] Length = 338 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 99/327 (30%), Positives = 170/327 (51%), Gaps = 14/327 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 ++RK +H+ + + + FD HL+ LPE D+ FLGK++S P I Sbjct: 5 SERKEEHLALAQMFFN-KQKENSFDQMHLLRPTLPESKVDQASIRTSFLGKEVSAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ K ++INR L A K +A+A+GS ++ ++ + SF + R+ P +L + Sbjct: 64 AMTGGSEK-SKKINRQLGSVAAKENIALALGSASILVKENEQLSSFTVAREQDPDGLLFA 122 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ + A + V L AD L +HLN +QE P G +F + + + A Sbjct: 123 NVNPLT-----PASDAAKIVQELQADALQIHLNVVQEAAMPEGERDFC-WLNNMLEIRQA 176 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + VP+++KEVG G ++ +G FDI G GGT++++IE+ R+ + Sbjct: 177 VTVPIIIKEVGFGFDQASLKKLKDAGFDLFDIGGMGGTNFAQIENSRNQYN--LSYLSSL 234 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 G+PT ++ +A + F SGG+RN +D+LK + LG L G+A+ FL+ M ++ Sbjct: 235 GLPTVITSLIAEKM--QLDFFVSGGVRNPLDVLKGLALGGKLVGIANTFLQQLMQHDTEG 292 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ I+ +KE + + + G V L Sbjct: 293 LIEEIQEWKKELAILLAVFGKNDVNSL 319 >gi|70605941|ref|YP_254811.1| isopentenyl pyrophosphate isomerase [Sulfolobus acidocaldarius DSM 639] gi|68566589|gb|AAY79518.1| isopentenyl-diphosphate delta-isomerase [Sulfolobus acidocaldarius DSM 639] Length = 303 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 106/280 (37%), Positives = 173/280 (61%), Gaps = 8/280 (2%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG N++ RIN +A E+ +AM VGSQR+ ++F++ R+ AP++ +I+N Sbjct: 1 MTGGTNEL-GRINGIIAEVIEEIGIAMGVGSQRIAIEKPEVRETFKIARRNAPNSPIIAN 59 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-DLSSKIALLSSA 181 LGA QL +G+++ +AV +L AD + +H NP QE+ QP G ++ ++ KI +S A Sbjct: 60 LGAPQLTRGYGLKQIEEAVQMLEADAIAIHFNPSQEVFQPEGEPDYPMEILDKIRDVSKA 119 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR-----DLESDIGI 236 + VP+++KE GLS + L +G RYFD++G+GGTSW +E R + +++ Sbjct: 120 LSVPIIIKESSGGLSKEFVSLFYSNGFRYFDVSGQGGTSWVAVEMFRGLRRNNWKAESAK 179 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F DWGIPT ++ R +A I SGG+RNG++++KSI LGA++GG A P LK A+ Sbjct: 180 LFSDWGIPTAATIIETRVSAPDAFVIGSGGVRNGLEVVKSISLGANIGGFALPALKAAIR 239 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A+ ++ + E +MFL+G+K V+++Y +I Sbjct: 240 GKEALKQFLQQVIFEIKAAMFLIGSKTVRDVYKTPLVIHG 279 >gi|228964573|ref|ZP_04125682.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795107|gb|EEM42604.1| Isopentenyl-diphosphate delta-isomerase [Bacillus thuringiensis serovar sotto str. T04001] Length = 287 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 9/276 (3%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG + IN LA A++ +AMAVGSQ D + S+++ R+ P+ + +N Sbjct: 1 MTGGGGEKTLHINEQLAYVAKQHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFAN 60 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 61 LGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNS 115 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ G+ DI G+GGT+++ +E+ R + F +WG Sbjct: 116 KVPVIVKEVGFGMSKETMQQLANVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNWG 173 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 I T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + + Sbjct: 174 IQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKL 233 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V IE L + M LG K ++EL +++ + Sbjct: 234 VDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 269 >gi|296502168|ref|YP_003663868.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis BMB171] gi|296323220|gb|ADH06148.1| isopentenyl pyrophosphate isomerase [Bacillus thuringiensis BMB171] Length = 287 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 9/276 (3%) Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISN 122 MTGG + IN LA A+ +AMAVGSQ D + S+++ R+ P+ + +N Sbjct: 1 MTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKVIRKVNPNGIFFAN 60 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG+ + +++A +AV ++ A+ L +HLN +QE+ P G+ +F + +I + Sbjct: 61 LGS-----EATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNS 115 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 VP+++KEVG G+S ++ + G+ DI G+GGT+++ +E+ R + F +WG Sbjct: 116 KVPIIVKEVGFGMSKETMQQLVNVGVTAIDIGGQGGTNFAAVENERR--QRMLSYFNNWG 173 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAV 301 I T S+ A N FIASGG++ +D+ K+I LGA+ A FL+ M D + + Sbjct: 174 IQTATSIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKL 233 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V IE L + M LG K ++EL +++ + Sbjct: 234 VDEIELLHTDLKFIMTALGAKTIEELQSVPLVVKGE 269 >gi|114566866|ref|YP_754020.1| isopentenyl pyrophosphate isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337801|gb|ABI68649.1| Isopentenyl-diphosphate delta-isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 310 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 11/301 (3%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 +S DE+D S+ FLGK+L +PL+I+++TGG + + INR LA A K ++ MAVGSQ + Sbjct: 1 MSLDEIDLSINFLGKELQYPLMINALTGGTAQALA-INRALARMALKYRLPMAVGSQSIA 59 Query: 99 FSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 A SF +R P+ ++++N+ A V++A +AV ++ AD L LH N +Q Sbjct: 60 LESPEAGPSFSIVRDINPNGIILANMNAATR-----VEEALEAVRMISADALQLHFNVVQ 114 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 E+ G+ +F + + + VP++ KEVG G S + ++GI FD G+G Sbjct: 115 ELAMTEGDRDFKGIVDNVRQIVHECPVPVIAKEVGFGFSREAAQCLWEAGIEIFDCGGQG 174 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT++ IE R + WGIPT +SL Q IASGG+R+ +D+ K++ Sbjct: 175 GTNFIVIEDQRGG--NFAGELDTWGIPTAISLMEILQL-PVKQVIASGGIRSALDVTKAL 231 Query: 278 ILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA L G+A+P LK + +A+ ++ + G + + E+ +I Sbjct: 232 TLGADLVGMAAPLLKAFISGGLEALDQSLSGFFYRLKSVFLMCGARNLPEIRRKPLIILG 291 Query: 337 Q 337 + Sbjct: 292 E 292 >gi|118586910|ref|ZP_01544343.1| alpha-hydroxy acid dehydrogenase [Oenococcus oeni ATCC BAA-1163] gi|118432637|gb|EAV39370.1| alpha-hydroxy acid dehydrogenase [Oenococcus oeni ATCC BAA-1163] Length = 368 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 35/356 (9%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++V HL LP ++ +VD SV+ G +P I +M Sbjct: 15 RKDEHLSLVIWQWRHKLPLSGLQFVHLDRPVLPNVNVTDVDHSVKLFGNHFQWPFYIEAM 74 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + IN+ LA A+K +AMAVGS+ + S+ IKSF + R+ P + +N+ Sbjct: 75 TGGSFR-TGVINQKLAAIAKKYHLAMAVGSESISISEKETIKSFSVVREENPDGFIFANI 133 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA V+ A +A+ ++ A+ L +HLN +QE+ G+ +FA I+ + +D Sbjct: 134 GA-----GHSVEDAKEAIRIVDANALEIHLNAVQELSMSEGDRSFASWKRNISNIIEQVD 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----------- 232 VP++LKEVG G+S + +IAG GGT + RIE R+ +S Sbjct: 189 VPVVLKEVGFGMSKKSVSDLASLHPAAINIAGAGGTDFGRIEETRNRQSFWETADQDEQN 248 Query: 233 ---------------DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 I + GI T SL A+ IA+GG+ N +++ S+ Sbjct: 249 EQEQEEEEFDDPEFQSILTSNTNLGIITSDSLRFAKQANTGLPIIANGGITNSLEVFNSL 308 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + G+A FL S + + IE+ +K+ + + G +E+ + Sbjct: 309 ALGAKMAGIAGYFLFQL--SQNKLEKTIENWQKQLPLLYAIYGVTNSEEISQLKEI 362 >gi|116491123|ref|YP_810667.1| isopentenyl pyrophosphate isomerase [Oenococcus oeni PSU-1] gi|290890631|ref|ZP_06553702.1| hypothetical protein AWRIB429_1092 [Oenococcus oeni AWRIB429] gi|116091848|gb|ABJ57002.1| Isopentenyl diphosphate isomerase [Oenococcus oeni PSU-1] gi|290479759|gb|EFD88412.1| hypothetical protein AWRIB429_1092 [Oenococcus oeni AWRIB429] Length = 367 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 34/355 (9%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++V HL LP ++ +VD SV+ G +P I +M Sbjct: 15 RKDEHLSLVIWQWRHKLPLSGLQFVHLDRPVLPNVNVTDVDHSVKLFGSHFQWPFYIEAM 74 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ + IN+ LA A+K +AMAVGS+ + S+ I+SF + R+ P + +N+ Sbjct: 75 TGGSFR-TGVINQKLAAIAKKYHLAMAVGSESISISEKETIESFSVVREENPDGFIFANI 133 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA V+ A +A+ ++ A+ L +HLN +QE+ G+ +FA I+ + +D Sbjct: 134 GA-----GHSVEDAKEAIRIVDANALEIHLNAVQELSMSEGDRSFASWKRNISNIIEQVD 188 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES----------- 232 VP++LKEVG G+S + +IAG GGT + RIE R+ +S Sbjct: 189 VPVVLKEVGFGMSKKSVSDLASLHPAAINIAGAGGTDFGRIEETRNRQSFWETADQDEQN 248 Query: 233 -------DIGIVFQ-------DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 FQ + GI T SL A+ IA+GG+ N +++ S+ Sbjct: 249 EQEQEEEFDDPEFQSILTSNTNLGIITSDSLRFAKQANTGLPIIANGGITNSLEVFNSLA 308 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + G+A FL S + + IES +K+ + + G + +E+ + Sbjct: 309 LGAKMAGIAGYFLFQL--SQNKLEKTIESWQKQLPLLYAIYGVTKSEEISQLKEI 361 >gi|227904091|ref|ZP_04021896.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus ATCC 4796] gi|227868110|gb|EEJ75531.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus ATCC 4796] Length = 343 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 178/338 (52%), Gaps = 17/338 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + + RK +H+ + FD HL+ ALPE D + + K +S P Sbjct: 7 IRSQRKEEHLKLAQMFFN-KEKYNSFDQLHLLRPALPETKVDINVLATKMFNKNVSAPFF 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG++K + IN+ L A + +A+A+GS ++ + + SF + R P+ +L Sbjct: 66 INAMTGGSDK-SKIINQALGRIANEENIALALGSTSILAKEKEQLDSFYIARIEDPNGIL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+N+ N + VQ VH L AD L +H+N +QEI P G+ NF + I + Sbjct: 125 IANV-----NPETPVQTVKDIVHELHADALQIHINTIQEIAMPEGDRNF-FWLNNIKEIR 178 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +D+P+++KEVG GL I + GI YFDIAG GGT++++IE+ R+ + Sbjct: 179 AEIDIPIIIKEVGFGLDQNTIHILKNEGISYFDIAGSGGTNFAQIENARNKYDV--SYLE 236 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 D G+PT +S MA+ + FI SGG+RN +D+LK + LG G+++ FL+ D Sbjct: 237 DIGLPTVISALMAQK--EQVDFIVSGGVRNPLDVLKGLTLGGQYVGISNVFLQKFNDQGY 294 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 D + I +++ + + G + L T +I++ Sbjct: 295 DGLQQLIAEWKEQLAALIAVYGKNDLVSL---TEIIKY 329 >gi|51892812|ref|YP_075503.1| isopentenyl pyrophosphate isomerase [Symbiobacterium thermophilum IAM 14863] gi|81610520|sp|Q67NT4|IDI2_SYMTH RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase gi|51856501|dbj|BAD40659.1| Isopentenyl-diphosphate delta-isomerase [Symbiobacterium thermophilum IAM 14863] Length = 363 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 107/345 (31%), Positives = 177/345 (51%), Gaps = 15/345 (4%) Query: 1 MVNDRKIDHINIVCK------DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK 54 + RK DH+ + P ++D HL++ +LPE++ E+D + G + Sbjct: 3 LRQQRKRDHVRLAAAWQERRPPPAAAGPGAGWEDVHLVNHSLPELALAEIDLTTSVAGVR 62 Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQY 113 L+ P++I++MTGG + + INR+LA A +AMAVGSQ D S+ + R+ Sbjct: 63 LAQPVVINAMTGGADDVTA-INRDLAAVAADLGLAMAVGSQTAGLRDPAVADSYRVVRRV 121 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 P ++++N+G+ D ++A AV ++ AD L +HLN QE+ P G+ +F Sbjct: 122 NPKGIVLANVGS-----DATPEQARAAVEMVEADLLQIHLNAPQELRMPEGDRDFRGRLE 176 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 IA + VP+++KE G G+S L ++G+R D++GRGGT+++ IE R SD Sbjct: 177 AIARMVEEAPVPVVVKECGFGVSRDVAVLLHQAGVRAVDVSGRGGTNFAWIEDRRAGLSD 236 Query: 234 IGIVFQDWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FL 291 Q+WGIPT +L E IASGG+R+G D K++ LGA +A P L Sbjct: 237 PDPGLQNWGIPTACALAEVAALGLPELDLIASGGIRHGSDAAKALALGARAAAVAGPVLL 296 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + V+A ++ + +M L G V + ++ Sbjct: 297 RQQREGARGVMAYLQQFLTDLRAAMLLAGAGSVAAMGQVPVVVTG 341 >gi|58337455|ref|YP_194040.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus NCFM] gi|58254772|gb|AAV43009.1| isopentenyl diphosphate isomerase [Lactobacillus acidophilus NCFM] Length = 339 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 178/338 (52%), Gaps = 17/338 (5%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + + RK +H+ + FD HL+ ALPE D + + K +S P Sbjct: 3 IRSQRKEEHLKLAQMFFN-KEKYNSFDQLHLLRPALPETKVDINVLATKMFNKNVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG++K + IN+ L A + +A+A+GS ++ + + SF + R P+ +L Sbjct: 62 INAMTGGSDK-SKIINQALGRIANEENIALALGSTSILAKEKEQLDSFYIARIEDPNGIL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I+N+ N + VQ VH L AD L +H+N +QEI P G+ NF + I + Sbjct: 121 IANV-----NPETPVQTVKDIVHELHADALQIHINTIQEIAMPEGDRNF-FWLNNIKEIR 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +D+P+++KEVG GL I + GI YFDIAG GGT++++IE+ R+ + Sbjct: 175 AEIDIPIIIKEVGFGLDQNTIHILKNEGISYFDIAGSGGTNFAQIENARNKYDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SS 298 D G+PT +S MA+ + FI SGG+RN +D+LK + LG G+++ FL+ D Sbjct: 233 DIGLPTVISALMAQK--EQVDFIVSGGVRNPLDVLKGLTLGGQYVGISNVFLQKFNDQGY 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 D + I +++ + + G + L T +I++ Sbjct: 291 DGLQQLIAEWKEQLAALIAVYGKNDLVSL---TEIIKY 325 >gi|227878670|ref|ZP_03996585.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus JV-V01] gi|227861734|gb|EEJ69338.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus JV-V01] Length = 342 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D E GK +S P Sbjct: 7 IRSERKEEHLKLAQMFFN-KEKYNSFDQLHLLRPALPETKVDPTILGSEMFGKNVSAPFF 65 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ ++IN+ L A++ +A+A+GS ++ + + + SF + R P VL Sbjct: 66 INAMTGGS-AASKQINQALGQVAQQQNIALALGSASILAKETDQLDSFMVARAEDPDGVL 124 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ +F I + Sbjct: 125 IVNV-----NPETPISAIKQIIQELNADALQIHLNTIQEIAMPEGDRDFR-WLDSIKAIR 178 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GL I L +GI YFD+AG GGT++++IE+ R+ + Sbjct: 179 TAIDLPIIIKEVGFGLDQTSIHLLKVNGIEYFDVAGSGGTNFAQIENARNASDV--SYLE 236 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 D G+PT ++ MA + + +F SGG+RN +DILK + LG G+++ FL+ + S Sbjct: 237 DLGLPTVVTALMA--WQEQVKFYVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGS 294 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I + + E + + G K + L Sbjct: 295 TGLEQLITNWKNELAALIAVYGKKDLASL 323 >gi|256843266|ref|ZP_05548754.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 125-2-CHN] gi|256850377|ref|ZP_05555805.1| isopentenyl pyrophosphate isomerase [Lactobacillus crispatus MV-1A-US] gi|262046475|ref|ZP_06019437.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus MV-3A-US] gi|293380930|ref|ZP_06626964.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 214-1] gi|312978157|ref|ZP_07789901.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus CTV-05] gi|256614686|gb|EEU19887.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 125-2-CHN] gi|256712774|gb|EEU27767.1| isopentenyl pyrophosphate isomerase [Lactobacillus crispatus MV-1A-US] gi|260573346|gb|EEX29904.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus MV-3A-US] gi|290922505|gb|EFD99473.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus 214-1] gi|310894875|gb|EFQ43945.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus crispatus CTV-05] Length = 338 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D E GK +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQLHLLRPALPETKVDPTILGSEMFGKNVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ ++IN+ L A++ +A+A+GS ++ + + + SF + R P VL Sbjct: 62 INAMTGGS-AASKQINQALGQVAQQQNIALALGSASILAKETDQLDSFMVARAEDPDGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ +F I + Sbjct: 121 IVNV-----NPETPISAIKQIIQELNADALQIHLNTIQEIAMPEGDRDFR-WLDSIKAIR 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GL I L +GI YFD+AG GGT++++IE+ R+ + Sbjct: 175 TAIDLPIIIKEVGFGLDQTSIHLLKVNGIEYFDVAGSGGTNFAQIENARNASDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 D G+PT ++ MA + + +F SGG+RN +DILK + LG G+++ FL+ + S Sbjct: 233 DLGLPTVVTALMA--WQEQVKFYVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGS 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I + + E + + G K + L Sbjct: 291 TGLEQLITNWKNELAALIAVYGKKDLASL 319 >gi|256851168|ref|ZP_05556557.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 27-2-CHN] gi|260660592|ref|ZP_05861507.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 115-3-CHN] gi|282934634|ref|ZP_06339877.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|297206033|ref|ZP_06923428.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus jensenii JV-V16] gi|256616230|gb|EEU21418.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 27-2-CHN] gi|260548314|gb|EEX24289.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 115-3-CHN] gi|281301209|gb|EFA93510.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|297149159|gb|EFH29457.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus jensenii JV-V16] Length = 340 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 15/329 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K I FD L+ ALPE + E LGKK+ P I+ Sbjct: 5 SKRKEEHLALAKKYFTIK--DNDFDRIELVRPALPESRVSSAAIACEILGKKVKAPFYIN 62 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS 121 +MTGG+ K E INR + A+ ++ A GS ++ + + + SF + R+ P + + Sbjct: 63 AMTGGSEKSKE-INRAIGKASRIGQIPFATGSSSILAKEKDQLASFYVAREENPDGLFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A V L AD L +H+N +QE+ P G+ +F K+ + Sbjct: 122 NV-----NPNTPANTAKNIVQELQADALQIHINTVQELAMPEGDRDFV-WIDKLKAIRDV 175 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +DVP+++KEVG G IEL K+ D+ G GGT++++IE+ R + Sbjct: 176 VDVPVIIKEVGFGFDKASIELLQKNNFNLIDLGGAGGTNFAQIENARSSHP--LPYLDEL 233 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDA 300 G+ T S +A F ASGG+RN +DILK ++LGA G+A+ FL+ + D Sbjct: 234 GLSTVKSALIAEE--CGIDFFASGGIRNALDILKCLVLGAKSVGIANLFLQAYENSGEDG 291 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +V + E L G V E Sbjct: 292 LVETVLRFEDELAGLFALFGINNVNEAKK 320 >gi|295693040|ref|YP_003601650.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus ST1] gi|295031146|emb|CBL50625.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus crispatus ST1] Length = 338 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D E GK +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQLHLLRPALPETKVDPTILGSEMFGKNVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ ++IN+ L A++ +A+A+GS ++ + + + SF + R P VL Sbjct: 62 INAMTGGS-AASKQINQALGQVAQQQNIALALGSASILAKETDQLDSFMVARAADPDGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ +F I + Sbjct: 121 IVNV-----NPETPISAIKQIIQELNADALQIHLNTIQEIAMPEGDRDFR-WLDSIKAIR 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A+D+P+++KEVG GL I L +GI YFD+AG GGT++++IE+ R+ + Sbjct: 175 TAIDLPIIIKEVGFGLDQTSIHLLKVNGIEYFDVAGSGGTNFAQIENARNASDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 D G+PT ++ MA + + +F SGG+RN +DILK + LG G+++ FL+ + S Sbjct: 233 DLGLPTVVTALMA--WQEQVKFFVSGGVRNPLDILKGLALGGKFVGISNVFLQEYIQNGS 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I + + E + + G K + L Sbjct: 291 TGLEQLITNWKNELAALIAVYGKKDLASL 319 >gi|325956904|ref|YP_004292316.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus 30SC] gi|325333469|gb|ADZ07377.1| isopentenyl pyrophosphate isomerase [Lactobacillus acidophilus 30SC] gi|327183683|gb|AEA32130.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1118] Length = 338 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + + FD HL+ ALPE D VE K++S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KQKYNSFDQLHLLRPALPETKVDTQILGVEMFKKRVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + +N+ L A K K+A+A+GS ++ + + + SF + R P VL Sbjct: 62 INAMTGGSQE-SKVVNKALGHVAAKEKIALALGSASILAKEEDQLDSFYVARNEDPDGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + V+ ++ +H L AD L +HLN +QEI P G+ NF I L Sbjct: 121 IINI-----NPETPVEATNKIIHELNADALQIHLNTVQEIAMPEGDRNF-FWLDHIKALR 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+P+++KEVG GL I +GI YFDIAG GGT++++IE+ R+ + Sbjct: 175 DQIDLPIIIKEVGFGLDEATIHTLKNAGIEYFDIAGSGGTNFAQIENARNSRDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSS 298 D G+ T +S MA+ + FI SGG+RN +D+LK ++LG G+++ FL+ + Sbjct: 233 DLGLSTVVSALMAKK--EDVNFIVSGGVRNPLDVLKGLVLGGQYVGISNVFLQEYNQNGV 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I + + E + + G + L Sbjct: 291 AGLEQFISAWKNELAALIAIYGQNSLASL 319 >gi|323466404|gb|ADX70091.1| Isopentenyl diphosphate isomerase [Lactobacillus helveticus H10] Length = 338 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 104/329 (31%), Positives = 176/329 (53%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D+ + E K +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + +N+ L A + K+A+A+GS ++ + + ++SF + R P+ VL Sbjct: 62 INAMTGGSKQSL-IVNQALGKIAHQEKIALALGSASILAKEKDQLESFYVARDEDPNGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ NF +I + Sbjct: 121 IVNV-----NPETPINAIKQTIKELQADALQIHLNTVQEIAMPEGDRNFI-WLDQIKNIL 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P+++KEVG GL I L ++GI+YFD+AG GGT++++IE+ R+ + Sbjct: 175 DQITIPVIIKEVGFGLDQNSIHLLKENGIKYFDVAGSGGTNFAQIENARNDHDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 D G+PT +S MA+ FI SGG+RN +DILK + LG G+++ FL+ +S Sbjct: 233 DIGLPTVISALMAQK--ESVNFIVSGGVRNPLDILKGLSLGGQFVGISNVFLQEFNKNSF 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I + + E + + G + L Sbjct: 291 EGLQTLISNWKDELAALISIYGKHDLASL 319 >gi|118467490|ref|YP_886682.1| isopentenyl pyrophosphate isomerase [Mycobacterium smegmatis str. MC2 155] gi|118468592|ref|YP_885453.1| isopentenyl pyrophosphate isomerase [Mycobacterium smegmatis str. MC2 155] gi|118168777|gb|ABK69673.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium smegmatis str. MC2 155] gi|118169879|gb|ABK70775.1| isopentenyl-diphosphate delta-isomerase, type 2 [Mycobacterium smegmatis str. MC2 155] Length = 341 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 100/282 (35%), Positives = 146/282 (51%), Gaps = 11/282 (3%) Query: 5 RKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS 63 RK HI++ + + + L + AL + + E+D + FLGK L P+LI + Sbjct: 12 RKRRHIDVCLNEAVDHQSVSTGLERYRLPYHALTQTNLTEIDLTTNFLGKPLRAPVLIGA 71 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI----KSFELRQYAPHTVL 119 MTGG + INRNLA AA+K V M +GSQR+M +SF +R AP +L Sbjct: 72 MTGGAE-LSGTINRNLAAAAQKLGVGMMLGSQRIMLRSGEQAAHRSESFAVRDVAPDVLL 130 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + N+G QL +D A+ +GAD L +H NPLQE IQ NG+T+FA ++ + Sbjct: 131 VGNIGLSQLTHD-NAPLITDALRRVGADALAVHTNPLQEAIQANGDTDFAGSRERLLEIG 189 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL----KSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 ++ PLLLKEVG G+ + + + D+AG GGTSWSR+E + Sbjct: 190 PSIGCPLLLKEVGHGIGAAAVAELTGGRDDVPVAAIDVAGAGGTSWSRVEQFVRYGTVRY 249 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 DWG+PT ++ R +ASGG+R G+D K + Sbjct: 250 PDLADWGVPTARAIIEVRQALPRIPLVASGGIRTGMDAAKGL 291 >gi|315038488|ref|YP_004032056.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1112] gi|312276621|gb|ADQ59261.1| isopentenyl pyrophosphate isomerase [Lactobacillus amylovorus GRL 1112] Length = 338 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + + FD HL+ ALPE D VE K++S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KQKYNSFDQLHLLRPALPETKVDTQILGVEMFKKRVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + +N+ L A K K+A+A+GS ++ + + + SF + R P VL Sbjct: 62 INAMTGGSQE-SKVVNKALGHVAAKEKIALALGSASILAKEEDQLDSFYVARNEDPDGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + V+ ++ +H L AD L +HLN +QEI P G+ NF I L Sbjct: 121 IINI-----NPETPVEATNKIIHELNADALQIHLNTVQEIAMPEGDRNF-FWLDHIKALR 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +D+P+++KEVG GL I +GI YFDIAG GGT++++IE+ R+ + Sbjct: 175 DQIDLPIIIKEVGFGLDEATIHTLKNAGIEYFDIAGSGGTNFAQIENARNSRDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSS 298 + G+ T +S MA+ + FI SGG+RN +D+LK ++LG G+++ FL+ + Sbjct: 233 NLGLSTVVSALMAKK--EDVNFIVSGGVRNPLDVLKGLVLGGQYVGISNVFLQEYNQNGV 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + I + + E + + G + L Sbjct: 291 AGLKQFISAWKNELAALIAIYGQNSLASL 319 >gi|238854638|ref|ZP_04644968.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 269-3] gi|260664419|ref|ZP_05865271.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii SJ-7A-US] gi|282932971|ref|ZP_06338368.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] gi|238832428|gb|EEQ24735.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 269-3] gi|260561484|gb|EEX27456.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii SJ-7A-US] gi|281303006|gb|EFA95211.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus jensenii 208-1] Length = 340 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 15/326 (4%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK +H+ + K I N FD L+ ALPE + E LGKK+ P I+ Sbjct: 5 SKRKEEHLALAKKYFAIKEND--FDRIELVRPALPESCVSPATIACEILGKKVKAPFYIN 62 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLIS 121 +MTGG+ K E INR + A+ ++ A GS ++ + + + SF R+ P + + Sbjct: 63 AMTGGSEKSKE-INRAIGKASRIGQIPFATGSSSILAKEKDQLASFYAAREENPDGLFFA 121 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 N+ N + A V L AD L +H+N +QE+ P G+ +F K+ + Sbjct: 122 NV-----NPNTPASIAKNIVKELNADALQIHINTVQELAMPEGDRDFV-WLDKLKAIRDE 175 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +D+P+++KEVG G I+L K+ D+ G GGT++++IE+ R + Sbjct: 176 VDIPVIIKEVGFGFDKSSIDLLQKNDFHLIDLGGAGGTNFAQIENGRSSHP--LPYLDEL 233 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-A 300 G+ T S +A+ + F ASGG+RN +DILK ++LGA G+A+ FL+ + + Sbjct: 234 GLSTVKSALIAQD--SGIDFFASGGIRNALDILKCLVLGAKSVGIANLFLQVYENGGEDG 291 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 +V + E L G +V E Sbjct: 292 LVETVLRFEDELAGLFALFGINKVNE 317 >gi|325125701|gb|ADY85031.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 341 Score = 280 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 168/337 (49%), Gaps = 16/337 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + FD HL+ ALPE + + GK+L+ P I++M Sbjct: 7 RKEEHLALTQMFFNAQK-TNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ K +INR L A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ Sbjct: 66 TGGSEK-SRQINRQLGEIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + + A + V L AD L +HLN QEI P G+ +F ++ + A Sbjct: 125 NPLT-----PAKAADKIVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAG 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GL + ++ +G +FDI G GGT++++IE+ R+ D G+ Sbjct: 179 VPVIVKEVGSGLDPVSLQKLQAAGFSWFDIGGAGGTNFAQIENSRNPHP--MAYLNDCGL 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 P +L Q I SGG+RN +D+ K + LG G+A+ FL + + D + Sbjct: 237 --PTALAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLD 294 Query: 303 AAIESLRKEFIVSMFLLG--TKRVQELYLNTALIRHQ 337 I ++E L G V++ Y +++Q Sbjct: 295 EEIGRWKEELAYLFALYGQSCLPVKQSYYLDLELKNQ 331 >gi|260101297|ref|ZP_05751534.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus helveticus DSM 20075] gi|260084882|gb|EEW69002.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus helveticus DSM 20075] Length = 338 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 175/329 (53%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D+ + E K +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQMHLLRPALPESMVDQSVLATEMFNKSVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVL 119 I++MTGG+ + + +N+ L A + K+A+A+GS ++ + + ++SF R P+ VL Sbjct: 62 INAMTGGSKQSL-IVNQALGKIAHQEKIALALGSASILAKEKDQLESFYAARDEDPNGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ NF +I + Sbjct: 121 IVNV-----NPETPINAIKQTIKELQADALQIHLNTVQEIAMPEGDRNFI-WLDQIKNIL 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P+++KEVG GL I L ++GI++FD+AG GGT++++IE+ R+ + Sbjct: 175 DQITIPVIIKEVGFGLDQNSIHLLKENGIKFFDVAGSGGTNFAQIENARNDHDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 D G+PT +S MA+ FI SGG+RN +DILK + LG G+++ FL+ +S Sbjct: 233 DIGLPTVISALMAQK--ESVNFIVSGGVRNPLDILKGLSLGGQFVGISNVFLQEFNKNSF 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I + + E + + G + L Sbjct: 291 EGLQTLISNWKDELAALIAIYGKHDLASL 319 >gi|237784667|ref|YP_002905372.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium kroppenstedtii DSM 44385] gi|237757579|gb|ACR16829.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium kroppenstedtii DSM 44385] Length = 428 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 97/414 (23%), Positives = 162/414 (39%), Gaps = 85/414 (20%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKK------------------------------FFDDWH 30 M RK DH+ + + + +DD Sbjct: 1 MSGSRKDDHLALAARQQREAHGEPPQPTDATTPAPDNASSAPSPRPAGSNSTYCAWDDVR 60 Query: 31 LIHRALPEISFDEVDPSVEF-----LG------------------KKLSFPLLISSMTGG 67 ++H +L I + D S G P I+ MTGG Sbjct: 61 ILHHSLAGIDPGQADISTTIPTDRSAGGNTNAVTNASTGAHTAQPLHWGLPFYINGMTGG 120 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAV 126 + + +NR LA A +T +A+A GS + + + + +F + R PH + +NL A Sbjct: 121 SE-LTAGVNRVLAETAARTGIAVATGSMSIYLREPDTLPTFRILRDRNPHGTVWANLSA- 178 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM---D 183 D A + V L AD L +H+N +QE + P G+ +A I + +A+ Sbjct: 179 ----DATPDDAARVVDALQADALQIHVNAVQETVMPEGSRGYASWPRNIEAIVNALEATH 234 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+++KEVG G++ ++ G+ D++GRGGT+++RIE+ R + D +G Sbjct: 235 TPVIVKEVGFGMTRNTLQQLHDLGVSIADVSGRGGTNFARIENDRRSDRDFS-YLTGFGQ 293 Query: 244 PTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS--- 298 SL A + ASGG+R D+L+ + LGA G+A FL A+ + Sbjct: 294 SAAFSLLDATTADPDTLPTLFASGGVRQPYDVLRGLALGADAMGVAGTFLHTALSTGVGD 353 Query: 299 ----------------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 DA+ + I + ++G +L+ ALI Sbjct: 354 ATRSPQERTQGIDAAVDALTSQINRWAEHLQALYEMVGATSTSDLHNTDALITG 407 >gi|161507629|ref|YP_001577583.1| isopentenyl pyrophosphate isomerase [Lactobacillus helveticus DPC 4571] gi|160348618|gb|ABX27292.1| Isopentenyl diphosphate isomerase [Lactobacillus helveticus DPC 4571] Length = 338 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 175/329 (53%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D+ + E K +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + +N+ L A + K+A+A+GS ++ + + ++SF + R P+ VL Sbjct: 62 INAMTGGSKQSL-IVNQALGKIAHQEKIALALGSASILAKEKDQLESFYVARDEDPNGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ NF +I + Sbjct: 121 IVNV-----NPETPINAIKQTIKELQADALQIHLNTVQEIAMPEGDRNFI-WLDQIKNIL 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P+++KEVG GL I L ++GI++FD+AG GG ++++IE+ R+ + Sbjct: 175 DQITIPVIIKEVGFGLDQNSIHLLKENGIKFFDVAGSGGINFAQIENARNDHDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 D G+PT +S MA+ FI SGG+RN +DILK + LG G+++ FL+ +S Sbjct: 233 DIGLPTVISALMAQK--ESVNFIVSGGVRNPLDILKGLSLGGQFVGISNVFLQEFNKNSF 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I + + E + + G + L Sbjct: 291 EGLQTLISNWKDELAALIAIYGKHDLASL 319 >gi|325686244|gb|EGD28287.1| isopentenyl-diphosphate delta-isomerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 341 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 169/337 (50%), Gaps = 16/337 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + FD HL+ ALPE + + GK+L+ P I++M Sbjct: 7 RKEEHLALTQMFFNAQK-TNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ K +INR L A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ Sbjct: 66 TGGSEK-SRQINRQLGEIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + + A + V L AD L +HLN QEI P G+ +F ++ + A Sbjct: 125 NPLT-----PAKAAAKIVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAG 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GL + ++ +G +FDI G GGT++++IE+ R+ + D G+ Sbjct: 179 VPVIVKEVGSGLDPVSLQKLQAAGFSWFDIGGAGGTNFAQIENSRNPHP--MVYLNDCGL 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 P +L Q I SGG+RN +D+ K + LG G+A+ FL + + D + Sbjct: 237 --PTALAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLD 294 Query: 303 AAIESLRKEFIVSMFLL--GTKRVQELYLNTALIRHQ 337 I ++E L G V++ Y +++Q Sbjct: 295 EEIGRWKEELTYLFALYGQGCLPVKQPYYLDLELKNQ 331 >gi|300812412|ref|ZP_07092842.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496579|gb|EFK31671.1| isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 341 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 168/337 (49%), Gaps = 16/337 (4%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+ + + FD HL+ ALPE + + GK+L+ P I++M Sbjct: 7 RKEEHLALTQMFFNAQK-TNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAM 65 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNL 123 TGG+ K +INR L A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ Sbjct: 66 TGGSEK-SRQINRQLGEIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANV 124 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + + A + V L AD L +HLN QEI P G+ +F ++ + A Sbjct: 125 NPLT-----PAKAAAKIVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAG 178 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 VP+++KEVG GL + ++ +G +FDI G GGT++++IE+ R+ D G+ Sbjct: 179 VPVIVKEVGSGLDPVSLQKLQAAGFSWFDIGGAGGTNFAQIENSRNPHP--MAYLNDCGL 236 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 P +L Q I SGG+RN +D+ K + LG G+A+ FL + + D + Sbjct: 237 --PTALAALLAAPLTKQLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLD 294 Query: 303 AAIESLRKEFIVSMFLL--GTKRVQELYLNTALIRHQ 337 I ++E L G V++ Y +++Q Sbjct: 295 EEIGRWKEELTYLFALYGQGCLPVKQPYYLDLELKNQ 331 >gi|66360273|pdb|1VCF|A Chain A, Crystal Structure Of Ipp Isomerase At I422 gi|66360274|pdb|1VCF|B Chain B, Crystal Structure Of Ipp Isomerase At I422 gi|66360277|pdb|1VCG|A Chain A, Crystal Structure Of Ipp Isomerase At P43212 gi|66360278|pdb|1VCG|B Chain B, Crystal Structure Of Ipp Isomerase At P43212 gi|66360279|pdb|1VCG|C Chain C, Crystal Structure Of Ipp Isomerase At P43212 gi|66360280|pdb|1VCG|D Chain D, Crystal Structure Of Ipp Isomerase At P43212 Length = 332 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 111/326 (34%), Positives = 168/326 (51%), Gaps = 5/326 (1%) Query: 2 VNDRKIDHINIVCK-DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + +RK H+ + + + + + L ++AL ++ EVD + FLGK L P L Sbjct: 3 IRERKRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFL 62 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I + TGG ERIN LA AAE V +GS R++ A++SF +R+ AP +LI Sbjct: 63 IGAXTGGEEN-GERINLALAEAAEALGVGXXLGSGRILLERPEALRSFRVRKVAPKALLI 121 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLG QL +G + V L AD L H+NPLQE +Q G+T+F L ++A L Sbjct: 122 ANLGLAQLRR-YGRDDLLRLVEXLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP 179 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + P+ +KEVG GLS + D+AG GGTSW+R+E + Sbjct: 180 -LPFPVXVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCE 238 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 GIPT ++ R +ASGG+ G D K++ LGA L +A P L+PA++ ++ Sbjct: 239 IGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAER 298 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQE 326 V A I +E ++F +G + +E Sbjct: 299 VAAWIGDYLEELRTALFAIGARNPKE 324 >gi|253574231|ref|ZP_04851573.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846708|gb|EES74714.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 239 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 134/225 (59%), Gaps = 2/225 (0%) Query: 2 VNDRKIDHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 ++RK +HI + ++ + F+ + H ALPE+ F E+ FLG L PLL Sbjct: 15 TSERKTEHIRLCLEEQVNAEGILNGFEKYRFRHNALPELDFAEISLKTAFLGASLRTPLL 74 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ISSMTGG+ ++ IN LA AAE+ AM VGS R +F +R++AP +I Sbjct: 75 ISSMTGGS-RLAGEINARLAEAAERRGWAMGVGSVRAAVERDELAHTFAVRRFAPTIPII 133 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +NLGAVQLNY +G + +AV + GAD L LHLN LQE+ QP G+TNF L +I + Sbjct: 134 ANLGAVQLNYGYGPEDCKRAVEIAGADMLVLHLNSLQEVFQPEGDTNFGGLLRRIEEVCR 193 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +P+ +KEVG G+ + ++G+ + D+AG GGTSWS++E Sbjct: 194 ELPIPVGVKEVGWGIDGATAKRLREAGVAFIDVAGAGGTSWSQVE 238 >gi|15212073|emb|CAC51373.1| putative carotenoid biosynthesis protein [Lactobacillus helveticus] Length = 338 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 174/329 (52%), Gaps = 14/329 (4%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + ++RK +H+ + FD HL+ ALPE D+ + E K +S P Sbjct: 3 IRSERKEEHLKLAQMFFN-KEKYNSFDQMHLLRPALPESKVDQSVLATEMFNKSVSAPFF 61 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + + +N+ L A + K+A+A+GS ++ + + ++SF + R + VL Sbjct: 62 INAMTGGSKQSL-IVNQALGKIAHQEKIALALGSASILAKEKDQLESFYVARDEDANGVL 120 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I N+ N + + Q + L AD L +HLN +QEI P G+ NF +I + Sbjct: 121 IVNV-----NPETPINAIKQTIKELQADALQIHLNTVQEIAMPEGDRNFI-WLDQIKNIL 174 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P+++KEVG GL I L ++GI++FD+AG GG ++++IE+ R+ + Sbjct: 175 DQITIPVIIKEVGFGLDQNSIHLLKENGIKFFDVAGSGGINFAQIENARNDHDV--SYLE 232 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 D G+PT +S MA+ FI SGG+RN +DILK + LG G+++ FL+ +S Sbjct: 233 DIGLPTVISALMAQK--ESVNFIVSGGVRNPLDILKGLSLGGQFVGISNVFLQEFNKNSF 290 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + I + + E + + G + L Sbjct: 291 EGLQTLISNWKDELAALIAIYGKHDLASL 319 >gi|104773996|ref|YP_618976.1| isopentenyl pyrophosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423077|emb|CAI97798.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 325 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 162/321 (50%), Gaps = 15/321 (4%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 + FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L Sbjct: 6 QKTNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEK-SRQINRQLG 64 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + Sbjct: 65 EIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAADK 119 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 V L AD L +HLN QEI P G+ +F ++ + A VP+++KEVG GL + Sbjct: 120 IVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAGVPVIVKEVGSGLDPVS 178 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ +G +FDI G GGT++++IE+ R+ D G+ P +L Sbjct: 179 LQKLQAAGFSWFDIGGAGGTNFAQIENSRNPHP--MAYLNDCGL--PTALAALLAAPLTK 234 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFL 318 Q I SGG+RN +D+ K + LG G+A+ FL + + D + I ++E L Sbjct: 235 QLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLDEEIGRWKEELAYLFAL 294 Query: 319 LG--TKRVQELYLNTALIRHQ 337 G V++ Y +++Q Sbjct: 295 YGQSCLPVKQSYYLDLELKNQ 315 >gi|116514012|ref|YP_812918.1| isopentenyl pyrophosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093327|gb|ABJ58480.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 325 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 162/321 (50%), Gaps = 15/321 (4%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 + FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L Sbjct: 6 QKTNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEK-SRQINRQLG 64 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + Sbjct: 65 EIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAADK 119 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 V L AD L +HLN QEI P G+ +F ++ + A VP+++KEVG GL + Sbjct: 120 IVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAGVPVIVKEVGSGLDPVS 178 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ +G +FDI G GGT++++IE+ R+ D G+ P +L Sbjct: 179 LQKLQAAGFSWFDIGGAGGTNFAQIENSRNPHP--MAYLNDCGL--PTALAALLAAPLTK 234 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFL 318 Q I SGG+RN +D+ K + LG G+A+ FL + + D + I ++E L Sbjct: 235 QLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGPDGLDEEIGRWKEELAYLFAL 294 Query: 319 L--GTKRVQELYLNTALIRHQ 337 G V++ Y +++Q Sbjct: 295 YGQGCLPVKQSYYLDLELKNQ 315 >gi|313123652|ref|YP_004033911.1| isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280215|gb|ADQ60934.1| Isopentenyl diphosphate isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 325 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 163/321 (50%), Gaps = 15/321 (4%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 + FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L Sbjct: 6 QKTNSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEK-SRQINRQLG 64 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A K ++A+A+GS ++ + + ++SF + R+ P +L +N+ + + A + Sbjct: 65 EIANKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAKAAAK 119 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 V L AD L +HLN QEI P G+ +F ++ + A VP+++KEVG GL + Sbjct: 120 IVKDLQADALQIHLNVAQEIPMPEGDRDFV-WLDRMLEIKEAAGVPVIVKEVGSGLDPVS 178 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ +G +FDI G GGT++S+IE+ R+ D G+ P +L Sbjct: 179 LQKLQAAGFSWFDIGGAGGTNFSQIENSRNPHP--MAYLNDCGL--PTALAALLAAPLTK 234 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFL 318 Q I SGG+RN +D+ K + LG G+A+ FL + + D + I S ++E L Sbjct: 235 QLIVSGGVRNPLDVFKGLALGGKFVGVANHFLHTLLNEGLDGLDEEIGSWKEELTYLFAL 294 Query: 319 L--GTKRVQELYLNTALIRHQ 337 G V++ Y +++Q Sbjct: 295 YGQGCLPVKQPYYLDMELKNQ 315 >gi|332686199|ref|YP_004455973.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Melissococcus plutonius ATCC 35311] gi|332370208|dbj|BAK21164.1| isopentenyl-diphosphate delta-isomerase, FMN-dependent [Melissococcus plutonius ATCC 35311] Length = 268 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 138/247 (55%), Gaps = 8/247 (3%) Query: 89 AMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 +A GS I ++++ R+ P ++ +NLGA +++A +A+ ++ AD Sbjct: 1 MVATGSVNAALKGPKLIDTYQIIRKENPKGIIFTNLGA-----GCSLEQAKRAIDLIQAD 55 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 GL +H+N QE++ P G+ +F + I LL+ + +PL++KEVG G+S ++ K G Sbjct: 56 GLQIHVNLAQELVMPEGDRDFRNWLDSIQLLTEQLAIPLIVKEVGFGMSQETLKKLQKIG 115 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ DI+G+GGT++ +IE+ R + ++ DWG T +SL + +E +ASGG+ Sbjct: 116 VKAVDISGQGGTNFIQIENARREKKELAF-LNDWGQSTIISLLESTNLHDEMTVLASGGI 174 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R+ +DI+K++ LGAS G+A L + D D + ++ ++E + LLG KR + Sbjct: 175 RHSLDIVKALSLGASSVGIAGTILDSLINDGLDLTIQLVQKWQEELKILYTLLGKKRTAD 234 Query: 327 LYLNTAL 333 L + Sbjct: 235 LNTTDIV 241 >gi|257878882|ref|ZP_05658535.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium 1,230,933] gi|257813110|gb|EEV41868.1| isopentenyl pyrophosphate isomerase [Enterococcus faecium 1,230,933] Length = 272 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 8/251 (3%) Query: 88 VAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + +A GS + ++ + RQ PH +I+N+GA V++A +A+ + A Sbjct: 1 MMIATGSVSAALKVPSLADTYTIMRQEYPHGKIIANIGA-----GTSVERAKEAIRLFHA 55 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 D L +HLN QE++ P G+ +F + I +A+DVPL++KEVG G++ + Sbjct: 56 DALQIHLNAPQELVMPEGDRDFTNWKVLIQETQTAIDVPLIVKEVGFGMTRETLNDLAAL 115 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ DI+GR GTS+++IE+ R + ++ DWG T SL A + +ASGG Sbjct: 116 GVHTVDISGRSGTSFTQIENARRSKRELS-YLADWGQSTVSSLLEANEADTSMEILASGG 174 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +RN DI K++ LGA+ G + L M + + ++ ++E + ++G Sbjct: 175 IRNAYDIFKALCLGANAVGTSGTVLTHLMNHGVEETIILMKQWQEELRLLYTMVGATNTA 234 Query: 326 ELYLNTALIRH 336 L+ + + Sbjct: 235 ALHQQSLIFSG 245 >gi|1146216|gb|AAC83963.1| similar to Erwinia herbicola carotenoid biosynthesis cluster; putative [Bacillus subtilis subsp. subtilis str. 168] Length = 212 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++GA+ L +HLN +QEI+ P G+ +F+ +I + S + VP+++KEVG G+S Sbjct: 1 MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGK 60 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G DI G GGT++S+IE+ R F WGI T SL R + I Sbjct: 61 LYEAGAAAVDIGGYGGTNFSKIENLRRQRQ--ISFFNSWGISTAASLAEIRSEFPASTMI 118 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 ASGGL++ +D+ K+I LGAS G+A FLK D + ++ I+ + +E + M +LG Sbjct: 119 ASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGA 178 Query: 322 KRVQELYLNTALIRHQ 337 + + +L +I+ + Sbjct: 179 RTIADLQKAPLVIKGE 194 >gi|42516881|emb|CAD92063.1| isopentenyl diphosphate isomerase type 2 [Halobacterium salinarum] Length = 225 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 132/229 (57%), Gaps = 13/229 (5%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I SMTGG++ E INR LA AA +T +AM +GSQR D ++S+ + R AP Sbjct: 1 IDSMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I Sbjct: 60 FIYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------E 231 +S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 119 VSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQ 178 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 IG +F++WGIPT S IASGG+R G+D+ K+I LG Sbjct: 179 KQIGTLFREWGIPTAASTIEC--VAEHDCVIASGGVRTGLDVAKAIALG 225 >gi|42516877|emb|CAD92061.1| isopentenyl diphosphate isomerase type 2 [Halobacterium salinarum] Length = 223 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 130/227 (57%), Gaps = 13/227 (5%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I SMTGG++ E INR LA AA +T +AM +GSQR D ++S+ + R AP Sbjct: 1 IDSMTGGHHNTTE-INRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + NLGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I Sbjct: 60 FIYGNLGAAQLR-EYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------E 231 +S A+ VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + Sbjct: 119 VSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQ 178 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 IG +F++WGIPT S IASGG+R G+D+ K+I Sbjct: 179 KQIGTLFREWGIPTAASTIEC--VAEHDCVIASGGVRTGLDVAKAIA 223 >gi|42516887|emb|CAD92066.1| isopentenyl diphosphate isomerase type 2 [Halorubrum distributum] Length = 220 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTVLISN 122 GG+ E INR LA AA +T +AM +GSQR D ++S+ + R AP + N Sbjct: 1 GGHQNTTE-INRALARAASETGIAMGLGSQRAGLELDDDRVLESYTVVRDAAPDAFIYGN 59 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LGA QL ++ ++ QAV ++ AD L +HLN LQE QP G+ + + + I +S ++ Sbjct: 60 LGAAQLR-EYDIEMVEQAVKMIDADALAVHLNFLQEATQPEGDVDGRNCVAAIERVSESL 118 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL------ESDIGI 236 VP+++KE G G+S +G+ D+AG+GGT+WS IE++R + IG Sbjct: 119 SVPIIVKETGNGISRETARELTAAGVDALDVAGKGGTTWSGIEAYRAAAANAPRQKRIGT 178 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 +F++WGIPT +S + IASGG+R G+D+ K+I LG Sbjct: 179 LFREWGIPTAVSTIECAAEHD--CVIASGGVRTGLDVAKAIALG 220 >gi|148988143|ref|ZP_01819606.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP6-BS73] gi|147926607|gb|EDK77680.1| isopentenyl pyrophosphate isomerase [Streptococcus pneumoniae SP6-BS73] Length = 259 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 12/198 (6%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 M +RK +HI + + FD+ LIH +LP + DE+D S EF G+K FP Sbjct: 1 MTTNRKDEHILYALEQ---KSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFY 57 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 I++MTGG+NK E IN+ LA AE + GS + SF ++ P+ +L Sbjct: 58 INAMTGGSNKGRE-INQKLAQVAESCGILFVTGSYSAALKNP-TDDSFSVKFSHPNLLLG 115 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +N+G D V+ Q V + L +H+N +QE++ P G F S +A S Sbjct: 116 TNIG-----LDKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSK 170 Query: 181 AMDVPLLLKEVGCGLSSM 198 + P+LL L M Sbjct: 171 QI--PVLLSSRKWALEWM 186 >gi|313619035|gb|EFR90855.1| isopentenyl-diphosphate delta-isomerase [Listeria innocua FSL S4-378] Length = 210 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 112/209 (53%), Gaps = 8/209 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K + +D LI ++P + ++D + FLG + FP Sbjct: 8 LRERRKDEHVALGVKQ-NENLAPSSLEDIQLIGTSIPRYNVKDIDLTTTFLGATVPFPFY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVL 119 I++MTGG+ + +RIN LA A + + MAVGSQ + + I ++++ R+ P ++ Sbjct: 67 INAMTGGS-RHTKRINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYQVVREVNPKGII 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q +A+ +L AD L +H+NP QE++ G+ +F+ S+I Sbjct: 126 LANVS-----PEVDIQDGIRAIEMLEADALQIHINPAQELVMQEGDRSFSHWLSRIEAYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 VP+++KEVG G++ ++ + G+ Sbjct: 181 KNSPVPVVVKEVGFGMTRETVKTLAEIGV 209 >gi|47094522|ref|ZP_00232190.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 4b H7858] gi|47017105|gb|EAL07970.1| isopentenyl-diphosphate delta-isomerase [Listeria monocytogenes str. 4b H7858] Length = 210 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 1 MVNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK +H+ + K +D LI ++P + ++D + +G + FPL Sbjct: 8 LRERRKDEHVALGVKQNEQLAPSS-LEDIQLIGTSIPRYNVKDIDLTTTIVGTNVPFPLY 66 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVL 119 I++MTGG+ + ++IN LA A + + MAVGSQ + + I +++ +R+ P+ ++ Sbjct: 67 INAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+ + +Q+ +A+ +L A+ L +H+NP QE++ G+ +F+ ++I Sbjct: 126 LANIS-----PEVALQEGLRAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYV 180 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 VP+++KEVG G++ ++ G++ Sbjct: 181 KLSPVPVVVKEVGFGMTRETVKTLADIGVQ 210 >gi|126362789|gb|ABO10429.1| isopentenyl diphosphate isomerase [Brevundimonas bacteroides] Length = 198 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++GAD L +HLNPLQE QP G+ ++ +++ + L +++ P+++KE G G+S+ Sbjct: 2 EMIGADALIVHLNPLQEACQPEGDRDWWGVAAALEALIRSLNAPVVVKETGAGISAPTAR 61 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRD---LESDIGIVFQDWGIPTPLSLEMARPYCNE 258 + G D+AG GG +W IE R + + F DWGIPT ++ R C E Sbjct: 62 RLIGMGAAVIDVAGAGGANWGLIEGQRATSPADKAHALAFADWGIPTARAIADVRAACPE 121 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 A I SGG+R+GVD K+I LGA + G A+ L+ A SSDAVV + ++ + F Sbjct: 122 ATLIGSGGIRDGVDAAKAIRLGADIVGQAAGVLEAATRSSDAVVEHFDLAIRQLRTTCFC 181 Query: 319 LGTKRVQELYLN 330 G+ +Q+L Sbjct: 182 TGSANLQDLRHA 193 >gi|218463049|ref|ZP_03503140.1| isopentenyl pyrophosphate isomerase [Rhizobium etli Kim 5] Length = 203 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 117/195 (60%), Gaps = 3/195 (1%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L ADGL +HLNPLQE +QP+G+ ++ + +++ + ++ VP++ KEVG GLS+ Sbjct: 1 DALEADGLIVHLNPLQEALQPDGDRDWHGVLAQVTRAARSVGVPIVAKEVGSGLSASVAC 60 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLE---SDIGIVFQDWGIPTPLSLEMARPYCNE 258 +++G+ D+AG GGTSW+ +E R + + + F DWGIPTP SL+ R Sbjct: 61 ALVEAGVAVIDVAGAGGTSWAAVEGERARDAAGRAVAMAFADWGIPTPASLQAVRRALPT 120 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + IASGG+R+GVD+ K+I LGA + G A+ L A S++AVVA E + ++ V+ F Sbjct: 121 VKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAATVSTEAVVAHFEVVIRQLAVACFC 180 Query: 319 LGTKRVQELYLNTAL 333 G+ + L L Sbjct: 181 TGSPDLATLRQARLL 195 >gi|332666117|ref|YP_004448905.1| Isopentenyl-diphosphate delta-isomerase [Haliscomenobacter hydrossis DSM 1100] gi|332334931|gb|AEE52032.1| Isopentenyl-diphosphate Delta-isomerase [Haliscomenobacter hydrossis DSM 1100] Length = 349 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 40/338 (11%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVE----------FLG 52 +RK DHI + + + L S FLG Sbjct: 20 EERKRDHIQLAFNAQVLQAELDA----RFYYEPL---------LSGHPVAGSWPCFPFLG 66 Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 PL +SSMTGG M IN NLA A + + M +GS R + + F ++ Sbjct: 67 HTFRAPLWVSSMTGGT-AMARTINHNLARACGEFGMGMGLGSCRALLYSDEVLADFAVKP 125 Query: 113 YAPHTVLISNLGAVQLNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 L +NLG QL + + + + L ADGL +H+NPLQE +QP G+ Sbjct: 126 LMGKQPLFANLGIAQLEQLIARRELYRINMMLEKLEADGLIIHVNPLQEWLQPEGDRFVH 185 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + + +DVPL++KEVG G+ + L+ + D A GGT+++++E RD Sbjct: 186 PPLQTIETILAQVDVPLIVKEVGQGMGKESLRALLQLPLAAIDFAAGGGTNFAKLELLRD 245 Query: 230 LESDIGIV--FQDWGIPTPLSLEMARPYCNEA-------QFIASGGLRNGVD---ILKSI 277 E+ I G + E IASGG++N +D ++ + Sbjct: 246 SEAKQLIYGHLTQVGHSAVEMVGFVNQLLLELGDKVRCPAVIASGGVQNFLDGYYLVHKL 305 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 L A + G AS FLK A +++ + + + ++ Sbjct: 306 QLPA-VYGQASGFLKHAQGDYESLRTYVAAQIEGLELA 342 >gi|327405193|ref|YP_004346031.1| Isopentenyl-diphosphate Delta-isomerase [Fluviicola taffensis DSM 16823] gi|327320701|gb|AEA45193.1| Isopentenyl-diphosphate Delta-isomerase [Fluviicola taffensis DSM 16823] Length = 339 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 21/325 (6%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 RK +H+++ D + + E ++ D S++ K + +P+ ISSM Sbjct: 15 RKQNHLDLAFASQ------SALSDGRFYYEPMLEGHPEQSDMSIQLGEKTMRYPIWISSM 68 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT-VLISNL 123 TGG + +N+ LA A K M +GS RV+ D+ F LR L +N+ Sbjct: 69 TGGTS-AAGPLNKMLAKTANKYGFGMGLGSCRVILEDNTYFDDFNLRPILGDASPLFANV 127 Query: 124 GAVQLNYDFG---VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 G Q+ K V L ADGL +H+NPLQE +QP G+ I L + Sbjct: 128 GIAQIERLIDKGQTSKLKALVDKLDADGLIVHVNPLQEWLQPEGDLIQRSPLVTIKQLLN 187 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD------LESDI 234 +D +++KEVG G + LK I D A GGT++S++E R+ E I Sbjct: 188 EIDTNIIVKEVGQGFGPESMRELLKLPILAIDFAANGGTNFSKLELLRNEPLKAHYEDVI 247 Query: 235 GIVFQDWGIPTPL--SLEMARPYCNEAQFIASGGLRNGVD--ILKSIILGASLGGLASPF 290 + + + L S++ I SGG++N +D L S ++ G A+PF Sbjct: 248 ALGHSAYEMVDFLNKSIQELGSERKCNNVIISGGIKNFLDGYYLTSKANIPAIYGQAAPF 307 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVS 315 LK A +S +A+ E K +++ Sbjct: 308 LKHANESQEALDTFAEIQIKGLLMA 332 >gi|52548678|gb|AAU82527.1| isopentenyl-diphosphate delta-isomerase [uncultured archaeon GZfos18C8] Length = 226 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 100/188 (53%), Gaps = 5/188 (2%) Query: 1 MVND-RKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 M RKI+H+ I DP FDD HLIH ALPEI DE+D S E GK ++ PL Sbjct: 1 MTTSLRKIEHLQICANDPVEAHVSAGFDDVHLIHCALPEIDKDEIDTSTELFGKVMAAPL 60 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTV 118 LI+SMTGG+ IN+ LA+AAE + + VGSQR + ++F +R APH Sbjct: 61 LIASMTGGHPDTY-PINKALALAAEHLGIGIGVGSQRAALENPEQEETFRVVRDCAPHAF 119 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSKIAL 177 + +N+G VQL ++G+ A+ ++ + + LQE IQP G T I Sbjct: 120 VYANIGVVQLT-EYGIDGVEHAIEMIEXXXISRXIIXFLQEAIQPEGCTQARGSLDAIKD 178 Query: 178 LSSAMDVP 185 + A+ VP Sbjct: 179 VCDAVSVP 186 >gi|254580905|ref|XP_002496438.1| ZYRO0C18524p [Zygosaccharomyces rouxii] gi|238939329|emb|CAR27505.1| ZYRO0C18524p [Zygosaccharomyces rouxii] Length = 554 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 131/340 (38%), Gaps = 46/340 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + R L +I EVD S LG K+ P IS G +K+ Sbjct: 205 DEFTLRENHYAYSRIFFKPRILQDIDPSEVDCSTTLLGAKVDAPFYISGFAG--SKLAHP 262 Query: 75 I-NRNLAIAAEKTKVAMAVGSQ--------------------RVMFSDHNAIKSFE--LR 111 + RNL IAA V V Q + FS + +F+ +R Sbjct: 263 LGERNLQIAAYNANVMEMVPKQNSYGPEEFYSTVPDDQSQWMQYHFSTPEEVLNFDKVVR 322 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + V L D G ++ V+ AD +++ L I+ + Sbjct: 323 EAESRPSVKGIFFNVDLA-DIGNREKDSRRRVMDAD----NISDLNAIVNNRMGNHPKFS 377 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + S+ ++P+ LK V G D+ + K G++ ++ GG ++ Sbjct: 378 WKDVEKIVSSTNLPIALKGVQRG---EDVVMAAKKGVKAVVLSNHGGRQLDFSRPPLEVL 434 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + + + + + GG+R G DI+K++ LGA GL PFL Sbjct: 435 AEANEMLKK------------QNMQGDIEIYLDGGVRRGSDIVKALCLGAKGVGLGRPFL 482 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A + V I L++E +M LLG +++EL + Sbjct: 483 YAMAGYGEEGVDHLITILKEEIKNNMRLLGVTKIEELNES 522 >gi|269928885|ref|YP_003321206.1| Isopentenyl-diphosphate Delta-isomerase [Sphaerobacter thermophilus DSM 20745] gi|269788242|gb|ACZ40384.1| Isopentenyl-diphosphate Delta-isomerase [Sphaerobacter thermophilus DSM 20745] Length = 369 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 26/320 (8%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 L+ LPEI+ VD SV FLG+++S P+L+ + ++ E + LA A+ ++ + Sbjct: 45 LLPNPLPEIALANVDTSVRFLGREISLPVLLLA-----SQPSEEL-GKLAALAQSRRLPL 98 Query: 91 AVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYD-----FGVQKAHQAVHVL 144 ++G + +D S + LR AP +L+ + A L + + +A H Sbjct: 99 SIGDVSALATDPALPASLQGLRLRAPDAILLGEIPATALVPQPDQAAHDLDRLAEAPHQA 158 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK-------EVGCGLSS 197 G GL + L+ Q ++ N + IA L + +P+L++ GL Sbjct: 159 GLSGLIVRLDFDQAVLAGNSTPDATGALDAIAALIRRLRLPVLVRCASGLARHTARGLVE 218 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + L +G A GGT R + VF WGIPT ++ M R Sbjct: 219 RGVAGLLVAGTGPIPTAAGGGTPAPEQPQPRS----LATVFAGWGIPTVAAIRMLRSV-- 272 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 A I+ G + G+D K+I LGA L L +P + ++ DA+ A +++ E +MF Sbjct: 273 GAPVISDGAVETGLDAAKAIALGADLIAL-TPPVDSSLSGEDALAAWLDTFTAEIRAAMF 331 Query: 318 LLGTKRVQELYLNTALIRHQ 337 L G R+ L + + Sbjct: 332 LAGALRIGGLRQIPFVATGE 351 >gi|218515082|ref|ZP_03511922.1| isopentenyl pyrophosphate isomerase [Rhizobium etli 8C-3] Length = 218 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 3/181 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+++V ++ H ALPE+ +++ LGK + PLL Sbjct: 39 LTRRKDDHLDLVLDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAPLL 98 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVL 119 ISSMTGG + + INR+L+ AA+ +AM VGSQRV N+ + LR+ AP L Sbjct: 99 ISSMTGGMPRA-KAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDIPL 157 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 ++N+GA QL G+ A +AV L ADGL +HLNPLQE++QP+G+ ++ + +++A + Sbjct: 158 LANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVARAA 217 Query: 180 S 180 Sbjct: 218 R 218 >gi|301166757|emb|CBW26334.1| putative isopentenyl-diphosphate delta-isomerase [Bacteriovorax marinus SJ] Length = 337 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 144/329 (43%), Gaps = 22/329 (6%) Query: 2 VNDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI 61 ++DRK HI + + D+ + + P +D S FLGK L PL I Sbjct: 9 LSDRKYAHIQLADDAQLEAGHINKLFDYEPLFSSHPST----IDLSTSFLGKTLGAPLWI 64 Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-HTVLI 120 SSMTGG + IN+NLA A + + MA+GS R + N + F LR Sbjct: 65 SSMTGGTGEA-RIINQNLATVAAEFGLGMALGSCRPILKSDNDFEDFNLRPILGAELPFW 123 Query: 121 SNLGAVQLNYDFGVQK---AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 +NLG Q+ + + + L ADGL +H+NPLQE QP G+ I Sbjct: 124 ANLGIAQIEELIENNELESIKEMLSKLSADGLIIHINPLQEWYQPEGDAFARAPIETIKD 183 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES--DIG 235 + +A +P+++KEVG G+ ++ L+ I+ ++A GGT++S++E R+ E+ Sbjct: 184 VIAA-QIPVMVKEVGQGMGPRSLKALLELPIKGLELAAFGGTNFSKLEKLRENEALSHKH 242 Query: 236 IVFQDWGIPTPLSLEMARPYCNEA-------QFIASGGLRNGV--DILKSIILGASLGGL 286 G ++ NE I SGG+ + + L ++ G Sbjct: 243 SELMFVGHTALEMIDQINLLRNELGDKCLCKDIIISGGISDTLYGHWLSERCTLNNVVGR 302 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 A +L A D + + A + + ++ Sbjct: 303 AKSYLDHATD-IEELRAYVRGQIETLKMA 330 >gi|255950126|ref|XP_002565830.1| Pc22g19270 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592847|emb|CAP99215.1| Pc22g19270 [Penicillium chrysogenum Wisconsin 54-1255] Length = 366 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 131/350 (37%), Gaps = 67/350 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+ +D + + R L I+ D++D S EFLG K+S P S + + Sbjct: 38 AMDLITLNENETAYDRYKIRPRVL--INVDKIDTSAEFLGSKVSLPFGFSPAA---SMKL 92 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA AA K +AM + S ++ + P+ + + L + Sbjct: 93 AHPDGELATSRAAAKFGLAMGLSSYS----NYPLEEVAAQGTGNPYVMQMCVLRDRSITL 148 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFAD---- 170 +++A +A G LFL ++ ++ PN ++ AD Sbjct: 149 QL-LERAEKA----GYKALFLSVDVPVLGKRINEYRNEYTIPDDMSWPNILSHGADHSDR 203 Query: 171 --------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 I L + + LK V + DIEL +K GI I+ GG Sbjct: 204 TDYDPSLDWEETIPWLRQHTSLKIWLKGVT---TPEDIELAIKYGIDGIVISNHGGRQLD 260 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGA 281 + T +L + P GG+R G DI K++ LGA Sbjct: 261 GMP------------------STLDALRVCAPVAKGRIPIAVDGGIRRGSDIFKALALGA 302 Query: 282 SLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 S + PF A + + V AI+ LR+E ++M L G + + E+ Sbjct: 303 SFCFIGRIPFWGLAYNGQEGVELAIKILRQELRITMALAGCRTISEIQSC 352 >gi|71397772|ref|XP_802537.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70863746|gb|EAN81091.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 179 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 100/169 (59%), Gaps = 3/169 (1%) Query: 1 MVNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 +V RK DHI+I ++ + + + ALPEIS ++D EF+G LSFP Sbjct: 12 IVRRRKKDHIDICLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 L+ISSMTGG + IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 72 LIISSMTGG-EEHGRIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSVP 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE QP G+TN Sbjct: 131 MFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEACQPEGDTN 179 >gi|309807530|ref|ZP_07701486.1| putative isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 01V1-a] gi|308169231|gb|EFO71293.1| putative isopentenyl-diphosphate delta-isomerase, type 2 [Lactobacillus iners LactinV 01V1-a] Length = 207 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 4/201 (1%) Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 Q V L AD L +HLN +QE G+ +F I + ++VPL++KEVG GL Sbjct: 1 QIVKELQADALQIHLNAVQEAAMTEGDRDFH-WLDNILEIQQLVNVPLIIKEVGMGLDPF 59 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 ++ K GI YFD+ G GGT++ IE+ R D + D G+ T SL + Sbjct: 60 SVKKLAKLGINYFDVGGMGGTNFVHIENQRTANKD-NLFLDDLGLSTVKSLLSNLQEISH 118 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS--SDAVVAAIESLRKEFIVSM 316 FIASGG+ + ++I KS++LGA G+A+ FL +M A+++ I+ L+ + I+ M Sbjct: 119 VNFIASGGINSSINIFKSLVLGAKYVGIANHFLHLSMQDKNGTALISEIQKLKYQLIILM 178 Query: 317 FLLGTKRVQELYLNTALIRHQ 337 L G ++ ++ + + Sbjct: 179 ALFGINKLDDVKKVKYYLSLE 199 >gi|168179615|ref|ZP_02614279.1| dehydrogenase, FMN-dependent [Clostridium botulinum NCTC 2916] gi|226950550|ref|YP_002805641.1| dehydrogenase [Clostridium botulinum A2 str. Kyoto] gi|182669613|gb|EDT81589.1| dehydrogenase, FMN-dependent [Clostridium botulinum NCTC 2916] gi|226843133|gb|ACO85799.1| dehydrogenase, FMN-dependent [Clostridium botulinum A2 str. Kyoto] Length = 337 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 123/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE G+K+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIH--DAKNPDISVELFGRKMDMPIFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G R A+ SF EL+++ ++I + Sbjct: 101 --EEEYISWVIGGCRDSGIYPMVGDTAVDSFLITNLDELKKFNGEGIVIIKPWENDNVIS 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+K + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVKASFGGEREGVKI 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|50304481|ref|XP_452190.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641322|emb|CAH02583.1| KLLA0B14795p [Kluyveromyces lactis] Length = 556 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 126/341 (36%), Gaps = 57/341 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + + L +I +EVD S +FLG K+ P+ I++ G +++ Sbjct: 210 DEYTLRENHYAYSRVFFRPKILQDI--EEVDTSTKFLGAKVDLPIYITAFAG--SRLAHP 265 Query: 75 INR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL-----GAVQL 128 + NL AA V V Q S+ ++ PH N Q Sbjct: 266 MGELNLQSAAYDANVMQMVPKQN----------SYSHEEFFPHVPDDQNQWLQFHFDTQE 315 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQPNGNTNFAD- 170 D + +A + A GLF +++ P E + + F Sbjct: 316 ELDNLDKWVERAGTLPSAKGLFFNVDLADIGNREKDSRQRASQPGSEYLDEMTDNKFGSH 375 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S I + +P+ LK V G D+ + + G++ ++ GG Sbjct: 376 PKITWSTIERVMKNTHLPVALKGVQRG---EDVVIAAQKGVKAVILSNHGGRQLDFSRPP 432 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ + + ++ + + + GG+R G DILK++ LGA+ G+ Sbjct: 433 LEVLVEAKQMLKE------------KNLDGKIEIYLDGGVRRGSDILKALCLGATGVGMG 480 Query: 288 SPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL + V LR E +M LLG ++++L Sbjct: 481 RPFLYAMSGYGEEGVTHLFNILRTEIENNMRLLGVDKIEDL 521 >gi|317147458|ref|XP_001822143.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 366 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 59/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD + + R L I+ D++D S E G K++FPL S ++ + Sbjct: 38 AMDLITLRENEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKL 92 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + +A AA K V M + S +++ P+ + + L L Sbjct: 93 AHPDGEVAASRAAAKYNVCMGLSSYS----NYSLEDVAAQGSGNPYAMQMCVLKDRSLTL 148 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFADLSSK 174 +++A +A G LFL ++ +++ PN ++ D S++ Sbjct: 149 QL-LERAEKA----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNR 203 Query: 175 IAL---LSSAMDVPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 L +P L K + + D+EL ++ G+ I+ GG + Sbjct: 204 TDYDPSLDWETTIPWLRKHTKLQIWLKGVYTPEDVELAIQYGVDGVIISNHGGRQLDGVP 263 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D + V GG+R G DI K++ LGAS Sbjct: 264 ATLDALRECAPV-----------------AQGRIPLAIDGGIRRGSDIFKALALGASHCF 306 Query: 286 LAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P A + + V A++ L +EF ++M L G + V+E+ + Sbjct: 307 VGRIPIWGLAWNGQEGVELAVKILLQEFRITMALAGCRSVKEIRKSHL 354 >gi|148381070|ref|YP_001255611.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 3502] gi|153932809|ref|YP_001385443.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 19397] gi|148290554|emb|CAL84682.1| putative FMN-dependent dehydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152928853|gb|ABS34353.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. ATCC 19397] Length = 337 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 121/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE GKK+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIH--DVKNPDISVELFGKKMDMPVFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G R A+ SF EL+++ + I + Sbjct: 101 --EEEYISWVIGGCRDAGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWENDNVIN 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKI 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|300812281|ref|ZP_07092717.1| dehydrogenase, FMN-dependent [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496701|gb|EFK31787.1| dehydrogenase, FMN-dependent [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 408 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 121/344 (35%), Gaps = 65/344 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 54 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 105 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A + A+A + ++ E+ AP + L + N+DF + A+ Sbjct: 106 VATQKGAALAGAMFTSSTYGNKPVE--EIAAAAPDAPRMFQL-YLSKNWDFN-KMVFDAI 161 Query: 142 HVLGADGLFLHLNPL-QEIIQPNGNTNFADLS---------------------------- 172 + G + L ++ L + N TNFA Sbjct: 162 NAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSAQN 221 Query: 173 ---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + +P+++K V C + D+E+ L +G + GG + D Sbjct: 222 IGPDDIKRIKEMSGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGGREIDGAPATID 278 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ I GG+R G + K++ LGA L G+ P Sbjct: 279 VLPEV-----------------VEAVNGRCPVIFDGGVRRGSHVFKALALGADLVGIGRP 321 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +L A+ V + I L E + M L G K ++++ Sbjct: 322 YLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDVKHARL 365 >gi|313124611|ref|YP_004034870.1| l-lactate dehydrogenase (fmn-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281174|gb|ADQ61893.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 408 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 121/344 (35%), Gaps = 65/344 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 54 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 105 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A + A+A + ++ E+ AP + L + N+DF + A+ Sbjct: 106 VATQKGAALAGAMFTSSTYGNKPVE--EIAAAAPDAPRMFQL-YLSKNWDFN-KMVFDAI 161 Query: 142 HVLGADGLFLHLNPL-QEIIQPNGNTNFADLS---------------------------- 172 + G + L ++ L + N TNFA Sbjct: 162 NAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSAQN 221 Query: 173 ---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + +P+++K V C + D+E+ L +G + GG + D Sbjct: 222 IGPDDIKRIKEMSGLPVIVKGVNC---AEDVEVALTAGADGVYVTNHGGREIDGAPATID 278 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ I GG+R G + K++ LGA L G+ P Sbjct: 279 VLPEV-----------------VEAVNGRCPVIFDGGVRRGSHVFKALALGADLVGIGRP 321 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +L A+ V + I L E + M L G K ++++ Sbjct: 322 YLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDVKHARL 365 >gi|255712889|ref|XP_002552727.1| KLTH0C11858p [Lachancea thermotolerans] gi|238934106|emb|CAR22289.1| KLTH0C11858p [Lachancea thermotolerans] Length = 555 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 133/343 (38%), Gaps = 46/343 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + I N + L E +D VD S EFLG K+S P+ IS+ G +K Sbjct: 205 DEFSIRENHYAYSRVFFKPMILQENEYD-VDTSTEFLGSKVSLPVYISAFAG--SKWAHP 261 Query: 75 INR-NLAIAAEKTKVAMAVGSQRVMF-----------SDHNAIKSFELRQ-YAPHTVLIS 121 + NL AA + + V Q H + F+ R+ + LI Sbjct: 262 LAELNLQSAAYEADIMQMVPKQNSYSIEEFYENVPEDQKHWSQYHFDSREEFNEAGTLIK 321 Query: 122 NL------GAVQLNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 L A+ LN D G ++ L + L I+ + + Sbjct: 322 KLEAQPSVKALFLNVDLRDIGNREKDSRQRALDVESS----KSLSAIV-TSDKSYAKFTW 376 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I + S+ +P+ LK V G D+ L + G++ ++ GG ++ + Sbjct: 377 KDIDQIMSSTKLPIGLKGVQRG---EDVVLAAEKGVKAVVLSNHGGRQLDFSRPPLEVLA 433 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + + ++ G+ ++ + GG+R G D++K++ LGA GL PFL Sbjct: 434 EAKQMLKERGL------------EDKIEIYLDGGIRRGSDVIKALCLGAKGVGLGRPFLY 481 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR E +M LLG +V++L N I Sbjct: 482 AMAGYGEEGVSHLLDILRNEMKNNMRLLGVDKVEDLNENLVDI 524 >gi|325684950|gb|EGD27094.1| lactate 2-monooxygenase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 414 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 120/344 (34%), Gaps = 65/344 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ RAL D EFLG KL P++IS + I+ A Sbjct: 60 NTTAFNHYQIVPRAL--TGMDNPSTETEFLGMKLKTPIMISPIA------CHGISHADAE 111 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A + A+A + ++ E+ AP + L + N+DF + A+ Sbjct: 112 VATQKGAALAGAMFTSSTYGNKPVE--EIAAAAPDAPRMFQL-YLSKNWDFN-KMVFDAI 167 Query: 142 HVLGADGLFLHLNPL-QEIIQPNGNTNFADLS---------------------------- 172 + G + L ++ L + N TNFA Sbjct: 168 NAAGYKAILLTVDALVSGYREANLRTNFAFPVPLDFFTRFQGAKGEGQTVAQMYASSAQN 227 Query: 173 ---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + +P+++K V C D+E+ L +G + GG + D Sbjct: 228 IGPDDIKRIKEMSGLPVIVKGVNCA---EDVEVALTAGADGVYVTNHGGREIDGAPATID 284 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ I GG+R G + K++ LGA L G+ P Sbjct: 285 VLPEV-----------------VEAVNGRCPVIFDGGVRRGSHVFKALALGADLVGIGRP 327 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +L A+ V + I L E + M L G K ++++ Sbjct: 328 YLYGLALGGPHGVASVINELNDELKIDMQLTGCKTIEDVKHARL 371 >gi|170759541|ref|YP_001788441.1| dehydrogenase, FMN-dependent [Clostridium botulinum A3 str. Loch Maree] gi|169406530|gb|ACA54941.1| dehydrogenase, FMN-dependent [Clostridium botulinum A3 str. Loch Maree] Length = 337 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 121/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE G+K+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIH--DAKNPDISVELFGRKMDMPIFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G R A+ SF EL+++ + I + Sbjct: 101 --EEEYISWVIGGCRDSGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWENDNVIS 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYVVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKN 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|153936151|ref|YP_001388850.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. Hall] gi|152932065|gb|ABS37564.1| dehydrogenase, FMN-dependent [Clostridium botulinum A str. Hall] Length = 337 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 121/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE GKK+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIH--DVKNPDISVELFGKKMDMPVFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G R A+ SF EL+++ + I + Sbjct: 101 --EEEYISWVIGGCRDAGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWENDNVIN 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDDIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKI 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|153940812|ref|YP_001392398.1| dehydrogenase, FMN-dependent [Clostridium botulinum F str. Langeland] gi|168181813|ref|ZP_02616477.1| dehydrogenase, FMN-dependent [Clostridium botulinum Bf] gi|237796576|ref|YP_002864128.1| dehydrogenase, FMN-dependent [Clostridium botulinum Ba4 str. 657] gi|152936708|gb|ABS42206.1| dehydrogenase, FMN-dependent [Clostridium botulinum F str. Langeland] gi|182675150|gb|EDT87111.1| dehydrogenase, FMN-dependent [Clostridium botulinum Bf] gi|229260829|gb|ACQ51862.1| dehydrogenase, FMN-dependent [Clostridium botulinum Ba4 str. 657] gi|322807430|emb|CBZ05004.1| putative glycolate oxidase [Clostridium botulinum H04402 065] Length = 337 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 121/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE G+K+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIH--DAKNPDISVELFGRKMDMPIFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G R A+ SF EL+++ + I + Sbjct: 101 --EEEYISWVIGGCRDSGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWENDNVIS 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKI 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|238496005|ref|XP_002379238.1| FMN-dependent dehydrogenase family protein [Aspergillus flavus NRRL3357] gi|220694118|gb|EED50462.1| FMN-dependent dehydrogenase family protein [Aspergillus flavus NRRL3357] Length = 378 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 132/357 (36%), Gaps = 68/357 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD + + R L I+ D++D S E G K++FPL S ++ + Sbjct: 41 AMDLITLRENEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKL 95 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + +A AA K V M + S +++ P+ + + L L Sbjct: 96 AHPDGEVAASRAAAKYNVCMGLSSYS----NYSLEDVAAQGSGNPYAMQMCVLKDRSLTL 151 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFADLSSK 174 +++A +A G LFL ++ +++ PN ++ D S++ Sbjct: 152 QL-LERAEKA----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNR 206 Query: 175 IAL------------LSSAMDVPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGR 216 L +P L K + + D+EL ++ G+ I+ Sbjct: 207 TDYGESLTNQQKDPSLDWETTIPWLRKHTKLQIWLKGVYTPEDVELAIQYGVDGVIISNH 266 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + + D + V GG+R G DI K+ Sbjct: 267 GGRQLDGVPATLDALRECAPV-----------------AQGRIPLAIDGGIRRGSDIFKA 309 Query: 277 IILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + LGAS + P A + + V A++ L +EF ++M L G + V+E+ + Sbjct: 310 LALGASHCFVGRIPIWGLAWNGQEGVELAVKILLQEFRITMALAGCRSVKEIRKSHL 366 >gi|187776961|ref|ZP_02993434.1| hypothetical protein CLOSPO_00505 [Clostridium sporogenes ATCC 15579] gi|187775620|gb|EDU39422.1| hypothetical protein CLOSPO_00505 [Clostridium sporogenes ATCC 15579] Length = 337 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 123/328 (37%), Gaps = 62/328 (18%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 ID + + LIH A D SVE G+K+ P+ + ++G M + Sbjct: 48 NIDSLDSYKLNMRLIHNA------KNPDISVELFGEKMDMPVFAAPVSGTTLNMGGKFT- 100 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN----- 122 E+ ++ +G R A+ SF EL+++ + I Sbjct: 101 ------EEEYISWVIGGCRDSGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWEND 154 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + ++L + G + G L LH P + P +I + Sbjct: 155 NIISKIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVK 203 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + +P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 204 STKLPFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE---- 256 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-D 299 + +A GG+R G+DILK I LGA + PF+ + + Sbjct: 257 -------------AVKGKVTILADGGVRTGIDILKMIALGADAVLIGRPFVTASFGGERE 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V +E+L+ E +M L G ++++ Sbjct: 304 GVKIYVENLKSELKSAMVLTGCNSIKDI 331 >gi|255526071|ref|ZP_05392994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium carboxidivorans P7] gi|296187119|ref|ZP_06855517.1| dehydrogenase, FMN-dependent [Clostridium carboxidivorans P7] gi|255510257|gb|EET86574.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium carboxidivorans P7] gi|296048313|gb|EFG87749.1| dehydrogenase, FMN-dependent [Clostridium carboxidivorans P7] Length = 337 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 123/328 (37%), Gaps = 58/328 (17%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N + D + L R + + D S E GKK+ P+ + ++G M + Sbjct: 43 EAFSVNVEALDSYKLNMRVIH--DAKDPDTSTELFGKKMEVPVFAAPVSGTTLNMGGKFT 100 Query: 77 RNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSF------ELRQYAPHTVLISN---- 122 E+ ++ +G A+ SF +L+++ + I Sbjct: 101 -------EEQYISWVIGGCLDAGIYPMVGDTAVDSFLITNLQQLKEFNGEGIAIIKPWEN 153 Query: 123 ---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + ++L+ + G + G L LH P + P +I + Sbjct: 154 SNVINKIKLSEEAGAFAVGMDIDAAGLITLALHGKP----VGPKT-------VEQIKEIV 202 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P +LK + ++ + +L +++G+ ++ GG + D+ +I Sbjct: 203 QSTKLPFILKGI---MTVDEAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE--- 256 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 + +A GG+RNGVD+LK + LGA + PF+ + Sbjct: 257 --------------AVKGKVTILADGGVRNGVDVLKMLALGADAVLIGRPFVTASFGGER 302 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + V I++++ E +M L G K V++ Sbjct: 303 EGVKLYIDTIKSELKSAMVLTGCKSVKD 330 >gi|71664482|ref|XP_819221.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70884513|gb|EAN97370.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 179 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 6/170 (3%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 TNF L K+ L + VP+++K VG G+ + + G++Y D++G GGTSW+ IE Sbjct: 1 TNFESLLHKLEELLPHIKVPVIVKGVGHGIEKRSVMALQRVGVKYIDVSGCGGTSWAWIE 60 Query: 226 SHRDLE----SDIGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIIL 279 R + ++G +F+D GI T SL+ P ++ + IA GG+R G+DI KS+++ Sbjct: 61 GWRHPDLPDDQNLGYIFRDVGITTDRSLQECAPLTQASDLRLIAGGGIRTGLDIAKSLMM 120 Query: 280 GASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 GA A PFLK A++S + V I+ +KE IV+MF G ++EL Sbjct: 121 GAECATAALPFLKAALESPERVRGVIQRFKKELIVAMFACGASTIEELRK 170 >gi|170757769|ref|YP_001782755.1| dehydrogenase, FMN-dependent [Clostridium botulinum B1 str. Okra] gi|169122981|gb|ACA46817.1| dehydrogenase, FMN-dependent [Clostridium botulinum B1 str. Okra] Length = 337 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 122/324 (37%), Gaps = 58/324 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N D + L R + D SVE G+K+ P+ + ++G M + Sbjct: 48 NIDALDSYKLNMRLIHG--AKNPDISVELFGRKMDMPIFAAPVSGTTLNMGGKFT----- 100 Query: 82 AAEKTKVAMAVGSQRVMFSDH----NAIKSF------ELRQYAPHTVLISN-------LG 124 E+ ++ +G+ R A+ SF EL+++ + I + Sbjct: 101 --EEEYISWVIGACRDSGIYPMVGDTAVDSFLITNLDELKKFNGEGIAIIKPWENDNVIS 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L + G + G L LH P + P +I + + + Sbjct: 159 KIKLAEEAGAYAVGMDIDAAGLITLALHGKP----VGPKT-------VEEIKEIVKSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ D +L +++G+ ++ GG + D+ +I Sbjct: 208 PFILKGI---MTVEDAKLAVEAGVDAIVVSNHGGRVLDQTPGVADVLPEIAE-------- 256 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 257 ---------AVKGKVTILADGGVRTGVDVLKMIALGADAVLIGRPFVTASFGGEREGVKI 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E+L+ E +M L G ++++ Sbjct: 308 YVENLKSELKSAMVLTGCNSIKDI 331 >gi|255655275|ref|ZP_05400684.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-23m63] gi|296451259|ref|ZP_06892999.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296880389|ref|ZP_06904352.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] gi|296259865|gb|EFH06720.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296428630|gb|EFH14514.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] Length = 338 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 118/321 (36%), Gaps = 50/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIH--DVSNPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISN-------LGAVQ 127 I + VA S A+ +F +++Y ++ + ++ Sbjct: 105 I---EPVVAGCANSGIYAMVGDTAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P + P +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP----VLPKN-------VEQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG ++ I Sbjct: 211 LKGI---MTVEDALMAVEAGVDAIVVSNHGGRVLDCTPGACEVLPKIAD----------- 256 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 + +A GG+R G+D+LK I LGA + PF+ + +D V + Sbjct: 257 ------AVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVETYVN 310 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L+ E SM L G + ++++ Sbjct: 311 KLQSELSSSMILTGCQTIKDI 331 >gi|126698860|ref|YP_001087757.1| putative FMN-dependent dehydrogenase [Clostridium difficile 630] gi|255100281|ref|ZP_05329258.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-63q42] gi|255306220|ref|ZP_05350392.1| putative FMN-dependent dehydrogenase [Clostridium difficile ATCC 43255] gi|115250297|emb|CAJ68119.1| putative FMN-dependent dehydrogenase [Clostridium difficile] Length = 338 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 118/321 (36%), Gaps = 50/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIH--DVSNPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISN-------LGAVQ 127 I + VA S A+ +F +++Y ++ + ++ Sbjct: 105 I---EPVVAGCANSGIYAMVGDTAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P + P +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP----VLPKN-------VKQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG ++ I Sbjct: 211 LKGI---MTVEDALMAVEAGVDAIVVSNHGGRVLDCTPGACEVLPKIAD----------- 256 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 + +A GG+R G+D+LK I LGA + PF+ + +D V + Sbjct: 257 ------AVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVETYVN 310 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L+ E SM L G + ++++ Sbjct: 311 KLQSELSSSMILTGCQTIKDI 331 >gi|71414876|ref|XP_809524.1| isopentenyl-diphosphate delta-isomerase [Trypanosoma cruzi strain CL Brener] gi|70873920|gb|EAN87673.1| isopentenyl-diphosphate delta-isomerase, putative [Trypanosoma cruzi] Length = 172 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 3/161 (1%) Query: 1 MVNDRKIDHINIVCKD--PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP 58 +V RK DHI+I ++ + + + ALPEIS ++D EF+G LSFP Sbjct: 12 IVRRRKKDHIDICLHKVVEPYKNGPSIWEKYKIPYTALPEISMGKIDTRCEFMGWTLSFP 71 Query: 59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 L+ISSMTGG + IN NLA A E + +GS R++ AI +F+++++ P Sbjct: 72 LIISSMTGG-EEHGRIINENLAKACEAEGIPFGLGSMRIVNRYAVAIHTFDVKKFCPSVP 130 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 + +N+G VQLNY FGV++ + + + ADGLF+HLN QE Sbjct: 131 MFANIGLVQLNYGFGVKEVNNLIKCVNADGLFIHLNHTQEA 171 >gi|67904054|ref|XP_682283.1| hypothetical protein AN9014.2 [Aspergillus nidulans FGSC A4] gi|40745190|gb|EAA64346.1| hypothetical protein AN9014.2 [Aspergillus nidulans FGSC A4] gi|259486535|tpe|CBF84460.1| TPA: FMN-dependent dehydrogenase family protein (AFU_orthologue; AFUA_8G02300) [Aspergillus nidulans FGSC A4] Length = 323 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 114/324 (35%), Gaps = 53/324 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD + ++ R L I+ +VD S E LG K+S P S ++ + Sbjct: 37 AMDLITLRDNEAAFDRYKILPRVL--INVAKVDTSTEILGTKVSLPFGFSPAA---SQKL 91 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA AA + M + S +++ P+ + + L + Sbjct: 92 AHPDGELATSRAAANFGICMGLSSYS----NYSLEDVAAQGMGNPYVMQMCVLRDRSITL 147 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 L N P+ + + +S I L + + LK Sbjct: 148 QL----------------LQRAENAPNRPSLPDPSLD---WASTIPWLREHTSMQIWLKG 188 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 V S D+EL + G+ I+ GG + + T SL Sbjct: 189 V---CSPADVELAIHYGVDGIVISNHGGRQLDGVPA------------------TLDSLR 227 Query: 251 MARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESL 308 + GG+R G DI K++ LGA + P A + + V AI+ L Sbjct: 228 LCAEVAKGRIPLAIDGGIRRGSDIFKALALGARYCFMGRIPIWGLAYNGQEGVELAIKIL 287 Query: 309 RKEFIVSMFLLGTKRVQELYLNTA 332 R+E V+M L G + + E+ + Sbjct: 288 RQELRVTMALAGCQTISEIRESHL 311 >gi|254974808|ref|ZP_05271280.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-66c26] gi|255092196|ref|ZP_05321674.1| putative FMN-dependent dehydrogenase [Clostridium difficile CIP 107932] gi|255313935|ref|ZP_05355518.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-76w55] gi|255516615|ref|ZP_05384291.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-97b34] gi|255649715|ref|ZP_05396617.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-37x79] gi|260682870|ref|YP_003214155.1| putative FMN-dependent dehydrogenase [Clostridium difficile CD196] gi|260686468|ref|YP_003217601.1| putative FMN-dependent dehydrogenase [Clostridium difficile R20291] gi|306519827|ref|ZP_07406174.1| putative FMN-dependent dehydrogenase [Clostridium difficile QCD-32g58] gi|260209033|emb|CBA62139.1| putative FMN-dependent dehydrogenase [Clostridium difficile CD196] gi|260212484|emb|CBE03399.1| putative FMN-dependent dehydrogenase [Clostridium difficile R20291] Length = 338 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 118/321 (36%), Gaps = 50/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + + R + D S+E GKK+S P+ + +TG M +IN Sbjct: 47 ENSKSLEKVKVNMRVIH--DVSNPDTSIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDY 104 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISN-------LGAVQ 127 I + VA S A+ +F +++Y ++ + ++ Sbjct: 105 I---EPVVAGCANSGIYAMVGDTAVDAFLMENLDVVKKYNGAGIVFIKPWDNENIIKKIR 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 L + G + G L LH P + P +I L + +P + Sbjct: 162 LAEEAGAFAVGVDIDACGLVTLSLHGKP----VLPKN-------VKQIKELVKSTKLPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ D + +++G+ ++ GG ++ I Sbjct: 211 LKGI---MTVEDALMAVEAGVYAIVVSNHGGRVLDCTPGACEVLPKIAD----------- 256 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 + +A GG+R G+D+LK I LGA + PF+ + +D V + Sbjct: 257 ------AVKGKVTILADGGVRTGLDVLKMIGLGADAVLIGRPFVTASFGGATDGVETYVN 310 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L+ E SM L G + ++++ Sbjct: 311 KLQSELSSSMILTGCQTIKDI 331 >gi|83770006|dbj|BAE60141.1| unnamed protein product [Aspergillus oryzae] Length = 347 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 132/361 (36%), Gaps = 78/361 (21%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N+ FD + + R L I+ D++D S E G K++FPL S ++ + + Sbjct: 6 LRENEASFDRYKIRPRIL--INVDQIDTSTEIFGTKVAFPLGFSPAA---SQKLAHPDGE 60 Query: 79 LA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 +A AA K V M + S +++ P+ + + L L +++ Sbjct: 61 VAASRAAAKYNVCMGLSSYS----NYSLEDVAAQGSGNPYAMQMCVLKDRSLTLQL-LER 115 Query: 137 AHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFADLSSKIAL--- 177 A +A G LFL ++ +++ PN ++ D S++ Sbjct: 116 AEKA----GYKALFLSVDVPLLGKRLNEYRNNYTLPEDMSWPNILSHGLDTSNRTDYDPS 171 Query: 178 LSSAMDVPLLLKEVGCGL-------------------------SSMDIELGLKSGIRYFD 212 L +P L K + + D+EL ++ G+ Sbjct: 172 LDWETTIPWLRKHTKLQIWLKGGVYSLFYKSTINHKLTLPAVYTPEDVELAIQYGVDGVI 231 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 I+ GG + + D + V GG+R G D Sbjct: 232 ISNHGGRQLDGVPATLDALRECAPV-----------------AQGRIPLAIDGGIRRGSD 274 Query: 273 ILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ LGAS + P A + + V A++ L +EF ++M L G + V+E+ + Sbjct: 275 IFKALALGASHCFVGRIPIWGLAWNGQEGVELAVKILLQEFRITMALAGCRSVKEIRKSH 334 Query: 332 A 332 Sbjct: 335 L 335 >gi|329668133|gb|AEB94081.1| glycolate oxidase [Lactobacillus johnsonii DPC 6026] Length = 412 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 72/353 (20%), Positives = 129/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + + EFLG KL P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--DPELNTEFLGMKLKTPVMICPIACHGIANA 102 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ AM+ + + + NA+ +P + + + N+D Sbjct: 103 EAEIDTAKGAKVAGALFAMSTYANKSVQEVQNAVG------DSPRFMQL----YLSKNWD 152 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DL---------- 171 F ++V G G FL ++ L + N TNF + Sbjct: 153 FNKMVIEESVKA-GFSGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWNGGKGEGQSV 211 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 212 AQMYASSAQNIGPDDIRRIKEIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I + + I GG+R G + K++ L Sbjct: 269 EVDGAPATIDVLPEIAKA--------------VKSCDHRVPIILDGGVRRGSHVFKALAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + IE L KE ++ M L G K ++++ Sbjct: 315 GADLVGIGRPFLYGLALGGAQGVQSVIEQLNKELLIDMQLTGCKTIEDIKHAK 367 >gi|315039133|ref|YP_004032701.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1112] gi|312277266|gb|ADQ59906.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1112] Length = 409 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 120/352 (34%), Gaps = 65/352 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL D+ EF+G KL P++IS + Sbjct: 45 AENEWTWRANTSAFNHYQIVPRAL--TDMDDPQTDTEFMGMKLKTPIMISPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + A A + +++ ++ AP L + ++DF Sbjct: 97 HGIAHKDAEVATQKGAAAAGALFSSSTYANKSVE--DIAAAAPEAPRFFQL-YLSKDWDF 153 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------- 172 + A+ +G G+FL ++ L + N T+F Sbjct: 154 N-KMVFDAIKKVGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVA 212 Query: 173 ------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 +A + +P+ +K V + + D + +G + GG Sbjct: 213 QMYASSAQKIGPEDVARIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGRE 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D+ +I A+ + + G+R G + K++ LG Sbjct: 270 VDGAPATIDVLPEI-----------------AKAVNHRVPIVFDSGVRRGSHVFKALALG 312 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A + G+ P+L A+ V + I L E + M L G K + ++ Sbjct: 313 ADIVGIGRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDVKRAK 364 >gi|327184249|gb|AEA32696.1| L-lactate oxidase [Lactobacillus amylovorus GRL 1118] Length = 409 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 119/352 (33%), Gaps = 65/352 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL D+ EF+G KL P++IS + Sbjct: 45 AENEWTWRANTSAFNHYQIVPRAL--TDMDDPQTDTEFMGMKLKTPIMISPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + A A + +++ ++ AP L + ++DF Sbjct: 97 HGIAHKDAEVATQKGAAAAGALFSSSTYANKSVE--DIAAAAPEAPRFFQL-YLSKDWDF 153 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------- 172 + A+ G G+FL ++ L + N T+F Sbjct: 154 N-KMVFDAIKKAGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVA 212 Query: 173 ------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 +A + +P+ +K V + + D + +G + GG Sbjct: 213 QMYASSAQKIGPEDVARIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGRE 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D+ +I A+ + + G+R G + K++ LG Sbjct: 270 VDGAPATIDVLPEI-----------------AKAVNHRVPIVFDSGVRRGSHVFKALALG 312 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A + G+ P+L A+ V + I L E + M L G K + ++ Sbjct: 313 ADIVGIGRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDVKRAK 364 >gi|42519875|ref|NP_965805.1| glycolate oxidase [Lactobacillus johnsonii NCC 533] gi|41584165|gb|AAS09771.1| glycolate oxidase [Lactobacillus johnsonii NCC 533] Length = 412 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 129/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + EFLG KL P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--NPELNTEFLGMKLKTPVMICPIACHGIANA 102 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ A AM+ + + + +A+ +P + + + N+D Sbjct: 103 EAEIDTAKGAKAAGALFAMSTYANKSVQEVQSAVGD------SPRFMQL----YLSKNWD 152 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DL---------- 171 F ++V G G FL ++ L + N TNF + Sbjct: 153 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWNGGKGEGQSV 211 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 212 AQMYASSAQNIGPDDIRKIKEIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I R + I GG+R G + K++ L Sbjct: 269 EVDGAPATIDVLPEIAKA--------------VRSSNHRVPIILDGGVRRGSHVFKALAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + IE L KE ++ M L G K ++++ Sbjct: 315 GADLVGIGRPFLYGLALGGAQGVQSVIEQLNKELLIDMQLTGCKTIEDIKHAK 367 >gi|325957604|ref|YP_004293016.1| L-lactate oxidase [Lactobacillus acidophilus 30SC] gi|325334169|gb|ADZ08077.1| L-lactate oxidase [Lactobacillus acidophilus 30SC] Length = 409 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 119/352 (33%), Gaps = 65/352 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL D+ EF+G KL P++IS + Sbjct: 45 AENEWTWRANTSAFNHYQIVPRAL--TDMDDPQTDTEFMGMKLKTPIMISPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + A A + +++ ++ AP L + ++DF Sbjct: 97 HGIAHKDAEVATQKGAAAAGALFSSSTYANKSVE--DIAAAAPEAPRFFQL-YLSKDWDF 153 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------- 172 + A+ G G+FL ++ L + N T+F Sbjct: 154 N-KMVFDAIKKAGYKGIFLTVDALVSGYREANLRTHFTYPVPLDFFTRYLGGKGEGQSVA 212 Query: 173 ------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 +A + +P+ +K V + + D + +G + GG Sbjct: 213 QMYASSAQKIGPEDVARIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGRE 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D+ +I A+ + + G+R G + K++ LG Sbjct: 270 VDGAPATIDVLPEI-----------------AKAVNHRVPIVFDSGVRRGSHVFKALSLG 312 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A + G+ P+L A+ V + I L E + M L G K + ++ Sbjct: 313 ADIVGIGRPYLYGLALGGPKGVESVINQLNTELKIDMQLTGCKTIDDVKRAK 364 >gi|229000713|ref|ZP_04160228.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] gi|228759048|gb|EEM08079.1| Isopentenyl-diphosphate delta-isomerase [Bacillus mycoides Rock3-17] Length = 177 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 2/150 (1%) Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 KEVG G+S + L + G++Y D++GRGGT++ IE+ R + + ++WG +P+S Sbjct: 8 KEVGFGMSKKTLHLLNEIGVQYIDVSGRGGTNFIGIENQRREKKEYD-YLKEWGQTSPIS 66 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIES 307 L A+ Y N ASGG+RN +D++K + LGA GLASP L+ + D + I Sbjct: 67 LLEAQEYMNRMTIFASGGIRNPLDVVKCLSLGAKAVGLASPVLRVLQKEGVDYAIQEINR 126 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +LG + + EL + +I + Sbjct: 127 WHDQIKTICTMLGVRTIDELGACSLVITKE 156 >gi|289423550|ref|ZP_06425351.1| dehydrogenase, FMN-dependent [Peptostreptococcus anaerobius 653-L] gi|289156052|gb|EFD04716.1| dehydrogenase, FMN-dependent [Peptostreptococcus anaerobius 653-L] Length = 339 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 125/337 (37%), Gaps = 64/337 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K D L R + D+VD S+E G+KLS P++ + +TG + M + Sbjct: 47 ENVKAIDKIKLNMRVIH--DVDKVDTSLELFGRKLSLPVMAAPITGTSLNMGGLVTEKEY 104 Query: 81 IA------AEKTKVAMAVGSQRVMFSDHNA-------------IKSFELRQYAPHTVLIS 121 I K +AM + F N IK +E Sbjct: 105 IVPVVEGCKNKGTLAMVGDTAIDQFLLDNLEVLDNNGGEGIVFIKPWENDNVIKKIREAE 164 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 +GAV + D + G L LH P++ A +I L + Sbjct: 165 KVGAVAVGVD---------IDACGLVTLSLHGKPVK-----------AKTVDEIKELVQS 204 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 ++P +LK + ++ + E +++G+ ++ GG D+ DI Sbjct: 205 TELPFILKGI---MTPDEAEKAVEAGVYGIVVSNHGGRVQDYTPGTADVLEDI------- 254 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DA 300 A+ + GG+R GVD+LK I LGA + PF+ + + Sbjct: 255 ----------AKVVNKRIKVFVDGGIRTGVDVLKMIALGADACLIGRPFVTASFGGEVEG 304 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V I+ L+ E SM L G K ++ + ++ +I + Sbjct: 305 VEMYIDRLKSELEGSMILTGCKNLESI--DSRVIYGR 339 >gi|115433562|ref|XP_001216918.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189770|gb|EAU31470.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 351 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 128/339 (37%), Gaps = 63/339 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK--LSFPLLISSMTGGNNK 70 + N+ FD + ++ R L ++ D++D S E LG K ++ P S ++ Sbjct: 38 AMDLITLRENEAAFDRYKILPRTL--VNVDKIDTSTEILGTKSQVALPFGFSPAA---SQ 92 Query: 71 MIERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + + LA AA K + M + S + A + F VL +QL Sbjct: 93 KLAHPDGELAVSRAAAKYGICMGLSSYSNYPLEDVADQGFGNPYAMQMCVLRDRSITIQL 152 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFADLS 172 +Q+A +A G LFL ++ +++ PN ++ +D S Sbjct: 153 -----LQRAEKA----GYKALFLSVDVPVLGKRLNEYRNNYELPKDMSWPNILSSGSDTS 203 Query: 173 SKIAL---LSSAMDVPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGRGGTSWSR 223 ++ L +P L K + + D+EL ++ G+ I+ GG Sbjct: 204 NRTDYDPSLDWESTIPWLRKHTTLKIWLKGICNPDDVELAIRYGVDGIIISNHGGRQLDG 263 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGAS 282 I + T +L + P GG+R G DI K++ LGAS Sbjct: 264 IPA------------------TLDALRLCAPVAKGRIPLAIDGGIRRGSDIFKALALGAS 305 Query: 283 LGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + P A D + V AI LR+E ++M L G Sbjct: 306 YCFMGRIPIWGLAYDGQNGVELAIRILRQELRITMALAG 344 >gi|300362719|ref|ZP_07058894.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus gasseri JV-V03] gi|300353147|gb|EFJ69020.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus gasseri JV-V03] Length = 412 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 72/353 (20%), Positives = 129/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + + EFLG KL P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--DPELNTEFLGMKLKTPVMICPIACHGIANA 102 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ A M+ + + + +A+ +P + + + N+D Sbjct: 103 EAEIDTAKGAKAAGALFGMSTYANKSVQDVQSAVG------DSPRFMQL----YLSKNWD 152 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DLS--------- 172 F ++V G G FL ++ L + N TNF + + Sbjct: 153 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWTGGKGEGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 212 AEMYASSAQNIGPDDIRKIKDIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I + P I GG+R G + K++ L Sbjct: 269 EVDGAPATIDVLPEIAKAVKSCDRP--------------VPIILDGGVRRGSHVFKALAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + IE L KE ++ M L G K + ++ Sbjct: 315 GADLVGIGRPFLYGLALGGAQGVQSVIEQLNKELLIDMQLTGCKTIDDIKHAK 367 >gi|268320243|ref|YP_003293899.1| lactate oxidase [Lactobacillus johnsonii FI9785] gi|262398618|emb|CAX67632.1| lactate oxidase [Lactobacillus johnsonii FI9785] Length = 412 Score = 166 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 130/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + + EFLG KL P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--DPELNTEFLGMKLKTPVMICPIACHGIANA 102 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ A M+ + + + +A+ +P + + + N+D Sbjct: 103 EAEIDTAKGAKAAGALFGMSTYANKSVQDVQSAVG------DSPRFMQL----YLSKNWD 152 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DLS--------- 172 F ++V G G FL ++ L + N TNF + + Sbjct: 153 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWTGGKGEGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 212 AQMYASSAQNIGPDDIRKIKEIADVPVIVKGVECA---EDAVLAIGAGADGIVVSNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I + P I GG+R G + K++ L Sbjct: 269 EVDGAPATIDVLPEIAKAVKSCDHP--------------VPIILDGGVRRGSHVFKALAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + I+ L KE ++ M L G K ++++ Sbjct: 315 GADLVGIGRPFLYGLALGGAQGVQSVIDQLNKELLIDMQLTGCKTIEDIKHAK 367 >gi|227894016|ref|ZP_04011821.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus ultunensis DSM 16047] gi|227864098|gb|EEJ71519.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus ultunensis DSM 16047] Length = 409 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 118/352 (33%), Gaps = 65/352 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL + +F+G KL P++IS + Sbjct: 45 AENEWTWRANTSAFNHYQIVPRAL--TDMQDPQTDTQFMGMKLKTPIMISPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + VA A + +++ ++ AP L + ++DF Sbjct: 97 HGIAHKDAEVATQKGVAAAGALFSSSTYANKSVE--DIAAVAPEAPRFFQL-YLSKDWDF 153 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------- 172 + A+ G+FL ++ L + N T F Sbjct: 154 N-KMVFDAIKKADYKGIFLTVDALVSGYREANLRTKFTYPVPLDFFTRYLGAKGEGQSVA 212 Query: 173 ------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 +A + + + +K V + + D + +G + GG Sbjct: 213 QMYAASAQKIGPEDVARIKKESGLSVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGRE 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D+ +I A+ + + G+R G + K++ LG Sbjct: 270 IDGSPATIDVLPEI-----------------AKAVNHRVPIVFDSGVRRGSHVFKALALG 312 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A L G+ P+L A+ V + I+ L E + M L G K ++++ Sbjct: 313 ADLVGIGRPYLYGLALGGPKGVESVIDQLNTELKIDMQLTGCKTIEDIKHAK 364 >gi|300856599|ref|YP_003781583.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium ljungdahlii DSM 13528] gi|300436714|gb|ADK16481.1| predicted FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium ljungdahlii DSM 13528] Length = 338 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 117/323 (36%), Gaps = 50/323 (15%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N L R + + D S+E GKK+ P+ + ++G M + Sbjct: 43 DSFKENFNSLSKCKLNMRVIH--DAKDPDTSIELFGKKMDIPVFAAPVSGTTLNMGGKFT 100 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISN-------L 123 I++ + + A+ SF +L+++ + + + Sbjct: 101 EEEYISSVIGG---CLDAGIYPMVGDTAVDSFLITNLEKLKEFNGEGIAVIKPWENKNVI 157 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 ++L G + G L LH P + P +I + + Sbjct: 158 SKIKLAEKAGAFAVGMDIDAAGLITLALHGKP----VGPKT-------LEEIKEVVESTK 206 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P +LK + ++ + EL +K+G+ ++ GG + ++ +I + Sbjct: 207 LPFILKGI---MTPDEAELAVKAGVSAIVVSNHGGRVLDQTPGVAEVLPEIAKL------ 257 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 + +A GG+R GVD+LK + LGA + PF+ + + V Sbjct: 258 -----------VKGKVTILADGGVRTGVDVLKMLALGADAVLIGRPFVTASFGGQREGVK 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQ 325 +E+L+ E +M L G K V+ Sbjct: 307 VYVENLKSELKSAMVLTGCKSVK 329 >gi|70982897|ref|XP_746976.1| FMN-dependent dehydrogenase family protein [Aspergillus fumigatus Af293] gi|66844601|gb|EAL84938.1| FMN-dependent dehydrogenase family protein [Aspergillus fumigatus Af293] gi|159123861|gb|EDP48980.1| FMN-dependent dehydrogenase family protein [Aspergillus fumigatus A1163] Length = 374 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 125/358 (34%), Gaps = 77/358 (21%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N+ FD + ++ R L + D VD + E LG K+S P S ++ + + Sbjct: 34 LRENEAAFDRYKILPRVL--RNVDNVDTTTEILGTKVSLPFGFSPAA---SQKLAHPDGE 88 Query: 79 LA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 LA AA K + M + S +++ P+ + + L + +++ Sbjct: 89 LAASRAAAKYGICMGLSSYS----NYSLEDVAAQGTGNPYVMQMCVLRDRSITIQL-LER 143 Query: 137 AHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTNFADLSSKIAL--- 177 A +A G LFL ++ +++ PN + AD S++ Sbjct: 144 AQKA----GYKALFLSVDVPVLGKRLNEYRNSYTLPEDMNWPNILSCGADTSNRTDYDPS 199 Query: 178 LSSAMDVPLLLKEVGCGL------SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 L +P L K + S D+EL + G+ I+ GG I + D Sbjct: 200 LDWETTIPWLRKHTSLQIWLKGICSPADVELAIHYGVDGIVISNHGGRQLDGIPATLDAL 259 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PF 290 + GG+R G DI K++ LGAS + P Sbjct: 260 RLCAPI-----------------ARGRIPLAIDGGIRRGSDIFKALALGASYCFVGRIPI 302 Query: 291 LKPA------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A + + V AI L++E ++M L G + ++ + Sbjct: 303 WGLAVSFVLWHVAMIGLANYIQYNGQEGVELAIRILQQELKITMALAGCTSISDINES 360 >gi|260947832|ref|XP_002618213.1| hypothetical protein CLUG_01672 [Clavispora lusitaniae ATCC 42720] gi|238848085|gb|EEQ37549.1| hypothetical protein CLUG_01672 [Clavispora lusitaniae ATCC 42720] Length = 544 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 123/335 (36%), Gaps = 43/335 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ + +AL + +V S + LG PL IS G + Sbjct: 194 DEFSLRENRYAYSRVFFKPKALQ--NVQQVSTSTKMLGIDAELPLYISGFAGSCLAHPDA 251 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVL--------- 119 NL AA K K+ V Q + D + + + L Sbjct: 252 -EWNLQRAAYKEKIVQMVPKQNSIDFDEFFDGVPADQEQWAQLHFYTDEELENMDEYINR 310 Query: 120 ---ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 N+ + N D G ++ V L D L LN + F Sbjct: 311 FESRKNIKGIFFNVDVTALGNREKDSKVRALDED-LGETLNEMANNSGAEYCKTFTW--D 367 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + L ++P+ LK + G D+ L ++GI+ ++ GG ++ ++ Sbjct: 368 HVRKLVQKTNLPVGLKGIQRG---EDVVLAAQNGIKAVILSNHGGRQLDFSRPPLEVLAE 424 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + ++ G+ + + GG+R G DI+K+I LGA G+ PFL Sbjct: 425 AKQMLKENGL------------EKDIEIYVDGGIRRGSDIIKAICLGAKGVGMGRPFLYA 472 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A VV AI+ L+ E I +M LLG + + EL Sbjct: 473 MAGYGEAGVVRAIQILKMEMINNMRLLGARNIAEL 507 >gi|256843513|ref|ZP_05549001.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] gi|256614933|gb|EEU20134.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] Length = 426 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 117/354 (33%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL E+ + +F+G L P++I+ + Sbjct: 45 AENEWTWRNNTAAFNHFQIVPRALTEM--ADPQTDTDFMGMHLKTPIMIAPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 97 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 151 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 Q A+ G G+FL ++ L + N TNF Sbjct: 152 NFNQMVFDAIKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 212 AQMYASSAQKIGPEDVKRIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 269 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 311 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 312 GADIVGIGRPYLYGLALGGAHGVASVIEQLNDELKIDMQLTGCKTIDDVKHAKL 365 >gi|210622544|ref|ZP_03293237.1| hypothetical protein CLOHIR_01185 [Clostridium hiranonis DSM 13275] gi|210154179|gb|EEA85185.1| hypothetical protein CLOHIR_01185 [Clostridium hiranonis DSM 13275] Length = 338 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 111/318 (34%), Gaps = 44/318 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + + L R + + + D S+E GKK+ P+ + +TG M ++ Sbjct: 47 ENVRALERVKLNMRVIH--NAADPDTSIELFGKKMDAPIFAAPITGTTLNMGGQLTEREY 104 Query: 81 -----IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL--ISN---LGAVQLNY 130 + VG V + + + N + ++L Sbjct: 105 IEPVVEGCANAGIYAMVGDTAVDAFLIENLDVLKCHDGNGIVFIKPWDNENIIKKIRLAE 164 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + G + G L LH P+ +I L + ++P +LK Sbjct: 165 EAGAFAVGVDIDACGLVTLSLHGKPV-----------VPKDLEQIKELVKSTELPFILKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ D + +++G ++ GG D+ +I Sbjct: 214 I---MTVEDALMAVEAGADAIVVSNHGGRVLDFTPGSADVLPEI---------------- 254 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 A+ + + + GG+R GVD++K I LGA + PF+ + +D V + ++ Sbjct: 255 -AKAVKGKIKILVDGGVRTGVDVVKMIGLGADAVLIGRPFVTASFGGATDGVETYVNKIK 313 Query: 310 KEFIVSMFLLGTKRVQEL 327 E +M L G + E+ Sbjct: 314 SEIKGAMILTGCSNISEI 331 >gi|295693250|ref|YP_003601860.1| L-lactate oxidase [Lactobacillus crispatus ST1] gi|295031356|emb|CBL50835.1| L-lactate oxidase [Lactobacillus crispatus ST1] Length = 426 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 117/354 (33%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL E+ + +F+G L P++I+ + Sbjct: 45 AENEWTWRNNTAAFNHFQIVPRALTEM--ADPQTDTDFMGMHLKTPIMIAPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 97 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 151 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 + AV G G+FL ++ L + N TNF Sbjct: 152 NFNKMVFDAVKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 212 AQMYASSAQKIGPEDVKRIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 269 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 311 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 312 GADIVGIGRPYLYGLALGGAHGVASVIEQLNDELKIDMQLTGCKTIDDVKHAKL 365 >gi|117803|sp|P09437|CYB2_HANAN RecName: Full=Cytochrome b2, mitochondrial; AltName: Full=L-lactate dehydrogenase [Cytochrome]; AltName: Full=L-lactate ferricytochrome C oxidoreductase; Short=L-LCR; Flags: Precursor gi|2748|emb|CAA34183.1| L-lactate:cytochrome c oxidoreductase preprotein [Wickerhamomyces anomalus] Length = 573 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 125/352 (35%), Gaps = 69/352 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N + + L I +VD S EF G+K S P IS+ G+ Sbjct: 213 ADDEVTLRENHNAYHRIFFNPKIL--IDVKDVDISTEFFGEKTSAPFYISATALAKLGHP 270 Query: 70 KMIERINR---NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + I + + + +A + + ++L A ++ Sbjct: 271 EGEVAIAKGAGREDVVQMISTLASCSFDEIADARIPGQQQWYQLYVNADRSI-------- 322 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ------EIIQP-NGNTNFADLSSKIAL-- 177 +KA + G GLF+ ++ ++ +++ I Sbjct: 323 -------TEKAVRHAEERGMKGLFITVDAPSLGRREKDMKMKFEADSDVQGDDEDIDRSQ 375 Query: 178 ---------------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + S +P+++K V D+ L + G++ ++ Sbjct: 376 GASRALSSFIDPSLSWKDIAFIKSITKMPIVIKGVQR---KEDVLLAAEHGLQGVVLSNH 432 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + ++ +++ + ++ G+ + GG+R G D+LK+ Sbjct: 433 GGRQLDYTRAPVEVLAEVMPILKERGLD------------QKIDIFVDGGVRRGTDVLKA 480 Query: 277 IILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA GL PFL D V AI+ L+ E ++M LLG +++EL Sbjct: 481 LCLGAKGVGLGRPFLYAMSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEEL 532 >gi|256849717|ref|ZP_05555148.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] gi|256713206|gb|EEU28196.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] Length = 426 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 116/354 (32%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL + + +F+G L P++I+ + Sbjct: 45 AENEWTWRNNTAAFNHFQVVPRAL--TDMADPQTNTDFMGMHLKTPIMIAPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 97 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 151 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 Q A+ G G+FL ++ L + N TNF Sbjct: 152 NFNQMVFDAIKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 212 AQMYASSAQKIGPEDVERIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 269 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 311 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 312 GADIVGIGRPYLYGLALGGAHGVASVIEQLNAELKIDMQLTGCKTIDDVKHAKL 365 >gi|227878953|ref|ZP_03996854.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus JV-V01] gi|227861436|gb|EEJ69054.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus JV-V01] Length = 433 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 116/354 (32%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL + + +F+G L P++I+ + Sbjct: 52 AENEWTWRNNTAAFNHFQVVPRAL--TDMADPQTNTDFMGMHLKTPIMIAPIA------C 103 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 104 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 158 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 Q A+ G G+FL ++ L + N TNF Sbjct: 159 NFNQMVFDAIKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 218 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 219 AQMYASSAQKIGPEDVERIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 275 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 276 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 318 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 319 GADIVGIGRPYLYGLALGGAHGVASVIEQLNAELKIDMQLTGCKTIDDVKHAKL 372 >gi|312978315|ref|ZP_07790058.1| lactate 2-monooxygenase [Lactobacillus crispatus CTV-05] gi|310894834|gb|EFQ43905.1| lactate 2-monooxygenase [Lactobacillus crispatus CTV-05] Length = 426 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 117/354 (33%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL E+ + +F+G L P++I+ + Sbjct: 45 AENEWTWRNNTAAFNHFQIVPRALTEM--ADPQTDTDFMGMHLKTPIMIAPIA------C 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 97 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 151 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 Q A+ G G+FL ++ L + N TNF Sbjct: 152 NFNQMVFDAIKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 212 AQMYASSAQKIGPEDVKRIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 269 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 311 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 312 GADIVGIGCPYLYGLALGGAHGVASVIEQLNDELKIDMQLTGCKTIDDVKHAKL 365 >gi|262046708|ref|ZP_06019669.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] gi|260573157|gb|EEX29716.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] Length = 405 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 117/354 (33%), Gaps = 67/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F+ + ++ RAL E+ + +F+G L P++I+ + Sbjct: 24 AENEWTWRNNTAAFNHFQIVPRALTEM--ADPQTDTDFMGMHLKTPIMIAPIA------C 75 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A A + AMA + + + + A + L+ D+ Sbjct: 76 HGIAHKDAEVATQKGAAMAG-----ALFSSSTYANKSVEEIAAAAPEAPRFFQLYLSKDW 130 Query: 133 G-VQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLS------------------ 172 Q A+ G G+FL ++ L + N TNF Sbjct: 131 NFNQMVFDAIKKAGYQGIFLTVDALVSGYREANLRTNFTYPVPLDFFKRYLGAKGKGQSV 190 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P+ +K V + + D + +G + GG Sbjct: 191 AQMYASSAQKIGPEDVKRIKKESGLPVFVKGV---MCAEDAYKAIGAGADGIYVTNHGGR 247 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I A+ + I G+R G I K++ L Sbjct: 248 EVDGAPATIDVLPEI-----------------AQAVNHRVPIIFDSGVRRGSHIFKALAL 290 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P+L A+ + V + IE L E + M L G K + ++ Sbjct: 291 GADIVGIGRPYLYGLALGGAHGVASVIEQLNAELKIDMQLTGCKTIDDVKHAKL 344 >gi|242815236|ref|XP_002486530.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] gi|218714869|gb|EED14292.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] Length = 497 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 123/363 (33%), Gaps = 71/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L + ++VD S LG K S P I++ G Sbjct: 135 ADDEITMRENHTAFHKVWFRPRIL--VDVEKVDFSTTMLGSKTSVPFYITATALGKLGHP 192 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ + N + +A + V ++ +L + Sbjct: 193 EGEVVLTKAAHNHEVIQMIPTLASCSFDEIVDARKGEQVQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 ++ Q G LF+ ++ Q + F+D Sbjct: 245 -------TKRIVQHAEKRGCKALFITVDAPQLGRREKDMRVKFSDTGSNVQASGGDSIDR 297 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V C D+ +++G++ ++ Sbjct: 298 SQGAARAISSFIDPSLSWKDIPWFLSITKMPIILKGVQC---VEDVLRAVEAGVQGVVLS 354 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ V ++ R + N+ + GG+R G DI+ Sbjct: 355 NHGGRQLDFARSGIEILAEVMPVLRE------------RGWENKIEIFIDGGIRRGTDII 402 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + + V A + L+ E ++M L+G + +L + Sbjct: 403 KALCLGAKGVGIGRPFLYAMSAYGQEGVERAFQLLKDELEMNMRLIGAATIDDLKPSMVD 462 Query: 334 IRH 336 R Sbjct: 463 TRG 465 >gi|282850737|ref|ZP_06260112.1| dehydrogenase, FMN-dependent [Lactobacillus gasseri 224-1] gi|282558145|gb|EFB63732.1| dehydrogenase, FMN-dependent [Lactobacillus gasseri 224-1] Length = 412 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 129/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + EFLG +L P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--DPKLNTEFLGMELKTPVMICPIACHGIANA 102 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 ++ A M+ + + + +A+ +P + + + N+D Sbjct: 103 EAEVDTAKGAKAAGALFGMSTYANKSVQDVQSAVGD------SPRFMQL----YLSKNWD 152 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DLS--------- 172 F ++V G G FL ++ L + N TNF + + Sbjct: 153 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWTGGKGEGQSV 211 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 212 AQMYASSAQNIGPDDIRKIKEIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGR 268 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I + P I GG+R G + K++ L Sbjct: 269 EVDGAPATIDVLPEIAKAVKSCDHP--------------VPIILDGGVRRGSHVFKALAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + I+ L KE ++ M L G K ++++ Sbjct: 315 GADLVGIGRPFLYGLALGGAQGVQSVIDQLNKELLIDMQLTGCKTIEDIKHAK 367 >gi|116630404|ref|YP_819557.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus gasseri ATCC 33323] gi|116095986|gb|ABJ61138.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus gasseri ATCC 33323] Length = 417 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 129/353 (36%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + EFLG +L P++I + G Sbjct: 50 AENEWTWRNNTQAFNHFQIVPRALTGMQ--DPKLNTEFLGMELKTPVMICPIACHGIANA 107 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 ++ A M+ + + + +A+ +P + + + N+D Sbjct: 108 EAEVDTAKGAKAAGALFGMSTYANKSVQDVQSAVGD------SPRFMQL----YLSKNWD 157 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DLS--------- 172 F ++V G G FL ++ L + N TNF + + Sbjct: 158 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWTGGKGEGQSV 216 Query: 173 -------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 217 AQMYASSAQNIGPDDIRKIKEIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGR 273 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I + P I GG+R G + K++ L Sbjct: 274 EVDGAPATIDVLPEIAKAVKSCDHP--------------VPIILDGGVRRGSHVFKALAL 319 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL A+ + V + I+ L KE ++ M L G K ++++ Sbjct: 320 GADLVGIGRPFLYGLALGGAQGVQSVIDQLNKELLIDMQLTGCKTIEDIKHAK 372 >gi|119483932|ref|XP_001261869.1| (S)-2-hydroxy-acid oxidase [Neosartorya fischeri NRRL 181] gi|119410025|gb|EAW19972.1| (S)-2-hydroxy-acid oxidase [Neosartorya fischeri NRRL 181] Length = 342 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 114/319 (35%), Gaps = 57/319 (17%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA--IAAEKTKVAMAVGSQRV 97 + D VD + E LG K+S P S ++ + + LA AA K + M + S Sbjct: 39 NVDHVDTTTEILGTKVSLPFGFSPAA---SQKLAHSDGELAASRAAAKYGICMGLSSYS- 94 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL- 156 +++ P+ + + L + +++A +A G LFL ++ Sbjct: 95 ---NYSLEDVAAQGTGNPYVMQMCVLRDRSITKQL-LERAQKA----GYKALFLSVDVPV 146 Query: 157 ---------------QEIIQPNGNTNFADLSSKIAL---LSSAMDVPLLLKEVGCGL--- 195 +++ PN + AD S + L +P L K + Sbjct: 147 LGKRLNEYRNSYTLPEDMNWPNILSCGADTSHRTDYDPSLDWETTIPWLRKHTSLQIWLK 206 Query: 196 ---SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 S D+EL + G+ I+ GG I + D + Sbjct: 207 GICSPADVELAIHYGVDGIVISNHGGRQLDGIPATLDALRLCAPI--------------- 251 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKE 311 GG+R G DI K++ LGAS + P A + + V AI LR+E Sbjct: 252 --ARGRIPLAIDGGIRRGSDIFKALALGASYCFVGRIPIWGLAYNGQEGVELAIRILRQE 309 Query: 312 FIVSMFLLGTKRVQELYLN 330 ++M L G + ++ + Sbjct: 310 LKITMALAGCTSISDINES 328 >gi|241950355|ref|XP_002417900.1| L-lactate dehydrogenase [cytochrome], putative; L-lactate ferricytochrome c oxidoreductase, putative; cytochrome b2, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223641238|emb|CAX45618.1| L-lactate dehydrogenase [cytochrome], putative [Candida dubliniensis CD36] Length = 560 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 119/347 (34%), Gaps = 70/347 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + R + I EVD S LG +S P I++ G K++ R Sbjct: 211 NTGSYQRILFKPRVM--IDVTEVDTSTTMLGTNVSAPFYITATALGKLGHPDGEKVLTRG 268 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 I +A + V S N + F+L V + + + Sbjct: 269 AYKHDIIQMIPTLASCSFDEIVDESKPNQTQWFQL--------------YVNSDREITKK 314 Query: 136 KAHQAVHVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD--------- 170 A G GLF+ ++ Q +Q + Sbjct: 315 IVQHA-EARGMKGLFITVDAPQLGRREKDMKTKSIVDLSFVQGEDDEADRSQGSARAISS 373 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + S +P++LK V D + + G ++ GG Sbjct: 374 FIDTSLSWKDLEWFKSITKMPIILKGVQR---VEDAIIAAEHGCAGVVLSNHGGRQLEFS 430 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ +++ + ++ G+ ++ + GG+R D+LK+I LGA Sbjct: 431 PPPIEVLAELMPILREKGL------------ADKFEVYIDGGVRRATDVLKAICLGAKGV 478 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 G+ PFL DA V AI+ L+ E +++M LLG +++EL + Sbjct: 479 GIGRPFLYAMTGYGDAGVNKAIQLLKDEMVMNMRLLGVNKLEELNES 525 >gi|255728825|ref|XP_002549338.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133654|gb|EER33210.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 584 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 120/344 (34%), Gaps = 70/344 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + + + + EVD S LG K+SFP+ I++ G K++ R Sbjct: 235 NTASYQRIFFKPKVM--VDVTEVDISTTMLGTKVSFPVYITATALGKLGHPDGEKVLTRS 292 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 I +A + V + + F+L A + + Sbjct: 293 ADKQDIIQMIPTLASCSFDEIVDAATDKQTQWFQLYVNADREI---------------TK 337 Query: 136 KAHQAVHVLGADGLFLHLNPLQ--------------EIIQPNGNTNFAD----------- 170 K Q G GLF+ ++ Q ++ G+ AD Sbjct: 338 KIIQHAEKRGIKGLFITVDAPQLGRREKDMKSKSINDLSHVQGDDESADRSQGAARAISS 397 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + S +P++LK V D L + G + ++ GG Sbjct: 398 FIDTSLSWKDLEWFKSVTKMPIILKGVQR---VDDAVLAAEHGCQGVVLSNHGGRQLEYS 454 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ +++ V ++ G+ + + GG+R D+LK+I LGA Sbjct: 455 PPPIEVLAELMPVLREKGL------------ADNFEVYVDGGIRRATDVLKAICLGAKGV 502 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL DA V AI+ L+ E I+ M LLG + +L Sbjct: 503 GIGRPFLYAMSTYGDAGVTKAIQLLKDEMIMDMRLLGVTSLDQL 546 >gi|255728821|ref|XP_002549336.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133652|gb|EER33208.1| cytochrome b2, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 585 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 120/344 (34%), Gaps = 70/344 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + + + + EVD S LG K+SFP+ I++ G K++ R Sbjct: 236 NTASYQRIFFKPKVM--VDVTEVDISTTMLGTKVSFPVYITATALGKLGHPDGEKVLTRS 293 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 I +A + V + + F+L A + + Sbjct: 294 ADKQDIIQMIPTLASCSFDEIVDAATDKQTQWFQLYVNADREI---------------TK 338 Query: 136 KAHQAVHVLGADGLFLHLNPLQ--------------EIIQPNGNTNFAD----------- 170 K Q G GLF+ ++ Q ++ G+ AD Sbjct: 339 KIIQHAEKRGIKGLFITVDAPQLGRREKDMKSKSINDLSHVQGDDESADRSQGAARAISS 398 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + S +P++LK V D L + G + ++ GG Sbjct: 399 FIDTSLSWKDLEWFKSVTKMPIILKGVQR---VDDAVLAAEHGCQGVVLSNHGGRQLEYS 455 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ +++ V ++ G+ + + GG+R D+LK+I LGA Sbjct: 456 PPPIEVLAELMPVLREKGL------------ADNFEVYVDGGIRRATDVLKAICLGAKGV 503 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL DA V AI+ L+ E I+ M LLG + +L Sbjct: 504 GIGRPFLYAMSTYGDAGVTKAIQLLKDEMIMDMRLLGVTSLDQL 547 >gi|238878264|gb|EEQ41902.1| cytochrome b2, mitochondrial precursor [Candida albicans WO-1] Length = 559 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 120/347 (34%), Gaps = 70/347 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + R + I E+D S LG K+S P I++ G K++ R Sbjct: 210 NTGSYQRIFFKPRVM--IDVTEIDTSTTMLGTKVSVPFYITATALGKLGHPDGEKVLTRG 267 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 + + +A + V + N + F+L V + + + Sbjct: 268 AQKHDLIQMIPTLASCSFDEIVDEAKPNQTQWFQL--------------YVNSDREITKK 313 Query: 136 KAHQAVHVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD--------- 170 A G GLF+ ++ Q +Q + Sbjct: 314 IVQHA-EARGMKGLFITVDAPQLGRREKDMKTKSIVDLSFVQGEDDEADRSQGSARAISS 372 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + S +P++LK V D + + G ++ GG Sbjct: 373 FIDTSLSWKDLKWFKSITKMPIILKGVQR---VEDAIIAAEHGCAGVVLSNHGGRQLEFS 429 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ +++ + ++ G+ + + GG+R DILK++ LGA Sbjct: 430 PPPIEVLAELMPILREKGL------------ADNFEVYIDGGVRRATDILKAVCLGAKGV 477 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 G+ PFL DA V AI+ L+ E I++M LLG +++EL + Sbjct: 478 GIGRPFLYAMSGYGDAGVNKAIQLLKDEMIMNMRLLGVNKLEELNES 524 >gi|68467313|ref|XP_722318.1| hypothetical protein CaO19.12467 [Candida albicans SC5314] gi|68467542|ref|XP_722204.1| hypothetical protein CaO19.5000 [Candida albicans SC5314] gi|46444160|gb|EAL03437.1| hypothetical protein CaO19.5000 [Candida albicans SC5314] gi|46444285|gb|EAL03561.1| hypothetical protein CaO19.12467 [Candida albicans SC5314] Length = 560 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 119/344 (34%), Gaps = 70/344 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + R + I E+D S LG K+S P I++ G K++ R Sbjct: 211 NTGSYQRIFFKPRVM--IDVTEIDTSTTMLGTKVSVPFYITATALGKLGHPDGEKVLTRG 268 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 + + +A + V + N + F+L V + + + Sbjct: 269 AQKHDLIQMIPTLASCSFDEIVDEAKPNQTQWFQL--------------YVNSDREITKK 314 Query: 136 KAHQAVHVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD--------- 170 A G GLF+ ++ Q +Q + Sbjct: 315 IVQHA-EARGMKGLFITVDAPQLGRREKDMKTKSIVDLSFVQGEDDEADRSQGSARAISS 373 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + S +P++LK V D + + G ++ GG Sbjct: 374 FIDTSLSWKDLKWFKSITKMPIILKGVQR---VEDAIIAAEHGCAGVVLSNHGGRQLEFS 430 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ +++ + ++ G+ + + GG+R DILK++ LGA Sbjct: 431 PPPIEVLAELMPILREKGL------------ADNFEVYIDGGVRRATDILKAVCLGAKGV 478 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL DA V AI+ L+ E I++M LLG +++EL Sbjct: 479 GIGRPFLYAMSGYGDAGVNKAIQLLKDEMIMNMRLLGVNKLEEL 522 >gi|164688554|ref|ZP_02212582.1| hypothetical protein CLOBAR_02199 [Clostridium bartlettii DSM 16795] gi|164602967|gb|EDQ96432.1| hypothetical protein CLOBAR_02199 [Clostridium bartlettii DSM 16795] Length = 339 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 112/324 (34%), Gaps = 50/324 (15%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N K + + R L + SVE GKK+ P+ + ++G M + Sbjct: 44 AFTENMKSLEKVKINMRVLH--DVKNPNTSVEMFGKKMKAPIFAAPVSGTTLNMGGKYTE 101 Query: 78 NLAIA-----AEKTKV-AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI-------SNLG 124 I+ K + M + F N L++ + + + Sbjct: 102 KEYISWVIEGCLKAGIYPMVGDTAIETFLTDNLE---VLKEKNADGIAFIKPWENDAIIS 158 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 ++L D GV V G L LH ++P KI L + + Sbjct: 159 KMKLAEDAGVFALGVDVDACGLVTLSLHGK----NVEPKT-------LDKIKELKQSTKL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P +LK + ++ + L ++G+ ++ GG D+ I Sbjct: 208 PFILKGL---MTVDEAILAAEAGVDAIVVSNHGGRVLDCTPGAADVLPQI---------- 254 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 A+ + + +A GG+R GVD+LK I LGA + PF+ + + V Sbjct: 255 -------AKAVKGKTKILADGGVRTGVDVLKLIALGADGVLIGRPFVTASFGGGSEGVEL 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 + + E +M L G + ++ Sbjct: 308 YVNKIISELEATMRLTGCATIADI 331 >gi|212545306|ref|XP_002152807.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] gi|210065776|gb|EEA19870.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] Length = 497 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 123/354 (34%), Gaps = 71/354 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L + ++VD S LG K S P +++ G Sbjct: 135 ADDEITMRENHTAFHKVWFRPRVL--VDVEKVDFSTTMLGSKTSVPFYVTATALGKLGHP 192 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R N + +A + V + ++ +L + Sbjct: 193 EGEVVLTRAAHNHEVIQMIPTLASCSFDEIVDARKGDQVQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 +K + G LF+ ++ Q + F+D Sbjct: 245 -------TKKIVEHAEKRGCKALFITVDAPQLGRREKDMRVKFSDTGSNVQASGGDSIDR 297 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P+LLK V C D+ +++G++ ++ Sbjct: 298 SQGAARAISSFIDPSLSWKDIPWFKSITKMPILLKGVQC---VEDVLRAVEAGVQGVVLS 354 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ + ++ R + N+ + GG+R G DI+ Sbjct: 355 NHGGRQLDFAPSAIEILAEVMPILRE------------RGWENKIEIFIDGGIRRGTDII 402 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA+ G+ PFL + + V A + L+ E ++M L+G V +L Sbjct: 403 KALCLGATGVGIGRPFLYAMSTYGQEGVERAFQLLKDELEMNMRLIGAATVADL 456 >gi|238855319|ref|ZP_04645635.1| hydroxyacid oxidase [Lactobacillus jensenii 269-3] gi|260665198|ref|ZP_05866047.1| L-lactate oxidase [Lactobacillus jensenii SJ-7A-US] gi|282931572|ref|ZP_06337067.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] gi|238832061|gb|EEQ24382.1| hydroxyacid oxidase [Lactobacillus jensenii 269-3] gi|260560935|gb|EEX26910.1| L-lactate oxidase [Lactobacillus jensenii SJ-7A-US] gi|281304305|gb|EFA96412.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] Length = 408 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 121/345 (35%), Gaps = 69/345 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ R+L + D +F+G L P++I + I A Sbjct: 54 NTAAFNHFQIVPRSL--TNMDNPSTETQFMGMDLKTPIMICPIA------CHGIAHKDAE 105 Query: 82 AAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A A G+ +++ + +P + + ++DF + Sbjct: 106 VATAQG-AKAAGALFSSSTYANRSVEDIATATGDSPKFFQL----YLSKDWDFN-KMVFD 159 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNF--------------------------ADLS 172 AV G G+ L ++ L + N TNF A+ + Sbjct: 160 AVKSAGYKGIMLTVDALVSGYREANLRTNFTFPVPLDFFTRYVGAEGEGMSVAQMYANSA 219 Query: 173 SKI-----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 KI A + +P+ +K V +++ D + + +G ++ GG + Sbjct: 220 QKIGPADVAKIKEMSGLPVFVKGV---MNAEDAYMAIGAGADGIVVSNHGGREIDTAPAT 276 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ +I I G+R G + K++ LGA L G+ Sbjct: 277 IDMLPEIAA-----------------AVNGRVPIILDSGVRRGSHVFKALALGADLVGIG 319 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 PFL A+ + V + I + EF + M L G K V+++ Sbjct: 320 RPFLYGLALGGAKGVESVINQINNEFKILMQLTGCKTVEDVKHAD 364 >gi|121714635|ref|XP_001274928.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] gi|119403082|gb|EAW13502.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] Length = 500 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 125/362 (34%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L + + VD S LG K+S P +++ G Sbjct: 137 ADDEITLRENHNAFHKIWFRPRVL--VDVENVDFSTTMLGTKVSMPFYVTATALGKLGNP 194 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + +A + V + ++ +L V Sbjct: 195 EGEVVLTRAAHKHNVVQMIPTLASCSFDEIVDARQGDQVQWLQL--------------YV 240 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 + + + A G GLF+ ++ Q + F+D Sbjct: 241 NKDREITKRIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFSDAGSSVQASSGDDVDR 299 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V C D+ +++G+ ++ Sbjct: 300 SQGAARAISSFIDPSLSWKDIPWFKSITKMPIILKGVQC---VEDVLRAVEAGVDGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ ++ R + + + GG+R DIL Sbjct: 357 NHGGRQLEFARSAIEVLAEVMPALRE------------RGWEKKIEVYVDGGVRRATDIL 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ LR E ++M L+G + ++EL N +L Sbjct: 405 KALCLGAQGVGIGRPFLYAMSAYGQPGVERAMQLLRDEMEMNMRLIGARTIEEL--NPSL 462 Query: 334 IR 335 I Sbjct: 463 ID 464 >gi|302883003|ref|XP_003040406.1| hypothetical protein NECHADRAFT_44658 [Nectria haematococca mpVI 77-13-4] gi|256721285|gb|EEU34693.1| hypothetical protein NECHADRAFT_44658 [Nectria haematococca mpVI 77-13-4] Length = 462 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 121/336 (36%), Gaps = 42/336 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N F + L ++ + VD S LG K + P+ +S+ + K+ Sbjct: 133 DEFTLKENITAFQKIRFRPKVL--VNVEHVDISTTLLGTKTAIPIYVSATA--SAKLGHP 188 Query: 75 INRN-LAIAAEKTKVAMAVGSQRV-------MFSDHNAIKSFEL-----RQYAPHTVLIS 121 L A+ + + +A + F++ R A V + Sbjct: 189 EGEVVLTRASNNHGIVQMIPLYSSCPIEEVTDARAPDATQWFQIYVKKDRNAARKAVEKA 248 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-------PLQEIIQPNGNTNFADLSS 173 LG L VL + N P E+ P+ TN + Sbjct: 249 ERLGCKALCITVDNPHLGSRERVLRSHHEGDTGNDDEFEDAPATEL-DPSLTTNASLAWE 307 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I S +P+++K V D+ +K G+ ++ GG E+ ++ ++ Sbjct: 308 DIPWFQSITKMPIVIKGVQR---VEDVLTAVKYGVSAVILSNHGGRQLEYAEAPIEVLAE 364 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + + ++ G+ + + GG+R G D+LK++ LGA G+ PFL Sbjct: 365 VMPILRERGLD------------KKIEVYMDGGVRRGTDVLKALCLGARGVGIGRPFLYA 412 Query: 294 -AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A V A+ + E +M L+G + EL+ Sbjct: 413 MAGYGQKGVEKAMRIFKDELERNMRLIGCNSIDELH 448 >gi|256851661|ref|ZP_05557049.1| L-lactate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260661622|ref|ZP_05862534.1| L-lactate oxidase [Lactobacillus jensenii 115-3-CHN] gi|282933659|ref|ZP_06339019.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] gi|256615619|gb|EEU20808.1| L-lactate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260547679|gb|EEX23657.1| L-lactate oxidase [Lactobacillus jensenii 115-3-CHN] gi|281302216|gb|EFA94458.1| hydroxyacid oxidase [Lactobacillus jensenii 208-1] Length = 408 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 123/345 (35%), Gaps = 69/345 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ R+L + D + +F+G L P++I + I A Sbjct: 54 NTTAFNHFQIVPRSL--TNMDSPSTATQFMGMDLKTPIMICPIA------CHGIAHKDAE 105 Query: 82 AAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A A G+ +++ + +P + + ++DF + Sbjct: 106 VATAQG-AKAAGALFSSSTYANKSVEDIAAATGDSPKFFQL----YLSKDWDFN-KMVFD 159 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNF--------------------------ADLS 172 AV G G+ L ++ L + N TNF A+ + Sbjct: 160 AVKSAGYKGIMLTVDALVSGYREANLRTNFTFPVPLDFFTRYVGAEGEGMSVAQMYANSA 219 Query: 173 SKI-----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 KI A + +P+ +K + +++ D + + +G ++ GG + Sbjct: 220 QKIGPADVAKIKEMSGLPVFVKGI---MNAEDAYMAIGAGADGIVVSNHGGREIDTAPAT 276 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ +I T I G+R G + K++ LGA L G+ Sbjct: 277 IDMLPEI----------TA-------AVNGRVPIILDSGVRRGSHVFKALALGADLVGIG 319 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 PFL A+ + V + I + EF + M L G K V+++ Sbjct: 320 RPFLYGLALGGAKGVESVINQINNEFKILMQLTGCKTVEDVKHAD 364 >gi|51247470|pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound gi|51247471|pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound gi|51247472|pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound gi|51247473|pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound Length = 511 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 115/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ TG + Sbjct: 148 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSA-TG----LC 200 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTAASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 260 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 261 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 319 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 376 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 377 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 424 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 425 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 >gi|297205269|ref|ZP_06922665.1| L-lactate oxidase FMN-binding domain protein [Lactobacillus jensenii JV-V16] gi|297149847|gb|EFH30144.1| L-lactate oxidase FMN-binding domain protein [Lactobacillus jensenii JV-V16] Length = 408 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 123/345 (35%), Gaps = 69/345 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N F+ + ++ R+L + D + +F+G L P++I + I A Sbjct: 54 NTTAFNHFQIVPRSL--TNMDSPSTATQFMGMDLKTPIMICPIA------CHGIAHKDAE 105 Query: 82 AAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A A G+ +++ + +P + + ++DF + Sbjct: 106 VATAQG-AKAAGALFSSSTYANKSVEDIAAATGDSPKFFQL----YLSKDWDFN-KMVFD 159 Query: 140 AVHVLGADGLFLHLNPL-QEIIQPNGNTNF--------------------------ADLS 172 AV G G+ L ++ L + N TNF A+ + Sbjct: 160 AVKSAGYKGIMLTVDALVSGYREANLRTNFTFPVPLDFFTRYVGAEGEGMSVAQMYANSA 219 Query: 173 SKI-----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 KI A + +P+ +K + +++ D + + +G ++ GG + Sbjct: 220 QKIGPADVAKIKEMSGLPVFVKGI---MNAEDAYMAIGAGADGIVVSNHGGREIDTAPAT 276 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ +I T I G+R G + K++ LGA L G+ Sbjct: 277 IDMLPEI----------TA-------AVNGRVPIILDSGVRRGSHVFKALALGADLVGIG 319 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 PFL A+ + V + I + EF + M L G K V+++ Sbjct: 320 RPFLYGLALGGAKGVESVINQINNEFKILMQLTGCKTVEDVKHAD 364 >gi|227889188|ref|ZP_04006993.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus johnsonii ATCC 33200] gi|227850417|gb|EEJ60503.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus johnsonii ATCC 33200] Length = 409 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 126/353 (35%), Gaps = 67/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F+ + ++ RAL + + + EFLGK P++I + G Sbjct: 45 AENEWTWRNNTQAFNHFQIVPRALTGMQ--NPELNTEFLGKS---PVMICPIACHGIANA 99 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ A AM+ + + + +A+ +P + + + N+D Sbjct: 100 EAEIDTAKGAKAAGALFAMSTYANKSVQEVQSAVGD------SPRFMQL----YLSKNWD 149 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFA---------DL---------- 171 F ++V G G FL ++ L + N TNF + Sbjct: 150 FNKMVIEESVKA-GFTGFFLTVDALVSGYREANLRTNFTYPVPLAFFNEWNGGKGEGQSV 208 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + DVP+++K V C D L + +G ++ GG Sbjct: 209 AQMYASSAQNIGPDDIHKIKKIADVPVIVKGVECA---EDAMLAVGAGADGIVVSNHGGR 265 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D+ +I R + I GG+R G + K++ L Sbjct: 266 EVDGAPATIDVLPEIAKA--------------VRSSNHRVPVILDGGVRRGSHVFKALAL 311 Query: 280 GASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 GA L G+ PFL + + V + IE L KE ++ M L K ++++ Sbjct: 312 GADLVGIGRPFLYGLTLGGAQGVQSVIEQLNKELLIDMQLTVCKTIEDIKHAK 364 >gi|51247468|pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate gi|51247469|pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate Length = 511 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 148 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 200 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTAASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 260 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 261 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 319 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 376 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 377 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 424 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 425 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 >gi|255712885|ref|XP_002552725.1| KLTH0C11770p [Lachancea thermotolerans] gi|238934104|emb|CAR22287.1| KLTH0C11770p [Lachancea thermotolerans] Length = 618 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 121/340 (35%), Gaps = 44/340 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT----GGNNK 70 + N + R L ++ VD S E LG K+S P +S+ G + Sbjct: 258 DEFTYRENHAAYHRIFFKPRVL--VNVKNVDISTEMLGFKVSVPFYVSATALVKLGNPEE 315 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP---HTVLISNLGAVQ 127 + I R K ++ + + A S E Q+ +T + ++ Sbjct: 316 GEKDIARGCGQGEHKCPQMISTFASCSLQEIVEAAPSKEQIQWLQLYVNTNRSATESLLR 375 Query: 128 LNYDFGVQKAHQAVHVL-------GADGLFLHLNPLQEIIQPNGNT------------NF 168 G++ V F+ N Q + + Sbjct: 376 EAETLGLRAIFLTVDTPASGRREKDMKLKFISSNAPQNARAAKNKSSRGASQALASFIDP 435 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +A L + ++P+++K V C D+ + G+ I+ GG + Sbjct: 436 TLTWEDVAELKTKTNLPVVIKGVQC---VEDVLKAAEIGVDGVVISNHGGRQLDFSRAPL 492 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ +D + ++ + ++ + GG+R G DILK++ LGA GL Sbjct: 493 EVLADTMPILKE------------KHLDDKLEVFIDGGVRRGTDILKALCLGAKGVGLGR 540 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL + D V AI L +E SM LLG K ++EL Sbjct: 541 PFLYANSCYGKDGVEKAISMLAEELQCSMRLLGAKSIKEL 580 >gi|328860321|gb|EGG09427.1| hypothetical protein MELLADRAFT_47483 [Melampsora larici-populina 98AG31] Length = 493 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 118/350 (33%), Gaps = 67/350 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ F R L + ++D S LG K S P+ I++ G ++ Sbjct: 136 DEISMRENRLAFQRIWFRPRIL--RNVSKIDFSTNLLGSKTSIPIYITATALGKLGHVDG 193 Query: 75 INRNLAIAAEKTKVAMAVGSQRV----MFSDHN-AIKSFELRQYAPHTVLISNLGAVQLN 129 +NL AAE V + + S+ + F+L A Sbjct: 194 -EKNLTRAAEIEDVIQMIPTLSSVPFLELSNPKHQSQWFQLYVNADRV------------ 240 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT----------------------- 166 + + G LF+ ++ Q + Sbjct: 241 ---KTEALVKRAEANGIKALFITVDAPQLGRREKDMRLKFETLGSDLQENESIDKSQGAT 297 Query: 167 -------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + I S +P++LK V + D L + G++ ++ GG Sbjct: 298 RAISSFIDSSLCWDDIPWFKSITKLPIILKGVQ---TWEDAVLAYEYGLQGVVLSNHGGR 354 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 S ++ ++ F+ I N+ + GG+R D+LK++ L Sbjct: 355 QLDYARSGIEVLEEVVQEFKKRSI----------YDLNKFEIYVDGGIRRSSDVLKALCL 404 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA G+ PFL + VV AI+ L+ E + M L+G + +L Sbjct: 405 GAKAVGIGRPFLYAYSTYGVPGVVRAIQILKDELEMDMRLIGAPTLDDLR 454 >gi|171690308|ref|XP_001910079.1| hypothetical protein [Podospora anserina S mat+] gi|170945102|emb|CAP71213.1| unnamed protein product [Podospora anserina S mat+] Length = 498 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 121/354 (34%), Gaps = 71/354 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F + L ++ ++VD S LG K+ P +++ G + Sbjct: 137 ADDEITLRENQTAFQRIWFRPKIL--VNVEKVDFSTTMLGTKVDIPFYVTATALGKLGHV 194 Query: 73 ER---INRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 E + R A +A + + +D + ++ +L + Sbjct: 195 EGEVVLTRASARHNVVQMIPTLASCSFDEIMDAADASQVQWLQLYVNKDRAI-------- 246 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 ++ + G GLF+ ++ Q + F D Sbjct: 247 -------TKRIVEHAEKRGCKGLFITVDAPQLGRREKDMRLKFTDEGSNVQKGSGEKTDN 299 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V D+ ++ G ++ Sbjct: 300 SQGAARAISSFIDPGLCWDDIPWFRSVTKMPIVLKGVQR---VEDVLRAVEVGCAGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ ++ V + G+ + + GG+R DI+ Sbjct: 357 NHGGRQLDFARSGIEVLAETMPVLKKMGL------------EKKIEVYVDGGVRRATDII 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA G+ PFL + + V A++ L+ E ++M L+G + ++EL Sbjct: 405 KALCLGAKGVGIGRPFLYAMSAYGQEGVERAMQLLKDEMEMNMRLIGARTIEEL 458 >gi|308198269|ref|XP_001386948.2| cytochrome b2, mitochondrial precursor [Scheffersomyces stipitis CBS 6054] gi|149388938|gb|EAZ62925.2| cytochrome b2, mitochondrial precursor [Pichia stipitis CBS 6054] Length = 490 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 123/362 (33%), Gaps = 70/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N + R L + +D S LG K+S P I++ G Sbjct: 135 CDDEITLRENHASYQRVFFKPRVL--VDVTNIDLSTTMLGTKVSSPFYITATALGRLGHD 192 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R I +A + V + + +L + N+ Sbjct: 193 DGECVLTRSAAKQDIIQMIPTLASCSFDEIVDAATDKQTQWLQL-YVNKDREICENI--- 248 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--------------EIIQPNGNTNFADL- 171 + G GLF+ ++ Q ++ G+ AD Sbjct: 249 -----------VRHAEKRGIKGLFITVDAPQLGRREKDMRSKNIEDLSHVQGDDEEADRT 297 Query: 172 ----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 I S +P++LK + + D L ++ G+ ++ Sbjct: 298 QGAARAISSFIDTSLNWKDIKWFRSITKMPIILKGIQ---TVEDSLLAVEHGVDGIVLSN 354 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + ++ ++ V + G+ ++ + GG+R D+LK Sbjct: 355 HGGRQLEFSKPPLEVLIELMPVLRSKGL------------QDKLEIYLDGGVRRATDVLK 402 Query: 276 SIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +I LGA G+ PFL DA V AI+ L+ E I++M LLG + +L + + Sbjct: 403 AICLGAKGVGIGRPFLYAMSTYGDAGVYKAIQILKDEMIMNMRLLGVTSIDQLNESYVDV 462 Query: 335 RH 336 R+ Sbjct: 463 RN 464 >gi|323303647|gb|EGA57435.1| Cyb2p [Saccharomyces cerevisiae FostersB] gi|323336183|gb|EGA77454.1| Cyb2p [Saccharomyces cerevisiae Vin13] Length = 424 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 61 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 113 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 114 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 173 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 174 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 232 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 233 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 289 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 290 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 337 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 338 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 387 >gi|640259|pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia Coli Recombinant Saccharomyces Cerevisiae Flavocytochrome B2- Sulphite Complex gi|640260|pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia Coli Recombinant Saccharomyces Cerevisiae Flavocytochrome B2- Sulphite Complex gi|323347079|gb|EGA81354.1| Cyb2p [Saccharomyces cerevisiae Lalvin QA23] Length = 506 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 143 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 195 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 196 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 255 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 256 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 314 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 315 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 371 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 372 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 419 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 420 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 469 >gi|1065320|pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1065321|pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1127122|pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate gi|1127123|pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate Length = 511 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 148 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 200 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 260 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 261 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 319 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 376 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 377 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 424 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 425 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 >gi|229909|pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms Resolution gi|229910|pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms Resolution gi|20150736|pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme gi|20150737|pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme Length = 511 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 148 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 200 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 260 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 261 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 319 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 376 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 377 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 424 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 425 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 >gi|6323587|ref|NP_013658.1| Cyb2p [Saccharomyces cerevisiae S288c] gi|117804|sp|P00175|CYB2_YEAST RecName: Full=Cytochrome b2, mitochondrial; AltName: Full=L-lactate dehydrogenase [Cytochrome]; AltName: Full=L-lactate ferricytochrome C oxidoreductase; Short=L-LCR; Flags: Precursor gi|3633|emb|CAA26959.1| unnamed protein product [Saccharomyces cerevisiae] gi|577142|emb|CAA86721.1| cytochrome b2 precursor [Saccharomyces cerevisiae] gi|151946111|gb|EDN64342.1| L-lactate cytochrome c oxidoreductase [Saccharomyces cerevisiae YJM789] gi|190408190|gb|EDV11455.1| L-lactate cytochrome c oxidoreductase [Saccharomyces cerevisiae RM11-1a] gi|256273065|gb|EEU08022.1| Cyb2p [Saccharomyces cerevisiae JAY291] gi|259148524|emb|CAY81769.1| Cyb2p [Saccharomyces cerevisiae EC1118] gi|285813949|tpg|DAA09844.1| TPA: Cyb2p [Saccharomyces cerevisiae S288c] gi|323352969|gb|EGA85269.1| Cyb2p [Saccharomyces cerevisiae VL3] Length = 591 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 228 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 280 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 281 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 340 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 341 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 399 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 400 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 456 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 457 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 504 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 505 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 554 >gi|5107652|pdb|1QCW|A Chain A, Flavocytochrome B2, Arg289lys Mutant gi|5107653|pdb|1QCW|B Chain B, Flavocytochrome B2, Arg289lys Mutant Length = 410 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 47 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 99 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 100 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 159 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 160 ITDDLVKNVEKLGVKALFVTVDAPS-LGQKEKDMKLKFSNTKAGFKAMKKTNVEESQGAS 218 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 219 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 275 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 276 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 323 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 324 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 373 >gi|260943424|ref|XP_002616010.1| hypothetical protein CLUG_03251 [Clavispora lusitaniae ATCC 42720] gi|238849659|gb|EEQ39123.1| hypothetical protein CLUG_03251 [Clavispora lusitaniae ATCC 42720] Length = 557 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 122/366 (33%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N + + L + +D S LG S P I++ G Sbjct: 201 ADDEIALRNNHLAYQKVFFKPKVL--VDVSSIDLSTTMLGTATSVPFYITATALGKLGHP 258 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 K++ R + +A + V +D + F+L V Sbjct: 259 DGEKVLTRAAARQDVIQMIPTLASCSFDEIVDQADGKQTQWFQL--------------YV 304 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD 170 + A G GLF+ ++ Q +Q +G Sbjct: 305 NSDRQVTEDLVRHA-EKRGVKGLFITVDAPQLGRREKDMRSKNVEDLSHVQGDGEDVDRS 363 Query: 171 L---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + S +P++LK V S D + G+ ++ Sbjct: 364 HGAARAISSFIDTSLNWDDLKWFRSITKMPIVLKGVQ---SVEDTLKAIDFGVDGVVLSN 420 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG +++ ++ +++ + R + + GG+R G D+LK Sbjct: 421 HGGRQLDSVKAPIEILAELNP------------ILKKRGLLGKLEIFIDGGVRRGSDVLK 468 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNT 331 +I LGA G+ PFL + D V A++ L+ E +++M LLG + L Y++T Sbjct: 469 AIALGAKGVGIGRPFLYAMSTYGDDGVFKAVQVLKDEMVMNMRLLGAPSIAHLDDSYVDT 528 Query: 332 ALIRHQ 337 A + Q Sbjct: 529 ADLHRQ 534 >gi|159122277|gb|EDP47399.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus A1163] Length = 500 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 130/365 (35%), Gaps = 79/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L ++ + VD S LG K+S P +++ G N Sbjct: 137 ADDEITMRENHNAFHKIWFRPRVL--VNVENVDFSTTMLGTKVSVPFYVTATALGKLGNP 194 Query: 71 MIERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 E + L AA K +A + V + ++ +L Sbjct: 195 EGEVV---LTRAAYKHNVIQMIPTLASCSFDEIVDAKQGDQVQWLQL------------- 238 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL----------- 171 V + + + A G GLF+ ++ Q + F+D+ Sbjct: 239 -YVNKDRNITKRIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFSDVGASVQASGGDE 296 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I S +P++LK V C D+ ++ G+ Sbjct: 297 VDRSQGAARAISSFIDPSLSWKDIPWFQSITKMPIILKGVQC---VEDVLRAVEMGVDGV 353 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG S ++ +++ ++ R + N+ + GG+R Sbjct: 354 VLSNHGGRQLEFAPSAIEVLAEVMPALRE------------RGWENKIEVYIDGGVRRAT 401 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK++ LGA G+ PFL + V A++ L+ E ++M L+G +++EL N Sbjct: 402 DILKALCLGAKGVGIGRPFLFAMSAYGQPGVERAMQLLKDEMEMNMRLIGVSKIEEL--N 459 Query: 331 TALIR 335 +LI Sbjct: 460 PSLID 464 >gi|20150738|pdb|1KBJ|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme gi|20150739|pdb|1KBJ|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding Domain Of Baker's Yeast Flavocytochrome B2: Comparison With The Intact Wild-Type Enzyme Length = 412 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 49 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 101 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 102 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 161 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 162 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 220 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ GG Sbjct: 221 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGR 277 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 278 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 325 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 326 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 375 >gi|238488625|ref|XP_002375550.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220697938|gb|EED54278.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 800 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 54/349 (15%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK +D L R L + ++V+ LG + PL +S KM+ + L Sbjct: 455 DANKSMYDRILLRPRVL--RNVNKVNTQTTILGCETGLPLFVSPAA--MAKMVHP-DGEL 509 Query: 80 AIA--AEKTKVAMAVGS-QRVMFSD--------HNAIKSFELRQYAPHTVLISN-----L 123 AIA K V + + SD + + R A L+ + Sbjct: 510 AIARGCAKYGVGQCISTNASYTVSDITACAPGHPFFFQLYINRDRAASEQLLRRVEKSGI 569 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGL-FLHLNPL---QEIIQPNGN---------TNFAD 170 AV L D V +A +GAD ++ P+ Q + G+ + + Sbjct: 570 KAVFLTVDAPVAGKREADERVGADASEIIYTAPMTGAQGVGDAKGSALGRTMGRYIDASF 629 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L + +P++LK + ++ D + + G+ ++ GG S S + Sbjct: 630 TWEDLKWLRRSTSLPIVLKGIQ---TAEDALMATEHGVDGIVVSNHGGRSVDTSTSSIAV 686 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +I + GG+R G DI K+I LGA G+ F Sbjct: 687 LMEIRQC--------------CPQVFEHLEVFVDGGIRRGTDIFKAICLGAKAVGMGRQF 732 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L + V IE ++ E +M LLG + + + LNT + H Sbjct: 733 LYSLTYGQEGVERLIEIMKDELETTMKLLGITDLSQAHPGLLNTLDVDH 781 >gi|119487411|ref|XP_001262498.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] gi|119410655|gb|EAW20601.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] Length = 500 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 130/365 (35%), Gaps = 79/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L ++ + VD S LG K+S P +++ G N Sbjct: 137 ADDEITMRENHNAFHKIWFRPRVL--VNVENVDFSTTMLGTKVSVPFYVTATALGKLGNP 194 Query: 71 MIERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 E + L AA K +A + V + ++ +L Sbjct: 195 EGEVV---LTRAAHKHNVIQMIPTLASCSFDEIVDAKQGDQVQWLQL------------- 238 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL----------- 171 V + + + A G GLF+ ++ Q + F+D+ Sbjct: 239 -YVNKDRNITKRIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFSDVGASVQASGGDE 296 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I S +P++LK V C D+ ++ G+ Sbjct: 297 VDRSQGAARAISSFIDPSLSWKDIPWFKSITKMPIILKGVQC---VEDVLRAVEVGVDGV 353 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG S ++ +++ ++ R + N+ + GG+R Sbjct: 354 VLSNHGGRQLEFARSAIEVLAEVMPALRE------------RGWENKIEVYIDGGVRRAT 401 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK++ LGA G+ PFL + V A++ L+ E ++M L+G +++EL N Sbjct: 402 DILKALCLGAKGVGIGRPFLFAMSTYGQPGVERAMQLLKDEMEMNMRLIGVSKIEEL--N 459 Query: 331 TALIR 335 +LI Sbjct: 460 PSLID 464 >gi|70981939|ref|XP_746498.1| mitochondrial cytochrome b2 [Aspergillus fumigatus Af293] gi|66844121|gb|EAL84460.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus Af293] Length = 500 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 130/365 (35%), Gaps = 79/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L ++ + VD S LG K+S P +++ G N Sbjct: 137 ADDEITMRENHNAFHKIWFRPRVL--VNVENVDFSTTMLGTKVSVPFYVTATALGKLGNP 194 Query: 71 MIERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 E + L AA K +A + V + ++ +L Sbjct: 195 EGEVV---LTRAAYKHNVIQMIPTLASCSFDEIVDAKQGDQVQWLQL------------- 238 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL----------- 171 V + + + A G GLF+ ++ Q + F+D+ Sbjct: 239 -YVNKDRNITKRIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFSDVGASVQASGGDE 296 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I S +P++LK V C D+ ++ G+ Sbjct: 297 VDRSQGAARAISSFIDPSLSWKDIPWFQSITKMPIILKGVQC---VEDVLRAVEMGVDGV 353 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG S ++ +++ ++ R + N+ + GG+R Sbjct: 354 VLSNHGGRQLEFARSAIEVLAEVMPALRE------------RGWENKIEVYIDGGVRRAT 401 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK++ LGA G+ PFL + V A++ L+ E ++M L+G +++EL N Sbjct: 402 DILKALCLGAKGVGIGRPFLFAMSAYGQPGVERAMQLLKDEMEMNMRLIGVSKIEEL--N 459 Query: 331 TALIR 335 +LI Sbjct: 460 PSLID 464 >gi|5262950|emb|CAB45871.1| cytochrome b2 [Kluyveromyces lactis] Length = 585 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 126/348 (36%), Gaps = 56/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNN 69 + N + R L ++ EVD S LG+K+ P +S+ GN Sbjct: 226 ADDEVTHRENHAAYHRIFFKPRIL--VNVKEVDTSTTMLGEKVGVPFYVSATALCKLGNP 283 Query: 70 KMIER-INRNLAI-----AAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTV---L 119 K E+ I R + +A + V + I+ F+L + + L Sbjct: 284 KEGEKDIARGCGESDVKPVQMISTLASCSLQEIVEAAPSKEQIQWFQLYVNSDRKITEDL 343 Query: 120 ISN-----LGAVQLNYD---FGVQKAHQAVHVLGADGLFLHLN-----------PLQEII 160 I N L A+ + D G ++ V ++G L I Sbjct: 344 IKNVEKLGLKAIFVTVDAPSLGNREKDAKVKFTNSNGAKAMEKSKVKESKGASRALSSFI 403 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 P N I +P+++K V C D+ + G+ ++ GG Sbjct: 404 DPALN------WDDIIEFKKKTKLPIVIKGVQC---VEDVLKAAEIGVAGVVLSNHGGRQ 454 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + ++ ++ V ++ + ++ + GG+R G DILK++ LG Sbjct: 455 LDFSRAPIEVLAETMPVLRE------------KKLDDKIEIFIDGGVRRGTDILKALCLG 502 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A GL PFL + + V AIE L+ E +SM LLG + +L Sbjct: 503 AKGVGLGRPFLYSNSCYGKEGVKKAIELLKDELEMSMRLLGVTSIDQL 550 >gi|50306425|ref|XP_453186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642320|emb|CAH00282.1| KLLA0D02640p [Kluyveromyces lactis] Length = 589 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 126/348 (36%), Gaps = 56/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNN 69 + N + R L ++ EVD S LG+K+ P +S+ GN Sbjct: 227 ADDEVTHRENHAAYHRIFFKPRIL--VNVKEVDTSTTMLGEKVGVPFYVSATALCKLGNP 284 Query: 70 KMIER-INRNLAI-----AAEKTKVAMAVGSQRVMFS-DHNAIKSFELRQYAPHTV---L 119 K E+ I R + +A + V + I+ F+L + + L Sbjct: 285 KEGEKDIARGCGESDVKPVQMISTLASCSLQEIVEAAPSKEQIQWFQLYVNSDRKITEDL 344 Query: 120 ISN-----LGAVQLNYD---FGVQKAHQAVHVLGADGLFLHLN-----------PLQEII 160 I N L A+ + D G ++ V ++G L I Sbjct: 345 IKNVEKLGLKAIFVTVDAPSLGNREKDAKVKFTNSNGAKAMEKSKVKESKGASRALSSFI 404 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 P N I +P+++K V C D+ + G+ ++ GG Sbjct: 405 DPALN------WDDIIEFKKKTKLPIVIKGVQC---VEDVLKAAEIGVAGVVLSNHGGRQ 455 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + ++ ++ V ++ + ++ + GG+R G DILK++ LG Sbjct: 456 LDFSRAPIEVLAETMPVLRE------------KKLDDKIEIFIDGGVRRGTDILKALCLG 503 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A GL PFL + + V AIE L+ E +SM LLG + +L Sbjct: 504 AKGVGLGRPFLYSNSCYGKEGVKKAIELLKDELEMSMRLLGVTSIDQL 551 >gi|149239504|ref|XP_001525628.1| cytochrome b2, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146451121|gb|EDK45377.1| cytochrome b2, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 582 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 120/356 (33%), Gaps = 70/356 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N + R + + VD S LG K S P +++ G Sbjct: 223 CDDEISMRENHLAYHRVWFKPRVM--VDVTNVDFSTTMLGTKTSAPFYVTATALGKLGHP 280 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 K++ R I +A + V + + + F+L V Sbjct: 281 DGEKVLTRACDKQDIIQMIPTLASCSFDEIVDQATNKQTQWFQL--------------YV 326 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFADL------------- 171 + + + A G GLF+ ++ Q + +F DL Sbjct: 327 NADKEVCKKLVQHA-EKRGCKGLFITVDAPQLGRREKDMRTKDFEDLSHVQGGGEDTIRD 385 Query: 172 ----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + S +P++LK V C D + G + ++ Sbjct: 386 QGAARAISSFIDTSLKWDDLEWFKSITKMPIILKGVQC---VEDAVKAAQLGCQGIVLSN 442 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG ++ ++ + ++ + + + GG+R DILK Sbjct: 443 HGGRQLEFSRPPIEILIELMPILKE------------QNLDKDFEVYVDGGVRRATDILK 490 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +I LGA G+ PFL + D V+ A++ L++E ++M LLG + +L L+ Sbjct: 491 AIALGAKGVGIGRPFLYAMSTYGDDGVIRAMQILKEELEMNMRLLGVTLIDQLNLD 546 >gi|46121901|ref|XP_385504.1| hypothetical protein FG05328.1 [Gibberella zeae PH-1] Length = 502 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 120/353 (33%), Gaps = 69/353 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---N 69 + + N F + L + + +D S LG K P+ +++ G Sbjct: 134 ADDEITMRENHSAFHRIWFRPQIL--VDVENIDFSTTMLGTKTDIPVYVTATALGKLGNP 191 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + + R A +A + V + ++ +L + Sbjct: 192 EGEVVLTRAAAKHNVIQMIPTLASCSFDEIVDAKAGDQVQWLQLYVNKDRAI-------- 243 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 +K Q G GLF+ ++ Q + Sbjct: 244 -------TKKIVQHAEKRGCKGLFITVDAPQLGRREKDMRSKFTDPGSHVQEGTDTDNSQ 296 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + A IA S +P++LK V D+ + G + ++ Sbjct: 297 GAARAISTFIDPALSWKDIAWFQSITSMPIILKGVQR---VEDVLKAIDYGCQGVVLSNH 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S ++ ++ + ++ G+ N+ + GG+R G DILK+ Sbjct: 354 GGRQLEFARSAIEVLAETMPILRERGL------------ENKIEIFIDGGIRRGTDILKA 401 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + LGA G+ PFL + V+ A++ L+ E ++M L+G ++++L+ Sbjct: 402 LCLGARGVGIGRPFLYAMSTYGEAGVIRAMQLLKDELEMNMRLIGASKIEDLH 454 >gi|46115734|ref|XP_383885.1| hypothetical protein FG03709.1 [Gibberella zeae PH-1] Length = 431 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 121/338 (35%), Gaps = 44/338 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + F + + ++ + VD S FLG + S P+ IS+ + K+ + Sbjct: 100 DEFTLRENSQSFQQIRFRPKVM--VNVEHVDISTNFLGSRTSAPIYISATA--HAKIADP 155 Query: 75 INR-NLAIAAEKTKVAMAVGSQRVM-------FSDHNAIKSFEL---RQYAPHTVLISN- 122 LA A+ K + + + + + F++ + I N Sbjct: 156 EGEVTLARASNKHDIIQMIPLYSSFPLEDITKAREPDRTQWFQVYVKKDRNVTRRAIENA 215 Query: 123 -----------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + L V + Q+ D P E+ P+ N Sbjct: 216 EKHGCKALCITVDNPHLGSRERVLRLQQSEADEDGDDDEFEDLPATEL-DPSLIMNSTLS 274 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I+ S + ++LK V D+ + GI ++ GG E ++ Sbjct: 275 WDDISWFRSITKMAIVLKGVQR---VEDVVKAAECGIEAVILSNHGGRQLDYSEPPIEVL 331 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +++ ++ G+ ++ + GG+R G DILK++ LGA G+ PFL Sbjct: 332 AEVMPTLRELGL------------HDKIEVYLDGGIRRGSDILKALCLGARGVGIGRPFL 379 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A V AI + E +M LLG + +L+ Sbjct: 380 YAMAGYGQKGVEKAIRIYKDELERNMRLLGCTSMDQLH 417 >gi|296818911|ref|XP_002849777.1| cytochrome b2 [Arthroderma otae CBS 113480] gi|238840230|gb|EEQ29892.1| cytochrome b2 [Arthroderma otae CBS 113480] Length = 500 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 115/352 (32%), Gaps = 71/352 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKM 71 + + N F R L + ++V S LG +S P +++ G+ Sbjct: 138 DEMTMRENHTAFHKIWFRPRIL--VDVEQVSISTTMLGTPVSVPFYVTATALGKLGHPDG 195 Query: 72 IERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + R A +A Q V + +L V Sbjct: 196 EVCLTRASATHDVIQMIPTLASCSFDQIVDAKTPRQTQWLQL--------------YVNK 241 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT---------------------- 166 + D + A G GLF+ ++ Q + Sbjct: 242 DRDITRRIVEHA-EARGCKGLFITVDAPQLGRREKDMRSKFAEQGSNVQASTSGTVDRSQ 300 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + S +P+ LK V D+ +++GI ++ Sbjct: 301 GAARAISSFIDPSLSWKDLPYFRSLTSMPIALKGVQR---VDDVLRAVEAGIDAVVLSNH 357 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S +L +++ + AR + + + GG+R DI+K+ Sbjct: 358 GGRQLEYAPSAIELLAEVMPALR------------ARGWERKIEVYIDGGIRRASDIIKA 405 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ PFL + ++ V A++ L+ E ++M LLG + +L Sbjct: 406 VCLGAKGVGIGRPFLYAMSAYGTEGVEKAMQLLKDEMEMNMRLLGCTSIDQL 457 >gi|145249024|ref|XP_001400851.1| cytochrome b2 [Aspergillus niger CBS 513.88] gi|134081526|emb|CAK41962.1| unnamed protein product [Aspergillus niger] Length = 500 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 128/362 (35%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L + + VD S LG K+S P +++ G Sbjct: 137 ADDEITMRENHSAFHKIWFRPRVL--VDVEHVDFSTTMLGTKVSVPFYVTATALGKLGNP 194 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + +A + V + ++ +L V Sbjct: 195 EGEVVLTRAAHTHDVIQMIPTLASCSFDEIVDARQGDQVQWLQL--------------YV 240 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 + + + A G GLF+ ++ Q + F+D+ Sbjct: 241 NKDRNITKRIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFSDVGSNVQASGGSSVDR 299 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P+LLK V C D+ ++ G++ ++ Sbjct: 300 SQGAARAISSFIDPALSWKDIPWFQSITKMPILLKGVQC---VEDVLRAVEMGVQGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ + ++ R + N+ + GG+R D+L Sbjct: 357 NHGGRQLEFARSAIEVLAEVMPILRE------------RGWENKIEIYIDGGIRRATDML 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G +++EL N +L Sbjct: 405 KALCLGAKGVGIGRPFLYAMSAYGQPGVERAMQLLKDEMEMNMRLIGATKIEEL--NPSL 462 Query: 334 IR 335 I Sbjct: 463 ID 464 >gi|158429268|pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q Flavocytochrome B2: Effects Of Mutating The Active Site Base gi|158429269|pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q Flavocytochrome B2: Effects Of Mutating The Active Site Base Length = 511 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 114/350 (32%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L + +VD S + LG + P +S+ + Sbjct: 148 ANDEVTHRENHNAYHRIFFKPKIL--VDVRKVDISTDMLGSHVDVPFYVSATA-----LC 200 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N V M S + E+ + AP I + Sbjct: 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRK 260 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFAD-------------------- 170 + V LG LF+ ++ + Q + F++ Sbjct: 261 ITDDLVKNVEKLGVKALFVTVDAPS-LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGAS 319 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L +P+++K V + D+ + G+ ++ +GG Sbjct: 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNQGGR 376 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++ ++ + R ++ + GG+R G D+LK++ L Sbjct: 377 QLDFSRAPIEVLAETMP------------ILEQRNLKDKLEVFVDGGVRRGTDVLKALCL 424 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA GL PFL + + V AIE LR E +SM LLG + EL Sbjct: 425 GAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 >gi|317136807|ref|XP_003189982.1| cytochrome b2 [Aspergillus oryzae RIB40] Length = 402 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 54/349 (15%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D NK +D L R L + ++V+ LG + PL +S KM+ + L Sbjct: 57 DANKSMYDRILLRPRVL--RNVNKVNTQTTILGCETGLPLFVSPAA--MAKMVHP-DGEL 111 Query: 80 AIA--AEKTKVAMAVGS-QRVMFSD--------HNAIKSFELRQYAPHTVLISN-----L 123 AIA K V + + SD + + R A L+ + Sbjct: 112 AIARGCAKYGVGQCISTNASYTVSDITACAPGHPFFFQLYINRDRAASEQLLRRVEKSGI 171 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGL-FLHLNPL---QEIIQPNGN---------TNFAD 170 AV L D V +A +GAD ++ P+ Q + G+ + + Sbjct: 172 KAVFLTVDAPVAGKREADERVGADASEIIYTAPMTGAQGVGDAKGSALGRTMGRYIDASF 231 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L + +P++LK + ++ D + + G+ ++ GG S S + Sbjct: 232 TWEDLKWLRRSTSLPIVLKGIQ---TAEDALMATEHGVDGIVVSNHGGRSVDTSTSSIAV 288 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +I + GG+R G DI K+I LGA G+ F Sbjct: 289 LMEIRQC--------------CPQVFEHLEVFVDGGIRRGTDIFKAICLGAKAVGMGRQF 334 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L + V IE ++ E +M LLG + + + LNT + H Sbjct: 335 LYSLTYGQEGVERLIEIMKDELETTMKLLGITDLSQAHPGLLNTLDVDH 383 >gi|168206069|ref|ZP_02632074.1| FMN-dependent dehydrogenase [Clostridium perfringens E str. JGS1987] gi|170662420|gb|EDT15103.1| FMN-dependent dehydrogenase [Clostridium perfringens E str. JGS1987] Length = 340 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 119/323 (36%), Gaps = 48/323 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN K ++ L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVKALEEIKLNMRTIH--DAKNPTTNIEIFGKNMDLPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPATCEVLKEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ D + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQELYLN 330 L+ E +M L G ++ +Y Sbjct: 311 LKGELKSAMVLTGCNSIENIYNR 333 >gi|116196338|ref|XP_001223981.1| hypothetical protein CHGG_04767 [Chaetomium globosum CBS 148.51] gi|88180680|gb|EAQ88148.1| hypothetical protein CHGG_04767 [Chaetomium globosum CBS 148.51] Length = 502 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 118/352 (33%), Gaps = 69/352 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L I ++VD S LG S P +++ G Sbjct: 135 ADDEITLRENHSAFHRIWFRPRIL--IDVEKVDFSTTMLGTPCSIPFYVTATALGKLGHV 192 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + +A V + + ++ +L + Sbjct: 193 EGEVVLTRSAHKHNVVQMIPTLASCSFDDIVDAAAPDQVQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 Q+ Q G GLF+ ++ Q + Sbjct: 245 -------TQRIVQHAEKRGCKGLFITVDAPQLGRREKDMRMKFTDEGSNVQNGQATDNSQ 297 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + I S +P++LK V D+ ++G++ ++ Sbjct: 298 GAARAISSFIDPSLSWADIPWFRSITKMPIVLKGVQR---VEDVVKAAEAGVQGVVLSNH 354 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S ++ ++ V ++ G+ N+ + GG+R DILK+ Sbjct: 355 GGRQLEFARSAIEVLAETMPVLRELGL------------ENKIEIYVDGGVRRATDILKA 402 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ PFL + D V A++ L+ E + M L+G + + EL Sbjct: 403 LCLGAKGVGIGRPFLYAMSAYGQDGVDRAMQLLKDEMEMGMRLIGARTIAEL 454 >gi|294656437|ref|XP_002770264.1| DEHA2D05522p [Debaryomyces hansenii CBS767] gi|199431473|emb|CAR65620.1| DEHA2D05522p [Debaryomyces hansenii] Length = 552 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 117/336 (34%), Gaps = 48/336 (14%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIERI 75 N + R + + +D S LG K S P I++ G K++ R Sbjct: 204 NHLSYQRILFKPRVM--VDVTNIDLSTTMLGTKTSVPFYITATALGKLGHKDGEKVLTRS 261 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 + +A + V + + +L + + G VQ G++ Sbjct: 262 AAKQDVIQMIPTLASCSFDEIVDEATDKQTQWLQLYVNSDREICK---GIVQHAEKRGIK 318 Query: 136 KAHQAVHVLGA-----DGLFLHLNPLQEIIQPNGNTNFADL---------------SSKI 175 V D ++ L +Q G+ I Sbjct: 319 GLFITVDAPQLGRREKDMRSKNVEDLS-HVQGEGDDADRSQGAARAISSFIDTGLNWKDI 377 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 S +P++LK V + D L ++ G+ ++ GG + +L +++ Sbjct: 378 KWFRSITKMPIILKGVQ---TVEDSLLAVEHGVDGIVLSNHGGRQLEYSKPPIELLAELM 434 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 + R N+ + GG+R DILK+I LGA G+ PFL + Sbjct: 435 P------------ILRKRNLHNKLEVYTDGGVRRASDILKAICLGAKGVGIGRPFLYAMS 482 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D VV AI+ L+ E I++M LLGT + L N Sbjct: 483 TYGDDGVVKAIQILKDEMIMNMRLLGTPTIDRLNEN 518 >gi|169617465|ref|XP_001802147.1| hypothetical protein SNOG_11912 [Phaeosphaeria nodorum SN15] gi|111059836|gb|EAT80956.1| hypothetical protein SNOG_11912 [Phaeosphaeria nodorum SN15] Length = 493 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 113/340 (33%), Gaps = 58/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-N 78 D NK FD R L + ++ S LG+ + P +S K+ Sbjct: 144 DANKSMFDRIWFRPRLL--RNIRHINTSTSILGESVKLPFFVSPAA--MAKLAHPDGELA 199 Query: 79 LAIAAEKTKVAMAVGSQ----RVMFSDHNAIKS----FEL-----RQYAPHTVLISN--- 122 LA AEK +A + + + + S F+L R + + + Sbjct: 200 LARGAEKFGIAQCISTNASYTMAEITSSVSPGSLPFFFQLYVNKHRSASEKLLKDAEKNG 259 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGL---------FLHLNPLQEIIQPNGNTNFAD--- 170 + V D VQ + + + N + + D Sbjct: 260 IKGVWFTIDGPVQGKREGDERVKVESATYAKAAISGAAATNDSKGGGLGRTMGTYIDDTF 319 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L + +P++ K V ++ D L +K G+ I GG + Sbjct: 320 SWEDIKWLRKSTQLPIVAKGVQ---TAEDAVLAMKYGLDGIVITNHGGRNLDTSP----- 371 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ L+L R + E + G+R G DI+K++ LGA G+ Sbjct: 372 -------------PSLLTLLEIRKHHPEVFRHLEVYIDCGIRRGTDIVKALCLGAKAVGM 418 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 PFL + V I+ ++ E +M LLG + + Sbjct: 419 GRPFLYSLTYGQEGVEHFIDIMKDELETTMRLLGITDLSQ 458 >gi|50553626|ref|XP_504224.1| YALI0E21307p [Yarrowia lipolytica] gi|49650093|emb|CAG79819.1| YALI0E21307p [Yarrowia lipolytica] Length = 493 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 117/351 (33%), Gaps = 70/351 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKM 71 + + N + F R L + VD S LG K S P I++ G+ + Sbjct: 135 DEITVRENHRAFHKIWFRPRVL--VDVKNVDISTTMLGTKSSVPFYITATALGKLGHPEG 192 Query: 72 IERINR---NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + R + + +A + V + + +L V + Sbjct: 193 EVVLTRGADKMDVIQMIPTLASCSFDEIVDAATDKQTQWMQL--------------YVNM 238 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT---------------------- 166 + + + A G GLF+ ++ Q + Sbjct: 239 DREVTKKIVQHA-EKRGVKGLFITVDAPQLGRREKDMRTKFGDPGAQVQQSDDSVDRSQG 297 Query: 167 ---------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + I S +P++LK V C + D ++ + ++ G Sbjct: 298 AARAISSFIDPSLSWKDIPWFQSITKMPIILKGVQC---AEDALKAVEYKVDGILLSNHG 354 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G ++ ++ + A+ + + + GG+R D++K++ Sbjct: 355 GRQLEFARPSIEVLVEVMAALR------------AKGWQDYIEVYIDGGIRRATDVIKAL 402 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ PFL + D V I+ L+ E ++M L+G ++++L Sbjct: 403 CLGAKGVGIGRPFLYAMSTYGEDGVCHLIQLLKDEMEMNMRLIGATKIEDL 453 >gi|309799716|ref|ZP_07693933.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] gi|308116672|gb|EFO54131.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] Length = 149 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 4/144 (2%) Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + I + GIR D++GRGGTS++ IE+ R + D DWG T +L ++ Sbjct: 1 MDVKTIAKAYEMGIRTVDLSGRGGTSFAYIENRRSGQRD---YLNDWGQSTMQALLNSQD 57 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFI 313 + ++ + + SGG+RN +DI+K ++ GA GL+ L+ + D V++ +ES +++ Sbjct: 58 WKDKLELLVSGGVRNPLDIIKCLVFGAKSVGLSRTMLELVENYPVDVVISIVESWKEDLR 117 Query: 314 VSMFLLGTKRVQELYLNTALIRHQ 337 + M L R+++L L+ + Sbjct: 118 LIMCALNCARIEDLQQVDYLLYGK 141 >gi|115396676|ref|XP_001213977.1| cytochrome b2, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114193546|gb|EAU35246.1| cytochrome b2, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 500 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 123/359 (34%), Gaps = 63/359 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L + + VD S LG +S P +++ G N Sbjct: 137 ADDEITMRENHSAFHKIWFRPRVL--VDVENVDFSTTMLGTPVSIPFYVTATALGKLGNP 194 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E + L AA V + + SF+ A + L Sbjct: 195 EGEVV---LTRAAHDHNVVQMIPTLASC--------SFDEIVDAKRGDQVQWLQLYVNKD 243 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL------------------ 171 ++ + G GLF+ ++ Q + F+D+ Sbjct: 244 RAITKRIIEHAEARGCKGLFITVDAPQLGRREKDMRSKFSDVGSSVQATGGDSVDRSQGA 303 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 I S +P++LK V C D+ ++ G+ ++ GG Sbjct: 304 ARAISSFIDPSLSWKDIPWFQSVTKMPIVLKGVQC---VEDVLRAVEMGVDGVVLSNHGG 360 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ +++ V ++ R + N+ + GG+R D+LK++ Sbjct: 361 RQLEFARSAIEVLAEVMPVLRE------------RGWENKIEIYIDGGIRRATDMLKALC 408 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA G+ PFL + V A++ L+ E ++M L+G + +L + +R Sbjct: 409 LGARGVGIGRPFLYAMSAYGQPGVDRAMQLLKDEMEMNMRLIGATTIADLNPSMIDVRG 467 >gi|169343730|ref|ZP_02864729.1| FMN-dependent dehydrogenase [Clostridium perfringens C str. JGS1495] gi|169298290|gb|EDS80380.1| FMN-dependent dehydrogenase [Clostridium perfringens C str. JGS1495] Length = 340 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 117/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN K ++ L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVKALEEIKLNMRTIH--DAKNPTTNIEIFGKNMDLPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPATCEVLKEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ D + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|254281176|ref|NP_062418.3| hydroxyacid oxidase 2 [Mus musculus] gi|13124286|sp|Q9NYQ2|HAOX2_MOUSE RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Medium chain alpha-hydroxy acid oxidase; AltName: Full=Medium-chain L-2-hydroxy acid oxidase gi|7208440|gb|AAF40201.1|AF231918_1 medium-chain 2-hydroxy acid oxidase HAOX3 [Homo sapiens] gi|8926328|gb|AAF81795.1|AF272947_1 long-chain L-2-hydroxy acid oxidase [Mus musculus] gi|26347607|dbj|BAC37452.1| unnamed protein product [Mus musculus] gi|123121642|emb|CAM26917.1| hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] gi|148707026|gb|EDL38973.1| hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] Length = 353 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 66/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N F L R L ++D G++++ P+ IS T ++ ++ Sbjct: 35 YNDNLAAFRRIRLRPRYL--RDVSKIDTRTTIQGQEINAPICISP-TAFHSIAWADGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+K + + S + ++ AP + L VQ ++D Q Sbjct: 92 TAKAAQKANICYVISSYASYTVE-------DIVAAAPGGLHWFQL-YVQPDWDINKQMVQ 143 Query: 139 QAVHVLGADGLFLHLNP---------------------LQEIIQPN----------GNTN 167 + + LG L + ++ L+++ P + Sbjct: 144 R-IEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPTPLSMPS 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + LL S +P++LK + L+ D EL +K IR ++ GG + + Sbjct: 203 SSSCWNDLPLLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D ++ + + GG+R G D+LK++ LGA L Sbjct: 260 IDALREV-----------------VAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLG 302 Query: 288 SP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A D V ++ L++E M L G + V E+ + LI+ Sbjct: 303 RPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI--SPDLIQ 349 >gi|74180906|dbj|BAE25651.1| unnamed protein product [Mus musculus] Length = 353 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N F L R L ++D G++++ P+ IS T ++ ++ Sbjct: 35 YSDNLAAFRRIRLRPRYL--RDVSKIDTRTTIQGQEINAPICISP-TAFHSIAWADGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+K + + S + ++ AP + L VQ ++D Q Sbjct: 92 TAKAAQKANICYVISSYASYTVE-------DIVAAAPGGLHWFQL-YVQPDWDINKQMVQ 143 Query: 139 QAVHVLGADGLFLHLNP---------------------LQEIIQPN----------GNTN 167 + + LG L + ++ L+++ P + Sbjct: 144 R-IEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPTPLSMPS 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + LL S +P++LK + L+ D EL +K IR ++ GG + + Sbjct: 203 SSSCWNDLPLLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D ++ + + GG+R G D+LK++ LGA L Sbjct: 260 IDALREV-----------------VAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLG 302 Query: 288 SP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A D V ++ L++E M L G + V E+ + LI+ Sbjct: 303 RPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI--SPDLIQ 349 >gi|289619619|emb|CBI53902.1| unnamed protein product [Sordaria macrospora] Length = 501 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 128/361 (35%), Gaps = 73/361 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L + + VD S LG K+ P +++ G + Sbjct: 138 ADDEITLRENHAAFHRIWFRPKVL--VDVENVDFSTTMLGTKVDIPFYVTATALGKLGHV 195 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA+K +A + V ++ + ++ +L + Sbjct: 196 EG-EVLLTRAAKKHNVVQMIPTLASCAFDEIVDAAEGDQVQWLQLYVNKDRAI------- 247 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------------------- 166 ++ + G LF+ ++ Q + Sbjct: 248 --------TERIVKHAEKRGCKALFITVDAPQLGRREKDMRVKFTDDGSNVQKGQETDRN 299 Query: 167 -----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + A I S +P++LK V D+ ++ G++ ++ Sbjct: 300 QGAARAISSFIDPALSWKDIPWFQSITKMPIILKGVQR---VEDVIKAIEVGVQGVVLSN 356 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG S ++ ++ V ++ G+ N+ + GG+R G DILK Sbjct: 357 HGGRQLEFARSAIEVLAETMPVLRELGL------------ENKIEIYIDGGIRRGTDILK 404 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA G+ PFL + D V A++ L+ E ++M L+G ++++L + AL+ Sbjct: 405 ALCLGAKGVGIGRPFLYAMSAYGFDGVDRAMQLLKDEMEMNMRLIGATKIEDL--SPALL 462 Query: 335 R 335 Sbjct: 463 D 463 >gi|302887789|ref|XP_003042782.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256723695|gb|EEU37069.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 494 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 123/360 (34%), Gaps = 71/360 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L + ++VD S LG K S P +++ G Sbjct: 134 ADDEITMRENHSAFHRVWFRPRVL--VDVEQVDFSTTMLGTKCSIPFYVTATALGKLGHP 191 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + +A + + + ++ +L V Sbjct: 192 EGEVVLTRAAHKHDVIQMIPTLASCSLDEILDAQQGDQVQWLQL--------------YV 237 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 + + + A G GLF+ ++ Q + Sbjct: 238 NKDREITRKIIQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFTDPGSDVQSGHDTDNSQ 296 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + A I S +P++LK V D + G++ ++ Sbjct: 297 GAARAISSFIDPALSWKDIPWFQSITSMPIVLKGVQR---VEDAVKAAEMGVQGIVLSNH 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S ++ ++ V ++ G+ + + + GG+R DI+K+ Sbjct: 354 GGRQLDTAPSAIEVLAETMPVLREQGLDS------------KMEVFIDGGIRRSTDIIKA 401 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGA G+ PFL + + V A++ L+ E ++M L+G +V++L N +L+ Sbjct: 402 LCLGAKGVGIGRPFLYAMSSYGQEGVERAMQLLKDEMEMNMRLIGCAKVEDL--NPSLVD 459 >gi|20379611|gb|AAH27754.1| Hydroxyacid oxidase (glycolate oxidase) 3 [Mus musculus] Length = 353 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 66/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N F L R L ++D G++++ P+ IS T ++ ++ Sbjct: 35 YNDNLAAFRRIRLRPRYL--RDVSKIDTRTTIQGQEINAPICISP-TAFHSIAWADGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+K + + S + ++ AP + L VQ ++D Q Sbjct: 92 TAKAAQKANICYVISSYASYTVE-------DIVAAAPGGLHWFQL-YVQPDWDINKQMVQ 143 Query: 139 QAVHVLGADGLFLHLNP---------------------LQEIIQPN----------GNTN 167 + + LG L + ++ L+++ P + Sbjct: 144 R-IEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPTPLSMPS 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + LL S +P++LK + L+ D EL +K IR ++ GG + + Sbjct: 203 TSSCWNDLPLLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D ++ + + GG+R G D+LK++ LGA L Sbjct: 260 IDALREV-----------------VAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLG 302 Query: 288 SP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A D V ++ L++E M L G + V E+ + LI+ Sbjct: 303 RPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI--SPDLIQ 349 >gi|110802455|ref|YP_699158.1| hydroxyacid oxidase 2 [Clostridium perfringens SM101] gi|110682956|gb|ABG86326.1| FMN-dependent dehydrogenase [Clostridium perfringens SM101] Length = 340 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 115/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN + L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVAALEKIKLNMRTIH--DAKNPTTNIEIFGKNMELPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEVLKEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ D + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|317032758|ref|XP_001394349.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 398 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 69/373 (18%), Positives = 122/373 (32%), Gaps = 80/373 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ +D L R L + V LG ++ PL +S + Sbjct: 39 ATDTFTHESNRTMYDRIFLRPRIL--RNVTSVSTKTNILGCRMDLPLFMSPAA---MATL 93 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA+A + V M V + S+ + + + ++ P + V + Sbjct: 94 VHPDGELALARGCARYGVGMCVSTNAAYHLSEITSAAAKQNKKDHPFFFQL----YVNKD 149 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN--------------------------PLQEIIQPN 163 + + A GA +F+ ++ P+ Sbjct: 150 REVSRRLLRTA-EENGAKAIFVTVDAPVAGKREADERVPLDPHDIRFRTPLPMSGACIGG 208 Query: 164 GNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + L +A L +P++LK V ++ D L ++ G+ Sbjct: 209 NDEKGGGLGRSMGQYIDAGFTWEDLAWLKQNTFLPIVLKGVQ---TAEDAVLAVEHGVDG 265 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGG 266 ++ GG S S + L R C + + GG Sbjct: 266 IVVSNHGGRSLDTSTSSIAV------------------LLEIRRRCPQVFDRLEVFVDGG 307 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +R G DI+K+I LGA G+ FL + V IE +R E +M LLG + + Sbjct: 308 IRRGTDIIKAICLGAKAVGMGRHFLYSLCYGQEGVERLIEIMRDELETTMKLLGITDLSQ 367 Query: 327 LY---LNTALIRH 336 + LNT + H Sbjct: 368 AHLGLLNTLDVDH 380 >gi|301786062|ref|XP_002928444.1| PREDICTED: hydroxyacid oxidase 2-like [Ailuropoda melanoleuca] Length = 353 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 48/335 (14%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N F L R L EVD G++++ P+ I+ TG + + + Sbjct: 36 DDNIAAFKKIRLRPRYL--RDVREVDTRTTIQGEEITVPICIAP-TGFHCLVWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSD-----HNAIKSFEL-----RQYAPHTVLISN-LGAVQ 127 A AA+ + + D +K F+L RQ V + LG Sbjct: 93 ARAAQAAGICYITSTYASCTLEDIVATAPRGLKWFQLYVQSDRQLNKQVVQKAESLGFKA 152 Query: 128 LNYDFGVQKA-HQAVHVLGADGLFLHLNPLQEIIQP---NGNTNF-------ADLSSKIA 176 L K ++ L ++L L+++ P N F + + ++ Sbjct: 153 LVITVDTPKIGNRRCDFRNKLDLQMNL-LLKDLRSPKERNSMPYFQMCPIDSSFCWNDLS 211 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 212 WLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVPASIDALTEV-- 266 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAM 295 + + GG+R G D+LK++ LGA L P L A Sbjct: 267 ---------------VAAVKGKMEVYLDGGIRTGNDVLKALALGAKCVFLGRPILWGLAY 311 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V + ++ EF SM L G + V E++ + Sbjct: 312 KGEHGVEEVLNLIKNEFHTSMTLTGCRSVAEIHQD 346 >gi|169599446|ref|XP_001793146.1| hypothetical protein SNOG_02544 [Phaeosphaeria nodorum SN15] gi|111069636|gb|EAT90756.1| hypothetical protein SNOG_02544 [Phaeosphaeria nodorum SN15] Length = 502 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 118/350 (33%), Gaps = 63/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L + ++VD S LG K+ P +++ G N Sbjct: 137 ADDEITLRENHSAFHKIWFRPRVL--VDVEKVDTSTTMLGTKVDIPFYVTATALGKLGNP 194 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E + L A K V + + D E+ A V + Sbjct: 195 EGEVV---LTRGAHKHNVVQMIPTLASCSFD-------EIVDEAKDGQCQWLQLYVNKDR 244 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL------------------ 171 + + A G GLF+ ++ Q + F+D+ Sbjct: 245 EITKRIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDVGSNVQSTSGDNVDRSQGA 303 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 I S +P++LK V C D+ ++ G+ ++ GG Sbjct: 304 ARAISSFIDPSLSWKDIPWFKSITKMPIILKGVQC---VEDVIRAVEVGVDGVVLSNHGG 360 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ +++ + R + + + GG+R DI+K++ Sbjct: 361 RQLDFARSGIEVLAEVMP------------ILRQRGWQDRIEVYIDGGVRRATDIIKAVA 408 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ PFL + V A++ L+ E ++M L+G V +L Sbjct: 409 LGAKGVGIGRPFLYAMSAYGLPGVDRAMQLLKDEMEMNMRLIGASSVADL 458 >gi|12858515|dbj|BAB31343.1| unnamed protein product [Mus musculus] Length = 353 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N F L R L ++D G++++ P+ IS T ++ ++ Sbjct: 35 YNDNLAAFRRIRLRPRYL--RDVSKIDTRTTIQGQEINAPICISP-TAFHSIAWADGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+K + + S + ++ AP + L VQ ++D Q Sbjct: 92 TAKAAQKANICYVISSYASYTVE-------DIVAAAPGGLHWFQL-YVQPDWDINKQMVQ 143 Query: 139 QAVHVLGADGLFLHLNP---------------------LQEIIQPN----------GNTN 167 + + LG L + ++ L+++ P + Sbjct: 144 R-IEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPTPLSMPS 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + LL S +P++LK + L+ D EL +K IR ++ GG + + Sbjct: 203 SSSCWNDLPLLQSMTRLPIILKGI---LTKEDAELAVKHNIRGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D + + + GG+R G D+LK++ LGA L Sbjct: 260 IDALRKV-----------------VAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLG 302 Query: 288 SP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A D V ++ L++E M L G + V E+ + LI+ Sbjct: 303 RPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI--SPDLIQ 349 >gi|168214911|ref|ZP_02640536.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str. F4969] gi|182626134|ref|ZP_02953894.1| FMN-dependent dehydrogenase [Clostridium perfringens D str. JGS1721] gi|170713650|gb|EDT25832.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str. F4969] gi|177908571|gb|EDT71096.1| FMN-dependent dehydrogenase [Clostridium perfringens D str. JGS1721] Length = 340 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 116/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN ++ L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVAALEEIKLNMRTIH--DAKNPTTNIEIFGKNMELPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEVLKEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ D + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|115399236|ref|XP_001215207.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192090|gb|EAU33790.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 773 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 121/343 (35%), Gaps = 55/343 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +N K F L R L +I VD S LGK +S P+ +S TG Sbjct: 132 AEDEISKRQNAKAFKKVALRPRILRKI--PAVDTSTTILGKCVSLPVYMSP-TGIAKLAH 188 Query: 73 ERINRNLAIAAEKTKVA--MAVGS---------QRVMFSDHNAIKSFELRQYAPHTVL-- 119 LA AA +A +A GS R + + R + + Sbjct: 189 RDGECALAAAAGHEGLAQVLANGSSFSIERVMAARTHPQQPVFQQLYVNRDISKSEEIVR 248 Query: 120 ---ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL----- 171 + GA+ + D V + L + + + Q T + + Sbjct: 249 RAERAGAGAIWITVDSPVVGKREMDERLNVE---MQGDDPSPKGQGVAKTMASFISPFID 305 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L ++P+++K + C D L + G++ ++ GG S Sbjct: 306 WDILIWLRGLTNLPIVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRSQDTA------- 355 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILKSIILGASLGGL 286 L+L R Y + GG+R G D+LK++ LGA+ GL Sbjct: 356 -----------QSPLLTLLEIRRYAPSLLNSSMEIYIDGGIRRGTDVLKAVALGATAVGL 404 Query: 287 ASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL A V AIE LR+E +M LG ++EL Sbjct: 405 GRPFLYSLAAGYGEQGVRRAIEILRQEIESNMVFLGATSLKEL 447 >gi|67526887|ref|XP_661505.1| hypothetical protein AN3901.2 [Aspergillus nidulans FGSC A4] gi|40739642|gb|EAA58832.1| hypothetical protein AN3901.2 [Aspergillus nidulans FGSC A4] Length = 493 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 127/363 (34%), Gaps = 71/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N + F R L + + VD S + LG K S P +++ G Sbjct: 137 ADDEITMRENHQAFQKIWFRPRVL--VDVENVDFSTKMLGTKCSIPFYVTATALGKLGNP 194 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + + +A + V + ++ +L + Sbjct: 195 EGEVVLTRAAHDHDVIQMIPTLASCSFDEIVDARRGDQVQWLQLYVNKDRAI-------- 246 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 ++ + G GLF+ ++ Q + F+D+ Sbjct: 247 -------TKRIIEHAEARGCKGLFITVDAPQLGRREKDMRSKFSDVGSNVQATGGDEVDR 299 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V C D+ +++G++ ++ Sbjct: 300 SQGAARAISSFIDPSLSWKDIPWFQSVTKMPIVLKGVQC---VEDVLRAVEAGVQGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ + + + ++ R + N + GG+R DIL Sbjct: 357 NHGGRQLDTAPSGIEVLAQVMPILRE------------RGWENRIEIFIDGGIRRATDIL 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G +++ +L + Sbjct: 405 KALCLGAKGVGIGRPFLFAMSAYGQPGVNRAMQLLKDELEMNMRLIGAQKIADLNPSMVD 464 Query: 334 IRH 336 +R Sbjct: 465 VRG 467 >gi|259481530|tpe|CBF75136.1| TPA: mitochondrial cytochrome b2, putative (AFU_orthologue; AFUA_4G03120) [Aspergillus nidulans FGSC A4] Length = 500 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 127/363 (34%), Gaps = 71/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N + F R L + + VD S + LG K S P +++ G Sbjct: 137 ADDEITMRENHQAFQKIWFRPRVL--VDVENVDFSTKMLGTKCSIPFYVTATALGKLGNP 194 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + + +A + V + ++ +L + Sbjct: 195 EGEVVLTRAAHDHDVIQMIPTLASCSFDEIVDARRGDQVQWLQLYVNKDRAI-------- 246 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 ++ + G GLF+ ++ Q + F+D+ Sbjct: 247 -------TKRIIEHAEARGCKGLFITVDAPQLGRREKDMRSKFSDVGSNVQATGGDEVDR 299 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V C D+ +++G++ ++ Sbjct: 300 SQGAARAISSFIDPSLSWKDIPWFQSVTKMPIVLKGVQC---VEDVLRAVEAGVQGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ + + + ++ R + N + GG+R DIL Sbjct: 357 NHGGRQLDTAPSGIEVLAQVMPILRE------------RGWENRIEIFIDGGIRRATDIL 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G +++ +L + Sbjct: 405 KALCLGAKGVGIGRPFLFAMSAYGQPGVNRAMQLLKDELEMNMRLIGAQKIADLNPSMVD 464 Query: 334 IRH 336 +R Sbjct: 465 VRG 467 >gi|260951123|ref|XP_002619858.1| hypothetical protein CLUG_01017 [Clavispora lusitaniae ATCC 42720] gi|238847430|gb|EEQ36894.1| hypothetical protein CLUG_01017 [Clavispora lusitaniae ATCC 42720] Length = 554 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 115/346 (33%), Gaps = 59/346 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + +VD S LG+K S PL S+ + Sbjct: 201 ADDEITLRENHVAFSRIFFKPRVL--VELKDVDMSTTMLGQKCSVPLYCSAAA---QAKL 255 Query: 73 ERINRNLAIAAEKTK----VAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISN 122 + L A + M S D + F+L + Sbjct: 256 GHPDGEL-SIARGCGKEGVIQMISNSASYPLKDIAEAAIKGQTQWFQLYLSNESAAV--- 311 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN----------------- 165 AV+ + G++ V L ++ Q Sbjct: 312 -NAVKAVKELGLKAIFVTVDTPE---LGRREKDMKLRAQIEARAGPVDNDDGAKDLGTSV 367 Query: 166 ---TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N A I + + VP+ +K V S DI L + GI ++ GG Sbjct: 368 PYGANLAVTWKDIDDIRAMSSVPVAVKGVQ---SVEDIILAAEKGIPAVVLSNHGGRQLD 424 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + ++ +D V ++ G+ ++ + GG+R G D++K++ LGA Sbjct: 425 FSRAPIEVLADAMPVLKEKGLD------------DKIEIYVDGGVRRGSDVIKALCLGAK 472 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL FL + D V AI+ L+ E + M LLG + EL Sbjct: 473 GVGLGRIFLYANSAYGEDGVRKAIQLLKDEIRIDMRLLGVSTIDEL 518 >gi|156841345|ref|XP_001644046.1| hypothetical protein Kpol_1014p5 [Vanderwaltozyma polyspora DSM 70294] gi|156114680|gb|EDO16188.1| hypothetical protein Kpol_1014p5 [Vanderwaltozyma polyspora DSM 70294] Length = 596 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 118/354 (33%), Gaps = 65/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---- 68 + + N + + L + E+D S EF G+K P ++ G Sbjct: 228 ADDEVSLRENHSAYHRIFFKPKVL--VDVSEIDLSTEFFGQKSDAPFYATAAALGKLGNP 285 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + + I R + + TKV V + D + + + + L V Sbjct: 286 AEGEKDITRGVGQGS--TKVPQMVSTLASCSIDEVMGA-----RVSENQPIWFQL-YVNS 337 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHL------------------------NPLQEI-IQPN 163 + V LG LF+ + N L+E + + Sbjct: 338 DRKITNDLVKH-VEELGVKALFVTVDAPALGHREKDEKVKFSANQKESTNMLKEAKVDAD 396 Query: 164 GNTNFADL---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + L I L +P+++K V S D+ + G + I+ Sbjct: 397 ADGASRALSKFIDPSLSWKDIIELKKLTKLPIIIKGVQR---SEDVIKAAEIGCQGVVIS 453 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + ++ ++ R GG+R G DIL Sbjct: 454 NHGGRQLDFSRAPIEVLAESKPEL------------EKRNLDKNFDIFIDGGVRRGTDIL 501 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA GL PF+ + + V A++ LR+E +SM LLG V++L Sbjct: 502 KALCLGAKGVGLGRPFIYANSCYGAAGVQRAVDILREELEMSMRLLGVTSVKDL 555 >gi|60593513|pdb|1TB3|A Chain A, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593514|pdb|1TB3|B Chain B, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593515|pdb|1TB3|C Chain C, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593516|pdb|1TB3|D Chain D, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593517|pdb|1TB3|E Chain E, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593518|pdb|1TB3|F Chain F, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593519|pdb|1TB3|G Chain G, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|60593520|pdb|1TB3|H Chain H, Crystal Structure Analysis Of Recombinant Rat Kidney Long- Chain Hydroxy Acid Oxidase gi|238482|gb|AAB20262.1| long chain alpha-hydroxy acid oxidase=FMN-dependent alpha-hydroxy acid-oxidizing enzyme {EC 1.1.3.15} [rats, kidney, Peptide, 352 aa] Length = 352 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 123/352 (34%), Gaps = 72/352 (20%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N F L R L +VD G+++S P+ IS T ++ ++ Sbjct: 34 YSENIAAFKRIRLRPRYL--RDMSKVDTRTTIQGQEISAPICISP-TAFHSIAWPDGEKS 90 Query: 79 LAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A AA++ + + S D + AP L ++ ++DF Q Sbjct: 91 TARAAQEANICYVISSYASYSLED--------IVAAAPEGFRWFQL-YMKSDWDFNKQMV 141 Query: 138 HQAVHVLGADGLFLHLN---------------------------------PLQEIIQPNG 164 +A LG L + ++ P Q + P Sbjct: 142 QRA-EALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSV--PVS 198 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + ++LL S +P++LK + L+ D EL +K ++ ++ GG + Sbjct: 199 FPKASFCWNDLSLLQSITRLPIILKGI---LTKEDAELAMKHNVQGIVVSNHGGRQLDEV 255 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D ++ + + GG+R G D+LK++ LGA Sbjct: 256 SASIDALREV-----------------VAAVKGKIEVYMDGGVRTGTDVLKALALGARCI 298 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L P L A D V ++ L E M L G + V E+ + LI+ Sbjct: 299 FLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEI--SPDLIQ 348 >gi|110800372|ref|YP_696560.1| FMN-dependent dehydrogenase [Clostridium perfringens ATCC 13124] gi|168211674|ref|ZP_02637299.1| FMN-dependent dehydrogenase [Clostridium perfringens B str. ATCC 3626] gi|110675019|gb|ABG84006.1| FMN-dependent dehydrogenase [Clostridium perfringens ATCC 13124] gi|170710360|gb|EDT22542.1| FMN-dependent dehydrogenase [Clostridium perfringens B str. ATCC 3626] Length = 340 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 115/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN ++ L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVAALEEIKLNMRTIH--DAKNPTTNIEIFGKNMELPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEVLPEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFAHGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|322712484|gb|EFZ04057.1| hypothetical protein MAA_01131 [Metarhizium anisopliae ARSEF 23] Length = 470 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 123/363 (33%), Gaps = 77/363 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F + L + + VD S LG + S P +++ G + Sbjct: 110 ADDEITMRENHSAFHRIWFRPQVL--VDVEHVDFSTTMLGTRCSIPFYVTATALGKLGHH 167 Query: 71 MIERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 E I L AA K +A + V + ++ +L Sbjct: 168 EGEVI---LTRAAHKHNVIQMIPTLASCSFDEIVDAKQGDQVQWLQL------------- 211 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT----------------- 166 V + + + A G GLF+ ++ Q + Sbjct: 212 -YVNKDREITRKIVQHA-EARGCKGLFITVDAPQLGRREKDMRSKFTEQGSNVQSGQDTD 269 Query: 167 -------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + I S +P++LK V D+ ++ + Sbjct: 270 NSQGAARAISSFIDPSLSWKDIPWFKSITKMPVVLKGVQR---VEDVIRAIEVQADGVVL 326 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG S ++ ++ V + AR ++ + GG+R DI Sbjct: 327 SNHGGRQLDTARSGIEILAETMPVLR------------ARGLQDKIEIFIDGGIRRATDI 374 Query: 274 LKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +K++ LGA G+ PFL + D V A++ L+ E ++M L+G RV++L N + Sbjct: 375 IKALCLGARGVGIGRPFLYAMSAYGQDGVEKAMQLLKDEMEMNMRLIGCARVEDL--NPS 432 Query: 333 LIR 335 L+ Sbjct: 433 LVD 435 >gi|14091775|ref|NP_114471.1| hydroxyacid oxidase 2 [Rattus norvegicus] gi|4033693|sp|Q07523|HAOX2_RAT RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Long chain alpha-hydroxy acid oxidase; AltName: Full=Long-chain L-2-hydroxy acid oxidase gi|311833|emb|CAA47629.1| (S)-2-hydroxy-acid oxidase [Rattus norvegicus] gi|50925465|gb|AAH78781.1| Hao2 protein [Rattus norvegicus] gi|149030520|gb|EDL85557.1| hydroxyacid oxidase 2 (long chain) [Rattus norvegicus] Length = 353 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 123/352 (34%), Gaps = 72/352 (20%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N F L R L +VD G+++S P+ IS T ++ ++ Sbjct: 35 YSENIAAFKRIRLRPRYL--RDMSKVDTRTTIQGQEISAPICISP-TAFHSIAWPDGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A AA++ + + S D + AP L ++ ++DF Q Sbjct: 92 TARAAQEANICYVISSYASYSLED--------IVAAAPEGFRWFQL-YMKSDWDFNKQMV 142 Query: 138 HQAVHVLGADGLFLHLN---------------------------------PLQEIIQPNG 164 +A LG L + ++ P Q + P Sbjct: 143 QRA-EALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSV--PVS 199 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + ++LL S +P++LK + L+ D EL +K ++ ++ GG + Sbjct: 200 FPKASFCWNDLSLLQSITRLPIILKGI---LTKEDAELAMKHNVQGIVVSNHGGRQLDEV 256 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D ++ + + GG+R G D+LK++ LGA Sbjct: 257 SASIDALREV-----------------VAAVKGKIEVYMDGGVRTGTDVLKALALGARCI 299 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L P L A D V ++ L E M L G + V E+ + LI+ Sbjct: 300 FLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEI--SPDLIQ 349 >gi|8920285|emb|CAB96380.1| long chain 2-hydroxy acid oxidase [Mus musculus] Length = 353 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N F L R L ++D G++++ P+ IS T ++ ++ Sbjct: 35 YNDNLAAFRRIRLRPRYL--RDVSKIDTRTTIQGQEINAPICISP-TAFHSIAWADGEKS 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+K + + S + ++ AP + L VQ ++D Q Sbjct: 92 TAKAAQKANICYVISSYASYTVE-------DIVAAAPGGLHWFQL-YVQPDWDINKQMVQ 143 Query: 139 QAVHVLGADGLFLHLNP---------------------LQEIIQPN----------GNTN 167 + + LG L + ++ L+++ P + Sbjct: 144 R-IEALGFKALVVTVDAPVLGHRRGNXRXLLDLEANIKLKDLRSPGESKSGLPTPLSMPS 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + LL S +P++LK + L+ D EL +K I ++ GG + + Sbjct: 203 SSSCWNDLPLLQSMTRLPIILKGI---LTKEDAELAVKHNIXGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D ++ + + GG+R G D+LK++ LGA L Sbjct: 260 IDALREV-----------------VAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLG 302 Query: 288 SP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A D V ++ L++E M L G + V E+ + LI+ Sbjct: 303 RPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEI--SPDLIQ 349 >gi|18310860|ref|NP_562794.1| glycolate oxidase [Clostridium perfringens str. 13] gi|18145542|dbj|BAB81584.1| probable glycolate oxidase [Clostridium perfringens str. 13] Length = 340 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 115/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN ++ L R + ++E GK + PL + +TG M +++ Sbjct: 46 RNVAALEEIKLNMRTIH--DAKNPTTNIEIFGKNMELPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEVLPEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFAHGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|225636766|dbj|BAH29964.1| glyoxylate dehydrogenase [Fomitopsis palustris] Length = 502 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 114/347 (32%), Gaps = 58/347 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ + R L VD S LG+K S P+ IS+ G E Sbjct: 140 DEITLRENRMAYQRVWFRPRIL--RDVTNVDWSTTILGQKSSLPVYISATALGKLGHPEG 197 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 L AA+ V V + D L P L L V + + Sbjct: 198 -ELCLTRAAQNHGVIQMVATLASCSFDEI------LDAAKPDQSLFLQL-YVNRDREITR 249 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD----------------------- 170 + A G LF+ ++ Q + F Sbjct: 250 KYVQHA-EARGVKALFITVDAPQLGRREKDMRMKFVGEEGVAKVQDGQSGIKKDEGVARA 308 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 I S +P++LK + ++ D L ++G++ ++ GG Sbjct: 309 ISSFIDPSLSWKDIPWFKSITKMPIILKGIS---TAEDAILAYEAGVQGIVLSNHGGRQL 365 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 S ++ ++ + G + GG+R D+LK++ LGA Sbjct: 366 DTARSGLEVLVEVVPALRARGY----------FPDPNFEIFVDGGVRRASDVLKALALGA 415 Query: 282 SLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL + V AI+ R EF ++M LLG + + EL Sbjct: 416 KAVGVGRPFLYAFCSYGQEGVEKAIQIFRDEFEMNMRLLGARTIDEL 462 >gi|320580149|gb|EFW94372.1| cytochrome b2, mitochondrial precursor [Pichia angusta DL-1] Length = 438 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 72/340 (21%), Positives = 123/340 (36%), Gaps = 40/340 (11%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-------- 66 + + N F + L I E LG KLS P I++ G Sbjct: 89 DEISLRENHYAFSRIFFRPQCL--IDSSSCSLDTEILGTKLSAPFYITAFAGSPSAHPIA 146 Query: 67 --------GNNKMIERINRNLAIAAEKTKVAMAVGSQ---RVMFSDHNAIKSFELRQYAP 115 G +I I L+ E+ + G Q ++ F + E ++ Sbjct: 147 ERGLRNAAGLENIIHLIPFQLSFPVEEYCAGLKPGQQNFYQLHFYNEKQFD--EAPEFFK 204 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 + N+ AV +N D + + A L E+ + F+ + Sbjct: 205 KLESMPNIKAVFINVDLNALGNREKDSKIRARIDSGTTEAL-EVYAHSDVKYFSLTWDHM 263 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + +P++LK V L+ D+ ++G+ I+ GG ++ ++ Sbjct: 264 KQIQQMTKLPIVLKGV---LNKNDVLKAAEAGLAGALISNHGGRQLDFAMPPIEILAESK 320 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 + ++ G+ + GG+R G DI+K++ LGAS GL PFL A Sbjct: 321 QLLKEKGLD------------KNFELFIDGGIRRGSDIIKALCLGASGVGLGRPFLYSLA 368 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V AI+ L+ E I M LLG + EL + I Sbjct: 369 SYGEEGVQKAIQILKTEMIRDMKLLGVSSISELNEDMVDI 408 >gi|302915312|ref|XP_003051467.1| hypothetical protein NECHADRAFT_41767 [Nectria haematococca mpVI 77-13-4] gi|256732405|gb|EEU45754.1| hypothetical protein NECHADRAFT_41767 [Nectria haematococca mpVI 77-13-4] Length = 330 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 114/325 (35%), Gaps = 56/325 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ ++ + + R L ++ D VD S E G K + PL S + Sbjct: 45 AMDLVTLRDNEEAYNRYKIRPRIL--VNVDNVDISSEIFGCKTALPLGFSPAA---MHRL 99 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +A AA + M + S D A S P+ + + L + Sbjct: 100 AHPDGEIATSRAAANIGICMGLSSYATASLEDVAAQGS-----GNPYVMQLCVLR----D 150 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + +Q +A L+ + I L + L +K Sbjct: 151 RETTLQMLRRAEGESDKHDFDPSLD----------------WDTAIPWLRQHTKLQLWIK 194 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V ++ D++L +K G+ ++ GG + + T +L Sbjct: 195 GV---YAAEDVQLAIKYGLDGVIVSNHGGRQLDGVPA------------------TLDAL 233 Query: 250 EM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIES 307 + GG+R G DI K++ +GAS + P A + + V A++ Sbjct: 234 RECVIAANGKIPVAVDGGIRRGTDIFKALAMGASHCFVGRIPIWGLAYNGQEGVELALKI 293 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTA 332 L EF ++M L G + ++++ + Sbjct: 294 LMYEFKLAMALAGCRTIKDISRSHL 318 >gi|238852756|ref|ZP_04643162.1| L-lactate dehydrogenase [Lactobacillus gasseri 202-4] gi|238834606|gb|EEQ26837.1| L-lactate dehydrogenase [Lactobacillus gasseri 202-4] Length = 349 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 122/334 (36%), Gaps = 64/334 (19%) Query: 32 IHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVAM 90 + RAL + + + EFLG +L P++I + G ++ A M Sbjct: 1 MPRALTGMQ--DPKLNTEFLGMELKTPVMICPIACHGIANAEAEVDTAKGAKAAGALFGM 58 Query: 91 AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 + + + + +A+ +P + + + N+DF ++V G G F Sbjct: 59 STYANKSVQDVQSAVGD------SPRFMQL----YLSKNWDFNKMVIEESVKA-GFTGFF 107 Query: 151 LHLNPL-QEIIQPNGNTNFA---------DLS----------------------SKIALL 178 L ++ L + N TNF + + I + Sbjct: 108 LTVDALVSGYREANLRTNFTYPVPLAFFNEWTGGKGEGQSVAQMYASSAQNIGPDDIRKI 167 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 DVP+++K V C D L + +G ++ GG + D+ +I Sbjct: 168 KEIADVPVIVKGVECA---EDAMLAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAV 224 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDS 297 + P I GG+R G + K++ LGA L G+ PFL A+ Sbjct: 225 KSCDHP--------------VPIILDGGVRRGSHVFKALALGADLVGIGRPFLYGLALGG 270 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + V + I+ L KE ++ M L G K ++++ Sbjct: 271 AQGVQSVIDQLNKELLIDMQLTGCKTIEDIKHAK 304 >gi|327297791|ref|XP_003233589.1| L-lactate dehydrogenase [Trichophyton rubrum CBS 118892] gi|326463767|gb|EGD89220.1| L-lactate dehydrogenase [Trichophyton rubrum CBS 118892] Length = 460 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 111/320 (34%), Gaps = 40/320 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----N 68 + + N F R L + + V LG +S P +++ G + Sbjct: 135 CEDEMTMRENHTAFHRIWFRPRIL--VDVERVCTRTTMLGTPVSAPFYVTATALGKLGHS 192 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + N++ AI + A A G + + + R+ + G+ Sbjct: 193 GRRASTSNKDRAITRRIVEHAEARGCRGLFITVDAPQLG---RREKDMRSKFAEQGSSVQ 249 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 ++ A F+ + + + S +P+ L Sbjct: 250 ASSSTAGAVDRSQGAARAISSFI---------------DPSLSWKDLPYFRSITKMPIAL 294 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K V D+ +++GI ++ GG S +L +D+ + Sbjct: 295 KGVQR---VDDVLRAVEAGIDAVVLSNHGGRQLEYAPSAIELLADVMPALR--------- 342 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 AR + + GG+R DILK++ LGA G+ PFL + ++ V A++ Sbjct: 343 ---ARGWDRRIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLYAMSAYGTEGVEKAMQL 399 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L+ E ++M LLG + +L Sbjct: 400 LKDEMEMNMRLLGCTSIDQL 419 >gi|254573152|ref|XP_002493685.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia pastoris GS115] gi|238033484|emb|CAY71506.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia pastoris GS115] gi|328354489|emb|CCA40886.1| L-lactate dehydrogenase (cytochrome) [Pichia pastoris CBS 7435] Length = 574 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 125/338 (36%), Gaps = 42/338 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNNKM 71 + + N + R L + ++ E LG K S P IS+ G+ + Sbjct: 219 DEITLRENHFAYHKVFFRPRIL--VDVTNIELETEMLGIKTSAPFYISATALAKLGHPEG 276 Query: 72 IERINR---NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVL---- 119 I + I + +A + V + + F+L R+ A + + Sbjct: 277 EVGIAKGAGRGDIIQMISTLASCSLDETVAAAKEGQSQWFQLYVNSDREVAYNMIKHCEE 336 Query: 120 --ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN-------TNFAD 170 I + G ++ + + + L + E+ + NG + A Sbjct: 337 LGIKGIFVTVDAPSLGNREKDRRMKFTEDTDVDLSGDGKTEVNRSNGAAAALSSFIDTAV 396 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 IA ++P+++K + + D+ L + G+ ++ GG + Sbjct: 397 TWKDIAEFKRRTNLPIVIKGIQR---TEDVILAAEHGVDGVVLSNHGGRQLDGAPPSLQV 453 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 ++ V + G+ + + GG+R G DI+K++ LGA GL PF Sbjct: 454 LAECMPVLRQRGLD------------KKLEVFVDGGIRRGTDIMKALCLGAKGVGLGRPF 501 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L + D V AI+ L+ E I++M LLG ++ +L Sbjct: 502 LYANSAYGPDGVEKAIDILKNELIMNMRLLGVTKISDL 539 >gi|281201933|gb|EFA76141.1| hydroxyacid oxidase [Polysphondylium pallidum PN500] Length = 366 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 113/355 (31%), Gaps = 75/355 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ +F L+ R L I VD LG LSFPL+I+ KM Sbjct: 37 DQITLAENQNYFSRIKLLPRCL--IDVSNVDMRTNVLGIDLSFPLMIAPTA--MQKMAHP 92 Query: 75 INRNLA-IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + AA + +M + S + + + H N G QL Sbjct: 93 VGETATWSAANELGTSMTLSSLSTT----------SIEELSKHAN--GNPGWFQLYVFKD 140 Query: 134 ---VQKAHQAVHVLGADGLFLHLNPL----QEIIQPNGNTNFADL--------------- 171 + Q +G + L ++ +E NG L Sbjct: 141 RAITKNLVQRAEQIGYKAIVLTVDTPYLGRREADYRNGFRLPHGLKLQNFSDLPLADVEG 200 Query: 172 ---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + L S +P+++K V +S D E+ + G+ ++ Sbjct: 201 GLNAYVATMIDSSLTWKDLDWLKSITKLPIIVKGV---MSPRDAEIAVTHGVDAIIVSNH 257 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 G S ++ I + I GG+R G DILK+ Sbjct: 258 GARQLDTAPSTIEVLPYI-----------------VKAVNGRCPVILDGGVRRGTDILKA 300 Query: 277 IILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + GA + P L A+ D V + L E +SM L G K + ++ + Sbjct: 301 LACGAKAVMIGRPVLWGLAVGGKDGVKRVLSLLHDELKLSMALAGVKSISQINKS 355 >gi|67524265|ref|XP_660194.1| hypothetical protein AN2590.2 [Aspergillus nidulans FGSC A4] gi|40745539|gb|EAA64695.1| hypothetical protein AN2590.2 [Aspergillus nidulans FGSC A4] gi|259488027|tpe|CBF87158.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 488 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 73/351 (20%), Positives = 126/351 (35%), Gaps = 64/351 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN--- 76 D N+ R + VD S LG ++S PL I G+ IN Sbjct: 149 DANESMLKRIWFRPRVM--RDVASVDTSTSMLGIQMSIPLFICPAGVGS-----LINPDA 201 Query: 77 -RNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKSF---------ELRQYAPHTVLISNL- 123 + LA AAE T + + + + + RQ + +L + Sbjct: 202 EKALARAAESTGIVEIISTNSAHPLADIVEQAPGYPFLFQLYLNKQRQKSKELLLKAESL 261 Query: 124 --GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN---------TNFADLS 172 A+ L D + ++ L +D + +P+ + G + Sbjct: 262 GCRAIFLTVDSAGRGKRESDERLKSDEMLR--DPVTGKLMKAGAGLTRIMGSFIDQGMTW 319 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S +P++LK + S+ D ++ ++ + ++ GG + Sbjct: 320 KDLAWIRSVTKLPIILKGIT---SAEDAKIAMQYKVDGILLSNHGGRNLDYSP------- 369 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLAS 288 PT L L C E + GG R G DI+K++ LGA G+ Sbjct: 370 -----------PTILLLLELHKNCPEIFDKMEIYVDGGFRRGADIIKALCLGAKAVGMGR 418 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 FL ++ V I+ L+ E M L+G K + E+Y +NTA + H Sbjct: 419 SFLYALNYGTEGVEHLIQLLKAEMEAVMKLIGIKDLSEVYPGLVNTADVDH 469 >gi|149708916|ref|XP_001497100.1| PREDICTED: similar to Hydroxyacid oxidase 2 (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) [Equus caballus] Length = 352 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 121/350 (34%), Gaps = 65/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F L R L EVD G+K+S P+ IS TG + Sbjct: 29 AGEGFTKEDNIAAFKKIRLRPRYLK--DVSEVDTRTIIQGEKISAPICISP-TGFHCLAW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L VQ + Sbjct: 86 PDGEMSTARAAQAADICYITSTYASCTLED--------IVATAPRGLRWFQL-YVQRDRQ 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP---------------------LQEIIQPN------- 163 Q + V LG L + ++ L+++ P Sbjct: 137 LNKQLIQR-VESLGFKALVITVDVPITGNRRHDIRNQVDLKTNLLLKDLRSPKESSGPCL 195 Query: 164 --GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + ++ ++ L S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 196 QMSSIDPSNCWDDLSWLQSITQLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQL 252 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D +++ + + GG+R G D+LKS+ LGA Sbjct: 253 DEVLASIDALTEV-----------------VAAVKGKIEVYLDGGIRTGNDVLKSLALGA 295 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L+ EF SM L G + V E+ + Sbjct: 296 KCVFLGRPILWGLACKGERGVEEVLNILKNEFHTSMTLTGCRSVAEINRD 345 >gi|258578229|ref|XP_002543296.1| cytochrome b2 [Uncinocarpus reesii 1704] gi|237903562|gb|EEP77963.1| cytochrome b2 [Uncinocarpus reesii 1704] Length = 523 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 117/354 (33%), Gaps = 70/354 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER---INR 77 N F R L + + VD S LG +S P +++ G + + + Sbjct: 164 ENHSAFHKIWFRPRIL--VDVENVDISTTMLGTPVSVPFYVTATALGKLGHADGEVCLTK 221 Query: 78 NLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A +A + V + + +L V + D Sbjct: 222 AAASHDVVQMIPTLASCSFDEIVDAAIDKQTQWLQL--------------YVNKDRDITR 267 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD----------------------- 170 + + A G GLF+ ++ Q + F+D Sbjct: 268 KIVNHA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDPGSDVQQTDNSVDRSQGAARAIS 326 Query: 171 -------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 I S +P+ LK V D+ ++ G+ ++ GG Sbjct: 327 SFIDPSLSWKDIPWFQSITKMPIALKGVQR---VDDVLRAVEMGVPAVVLSNHGGRQLEF 383 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S +L +D+ + AR + N+ + GG+R DI+K++ LGA Sbjct: 384 APSAIELLADVMPALR------------ARGWENKIEVFVDGGVRRATDIIKALCLGAKG 431 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 G+ PFL + V A++ L+ E ++M LLG V +L + IR Sbjct: 432 VGIGRPFLYAMSTYGVPGVERAMQLLKDEMTMNMRLLGCTSVDQLTPDLLDIRG 485 >gi|189204292|ref|XP_001938481.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985580|gb|EDU51068.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 509 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 119/350 (34%), Gaps = 63/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L + ++VD S LG K P +++ G N Sbjct: 144 ADDEITLRENHSAFHKIWFRPRVL--VDVEKVDMSTTMLGTKCDIPFYVTATALGKLGNP 201 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E I L A K V + + D E+ A + V + Sbjct: 202 EGEVI---LTRGAHKHNVIQMIPTLASCSFD-------EIVDEAKDGQVQWLQLYVNKDR 251 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL------------------ 171 + + A G GLF+ ++ Q + F D+ Sbjct: 252 EVTKRIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFHDVGSNVQSTGGDNVDRSQGA 310 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 I S +P++LK + C D+ ++ G+ ++ GG Sbjct: 311 TRAISSFIDPSLSWKDIPWFKSITKMPIILKGLQCI---EDVIRAVEVGVDGVVLSNHGG 367 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ +++ + +AR + + + GG+R DI+K++ Sbjct: 368 RQLDFACSAVEVLAEVMP------------VLLARGWQDRIEVYIDGGVRRATDIIKAVA 415 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ PFL + V A++ L+ E ++M L+G + +L Sbjct: 416 LGAKGVGIGRPFLYAMSAYGLPGVDRAMQLLKDEMEMNMRLIGASSIADL 465 >gi|50292501|ref|XP_448683.1| hypothetical protein [Candida glabrata CBS 138] gi|49527995|emb|CAG61646.1| unnamed protein product [Candida glabrata] Length = 593 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 116/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKM 71 + N + + L + +VD S E LG K+ P +++ GN K Sbjct: 229 DEVSYRENHNAYHRIFFNPKVL--VDVSKVDTSTEMLGHKVDVPFYVTATALCKLGNPKE 286 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 E+ A M + + S + + + QL + Sbjct: 287 GEK------DIARGCG--QGPNKTPQMI---STLASCSVDEIVNAAPSKDQVIWYQLYVN 335 Query: 132 FG---VQKAHQAVHVLGADGLFLHLNPLQ--------------EIIQPNGNT-------- 166 + + V LG +F+ ++ + P Sbjct: 336 SDRKITENLIKHVEDLGVKAIFVTVDAPSLGSREKDKKVKFNNTMSGPKSMKKSDVGESE 395 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + I +L +P+++K V D+ + G ++ Sbjct: 396 GAAQTLSKFIDPSLSWQDIKILRKKTKLPIVIKGVQR---VQDVVKAAEIGCNGVVLSNH 452 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + ++ ++ V ++ + + GG+R G D++K+ Sbjct: 453 GGRQLDFARAPIEVLAETMPVLKE------------KKLDKNFEVFVDGGVRRGTDVIKA 500 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGAS GL PFL + D V AI+ L+ E ++M LLG ++++ Sbjct: 501 LCLGASGVGLGRPFLYANSCYGKDGVQKAIDLLKTEIEMNMRLLGVTSIKDM 552 >gi|312219892|emb|CBX99834.1| similar to cytochrome b2 [Leptosphaeria maculans] Length = 509 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 119/350 (34%), Gaps = 63/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F R L I ++VD + LG K+ P +++ G N Sbjct: 144 ADDEITLRENHNAFHKIWFRPRVL--IDVEKVDTTTTMLGAKVDIPFYVTATALGKLGNP 201 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E + L A K V + + D E+ A + V + Sbjct: 202 EGEVV---LTRGARKHNVIQMIPTLASCSFD-------EIMDEAKDGQVQWLQLYVNKDR 251 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL------------------ 171 D + A G GLF+ ++ Q + F D+ Sbjct: 252 DVTRRIVEHA-EKRGCKGLFITVDAPQLGRREKDMRSKFEDVGSNVQSTGGDNVDRSQGA 310 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 I S +P++LK V C D+ ++ G+ ++ GG Sbjct: 311 ARAISSFIDPSLSWKDIPWFRSITKMPIILKGVQC---VEDVIRAVEIGVEGVVLSNHGG 367 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ +++ V + R + + + GG+R DI+K++ Sbjct: 368 RQLDFARSGVEVLAEVMPVLRQ------------RGWQDRIEVYIDGGIRRATDIIKAVA 415 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ PFL + V A++ L+ E ++M L+G + +L Sbjct: 416 LGAKGVGIGRPFLYAMSAYGLPGVDRAMQLLKDEMEMNMRLIGASCIADL 465 >gi|226288370|gb|EEH43882.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 513 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 116/358 (32%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + VD S LG +S P +++ G Sbjct: 143 ADDEISLRENHSAFHKIWFRPRVL--VDVQNVDISSTMLGTPVSAPFYVTAAALGKLGHP 200 Query: 73 ERINRNLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA + A + + N I+ +L + Sbjct: 201 EG-EVCLTRAANTHNIIQMIPTLASCSFDEIIDARGPNQIQWLQLYVNKDRGI------- 252 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD-------------- 170 ++ Q G LF+ ++ Q + F+D Sbjct: 253 --------TKRIVQHAEKRGCKALFITVDAPQLGRREKDMRTKFSDRGSDVQASDTSSES 304 Query: 171 --------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S +P++LK V D+ ++ GI Sbjct: 305 SVDRSQGAARAISSFIDPSLSWTDIPWFQSITTMPIVLKGVQR---VDDVLRAVEVGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +D+ + R + + + GG+R G Sbjct: 362 VVLSNHGGRQLDFSPSSIELLADVMPELR------------RRGWQDRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G +++L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGVPGVERAMQLLKDELVMNMRLIGCSSIEQL 467 >gi|254975973|ref|ZP_05272445.1| dehydrogenase [Clostridium difficile QCD-66c26] gi|255093361|ref|ZP_05322839.1| dehydrogenase [Clostridium difficile CIP 107932] gi|255315106|ref|ZP_05356689.1| dehydrogenase [Clostridium difficile QCD-76w55] gi|255517776|ref|ZP_05385452.1| dehydrogenase [Clostridium difficile QCD-97b34] gi|255650891|ref|ZP_05397793.1| dehydrogenase [Clostridium difficile QCD-37x79] gi|260683963|ref|YP_003215248.1| putative dehydrogenase [Clostridium difficile CD196] gi|260687623|ref|YP_003218757.1| putative dehydrogenase [Clostridium difficile R20291] gi|306520778|ref|ZP_07407125.1| putative dehydrogenase [Clostridium difficile QCD-32g58] gi|260210126|emb|CBA64270.1| probable dehydrogenase [Clostridium difficile CD196] gi|260213640|emb|CBE05467.1| probable dehydrogenase [Clostridium difficile R20291] Length = 340 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 121/317 (38%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ + ++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAAPVSGTLLNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNSGNGIVFIKPWNNSKIIEKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N QE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQFQE------NPFSPKTIDEIRELVESTKLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMAVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKVRN 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L G + V+++ Sbjct: 315 ELCETMILTGCQNVKDI 331 >gi|322695403|gb|EFY87212.1| mitochondrial cytochrome b2, putative [Metarhizium acridum CQMa 102] Length = 477 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 71/366 (19%) Query: 7 IDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D I + I F + L + + VD S LG + S P +++ Sbjct: 111 DDEIVLGPFSNFITPPITAFHRIWFRPQVL--VDVEHVDFSTTMLGTRCSIPFYVTATAL 168 Query: 67 G--NNKMIERI----NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 G + E I + +A + V + ++ +L Sbjct: 169 GKLGHHEGEVILTRAAHKHDVIQMIPTLASCSFDEIVDARQGDQVQWLQL---------- 218 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------- 166 V + + + A G GLF+ ++ Q + Sbjct: 219 ----YVNKDREITRKIVQHA-EARGCKGLFITVDAPQLGRREKDMRTKFTEQGSNVQSGQ 273 Query: 167 ----------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + + I S +P++LK V D+ ++ Sbjct: 274 DTDNSQGAARAISSFIDPSLSWKDIPWFKSITKMPIILKGVQR---VEDVVRAIEVQADG 330 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S ++ ++ V + AR ++ + GG+R Sbjct: 331 VVLSNHGGRQLDTARSGIEILAETMPVLR------------ARGLQDKIEIFIDGGIRRA 378 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 DI+K++ LGA G+ PFL + D V A++ L+ E + M L+G RV++L Sbjct: 379 TDIIKALCLGARGVGIGRPFLYAMSAYGQDGVEKAMQLLKDEMEMGMRLIGCARVEDL-- 436 Query: 330 NTALIR 335 N +L+ Sbjct: 437 NPSLVD 442 >gi|168215506|ref|ZP_02641131.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239] gi|182382382|gb|EDT79861.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239] Length = 340 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 115/318 (36%), Gaps = 48/318 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN ++ L R + ++ GK + PL + +TG M +++ Sbjct: 46 RNVAALEEIKLNMRTIH--DAKNPTTNIGIFGKNMELPLFAAPITGTMLNMGGKVSEREY 103 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGAVQL 128 I + + VG V ++ + +Y ++ + +++ Sbjct: 104 IEGVVKGCLDSGIYPMVGDTAVDLCLATNLEV--IEEYNGQGIIFIKPWKNEVVIEKIKM 161 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + G L ++ P ++P +I L ++ +P +L Sbjct: 162 AEKAGAFAVGVDIDAAGLITLAMNGKP----VEPKN-------LEEIKELVNSTKLPFIL 210 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + EL +++G+ ++ GG + + ++ +I Sbjct: 211 KGI---MTPDEAELAVEAGVDAIVVSNHGGRVLDQTPASCEVLKEIAA------------ 255 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIES 307 + + + GG+R GVDILK I LGA + PF+ D + V + S Sbjct: 256 -----RVKGKVKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYVNS 310 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ E +M L G ++ Sbjct: 311 LKGELKSAMVLTGCNSIE 328 >gi|302882321|ref|XP_003040071.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256720938|gb|EEU34358.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 493 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 121/353 (34%), Gaps = 69/353 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F + L + + VD + LG K P+ +++ G Sbjct: 134 ADDEITLRENHSAFHRIWFRPQIL--VDVENVDITTTMLGDKTDIPVYVTATALGKLGHP 191 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + I +A + + + + ++ +L V Sbjct: 192 EGEVVLTRSSGKHNIIQMIPTLASCSFDEIIDAASGDQVQWLQL--------------YV 237 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 + D + A G GLF+ ++ Q + Sbjct: 238 NKDRDITRKIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFTDPGSHVQEGQDTDNSQ 296 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + A I S +P+++K V D+ ++ G + ++ Sbjct: 297 GAARAISTFIDPALSWKDIPWFQSITSMPIVIKGVQR---VEDVLKAVEYGCQGVVLSNH 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S ++ ++ V ++ G+ + + + GG+R G DILK+ Sbjct: 354 GGRQLEFARSAVEILAETMPVLRERGLDS------------KIEVYIDGGVRRGTDILKA 401 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + LGA G+ PFL + V A++ L+ E ++M L+G R+ EL+ Sbjct: 402 LCLGARGVGIGRPFLYAMSAYGEPGVDRAMQLLKDELEMNMRLIGCNRIDELH 454 >gi|58270314|ref|XP_572313.1| cytochrome b2, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|57228571|gb|AAW45006.1| cytochrome b2, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 593 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 115/346 (33%), Gaps = 56/346 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D N+K F+ R L + + D + LG+ S P+ IS G K+ Sbjct: 247 ATDQYTLDLNRKAFNSILFRPRVL--VDVEIADTRTQMLGQDTSLPIFISP--AGMAKLA 302 Query: 73 ERINR-NLAIAAEKTKVAMA--------VGSQRVMFSDHNA---IKSFELRQYAPHTVLI 120 LA AA ++ + + S + + ++ + R L+ Sbjct: 303 HPEGECLLAKAAGQSNIIQMISTNASAPLPSIISSATSPSQPFFMQLYVDRNRPKTESLL 362 Query: 121 SNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--------- 166 + A+ + D +A A+ +I N Sbjct: 363 GKINSLGLKAIFVTVDAPAPGKREADERSRAEVEVASGISGGKIGSDNKGGGIGRSVGGF 422 Query: 167 -NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + I L +P+ LK V ++ D K G+ ++ GG + Sbjct: 423 IDPKLSWKDIEWLRQHTKLPIGLKGVQ---TAEDAMKAAKMGVDAIYLSNHGGRALDGSP 479 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 P +L C E + GG R G D++K++ LGA Sbjct: 480 ------------------PAMYTLLEMNKICPEIFKKCEVYIDGGCRRGTDVVKALCLGA 521 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL + VV AIE +R E +M LLG ++ +L Sbjct: 522 KGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKLDQL 567 >gi|225683159|gb|EEH21443.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 513 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 116/358 (32%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + VD S LG +S P +++ G Sbjct: 143 ADDEISLRENHSAFHKIWFRPRVL--VDVQNVDISSTMLGTPVSAPFYVTAAALGKLGHP 200 Query: 73 ERINRNLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA + A + + N I+ +L + Sbjct: 201 EG-EVCLTRAANTHNIIQMIPTLASCSFDEIIDARGPNQIQWLQLYVNKDRGI------- 252 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD-------------- 170 ++ Q G LF+ ++ Q + F+D Sbjct: 253 --------TKRIVQHAEKRGCKALFITVDAPQLGRREKDMRTKFSDRGSDVQASDTSSES 304 Query: 171 --------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S +P++LK V D+ ++ GI Sbjct: 305 SVDRSQGAARAISSFIDPSLSWTDIPWFQSITTMPIVLKGVQR---VDDVLRAVEVGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +D+ + R + + + GG+R G Sbjct: 362 VVLSNHGGRQLDFSPSSIELLADVMPELR------------RRGWQDRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G +++L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGVPGVERAMQLLKDELVMNMRLIGCSSIEQL 467 >gi|294657054|ref|XP_459365.2| DEHA2E00836p [Debaryomyces hansenii CBS767] gi|199432414|emb|CAG87560.2| DEHA2E00836p [Debaryomyces hansenii] Length = 615 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 118/338 (34%), Gaps = 47/338 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N F + L I ++D S E LG K P S+ + Sbjct: 265 DEVTMRENNNAFLRIFFNPKVL--IDTADIDMSTEMLGTKTDAPFYCSAAA---AAKLGH 319 Query: 75 INRNLAIA--AEKTKVAMAVGS-------QRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 + L+IA + + S + F+ + + F+L + T + A Sbjct: 320 PDGELSIADGCGSENIIQMISSAASYSFDEISDFAKKSTSQWFQLYVHKDRTSSYEMIDA 379 Query: 126 VQLNYDFGVQKAHQAVH--VLGADGLFLHLNPLQ-------EIIQPNGN-----TNFADL 171 G++ V + G L Q E + + Sbjct: 380 ---CEKKGIKAIFVTVDTPLFGRREKDLRFKVGQTDDDESDETSGGGDDFILSYRDAGLC 436 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I A ++P+++K V D+ L ++ + ++ GG + ++ Sbjct: 437 WDDIDKFKKATNLPIVIKGVQR---VEDVLLAIEHKVDGVVLSNHGGRQLDFARAPIEVL 493 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +D+ V ++ + NE + GG+R G D++K++ LGA GL FL Sbjct: 494 ADVMPVLRE------------KKLENEIEIYVDGGIRRGSDVIKALCLGAKGVGLGRSFL 541 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + VV A E L+ E M LLG ++++L Sbjct: 542 YANSAYGKKGVVKACELLKDEIARDMKLLGVSKLEDLK 579 >gi|190348942|gb|EDK41496.2| hypothetical protein PGUG_05594 [Meyerozyma guilliermondii ATCC 6260] Length = 547 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 66/352 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + + R + + +D S LG K S P I++ G E Sbjct: 224 DEITLRENHLSYHRIYFKPRIM--VDVTNIDLSTTMLGCKTSVPFYITATALGKLGHPEG 281 Query: 75 INRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 L AA K V + + F + + E Q+ +QL + Sbjct: 282 -EVVLTKAAAKEGVIQMIPTLASCSFDEIVDAATDEQTQF------------LQLYVNAD 328 Query: 134 VQKAHQAV---HVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD---- 170 + + V G GLF+ ++ Q +Q G+ Sbjct: 329 REICQKIVQHAEHRGIKGLFITVDAPQLGRREKDMRSKDIADLSHVQGEGDDADRSQGAA 388 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 IA S +P++LK V + D ++ + ++ GG Sbjct: 389 RAISSFIDTGLNWKDIAWFRSITKMPIILKGVQ---TVEDSLKAVEHEVDGIVLSNHGGR 445 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + +++ + ++ R + + GG+R D+LK+I L Sbjct: 446 QLEFSPPPIQVLAELMPILRE------------RKLDTKMEVYIDGGVRRASDVLKAIAL 493 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 GA G+ PFL + D VV A + L+ E I++M LLG + +L Sbjct: 494 GAKGVGIGRPFLYAMSTYGVDGVVRAFQILKDEMIMNMRLLGATTMDQLKRK 545 >gi|326470215|gb|EGD94224.1| mitochondrial cytochrome b2 [Trichophyton tonsurans CBS 112818] Length = 499 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 73/356 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N F R L + ++V LG +S P +++ G+ Sbjct: 135 CEDEMTMRENHTAFHKIWFRPRIL--VDVEKVCTRTTMLGTPVSAPFYVTATALGKLGHP 192 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + R A +A + V + +L + Sbjct: 193 DGEVCLTRASATHDVVQMIPTLASCSFDEIVDAKTDRQTQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 ++ + G GLF+ ++ Q + Sbjct: 245 -------TRRIVEHAEARGCKGLFITVDAPQLGRREKDMRSKFAEQGSNVQATTSTAATV 297 Query: 167 --------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + + + S +P+ LK V D+ +++GI Sbjct: 298 DRSQGAARAISSFIDPSLSWKDLPYFRSITKMPIALKGVQR---VDDVLRAVEAGIDAVV 354 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S +L +D+ + AR + + + GG+R D Sbjct: 355 LSNHGGRQLEYAPSSIELLADVMPALR------------ARGWDRKIEVYIDGGVRRATD 402 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ILK++ LGA G+ PFL + ++ V A++ L+ E ++M LLG + +L Sbjct: 403 ILKAVCLGAKGVGIGRPFLYAMSAYGTEGVEKAMQLLKDEMEMNMRLLGCTSIDQL 458 >gi|21618144|gb|AAM67194.1| glycolate oxidase, putative [Arabidopsis thaliana] Length = 363 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 125/363 (34%), Gaps = 73/363 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N + F R L + ++D S + LG +S P++I+ TG Sbjct: 30 AEDQHTLNENVQAFRRIMFRPRVL--VDVSKIDMSTKILGYPISAPIMIAP-TG------ 80 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 N LA +T A A + +M + + +FE + + V + V D Sbjct: 81 ---NHKLAHLEGETATAKAAAACNTIMIVSYMSSCTFEEIASSCNAVRFLQI-YVYKRRD 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADL---------- 171 Q +A G + L ++ ++I P NF L Sbjct: 137 ITAQVVKRA-EKAGFKAIVLTVDVPRLGRREADIKNKMISPQ-LKNFEGLFSTEVRPSKG 194 Query: 172 ----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 I L S ++P+L+K + L+ D +++G+ ++ Sbjct: 195 SGVQAFASRAFDASFSWKDIEWLRSITELPILVKGI---LTREDALKAVEAGVDGIIVSN 251 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + ++ + + GG+R G D+ K Sbjct: 252 HGGRQLDYSPATITVLEEV-----------------VQVVRGRIPVLLDGGVRRGTDVFK 294 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + P + A D V I+ L+ EF ++M L G + ++ N Sbjct: 295 ALALGAQAVLIGRPMIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDITRNHVRT 354 Query: 335 RHQ 337 ++ Sbjct: 355 ENE 357 >gi|304317475|ref|YP_003852620.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778977|gb|ADL69536.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 338 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 114/323 (35%), Gaps = 43/323 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 N K D W + + L + D S FLG K+ P+ + MTG ++ Sbjct: 47 ENIKALDRWKVKLKTLH--DVLKPDISTSFLGYKVKMPIFAAPMTGLKGNAGGYLSERDY 104 Query: 80 ----AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 A A + G I + S LG + Sbjct: 105 DTMAAEACKNVGTIFMSGDANDKDMYPAGIDA---------IKTTSVLGIPFSKPRTVDE 155 Query: 136 KAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSK--IALLSSAMDVPLLLKEVG 192 +A A + ++ +I + F S+ I + +++PL+LK + Sbjct: 156 IIEKARIAKEAGAIAFGVDVDGAGLIMMIRSGQFVGPKSRKEIEEIVKNIELPLILKGI- 214 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 ++ + E+ +SG + ++ GG E D+ DI A Sbjct: 215 --MTPEEAEIAAESGAKAIVVSNHGGRVLDFTEGTADVLPDI-----------------A 255 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKE 311 + + + + GG+R G+D+LK + LGA + P + A +A+ + + E Sbjct: 256 KAVGGKIEILVDGGVRTGIDVLKMLSLGAKAVLIGRPIMIAAHGGGREAIEFYFKKVSDE 315 Query: 312 FIVSMFLLGTKRVQ---ELYLNT 331 +M L G K ++ ELY + Sbjct: 316 LYQAMILTGCKDLKNVPELYKAS 338 >gi|207342528|gb|EDZ70269.1| YML054Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 362 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 108/324 (33%), Gaps = 55/324 (16%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 + +VD S + LG + P +S+ + + N V M Sbjct: 23 VDVRKVDISTDMLGSHVDVPFYVSATA-----LCKLGNPLEGEKDVARGCGQGVTKVPQM 77 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 S + E+ + AP I + + V LG LF+ ++ Sbjct: 78 ISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPS- 136 Query: 159 IIQPNGNT--NFAD-------------------------------LSSKIALLSSAMDVP 185 + Q + F++ I L +P Sbjct: 137 LGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLP 196 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +++K V + D+ + G+ ++ GG + ++ ++ Sbjct: 197 IVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMP--------- 244 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAA 304 + R ++ + GG+R G D+LK++ LGA GL PFL + + V A Sbjct: 245 ---ILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKA 301 Query: 305 IESLRKEFIVSMFLLGTKRVQELY 328 IE LR E +SM LLG + EL Sbjct: 302 IEILRDEIEMSMRLLGVTSIAELK 325 >gi|146413206|ref|XP_001482574.1| hypothetical protein PGUG_05594 [Meyerozyma guilliermondii ATCC 6260] Length = 547 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 66/352 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + + R + + +D S LG K S P I++ G E Sbjct: 224 DEITLRENHLSYHRIYFKPRIM--VDVTNIDLSTTMLGCKTSVPFYITATALGKLGHPEG 281 Query: 75 INRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 L AA K V + + F + + E Q+ +QL + Sbjct: 282 -EVVLTKAAAKEGVIQMIPTLASCSFDEIVDAATDEQTQF------------LQLYVNAD 328 Query: 134 VQKAHQAV---HVLGADGLFLHLNPLQ----------------EIIQPNGNTNFAD---- 170 + + V G GLF+ ++ Q +Q G+ Sbjct: 329 REICQKIVQHAEHRGIKGLFITVDAPQLGRREKDMRSKDIADLSHVQGEGDDADRSQGAA 388 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 IA S +P++LK V + D ++ + ++ GG Sbjct: 389 RAISSFIDTGLNWKDIAWFRSITKMPIILKGVQ---TVEDSLKAVEHEVDGIVLSNHGGR 445 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + +++ + ++ R + + GG+R D+LK+I L Sbjct: 446 QLEFSPPPIQVLAELMPILRE------------RKLDTKMEVYIDGGVRRASDVLKAIAL 493 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 GA G+ PFL + D VV A + L+ E I++M LLG + +L Sbjct: 494 GAKGVGIGRPFLYAMSTYGVDGVVRAFQILKDEMIMNMRLLGATTMDQLKRK 545 >gi|255101539|ref|ZP_05330516.1| dehydrogenase [Clostridium difficile QCD-63q42] Length = 340 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 120/317 (37%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ + ++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAAPVSGTILNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA-PHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNRGNGIVFIKPWNNSKIIEKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N QE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQFQE------NPFSPKTIDEIRELVESTRLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMAVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKIRN 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L G + V+++ Sbjct: 315 ELCETMILTGCQNVKDI 331 >gi|326481053|gb|EGE05063.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 499 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 73/356 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N F R L + ++V LG +S P +++ G+ Sbjct: 135 CEDEMTMRENHTAFHKIWFRPRIL--VDVEKVCTRTTMLGTPVSAPFYVTATALGKLGHP 192 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + R A +A + V + +L + Sbjct: 193 DGEVCLTRASATHDVVQMIPTLASCSFDEIVDAKTDRQTQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 ++ + G GLF+ ++ Q + Sbjct: 245 -------TRRIVEHAEARGCKGLFITVDAPQLGRREKDMRSKFAEQGSNVQATTSTAATV 297 Query: 167 --------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + + + S +P+ LK V D+ +++GI Sbjct: 298 DRSQGAARAISSFIDPSLSWKDLPYFRSITKMPIALKGVQR---VDDVLRAVEAGIDAVV 354 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S +L +D+ + AR + + + GG+R D Sbjct: 355 LSNHGGRQLEYAPSSIELLADVMPALR------------ARGWDRKIEVYIDGGVRRATD 402 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ILK++ LGA G+ PFL + ++ V A++ L+ E ++M LLG + +L Sbjct: 403 ILKAVCLGAKGVGIGRPFLYAMSAYGTEGVEKAMQLLKDEMEMNMRLLGCTSIDQL 458 >gi|134117736|ref|XP_772502.1| hypothetical protein CNBL1170 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255116|gb|EAL17855.1| hypothetical protein CNBL1170 [Cryptococcus neoformans var. neoformans B-3501A] Length = 569 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 115/346 (33%), Gaps = 56/346 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D N+K F+ R L + + D + LG+ S P+ IS G K+ Sbjct: 223 ATDQYTLDLNRKAFNSILFRPRVL--VDVEIADTRTQMLGQDTSLPIFISP--AGMAKLA 278 Query: 73 ERINR-NLAIAAEKTKVAMA--------VGSQRVMFSDHNA---IKSFELRQYAPHTVLI 120 LA AA ++ + + S + + ++ + R L+ Sbjct: 279 HPEGECLLAKAAGQSNIIQMISTNASAPLPSIISSATSPSQPFFMQLYVDRNRPKTESLL 338 Query: 121 SNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--------- 166 + A+ + D +A A+ +I N Sbjct: 339 GKINSLGLKAIFVTVDAPAPGKREADERSRAEVEVASGISGGKIGSDNKGGGIGRSVGGF 398 Query: 167 -NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + I L +P+ LK V ++ D K G+ ++ GG + Sbjct: 399 IDPKLSWKDIEWLRQHTKLPIGLKGVQ---TAEDAMKAAKMGVDAIYLSNHGGRALDGSP 455 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 P +L C E + GG R G D++K++ LGA Sbjct: 456 ------------------PAMYTLLEMNKICPEIFKKCEVYIDGGCRRGTDVVKALCLGA 497 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ PFL + VV AIE +R E +M LLG ++ +L Sbjct: 498 KGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKLDQL 543 >gi|85105154|ref|XP_961900.1| cytochrome b2, mitochondrial precursor [Neurospora crassa OR74A] gi|28923484|gb|EAA32664.1| cytochrome b2, mitochondrial precursor [Neurospora crassa OR74A] Length = 501 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 125/353 (35%), Gaps = 71/353 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L + ++VD S LG K+ P +++ G + Sbjct: 138 ADDEITLRENHAAFHRIWFRPKVL--VDVEKVDFSTTMLGTKVDIPFYVTATALGKLGHV 195 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA+K +A + + ++ + ++ +L + Sbjct: 196 EG-EVLLTRAAKKHNVVQMIPTLASCAFDEIMDAAEGDQVQWLQLYVNKDRAI------- 247 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------------------- 166 ++ + G LF+ ++ Q + Sbjct: 248 --------TERIIKHAEKRGCKALFITVDAPQLGRREKDMRVKFTDDGSNVQKGHETNRN 299 Query: 167 -----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + A I S +P++LK V D+ +++G++ ++ Sbjct: 300 EGAARAISSFIDPALSWKDIPWFQSVTKMPIILKGVQR---VEDVIKAVEAGVQGVVLSN 356 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG S ++ ++ V ++ G+ ++ + GG+R DILK Sbjct: 357 HGGRQLEFARSGIEVLAETMPVLRELGL------------EDKIEVYIDGGIRRATDILK 404 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA G+ PFL + D V A++ L+ E ++M L+G ++++L Sbjct: 405 ALCLGAKGVGIGRPFLYAMSAYGFDGVDRAMQLLKDEMEMNMRLIGATKIEDL 457 >gi|83771201|dbj|BAE61333.1| unnamed protein product [Aspergillus oryzae] Length = 517 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 122/362 (33%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F + L + + VD S LG K S P +++ G Sbjct: 154 ADDEITMRENHSAFHKIWFRPQIL--VDVENVDFSTTMLGAKTSIPFYVTATALGKLGNP 211 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + + +A + V + ++ +L + Sbjct: 212 EGEVVLTRAAHDHDVIQMIPTLASCSFDEIVDAKKGDQVQWLQLYVNKDRAI-------- 263 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 ++ Q G GLF+ ++ Q + F+D Sbjct: 264 -------TKRIVQHAEARGCKGLFITVDAPQLGRREKDMRSKFSDEGSNVQASGGDAVDR 316 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V D+ + G+ ++ Sbjct: 317 SQGAARAISSFIDPSLSWKDIPWFQSITKMPIVLKGVQR---VEDVLRAAEMGLDGVVLS 373 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ + ++ R + N+ + GG+R DIL Sbjct: 374 NHGGRQLDTAPSGIEVLAEVMPILRE------------RGWENKIEIFIDGGVRRSTDIL 421 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G ++ +L N +L Sbjct: 422 KALCLGARGVGIGRPFLYAMSTYGQAGVDRAMQLLKDEMEMNMRLIGATKISDL--NPSL 479 Query: 334 IR 335 I Sbjct: 480 ID 481 >gi|327278088|ref|XP_003223794.1| PREDICTED: hydroxyacid oxidase 2-like isoform 1 [Anolis carolinensis] Length = 356 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 125/343 (36%), Gaps = 51/343 (14%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN---KMIERIN 76 D N + +L R L V+ LG ++SFP+ I+ TG + E+ Sbjct: 36 DNNLMAYKRIYLRPRLL--RDVSAVNTKTTILGTEISFPVGIAP-TGFHKLFCPDGEQST 92 Query: 77 RNLAIAAEKTKVAMAVGSQRVM---FSDHNAIKSFE-------------LRQYAPHTVLI 120 A +A + V + ++ F+ +R+ Sbjct: 93 ARAGAAMNTCYIASTYSTCSVEEIAAATPAGLRWFQLYIHRRRDLSEQLVRRMEASGFQA 152 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVL------GADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 + A + ++ L +G F N E P + + + Sbjct: 153 LVVTADLPYTGKRREDMRNSLQFLSSMTLKNFEGAFEGENDHSEYGLPRDSIDPSVSWKD 212 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 IA L S +PL++K + L+ D EL ++ G++ ++ GG + + D Sbjct: 213 IAWLKSLTHLPLIIKGI---LTKEDAELAVRHGVQGIIVSNHGGRQLDGVPATIDAL--- 266 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKP 293 +E+ + + GG+R G D+LK++ +GA + P Sbjct: 267 --------------VEVIAAVQGKVEVYLDGGIRTGSDLLKALAIGAKCVFIGRPAIWGL 312 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A + ++ ++ L+ EF +SM L G + V E+ + L+R+ Sbjct: 313 AYKGEEGLIQVLKILKNEFSLSMALAGCRNVSEI--DQRLVRY 353 >gi|302653396|ref|XP_003018525.1| FMN-dependent dehydrogenase family protein [Trichophyton verrucosum HKI 0517] gi|291182176|gb|EFE37880.1| FMN-dependent dehydrogenase family protein [Trichophyton verrucosum HKI 0517] Length = 421 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 113/359 (31%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---NN 69 + + N F R L + ++V LG +S P +++ G + Sbjct: 54 CEDEMTMRENHTAFHKIWFRPRIL--VDVEKVCTRTTMLGTPVSAPFYVTATALGKLGHP 111 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + R A +A + V + +L + Sbjct: 112 DGEVCLTRASATHDVVQMIPTLASCSFDEIVDAKTDKQTQWLQLYVNKDRAI-------- 163 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 ++ + G GLF+ ++ Q + FAD Sbjct: 164 -------TRRIVEHAEARGCKGLFITVDAPQLGRREKDMRSKFADQGSSVQATTASSSSA 216 Query: 171 ---------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 + S +P+ LK V D+ +++GI Sbjct: 217 AAVDRSQGAARAISSFIDPSLSWKDLPYFRSITKMPIALKGVQR---VDDVLRAVEAGID 273 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG S +L +D+ + R + + + GG+R Sbjct: 274 AVVLSNHGGRQLEYAPSAIELLADVMPALR------------VRGWDRKIEVYIDGGVRR 321 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + ++ V A++ L+ E ++M LLG + +L Sbjct: 322 ATDILKAVCLGAKGVGIGRPFLYAMSAYGTEGVEKAMQLLKDEMEMNMRLLGCTSIDQL 380 >gi|238502675|ref|XP_002382571.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] gi|317148047|ref|XP_001822466.2| cytochrome b2 [Aspergillus oryzae RIB40] gi|220691381|gb|EED47729.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] Length = 500 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 122/362 (33%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F + L + + VD S LG K S P +++ G Sbjct: 137 ADDEITMRENHSAFHKIWFRPQIL--VDVENVDFSTTMLGAKTSIPFYVTATALGKLGNP 194 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R + + +A + V + ++ +L + Sbjct: 195 EGEVVLTRAAHDHDVIQMIPTLASCSFDEIVDAKKGDQVQWLQLYVNKDRAI-------- 246 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 ++ Q G GLF+ ++ Q + F+D Sbjct: 247 -------TKRIVQHAEARGCKGLFITVDAPQLGRREKDMRSKFSDEGSNVQASGGDAVDR 299 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V D+ + G+ ++ Sbjct: 300 SQGAARAISSFIDPSLSWKDIPWFQSITKMPIVLKGVQR---VEDVLRAAEMGLDGVVLS 356 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ + ++ R + N+ + GG+R DIL Sbjct: 357 NHGGRQLDTAPSGIEVLAEVMPILRE------------RGWENKIEIFIDGGVRRSTDIL 404 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G ++ +L N +L Sbjct: 405 KALCLGARGVGIGRPFLYAMSTYGQAGVDRAMQLLKDEMEMNMRLIGATKISDL--NPSL 462 Query: 334 IR 335 I Sbjct: 463 ID 464 >gi|119501134|ref|XP_001267324.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] gi|119415489|gb|EAW25427.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] Length = 495 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 114/340 (33%), Gaps = 61/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R L + VD LG S PL +S M + I Sbjct: 145 DANKSCFDRIWFRPRVL--RNVRSVDSRTRILGVDCSMPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKS-------FELRQYAPHTVLI------ 120 +A A E+ + V + D A S + R + L+ Sbjct: 198 ECAIARACERKGIMQGVSNNSSYTLDQLKEAAPSANFFFQLYVNRDRSKSAALLHQCSAN 257 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGN---TNFADL----- 171 N+ A+ + D +A + AD L + + P Q G A Sbjct: 258 PNVKAIFVTVDAAWPGKREADERVKADENLSVPMAPAQAKNDKKGGGLGRVMAGFIDPGL 317 Query: 172 -SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 318 TWDDLVWVRKHTHLPVCLKGV---MSADDAILAMQAGLDGILLSNHGGRNLDTSP----- 369 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ ++L C E + G+R G DILK+I LGA+ G+ Sbjct: 370 -------------PSIVTLLELHKRCPEIFDKMEIYVDSGIRRGTDILKAICLGATAVGM 416 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + V I+ ++ E +M G + E Sbjct: 417 GRSMLFATNYGQEGVEHLIDIMKDELETAMRNNGITSLDE 456 >gi|115398229|ref|XP_001214706.1| hypothetical protein ATEG_05528 [Aspergillus terreus NIH2624] gi|114192897|gb|EAU34597.1| hypothetical protein ATEG_05528 [Aspergillus terreus NIH2624] Length = 536 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 115/340 (33%), Gaps = 61/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R L + EVD LG S PL +S M + I Sbjct: 144 DANKSCFDRIFFRPRVL--RNVREVDTKTNILGVDCSLPLFVSPAA-----MAKLIHPDG 196 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKS-------FELRQYAPHTVLI------ 120 +A A E + + + D +A + + R L+ Sbjct: 197 ECAIAKACEAKGIMQGISNNSSYTMDELRSAAPTASFFFQLYVNRDREKSAALLRQCSAN 256 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL----- 171 N+ A+ + D +A + AD L + ++P + G A Sbjct: 257 PNIKAIFVTVDAAWPGKREADERVKADESLSVPMSPSKAKNDKKGGGLGRVMAGFIDPGL 316 Query: 172 -SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 317 TWEDLVWVRKHTHLPVCLKGV---MSADDAILAMEAGLDGILLSNHGGRNLDTSP----- 368 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ ++L C E + G+R G DILK+I LGA+ G+ Sbjct: 369 -------------PSIITLLELHRRCPEIFDRMEIYVDSGIRRGTDILKAISLGATAVGM 415 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + V I+ ++ E +M G + + Sbjct: 416 GRSMLFATNYGQEGVEHLIDIMKDELETAMRNNGITSLDQ 455 >gi|255307413|ref|ZP_05351584.1| dehydrogenase [Clostridium difficile ATCC 43255] Length = 340 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 120/317 (37%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ + ++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAAPVSGTILNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA-PHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNRGNGIVFIKPWNNSKIIDKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N QE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQFQE------NPFSPKTIDEIRELVESTRLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMAVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKVRN 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L G + V+++ Sbjct: 315 ELCETMILTGCQNVKDI 331 >gi|295672097|ref|XP_002796595.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226283575|gb|EEH39141.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 513 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 117/358 (32%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + VD + LG +S P +++ G Sbjct: 143 ADDEISLRENHSAFHKIWFRPRVL--VDVQNVDITSTMLGTPVSAPFYVTAAALGKLGHP 200 Query: 73 ERINRNLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA + A + V N I+ +L + Sbjct: 201 EG-EVCLTRAANTHNIIQMIPTLASCSFDEIVDARGPNQIQWLQLYVNKDRGI------- 252 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD-------------- 170 ++ Q G LF+ ++ Q + F+D Sbjct: 253 --------TKRIVQHAEKRGCKALFITVDAPQLGRREKDMRTKFSDRGSDVQASDANSES 304 Query: 171 --------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S +P+++K V D+ +++GI Sbjct: 305 SVDRSQGAARAISSFIDPSLSWADIPWFQSITTMPIVIKGVQR---VDDVLRAVEAGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +D+ + R + + + GG+R G Sbjct: 362 VVLSNHGGRQLDFSPSSIELLADVMPELR------------RRGWQDRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G +++L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGVPGVERAMQLLKDELVMNMRLIGCSSIEQL 467 >gi|126700002|ref|YP_001088899.1| dehydrogenase [Clostridium difficile 630] gi|115251439|emb|CAJ69272.1| Alpha-hydroxy acid dehydrogenase,FMN-dependent [Clostridium difficile] Length = 340 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 120/317 (37%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ + ++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAAPVSGTILNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA-PHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNRGNGIVFIKPWNNSKIIDKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N QE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQFQE------NPFSPKTIDEIRELVESTRLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMAVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKSVKGKITILVDGGVRTGVDVVKMLGLGADAVLMGRPFVTASFGGGLDGVEFFIEKVRN 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L G + V+++ Sbjct: 315 ELCETMILTGCQNVKDI 331 >gi|302889407|ref|XP_003043589.1| hypothetical protein NECHADRAFT_88152 [Nectria haematococca mpVI 77-13-4] gi|256724506|gb|EEU37876.1| hypothetical protein NECHADRAFT_88152 [Nectria haematococca mpVI 77-13-4] Length = 377 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 113/351 (32%), Gaps = 64/351 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ +D + + R L +IS +D S G K+ FP S + + Sbjct: 38 AMDLITLHENESAYDRYRIRPRVLRDISV--IDTSTTIFGTKVKFPFGFSPTA---MQQL 92 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A A V M + + + K + P+ + +S L N Sbjct: 93 AHPDGEEGTAKATATVGVPMGLSNYSTI----ELEKVISHGKGNPYVMQMSLL----KNK 144 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPN-----GNTNFA 169 D +Q +A G L + L+ Q + PN TN Sbjct: 145 DAMIQMIKRA-EKAGFKALLVTLDAPYLGRRLNEFRNKFSVPQGMEYPNLFPGVDVTNLE 203 Query: 170 DLSSKIALLSS-AMD--VPLLLKEVG---CGL---SSMDIELGLKSGIRYFDIAGRGGTS 220 D +A +P K G ++ D EL +K G+ ++ GG Sbjct: 204 DGDESMAYDCGLEWPQLMPFFRKHTKMEIWGKGIYTADDAELAIKHGLDGIVVSNHGGRQ 263 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + D+ ++ + GG+R G DI K++ LG Sbjct: 264 LDSVPASLDVLREVVPI-----------------AKGHIPIAVDGGIRRGTDIFKALALG 306 Query: 281 ASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A P A + V A+ L EF M L G K V E+ + Sbjct: 307 ADFCLAGRPAIWGLAYNGEKGVELALNLLYDEFKTCMALAGCKNVNEITKD 357 >gi|260825500|ref|XP_002607704.1| hypothetical protein BRAFLDRAFT_82849 [Branchiostoma floridae] gi|229293053|gb|EEN63714.1| hypothetical protein BRAFLDRAFT_82849 [Branchiostoma floridae] Length = 358 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 128/320 (40%), Gaps = 46/320 (14%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG----SQ 95 D + LG+K+ P+ IS TG + + + + AA V M + S Sbjct: 57 DVSTRDLTTTILGEKVDMPIGISP-TGLHGLAWQDGSLCMMKAAASMNVCMTLPTFATST 115 Query: 96 RVMFSD--HNAIKSFEL-----RQYAPHTVL-ISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 D +A+K F+L R++ + + LG L V + D Sbjct: 116 PKELVDVAPSALKWFQLYVTPEREFMKRLIQHVETLGYKALVITIDVPFTGNRRPMTR-D 174 Query: 148 GLFL--HL---NPLQEIIQ----PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + HL N +E+ + P T+ + I S +P++LK + ++S Sbjct: 175 GFKVPPHLKVSNFPEELRRKYAFPANATDESLSWKDIKWFQSVTSMPIVLKGI---MTSE 231 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D EL ++ G++ ++ GG + + ++ ++ R Sbjct: 232 DAELAVQHGVQAVWVSNHGGRQLDSVPAAIEVLPEV-----------------VRAVRGR 274 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + GG+R G D++K++ LGA L P A + V ++ L+ E ++M Sbjct: 275 VEVYMDGGVRQGTDVMKALALGARAVFLGRPPIWGLAHSGEEGVRHVLQILKDELSLAMA 334 Query: 318 LLGTKRVQELYLNTALIRHQ 337 L G K ++++ N +L++HQ Sbjct: 335 LSGCKEIKDI--NRSLLQHQ 352 >gi|15231792|ref|NP_188031.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|145332391|ref|NP_001078152.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|122195548|sp|Q24JJ8|GLO3_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=AtGLO3; Short=GOX 3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|90093298|gb|ABD85162.1| At3g14150 [Arabidopsis thaliana] gi|332641956|gb|AEE75477.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] gi|332641957|gb|AEE75478.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] Length = 363 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 125/363 (34%), Gaps = 73/363 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N + F R L + ++D S + LG +S P++I+ TG Sbjct: 30 AEDQHTLNENVQAFRRIMFRPRVL--VDVSKIDMSTKILGYPISAPIMIAP-TG------ 80 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 N LA +T A A + +M + + +FE + + V + V D Sbjct: 81 ---NHKLAHPEGETATAKAAAACNTIMIVSYMSSCTFEEIASSCNAVRFLQI-YVYKRRD 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADL---------- 171 Q +A G + L ++ ++I P NF L Sbjct: 137 ITAQVVKRA-EKAGFKAIVLTVDVPRLGRREADIKNKMISPQ-LKNFEGLFSTEVRPSKG 194 Query: 172 ----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 I L S ++P+L+K + L+ D +++G+ ++ Sbjct: 195 SGVQAFASRAFDASFSWKDIEWLRSITELPILVKGI---LTREDALKAVEAGVDGIIVSN 251 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + ++ + + GG+R G D+ K Sbjct: 252 HGGRQLDYSPATITVLEEV-----------------VQVVRGRIPVLLDGGVRRGTDVFK 294 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + P + A D V I+ L+ EF ++M L G + ++ N Sbjct: 295 ALALGAQAVLIGRPIIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDITRNHVRT 354 Query: 335 RHQ 337 ++ Sbjct: 355 ENE 357 >gi|170098374|ref|XP_001880406.1| predicted protein [Laccaria bicolor S238N-H82] gi|164644844|gb|EDR09093.1| predicted protein [Laccaria bicolor S238N-H82] Length = 506 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 115/351 (32%), Gaps = 60/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN-NKM 71 + N + R L + +VD S + LG K S P+ I++ G Sbjct: 138 ADDEITTRENHAAYHRVWFRPRIL--VDVTKVDWSTKILGYKSSMPVYITATALGKLGHP 195 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 +N L AA K V + + D + P V L V + Sbjct: 196 DGELN--LTRAAAKHGVIQMIPTLASCSFDEL------VDAARPGQVQFLQL-YVNKDRS 246 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------------FADL------ 171 + A G GLF+ ++ Q + + Sbjct: 247 ITKRLVQHA-EKRGIRGLFITVDAPQLGRREKDMRMKFEAEDPSEVSKAGSRGVDRSQGA 305 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + S +PL+LK V D G+ ++ GG Sbjct: 306 ARAISSFIDPGLNWKDLEWFRSITKMPLILKGVQR---WEDALKAYDLGLAGVVLSNHGG 362 Query: 219 TSWSRIESHRDLESDIGIVFQ-DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 S ++ ++ + G+ P + Q GG+R D++K+I Sbjct: 363 RQLDFARSGVEVLVEVTEYLKRHRGLTFP---------NEKFQLFVDGGVRRATDVIKAI 413 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA+ G+ PFL + S+ V A++ L EF ++M LLG + V +L Sbjct: 414 ALGATAVGIGRPFLYAFSSYGSEGVERALQILHDEFEMNMRLLGARSVADL 464 >gi|321264494|ref|XP_003196964.1| cytochrome b2, mitochondrial precursor [Cryptococcus gattii WM276] gi|317463442|gb|ADV25177.1| Cytochrome b2, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 569 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 116/351 (33%), Gaps = 66/351 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D N+K F+ R L + + D + LG+ S P+ IS G K+ Sbjct: 223 ATDQYTLDLNRKAFNSILFRPRVL--VDVEIADTRTQMLGQDTSLPIFISP--AGMAKLA 278 Query: 73 ERINR-NLAIAAEKTKVAMA--------VGSQRVMFSDHNA---IKSFELRQYAPHTVLI 120 LA AA ++ V + S + + ++ + R + L+ Sbjct: 279 HPEGECLLAKAAGQSNVIQMISTNASAPLPSIISSATSPSQSFFMQLYVDRNRSKTESLL 338 Query: 121 SNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---- 171 + A+ + D +A A+ + I ++ Sbjct: 339 QKINSLGLKAIFVTVDAPAPGKREADERSRAE-----VEVASGISGGKIGSDSKGGGIGR 393 Query: 172 -----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 I L +P+ LK V ++ D K G+ ++ GG + Sbjct: 394 SVGGFIDPKLSWKDIEWLRQHTKLPIGLKGVQ---TAEDAMKAAKMGVDAIYLSNHGGRA 450 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKS 276 P +L C E + GG R G D++K+ Sbjct: 451 LDGSP------------------PAMYTLLEMNKICPEVFKKCEVYIDGGCRRGTDVVKA 492 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ PFL + VV AIE +R E +M LLG ++ +L Sbjct: 493 LCLGAKGVGMGRPFLYSLTYGEEGVVHAIEIMRDEIETTMRLLGVTKLDQL 543 >gi|291398148|ref|XP_002715438.1| PREDICTED: hydroxyacid oxidase 2 [Oryctolagus cuniculus] Length = 395 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 116/342 (33%), Gaps = 48/342 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N F L R L EVD G+++S P+ I+ TG + Sbjct: 71 ADEGITRDDNVAAFKKIRLRPRYL--RDVSEVDLRTTIQGEEISAPICIAP-TGFHCLAW 127 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ-RVMFSD-----HNAIKSFEL-----RQYAPHTVLIS 121 + A AA+ S D ++ F+L RQ + Sbjct: 128 PDGEMSTARAAQAAGTCYITSSYASCSLEDIVTTAPRGLRWFQLYVHPERQLNKQLIQRV 187 Query: 122 N-LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-----------A 169 LG L V + + L L +N +Q I N + Sbjct: 188 EALGFRALVITVDVPILGNRRQDIR-NQLNLMMNLMQASIHSTKERNSIPHLQMSPISTS 246 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ S +P++LK + L+ D EL +K + ++ GG + + D Sbjct: 247 LCWNDLSWFQSMTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDGVAASID 303 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 +++ + + GG+R G D+LK++ LGA L P Sbjct: 304 ALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAKCVFLGRP 346 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A V + L+ E +SM L G + V E+ + Sbjct: 347 ILWGLAYKGEHGVKEVLNILKNELHISMALTGCRSVTEISRD 388 >gi|261189059|ref|XP_002620942.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239591946|gb|EEQ74527.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239609220|gb|EEQ86207.1| cytochrome b2 [Ajellomyces dermatitidis ER-3] gi|327355881|gb|EGE84738.1| cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 513 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 115/358 (32%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNK-- 70 + + N F R L + + VD S LG +S P +S+ G Sbjct: 143 ADDEITLRENHSAFHKVWFRPRIL--VDVENVDISTTMLGSPVSVPFYVSATALGKLGHP 200 Query: 71 -----MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 + N + + +A + V + ++ +L Sbjct: 201 EGEVCLTRASNTH-NVIQMIPTLASCSFDEIVDARGPDQVQWLQL--------------Y 245 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD-------------- 170 V + + + A G LF+ ++ Q + F+D Sbjct: 246 VNKDRNITKRIVQHAQQR-GCKALFVTVDAPQLGRREKDMRSKFSDRGSAVQAADGESTS 304 Query: 171 --------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 I S D+P++LK V D+ ++ GI Sbjct: 305 SIDRSQGAARAISSFIDPSLSWKDIPWFQSITDMPIVLKGVQR---VDDVLRAVEMGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +++ + R + + + GG+R Sbjct: 362 VVLSNHGGRQLDFAPSAIELLAEVMPELRK------------RGWQDRIEVYIDGGVRRA 409 Query: 271 VDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL V A++ L+ E +++M L+G + +L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMGAYGVPGVERAMQLLKDEMVMNMRLIGCSSIDQL 467 >gi|291229432|ref|XP_002734680.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 361 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 123/350 (35%), Gaps = 61/350 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GG 67 + + N F ++ R L VD S LG+ L FP+ I+ GG Sbjct: 35 AEITLKENSTAFSRLKILPRVLK--DVSNVDLSTSILGQHLDFPVCIAPSAFHKLVSPGG 92 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFEL-----RQYAPH 116 A AA M + + ++V + +K F+L R++ + Sbjct: 93 ELDT--------ANAANAMGTCMVLSNVTTTTLEKVASLYPDTLKWFQLYIWECREFTVN 144 Query: 117 TVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFL-HLNPLQEI----IQPNGNTNF 168 + + ++ + D V+ + + + HL QE+ P + Sbjct: 145 LIRRAETAGFKSLVVTVDSSVKGNRRGHRFTFPPNIEVVHL--PQELKRSGRSPCSLADP 202 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + IA + S +P++LK + LS D L ++ + ++ GG + + Sbjct: 203 SLTWEFIAWMRSVTKLPIVLKGI---LSPEDALLAVEHKVDGIIVSNHGGRQLDTVPATI 259 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ I + GG+R G D+ K++ +GA + Sbjct: 260 EMLPHI-----------------IAAVRGRIEVYVDGGIRTGTDVFKALAMGARAVFIGR 302 Query: 289 PFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P + D ++ L+ E + +M L G ++ E+ + + HQ Sbjct: 303 PIIYGLKYAGGDGAKQVLQILKDELMRTMALSGCSKISEIKPSHVV--HQ 350 >gi|310792133|gb|EFQ27660.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 497 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 125/360 (34%), Gaps = 71/360 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F + L + ++VD + LG K+ P +++ G Sbjct: 134 ADDEITMRENHGAFHRIWFRPQIL--VDVEKVDFTTTMLGTKVDMPFYVTATALGKLGHP 191 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ R R + +A + + ++ + ++ +L V Sbjct: 192 EGEVLLTRAARKHNVIQMIPTLASCSFDELMDAAEGDQVQWMQL--------------YV 237 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 + + + A G GLF+ ++ Q + Sbjct: 238 NKDREITKKIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFTDPGANVQSGQATDQSQ 296 Query: 167 ----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + A I S ++P++LK V D+ +++G++ ++ Sbjct: 297 GAARAISSFIDPALSWKDIPWFKSITNMPIILKGVQR---VEDVIKAIEAGVQGVVLSNH 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S ++ ++ V + G+ N + GG+R DI+K+ Sbjct: 354 GGRQLDFARSGIEVLAETMPVLRRMGL------------ENAIEIYIDGGVRRATDIIKA 401 Query: 277 IILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGA G+ PFL D V A++ LR E ++M L+G V +L N +L+ Sbjct: 402 LCLGAKGVGIGRPFLYAMSGYGFDGVDRAMQLLRDEMEMNMRLIGCTSVDQL--NPSLVD 459 >gi|291234696|ref|XP_002737281.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 359 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 118/347 (34%), Gaps = 60/347 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N + F + L R L ++ D S LG+++ P+ I TG + + Sbjct: 44 ADEEVTLRDNSRAFLRYKLRPRVLRNVATR--DLSTTILGREIDMPICIGP-TGLHTEA- 99 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNYD 131 A VA I+ F + P I + N D Sbjct: 100 ----HKDGEVATAKGVADLNTCYVPSIYSGRLIEDIFPVPTKGPKWQQIF----IWKNRD 151 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------PLQEIIQPNG-------NTNF 168 +A GAD L L + PL + + + Sbjct: 152 MTRDVIKRA-EDAGADALVLTTDVPAPGNRLGLRRLPPGPLPKFVNLERYGPTEGITMDA 210 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + I L S +P++LK + L+ D L + GI ++ GG + + Sbjct: 211 SVTWEYITWLKSITKLPIVLKGI---LTEEDAVLAAEYGINGIIVSNNGGRQLDTVPASI 267 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ I A+ N + G+R G D+LK++ GA + Sbjct: 268 DVLERI-----------------AKSVGNTIEIYMDSGIRTGTDVLKALAFGAKAVFIGR 310 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 P + A+ + V ++ L+ E ++M L G + + ++ +LI Sbjct: 311 PIVYGLALQGEEGVSQVLQILKDELSLAMALSGCRSIGDI--TPSLI 355 >gi|303321393|ref|XP_003070691.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110387|gb|EER28546.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 504 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 118/362 (32%), Gaps = 70/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N F R L + + VD S LG +S P +++ G+ Sbjct: 137 ADDEITMRENHSAFHKIWFRPRIL--VDVENVDISSTMLGAPVSVPFYVTATALGKLGHP 194 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + + + A +A + V + + +L V Sbjct: 195 EGEICLTKAAATHDVIQMIPTLASCSFDEIVDAAMDKQTQWLQL--------------YV 240 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 + + + A G GLF+ ++ Q + F+D Sbjct: 241 NKDREVTRKIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDPGTDVQRTDSNVDRS 299 Query: 171 ---------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 I S +P+ LK V D ++ G+ ++ Sbjct: 300 QGAARAISSFIDPSLSWKDIPWFQSITKMPIALKGVQR---VDDALRAVELGVPAIVLSN 356 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG S +L +++ + AR + N + GG+R DI+K Sbjct: 357 HGGRQLEFAPSAVELLAEVMPALR------------ARGWENRIEVYIDGGIRRATDIIK 404 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA G+ PFL + V A++ L+ E +++M LLG V +L + I Sbjct: 405 ALCLGAKGVGIGRPFLYAMSTYGVPGVERAMQLLKDEMVMNMRLLGCTSVDQLTPDLLDI 464 Query: 335 RH 336 R Sbjct: 465 RG 466 >gi|78044740|ref|YP_360153.1| FMN-dependent family dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77996855|gb|ABB15754.1| dehydrogenase, FMN-dependent family [Carboxydothermus hydrogenoformans Z-2901] Length = 340 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 44/321 (13%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N + + L R + E D S E G K+S P+ + +TG M + Sbjct: 43 KAFQENLRALSRYKLNLRTIHG--VKEPDLSFELFGVKVSMPVFAAPITGTTYNMGGALT 100 Query: 77 RNLAIAAEKTKVAMAVGSQRVMF-------SDHNAIKS--FELRQYAPHTVLISNLGAVQ 127 E+ +A+ GS +D S +++ + I A Sbjct: 101 D------EEYSLAVVEGSLLAGTLAFTGDGADPTMYGSGLKAIKKVEGKGIPIIKPRA-- 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPL 186 + +++ +A GA + + ++ + G ++ + ++ +P Sbjct: 153 --QEEIIKRIREA-EETGAIAVGVDIDGAGLLTMALKGQPVSPKTLEEVMEIVNSTRLPF 209 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + ++ + EL +++G + ++ GG + D+ +I Sbjct: 210 ILKGI---MTPDEAELAVQAGAKAIVVSNHGGRTLDETPGAADVLPEIAA---------- 256 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAI 305 + +A GG+R+GVD+LK + LGA + P + A + V + Sbjct: 257 -------RVKGKITILADGGVRSGVDVLKLLALGADGVLIGRPIIVAAFGGGAEGVKIYL 309 Query: 306 ESLRKEFIVSMFLLGTKRVQE 326 E ++KE +M L G RV E Sbjct: 310 EKIKKELREAMLLTGVARVTE 330 >gi|119180573|ref|XP_001241744.1| hypothetical protein CIMG_08907 [Coccidioides immitis RS] Length = 504 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 118/362 (32%), Gaps = 70/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N F R L + + VD S LG +S P +++ G+ Sbjct: 137 ADDEITMRENHSAFHKIWFRPRIL--VDVENVDISSTMLGAPVSVPFYVTATALGKLGHP 194 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + + + A +A + V + + +L V Sbjct: 195 EGEICLTKAAATHDVIQMIPTLASCSFDEIVDAAMDKQTQWLQL--------------YV 240 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------- 170 + + + A G GLF+ ++ Q + F+D Sbjct: 241 NKDREVTRKIVQHA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDPGTDVQRTDSNVDRS 299 Query: 171 ---------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 I S +P+ LK V D ++ G+ ++ Sbjct: 300 QGAARAISSFIDPSLSWKDIPWFQSITKMPIALKGVQR---VDDALRAVELGVPAIVLSN 356 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG S +L +++ + AR + N + GG+R DI+K Sbjct: 357 HGGRQLEFAPSAVELLAEVMPALR------------ARGWENRIEVYIDGGIRRATDIIK 404 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA G+ PFL + V A++ L+ E +++M LLG V +L + I Sbjct: 405 ALCLGAKGVGIGRPFLYAMSTYGVPGVERAMQLLKDEMVMNMRLLGCTSVDQLTPDLLDI 464 Query: 335 RH 336 R Sbjct: 465 RG 466 >gi|169773829|ref|XP_001821383.1| cytochrome b2 [Aspergillus oryzae RIB40] gi|238491848|ref|XP_002377161.1| mitochondrial cytochrome b2-like, putative [Aspergillus flavus NRRL3357] gi|83769244|dbj|BAE59381.1| unnamed protein product [Aspergillus oryzae] gi|220697574|gb|EED53915.1| mitochondrial cytochrome b2-like, putative [Aspergillus flavus NRRL3357] Length = 495 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 115/341 (33%), Gaps = 63/341 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R L + VD + LG S PL +S M + I Sbjct: 145 DANKSCFDRIWFRPRVLK--NVRSVDTKTKILGIDSSLPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----- 120 +A A + + S ++ + + R L+ Sbjct: 198 ECAIARACGNHGIMQGI-SNNSSYTMEELRDTAPSASFFFQLYVNRDREKSAALLRQCSA 256 Query: 121 -SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL---- 171 N+ A+ + D +A + AD GL + + P + G A Sbjct: 257 NPNVKAIFVTVDAAWPGKREADERVKADEGLSVPMAPSKAKNDNKGGGLGRVMAGFIDPG 316 Query: 172 --SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 317 LTWEDLVWVRQHTHLPVCLKGV---MSADDAMLAMEAGLDGILLSNHGGRNLDTSP---- 369 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 P+ ++L + C E + G+R G DILK+I LGA+ G Sbjct: 370 --------------PSIITLLELQKRCPEIFDKMEIYVDSGIRRGTDILKAICLGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + L + V I+ ++ E +M +G + E Sbjct: 416 MGRSMLFATNYGQEGVEHLIDIMKDELETAMRNIGITTLDE 456 >gi|315040323|ref|XP_003169539.1| hypothetical protein MGYG_08444 [Arthroderma gypseum CBS 118893] gi|311346229|gb|EFR05432.1| hypothetical protein MGYG_08444 [Arthroderma gypseum CBS 118893] Length = 495 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 73/356 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N F R L + ++V LG +S P +++ G+ Sbjct: 135 CEDEMTMRENHTAFHKIWFRPRIL--VDVEQVCTRTTMLGTPVSVPFYVTATALGKLGHP 192 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + R A +A + V + + +L + Sbjct: 193 DGEVCLTRAAATHDVVQMIPTLASCSFDEIVDAKTDSQTQWLQLYVNKDRAI-------- 244 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 ++ + G GLF+ ++ Q + Sbjct: 245 -------TRRIVEHAEARGCRGLFITVDAPQLGRREKDMRSKFAEQGSSVQATATATSTV 297 Query: 167 --------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + + + S +P+ LK V D+ +++GI Sbjct: 298 DRSQGAARAISSFIDPSLTWKDLPYFRSLTRMPIALKGVQR---VDDVLRAVEAGIDAVV 354 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S +L +D+ + AR + + + GG+R D Sbjct: 355 LSNHGGRQLEYAPSAIELLADVMPALR------------ARGWDRKIEVYIDGGVRRATD 402 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ILK++ LGA G+ PFL + + V A++ L+ E ++M LLG + +L Sbjct: 403 ILKAVCLGAKGVGIGRPFLYAMSAYGTAGVEKAMQLLKDEMEMNMRLLGCTSIDQL 458 >gi|312621372|ref|YP_004022985.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] gi|312201839|gb|ADQ45166.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] Length = 338 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 117/315 (37%), Gaps = 38/315 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 N + L R + E D VE GKKL+ P+L + +TG + M +I+ Sbjct: 47 ANVEALSKIRLNLRTIH--DAKEPDICVEMFGKKLAMPILAAPITGSSYNMGGKISEEDF 104 Query: 79 ----LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + E + M +F + +R H + I + D + Sbjct: 105 IQMVISGSKEAGTIGMCGDGGDPVFYESGLK---AIRNENGHGIAIIKPRSN----DQII 157 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 ++ +A GA + + ++ I G ++ L S+ +P +LK + Sbjct: 158 KRIKEA-EDAGALAVGIDIDGAGLITMALMGQPIGPKTKEELKALISSSSLPFILKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ + E+ L+ G ++ GG ++ I Sbjct: 215 -MTEDEAEIALEVGASAIVVSNHGGRILDHTPGVAEVLPRIAE----------------- 256 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + A GG+R+GVD+LK + LGA + P + A + V +E + +E Sbjct: 257 KVKGKILIFADGGVRSGVDVLKYLALGADAVLVGRPIIHAAFGGGKEGVKLILEKMAQEL 316 Query: 313 IVSMFLLGTKRVQEL 327 +M L G K ++ + Sbjct: 317 KQAMILTGCKDIKSI 331 >gi|307244419|ref|ZP_07526530.1| class II glutamine amidotransferase [Peptostreptococcus stomatis DSM 17678] gi|306492238|gb|EFM64280.1| class II glutamine amidotransferase [Peptostreptococcus stomatis DSM 17678] Length = 338 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 115/322 (35%), Gaps = 52/322 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N D L R + + E D +++ GK+L P++ + +TG M + Sbjct: 47 ENVAALDRIKLNMRVIHK--VVEPDMTIDLFGKELDLPVMAAPITGTILNMGGLVTEKEY 104 Query: 81 I------AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 I AM + + + E+ + ++ N + Sbjct: 105 IEPVIEGCKNMGTYAMVGDTAVPQI----LLDNLEVMEKYDGAGIVFIKPWENGNIIEKI 160 Query: 135 QKAHQA--------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +KA +A + G L LH P+ FA +I L ++ D+P Sbjct: 161 KKAEKAGALAVGVDLDACGLVTLKLHGTPV-----------FAKNIDEIRELVNSTDLPF 209 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + ++ + + +++G+ ++ GG D+ S+I Sbjct: 210 ILKGI---MTPDEALMAVEAGVYGIVVSNHGGRVQDYTPGTADVLSEI------------ 254 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAI 305 A+ + GG+R GVD+LK + LGA + PF+ + V I Sbjct: 255 -----AKAVDGRIKVFVDGGIRTGVDVLKMLALGADACLIGRPFITASFGGQTQGVEMYI 309 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 L+ + +M L G + + + Sbjct: 310 SRLKADLEAAMVLTGCQDLASI 331 >gi|330794910|ref|XP_003285519.1| hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum] gi|325084522|gb|EGC37948.1| hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum] Length = 387 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 120/346 (34%), Gaps = 57/346 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMI 72 + N+ F L+ R+L ++ +V + G+ LS P++I+ +M + + Sbjct: 58 DQSTLAENENAFTRIKLVPRSL--VNVSKVSTKTKIYGQDLSTPIMIAPWAM-----QRM 110 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTV- 118 N L AA++ M + S + + S F+ R+ + V Sbjct: 111 AHPNGELDTLEAAKEFGTIMTLSSLSTTSVEDVSKHSNGNPGWFQLYVFKDRKVSEDLVK 170 Query: 119 LISNLGAVQLNYD-----FGVQKAHQAVHVLGADGLFL----HL---NPLQEIIQPNGNT 166 + LG L G + A +GLFL HL N + Q Sbjct: 171 RVEKLGYKALVVTVDTPFLGKRDADYKNQFKLPNGLFLKNFEHLLLSNLEGGLNQYMATM 230 Query: 167 NFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 L + L S +P+L+K V + D LK G ++ GG Sbjct: 231 IDPGLTWKDLEWLRSITTLPVLVKGV---MCPQDAAEALKHGADGIIVSNHGGRQLDTSP 287 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S ++ I + + I GG+R G DILK++ GA+ Sbjct: 288 STIEVLPAIS-----------------KVVQGKIPLILDGGIRRGTDILKALAFGANAVL 330 Query: 286 LASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + D V+ + L E +SM G + E+ N Sbjct: 331 IGRPVIWGLSCGGKDGVLRVLNLLNSELQLSMAFTGMNSIHEITEN 376 >gi|260803693|ref|XP_002596724.1| hypothetical protein BRAFLDRAFT_285580 [Branchiostoma floridae] gi|229281983|gb|EEN52736.1| hypothetical protein BRAFLDRAFT_285580 [Branchiostoma floridae] Length = 361 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 112/315 (35%), Gaps = 51/315 (16%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVG-SQR 96 D S LG+ + P+ +S M + N +L A AA + K M S Sbjct: 57 DVSARDLSTTLLGRAVDMPIGVSPM---GALGLFAPNGDLCAARAAARFKTCMISSTSSN 113 Query: 97 VMFSD-----HNAIKSFELRQYAPH-------TVLISNLGAVQLNYDFGVQKAHQAVHVL 144 D +K F+L Q P + G L + L Sbjct: 114 STLEDVMTSSPEGLKWFQL-QIRPDRELTKTMVQRVERAGYRALVVTVDASYVGRRYQEL 172 Query: 145 GADG-LFLHLNPL---QEIIQPNGNTNFAD-------LSSKIALLSSAMDVPLLLKEVGC 193 L HL PL Q ++Q + + +A L S +P++LK + Sbjct: 173 RYRFKLPPHLKPLNLGQNVVQVRSLDHVKNRGHDPALSWKDVAWLRSICSLPIILKGI-- 230 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 L++ D L ++ G+ ++ GG + + + +I + Sbjct: 231 -LTAEDTRLAVQHGVDGILVSNHGGRQLDGVPATIEALPEI-----------------VQ 272 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEF 312 ++ + GG+R G D+LK++ LGA + P + D + + L++E Sbjct: 273 AAGDKLEVYMDGGVRTGTDVLKALALGARAVFVGRPVIWGLCYDGEEGATKVLSILKEEL 332 Query: 313 IVSMFLLGTKRVQEL 327 ++M L G R+ ++ Sbjct: 333 SLAMALSGCTRLADI 347 >gi|302872799|ref|YP_003841435.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor obsidiansis OB47] gi|302575658|gb|ADL43449.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caldicellulosiruptor obsidiansis OB47] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 117/315 (37%), Gaps = 38/315 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 N + L R + E D VE GKKL P+L + +TG + M RI+ Sbjct: 47 ANVEALSKIRLNLRTIH--DAKEPDICVEMFGKKLDMPILAAPITGSSYNMGGRISEEDF 104 Query: 79 ----LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 ++ + E + M +F + +R H + I + D + Sbjct: 105 IQMVISGSKEAGTIGMCGDGGDPVFYESGLK---AIRNENGHGIAIIKPRSN----DQII 157 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 ++ +A GA + + ++ I G ++ L S+ +PL+LK + Sbjct: 158 KRIKEA-EDAGALAVGIDIDGAGLITMALMGQPVGPKTKEELKALISSSSLPLILKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ + E+ L+ G ++ GG ++ I Sbjct: 215 -MTEDEAEIALEVGASAIVVSNHGGRILDHTPGVAEVLPRIAE----------------- 256 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + A GG+R+GVD+LK + LGA + P + A + V +E + +E Sbjct: 257 KVKGKILIFADGGVRSGVDVLKYLALGADAVLVGRPIIHAAFGGGKEGVKLILEKIAQEL 316 Query: 313 IVSMFLLGTKRVQEL 327 +M L G K ++ + Sbjct: 317 KQAMILTGCKDIKSI 331 >gi|255933708|ref|XP_002558233.1| Pc12g14280 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582852|emb|CAP81055.1| Pc12g14280 [Penicillium chrysogenum Wisconsin 54-1255] Length = 497 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 122/365 (33%), Gaps = 80/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + + N F R L + + +D S LG K S P +++ G Sbjct: 136 ADDEITMRENHAAFHKIWFRPRIL--VDVEHIDMSTTMLGTKCSIPFYVTATALGKLGHP 193 Query: 70 -------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 K R N + +A + V + ++ +L Sbjct: 194 EGEVVLTKAAHRHN----VVQMIPTLASCSFDEIVDAKQGDQVQWLQL------------ 237 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD----------- 170 V + + + A G GLF+ ++ Q + F+D Sbjct: 238 --YVNKDREITRKIVEHA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDPGSNVQGGGDD 294 Query: 171 -------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I S +P++LK V C D+ +++G Sbjct: 295 IDRTQGAARAISSFIDPALSWKDIPWFKSITRMPIVLKGVQC---VEDVLRAVEAGCDGV 351 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG S ++ +++ ++ R + + GG+R Sbjct: 352 VLSNHGGRQLETARSGIEVLAEVMPALRE------------RGWEKRIEVFVDGGVRRAT 399 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK++ LGA+ G+ PFL + D V A++ LR E ++M L+G V +L N Sbjct: 400 DILKALCLGATGIGIGRPFLYAMSAYGIDGVDRAMQLLRDEMEMNMRLIGAPSVADL--N 457 Query: 331 TALIR 335 +L+ Sbjct: 458 PSLLD 462 >gi|78042702|ref|YP_359141.1| FMN-dependent family dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77994817|gb|ABB13716.1| dehydrogenase, FMN-dependent family [Carboxydothermus hydrogenoformans Z-2901] Length = 340 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 44/321 (13%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N + + L R + E D + E G K+S P+ + +TG M + Sbjct: 43 KAFQENLRALSRYKLNLRTIHG--VKEPDLTFELFGVKVSMPVFAAPITGTTYNMGGALT 100 Query: 77 RNLAIAAEKTKVAMAVGSQRVMF-------SDHNAIKS--FELRQYAPHTVLISNLGAVQ 127 E+ +A+A GS +D S +++ + I A Sbjct: 101 E------EEYTLAVAEGSLLAGTLAFTGDGADPTMYGSGLKAIKKVEGKGIPIIKPRA-- 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPL 186 + +++ +A GA + + ++ + G ++ + ++ +P Sbjct: 153 --QEEIIKRIREA-EETGAIAVGVDIDGAGLLTMALKGQPVSPKTLEEVMEIVNSTRLPF 209 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + ++ + EL +++G + ++ GG D+ +I Sbjct: 210 ILKGI---MTPDEAELAVRAGAKAIVVSNHGGRVLDETPGAADVLPEIAA---------- 256 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAI 305 + +A GG+R+GVD+LK + LGA + P + A + V + Sbjct: 257 -------RVKGKITILADGGVRSGVDVLKLLALGADGVLIGRPIIVAAFGGGAEGVKIYL 309 Query: 306 ESLRKEFIVSMFLLGTKRVQE 326 E ++KE +M L G RV E Sbjct: 310 EKIKKELREAMLLTGVARVTE 330 >gi|67528452|ref|XP_662028.1| hypothetical protein AN4424.2 [Aspergillus nidulans FGSC A4] gi|40740999|gb|EAA60189.1| hypothetical protein AN4424.2 [Aspergillus nidulans FGSC A4] gi|259482762|tpe|CBF77551.1| TPA: mitochondrial cytochrome b2-like, putative (AFU_orthologue; AFUA_4G07020) [Aspergillus nidulans FGSC A4] Length = 494 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 117/341 (34%), Gaps = 63/341 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN- 78 D NK FD R L + VD + LG S PL +S M + I+R+ Sbjct: 145 DANKSCFDRIWFRPRVL--RNVRSVDTKSKILGVDSSIPLFVSPAA-----MAKLIHRDG 197 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----- 120 +A A E + + S ++ S + R+ L+ Sbjct: 198 ECAIARACESRGIMQGI-SNNSSYTMEELKDSAPGANFFFQLYVNREREKSAALLRKCSA 256 Query: 121 -SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL---- 171 N+ A+ + D +A + AD L + + P Q G A Sbjct: 257 NPNIKAIFVTVDAAWPGKREADERVKADESLSVPMAPSQARNDSKGGGLGRVMAGFIDPG 316 Query: 172 --SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 317 LTWEDLVWVRKHTHLPVCLKGV---MSADDAILAMEAGLDGILLSNHGGRNLDTSP---- 369 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 P+ ++L C E + G+R G DILK+I LGA+ G Sbjct: 370 --------------PSIITLLELHKRCPEIFDRMEIYVDSGIRRGTDILKAICLGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + L V I+ +R E +M +G + E Sbjct: 416 MGRSMLFATNYGQAGVEHLIDIMRDELETAMRNIGITSLDE 456 >gi|330929525|ref|XP_003302676.1| hypothetical protein PTT_14585 [Pyrenophora teres f. teres 0-1] gi|311321818|gb|EFQ89232.1| hypothetical protein PTT_14585 [Pyrenophora teres f. teres 0-1] Length = 509 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 115/338 (34%), Gaps = 63/338 (18%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNKMIERINRNLAIA 82 F R L I ++VD S LG K P +++ G N E I L Sbjct: 156 AFHKIWFRPRVL--IDVEKVDMSTTMLGTKCDIPFYVTATALGKLGNPEGEVI---LTRG 210 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 A K KV + + D E+ A + V + + A Sbjct: 211 AHKHKVIQMIPTLASCSFD-------EIVDEAKDGQVQWLQLYVNKDRQVTKRIVQHA-E 262 Query: 143 VLGADGLFLHLNPLQEIIQPNGNT--------------------------------NFAD 170 G GLF+ ++ Q + + + Sbjct: 263 KRGCKGLFITVDAPQLGRREKDMRSKFDDVGSNVQSTGGDNVDRSQGAARAISSFIDPSL 322 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I S +P++LK V C D+ ++ G+ ++ GG S ++ Sbjct: 323 SWKDIPWFRSITKMPIILKGVQC---VEDVIRAVEVGVDGVVLSNHGGRQLDFARSGVEV 379 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +++ V + AR + + + GG+R DI+K++ LGA G+ PF Sbjct: 380 LAEVMPVLR------------ARGWQDRIEVYIDGGVRRATDIIKAVALGAKGVGIGRPF 427 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L + V A++ L+ E ++M L+G + +L Sbjct: 428 LYAMSAYGLPGVDRAMQLLKDEMEMNMRLIGASSIADL 465 >gi|317038141|ref|XP_001401652.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 468 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 124/347 (35%), Gaps = 63/347 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +K + R L I VD + LG+ +S P+ +S +G Sbjct: 133 ADDEISKRQGQKAYQKVSFRPRILRSIR--NVDTTTSILGQPVSLPVYMSP-SGIAKFAH 189 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 LAIAA + +A + + M D P+ L + V + Sbjct: 190 PDGECALAIAAGEEGLAQVLANGSSMSIDAVRAAG-----IHPNQPLFQQV-YVNKDIKK 243 Query: 133 GVQKAHQAVHVLGADGLFLHLNP-------LQEIIQPNGNTNFADL-------------- 171 + +AV GA G+++ ++ + E + + Sbjct: 244 SEETVRRAVKA-GASGIWITVDSPVVGKREMDERLNLEVQARDSSAKGQGVAKTMASSIS 302 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + L D+P+++K + C D L + G++ ++ GG S Sbjct: 303 PYIDWEILTWLRGLTDLPVVIKGIQC---VEDAVLAYQHGVQGIVLSNHGGRSQDTA--- 356 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGAS 282 P ++L R Y Q GG+R G D+LK++ LGA+ Sbjct: 357 ---------------QPPLVTLLEIRRYAPYLIESNMQIFIDGGIRRGTDVLKALALGAT 401 Query: 283 LGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL PFL A +D AI+ LR+E ++M LG ++ EL Sbjct: 402 AVGLGRPFLFSLAAGYGADGTRRAIQILRQEIEMNMVFLGVTKLSEL 448 >gi|317025804|ref|XP_001389842.2| (S)-2-hydroxy-acid oxidase [Aspergillus niger CBS 513.88] Length = 366 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 115/350 (32%), Gaps = 70/350 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N + + L R L + ++D + + FPL +S TG + + Sbjct: 30 QITVTENSTAYKKYRLRPRVL--VDVSQLDLRLNLFNQTFDFPLGLSP-TGI--QAMAHP 84 Query: 76 NRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 LA A+ + + MAV S + +L A HT+ + L Sbjct: 85 QGELASSRASARRNIPMAVSSFSTYPVEDVVQAGQQLNPSATHTMQLYTFRDRALQT--- 141 Query: 134 VQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNG------------------- 164 + + G +FL + + P G Sbjct: 142 --QIIRRAEAAGCKAIFLTADSPVLGYRYNETRNDFRTPEGLSWPMMGVTSEQLQQVTHD 199 Query: 165 ------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 N++ + +I L S + + +K V L++ DI L + G ++ GG Sbjct: 200 AGFVATNSDAHSWAKEIPWLRSVTTMQIWIKGV---LTAEDILLAREYGCDGVIVSNHGG 256 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSI 277 + +PT +L + + GG+R G DI K++ Sbjct: 257 RQLDEV------------------VPTIDALPECVEAAAGKIRVHIDGGIRTGTDIFKAL 298 Query: 278 ILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA + P A D + V ++ L +EF M L G + + + Sbjct: 299 ALGAECCWIGRPTIWGLAYDGENGVSRVLDILYEEFKRCMQLTGCRTLAD 348 >gi|134055972|emb|CAK44151.1| unnamed protein product [Aspergillus niger] Length = 374 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 115/350 (32%), Gaps = 70/350 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N + + L R L + ++D + + FPL +S TG + + Sbjct: 38 QITVTENSTAYKKYRLRPRVL--VDVSQLDLRLNLFNQTFDFPLGLSP-TGI--QAMAHP 92 Query: 76 NRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 LA A+ + + MAV S + +L A HT+ + L Sbjct: 93 QGELASSRASARRNIPMAVSSFSTYPVEDVVQAGQQLNPSATHTMQLYTFRDRALQT--- 149 Query: 134 VQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNG------------------- 164 + + G +FL + + P G Sbjct: 150 --QIIRRAEAAGCKAIFLTADSPVLGYRYNETRNDFRTPEGLSWPMMGVTSEQLQQVTHD 207 Query: 165 ------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 N++ + +I L S + + +K V L++ DI L + G ++ GG Sbjct: 208 AGFVATNSDAHSWAKEIPWLRSVTTMQIWIKGV---LTAEDILLAREYGCDGVIVSNHGG 264 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSI 277 + +PT +L + + GG+R G DI K++ Sbjct: 265 RQLDEV------------------VPTIDALPECVEAAAGKIRVHIDGGIRTGTDIFKAL 306 Query: 278 ILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA + P A D + V ++ L +EF M L G + + + Sbjct: 307 ALGAECCWIGRPTIWGLAYDGENGVSRVLDILYEEFKRCMQLTGCRTLAD 356 >gi|224043931|ref|XP_002197677.1| PREDICTED: similar to MGC82107 protein isoform 1 [Taeniopygia guttata] Length = 355 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 120/333 (36%), Gaps = 48/333 (14%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + R L ++S +D + LG ++ FP+ I+ TG + ++ Sbjct: 36 DENILAYKRIRFRPRMLQDVSM--MDIRTKILGSEIGFPVGIAP-TGFHQLAWPDGEKST 92 Query: 80 AIAAEKTKVAMAVGSQR------VMFSDHNAIKSFEL-----RQYAPHTVLISN-LGAVQ 127 A AA + + + + ++ F+L R + V + LG Sbjct: 93 ARAARAMNICYIASTYSTCTLEEISAAAPGGLRWFQLYIHRNRAASQQLVQRAEALGFQG 152 Query: 128 LNYDFGV-QKAHQAVHVLGADGLFLHL-----------NPLQEIIQPNGNTNFADLSSKI 175 L + + V L H+ + E P + + + + I Sbjct: 153 LVLTADLPYSGKRRDDVRNGFRLPPHMKVKNLERAFEGDDWSEYGLPPNSLDPSVTWNDI 212 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 L S +P+++K + L+ D EL +K G++ ++ GG + D Sbjct: 213 YWLRSLTRLPIIIKGI---LTKEDAELAVKHGVQGIIVSNHGGRQLDEGPATIDAL---- 265 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PA 294 +E+ + GG+R G D+LK++ LGA + P L A Sbjct: 266 -------------VEVVEAVRGRVEVYVDGGIRKGSDVLKALALGAKCVFIGRPALWGLA 312 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + L+ EF +SM L G V E+ Sbjct: 313 YKGEEGLQDVLRILQDEFRLSMALAGCASVSEI 345 >gi|70994694|ref|XP_752124.1| mitochondrial cytochrome b2-like [Aspergillus fumigatus Af293] gi|66849758|gb|EAL90086.1| mitochondrial cytochrome b2-like, putative [Aspergillus fumigatus Af293] gi|159124962|gb|EDP50079.1| mitochondrial cytochrome b2-like, putative [Aspergillus fumigatus A1163] Length = 533 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 113/343 (32%), Gaps = 67/343 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R L + VD + LG S PL +S M + I Sbjct: 183 DANKSCFDRIWFRPRVL--RNVRSVDSRTKVLGVDCSMPLFVSPAA-----MAKLIHPDG 235 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKS-------FELRQYAPHTVLI------ 120 +A A E+ + V + D A S + R L+ Sbjct: 236 ECAIARACERKGIIQGVSNNSSYTLDQLREAAPSANFFFQLYVNRDRTKSAALLRQCSAN 295 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------- 171 N+ A+ + D +A + AD +L+ + + L Sbjct: 296 PNVRAIFVTVDAAWPGKREADERVKAD---ENLSVPMAPARAKNDKKGGGLGRVMAGFID 352 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 353 PGLTWDDLVWVRKHTHLPVCLKGV---MSADDAILAMQAGLDGILLSNHGGRNLDTSP-- 407 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P+ ++L C E + G+R G DILK+I LGA+ Sbjct: 408 ----------------PSIVTLLELHKRCPEIFDKMEIYVDSGIRRGTDILKAICLGATA 451 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+ L + V I+ ++ E +M G + E Sbjct: 452 VGMGRSMLFATNYGQEGVEHLIDIMKDELETAMRNTGITSLDE 494 >gi|78050047|ref|NP_001030243.1| hydroxyacid oxidase 2 [Bos taurus] gi|122140840|sp|Q3ZBW2|HAOX2_BOVIN RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal gi|73587057|gb|AAI03071.1| Hydroxyacid oxidase 2 (long chain) [Bos taurus] gi|296489459|gb|DAA31572.1| hydroxyacid oxidase 2 [Bos taurus] Length = 353 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 113/344 (32%), Gaps = 66/344 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N F L R L +VD G ++S P+ I+ TG + + Sbjct: 36 DENMAAFKKIRLRPRYLK--DVSKVDMRTTIQGAEISAPICIAP-TGFHRLAWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+ + + D + AP + L V N Q Sbjct: 93 ARAAQAASICYITSTYASCSLED--------IVAAAPRGLRWFQL-YVHPNRQINKQMIQ 143 Query: 139 QAVHVLGADGLFLHLN----------------------------PLQEIIQP---NGNTN 167 + V LG L + ++ P + P + Sbjct: 144 K-VESLGFKALVITVDVPKVGNRRNDITNQVDLMKKLLLKDLGSPEMGNVMPYFQMSPID 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + ++ S +P++LK + L+ D EL +K + ++ GG + + Sbjct: 203 PSICWEDLSWFQSMTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDEVPAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D +++ + + GG+R G D+LK++ LGA + Sbjct: 260 IDALTEV-----------------VAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVG 302 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P L A V ++ L+ EF SM L G + V E+ + Sbjct: 303 RPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQD 346 >gi|150951047|ref|XP_001387298.2| cytochrome b2, mitochondrial precursor [Scheffersomyces stipitis CBS 6054] gi|149388277|gb|EAZ63275.2| cytochrome b2, mitochondrial precursor [Pichia stipitis CBS 6054] Length = 581 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 116/340 (34%), Gaps = 48/340 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNN 69 + + N + + L VD S E LG K+ P S+ G+ Sbjct: 229 ADDEFSLRENHYAYSRIFFHPKVL--TDVQNVDISTEMLGSKVDAPFYCSAAAQARLGHP 286 Query: 70 KMIERINR---NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLIS 121 I R I + + + + + + + F+L R ++ + Sbjct: 287 DGEISIARGCGRENIIQMISSSSSNTFDEILDAARPDQPQWFQLYVLPDRSFSYKMIDKC 346 Query: 122 NLGAVQ-------------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 L ++ D + L + L +P+ P Sbjct: 347 KLRGIKGIFVTVDTALLGRREKDMRFRMFDNDNDDLETESLAKEKDPIMSFKDPGLT--- 403 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 I A D+P+++K V D+ L +++ I ++ GG + Sbjct: 404 ---WDDIRKFKQATDIPIVIKGVQR---VDDVLLAIENNIDGVVLSNHGGRQLDFSRAPI 457 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ +D+ V + + N+ + GG+R G D++K++ LGA GL Sbjct: 458 EVLADVNKVLKQ------------KNLENKIEIYIDGGVRRGSDVIKALCLGAKGVGLGR 505 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL + VV AI L++E + M LLG + +L Sbjct: 506 AFLYANSCYGEKGVVKAIRMLKEEMTLDMKLLGVSNISQL 545 >gi|9294640|dbj|BAB02979.1| glycolate oxidase [Arabidopsis thaliana] Length = 365 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 124/365 (33%), Gaps = 75/365 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N + F R L + ++D S + LG +S P++I+ TG Sbjct: 30 AEDQHTLNENVQAFRRIMFRPRVL--VDVSKIDMSTKILGYPISAPIMIAP-TG------ 80 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 N LA +T A A + + + + +FE + + V + V Sbjct: 81 ---NHKLAHPEGETATAKAAAACNTIMVLRVSYMSSCTFEEIASSCNAVRFLQI-YVYKR 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADL-------- 171 D Q +A G + L ++ ++I P NF L Sbjct: 137 RDITAQVVKRA-EKAGFKAIVLTVDVPRLGRREADIKNKMISPQ-LKNFEGLFSTEVRPS 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I L S ++P+L+K + L+ D +++G+ + Sbjct: 195 KGSGVQAFASRAFDASFSWKDIEWLRSITELPILVKGI---LTREDALKAVEAGVDGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + + ++ + + GG+R G D+ Sbjct: 252 SNHGGRQLDYSPATITVLEEV-----------------VQVVRGRIPVLLDGGVRRGTDV 294 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ LGA + P + A D V I+ L+ EF ++M L G + ++ N Sbjct: 295 FKALALGAQAVLIGRPIIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDITRNHV 354 Query: 333 LIRHQ 337 ++ Sbjct: 355 RTENE 359 >gi|115473355|ref|NP_001060276.1| Os07g0616500 [Oryza sativa Japonica Group] gi|75329161|sp|Q8H3I4|GLO4_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; AltName: Full=Glycolate oxidase 4; Short=GOX 4; Short=OsGLO4; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO4 gi|33146942|dbj|BAC79990.1| putative (S)-2-hydroxy-acid oxidase [Oryza sativa Japonica Group] gi|113611812|dbj|BAF22190.1| Os07g0616500 [Oryza sativa Japonica Group] gi|215701239|dbj|BAG92663.1| unnamed protein product [Oryza sativa Japonica Group] Length = 366 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 115/353 (32%), Gaps = 54/353 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + ++D S LG + P++++ TGG+ Sbjct: 32 AEDEHTLRENIAAYTRIILRPRVL--VDVSKIDMSTTLLGYTMRSPIIVAP-TGGHKLAH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 + A AA A+ V S + S ++ R + V + Sbjct: 89 PEGEKATARAAASCN-AIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRA 147 Query: 122 N---LGAVQLNYD---FGVQKAHQAVHVLGADGLFL----------HLNPLQEIIQPNGN 165 A+ L D G ++A ++ L N Q Sbjct: 148 ESCGFKALLLTVDTPMLGRREADIRNKMVFPRSGNLEGLMTTDDHDTTNGSQLERFARAT 207 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I L S +P+ LK + +++ D +++G+ ++ G Sbjct: 208 LDPSLSWKDIEWLKSITSMPIFLKGI---VTAEDARRAVEAGVAGVIVSNHGARQLDYAP 264 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + T +LE R + GG+R G D+ K++ LGA Sbjct: 265 A------------------TIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAV 306 Query: 285 GLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + P F A IE L E V+M L G + V E+ + + Sbjct: 307 MVGRPVFFGLAARGEAGARHVIEMLNGELEVAMALCGCRSVGEITRSHVMTEG 359 >gi|311254481|ref|XP_003125868.1| PREDICTED: hydroxyacid oxidase 2-like [Sus scrofa] Length = 353 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 118/343 (34%), Gaps = 64/343 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N F L R L +VD + G+++S P+ I+ M G + + Sbjct: 36 DDNVAAFKKIRLRPRYLK--DVSKVDTRITIQGEEISAPICIAPM-GFHCLAWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AA + S S + + + AP + L V N Q + Sbjct: 93 ARAARAAGICYVT-SMYASCSLEDIVGT------APGGLRWFQL-YVHPNRQLNKQLIQK 144 Query: 140 AVHVLGADGLFLHLN---------------PLQEII---------QPNGNTNF------- 168 V LG L + ++ LQ+ + + N F Sbjct: 145 -VESLGFKALVITVDVPKIGNRRHNMANQVDLQKTLLLKDLGLSAKGNSMPYFQMSPIDP 203 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ S +P++LK + L+ D EL +K + ++ GG + + Sbjct: 204 SICWDDLSWFQSLTRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASI 260 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D S++ + + GG+R G D+LK++ LGA + Sbjct: 261 DALSEV-----------------VAAVKGKIEVYLDGGIRTGNDVLKALALGAKCVFVGR 303 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P L A V + L+ EF SM L G + V E+ + Sbjct: 304 PILWGLACKGEHGVEEVLNILKNEFHTSMTLTGCRSVAEINRD 346 >gi|134079030|emb|CAK48339.1| unnamed protein product [Aspergillus niger] Length = 401 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 120/376 (31%), Gaps = 83/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ +D L R L + V LG ++ PL +S + Sbjct: 39 ATDTFTHESNRTMYDRIFLRPRIL--RNVTSVSTKTNILGCRMDLPLFMSPAA---MATL 93 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQR----VMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + LA+A + V + S+ + + + ++ P + V Sbjct: 94 VHPDGELALARGCARYGVGIVGMKVSTNAAYHLSEITSAAAKQNKKDHPFFFQL----YV 149 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLN--------------------------PLQEII 160 + + + A GA +F+ ++ P+ Sbjct: 150 NKDREVSRRLLRTA-EENGAKAIFVTVDAPVAGKREADERVPLDPHDIRFRTPLPMSGAC 208 Query: 161 QPNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + L +A L +P++LK V ++ D L ++ G Sbjct: 209 IGGNDEKGGGLGRSMGQYIDAGFTWEDLAWLKQNTFLPIVLKGVQ---TAEDAVLAVEHG 265 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIA 263 + ++ GG S S + L R C + + Sbjct: 266 VDGIVVSNHGGRSLDTSTSSIAV------------------LLEIRRRCPQVFDRLEVFV 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K+I LGA G+ FL + V IE +R E +M LLG Sbjct: 308 DGGIRRGTDIIKAICLGAKAVGMGRHFLYSLCYGQEGVERLIEIMRDELETTMKLLGITD 367 Query: 324 VQELY---LNTALIRH 336 + + + LNT + H Sbjct: 368 LSQAHLGLLNTLDVDH 383 >gi|302389207|ref|YP_003825028.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosediminibacter oceani DSM 16646] gi|302199835|gb|ADL07405.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosediminibacter oceani DSM 16646] Length = 340 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 117/315 (37%), Gaps = 38/315 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------GNNKMIER 74 N + L R L + D +VE G+KLS P+L + +TG G E Sbjct: 47 ANVQALARVRLNMRTLHG--AKDPDITVELFGRKLSMPILAAPITGSEYNMGGAVPEEEF 104 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 I ++ + + M +F D + + H + + D + Sbjct: 105 IQMVISGSKAAGTIGMCGDGGNPLFYDSGLK---AIEKEGGHGIAVMKPR----ENDVAL 157 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + A +A ++GA + + ++ I G ++ + S + VP +LK + Sbjct: 158 RMAERA-KIIGAVAVGMDVDGAGLITMALMGQPVGPKTREELEEIISKVGVPFILKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ + +L + G + ++ GG ++ I + Sbjct: 215 -MTVDEAQLAYEVGAKAIVVSNHGGRILDSTPGVAEVLPAIAEKLKG------------- 260 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + +A GG+R+GVD+LK + LGA + P + A + V +E++ KE Sbjct: 261 ----KITILADGGVRSGVDVLKYLALGADAVLVGRPVIIGAYGGGAEGVKVVLETMAKEL 316 Query: 313 IVSMFLLGTKRVQEL 327 +M L G + + Sbjct: 317 KQAMILTGCNDIASI 331 >gi|73981246|ref|XP_533023.2| PREDICTED: similar to Hydroxyacid oxidase 2 (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) [Canis familiaris] Length = 353 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 118/344 (34%), Gaps = 66/344 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N F L R L EVD G++++ P+ IS TG + + + Sbjct: 36 DDNITAFKRIRLRPRYLK--DVQEVDTRTTVQGEEITAPICISP-TGFHCLVWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+ + + D + AP + L +Q + Q Sbjct: 93 ARAAQAAGICYITSTYASCALED--------IVATAPRGLRWFQL-YMQSDKQLNKQLVQ 143 Query: 139 QAVHVLGADGLFLHLNPL------QEIIQ----------------PNGNT---------N 167 + V LG L + ++ Q+I N + Sbjct: 144 K-VESLGFKALVITVDVPKLGNRRQDIQNQLDLKMNLLLKDLRSTKERNPMPYFQMFPID 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + ++ L S +P++LK + L+ D EL +K + ++ GG + + Sbjct: 203 ASFCWNDLSWLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVLAS 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D +++ + + GG+R G D+LK++ LGA L Sbjct: 260 IDALAEV-----------------VAAVKGKMEVYLDGGIRTGNDVLKALALGAKCVFLG 302 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P L A V + ++ EF SM L G + V E+ + Sbjct: 303 RPILWGLAYKGEYGVEEVLNIIKNEFHTSMALTGCRSVAEINQD 346 >gi|154294051|ref|XP_001547469.1| hypothetical protein BC1G_14059 [Botryotinia fuckeliana B05.10] gi|150845104|gb|EDN20297.1| hypothetical protein BC1G_14059 [Botryotinia fuckeliana B05.10] Length = 471 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 123/362 (33%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F + L + ++VD + LG K+ P +++ G + Sbjct: 111 ADDEITMRENHSAFHKIWFRPKVL--VDVEKVDFTTTMLGTKVDIPFYVTATALGKLGHP 168 Query: 71 MIERINRNLAI----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 E + A +A + + ++ ++ +L V Sbjct: 169 EGEVVFTRAAKKHNVIQMIPTLASCSFDEIMDAAEGEQVQWLQL--------------YV 214 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 + + + A G GLF+ ++ Q + F D+ Sbjct: 215 NKDREITKKIVQHA-ERRGCKGLFITVDAPQLGRREKDMRSKFTDVGSSVQSSSGQSTDN 273 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P++LK V D+ ++ G++ ++ Sbjct: 274 SQGAARAISSFIDPALSWKDIPWFKSITKMPIILKGVQR---VEDVIRAVECGVQGVVLS 330 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ V ++ R + N + GG+R DI+ Sbjct: 331 NHGGRQLDFARSGIEVLAEVMPVLRE------------RGWENRIEIYIDGGVRRSTDII 378 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G V +L N L Sbjct: 379 KALCLGAKGVGIGRPFLYAMSAYGLAGVDRAMQLLKDEMEMNMRLIGCSSVDQL--NPTL 436 Query: 334 IR 335 I Sbjct: 437 ID 438 >gi|296421106|ref|XP_002840107.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636319|emb|CAZ84298.1| unnamed protein product [Tuber melanosporum] Length = 499 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 118/348 (33%), Gaps = 59/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + R L + ++VD S LG K P +++ G + Sbjct: 137 ADDEITLRENHSAYHKIWFRPRIL--VDVEQVDSSTSMLGSKCEVPFYVTATALGKLGHL 194 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E L AA + V + + SF+ A + L Sbjct: 195 EG-EVVLTRAASRHGVIQMIPTLGSC--------SFDEIVDAKRGDQVQWLQLYVNQDRE 245 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQ------------EIIQPNGNTNFADLSSK------ 174 ++ Q G GLF+ ++ Q E + N + Sbjct: 246 ITKRIVQHAEKRGCKGLFVTVDAPQLGRREKDIRTRFEGAASDVQKNNPGAIDRSQGAAR 305 Query: 175 --------------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 I S +P++LK V D+ ++ GI ++ GG Sbjct: 306 AISTFIDPSLSWKDIPYFKSITKMPIVLKGVQR---VEDVLTAIEHGIPAVVLSNHGGRQ 362 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 S ++ +D+ + R ++ + GG+R DI+K++ LG Sbjct: 363 LDTAPSAIEILADVMPELR------------RRGLQDKIEVYVDGGVRRATDIIKALCLG 410 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A G+ PFL + VV A++ L+ EF V+M L+G + V EL Sbjct: 411 AKGVGIGRPFLYAMSAYGEPGVVHAMQLLKDEFEVAMRLIGARSVGEL 458 >gi|154272756|ref|XP_001537230.1| cytochrome b2, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150415742|gb|EDN11086.1| cytochrome b2, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 513 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 113/358 (31%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + VD S LG S P +++ G Sbjct: 143 ADDEMTLRENHSAFHKVWFRPRIL--VDVQNVDISTTMLGSPTSVPFYVTATALGKLGHP 200 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA +A + V + ++ +L T+ Sbjct: 201 EG-EVCLTRAANTHNVIQMIPTLASCSFDEIVDARGPDQVQWLQLYVNKDRTI------- 252 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--------------------------EI 159 ++ Q G LF+ ++ Q E Sbjct: 253 --------TKRIVQHAQQRGCKALFITVDAPQLGRREKDMRSKFSDRGSAVQAADGKSES 304 Query: 160 IQPNGNTNFADL---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S D+P++LK V D+ ++ GI Sbjct: 305 SMDRSQGAARAISSFIDPSLSWKDIPWFQSLTDMPIVLKGVQR---VDDVLRAVQMGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +++ + R + N + GG+R G Sbjct: 362 VVLSNHGGRQLEFAPSAIELLAEVMPELR------------RRGWQNRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G + +L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGMPGVERAMQLLKDEMVMNMRLIGCSNIGQL 467 >gi|327278090|ref|XP_003223795.1| PREDICTED: hydroxyacid oxidase 2-like isoform 2 [Anolis carolinensis] Length = 361 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 124/352 (35%), Gaps = 64/352 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN---KMIERIN 76 D N + +L R L V+ LG ++SFP+ I+ TG + E+ Sbjct: 36 DNNLMAYKRIYLRPRLL--RDVSAVNTKTTILGTEISFPVGIAP-TGFHKLFCPDGEQST 92 Query: 77 RNLAIAAEKTKVAMAVGSQRVM---FSDHNAIKSFE-------------LRQYAPHTVLI 120 A +A + V + ++ F+ +R+ Sbjct: 93 ARAGAAMNTCYIASTYSTCSVEEIAAATPAGLRWFQLYIHRRRDLSEQLVRRMEASGFQA 152 Query: 121 SNLGA---------------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + A +Q ++ A+ N E P + Sbjct: 153 LVVTADLPYTGKRREDMRNSLQFLSSMTLKNFEAAMKCFSVSQ----ENDHSEYGLPRDS 208 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + IA L S +PL++K + L+ D EL ++ G++ ++ GG + Sbjct: 209 IDPSVSWKDIAWLKSLTHLPLIIKGI---LTKEDAELAVRHGVQGIIVSNHGGRQLDGVP 265 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D +E+ + + GG+R G D+LK++ +GA Sbjct: 266 ATIDAL-----------------VEVIAAVQGKVEVYLDGGIRTGSDLLKALAIGAKCVF 308 Query: 286 LASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + P A + ++ ++ L+ EF +SM L G + V E+ + L+R+ Sbjct: 309 IGRPAIWGLAYKGEEGLIQVLKILKNEFSLSMALAGCRNVSEI--DQRLVRY 358 >gi|260824425|ref|XP_002607168.1| hypothetical protein BRAFLDRAFT_57337 [Branchiostoma floridae] gi|229292514|gb|EEN63178.1| hypothetical protein BRAFLDRAFT_57337 [Branchiostoma floridae] Length = 374 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 122/345 (35%), Gaps = 56/345 (16%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + F + LI R L ++S D SV LG L+ P+ I+ + LA Sbjct: 41 NTEAFRRYRLIPRNLRDVSIR--DTSVTVLGSNLAIPVAIAPTA---LHRFAHPDAELAT 95 Query: 82 A--AEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLISN---LGA 125 A A K M +GS + A + ++ R + + + A Sbjct: 96 AKGAAAMKTGMVLGSWSNHSLEEVAEATPRGIHWFYMPFYKDRNHMKRLLDRAERAGYSA 155 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLN------PLQEIIQPNGNTNFAD------LSS 173 + L D + + L P I D Sbjct: 156 IFLTIDQPINLFSTGGSAPRSFPFPLRFPNVFDEEPPHAIGTAEYRQCLRDAVKEPATWE 215 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + +P++LK + LS+ D ++ ++ G+ ++ GG + + D+ + Sbjct: 216 DVEWVRENTRLPVVLKGI---LSADDAKMAVERGVNGIYVSNHGGRELDGVPATIDVLPN 272 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK- 292 I R +A+ GG+R G D+LK++ LGA + P L Sbjct: 273 I-----------------VRAVDGKAEVYLDGGVRTGTDVLKALALGARCVFIGRPALWG 315 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + + V ++ L E ++M G ++ ++ +L+ HQ Sbjct: 316 LAHNGEEGVQQVLQILTDELSLAMARAGCSKISDIQ--PSLVVHQ 358 >gi|15236857|ref|NP_193570.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|75318383|sp|O49506|GLO5_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO5; AltName: Full=Glycolate oxidase 3; Short=AtGLO5; Short=GOX 3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO5 gi|2832641|emb|CAA16716.1| glycolate oxidase - like protein [Arabidopsis thaliana] gi|7268629|emb|CAB78838.1| glycolate oxidase-like protein [Arabidopsis thaliana] gi|25054935|gb|AAN71944.1| putative glycolate oxidase [Arabidopsis thaliana] gi|332658631|gb|AEE84031.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 368 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 117/359 (32%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG +S P++I+ + + Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDVSTTVLGFNISMPIMIAPTA---MQKM 83 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV-LISNLGAVQLNYD 131 + LA A S ++ + + + A + V + + Sbjct: 84 AHPDGELATARAT--------SAAGTIMTLSSWATCSVEEVASTGPGIRFFQLYVYKDRN 135 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNT--NFADL-------- 171 +Q +A G + L ++ P G T NF L Sbjct: 136 VVIQLVKRA-EEAGFKAIALTVDTPRLGRRESDIKNRFALPRGLTLKNFEGLDLGKIDKT 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I L S +P+L+K V +++ D + ++ G + Sbjct: 195 NDSGLASYVAGQVDQSLSWKDIKWLQSITSLPILVKGV---ITAEDARIAVEYGAAGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T ++LE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TIVALEEVVKAVEGRIPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ LGAS + P L A D V ++ LR EF ++M L G + ++E+ Sbjct: 294 VFKALALGASGVFVGRPSLFSLAADGEAGVRKMLQMLRDEFELTMALSGCRSLREISRT 352 >gi|291224306|ref|XP_002732146.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 387 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 132/351 (37%), Gaps = 51/351 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ D N+K F ++ R L + D S LG + FP+ I++ ++K+ Sbjct: 58 ADEEISRDENRKAFSRLKILPRVL--RDVSKRDLSTTILGNHIHFPVCIAASA--HHKLA 113 Query: 73 ---ERINRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFEL-----RQYAPHTVLI 120 I A A T + ++ S + V + A+K F+L R+ + + Sbjct: 114 CSDGEICTAKAAKAMGTCMMLSTFSNTSLENVAAAGPGALKWFQLYIWHTRELSADLIKR 173 Query: 121 SNLG---AVQLNYDFGVQKAHQAVHVLG------ADGLFLHLN----PLQEIIQPNGNTN 167 + + A+ L D V + + + + +HL + Sbjct: 174 AEMAGFEALVLTVDVPV-TGKRRIDIYHGGFTPPSHIQMVHLPERYRVTSNYGGAGNMLD 232 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A IA + S +P++LK + LS D L +K I ++ GG + + Sbjct: 233 SALTWDCIAWMRSITKLPIVLKGI---LSPEDALLAVKHKIDGIIVSNHGGRQLDTVPAT 289 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ I + + + GG+R G D++K++ LGA + Sbjct: 290 IEVLPQI-----------------VKSVNGQLEVYLDGGVRTGTDVIKALALGARAVFVG 332 Query: 288 SPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P + + +++ ++ L+ E ++M L G + ++ + + R + Sbjct: 333 RPIIYGLVYAAEVGATQVLQILKNELSLAMALSGCATISDIESSLVVHRSE 383 >gi|322700132|gb|EFY91889.1| mitochondrial cytochrome b2, putative [Metarhizium acridum CQMa 102] Length = 483 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 102/312 (32%), Gaps = 47/312 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 + V G +L P ++ TG E LA A + + + + Sbjct: 160 NVAIVTTETRLFGCRLDAPFYVAP-TGAVRTAGEEGELALARGAGPSGIIHCISTPASYP 218 Query: 100 SDHNAIKS--------FELRQYAPHTVLISNLG------AVQLNYDFGVQKAHQAVHVLG 145 D + + + A L+ + A+ + D V + + Sbjct: 219 HDEILQATPRHAFFQLYVDKDRAKSAKLLRQISSNNKVKAIFVTVDLPVVSKREDDERVK 278 Query: 146 AD-GLFLHLNPLQE------IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 A+ + ++P ++ Q + A I + +P+++K + Sbjct: 279 AENAVEKQVSPGKDQKGAGLARQSGSFIDPAVTWDDIPWIRKHTHLPIVVKGIQR---WQ 335 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D L G ++ GG + P+ ++L C E Sbjct: 336 DARTALSLGCEGIVVSNHGGRAADTA------------------QPSIITLLELHRNCPE 377 Query: 259 A----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + GG R G DI+K+I LGAS G+ PFL + V AI LR E Sbjct: 378 VFGSMEVLIDGGFRRGSDIVKAICLGASAVGVGRPFLYAVNYGTAGVEHAIAILRDEIET 437 Query: 315 SMFLLGTKRVQE 326 +M L G + + Sbjct: 438 AMRLCGMTNLMD 449 >gi|118083411|ref|XP_416535.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 378 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 117/342 (34%), Gaps = 66/342 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + R L ++S +D + LG ++SFP+ I+ TG + ++ Sbjct: 59 DENILAYKRIRFRPRMLRDVSM--LDTRTKILGTEISFPVGIAP-TGFHQLAWPDGEKST 115 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AA+ + + E+ AP L + N Q Q Sbjct: 116 ARAAKAMGTCYIASTYSTCSLE-------EIAAAAPGGFRWFQL-YIHRNRAVSRQLVQQ 167 Query: 140 AVHVLGADGLFLH---------------------------------LNPLQEIIQPNGNT 166 A LG GL L + E P + Sbjct: 168 A-EALGFQGLVLTADLPYTGKRRNDVRNGFRLPPHMKLKNLEGAFEGDDRSEYGLPPNSL 226 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + I L S +P+++K + L+ D EL ++ G++ ++ GG + Sbjct: 227 DPSVTWDDIYWLRSLTHLPIVIKGI---LTKEDAELAVRHGVQGIIVSNHGGRQLDGAPA 283 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D +E+ + + GG+R G D+LK++ LGA + Sbjct: 284 TIDAL-----------------VEVVEAVRDRVEVYLDGGIRKGSDVLKALALGAKCVFI 326 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L A + + + LR EF +SM L G + E+ Sbjct: 327 GRPALWGLAYKGEEGLQDVLRILRDEFRLSMALAGCASISEI 368 >gi|302919469|ref|XP_003052870.1| hypothetical protein NECHADRAFT_35867 [Nectria haematococca mpVI 77-13-4] gi|256733810|gb|EEU47157.1| hypothetical protein NECHADRAFT_35867 [Nectria haematococca mpVI 77-13-4] Length = 383 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 117/339 (34%), Gaps = 60/339 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----NR 77 N +D L R + + ++V LG + P S + M + I + Sbjct: 43 NAACYDQMILRPRVM--VDVEKVSTKQRILGCESGVPFYFSPVA-----MAKLIHPEGEK 95 Query: 78 NLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSF-----ELRQYAPHTVLISN----- 122 +A +++ V + +Q + A +SF + + L++ Sbjct: 96 AVARGCKESNVIQTISTQASYPVEEIVKEGEAGQSFFYQLYVNKDRSKSEDLLARVQALG 155 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL--NPLQEIIQPNGNTNFADLSSK----- 174 + A+ + D V +A A+ GL + + + Sbjct: 156 IKAIFVTVDGPVPGKREADERAKAEEGLSIPSGSKAKSDSKGGGYGRIMGNWVDASLSWK 215 Query: 175 -IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 IA L A ++LK V +++MD +L + + ++ GG + + Sbjct: 216 DIAWLRKAWSGRIVLKGV---MTAMDAKLAAEHKLDGIVLSNHGGRNLDTSPA------- 265 Query: 234 IGIVFQDWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASP 289 T L L + C + + + GG+R G D+ K++ LGA G+ Sbjct: 266 -----------TILLLLELQKNCPHVFDQLEILVDGGIRRGTDVFKALCLGAKAVGVGRG 314 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 F + V +E L+ E +M L G + +++ Sbjct: 315 FSYALNYGEEGVKKYVEILKDELETTMRLCGITDLSQVH 353 >gi|196011862|ref|XP_002115794.1| hypothetical protein TRIADDRAFT_50780 [Trichoplax adhaerens] gi|190581570|gb|EDV21646.1| hypothetical protein TRIADDRAFT_50780 [Trichoplax adhaerens] Length = 368 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 132/364 (36%), Gaps = 84/364 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNK 70 + ++ N L R L + +VD S LG+K+SFP+ I S+M + Sbjct: 32 ADDEETLNDNINACKKLRLRPRML--VDVTKVDCSTTILGQKISFPVGIAPSAM-----Q 84 Query: 71 MIERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + + +A AA+ K M + + + + + +P+T+ L V Sbjct: 85 RMAHPDGEIATVKAADSLKTCMTLSTLSTTSME-------SVAEASPNTLRWFQL-YVVK 136 Query: 129 NYDFGVQKAHQAVHVLGADGLFL------------------HLNPLQEIIQPN------- 163 + + Q +A + G L L HL P + Sbjct: 137 DREITRQFVKRA-EMSGYKALVLTVDAPVLGNRRIDVRNRFHLPPHLSLGNFEKVTLHIE 195 Query: 164 --------------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 + + I L S +P+++K + L++ D E+ ++ G+ Sbjct: 196 KNKKSDSELSRYFVSEMDASLTWKDITWLKSITSLPVIVKGI---LTAEDAEMAVRVGVE 252 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP-LSL-EMARPYCNEAQFIASGGL 267 ++ GG G+PT +L E+ + N A+ A GG Sbjct: 253 GIWVSNHGGRQLD-------------------GVPTAIEALPEIVKAVNNRAEIYADGGF 293 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+ K+I LGA + P L + V ++ L++EF +M L G +++ Sbjct: 294 RTGTDVFKAIALGARAVFVGRPILWGLVYNGQKGVEKVLQLLQQEFHRTMQLSGCVSIKD 353 Query: 327 LYLN 330 + + Sbjct: 354 IKSS 357 >gi|302681071|ref|XP_003030217.1| hypothetical protein SCHCODRAFT_57415 [Schizophyllum commune H4-8] gi|300103908|gb|EFI95314.1| hypothetical protein SCHCODRAFT_57415 [Schizophyllum commune H4-8] Length = 504 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 114/340 (33%), Gaps = 56/340 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN-NKMIERINRNL 79 N + R L VD S LG K S P+ IS+ G +N L Sbjct: 144 ENHAAYHRVWFRPRIL--RDVTNVDWSTTILGHKTSMPIYISATALGKLGHPDGELN--L 199 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K + + + D + AP V L V + + + Sbjct: 200 TRAAAKHGIIQMIPTLASCSFDEI------VDAAAPGQVQFFQL-YVNKDRNITKRIVQH 252 Query: 140 AVHVLGADGLFLHLNPLQ------EIIQ----------PNGNTNFAD------------- 170 A G LF+ ++ Q ++ G Sbjct: 253 A-EKRGIKALFITVDAPQLGRREKDMRMKFDAEDPKVVTEGEKVDRSQGAARAISTFIDP 311 Query: 171 --LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + I S +PL+LK V C D + +G+ ++ GG S Sbjct: 312 GLSWADIPWFKSITKMPLILKGVQC---WEDALMAYDAGLAGVVLSNHGGRQLDFSRSGL 368 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ ++ T + + Q GG+R D++K+I LGA+ G+ Sbjct: 369 EVLVEVVDNL------TAK--RGLKFPNEKFQLFVDGGVRRATDVIKAIALGANAVGVGR 420 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PF+ + ++ V AI L EF +++ LLG ++++ Sbjct: 421 PFIYAFSTYGAEGVDKAINILHDEFAMNLRLLGAPTIKDI 460 >gi|83776334|dbj|BAE66453.1| unnamed protein product [Aspergillus oryzae] Length = 352 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 117/345 (33%), Gaps = 57/345 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N + + L R L + E D S G+K++FPL ++ + + Sbjct: 16 DQVTVAENSTAYGKYRLRPRVL--VDVSETDTSTTVFGQKITFPLCVAPA---GIQAMAH 70 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVM--------------FSDHNAIKSFELRQYAPHTV 118 + LA A K +V M V S + + + R + + Sbjct: 71 PDGELATSRACAKRQVHMGVSSFANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 130 Query: 119 LISN------LGAVQLNYDFGVQKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTN---- 167 + + + GV+ + +GL L E+I+ + + Sbjct: 131 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 190 Query: 168 ----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 191 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGGRQLDG 247 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D+ + + + + GG+RNG DI K++ LGA Sbjct: 248 TPATIDVLPEC-----------------VKAAKGKIRVHIDGGVRNGTDIFKALALGAEC 290 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P A D ++ L EF M L G K + ++ Sbjct: 291 CWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 335 >gi|320035803|gb|EFW17743.1| FMN-dependent dehydrogenase [Coccidioides posadasii str. Silveira] Length = 504 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 115/350 (32%), Gaps = 70/350 (20%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKMIERINRNLAI 81 F R L + + VD S LG +S P +++ G+ + + + A Sbjct: 149 LFHKIWFRPRIL--VDVENVDISSTMLGAPVSVPFYVTATALGKLGHPEGEICLTKAAAT 206 Query: 82 ---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 +A + V + + +L V + + + Sbjct: 207 HDVIQMIPTLASCSFDEIVDAAMDKQTQWLQL--------------YVNKDREVTRKIVQ 252 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD--------------------------- 170 A G GLF+ ++ Q + F+D Sbjct: 253 HA-EKRGCKGLFITVDAPQLGRREKDMRSKFSDPGTDVQRTDSNVDRSQGAARAISSFID 311 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 I S +P+ LK V D ++ G+ ++ GG S Sbjct: 312 PSLSWKDIPWFQSITKMPIALKGVQR---VDDALRAVELGVPAIVLSNHGGRQLEFAPSA 368 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 +L +++ + AR + N + GG+R DI+K++ LGA G+ Sbjct: 369 VELLAEVMPALR------------ARGWENRIEVYIDGGIRRATDIIKALCLGAKGVGIG 416 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 PFL + V A++ L+ E +++M LLG V +L + IR Sbjct: 417 RPFLYAMSTYGVPGVERAMQLLKDEMVMNMRLLGCTSVDQLTPDLLDIRG 466 >gi|297800234|ref|XP_002868001.1| hypothetical protein ARALYDRAFT_914854 [Arabidopsis lyrata subsp. lyrata] gi|297313837|gb|EFH44260.1| hypothetical protein ARALYDRAFT_914854 [Arabidopsis lyrata subsp. lyrata] Length = 368 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 118/359 (32%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG +S P++I+ + + Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDVSTRVLGFNISMPIMIAPTA---MQKM 83 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV-LISNLGAVQLNYD 131 + LA A S ++ + + + A + V + + Sbjct: 84 AHPDGELATARAT--------SAAGTIMTLSSWATCSVEEVASTGPGIRFFQLYVYKDRN 135 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNT--NFADL-------- 171 +Q +A G + L ++ P G T NF L Sbjct: 136 VVIQLVKRA-EEAGFKAIALTVDTPRLGRRESDIKNRFALPRGLTLKNFEGLDLGKIDKT 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I L S +P+L+K V +++ D + ++ G + Sbjct: 195 NDSGLASYVAGQVDQSLSWKDIKWLQSITSLPILVKGV---ITAEDARIAVEYGAAGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T ++LE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TIVALEEVVKAVEGRIPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ LGAS + P L A D V ++ LR EF ++M L G + ++E+ N Sbjct: 294 VFKALALGASGVFVGRPSLFSLAADGEAGVRKMLQMLRDEFELTMALSGCRSLREISRN 352 >gi|326430597|gb|EGD76167.1| cytochrome b2 [Salpingoeca sp. ATCC 50818] Length = 1056 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 121/345 (35%), Gaps = 53/345 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N F L R L I VD LG ++ P+ I+S G + Sbjct: 699 DEMSLRENHSAFHRLWLRPRIL--IDVSSVDLGSTMLGHRVKMPVYITSCALG---RLAH 753 Query: 75 INRN--LAIAAEKTKVAM----------------AVGSQRVMFS----DHNAIKSFELRQ 112 + L AA V A Q + ++ +R+ Sbjct: 754 PDGELCLTRAAATRGVVQLWPTLASCTIDEMASAATNDQILFLQLYVNHDRSVSERLIRR 813 Query: 113 YAPHTV--LISNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNG 164 + + + A QL D V+ +A V +D +++ Q I Sbjct: 814 AEKRGIKAIFVTVDAPQLGRREKDMRVKFTMEAPTVQKSDDSAGNVDRNQGTARAISQFI 873 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + + I L +P++LK V C D L + G+ + GG Sbjct: 874 DPSLSW--KDIEWLRGVTKLPIVLKGVQCA---EDALLAAERGLDGIVCSNHGGRQLDFA 928 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 S ++ ++ + AR + N+ + GG+R G D+LK++ LGA Sbjct: 929 RSGIEVLVEVMAALR------------ARGWQNKMEVYVDGGVRRGTDVLKALALGAKAV 976 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+ P L A + V E + E I+ M L+G +R+ +L Sbjct: 977 GIGRPTLYAMAGYGTAGVERVFEIVEDEMIMGMRLMGAQRIADLK 1021 >gi|261206476|ref|XP_002627975.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239593034|gb|EEQ75615.1| cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239610792|gb|EEQ87779.1| cytochrome b2 [Ajellomyces dermatitidis ER-3] gi|327350324|gb|EGE79181.1| cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 509 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 121/343 (35%), Gaps = 67/343 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD L R L + EV+ + LG ++ PL +S M++ I + Sbjct: 148 DANKSFFDRTWLRPRVL--RNVKEVNTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 78 NLA--IAAEKTKVAMAVG-SQRVMFSD-----HNAIKSFELRQYAPHTVLIS-------- 121 LA A E + + S D A F+L + Sbjct: 201 ELAVARACETRGIMQGISNSASYSMKDITAAGPKANYFFQLYVNKDRAKSAAHLKECSDN 260 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNT------------N 167 + A+ + D +A + AD L + P+ N + + Sbjct: 261 PRIRAIFITVDAAWPGKREADERVRADENLSV---PMSAQRAQNDSRGGGLGRVMAGFID 317 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 318 PALTWEDLIWARKHTHLPLVLKGV---MSADDAILAMKAGLDGILLSNHGGRNLDTSP-- 372 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P ++L C E + GG+R G DILK++ LGA+ Sbjct: 373 ----------------PALVTLLELHKRCPEIFDKMEIYVDGGIRRGTDILKAVCLGATA 416 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+ L A + V + ++ E +M L+G ++E Sbjct: 417 VGMGRSVLFSANYGQEGVEHLFDIMKDELEGAMRLVGITSLEE 459 >gi|291237268|ref|XP_002738559.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 369 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 129/357 (36%), Gaps = 58/357 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ D N+K F L+ R L + D S +G + FP+ I+S + Sbjct: 33 ADEEISRDENRKAFSRLKLLPRVL--RDVSKRDLSTTIVGNPIQFPVCIASSA-FHRLAC 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSDHNAIKS-----FELRQYAPHTVLISNLGAV 126 + A AA+ + + + D A S F+L + P V + NL Sbjct: 90 SDGEASTAKAAKAMNTCIMLSTYSTTPLEDVAAAGSGVLKWFQLYIWNPREVSV-NLIKR 148 Query: 127 QLNYDF--------GVQKAHQAVHV------LGADGLFLHLN-----------PLQEIIQ 161 F + + + L +HL Q+ Sbjct: 149 AETTGFKALVLTVDTPATGKRRIDIYSGGFTLPPHLELVHLPERYRVRKKNKHADQDYGG 208 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P + IA + S +P++LK + LS D L ++ + ++ GG Sbjct: 209 PKNLLDTTLTWECIAWMRSVTKLPIVLKGI---LSPEDALLAVEHKVDGIIVSNHGGRQL 265 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + ++ I + + + GG+RNG D+LK+I LGA Sbjct: 266 DTVPATIEMLPQI-----------------VKAVNGKLEVYLDGGVRNGTDVLKAIALGA 308 Query: 282 SLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + + ++ + ++ L+ EF ++M L G V ++ N++L+ HQ Sbjct: 309 RAVFVGRPIIYGLVYAAKEGATQVLQILKDEFSLAMALSGCATVNDI--NSSLVVHQ 363 >gi|255656362|ref|ZP_05401771.1| dehydrogenase [Clostridium difficile QCD-23m63] gi|296878575|ref|ZP_06902580.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] gi|296430382|gb|EFH16224.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP07] Length = 338 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 121/317 (38%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ + ++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAAPVSGTLLNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNCGNGIVFIKPWNNSKIIEKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N LQE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQLQE------NPFSPKTIDEIRELVESTRLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMTVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R+GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKAVKGKITILVDGGVRSGVDVVKMLGLGADAVLMGRPFVIASFGGGLDGVEFFIEKVRS 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L + V+++ Sbjct: 315 ELCETMILTACQNVKDI 331 >gi|240281450|gb|EER44953.1| cytochrome b2 [Ajellomyces capsulatus H143] gi|325092054|gb|EGC45364.1| cytochrome b2 [Ajellomyces capsulatus H88] Length = 513 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 112/358 (31%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + VD S LG S P +++ G Sbjct: 143 ADDEMTLRENHSAFHKVWFRPRIL--VDVQNVDISTTMLGSPTSVPFYVTATALGKLGHP 200 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA +A + V + ++ +L Sbjct: 201 EG-EVCLTRAANTHNVIQMIPTLASCSFDEIVDARGPDQVQWLQL--------------Y 245 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--------------------------EI 159 V + + + A G LF+ ++ Q E Sbjct: 246 VNKDRNITKRIVQHAQQR-GCKALFITVDAPQLGRREKDMRSKFSDRGSAVQAADGKSES 304 Query: 160 IQPNGNTNFADL---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S D+P++LK V D+ ++ GI Sbjct: 305 SMDRSQGAARAISSFIDPSLSWKDIPWFQSITDMPIVLKGVQR---VDDVLRAVQMGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S L +++ + R + + + GG+R G Sbjct: 362 VVLSNHGGRQLEFAPSAIGLLAEVMPELR------------RRGWQSRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G + +L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGVPGVERAMQLLKDEMVMNMRLIGCSNIGQL 467 >gi|320592190|gb|EFX04629.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 571 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 119/359 (33%), Gaps = 54/359 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---NN 69 + + N+ F R L + VD S LG +++ P +++ G + Sbjct: 200 ADDEISLRENRAAFQRVWFRPRVL--VDVARVDLSTTMLGSRVTAPFYVTATALGRLGHP 257 Query: 70 KMIERINRNLAI---AAEKTKVAMAVGSQRVMFSD----------HNAIKSFELRQYAPH 116 + + R +A + V +D ++ + R A Sbjct: 258 EGETVLTRAAGRHGVVQMIPTLASCSFDEIVDVADTMASSGASPPPQWLQLYVNRDRAIT 317 Query: 117 TVLIS---NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN-------- 165 +I G L + + + A L + + Q G Sbjct: 318 RRIIEHAERRGCRGLFITVDAPQLGRREKDMRAKAAAL-GDGGSAVQQQEGEQTDTTQGA 376 Query: 166 -------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFDIAGRG 217 + + + + +P++LK V D+ ++G + ++ G Sbjct: 377 ARAISSFIDPSLCWDDLPWFRTVTRLPIVLKGVQRA---EDVIRAAETGLVDGVVLSNHG 433 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G S ++ +++ + AR N + GGLR DILK++ Sbjct: 434 GRQLDFARSSLEVLAEVMPALR------------ARGLENRLEIYIDGGLRRATDILKAL 481 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LGA G+ PFL + D V A+ L+ E + M LLG +++L + IR Sbjct: 482 CLGARGVGIGRPFLYAMSAYGVDGVSRAMALLKDELEMDMRLLGAPAIRDLGPDLVDIR 540 >gi|297663908|ref|XP_002810400.1| PREDICTED: hydroxyacid oxidase 2-like isoform 2 [Pongo abelii] Length = 364 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 42 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 98 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 99 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 149 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 150 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 208 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 209 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 266 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 308 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 309 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|317159160|ref|XP_001827586.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 374 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 117/345 (33%), Gaps = 57/345 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N + + L R L + E D S G+K++FPL ++ + + Sbjct: 38 DQVTVAENSTAYGKYRLRPRVL--VDVSETDTSTTVFGQKITFPLCVAPA---GIQAMAH 92 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVM--------------FSDHNAIKSFELRQYAPHTV 118 + LA A K +V M V S + + + R + + Sbjct: 93 PDGELATSRACAKRQVHMGVSSFANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 152 Query: 119 LISN------LGAVQLNYDFGVQKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTN---- 167 + + + GV+ + +GL L E+I+ + + Sbjct: 153 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 212 Query: 168 ----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 213 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGGRQLDG 269 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D+ + + + + GG+RNG DI K++ LGA Sbjct: 270 TPATIDVLPEC-----------------VKAAKGKIRVHIDGGVRNGTDIFKALALGAEC 312 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P A D ++ L EF M L G K + ++ Sbjct: 313 CWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 357 >gi|148909048|gb|ABR17627.1| unknown [Picea sitchensis] Length = 367 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 119/359 (33%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+K F+ R L I +VD S LG K+S P++I+ KM Sbjct: 29 AEDQWTLHENRKAFERIRFRPRIL--IDVTKVDLSTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A A+ M + S + + + A I Sbjct: 85 HPEGEFATARASSAAGTIMTLSS----------WATSSVEEVASTGPGIRFFQLYVYKNR 134 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----QEIIQPNG--------NTNFADL-------- 171 V++ + G + L ++ +E N NF L Sbjct: 135 HVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFSLPPYLTLKNFEGLDLGKMEKT 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L + ++P+L+K V +++ D L +++G++ + Sbjct: 195 ADSGLASYVAGQIVRSLSWKDVKWLQTITNLPILVKGV---MTAEDTRLAVQAGVQGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T SLE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TISSLEEVVKAAQGRVPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ LGAS + P + A + V ++ LR EF ++M L G V+E+ N Sbjct: 294 VFKALALGASGIFIGRPVVFSLAAEGEAGVRNVLQMLRDEFELTMALAGCCSVKEINRN 352 >gi|296450194|ref|ZP_06891955.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] gi|296260957|gb|EFH07791.1| possible (S)-2-hydroxy-acid oxidase [Clostridium difficile NAP08] Length = 338 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 122/317 (38%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+K + + R + + + D S+E G+K+S P+ +S++G M +++ Sbjct: 47 ENRKSLEKIKINMRVIH--NVSKPDTSIELFGRKMSSPIFAASVSGTLLNMGGKVSEKEY 104 Query: 81 I-----AAEKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLIS---NLGAVQLNYD 131 I + + VG V D + + ++ + + ++ N + Sbjct: 105 IEPVVRGCSNSGIYAMVGDTNV---DTFLLDNLDVLKDNCGNGIVFIKPWNNSKIIEKIR 161 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + AV + D L N LQE N +I L + +P ++K + Sbjct: 162 LSEEAGAFAVG-VDLDACGLINNQLQE------NPFSPKTIDEIRELVESTRLPFIIKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++SG ++ GG ++ DI Sbjct: 215 ---MTVDDALMTVESGASAIIVSNHGGRVLDYTPGTCEVLPDI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 A+ + + GG+R+GVD++K + LGA + PF+ + D V IE +R Sbjct: 255 AKAVKGKITILVDGGVRSGVDVVKMLGLGADAVLMGRPFVIASFGGGLDGVEFFIEKVRS 314 Query: 311 EFIVSMFLLGTKRVQEL 327 E +M L + V+++ Sbjct: 315 ELCETMILTACQNVKDI 331 >gi|297663906|ref|XP_002810399.1| PREDICTED: hydroxyacid oxidase 2-like isoform 1 [Pongo abelii] Length = 351 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 29 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 86 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 137 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 195 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 196 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 252 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 253 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 295 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 296 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|56205790|emb|CAI23077.1| hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|119577102|gb|EAW56698.1| hydroxyacid oxidase 2 (long chain), isoform CRA_a [Homo sapiens] gi|194390066|dbj|BAG60549.1| unnamed protein product [Homo sapiens] Length = 364 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 42 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 98 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 99 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 149 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 150 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 208 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 209 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 266 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 308 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 309 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|255576605|ref|XP_002529193.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223531371|gb|EEF33207.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 364 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 121/356 (33%), Gaps = 59/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F R L + ++ S LG +S P++I+ + Sbjct: 31 AEDQHTLKENEEAFKRITFRPRIL--VGVSSIEMSTTILGYTVSAPIMIAPTA------M 82 Query: 73 ERINRNLAIAAEKT------KVAMAVGSQRVMFSD----HNAIKSFEL----RQYAPHTV 118 ++ A + + S + NA++ F+L R+ + Sbjct: 83 HKLAHPEGEVATARAAAASDTIMVVSSSASCSLKEVAASCNAVRFFQLYVYKRRDMATIL 142 Query: 119 L-------ISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHLNPLQEIIQ-----P 162 + + + FG ++A ++ +FL + E Sbjct: 143 VQRAECNGYKAIILTADSPRFGRREADIKNKMIVPQRKNVEVFLPPKVVPENGSGYEAYA 202 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N + + + I L S ++P+L+K V L+ D ++ G+ ++ G Sbjct: 203 NQHIDSSLCWKDIEWLKSITNLPILIKGV---LTREDAVKAMEIGVAGIIVSNHGARQLD 259 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + ++ + + + GG+R G D+ K++ LGA Sbjct: 260 YTPATISVLEEV-----------------VQAVGEKVPVLLDGGIRRGTDVFKALALGAQ 302 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + A+ D V ++ L+ E ++M L G ++++ + + Sbjct: 303 AVLVGRPVIYGLAVKGEDGVRQVMKMLKDELEITMALSGCATLKDITRSHVRTERE 358 >gi|116790018|gb|ABK25472.1| unknown [Picea sitchensis] gi|116790027|gb|ABK25475.1| unknown [Picea sitchensis] gi|224285516|gb|ACN40478.1| unknown [Picea sitchensis] Length = 367 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 119/359 (33%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+K F+ R L I +VD S LG K+S P++I+ KM Sbjct: 29 AEDQWTLHENRKAFERIRFRPRIL--IDVTKVDLSTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A A+ M + S + + + A I Sbjct: 85 HPEGEFATARASSAAGTIMTLSS----------WATSSVEEVASTGPGIRFFQLYVYKNR 134 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----QEIIQPNG--------NTNFADL-------- 171 V++ + G + L ++ +E N NF L Sbjct: 135 HVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFSLPPYLTLKNFEGLDLGKMEKT 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L + ++P+L+K V +++ D L +++G++ + Sbjct: 195 ADSGLASYVAGQIDRSLSWKDVKWLQTITNLPILVKGV---MTAEDTRLAVQAGVQGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T SLE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TISSLEEVVKAAQGRVPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ LGAS + P + A + V ++ LR EF ++M L G V+E+ N Sbjct: 294 VFKALALGASGIFIGRPVVFSLAAEGEAGVRNVLQMLRDEFELTMALAGCCSVKEINRN 352 >gi|322706109|gb|EFY97691.1| mitochondrial cytochrome b2-like protein [Metarhizium anisopliae ARSEF 23] Length = 483 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 102/312 (32%), Gaps = 47/312 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 + V G +L P ++ TG E LA A + + + + Sbjct: 160 NVSRVTTRTSLFGCRLDAPFYVAP-TGAVRTAGEEGELALARGAGPSGIIHCISTPASYP 218 Query: 100 SDHNAIKS--------FELRQYAPHTVLI------SNLGAVQLNYDFGVQKAHQAVHVLG 145 D + + + A L+ + AV + D V + + Sbjct: 219 HDEILQATPEHAFFQLYVDKDRAKSAKLLRQISASDKVKAVFVTVDLPVVSKREDDERVK 278 Query: 146 AD-GLFLHLNPLQE------IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 A+ + ++P ++ Q + A I + +P+++K + Sbjct: 279 AENTVEKQVSPGKDQKGAGLARQSGSFIDPAVTWDDIPWIRKHTTLPVVVKGIQR---WQ 335 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + G ++ GG + P+ ++L C E Sbjct: 336 DARTAMSLGCEGIVVSNHGGRAADTA------------------QPSIITLLELHRNCPE 377 Query: 259 A----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + GG R G DI+K+I LGAS G+ PFL + V A+ LR E Sbjct: 378 VFGKMEVLVDGGFRRGSDIVKAICLGASAVGVGRPFLYAVNYGTAGVEHAVALLRDEIET 437 Query: 315 SMFLLGTKRVQE 326 +M L G + E Sbjct: 438 AMRLCGMTDLME 449 >gi|145613343|ref|XP_363797.2| hypothetical protein MGG_01723 [Magnaporthe oryzae 70-15] gi|145020433|gb|EDK04562.1| hypothetical protein MGG_01723 [Magnaporthe oryzae 70-15] Length = 468 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 112/338 (33%), Gaps = 53/338 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L + + VD S LG K + P +++ G + Sbjct: 134 ADDEITFRENHSAFHRIWFRPKVL--VDVENVDVSTTMLGTKTALPFYVTATALGK---L 188 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAVQLNYD 131 + AA V Q + R+ V + G L Sbjct: 189 GNPEGEIMDAA--------VPGQVQWLQLYVNKD----REVTKRIVQYAEKRGCKGLFIT 236 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------------SSKIALL 178 + + + + +P + Q N + Sbjct: 237 VDAPQLGRREKDMRSKF----EDPGTSVQQGQTTDNSQGAARAISSFIDPALSWKDLPWF 292 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S +P++LK V D+ + +G+ ++ GG S ++ ++ V Sbjct: 293 RSITKMPIVLKGVQR---VEDVLKAVDAGMDGVILSNHGGRQLEFARSGIEILAETMPVL 349 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 + G+ ++ + GG+R G DI+K++ LGA G+ PFL + Sbjct: 350 RSMGL------------QDKIEVYLDGGVRRGTDIIKALCLGAKGVGIGRPFLYAMSAYG 397 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V A++ L+ E ++M L+G + +L + +L+ Sbjct: 398 VQGVDRAMQLLKDELEMNMRLIGCTSIDQL--SPSLVD 433 >gi|238507227|ref|XP_002384815.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] gi|220689528|gb|EED45879.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] Length = 374 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 117/345 (33%), Gaps = 57/345 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N + + L R L + E D S G+K++FPL ++ + + Sbjct: 38 DQVTVAENSTAYGKYRLRPRVL--VDVSETDTSTTVFGQKITFPLCVAPA---GIQAMAH 92 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVM--------------FSDHNAIKSFELRQYAPHTV 118 + LA A K +V M V S + + + R + + Sbjct: 93 PDGELATSRACAKRQVHMGVSSFANYSVEEIRAAGLDIGPIQHTMQVYTMQDRAHQERII 152 Query: 119 LISN------LGAVQLNYDFGVQKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTN---- 167 + + + GV+ + +GL L E+I+ + + Sbjct: 153 RRAEAAGCVAIFLTADSPILGVRYSEHRNDFRAPEGLDFPMLEKTSEMIRAERHEDGFTG 212 Query: 168 ----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +I L S + + +K V L++ D+EL ++ G ++ GG Sbjct: 213 VNSSSHSWAREIPWLRSVTKMQIWIKGV---LTAEDVELAIQHGCEGVVVSNHGGRQLDG 269 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D+ + + + + GG+RNG DI K++ LGA Sbjct: 270 TPATIDVLQEC-----------------VKAAKGKIRVHIDGGVRNGTDIFKALALGAEC 312 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P A D ++ L EF M L G K + ++ Sbjct: 313 CWIGRPIIWGLAYDGEAGAGKVLDILHTEFKRCMQLTGCKSIADI 357 >gi|47212121|emb|CAG06223.1| unnamed protein product [Tetraodon nigroviridis] Length = 373 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 121/369 (32%), Gaps = 78/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N FD W+L+ R L + VD SV LG+KLS P+ +++ +M Sbjct: 31 ADDQNTLKDNIAAFDRWYLVPRVL--RNVSTVDLSVCVLGEKLSMPVCVAATA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-------------------------QRVMFSDHNAIK 106 A A + M + S Q ++ D Sbjct: 87 HPDGETATAKACQAVGTGMMLSSWATSTIEEVMAAMTSTTGTEGVLWLQLYIYKDRELTL 146 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-----PLQEIIQ 161 S +R+ A+ + D + + L HL+ Sbjct: 147 SL-VRRAEQAGY-----KAIFVTVDTP-YLGKRRDDMRNHFKLPQHLSLSNFSTASLAFS 199 Query: 162 PNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 N + L IA L S +P+++K V L+ D + GI Sbjct: 200 EESYGNDSGLAVYVAKAIDPTLCWDDIAWLKSHTCLPVIVKGV---LNGDDAAKAVTYGI 256 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + D+ ++ + GG+R Sbjct: 257 DGILVSNHGARQLDGVPATLDVLEEV-----------------VKAVQGRCDVYMDGGVR 299 Query: 269 NGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D+LK++ LGA + P L V+ +E +++E ++M L G + V E Sbjct: 300 RGTDVLKALALGAKAVFIGRPVLWGLSCQGEQGVIEVLELIKQELRLAMALSGCRSVSE- 358 Query: 328 YLNTALIRH 336 ++ +++R Sbjct: 359 -VSRSIVRR 366 >gi|332237822|ref|XP_003268107.1| PREDICTED: hydroxyacid oxidase 2 isoform 2 [Nomascus leucogenys] Length = 364 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 42 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 98 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 99 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 149 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP----------------------LQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 150 LNKQLIQR-VESLGFKALVITLDAPVCGNRRHDIQNHLRRNLTLTDLQSPKKGNAIPYFQ 208 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 209 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 266 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 308 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 309 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|225555225|gb|EEH03518.1| cytochrome b2 [Ajellomyces capsulatus G186AR] Length = 513 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 114/358 (31%), Gaps = 76/358 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L ++ VD S LG S P +++ G Sbjct: 143 ADDEMTLRENHSAFHKVWFRPRIL--VNVQNVDISTTMLGSPTSVPFYVTATALGKLGHP 200 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E L AA +A + V + ++ +L Sbjct: 201 EG-EVCLTRAANTHNVIQMIPTLASCSFDEIVDARGPDQVQWLQL--------------Y 245 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--------------------------EI 159 V + + + A G LF+ ++ Q E Sbjct: 246 VNKDRNITKRIVQHAQQR-GCKALFITVDAPQLGRREKDMRSKFSDRGSAVQAADGKSES 304 Query: 160 IQPNGNTNFADL---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I S D+P++LK V D+ ++ GI Sbjct: 305 SMDRSQGAARAISSFIDPSLSWKDIPWFQSITDMPIVLKGVQR---VDDVLRAVQMGIPA 361 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG S +L +++ + R + + + GG+R G Sbjct: 362 VVLSNHGGRQLEFAPSAIELLAEVMPELR------------RRGWQSRIEVYIDGGVRRG 409 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA G+ PFL + V A++ L+ E +++M L+G + +L Sbjct: 410 TDILKALCLGAKGVGIGRPFLYAMSAYGVPGVERAMQLLKDETVMNMRLIGCSNIGQL 467 >gi|197287379|ref|YP_002153251.1| oxidase [Proteus mirabilis HI4320] gi|227358382|ref|ZP_03842722.1| possible (S)-2-hydroxy-acid oxidase [Proteus mirabilis ATCC 29906] gi|194684866|emb|CAR47004.1| putative oxidase [Proteus mirabilis HI4320] gi|227161418|gb|EEI46462.1| possible (S)-2-hydroxy-acid oxidase [Proteus mirabilis ATCC 29906] Length = 397 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 118/359 (32%), Gaps = 69/359 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F+ +++ RAL I F +++ EFLG KL P++ + M Sbjct: 62 AEDENNLRSNTNAFNKKYIMPRALQGIEFSDLNLKTEFLGIKLDTPIIQAPMA------A 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + + A +A A + + IK E+ Q P L D Sbjct: 116 QGLAHQQGEVATAKGMAKAGSIFSLSTYGNKTIK--EVAQAQPGYPFFFQL--YMSKNDA 171 Query: 133 GVQKAHQAVHVLGADGLFLHL-------------NPLQEIIQPNGNTNFADLSS------ 173 Q GA G+ L + N Q + FA +S Sbjct: 172 FNQYILSQAKQYGAKGIILTVDSPVGGYREDDIKNSFQFPLGFANLEAFAKISDDKSKTG 231 Query: 174 -------------------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I + +P+++K + S D + +K+G ++ Sbjct: 232 KGSGISEIYAQAKQAFTPADIQYVKKMSGLPVIVKGIE---SPEDADTAIKAGADAIWVS 288 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + D+ I A+ + G+R G + Sbjct: 289 NHGGRQLDSAPATIDVLPAI-----------------AKVVNKRVPIVFDSGVRRGSHVF 331 Query: 275 KSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ GA + + P L + ++ V + IE L KE ++M L G + V+E+ Sbjct: 332 KALASGADVVAVGRPILYGLNLGGAEGVNSVIEQLNKELRINMMLGGARNVKEIQATHL 390 >gi|291229430|ref|XP_002734679.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 354 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 124/351 (35%), Gaps = 62/351 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GG 67 + + N+ F ++ R L VD S LG+ L FP+ I+ GG Sbjct: 35 AEITLKENRTAFSRLKILPRILK--DVSNVDLSTSILGQHLDFPVCIAPSAFHKLVSPGG 92 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFEL-----RQYAPH 116 A AA M + + ++V H+++K F+L R++ + Sbjct: 93 ELDT--------ANAANAMGTCMVLSNLTTTSLEKVASLYHDSLKWFQLYIWECREFTVN 144 Query: 117 TVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGL-FLHLNPLQEI-----IQPNGNTN 167 + + ++ + D V+ + + +HL Q P + Sbjct: 145 LIRRAETAGFKSLVVTVDSSVKGNRRGPRFTFPPNIEAVHL--PQGFKVRSGRSPCSLAD 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 IA + S +P++LK + LS D L ++ + ++ GG + + Sbjct: 203 PTLTWEFIAWMRSVTKLPIVLKGI---LSPEDALLAVEHKVDAIIVSNHGGRQLDTVPAT 259 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ I + GG+R G D+ K++ +GA + Sbjct: 260 IEMLPHI-----------------IAAVRGRIEVYVDGGVRTGTDVFKALAMGARAVFIG 302 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P + D V ++ L+ E + +M L G ++ E+ + + HQ Sbjct: 303 RPIIYGLKYAGEDGVKQVLQILKDELMRTMALSGCSKISEI--EPSYVVHQ 351 >gi|212544344|ref|XP_002152326.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210065295|gb|EEA19389.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 489 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 123/356 (34%), Gaps = 68/356 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + + L R L ++D S + LG +S P+ IS++ G K Sbjct: 144 ADDEYSKAEAELAYRKVLLRPRIL--RDVSKIDTSTQILGHDVSLPIYISAV--GIAKFA 199 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI----------- 120 + LA AA +A + R S + +K+ R P + Sbjct: 200 HPLGECILAAAAGHEGIAQLC-ATRSSMSIESIMKT---RTGGPEQPIFFQLYMHKDAKI 255 Query: 121 ----------SNLGAVQLNYDFGVQKAHQAVHVLGA--------DGLFLHLNPLQEIIQP 162 + + + L D V + + A D + P+Q + + Sbjct: 256 SEATILKAVKAGVKGIWLTVDSPVTGKRERDERVKATVDVGEQNDNIGGKGQPVQGVAKT 315 Query: 163 NGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 +T L I+ + D+PL++K + S D L K + I+ GG S Sbjct: 316 LASTVAPYLDWNTISYIRKLTDLPLVIKGIQ---SVEDAVLAHKHKVDGIVISNHGGRSQ 372 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVDILK 275 ++ L+L Y + Q GG+R G D++K Sbjct: 373 DTAQAP------------------LLTLLEINKYAPHIIKDKKMQIFIDGGVRRGTDVVK 414 Query: 276 SIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++ LGA+ G+ PFL + I +R+E +M L+G ++ EL Sbjct: 415 ALALGATAVGMGRPFLYSMASGYGEAGTRRMIGIMREEIEQNMALVGVTKISELRR 470 >gi|66802328|ref|XP_629946.1| hydroxyacid oxidase [Dictyostelium discoideum AX4] gi|74996527|sp|Q54E41|HAOX_DICDI RecName: Full=Hydroxyacid oxidase; Short=HAOX; AltName: Full=Glycolate oxidase; Short=GOX gi|60463337|gb|EAL61528.1| hydroxyacid oxidase [Dictyostelium discoideum AX4] Length = 388 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 120/344 (34%), Gaps = 53/344 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMI 72 + N+ F L+ R+L + +V+ G+ +S P+LI+ +M ++ Sbjct: 59 DQITLAENENAFSRIKLVPRSL--VDVSKVNTKTRIFGRDISTPILIAPWAMQRMASQRG 116 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 E + A+++ M + S + + + F+ R+ + V + Sbjct: 117 EL---DTVEASKEFNTIMTLSSLSTTSVEDLSSATNGNPGWFQLYVFKDRKVSEELVKRA 173 Query: 122 N-LGAVQLNYDFGVQ-KAHQAVHVLGADGL--FLHLNPLQEIIQPN----------GNTN 167 +G L + + L L L ++++ N + Sbjct: 174 ESIGYSALVLTVDTPFLGKRTADFKNSFKLPNGLSLKIFEKLMLSNLDGGLNQYIATMID 233 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + L S +P+L+K + + D EL L+ G ++ GG S Sbjct: 234 PSLTWNDLKWLKSITKLPILVKGI---MCPKDAELALQYGADGIIVSNHGGRQLDTCPST 290 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ I + I GG+R G D+LK++ GA+ + Sbjct: 291 IEVLPYIS-----------------KVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIG 333 Query: 288 SPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P + D V+ + L E ++M L G + ++ + Sbjct: 334 RPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNS 377 >gi|7705393|ref|NP_057611.1| hydroxyacid oxidase 2 [Homo sapiens] gi|54234014|ref|NP_001005783.1| hydroxyacid oxidase 2 [Homo sapiens] gi|13124287|sp|Q9NYQ3|HAOX2_HUMAN RecName: Full=Hydroxyacid oxidase 2; Short=HAOX2; AltName: Full=(S)-2-hydroxy-acid oxidase, peroxisomal; AltName: Full=Cell growth-inhibiting gene 16 protein; AltName: Full=Long chain alpha-hydroxy acid oxidase; AltName: Full=Long-chain L-2-hydroxy acid oxidase gi|7208438|gb|AAF40200.1|AF231917_1 long-chain 2-hydroxy acid oxidase HAOX2 [Homo sapiens] gi|12043434|emb|CAC19798.1| hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|18089187|gb|AAH20863.1| Hydroxyacid oxidase 2 (long chain) [Homo sapiens] gi|46981963|gb|AAT08030.1| growth-inhibiting protein 16 [Homo sapiens] gi|119577103|gb|EAW56699.1| hydroxyacid oxidase 2 (long chain), isoform CRA_b [Homo sapiens] gi|123996975|gb|ABM86089.1| hydroxyacid oxidase 2 (long chain) [synthetic construct] gi|157928974|gb|ABW03772.1| hydroxyacid oxidase 2 (long chain) [synthetic construct] Length = 351 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 29 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 86 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 137 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 195 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 196 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 252 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 253 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 295 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 296 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|296419533|ref|XP_002839357.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635496|emb|CAZ83548.1| unnamed protein product [Tuber melanosporum] Length = 481 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 109/343 (31%), Gaps = 64/343 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN----R 77 N++ FD R + + VD + LG P I+ M IN + Sbjct: 137 NRRAFDRVLFRPRLM--RNVKSVDTRTKILGFSTGVPFFIAPTA-----MQGMINPDGEK 189 Query: 78 NLAIAAEKTKVAMAVGSQRVMF--------SDHNAIKSFELRQYAPH----TVLISN--- 122 +A+ A + KV + + F L++N Sbjct: 190 AVAMGAGEEKVIHIISTNSSHPISDIVSSGKGPEQQTHFLQLYVNTDRQKTAQLLANAKS 249 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 L AV + D + +A L D + I N + Sbjct: 250 CGLKAVFVTVDAHISGKREADERLKVDVPVRS--AVSGAISHNDKKGGGMGRLMGLYIDR 307 Query: 181 AMD---VPLLLKEVGCGL--------SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++ +P + K V GL ++ D L + G++ ++ GG + Sbjct: 308 TLNWEDIPWI-KSVAGGLPIVLKGIQTAADARLAAEYGVQGIVLSNHGGRNLDTSP---- 362 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 P +L C E + GG+R G DI K++ LGA+ G Sbjct: 363 --------------PALYTLLEIHKVCPEIFNSLEVYIDGGIRRGTDIFKALCLGATAVG 408 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + P+L ++ V + L+ E +M + G + ++ Sbjct: 409 VGRPYLYALNYGAEGVAHLTQILKDELETTMRMCGVTDLSGVH 451 >gi|328865369|gb|EGG13755.1| hydroxyacid oxidase [Dictyostelium fasciculatum] Length = 395 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 115/357 (32%), Gaps = 73/357 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N F+ L R L + ++ G LSFP++I+ + + Sbjct: 63 NQITLGENVNFYSRIKLTPRCL--VDVSNINTKTSVFGIPLSFPVMIAPTA---MQKMAH 117 Query: 75 INRNLAI--AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 N + AA M + S + S P + ++ Sbjct: 118 PNGEIDTCLAARDMGTLMTLSSLATTSVEDLGKAS----GGNPGWFQLYVFKDRSIS--- 170 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGN--TNFADL--------- 171 +K + + G + L ++ E P G NF DL Sbjct: 171 --EKLVKRAEMAGFKAILLTIDTPFLGRRESDYRNEFSLPTGLQLRNFTDLPLADIQGGL 228 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + +A L S +P+++K V + D L +K G ++ G Sbjct: 229 NKYMATMIDSSLTWNDLAWLKSITKLPVIVKGV---MCPQDALLAVKYGADGIIVSNHGA 285 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ + R I GG+R G DILK++ Sbjct: 286 RQLDTSPSTIEVLP-----------------YVVRAVGGRIPVIVDGGVRRGTDILKALA 328 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 GA + P L A D D V+ ++ LR E ++SM L G + ++ +LI Sbjct: 329 YGACAVMIGRPVLWGLAADGYDGVLKVLQLLRDELVLSMALAGVNSIS--KIDESLI 383 >gi|332237820|ref|XP_003268106.1| PREDICTED: hydroxyacid oxidase 2 isoform 1 [Nomascus leucogenys] Length = 351 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P+ I+ TG + + Sbjct: 29 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 86 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP----------------------LQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 137 LNKQLIQR-VESLGFKALVITLDAPVCGNRRHDIQNHLRRNLTLTDLQSPKKGNAIPYFQ 195 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 196 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 252 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 253 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 295 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 296 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|299751988|ref|XP_001830633.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] gi|298409625|gb|EAU91264.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] Length = 506 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 118/346 (34%), Gaps = 60/346 (17%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN-NKMIERINRNL 79 N + R L I +VD S LG K S P+ I++ G +N L Sbjct: 146 ENHAAYHRVWFRPRIL--IDVTKVDWSTTILGHKSSMPIYITATALGKLGHPDGELN--L 201 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA K V + + D EL A + V + + + Sbjct: 202 TRAAAKHNVIQMIPTLASCSLD-------ELIDAAQPGQVQWLQLYVNKDREITKRIVQH 254 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------------------- 167 A G GLF+ ++ Q + Sbjct: 255 A-EARGIKGLFITVDAPQLGRREKDMRMKFDADDPSEVKKAGSDGVDRSQGAARAISSFI 313 Query: 168 FADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 LS K I S +PL+LK V D G+ ++ GG S Sbjct: 314 DPGLSWKDIPWFQSITKMPLILKGVQR---WEDALKAYDLGLAGVVLSNHGGRQLDFARS 370 Query: 227 HRDLESDIGIVF-QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 ++ ++ + G+ P + Q GG+R D+LK++ LGA+ G Sbjct: 371 GLEVLVEVVEHLGKKRGLTFP---------NEKFQLFVDGGVRRATDVLKAVALGATAVG 421 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + PFL + + V AA++ L+ EF +++ LLG ++++ + Sbjct: 422 IGRPFLYAFSSYGQEGVEAALQILKDEFEMNLRLLGAPTIKDIQRD 467 >gi|319997178|gb|ADV91183.1| mitochondrial cytochrome b2-like protein 1 [Karlodinium micrum] Length = 434 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 115/363 (31%), Gaps = 71/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N F L R L + D +D + LG K+S PL ++S G Sbjct: 74 ADDEIGLRENHAAFHRVMLKPRVL--VDVDNIDMTSTILGTKVSIPLYVTSCALGRLYHE 131 Query: 73 ERINRNLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 + LA A + A + + ++L Sbjct: 132 DG-ECCLARGAALAGIPQLCPTLASCTMDEMHAARSPGQTQWWQL--------------Y 176 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ----EIIQPNGNTNFADL---------- 171 V + + +A LG LF+ ++ Q E N A++ Sbjct: 177 VNKDRELTKTVVQKA-ESLGFKALFITVDAPQLGRRERDMRNKAKMSANVQTKQKDKIPT 235 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 S + S +P++LK V G D + G+ ++ Sbjct: 236 QQGTTRAISSFIDPSLQWSDMPWFKSITSMPIILKGVQTG---KDAVRAYEMGMDGLVVS 292 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +I G + + GG R G D+ Sbjct: 293 NHGGRQLDYARSGIEMLVEIMDALSSIG-----------ADLEKFTVLVDGGFRRGSDVF 341 Query: 275 KSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA GL P L A + V ++ + E + M L+GT V ++ + Sbjct: 342 KALALGAKGVGLGRPTLVGMAAYGEEGVEKVVQIFKDEMEMHMRLMGTPTVADMVPKMVI 401 Query: 334 IRH 336 R+ Sbjct: 402 TRN 404 >gi|58261620|ref|XP_568220.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115799|ref|XP_773613.1| hypothetical protein CNBI2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256239|gb|EAL18966.1| hypothetical protein CNBI2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230302|gb|AAW46703.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 514 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 113/350 (32%), Gaps = 59/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + R L + VD S E LG K S P+ I++ G + Sbjct: 151 ADDEVTMRENHNAYHRVWFRPRIL--RNVGTVDYSTEILGFKTSMPVYITATALGK---L 205 Query: 73 ERINRN--LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 L AA + + + + + + P V L V + Sbjct: 206 GHPEGEICLTKAAGEHNIIQMIPTL------ASCGFDEMVDAAIPGQVQFLQL-YVNADR 258 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFAD------------------- 170 + + A G LF+ ++ Q + F Sbjct: 259 ERTKKIIRHAAER-GIKALFITVDAPQLGRREKDMRTKFEGTASAQQTKGGDKYQRDQGA 317 Query: 171 -------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 S L+ +A + ++LK V C D + ++G+ ++ G Sbjct: 318 ARAISSFIDPSLNWSDLKELVDAARGLKVILKGVQC---WEDAVMAAEAGVDGVVLSNHG 374 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G S L + G M P + GG+R D+LK++ Sbjct: 375 GRQLDFAPSPLALLPSVVQHLTAHGF-------MNNPLRPRFEIFVDGGVRRATDVLKAV 427 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA+ G+ P + + D V A++ L+ EF ++M LLG + + Sbjct: 428 ALGATAVGIGRPMIYAMSTYGKDGVSHALQILKDEFEMNMRLLGAPTMAD 477 >gi|317376202|sp|B8B8K5|GLO4_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; AltName: Full=Glycolate oxidase 4; Short=GOX 4; Short=OsGLO4; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO4 Length = 366 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 114/353 (32%), Gaps = 54/353 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + ++D S LG + P++++ TGG+ Sbjct: 32 AEDEHTLRENIAAYTRIILRPRVL--VDVSKIDMSTTLLGYTMRSPIIVAP-TGGHKLAH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 + A AA A+ V S + S ++ R + V + Sbjct: 89 PEGEKATARAAASCN-AIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRA 147 Query: 122 N---LGAVQLNYD---FGVQKAHQAVHVLGADGLFL----------HLNPLQEIIQPNGN 165 A+ L D G ++A ++ L N Q Sbjct: 148 ESCGFKALLLTVDTPMLGRREADIRNKMVFPRSGNLEGLMTIDDHDTTNGSQLERFARAT 207 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I L S +P+ LK + +++ D +++G+ ++ G Sbjct: 208 LDPSLSWKDIEWLKSITSMPIFLKGI---VTAEDARRAVEAGVAGVIVSNHGARQLDYAP 264 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + T +LE R + GG+R G D+ K++ LGA Sbjct: 265 A------------------TIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAV 306 Query: 285 GLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P F A IE L E V+M L G + V E+ + + Sbjct: 307 MXXXPVFFGLAARGEAGARHVIEMLNGELEVAMALCGCRSVGEITRSHVMTEG 359 >gi|224043933|ref|XP_002197696.1| PREDICTED: similar to MGC82107 protein isoform 2 [Taeniopygia guttata] Length = 348 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 117/336 (34%), Gaps = 61/336 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + R L ++S +D + LG ++ FP+ I+ TG + ++ Sbjct: 36 DENILAYKRIRFRPRMLQDVSM--MDIRTKILGSEIGFPVGIAP-TGFHQLAWPDGEKST 92 Query: 80 AIAAEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA + + + +A AP + L + N Q Sbjct: 93 ARAARAMNICYIASTYSTCTLEEISAA--------APGGLRWFQL-YIHRNRAASQQLVQ 143 Query: 139 QAVHVLGADGLFLH------------------LNPLQEIIQPNGN--------TNFADLS 172 +A LG GL L L P ++ + + Sbjct: 144 RA-EALGFQGLVLTADLPYSGKRRDDVRNGFRLPPHMKVKNLERAFEVCKMSPLDPSVTW 202 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + I L S +P+++K + L+ D EL +K G++ ++ GG + D Sbjct: 203 NDIYWLRSLTRLPIIIKGI---LTKEDAELAVKHGVQGIIVSNHGGRQLDEGPATIDAL- 258 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +E+ + GG+R G D+LK++ LGA + P L Sbjct: 259 ----------------VEVVEAVRGRVEVYVDGGIRKGSDVLKALALGAKCVFIGRPALW 302 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + + + L+ EF +SM L G V E+ Sbjct: 303 GLAYKGEEGLQDVLRILQDEFRLSMALAGCASVSEI 338 >gi|58270656|ref|XP_572484.1| L-mandelate dehydrogenase [Cryptococcus neoformans var. neoformans JEC21] gi|134116081|ref|XP_773312.1| hypothetical protein CNBI3650 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255935|gb|EAL18665.1| hypothetical protein CNBI3650 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228742|gb|AAW45177.1| L-mandelate dehydrogenase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 555 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 119/349 (34%), Gaps = 62/349 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L R L + + D FLG P+ IS K+ Sbjct: 212 ADSENTFHENTDAFRRYWLRPRILRK--VAQGDTKTSFLGIDTETPIFISPAA--MAKLG 267 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + NL A + + A+ + + E R+ + L + + Sbjct: 268 HPLGEVNLTRGAGRAGIVQAISANAS----CGLDEIMEAREEGQKVIYQIYLNKDRKASE 323 Query: 132 FGVQKAHQAVHVLGADGLFL--------------HLNP-----------------LQEII 160 +QK + + + +NP + E I Sbjct: 324 VLLQKVEKLKPAAVMFTVDVPWQSKRTMDTRAKNTVNPPIQDTAGSEKKSRAPLGVSEAI 383 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + IA + + VP+++K V S DIEL +K+G I+ GG S Sbjct: 384 GGYQDRDLSW--EDIAFIRKYISVPIIVKGVQ---SVEDIELCVKAGAEGVLISNHGGRS 438 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIIL 279 + D+ + L RP N+ + GG+R G D++K++ L Sbjct: 439 CDYAPAPIDILYE---------------LRCHRPELFNQIDVLIDGGVRTGADVVKALAL 483 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA G+ PFL + V E L++E +M G +V EL Sbjct: 484 GAKAVGVGRPFLYANGTHGQEGVERVCEILQEEITNTMRNAGATKVSEL 532 >gi|134058564|emb|CAK96451.1| unnamed protein product [Aspergillus niger] Length = 503 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 125/362 (34%), Gaps = 78/362 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +K + R L I VD + LG+ +S P+ +S +G Sbjct: 133 ADDEISKRQGQKAYQKVSFRPRILRSIR--NVDTTTSILGQPVSLPVYMSP-SGIAKFAH 189 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 LAIAA + +A + + M D P+ L + V + Sbjct: 190 PDGECALAIAAGEEGLAQVLANGSSMSIDAVRAAG-----IHPNQPLFQQV-YVNKDIKK 243 Query: 133 GVQKAHQAVHVLGADGLFLHLNP-------LQEIIQPNGNTNFADLS------------- 172 + +AV GA G+++ ++ + E + + D Sbjct: 244 SEETVRRAVKA-GASGIWITVDSPVVGKREMDERLNLEVQVRYCDGLKADSNILQARDSS 302 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + L D+P+++K + C D L + G++ Sbjct: 303 AKGQGVAKTMASSISPYIDWEILTWLRGLTDLPVVIKGIQC---VEDAVLAYQHGVQGIV 359 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGL 267 ++ GG S P ++L R Y Q GG+ Sbjct: 360 LSNHGGRSQDTA------------------QPPLVTLLEIRRYAPYLIESNMQIFIDGGI 401 Query: 268 RNGVDILKSIILGASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R G D+LK++ LGA+ GL PFL A +D AI+ LR+E ++M LG ++ Sbjct: 402 RRGTDVLKALALGATAVGLGRPFLFSLAAGYGADGTRRAIQILRQEIEMNMVFLGVTKLS 461 Query: 326 EL 327 EL Sbjct: 462 EL 463 >gi|323704724|ref|ZP_08116302.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536186|gb|EGB25959.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11] Length = 338 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 116/314 (36%), Gaps = 40/314 (12%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 N K D W + + L ++ +++ S FLG ++ P+ ++ MTG ++ Sbjct: 47 ENIKALDRWKVKLKTLHDVLKPDINTS--FLGFEVKMPVFVAPMTGLKGNAGGYLSEREY 104 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 +A A + G M I ++ LG + Sbjct: 105 DMIVAEACKNVGTIFMSGDANDMDMYPAGID--AIKST-------GVLGIPFSKPRTVDE 155 Query: 136 KAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSK--IALLSSAMDVPLLLKEVG 192 +A A + ++ +I + F S+ I ++ +++PL+LK + Sbjct: 156 IIEKAKIAKEAGAIAFGVDVDGAGLIMMVRSGQFVGPKSRKEIETITKNIELPLILKGI- 214 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 +++ + + ++G + ++ GG D+ DI A Sbjct: 215 --MTTEEAVIAAEAGAKAIVVSNHGGRVLDYTMGTADVLPDI-----------------A 255 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKE 311 + ++ + GG+R G+D+LK + LGA + P + A +A+ + + E Sbjct: 256 KAVGDKIDVLVDGGVRTGIDVLKMLSLGAKAVLIGRPIMIAAHGGGREAIEFYLNKVADE 315 Query: 312 FIVSMFLLGTKRVQ 325 +M L G K ++ Sbjct: 316 LYQAMVLTGCKDLK 329 >gi|206890296|ref|YP_002247929.1| hydroxyacid oxidase 1 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742234|gb|ACI21291.1| hydroxyacid oxidase 1 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 338 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 48/321 (14%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + L + E + SVE G+ LS P++ + +TG M + Sbjct: 44 SFKANIEALNKIKLNLSTIH--DVKEPNTSVEIFGQMLSLPVMAAPITGTTYNMGGAVTE 101 Query: 78 NLAIAAEKTKVAMA-----VGSQRVMFSDHNAIKSFELRQYAPHTVLISN-------LGA 125 ++ MA +G + I ++Q + I + Sbjct: 102 DVYTQEVIAGSLMAGTLGWIGDGADPLMYGSGIN--AIKQNNGKGIPIIKPRTQDEIIKR 159 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 +++ + G + G + L G +I L A +P Sbjct: 160 IRIAEEAGAIAVGVDIDGAGLITMAL-----------KGQPVSPKSPKEIEELVKATKLP 208 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +LK + ++ + E+ G+ ++ GG ++ +I + Sbjct: 209 FILKGI---MTLREAEIAYNMGVAAIVVSNHGGRILDHTPGVAEVLPEITEKLKG----- 260 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAA 304 + IA GG+R+GVD+LK + LGA + P + + + Sbjct: 261 ------------KITIIADGGVRSGVDVLKLLALGADAVLIGRPVVVAVFGGGKEGLKLY 308 Query: 305 IESLRKEFIVSMFLLGTKRVQ 325 E+++ E +M L G V+ Sbjct: 309 FENIKNELKQAMLLTGVASVK 329 >gi|308507173|ref|XP_003115769.1| hypothetical protein CRE_18764 [Caenorhabditis remanei] gi|308256304|gb|EFP00257.1| hypothetical protein CRE_18764 [Caenorhabditis remanei] Length = 371 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 76/363 (20%), Positives = 127/363 (34%), Gaps = 66/363 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 ++ + RN FD + R L S + +D SVE+L GKK+ FP+ I+ KM Sbjct: 32 AEQEETLRRNVSAFDRLLIRPRCL--RSVESIDTSVEWLHGKKVDFPVGIAPTA--FQKM 87 Query: 72 IERINRNLAI---AAEKTKVAMAVGSQRVMFSDHN------------AIKSFELRQYAPH 116 + + L+ AA + + D + ++ R+ Sbjct: 88 ATK-DGELSTVRGAAASKSIMICSSWSTTSIEDIGKEAKIVGATLWFQLYVYKDRKVTEK 146 Query: 117 TV---LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-----EIIQPNGNTNF 168 + + + A+ L D V + L HL + P G+T Sbjct: 147 LIHRAEAAGVEALVLTVDTPV-LGRRLKDTYNKFSLPKHLKFANFESNTQAEMPKGHTGE 205 Query: 169 ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + + +P+++K V G D L L +G+ ++ Sbjct: 206 SGFMQYVSSQIDPSLDWKTLEWIRTKTILPVIVKGVMRG---DDALLALGAGVDGIIVSN 262 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDIL 274 GG I T +L + R GG+RNG DI Sbjct: 263 HGGRQMDSS------------------IATIEALPGVLRAVDKRIPVWMDGGVRNGRDIF 304 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA + P L A S V A + L+ EF SM L G + + EL + + Sbjct: 305 KAVALGARGVFVGRPVLWGLATSGSSGVAAVLGILQSEFRHSMQLSGFRSIAELQKDDQV 364 Query: 334 IRH 336 + H Sbjct: 365 VVH 367 >gi|156035785|ref|XP_001586004.1| hypothetical protein SS1G_13096 [Sclerotinia sclerotiorum 1980] gi|154698501|gb|EDN98239.1| hypothetical protein SS1G_13096 [Sclerotinia sclerotiorum 1980 UF-70] Length = 515 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 122/362 (33%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG--NNK 70 + + N F + L + ++VD + LG K P +++ G + Sbjct: 153 ADDEITMRENHSAFHKIWFRPKIL--VDVEKVDFTTTMLGTKCDIPFYVTATALGKLGHP 210 Query: 71 MIERINRNLAI----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 E + A +A + + + + ++ +L V Sbjct: 211 EGEVVFTRAAKKHNVIQMIPTLASCSFDEIMDAAGESQVQWLQL--------------YV 256 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL-------------- 171 + + + A G GLF+ ++ Q + F D+ Sbjct: 257 NKDREITKKIVQHA-ERRGCKGLFITVDAPQLGRREKDMRSKFTDVGSSVQSSSGQSTDN 315 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I S +P+LLK V D+ ++ G++ ++ Sbjct: 316 SQGAARAISSFIDPALSWKDIPWFQSITKMPILLKGVQR---VEDVIRAVECGVQGVVLS 372 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG S ++ +++ V ++ R + + + GG+R DI+ Sbjct: 373 NHGGRQLDFARSGIEVLAEVMPVLRE------------RGWEDRIEIYIDGGIRRSTDII 420 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA G+ PFL + V A++ L+ E ++M L+G V +L N L Sbjct: 421 KALCLGAKGVGIGRPFLYAMSAYGLAGVDRAMQLLKDEMEMNMRLIGCSSVDQL--NPTL 478 Query: 334 IR 335 I Sbjct: 479 ID 480 >gi|225028667|ref|ZP_03717859.1| hypothetical protein EUBHAL_02946 [Eubacterium hallii DSM 3353] gi|224953977|gb|EEG35186.1| hypothetical protein EUBHAL_02946 [Eubacterium hallii DSM 3353] Length = 349 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 113/324 (34%), Gaps = 50/324 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + D + + E + D S+E G+K +P + ++ Sbjct: 56 RNYDAWKDIRINMDTICE-NVT-PDTSIELFGEKFDYPFFAGPVGAMKLHYGDKYDDLTY 113 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELRQYAPHTVLISNLGAVQLNYDFG 133 N L A +A G ++ + + +++ + V+ Sbjct: 114 NDILVSACAANGIAAFTGDG----TNPDVFKAATAAIKKNHGQG-----IPTVKPWNIET 164 Query: 134 VQKAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 +++ V GA + + ++ L+ + P G+ ++ + +A +P ++ Sbjct: 165 IREKMDMVQDCGAKMVAMDIDAAGLPFLKNLNPPAGSKT----VEQLGEIVNAAGIPFIV 220 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + +G ++ GG + + T Sbjct: 221 KGI---MTVAGAKKAFDAGASAIVVSNHGGRVLDQTPA------------------TAEV 259 Query: 249 LEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 LE + + GG+R G DI K++ +GA +A PF++ + V IE Sbjct: 260 LERIVEWNQGRMKIFVDGGIRQGTDIFKALAMGADAVLIARPFVQAVYGGAEEGVKLYIE 319 Query: 307 SLRKEFIVSMFLLGTKRVQELYLN 330 L E +M + G ++++ + Sbjct: 320 KLAAELSDTMAMCGAASIKDISRS 343 >gi|281341108|gb|EFB16692.1| hypothetical protein PANDA_018385 [Ailuropoda melanoleuca] Length = 340 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 117/325 (36%), Gaps = 48/325 (14%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N F L R L EVD G++++ P+ I+ TG + + + Sbjct: 40 DDNIAAFKKIRLRPRYL--RDVREVDTRTTIQGEEITVPICIAP-TGFHCLVWPDGEMST 96 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSD-----HNAIKSFEL-----RQYAPHTVLISN-LGAVQ 127 A AA+ + + D +K F+L RQ V + LG Sbjct: 97 ARAAQAAGICYITSTYASCTLEDIVATAPRGLKWFQLYVQSDRQLNKQVVQKAESLGFKA 156 Query: 128 LNYDFGVQKA-HQAVHVLGADGLFLHLNPLQEIIQP---NGNTNF-------ADLSSKIA 176 L K ++ L ++L L+++ P N F + + ++ Sbjct: 157 LVITVDTPKIGNRRCDFRNKLDLQMNL-LLKDLRSPKERNSMPYFQMCPIDSSFCWNDLS 215 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L S +P++LK + L+ D EL +K + ++ GG + + D +++ Sbjct: 216 WLQSITRLPIILKGI---LTKEDAELAVKHNVHGIIVSNHGGRQLDDVPASIDALTEV-- 270 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAM 295 + + GG+R G D+LK++ LGA L P L A Sbjct: 271 ---------------VAAVKGKMEVYLDGGIRTGNDVLKALALGAKCVFLGRPILWGLAY 315 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLG 320 V + ++ EF SM L G Sbjct: 316 KGEHGVEEVLNLIKNEFHTSMTLTG 340 >gi|323453515|gb|EGB09386.1| hypothetical protein AURANDRAFT_24176 [Aureococcus anophagefferens] Length = 484 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 132/357 (36%), Gaps = 62/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 C + N+ F + R L + VD + + LG + PL +S +M G ++ Sbjct: 152 ACDELTYQENELAFKRIWMRPRVL--VDVKTVDLTSKILGATVGAPLFLSACAMCGMGHE 209 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E A +A + S + F +Q +P + + V + Sbjct: 210 DGEL---AWAESAAGLDIPFM----SPNLSSKSRSAIFAAQQASPTGHRMFQI-YVNPDR 261 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------------QE-------IIQ 161 D +++ +A G + + ++ QE + Sbjct: 262 DVVLEQ-LRACEAAGVTAVCVTVDSAVAGPRERDQRNKIAMLLKQQAQQESAAKGAKARK 320 Query: 162 PN--GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 P N + A +A S +P++LK V CG D L K+G+ ++ GG Sbjct: 321 PGVYANRDPALNWKDVAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGR 377 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + S + +I + + G+ ++ + GG+R G D++K++ L Sbjct: 378 NMDTARSSIEALPEIISMLTEAGL------------RSKLEVWLDGGIRRGSDVVKALAL 425 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 GA+ G+ P + + + + +E L++E + +M L G R L + +L+ Sbjct: 426 GANACGIGKPAMYGMSCYGAAGITKCVEILKREMVQTMQLCGAPRFDLL--SPSLVD 480 >gi|310792523|gb|EFQ28050.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 525 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 73/372 (19%), Positives = 114/372 (30%), Gaps = 86/372 (23%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRN 78 RN + L R L + V S LG + P+ S +M + E+ Sbjct: 163 RNASSYALIGLRPRVL--VDVASVSTSTAILGTPVRAPIFCSPTAMARLVHPDGEK---E 217 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV----------QL 128 L A + + V S F + F R P A QL Sbjct: 218 LGRACKSAGIPQCV-SVSASF---PLDEIFAARAAHPSLPAAKGAAAAAAPYDAPVFFQL 273 Query: 129 NYDFGVQKAHQAVHVLGAD---GLFLHLNPL------------------QEIIQPNGNTN 167 D K+ + + A LFL ++ I + Sbjct: 274 YVDKDRAKSERLIRSAQAQGVKALFLTVDAPIPGKREADERVRSDESLSSPISGARAGND 333 Query: 168 FADL---------------SSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYF 211 S IA L + +P++LK V + MD E +G+ Sbjct: 334 AKGGALGRIMGSYIDASVNWSDIAWLRRTVPGLPIVLKGVQ---TWMDAERAAGAGVEAI 390 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGL 267 ++ GG S + T + L + C + GG+ Sbjct: 391 VLSNHGGRSLDTSPA------------------TVMVLLELQRNCPHVFDRVEVYVDGGV 432 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI K++ LGA GL L ++ V IE LR E +M + G + ++ Sbjct: 433 SRGTDIFKALCLGAKAVGLGRGLLYSLNYGAEGVERYIEILRDELETTMKMCGVTSLDQV 492 Query: 328 Y---LNTALIRH 336 + LNT + H Sbjct: 493 HPGFLNTLAVDH 504 >gi|168011949|ref|XP_001758665.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690275|gb|EDQ76643.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 123/355 (34%), Gaps = 64/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F+ R L I +VD S LG +S P++++ + + Sbjct: 32 AEDQWTLKENRSAFERIRFRPRIL--IDVTKVDLSTNVLGFNISMPIMVAPTA---MQRM 86 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNA----------IKSFELRQYAPHTVLI 120 + L A A K M + S + A + ++ R V Sbjct: 87 AHPDGELATARATAKAGTIMTLSSWSTSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRR 146 Query: 121 SN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------NPLQE-----I 159 + A+ L D + + + L HL + Q+ Sbjct: 147 AERAGFNAIALTVDTP-RLGRRESDIKNRFALPKHLTLANFEGLDLGQMDKTQDSGLASY 205 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + + L S ++P+L+K V +++ D +L +++G ++ G Sbjct: 206 VAGQIDRSLSW--KDVKWLQSITELPILVKGV---ITAEDTKLAIQNGAAGIIVSNHGAR 260 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSII 278 + + T +LE + GG+R G D+LK++ Sbjct: 261 QLDHVSA------------------TISALEEVVQAAAGRLPVFLDGGVRRGTDVLKALA 302 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 LGAS + P + A D V ++ LR EF ++M L G +V ++ Sbjct: 303 LGASGVFIGRPVVFGLACDGQQGVEKVLQMLRDEFELAMALAGCTKVSDISRAHV 357 >gi|321256970|ref|XP_003193424.1| hypothetical protein CGB_D2490W [Cryptococcus gattii WM276] gi|317459894|gb|ADV21637.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 514 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 118/351 (33%), Gaps = 61/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + R L + VD S E LG K S P+ I++ G Sbjct: 151 ADDEITMRENHNAYHRVWFRPRIL--RNVGTVDYSTEILGFKTSMPVYITATALGKLGHP 208 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E L AA + + + + D + + +QL + Sbjct: 209 EG-EVCLTKAAGEHNIIQMIPTLASCGFDEMV-----------DAAIPGQVQFLQLYVNA 256 Query: 133 GVQKAHQAVH---VLGADGLFLHLNPLQ------------EII----QPNGNTNFA---- 169 ++ + + G LF+ ++ Q E + Q G + Sbjct: 257 DRERTKKIIRHAAKRGIKALFITVDAPQLGRREKDMRTKFEGVASAQQAKGGDKYQRDQG 316 Query: 170 -------------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + S L+ +A + ++LK V C D + ++G+ ++ Sbjct: 317 AARAISSFIDPSLNWSDLKELVDAARGLKIILKGVQC---WEDAVMAAEAGVDGVVLSNH 373 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S L + G M P + GG+R D+LK+ Sbjct: 374 GGRQLDFAPSPLALLPSVVKHLTAHGF-------MNNPLRPRFEIFVDGGVRRATDVLKA 426 Query: 277 IILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 I LGA+ G+ P + + + V A++ L+ EF ++M LLG + + Sbjct: 427 IALGATAVGIGRPMIYAMSTYGKEGVSHALQILKDEFEMNMRLLGAPTMAD 477 >gi|253991395|ref|YP_003042751.1| hypothetical protein PAU_03922 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782845|emb|CAQ86010.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 396 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 117/341 (34%), Gaps = 52/341 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-------- 66 + + N + FDD+ +I L I + D + E LG K+ P+ I M Sbjct: 78 DEWTLRENTRAFDDYQIIPHYLAGI--KDPDTTTELLGSKVDMPIFIPPMAAHGLAHTTA 135 Query: 67 --GNNKMIE----------RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G K N +L A+ +K ++ + + EL A Sbjct: 136 ELGTAKGAANAGTLFTAQTLSNSSLDEIAKVSK----GPKWFQIYFTKDMGINRELIHRA 191 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH--LNPLQEIIQPNGNTNFADLS 172 + + V L ++ G ++A + + + L N + F Sbjct: 192 KAMGATAIVFTVDLEWN-GNREADKRNKFVFPNSLPFPNIPNAPVGATLKEITSIFKRDL 250 Query: 173 S--KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + L+ +P+++K + S+ + + + G ++ GG + + Sbjct: 251 NFKDLEFLAKESGLPIIVKGIQ---SAENAKECVDYGASAIQVSNHGGRQLDTVPAAITS 307 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 GI ++ GG+R GV + K++ LGA + P Sbjct: 308 LP---------GI--------VEAVGSKIPVYLDGGIRRGVHVFKALALGAKAVAIGRPI 350 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A+ + V + + L+ E + M L G ++++ Sbjct: 351 LYGLALGGAPGVTSVLNLLKDELKLCMKLAGCAVIKDIERK 391 >gi|323703740|ref|ZP_08115380.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323531328|gb|EGB21227.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 339 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 40/315 (12%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + L R L + E G KLS P+ + MTG M I+ I Sbjct: 48 NLTALASYSLNMRTLHG--AKDPSTETELFGIKLSSPIQAAPMTGTPYNMGGAISERDFI 105 Query: 82 AAEKTKVAMAVGSQRVMF-------SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 + GS++ +D S A I + + D + Sbjct: 106 G------MIVSGSKQAGTIGWTGDGADPTMYDSGIEAIIAEGGHGIPIIKPRE--QDAII 157 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 ++ +A GA + + ++ + G ++ L A +P +LK + Sbjct: 158 ERIRRA-EAAGAKAVGMDIDGAGLVTMALKGQPVGPKTLEELKELVKATKLPFILKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ + E+ +++G+ ++ GG ++ I Sbjct: 215 -MTVDEAEMAVEAGVSAIVVSNHGGRILDYTPGAAEVLPAIAA----------------- 256 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + A GG+R GVD+LK + LGA + P + A + V ++ + E Sbjct: 257 AVKGKVTIFADGGVRTGVDVLKLLALGADGVLVGRPLVVGAFGGGAEGVKLVLDKMNDEL 316 Query: 313 IVSMFLLGTKRVQEL 327 +M L G + ++++ Sbjct: 317 KQAMILTGCQSIKDI 331 >gi|196012908|ref|XP_002116316.1| hypothetical protein TRIADDRAFT_50856 [Trichoplax adhaerens] gi|190581271|gb|EDV21349.1| hypothetical protein TRIADDRAFT_50856 [Trichoplax adhaerens] Length = 365 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 131/357 (36%), Gaps = 64/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + F + R L I VD S LG+K+ P+ IS + + Sbjct: 29 ADDEETLRDNVEIFKRIRIRPRML--IDVTNVDLSTTILGRKIEMPIGISPTA---MQKL 83 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTVLISNL- 123 + + A AA+ K M + + V + + ++ F+L +P L N Sbjct: 84 AHPDGEIATAQAAKFMKTCMTLSTYSTTSIEDVGVASGDGLRWFQL-YVSPDRELTRNFV 142 Query: 124 ------GAVQLNYDFGVQKA-HQAVHVLGADGLFLHL-------NPLQEIIQPNGNTNFA 169 G L V A ++ + L HL N + + N+ ++ Sbjct: 143 HRAERSGFKALVVTVDVPVAGNRRKEIRQGFDLPPHLHLANFSSNSFKGVDTEVENSGWS 202 Query: 170 D----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + I+ L + + +++K + L++ D ++ GI+ I+ GG Sbjct: 203 NNYQMQIDGSITWESISWLQTITSLQVIVKGI---LTAEDASEAIRRGIKAIWISNHGGR 259 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLE--MARPYCNEAQFIASGGLRNGVDILKSI 277 G+PT + + + +A+ GG R G D+ K++ Sbjct: 260 QLD-------------------GVPTAIEVLPEIVEAVKEQAEIYVDGGFRLGTDVFKAL 300 Query: 278 ILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + P L + SD V ++ L++E +M L G + ++ ++ + Sbjct: 301 ALGARAVFIGRPILWGLCYNGSDGVKKVLQLLKEELQRTMQLAGCTSIGDITPSSVI 357 >gi|242812213|ref|XP_002485912.1| oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] gi|218714251|gb|EED13674.1| oxidoreductase, putative [Talaromyces stipitatus ATCC 10500] Length = 489 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 125/352 (35%), Gaps = 60/352 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + + R L + VD + LG+ +S P+ IS++ G K Sbjct: 144 ADDEYSKAEAELAYRKVLFRPRIL--RNVGRVDTRTQILGQDVSLPIYISAV--GIAKFA 199 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSD---------HNAIKSFELR-----QYAPHT 117 LA AA + +A V ++ M + F+L + + T Sbjct: 200 HPQGECTLAAAAGREGIAQLVATRSSMSIESIMKARTGGPQQPIFFQLYMHKDAKISDAT 259 Query: 118 VLISN---LGAVQLNYDFGVQKAHQAVHVLGA--------DGLFLHLNPLQEIIQPNGNT 166 +L + + + L D V + L A D + P+Q + + +T Sbjct: 260 ILKAVKAGVKGIWLTVDSPVTGKRERDERLKANVDVGEQNDKIGGKGKPVQGVAKTLSST 319 Query: 167 NFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 L I+ + ++PL++K + S D L K + I+ GG S + Sbjct: 320 VSPYLDWDTISYIRKLTNLPLVIKGIQ---SVEDAILAHKHKVNGIVISNHGGRSQDTAQ 376 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGVDILKSIIL 279 + L+L Y + Q GG+R G D++K++ L Sbjct: 377 AP------------------LLTLLEINKYAPQIITDKKMQIFIDGGVRRGTDVVKALAL 418 Query: 280 GASLGGLASPFLKPAM--DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 GA+ G+ PFL IE +R+E +M L+G ++ EL Sbjct: 419 GATAVGMGRPFLYSMSSGYGEAGTRRMIEIMREEIEQNMALVGATKISELRR 470 >gi|66508573|ref|XP_625149.1| PREDICTED: hydroxyacid oxidase 1-like [Apis mellifera] Length = 367 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 133/358 (37%), Gaps = 60/358 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 + + N + F + + R L + + D S LG+K+S PL I+ +M + Sbjct: 31 AGEQFSLKLNTEAFKKYRIRPRFL--RNVSKRDLSTTILGEKISMPLGIAPAAMQRMAHP 88 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMF---SDHNAIKSFELRQYAPHTVLISNLG--- 124 E N A A + + + + + NAIK F+L Y V I+ +G Sbjct: 89 EGECANVRAAQGAGTIYILSTISTSSIEEVAEAAPNAIKWFQLYIYKDRNVTINLVGRAE 148 Query: 125 -----AVQLNYDFGVQKAHQAVHVLGADGLFLHL--------------NP-----LQEII 160 A+ L D + +A + L HL N L E + Sbjct: 149 RAGFKAIVLTVDAPLFGDRRA-DIRNKFSLPHHLRLGNFQGKLSTKINNAESGSGLSEYV 207 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + I L S +P++LK + L+ D +L +++GI ++ G Sbjct: 208 M--NLFDASLTWDDIKWLKSITKLPIILKGI---LTPEDAKLAIENGISAIIVSNHGARQ 262 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 I + + +I + + + GG+R G+D+ K++ LG Sbjct: 263 VDSIPATIEALPEI-----------------VKAVNGKLEIYMDGGIRQGIDVFKALALG 305 Query: 281 ASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + A P L + A +E RKE V+ L G V + + +I+H+ Sbjct: 306 AKMVFTARPLLWGLSYGGERGARAVLEVFRKEIDVAFALTGCATVND--VTKDMIQHE 361 >gi|157821243|ref|NP_001101250.1| hydroxyacid oxidase 1 [Rattus norvegicus] gi|149023391|gb|EDL80285.1| hydroxyacid oxidase 1 (mapped) [Rattus norvegicus] gi|165971303|gb|AAI58805.1| Hydroxyacid oxidase 1 [Rattus norvegicus] Length = 370 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 119/360 (33%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F W L R L + ++D S LG+++S P+ + + + + Sbjct: 31 ANDQETLADNIRAFSRWKLYPRML--RNVADIDLSTSVLGQRVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACQTMGTGMMLSSWATSSIE--------EVAEAGPEALRWMQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + Q +A +G +F+ ++ P Q Sbjct: 137 REVSSQLVKRA-EQMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRMKNFETNDLAFSP 195 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 E + + + + I L +P+++K + G D + +K Sbjct: 196 KGNFGDNSGLAEYVAQAIDPSLSW--DDIKWLRRLTSLPIVVKGILRG---DDAQEAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D +I + + GG Sbjct: 251 GVDGILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 294 VRKGTDVLKALALGARAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|332809864|ref|XP_003308337.1| PREDICTED: LOW QUALITY PROTEIN: hydroxyacid oxidase 2-like [Pan troglodytes] Length = 364 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 114/349 (32%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S P I+ TG + + Sbjct: 42 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISAPXCIAP-TGFHCLVW 98 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V Sbjct: 99 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPVLQ 149 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 150 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 208 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 209 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ LGA Sbjct: 266 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGAK 308 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 309 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|324516219|gb|ADY46462.1| Peroxisomal (S)-2-hydroxy-acid oxidase 2 [Ascaris suum] Length = 372 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 121/365 (33%), Gaps = 75/365 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RNK FD + L IS +D SV+ K FP+ I++ ++ Sbjct: 34 ESSLRRNKFAFDRLLIRPHVLRNIST--IDTSVKIFSKIFDFPIGIAATA------FHKL 85 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 L A + ++ ++ AP + + V ++D Q Sbjct: 86 ADPLGEIATVKAAGEMNSLMICSILSNTKLE--DIASNAPLGTTLWHQLYVFKDHDVTKQ 143 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI-------------------- 175 + G D + L ++ +P N +L + + Sbjct: 144 LLQRIADA-GFDAIVLTVDTPVLGRRPADKRNAFNLPAHLSLANINGANAHMKQTEIGES 202 Query: 176 -------------------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 L +P+++K V + + D ++ ++ G++ ++ Sbjct: 203 AFGSYVQQLFDDSLTFDDLEWLIRESKLPIIVKGV---MRAEDADIAVRCGVKGIIVSNH 259 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILK 275 GG + T L E+ R GG+RNG DI K Sbjct: 260 GGRQLDFTPA------------------TIECLPEIVRVVARRCPVFIDGGVRNGGDIFK 301 Query: 276 SIILGASLGGLASPFLK---PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +I LGA + P L A D V ++ LR EF+ M L G + + E+ Sbjct: 302 AIALGADSVFVGRPILWGLTLAFQGKDGVRHVLQILRDEFLNIMQLAGCRTIDEIRTCKD 361 Query: 333 LIRHQ 337 ++ H+ Sbjct: 362 IVVHE 366 >gi|260892955|ref|YP_003239052.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ammonifex degensii KC4] gi|260865096|gb|ACX52202.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ammonifex degensii KC4] Length = 339 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 117/321 (36%), Gaps = 30/321 (9%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + L R + S D S+E G KL P+L + +TG M ++ Sbjct: 44 SFRANVEALARYRLNLRTIH--SAKNPDTSLELFGLKLQTPILSAPITGTTYNMGGALSE 101 Query: 78 NLAIAAEKTKVAMAVG-SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 I A T MA +D S A I + + V++ Sbjct: 102 REFIGAVITGSKMAGSLGFSGDGADPTMYDSGIEAISAEGGWGIPIIKPR--AQEAIVER 159 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 +A GA + + ++ I G+ ++ L + +P +LK + + Sbjct: 160 IRRA-EKAGAPAVGVDIDGAGLITMALKGHPVEPKTLDELKELIRSTRLPFILKGI---M 215 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + + EL +++G ++ GG ++ +I R Sbjct: 216 TVDEAELAVEAGAAAIVVSNHGGRILDHTPGVAEVLPEI-----------------VRAV 258 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIV 314 + +A GG+R+GVD LK + LGA + P + A + V +E + +E Sbjct: 259 GDRIVVLADGGVRSGVDALKLLALGARAVLVGRPIVIGAFGGGAEGVKLVLEQMTEELRQ 318 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M L G +++ + ++R Sbjct: 319 AMILTGCSSLRD--ASPRILR 337 >gi|145601725|ref|XP_001403132.1| hypothetical protein MGG_14264 [Magnaporthe oryzae 70-15] gi|145010236|gb|EDJ94892.1| hypothetical protein MGG_14264 [Magnaporthe oryzae 70-15] Length = 509 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 78/361 (21%), Positives = 118/361 (32%), Gaps = 72/361 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N+ F L R L + + LG + P IS +M + E L Sbjct: 156 NQSFLRRIMLRPRVL--RDVAQTSMRRKILGYDSAVPFFISPAAMARLAHPDGEM---AL 210 Query: 80 AIAAEKTKVAMAVG-------SQRVMFSD-------------HNAIKSFEL-----RQYA 114 A A K V + S SD F+L R Sbjct: 211 ARGAAKEGVIQCISNNASYPLSAIASASDSLPADELHELTARPRQTFFFQLYVNHERHKT 270 Query: 115 PHTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL------NPLQEIIQPNGN 165 + + + A+ + D V +A + A+ + + N + Sbjct: 271 ADLLRKARDLGIKAIFVTVDAPVPGKREADERIAAEAIASAVSGAVASNDKKGGGMGRLM 330 Query: 166 TNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + IA + +P++LK V S+ D L +K G ++ GG S Sbjct: 331 AAYVEKRLIWEDIAWIKEVSGLPVILKGVQ---SAEDARLAVKYGCEGIMLSNHGGRSLD 387 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P L L YC E + I GG + G DILK+I Sbjct: 388 TS------------------QPAILVLLELHKYCPEVFDHLEVIVDGGFQRGSDILKAIC 429 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIR 335 LGA+ G+ PFL + + L+ E VSM L G + E + +NTA I Sbjct: 430 LGATAVGIGRPFLYSLAYGEEGCAHLCQILKDELEVSMKLCGINSLDEAHPGLVNTADIE 489 Query: 336 H 336 H Sbjct: 490 H 490 >gi|156408726|ref|XP_001642007.1| predicted protein [Nematostella vectensis] gi|156229148|gb|EDO49944.1| predicted protein [Nematostella vectensis] Length = 358 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 113/354 (31%), Gaps = 67/354 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + NK F + R L + VD S LG +S P+ IS + + Sbjct: 33 EEKTLQENKNAFKRLKIRPRVL--MGISSVDMSTTLLGHPVSMPIGISPTA------LHK 84 Query: 75 INRNLAIAA-----------EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL 123 I A +A + V + ++ K F + L S + Sbjct: 85 IAHKDGEVATVKAAGSADTCMVLSIASTCTLEDVASASPHSPKWFLIYMLYDKEYLKSLI 144 Query: 124 GAVQLNYDFGVQKAHQAVHV------------------LGADGLFLHLNPLQEIIQPNGN 165 D G Q V G+ L ++ Sbjct: 145 KRA---EDCGFQAIVFVVDAPITGESYDGMRNRKRNIPFLPPGITPPLLDFSKMKGKGNK 201 Query: 166 TNFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 +F+D+ + L +PL+LK + ++ D +L + G+ ++ GG Sbjct: 202 NSFSDVIEHNISWETVNWLKKQTKLPLVLKGI---MTGEDAKLAVDHGVDAIIVSNHGGR 258 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + D+ +I + + GG+ G D+ K++ L Sbjct: 259 QLDSVSATIDVLPEI-----------------VDAVQGKLEVYMDGGVTLGTDVFKALAL 301 Query: 280 GASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA L A + V +E LR+E +M+L G + V ++ N Sbjct: 302 GARAVFLGRAVIWGLACKGEEGVSYILELLREELRKAMWLSGCRSVGDISRNHV 355 >gi|121706678|ref|XP_001271593.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] gi|119399741|gb|EAW10167.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] Length = 495 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 113/343 (32%), Gaps = 67/343 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 + NK FD R L + VD S + LG S PL +S M + I Sbjct: 145 NANKSCFDRIWFRPRVL--RNVRSVDSSSKILGIDSSLPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKS-------FELRQYAPHTVLI------ 120 +A A E + V + + A S + R L+ Sbjct: 198 ECAIAKACESRGIMQGVSNNSSYTLEELTQAAPSANFFFQLYVNRDREKSAALLRKCSAN 257 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------- 171 N+ A+ + D +A + AD +L+ + + L Sbjct: 258 PNVKAIFVTVDAAWPGKREADERVKAD---ENLSVPMAPSRVKNDKKGGGLGRVMAGFID 314 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 315 PGLTWEDLVWVRKHTRLPVCLKGV---MSADDAILAMQAGLDGILLSNHGGRNLDTSP-- 369 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P+ ++L C E + G+R G DILK+I LGA+ Sbjct: 370 ----------------PSIVTLLELHKRCPEIFGKMEIYVDSGIRRGTDILKAICLGATA 413 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+ L + V I+ ++ E +M G + + Sbjct: 414 VGMGRSMLFATNYGQEGVEHLIDIMKDELETAMRNNGITTLDQ 456 >gi|134299120|ref|YP_001112616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum reducens MI-1] gi|134051820|gb|ABO49791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfotomaculum reducens MI-1] Length = 340 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 116/322 (36%), Gaps = 38/322 (11%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N ++L R L + E G L+ P++ + MTG M + Sbjct: 48 NLNALASYNLNMRTLH--NAKNPSTETELFGVALTSPIMAAPMTGTPYNMGGSL------ 99 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-----LGAVQLNYDFGVQK 136 +EK ++M V + + + Y I+N + ++ + + Sbjct: 100 -SEKEFISMIVSGSKQAGTLGWTGDGADPEMYNSGLEAITNEQGYGIPIIKPREQNVIIE 158 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 GA + + ++ + G +I L +A +P +LK + + Sbjct: 159 CIGRAERAGAKAVGVDIDGAGLVTMALKGQPVGPKSKREIKELVNATKLPFILKGI---M 215 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + + E+ +++G+ ++ GG D+ I Sbjct: 216 TVDEAEMAVEAGVSAIVVSNHGGRILDFTPGAADVLPAIAA-----------------AV 258 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIV 314 + +A GG+R GVD+LK + LGA + P + A ++ V IE + E Sbjct: 259 KGKVTILADGGVRTGVDVLKLLALGADGVLVGRPLVVGAFGGHTEGVKFLIEKMTSELKQ 318 Query: 315 SMFLLGTKRVQELYLNTALIRH 336 +M L G ++E+ N ++I + Sbjct: 319 AMILTGCNTIKEI--NDSVIYN 338 >gi|302881067|ref|XP_003039455.1| hypothetical protein NECHADRAFT_56146 [Nectria haematococca mpVI 77-13-4] gi|256720300|gb|EEU33742.1| hypothetical protein NECHADRAFT_56146 [Nectria haematococca mpVI 77-13-4] Length = 489 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 115/354 (32%), Gaps = 71/354 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N FD L R L I +V LG + P IS + + +A Sbjct: 149 NAACFDQIMLRPRML--IDVTKVSTEQTILGCRTGVPFYISPAA---MAKLVHPDGEIA- 202 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP----HTVLISNLGAVQLNYDFGVQKA 137 A + + + S+ + + H L V + + Sbjct: 203 VARGCG-------ENNVIQAISTSASYPVDEIVKAGGSHQPFFFQL-YVNKDRTKS-EDL 253 Query: 138 HQAVHVLGADGLFLHLNPL-------------QEIIQ------PNGNTNFADL------- 171 V LG +F+ ++ Q+ +Q GN Sbjct: 254 LARVKALGVRAIFVTIDSPVPGKREADERAKDQDDVQVPDSFKGKGNQKSGGYARSIGGY 313 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 IA L P++LK V +++MD +L ++ + ++ GG + Sbjct: 314 VDASLNWGDIAWLRKHWSGPIVLKGV---ITAMDAKLAVEHKLEGIVLSNHGGRNLDTSP 370 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ ++ + + GG+R G DI K++ LGA G Sbjct: 371 ASILVLLELQK--------------SCPEVFDKLEVLIDGGIRRGTDIFKALCLGAKGVG 416 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + FL + + I+ L+ E +M L G + +++ +NT I H Sbjct: 417 VGRGFLYALDYGQEGIEKYIQILKDELETTMRLCGITHLSQVHPGLVNTLAIDH 470 >gi|39651869|emb|CAD92862.1| isopentenyl-diphosphate delta-isomerase [Natronorubrum sp. Tenzan-10] Length = 137 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 82/136 (60%), Gaps = 5/136 (3%) Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV--MFSDHNAIKSFEL-RQYAPHTVL 119 SMTGG+ +INR LA AA++ VAM VGSQR D + ++S+ + R AP +L Sbjct: 3 SMTGGHPNTT-KINRKLAEAAQQMNVAMGVGSQRAGLELDDEDLLESYTVVRDVAPDALL 61 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 N+GA QL ++ V +AV ++ AD + +HLN LQE +QP G+ + + I ++ Sbjct: 62 YGNVGAAQL-LEYDVDDVERAVEMIDADAMAIHLNFLQEAVQPEGDVDARGCLAAIEQVA 120 Query: 180 SAMDVPLLLKEVGCGL 195 S + VP+++KE G G+ Sbjct: 121 SDLSVPVVVKETGNGI 136 >gi|238491176|ref|XP_002376825.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] gi|220697238|gb|EED53579.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] Length = 365 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 111/344 (32%), Gaps = 63/344 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 N+ FD + + R L +D S FLG+K+S P+ + + + + Sbjct: 42 SENETAFDRFKIRPRIL--CDVSNIDTSTTFLGEKVSLPIGFAP---TCIQCLAHPDGEA 96 Query: 80 A--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A AA + + M + + + + R+ + + + + Sbjct: 97 ATSRAATQLNIPMVLSTFSTV----SLEDVISERKEGQNPYAFQPIFPRDRSR--TLDWM 150 Query: 138 HQAVHVLGADGLFLHLNP-------------LQ---EIIQPNGNTNF------------A 169 +A G +F+ ++ LQ + PN + N Sbjct: 151 KRA-EKSGYKAIFITVDAPVTANRLRKKRKSLQLPPHLSYPNLSDNSDRSSDKSGHDPGK 209 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + + + + +K + C D+ + G+ I+ GG + + D Sbjct: 210 RWDEVIPWVKANTSLEVWVKGISC---PYDVLKAIDYGLDGLVISSHGGRQLDGVAAAID 266 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS- 288 + ++ + + G+R G D+ +++ LGA + L Sbjct: 267 VLAECAPL-----------------AKGRIKIGFDSGIRRGADVFRALALGADICFLGRI 309 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 P A D V A+ L +E +M G ++E+ Sbjct: 310 PLWGLAYDGQAGVELAVRILEEELRNTMAHAGCASLKEISRTHV 353 >gi|302881054|ref|XP_003039449.1| hypothetical protein NECHADRAFT_56158 [Nectria haematococca mpVI 77-13-4] gi|256720293|gb|EEU33736.1| hypothetical protein NECHADRAFT_56158 [Nectria haematococca mpVI 77-13-4] Length = 489 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 115/354 (32%), Gaps = 71/354 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N FD L R L I +V LG + P IS + + +A Sbjct: 149 NAACFDQIMLRPRML--IDVTKVSTEQTILGCRTGVPFYISPAA---MAKLVHPDGEIA- 202 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP----HTVLISNLGAVQLNYDFGVQKA 137 A + + + S+ + + H L V + + Sbjct: 203 VARGCG-------ENNVIQAISTSASYPVDEIVKAGGSHQPFFFQL-YVNKDRTKS-EDL 253 Query: 138 HQAVHVLGADGLFLHLNPL-------------QEIIQ------PNGNTNFADL------- 171 V LG +F+ ++ Q+ +Q GN Sbjct: 254 LARVKALGVRAIFVTIDSPVPGKREADERAKDQDDVQVPDSFKGKGNQKSGGYARSIGGY 313 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 IA L P++LK V +++MD +L ++ + ++ GG + Sbjct: 314 VDASLNWGDIAWLRKHWSGPIVLKGV---ITAMDAKLAVEHKLEGIVLSNHGGRNLDTSP 370 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ ++ + + GG+R G DI K++ LGA G Sbjct: 371 ASILVLLELQK--------------SCPEVFDKLEVLIDGGIRRGTDIFKALCLGAKGVG 416 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + FL + + I+ L+ E +M L G + +++ +NT I H Sbjct: 417 VGRGFLYALDYGQEGIEKYIQILKDELETTMRLCGITHLSQVHPGLVNTLAIDH 470 >gi|73991333|ref|XP_859787.1| PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 2 [Canis familiaris] Length = 375 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 121/358 (33%), Gaps = 75/358 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + E+D S LG+++S P+ + + + + Sbjct: 31 ANDQETLADNIAAFSRWKLYPRML--RNVAEIDLSTSVLGQRVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 ++ LA A M + S + E+ + +P + L + + Sbjct: 86 AHVDGELATVRACRSLGTGMMLSSWSTSSIE-------EVAEASPDALRWLQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQPNGNTNF----- 168 + Q +A G +FL ++ P Q + N TN Sbjct: 138 EVTKQLVQRA-ERKGYKAIFLTVDTPYLGNRFDDVRNRFKLPPQ-LRMKNFETNDLAFSP 195 Query: 169 -------ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + L I L +P++ K + G D + +K G+ Sbjct: 196 KENFGDNSGLATYVAKSIDPSISWEDIKWLRGLTSLPIVAKGILRG---DDAKEAVKHGL 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + L+ + S+ R + + GG+R Sbjct: 253 NGILVSNHGARQLDGVPATVKLQIEFM------------SIVKRRFLDRKVEIFLDGGVR 300 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 301 KGTDVLKALALGAKAVFVGRPVIWGLASQGEKGVQDVLEILKEEFRLAMALSGCQNVK 358 >gi|6754156|ref|NP_034533.1| hydroxyacid oxidase 1 [Mus musculus] gi|13124296|sp|Q9WU19|HAOX1_MOUSE RecName: Full=Hydroxyacid oxidase 1; Short=HAOX1; AltName: Full=Glycolate oxidase; Short=GOX gi|4585221|gb|AAD25332.1|AF104312_1 glycolate oxidase [Mus musculus] gi|74146415|dbj|BAE28963.1| unnamed protein product [Mus musculus] gi|110645780|gb|AAI19537.1| Hydroxyacid oxidase 1, liver [Mus musculus] gi|111601357|gb|AAI19536.1| Hydroxyacid oxidase 1, liver [Mus musculus] gi|123232007|emb|CAM22526.1| hydroxyacid oxidase 1, liver [Mus musculus] gi|148696426|gb|EDL28373.1| hydroxyacid oxidase 1, liver [Mus musculus] Length = 370 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 119/360 (33%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F W L R L + ++D S LG+++S P+ + + + + Sbjct: 31 ANDQETLADNIQAFSRWKLYPRML--RNVADIDLSTSVLGQRVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACQTMGTGMMLSSWATSSIE--------EVAEAGPEALRWMQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + Q +A G +F+ ++ P Q Sbjct: 137 REISRQIVKRA-EKQGYKAIFVTVDTPYLGNRIDDVRNRFKLPPQLRMKNFETNDLAFSP 195 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 E + + + + I L +P+++K + G D + +K Sbjct: 196 KGNFGDNSGLAEYVAQAIDPSLSW--DDITWLRRLTSLPIVVKGILRG---DDAKEAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 251 GVDGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 294 VRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|73991335|ref|XP_859819.1| PREDICTED: similar to hydroxyacid oxidase 1 isoform 3 [Canis familiaris] Length = 363 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 114/343 (33%), Gaps = 57/343 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + E+D S LG+++S P+ + + + + Sbjct: 31 ANDQETLADNIAAFSRWKLYPRML--RNVAEIDLSTSVLGQRVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVL 119 ++ LA A M + S + A S ++ R+ V Sbjct: 86 AHVDGELATVRACRSLGTGMMLSSWSTSSIEEVAEASPDALRWLQLYIYKDREVTKQLVQ 145 Query: 120 ISN---LGAVQLNYDFG-----VQKAHQAVHV-----LGADGLFLHLN---PLQEIIQPN 163 + A+ L D + L L + N L + + Sbjct: 146 RAERKGYKAIFLTVDTPYLGNRFDDVRNRFKLPPQLRLKIYALLISSNNNSGLATYVAKS 205 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + + I L +P++ K + G D + +K G+ ++ G Sbjct: 206 IDPSISW--EDIKWLRGLTSLPIVAKGILRG---DDAKEAVKHGLNGILVSNHGARQLDG 260 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + D +I + + GG+R G D+LK++ LGA Sbjct: 261 VPATIDALPEI-----------------VEAVEGKVEIFLDGGVRKGTDVLKALALGAKA 303 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + P A V +E L++EF ++M L G + V+ Sbjct: 304 VFVGRPVIWGLASQGEKGVQDVLEILKEEFRLAMALSGCQNVK 346 >gi|210609777|ref|ZP_03288109.1| hypothetical protein CLONEX_00293 [Clostridium nexile DSM 1787] gi|210152779|gb|EEA83785.1| hypothetical protein CLONEX_00293 [Clostridium nexile DSM 1787] Length = 338 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 119/322 (36%), Gaps = 46/322 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 RN + + D + L + +VD S+ GK +P + N E+ N Sbjct: 47 RNYEKWKDIRINMDTL--CANKKVDTSLNIFGKSFRYPFFAGPVGAVNLHYGEKYNDASY 104 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 L A K +A G + +D + +++ A + V+ V+ Sbjct: 105 NEVLVSACAKAGIAAMTGD--GVNADVMKCATEAIKKSAGIG-----IPTVKPWNLETVK 157 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + V GA + + ++ L+ + P G + ++ ++++ P ++K Sbjct: 158 EKMRLVEDSGAFAVAMDVDAAGLPFLKNMTPPAGRKS----VEELHKIAASTRAPFIVKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ +G ++ GG + + T LE Sbjct: 214 I---MTVRGALKAEAAGADAIVVSNHGGRVLDQCPA------------------TAEVLE 252 Query: 251 M-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 A+ + + GG+R+GVD+ K++ LGA + PF+ A D V IE + Sbjct: 253 EIAKAVKGKMKIFVDGGIRSGVDVFKALALGADGVIICRPFVTAAYGGGTDGVQLYIERI 312 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 E +M + G ++E+ + Sbjct: 313 GSELADTMAMCGANSLKEITKD 334 >gi|154278643|ref|XP_001540135.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413720|gb|EDN09103.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 511 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 121/353 (34%), Gaps = 64/353 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD L R L + EV+ + LG ++ PL +S M++ I + Sbjct: 148 DANKSFFDRTWLRPRVL--RNVKEVNTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 78 NLA--IAAEKTKVAMAVG-SQRVMFSDHNAIKS--------FELRQYAPHTVLI------ 120 LA A + + S D A + + A + Sbjct: 201 ELAVSRACGTRGIMQGISNSASYPMKDITAAGPRANYFFQLYVNKDRAKSAAQLRECSEN 260 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-------GLFLHLNPLQEIIQPNGNTNFAD--- 170 + A+ + D +A + AD N + F D Sbjct: 261 PRIRAIFITVDAAWPGKREADERVRADENLSVPMSAQRAQNDSKGGGLGRVMGGFIDPAL 320 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 321 TWEDLVWARKHTHLPLVLKGV---MSADDAMLAMKAGLDGILLSNHGGRNLDTSP----- 372 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P ++L C E + GG+R G DILK++ LGA+ G+ Sbjct: 373 -------------PALVTLLELHKRCPEIFDKIEIYVDGGIRRGTDILKAVCLGATAVGM 419 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L A + V + + E +M L+G + + + +NTA I H Sbjct: 420 GRSVLFAAAYGQEGVEHLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|260791281|ref|XP_002590668.1| hypothetical protein BRAFLDRAFT_89469 [Branchiostoma floridae] gi|229275864|gb|EEN46679.1| hypothetical protein BRAFLDRAFT_89469 [Branchiostoma floridae] Length = 347 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 117/335 (34%), Gaps = 56/335 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N F + LI R L ++S D SV LG KL P+ I+ Sbjct: 32 AGTGQTYQDNMDAFRRYRLIPRNLRDVSIR--DTSVTVLGSKLDIPVAIAPTA---IHRF 86 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVL 119 + LA A A M +GS + + A + + R + + Sbjct: 87 AHPDAELATAKGAAAMNAGMVLGSWSIHSLEEVAAATPGGIHWFYMLFYNDRGHMKRQLD 146 Query: 120 I---SNLGAVQLNYD---FGVQKAHQAVHVLGADGLFLHL---NPLQ-----EIIQP--N 163 + A+ L D F A A F ++ +P Q E Q Sbjct: 147 RTERAGYSAIFLTIDQPFFPNPSARAAPRSYPFTMRFPNIFETDPPQAFGTAEYRQSLME 206 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 +A + + +P++LK V LS+ D +L + G++ ++ GG Sbjct: 207 LVREYATWED-VEWVVGNTRLPVVLKGV---LSAEDAKLAVDRGVKGIYVSNHGGRELDG 262 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + D+ I R EA+ GG+R G D+LK++ LGA Sbjct: 263 VPATIDVLPHI-----------------VRAVDGEAEVYLDGGVRTGTDVLKALALGARC 305 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMF 317 + P L A + ++ V ++ L +E +M Sbjct: 306 VFIDRPVLWGLAHNGAEGVQQVLQILTQELSQAMA 340 >gi|297279703|ref|XP_001113689.2| PREDICTED: hydroxyacid oxidase 2 isoform 2 [Macaca mulatta] Length = 364 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 118/342 (34%), Gaps = 50/342 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 D N F HL R L EVD G+++S P+ I+ TG + Sbjct: 42 ADDSVTRDDNIAAFKRIHLRPRYL--RDVSEVDTRTTIQGEEISAPICIAP-TGFHCLVW 98 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQR---VMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + A AA + S ++ + ++ F+L P L N + Sbjct: 99 PDGHVLCFAAAQAAGICYITSTFASCSLEDIVIAAPEGLRWFQL-YVHPDLQL--NKQLI 155 Query: 127 QLNYDFGVQKA----------HQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-------A 169 Q G + ++ + L L LQ + N F + Sbjct: 156 QRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNSIPYFQMTPISTS 215 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ S +P++LK + L+ D EL +K ++ ++ GG + + D Sbjct: 216 LCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASID 272 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 +++ + + GG+R G D+LK++ LGA L P Sbjct: 273 ALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALALGARCIFLGRP 315 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A V + L EF SM L G + V E+ N Sbjct: 316 ILWGLAYKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 357 >gi|164663435|ref|XP_001732839.1| hypothetical protein MGL_0614 [Malassezia globosa CBS 7966] gi|159106742|gb|EDP45625.1| hypothetical protein MGL_0614 [Malassezia globosa CBS 7966] Length = 493 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 108/342 (31%), Gaps = 55/342 (16%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 NK F R L + VDPS LG P+ I++ G ++ Sbjct: 140 ETYHENKTVFRRIWFRPRILRNVRV--VDPSTSILGIPSKLPIYITATALG--RLGHPDG 195 Query: 77 R-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 NL AA KT + V + S + R L V + V Sbjct: 196 ELNLTRAAAKTGLIQMVPT----LSSCSFEDIVNARTEDGAPTQFFQL-YVNSDRRVVVD 250 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL------------------------ 171 +A +F+ ++ Q + Sbjct: 251 MLRRA-EKANIQAIFITVDAPQLGRREKDMRMHFSDEGSNVQGGEIQNRDEGAARAISSF 309 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +P+LLK V + D + + G ++ GG Sbjct: 310 IDPALDWDGALWIKRNTRIPVLLKGVQ---TWEDAVMACEMGFAGVVLSNHGGRQLDYAR 366 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S ++ ++ + + Q + GG R G DILK+I +GA+ G Sbjct: 367 SGVEVLEEVVRELR----------KRNMFPSPAFQILVDGGFRRGTDILKAIAMGATAVG 416 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + PFL + D VV AI LR E ++M L+G +++ Sbjct: 417 VGRPFLYAYSAYGVDGVVHAINLLRAELEMNMRLIGANTIRD 458 >gi|147789493|emb|CAN67413.1| hypothetical protein VITISV_005886 [Vitis vinifera] Length = 371 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 76/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLYQNRHAFSQILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A AA T M + S + + + A I Sbjct: 85 HPEGEYATARAASATGTIMTLSS----------WATSSVEEVASTGPGIRFFQLYVYKDR 134 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----QEIIQPNG--------NTNFADL-------- 171 V + + G + L ++ +E N NF L Sbjct: 135 HVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKA 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L + ++P+L+K V L++ D L +++G + Sbjct: 195 DDSGLASYVAGQIDRTLSWKDVKWLQTITNLPILVKGV---LTAEDTRLAIQAGAAGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T ++LE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TIMALEEVVKAAQGRVPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGAS + P + A + V ++ LR+EF ++M L G + ++E+ + Sbjct: 294 VFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDH 353 Query: 332 ALIRHQ 337 + + Sbjct: 354 IVTEWE 359 >gi|15231789|ref|NP_188029.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|75335069|sp|Q9LJH5|GLO4_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; AltName: Full=Glycolate oxidase 4; Short=AtGLO4; Short=GOX 4; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO4 gi|9294638|dbj|BAB02977.1| glycolate oxidase [Arabidopsis thaliana] gi|27754229|gb|AAO22568.1| putative glycolate oxidase [Arabidopsis thaliana] gi|332641954|gb|AEE75475.1| Aldolase-type TIM barrel family protein [Arabidopsis thaliana] Length = 363 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 108/356 (30%), Gaps = 59/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N + F R L + +D S LG +S P++I+ + Sbjct: 30 AEDQHTLNENVQAFRRIMFRPRVL--VDVSNIDMSTSMLGYPISAPIMIAPTA------M 81 Query: 73 ERINRNLAIAAEKT------KVAMAVGSQRVMFSDHN---------AIKSFELRQYAPHT 117 ++ A + + + I ++ R Sbjct: 82 HKLAHPKGEIATAKAAAACNTIMIVSFMSTCTIEEVASSCNAVRFLQIYVYKRRDVTAQI 141 Query: 118 VLIS-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------- 167 V + G + V + + + + L + ++ N Sbjct: 142 VKRAEKAGFKAIVLTVDVPRLGRREADIKNKMISPQLKNFEGLVSTEVRPNEGSGVEAFA 201 Query: 168 -----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + I L S +P+L+K + L+ D +++G+ ++ G Sbjct: 202 SSAFDASLSWKDIEWLRSITKLPILVKGL---LTREDALKAVEAGVDGIVVSNHGARQLD 258 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + ++ + GG+R G D+ K++ LGA Sbjct: 259 YSPATITVLEEV-----------------VHAVKGRIPVLLDGGVRRGTDVFKALALGAQ 301 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + A D V I+ L+ EF ++M L G + ++ N ++ Sbjct: 302 AVLIGRPIVYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDVTRNHVRTENE 357 >gi|295659458|ref|XP_002790287.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226281739|gb|EEH37305.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 499 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 123/356 (34%), Gaps = 70/356 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FFD R L + V+ + + LG S PL +S M + I Sbjct: 148 DANKSFFDRTWFRPRVLRK--VRNVNTNTKILGCDSSMPLFVSPAA-----MAKLIHPDG 200 Query: 76 NRNLAIAAEKTKVAMAVG-SQRVMFSD-----HNAIKSFE--LRQYAPH-------TVLI 120 +A A E + + S D A F+ + + P Sbjct: 201 ELAIARACESRLIIQGISNSASYSMKDITAAGPQANYFFQLYVNKDRPKSAAHLHECSED 260 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------- 171 + AV + D +A + AD + + P+ E +++ L Sbjct: 261 PRIRAVFITVDAAWPGKREADERVRADE-SISV-PMSE-QWARNDSHGGGLARSMSGFID 317 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 318 PSLSWEDLVWARKHTHLPLILKGV---MSADDAMLAMKAGLDGILLSNHGGRNLDTSP-- 372 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P L+L C E + GG+R G DILK++ LGA+ Sbjct: 373 ----------------PALLTLLELHKRCPEIFDKMEIYLDGGIRRGSDILKAVCLGATA 416 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 G+ L + V + ++ E +M L+G + E +NTA I H Sbjct: 417 VGMGRSVLFATNYGQEGVEHLFDIMKDELEGAMRLVGITSLDEARPELVNTADIDH 472 >gi|134080800|emb|CAL00914.1| unnamed protein product [Aspergillus niger] Length = 387 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 118/353 (33%), Gaps = 85/353 (24%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 + N+ ++ + L+ R L ++ +D S GKK+ FPL + ++ Sbjct: 60 SLKDNEAAYNRYKLLPRVLRDVDV--LDTSTTIFGKKVKFPLGFAP------AAAHKLAH 111 Query: 78 NLAI-----AAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 AA + M + S D A + N A+Q+++ Sbjct: 112 ADGEVGTSRAAAAHDIPMCLSSWATTGIDDVIAQGT-------------GNPYAMQVSFF 158 Query: 132 FGVQKAHQAV---HVLGADGLFLHLN------------------------PLQEIIQPNG 164 V+ + + G LF+ ++ L E I G Sbjct: 159 KDVEITRRIIQKAEKAGYKALFVSVDLPVLGNRLNESRNNFNFPSDMRFPVLAEGINEMG 218 Query: 165 NTNFAD--------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + IA L + + LK V S DI+L + I I+ Sbjct: 219 LKDSYERGYDGTIRWDKTIAWLRQNTKLEIWLKGV---YSPEDIQLAIDHKIDGVIISNH 275 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILK 275 GG + + T +L + P + GG+R G D+ K Sbjct: 276 GGRQLDGVPA------------------TLDALRICAPVAKGKIPLAVDGGIRRGADVFK 317 Query: 276 SIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +I LGAS+ + P A + V A++ L EF +M L G + + ++ Sbjct: 318 AIALGASMCFVGRIPIWGLAYNGEKGVDLAVKILYDEFCRTMKLAGCRTIADI 370 >gi|260786703|ref|XP_002588396.1| hypothetical protein BRAFLDRAFT_63347 [Branchiostoma floridae] gi|229273558|gb|EEN44407.1| hypothetical protein BRAFLDRAFT_63347 [Branchiostoma floridae] Length = 371 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 122/352 (34%), Gaps = 70/352 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL-- 79 N++ F + LI R L ++ D SV LG KL FP+ I+ ++ L Sbjct: 41 NRRAFKRYRLIPRNLRDVYIR--DTSVTILGTKLDFPVAIAPTA---THLLFHPEAELTT 95 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT-----VLISNLGAVQLNYDFGV 134 A A M + S ++ + AP +L Sbjct: 96 ARGAASMNTLMVLSSWSHHSLK-------QVAEAAPRGVRWFYMLFYRDRGRMKRLLERA 148 Query: 135 QKAHQAVHVLGADGLFLHL----------------------NPLQEIIQPNGNTNFADL- 171 ++A A VL AD F NP + F Sbjct: 149 ERAGYAAIVLTADQPFFTFSFRKVATTLPLDFRFPNIYLDDNPPGPLGSLELAEYFKKTV 208 Query: 172 -----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + +P++LK + LS D ++ ++ GI ++ GG + + Sbjct: 209 KEAATWEDVEWVKKNTRLPVVLKGI---LSVDDAKMAVRLGIDAILVSNHGGRQLDGVPA 265 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D+ DI EA+ GG+R G D+LK++ LGA + Sbjct: 266 TIDVLPDI-----------------VGAVGGEAEVYLDGGVRTGTDVLKALALGARCVFI 308 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L A + ++ V ++ L+ E ++M G ++ ++ + L+ HQ Sbjct: 309 GRPALWGLAYNGAEGVQQVLKILKDELSLAMARAGCAKIPDIQRS--LVVHQ 358 >gi|59040377|gb|AAW83791.1| putative isopentenyl-diphosphate delta-isomerase [Legionella pneumophila] Length = 150 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 3/144 (2%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 RK DHI + FD + L+H ALP++ F ++ K + P +IS Sbjct: 9 EQRKRDHIELALMPANQSSELNPFDHFSLVHEALPDLDFKDISIQSIRFKKPVEKPFIIS 68 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS 121 SMT G++ +E IN L A KTK AM VGSQR +D A + LR+ P L S Sbjct: 69 SMTAGHSNALE-INYRLMEACSKTKWAMGVGSQRRELTDKQAAFEWTPLRRDFPMVSLFS 127 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLG 145 NLG QL D + + + L Sbjct: 128 NLGIAQL-IDTPISAIQRLIDTLQ 150 >gi|298528158|ref|ZP_07015562.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfonatronospira thiodismutans ASO3-1] gi|298511810|gb|EFI35712.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfonatronospira thiodismutans ASO3-1] Length = 340 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 113/327 (34%), Gaps = 36/327 (11%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N K + L RA+ + D + G+ P++ + MTG M +I Sbjct: 43 EAFKVNLKALARYRLRMRAVHG--VKKPDTGIRLWGRDFKTPIMAAPMTGTTYNMGGQIT 100 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFS----DHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I ++ ++ S + FS D S I + + Sbjct: 101 EQEFI---DHIISGSIDSGSIGFSGDGADPAMFDSGVQAIKNNQGQGIPIIKPR--AQEE 155 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEV 191 V++ A GA + + ++ + G +I L + D+P +LK + Sbjct: 156 IVKRIRSA-EEAGAMAVGVDIDGAGLVTMALKGQAVGPKDKHEIKELVQSTDLPFVLKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D L++G+ ++ GG ++ +I + Sbjct: 215 ---MTIDDALDALEAGVSTIVVSNHGGRVLDHTPGAAEVLPEISEM-------------- 257 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 IA GG+R+G D++K + LGA + P + A + V + + Sbjct: 258 ---VRGRMTIIADGGVRSGSDVIKLLALGADAVLVGRPLITGAFGGGKEGVSFVLNKYTQ 314 Query: 311 EFIVSMFLLGTKRVQELYLNTALIRHQ 337 E I +M L G V+ + ++ H+ Sbjct: 315 ELIQAMLLTGVPDVE--KVCPRILDHR 339 >gi|126304353|ref|XP_001382129.1| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Monodelphis domestica] Length = 374 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 119/363 (32%), Gaps = 80/363 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + +VD + LG+K+S P+ ++S + + Sbjct: 31 ANDQETLADNIAAFSRWKLYPRIL--RNVAKVDLTTSVLGQKISMPICVASTA---MQRL 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A M + + E+ Q AP + L + + Sbjct: 86 AHVDGELATVRACHSMGTGMMLSTWATSSIE--------EVAQAAPDSTRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHL-------------NPLQ---------------EIIQ 161 + Q +A G G+FL + N Q Sbjct: 137 REISEQLVKRA-ERNGYKGIFLTVDTPYLGNRFDDVRNRFQLPPHLRMKNFQGFDLAFSS 195 Query: 162 PNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 G + + L I L +P++ K + L + D +K G+ Sbjct: 196 KEGYGDNSGLAQYVANMIDSSINWEDITWLKKLTTLPVVAKGI---LRADDARTAVKYGV 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + D+ +I + + GG+R Sbjct: 253 DGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGGIR 295 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D+LK++ LGA L P A V +E +++EF ++M L G + V+++ Sbjct: 296 KGTDVLKALALGAKAVFLGRPIIWGLAYQGEKGVKQVLEMMKEEFQLAMALTGCRNVKDI 355 Query: 328 YLN 330 Sbjct: 356 DKT 358 >gi|218200018|gb|EEC82445.1| hypothetical protein OsI_26871 [Oryza sativa Indica Group] Length = 363 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 113/352 (32%), Gaps = 55/352 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + ++D S LG + P++++ TGG+ Sbjct: 32 AEDEHTLRENIAAYTRIILRPRVL--VDVSKIDMSTTLLGYTMRSPIIVAP-TGGHKLAH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 + A AA A+ V S + S ++ R + V + Sbjct: 89 PEGEKATARAAASCN-AIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRA 147 Query: 122 N---LGAVQLNYD---FGVQKAHQAVHVLGADGLFL----------HLNPLQEIIQPNGN 165 A+ L D G ++A ++ L N Q Sbjct: 148 ESCGFKALLLTVDTPMLGRREADIRNKMVFPRSGNLEGLMTIDDHDTTNGSQLERFARAT 207 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I L S +P+ LK + +++ D +++G+ ++ G Sbjct: 208 LDPSLSWKDIEWLKSITSMPIFLKGI---VTAEDARRAVEAGVAGVIVSNHGARQLDYAP 264 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + T +LE R + GG+R G D+ K++ LGA Sbjct: 265 A------------------TIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAV 306 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 F A IE L E V+M L G + V E+ + + Sbjct: 307 --MPVFFGLAARGEAGARHVIEMLNGELEVAMALCGCRSVGEITRSHVMTEG 356 >gi|254579104|ref|XP_002495538.1| ZYRO0B13728p [Zygosaccharomyces rouxii] gi|238938428|emb|CAR26605.1| ZYRO0B13728p [Zygosaccharomyces rouxii] Length = 598 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 121/350 (34%), Gaps = 55/350 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT----GGN 68 + + N + + L ++ EVD E LG + P +++ G Sbjct: 221 ADDEITMRENHFAYHRIFFKPKVL--VNVAEVDTKTEMLGAPVDVPFYVTATALCKLGNP 278 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGS-QRVMFSD------HNAIKSFELRQYAPHTVLIS 121 + + I R + + KV V + + + I+ F+L +V+ Sbjct: 279 AEGEKDIARGCG--SGEKKVPQMVSTLASCSLEEVVNAGKEDQIRWFQLYMNEDRSVVDQ 336 Query: 122 NLGAVQL-----------NYDFGVQKAHQAVH-VLGADGLFLHLNPLQEIIQPNGNT--- 166 + + + G ++ V A L + ++ + NG + Sbjct: 337 MISSAEKLGYKGIFVTVDAPGLGNREKDTKVKFSSQAGPLSVKKKEKEDKGKDNGESSGA 396 Query: 167 --------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + +P+++K V D+ + G ++ GG Sbjct: 397 SKYLSKFIDPSFDWDDLVEVKKKTKLPIVIKGVQR---VEDVVKAAEVGASGVVLSNHGG 453 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 S ++ ++ + ++ GG+R G D++K++ Sbjct: 454 RQLDFSRSPIEVLAEAQPILKE-------------RNFENFDVFVDGGIRRGTDVVKALC 500 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA GL PFL ++ + V AI+ L E ++M LLG +++L Sbjct: 501 LGAKGVGLGRPFLYANSVYGKEGVQKAIDILNFEVEMTMRLLGVTSIKQL 550 >gi|317038795|ref|XP_001402214.2| cytochrome b2 [Aspergillus niger CBS 513.88] Length = 494 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 117/340 (34%), Gaps = 61/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN- 78 D NK FD L R L + VD + LG PL +S M + I+ + Sbjct: 145 DANKLCFDRIWLRPRVL--RNVRSVDTKTKLLGIDTELPLFVSPAA-----MAKLIHADG 197 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDH--NAIKS-------FELRQYAPHTVLI------ 120 +A A + V + D +A S + R A L+ Sbjct: 198 ELAIARACGNKGIFQGVSNNSSYPLDDLRSAAPSVNMFFQLYVNRDRAKSAALLRQCSAN 257 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL----- 171 N+ A+ + D +A + AD L + + P + G A Sbjct: 258 PNVKAIFVTVDAAWPGKREADERVKADETLSVPMAPSKAKNDKKGGGLGRVMAGFIDPGL 317 Query: 172 -SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 318 TWEDMVWVRQHTHLPVCLKGV---MSADDAILAMEAGLDGILLSNHGGRNLDTSP----- 369 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ ++L C E + G+R G DILK++ LGA+ G+ Sbjct: 370 -------------PSIVTLLELHKRCPEIFNRMEVYVDSGIRRGTDILKAVCLGATAVGM 416 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + V I+ +R E +M +G + E Sbjct: 417 GRSMLFATNYGQEGVEHLIDIMRDELETAMRNVGITSLDE 456 >gi|58266812|ref|XP_570562.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110826|ref|XP_775877.1| hypothetical protein CNBD2850 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258543|gb|EAL21230.1| hypothetical protein CNBD2850 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226795|gb|AAW43255.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 552 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 127/345 (36%), Gaps = 54/345 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+K FD + R L + + EF+G K + P+ IS K+ Sbjct: 211 ADREKTAAENEKAFDRYFFRPRILRDATTG--STETEFMGMKTTMPVFISPAA--MAKLG 266 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSD----------HNAIKSFELRQYAPHTVLIS 121 + NL A + + D + + + A L+ Sbjct: 267 NPLGEVNLTRGAGACGIVQGISINASCSLDEIMTARKEGQPVMFQIYLNKDRAASIALLK 326 Query: 122 NLGAVQLN-YDFGVQKAHQAVHVLGADGLFLHLNPL------QEIIQPNG---------N 165 + A+ N F V A ++ + H+ P Q+ P G + Sbjct: 327 RVTALGANAIIFTVDTAWRSKRTMDVRAKA-HVAPPPSSSGQQKSASPLGVSQAISGYQD 385 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 TN I + ++P+++K V C D++L K+G++ ++ GG Sbjct: 386 TNLTW--KDIDFIREHTNLPIIVKGVQC---VEDVDLCAKAGVQGVILSNHGGRQCDYAP 440 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLG 284 + DL + L RP ++ + + GG+R+G D++K+I LGA Sbjct: 441 APIDLLYE---------------LRCKRPDLFDKIEVMMDGGVRSGADVVKAIALGAKAV 485 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+ FL + VV + L +E +M +G R+++L Sbjct: 486 GIGRSFLYANGTHGEEGVVRLCQILAEEITNTMRNIGAPRLEDLK 530 >gi|168235739|ref|ZP_02660797.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734550|ref|YP_002114644.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710052|gb|ACF89273.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291039|gb|EDY30392.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 400 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 119/366 (32%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ + I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKQVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 ALIRHQ 337 L + Sbjct: 392 LLTEKE 397 >gi|168033163|ref|XP_001769086.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679720|gb|EDQ66164.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 122/353 (34%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F+ R L I +VD S LG +S P++++ + + Sbjct: 32 AEDQWTLKENRSAFERIRFRPRIL--IDVTKVDLSTNVLGFNISMPIMVAPTA---MQRM 86 Query: 73 ERINRNLAIA---AEKTKVA----MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ 119 LA A A+ + A S + S I+ F+L Y V+ Sbjct: 87 AHPEGELATARAVAKAGTIMTLSSWATSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRR 146 Query: 120 --ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL------------------NPLQEI 159 + A+ L D + + + L HL + L Sbjct: 147 AERAGFKAIALTVDTP-RLGRREADIKNKFVLPSHLTLANFEGLDLGKMDKTADSGLASY 205 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + L + +P+L+K V +++ D EL ++ G ++ G Sbjct: 206 VAGQIDRSLTW--KDVKWLQTITSLPILVKGV---ITAEDTELAVQHGAAGIIVSNHGAR 260 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSII 278 + + T +LE + GG+R G D+LK++ Sbjct: 261 QLDYVSA------------------TISALEEVVQAARGRLPVFLDGGVRRGTDVLKALA 302 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 LGAS + P + A D V ++ LR EF ++M L G +V ++ Sbjct: 303 LGASGVFIGRPVVFGLATDGQKGVENVLQMLRSEFELAMALAGCTKVSDIKRC 355 >gi|194444997|ref|YP_002040866.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197264108|ref|ZP_03164182.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194403660|gb|ACF63882.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197242363|gb|EDY24983.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 400 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 118/366 (32%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 ALIRHQ 337 L + Sbjct: 392 LLTEKE 397 >gi|21537253|gb|AAM61594.1| glycolate oxidase, putative [Arabidopsis thaliana] Length = 363 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 108/356 (30%), Gaps = 59/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N + F R L + +D S LG +S P++I+ + Sbjct: 30 AEDQHTLNENVQAFRRIMFRPRVL--VDVSNIDMSTSILGYPISAPIMIAPTA------M 81 Query: 73 ERINRNLAIAAEKT------KVAMAVGSQRVMFSDHN---------AIKSFELRQYAPHT 117 ++ A + + + I ++ R Sbjct: 82 HKLAHPKGEIATAKAAAACNTIMIVPFMSTCTIEEVASSCNAVRFLQIYVYKRRDVTAQI 141 Query: 118 VLIS-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------- 167 V + G + V + + + + L + ++ N Sbjct: 142 VKRAEKAGFKAIVLTVDVPRLGRREADIKNKMISPQLKNFEGLVSTEVRPNEGSGVEAFA 201 Query: 168 -----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + I L S +P+L+K + L+ D +++G+ ++ G Sbjct: 202 SSAFDASLSWKDIEWLRSITKLPILVKGL---LTREDALKAVEAGVDGIVVSNHGARQLD 258 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + ++ + GG+R G D+ K++ LGA Sbjct: 259 YSPATITVLEEV-----------------VHVVKGRIPVLLDGGVRRGTDVFKALALGAQ 301 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + A D V I+ L+ EF ++M L G + ++ N ++ Sbjct: 302 AVLIGRPIVYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDVTRNHVRTENE 357 >gi|73991331|ref|XP_542897.2| PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 1 [Canis familiaris] Length = 370 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 118/358 (32%), Gaps = 80/358 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + E+D S LG+++S P+ + + + + Sbjct: 31 ANDQETLADNIAAFSRWKLYPRML--RNVAEIDLSTSVLGQRVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 ++ LA A M + S + E+ + +P + L + + Sbjct: 86 AHVDGELATVRACRSLGTGMMLSSWSTSSIE-------EVAEASPDALRWLQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQPNGNTNF----- 168 + Q +A G +FL ++ P Q + N TN Sbjct: 138 EVTKQLVQRA-ERKGYKAIFLTVDTPYLGNRFDDVRNRFKLPPQ-LRMKNFETNDLAFSP 195 Query: 169 -------ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + L I L +P++ K + G D + +K G+ Sbjct: 196 KENFGDNSGLATYVAKSIDPSISWEDIKWLRGLTSLPIVAKGILRG---DDAKEAVKHGL 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + D +I + + GG+R Sbjct: 253 NGILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEIFLDGGVR 295 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 296 KGTDVLKALALGAKAVFVGRPVIWGLASQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|297834264|ref|XP_002885014.1| hypothetical protein ARALYDRAFT_478828 [Arabidopsis lyrata subsp. lyrata] gi|297330854|gb|EFH61273.1| hypothetical protein ARALYDRAFT_478828 [Arabidopsis lyrata subsp. lyrata] Length = 363 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 108/357 (30%), Gaps = 61/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F L R L + ++D S LG +S P++I+ + Sbjct: 30 AEDQHTLKENVLAFRRIMLRPRVL--VDVSKIDMSTTILGYPVSSPIMIAPTA------L 81 Query: 73 ERINRNLAIA-----AEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISN 122 ++ A M V S + S F + + Sbjct: 82 HKLAHPEGEIATAKAAAACNTIMIV-SFMSTCTIEEVASSCNAVRFLQIYVYKRRDVTAQ 140 Query: 123 L-------GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-FADL--- 171 + G + V + + + + L + ++ N + L Sbjct: 141 IVKKAEKAGFKAIVLTVDVPRLGRREADIKNKMISPQLKNFEGLVSTEVRPNEGSGLEAF 200 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 I L S +P+L+K + L+ D +++G+ ++ G Sbjct: 201 ASNALDASLSWKDIEWLRSITKLPILVKGL---LTREDALKAVETGVDGIVVSNHGARQL 257 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + ++ + GG+R G D+ K++ LGA Sbjct: 258 DYSPATITVLEEV-----------------VHVVRGRIPVLLDGGVRRGTDVFKALALGA 300 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + A D V IE L+ E ++M L G + ++ N ++ Sbjct: 301 QAVLIGRPIVYGLAAKGEDGVKKVIEMLKNELEITMALSGCPTIDDITRNHVRTENE 357 >gi|322614870|gb|EFY11795.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619311|gb|EFY16191.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623123|gb|EFY19965.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628413|gb|EFY25201.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634819|gb|EFY31550.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638615|gb|EFY35310.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640996|gb|EFY37643.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645421|gb|EFY41949.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651693|gb|EFY48065.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654404|gb|EFY50726.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661246|gb|EFY57472.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665020|gb|EFY61208.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667764|gb|EFY63924.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671824|gb|EFY67945.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677130|gb|EFY73194.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680206|gb|EFY76245.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685364|gb|EFY81360.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194749|gb|EFZ79938.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199533|gb|EFZ84625.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204400|gb|EFZ89408.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205823|gb|EFZ90786.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213878|gb|EFZ98653.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323219086|gb|EGA03590.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323232012|gb|EGA16119.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234539|gb|EGA18626.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237991|gb|EGA22050.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243407|gb|EGA27426.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246430|gb|EGA30412.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253715|gb|EGA37542.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257704|gb|EGA41388.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260805|gb|EGA44409.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266528|gb|EGA50015.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271252|gb|EGA54679.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 400 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 118/366 (32%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 ALIRHQ 337 L + Sbjct: 392 LLTEKE 397 >gi|225560517|gb|EEH08798.1| cytochrome b2 [Ajellomyces capsulatus G186AR] Length = 511 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 124/353 (35%), Gaps = 64/353 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD L R L + E + + LG ++ PL +S M++ I + Sbjct: 148 DANKSFFDRTWLRPRVL--RNVKEANTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 78 NLA--IAAEKTKVAMAVG-SQRVMFSDHNAIKS--------FELRQYAPHTVLI------ 120 LA A E + + S D A + + A + Sbjct: 201 ELAVARACETRGIMQGISNSASYPMKDITAAGPRANYFFQLYVNKDRAKSAAQLRECSEN 260 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL------NPLQEIIQPNGNTNFAD--- 170 + A+ + D +A + AD L + + N + F D Sbjct: 261 PRIRAIFITVDAAWPGKREADERVRADESLSVPMSAQRAQNDSKGGGLGRVMGGFIDPAL 320 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 321 TWEDLVWARKHTHLPLVLKGV---MSADDAILAMKAGLDGILLSNHGGRNLDTSP----- 372 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P ++L C E + GG+R G DILK++ LGA+ G+ Sbjct: 373 -------------PALVTLLELHKRCPEIFDKMEIYVDGGIRRGTDILKAVCLGATAVGM 419 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L A + V + + E +M L+G + + + +NTA I H Sbjct: 420 GRSVLFAAAYGQEGVEHLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|204927658|ref|ZP_03218859.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323000|gb|EDZ08196.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 399 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 118/366 (32%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 ALIRHQ 337 L + Sbjct: 392 LLTEKE 397 >gi|218133502|ref|ZP_03462306.1| hypothetical protein BACPEC_01369 [Bacteroides pectinophilus ATCC 43243] gi|217990877|gb|EEC56883.1| hypothetical protein BACPEC_01369 [Bacteroides pectinophilus ATCC 43243] Length = 337 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 115/325 (35%), Gaps = 52/325 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + + L + +S VD S+ GK+ +P + N + + Sbjct: 47 RNYDKWKEIRLNMDTI--VSNRPVDTSISLFGKEFKYPFFAGPVGAVNLHYGDSLDDVAY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A +A G ++ + + A + + + + + Sbjct: 105 NDILVSACADAGIAAFTGDG----TNP------GVMEAATDAIKNAKGRGIPTVKPWNID 154 Query: 136 KAH---QAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + V GA + + ++ L+ + P G+ + +++ + A + P + Sbjct: 155 TIRDKMELVRNSGAFAVAMDIDAAGLPFLKNMTPPAGSKS----VEELSEIVKAANAPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +K + ++ ++G ++ GG + + T Sbjct: 211 VKGI---MTVKGALKAKEAGASAIVVSNHGGRVLDQCPA------------------TAE 249 Query: 248 SLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAI 305 LE + + GG+R+G D+LK+I LGA +A PF+ + V+A I Sbjct: 250 VLEEIVKAVDGSMKIFVDGGIRSGADVLKAIALGADAVIIARPFVTAVYGGEHEGVLAYI 309 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLN 330 + + E +M + G + E+ + Sbjct: 310 DKIGSELKDAMAMCGAASISEITRD 334 >gi|213647841|ref|ZP_03377894.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 400 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLSFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|319997180|gb|ADV91184.1| mitochondrial cytochrome b2-like protein 2 [Karlodinium micrum] Length = 374 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 126/350 (36%), Gaps = 48/350 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 + N F L R + + ++ LG + +FP+ IS +M G ++ Sbjct: 29 ANDEVTKRDNCAAFSRAWLKPRVM--RNVLSINTRCTLLGTEFAFPIFISPAAMAGLAHE 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-------------------MFSDHNAIKSFELR 111 E LA AA K V + ++ + K+ + Sbjct: 87 DAEP---ALARAAGKLGALHVVANMASRELEEITDARVPGQTQWYQIYVNPERSKTEAII 143 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH-----LNPLQEIIQPNGNT 166 + A + + L V G ++ V+ + L L N + Q G+ Sbjct: 144 KRAVQAGVKALLVTVD-TPQLGRRERDMRNKVIDSSNLSLVQKDGITNTSAGVAQALGDI 202 Query: 167 NFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A L +A + D+P++LK V G D L + G ++ GG Sbjct: 203 SDARLNWDDLAWIRKITDLPIILKGVQSG---EDAVLAAQHGCAGVLVSNHGGRQLDHAR 259 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 D+ ++ ++ ++ + GG+R G D+ K++ LGA G Sbjct: 260 PTFDILVEVMQDLEE------------ADLKDKIEVYLDGGVRRGTDVYKALALGAKAVG 307 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + P + D V ++ +R EF+++M L+G + ++ +++ Sbjct: 308 IGRPCMYALTFGQDGVEKCLQLIRDEFMLTMKLMGVTSIDQIRKKDIVLK 357 >gi|168002982|ref|XP_001754192.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694746|gb|EDQ81093.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 126/353 (35%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F+ R L I +VD + LG +S P++++ + + Sbjct: 32 AEDQWTLRENRNAFERIRFRPRIL--IDVTKVDLTTNVLGFNISMPIMVAPTA---MQRM 86 Query: 73 ERINRNLAIA---AEKTKVA----MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ 119 + LA A ++ + A S + S I+ F+L Y V+ Sbjct: 87 AHPDGELATARAVSKAGTIMTLSSWATSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRR 146 Query: 120 --ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------NPLQE-----I 159 + A+ L D + + + L HL + Q+ Sbjct: 147 AERAGFKAIALTVDTP-RLGRRESDIKNRFALPSHLTLANFEGLDLGKMDKTQDSGLASY 205 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + + L + +P+L+K V +++ D +L ++SG ++ G Sbjct: 206 VAGQIDRSLSW--KDVKWLQTITKLPILVKGV---ITAEDTQLAIQSGAAGIIVSNHGAR 260 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSII 278 + + T +LE GG+R G D+LK++ Sbjct: 261 QLDYVSA------------------TISALEEVVLAARGRVPVFLDGGVRRGTDVLKALA 302 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 LGAS + P + A D V ++ LR EF ++M L G +V ++ + Sbjct: 303 LGASGVFVGRPVVFGLATDGQKGVEKVLQMLRDEFELAMALAGCTKVSDIKRS 355 >gi|261289813|ref|XP_002611768.1| hypothetical protein BRAFLDRAFT_236342 [Branchiostoma floridae] gi|229297140|gb|EEN67778.1| hypothetical protein BRAFLDRAFT_236342 [Branchiostoma floridae] Length = 358 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 129/346 (37%), Gaps = 55/346 (15%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N + F + R L + S D S LG+K+ FP+ +SS + + + Sbjct: 31 QTLKENTEAFKRLRIRPRFLRDASCR--DLSTTLLGEKVDFPVGVSSTA---LQGLAWPD 85 Query: 77 RNL--AIAAEKTKVAMAVGSQ-RVMFSD-----HNAIKSFEL-----RQYAPHTVLISNL 123 ++ A AA K M V + D +K F+L RQ+ V + Sbjct: 86 GDICTAKAATKLHTCMIVSTYANNSIEDISTASPGGLKWFQLYIMPDRQFTQRLVQRAET 145 Query: 124 ---GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFAD-------- 170 A+ + D V + + + L H++ LQ + ++ Sbjct: 146 AGYKALVVTVDLPV-VGKRYPDLRNSFQLPPHISVPNLQGLESSASQRDYGSGASPEDPA 204 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHR 228 I LSS ++P++LK + L++ D + L G++ ++ GG + + Sbjct: 205 LSWKDIDWLSSITNLPIILKGI---LTAEDAGIALDHPGVKGILVSNHGGRQLDGVTATI 261 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ +I + GG+R G D+LK++ LGA + Sbjct: 262 EVLPEI-----------------VAAVGQRLEVYLDGGVRTGTDVLKALALGARAVFVGR 304 Query: 289 P-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 P A + D V + LR E ++M L G + + E+ + + Sbjct: 305 PAIWGLAYNGEDGVAEVMTILRSELDLAMALSGCRSLAEIKHSLVV 350 >gi|134074829|emb|CAK38943.1| unnamed protein product [Aspergillus niger] Length = 507 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 117/340 (34%), Gaps = 61/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN- 78 D NK FD L R L + VD + LG PL +S M + I+ + Sbjct: 145 DANKLCFDRIWLRPRVL--RNVRSVDTKTKLLGIDTELPLFVSPAA-----MAKLIHADG 197 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDH--NAIKS-------FELRQYAPHTVLI------ 120 +A A + V + D +A S + R A L+ Sbjct: 198 ELAIARACGNKGIFQGVSNNSSYPLDDLRSAAPSVNMFFQLYVNRDRAKSAALLRQCSAN 257 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL----- 171 N+ A+ + D +A + AD L + + P + G A Sbjct: 258 PNVKAIFVTVDAAWPGKREADERVKADETLSVPMAPSKAKNDKKGGGLGRVMAGFIDPGL 317 Query: 172 -SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + +P+ LK V +S+ D L +++G+ ++ GG + Sbjct: 318 TWEDMVWVRQHTHLPVCLKGV---MSADDAILAMEAGLDGILLSNHGGRNLDTSP----- 369 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ ++L C E + G+R G DILK++ LGA+ G+ Sbjct: 370 -------------PSIVTLLELHKRCPEIFNRMEVYVDSGIRRGTDILKAVCLGATAVGM 416 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + V I+ +R E +M +G + E Sbjct: 417 GRSMLFATNYGQEGVEHLIDIMRDELETAMRNVGITSLDE 456 >gi|225442052|ref|XP_002270074.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742966|emb|CBI35833.3| unnamed protein product [Vitis vinifera] Length = 364 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 113/360 (31%), Gaps = 77/360 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F R L + ++D S LG K+S P++I+ + + + Sbjct: 31 AEDQHTLRENVEAFSRITFQPRIL--VDVSKIDMSTTILGYKISSPIMIAP---TSLQKL 85 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA M + S + S + V L V Sbjct: 86 AHPEGEIATARAAAACNTIMVL-SFMATCTVEEVASS-------CNAVRFLQL-YVFKRR 136 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADLS-------- 172 D Q +A G + L ++ ++ P NF L Sbjct: 137 DISAQVVQKA-ERYGFKAIVLTVDTPRLGRREADIKNRMVSPQ-LKNFEGLLTTDVSNDK 194 Query: 173 ------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I L S ++P+L+K V L+ D ++ G+ ++ Sbjct: 195 GSSLEALASEIYDASLSWKDIEWLRSITNLPILIKGV---LTCEDAIKAVEVGVSGIIVS 251 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDI 273 G + + T +LE R + GG+R G D+ Sbjct: 252 NHGARQLDYVPA------------------TISALEEVVRAVGGRVPVLLDGGIRRGTDV 293 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ LGA + P + A V +E L+ E ++M L G V+++ Sbjct: 294 FKALALGAQAVLVGRPVIYGLAAKGEHGVRRVLEMLKDELEITMALSGCSSVKDISRRHV 353 >gi|168462934|ref|ZP_02696865.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634537|gb|EDX52889.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 400 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|16760260|ref|NP_455877.1| glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141973|ref|NP_805315.1| glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163317|ref|ZP_03349027.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417533|ref|ZP_03350675.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426266|ref|ZP_03359016.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583849|ref|ZP_03365675.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213611275|ref|ZP_03370101.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213857381|ref|ZP_03384352.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825672|ref|ZP_06544843.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25284060|pir||AH0666 probable glycolate oxidase STY1444 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502555|emb|CAD01705.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137602|gb|AAO69164.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 400 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLSFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|238911856|ref|ZP_04655693.1| putative oxidase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 400 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|194704500|gb|ACF86334.1| unknown [Zea mays] Length = 368 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 116/362 (32%), Gaps = 75/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + NK+ F R L I +D S LG K+S P++++ + Sbjct: 30 AEDQWTLKENKEAFSKILFRPRVL--IDVSHIDMSTSILGYKISMPIMVAPTA------L 81 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 ++ A A A + S ++ E+ AP + L V + D Sbjct: 82 HKLAHQEGEVASAQ--AAAAAGTIMTLSSWSSCSIEEVSSIAP-GLRFFQLS-VFKDRDI 137 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNG--NTNFADL--------- 171 Q +A G + + ++ P F L Sbjct: 138 VQQLVRRA-ENAGYKAIAVTVDAPRLGRREADVRNRFRLPENVVLKCFEGLDLSKMDKTK 196 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I L + +P+L+K V +++ D + ++ G+ ++ Sbjct: 197 GSGLAAYATSQIDSSLSWKDIKWLQTITGLPILVKGV---ITAEDARIAIECGVAGIIVS 253 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVD 272 GG + + T LE GG+R G D Sbjct: 254 NHGGRQLDYLPA------------------TISCLEEVVREAKGRRVPVFLDGGIRRGTD 295 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGAS + P L A+D V A+ LR E ++M L G ++++ + Sbjct: 296 VFKALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCASLKDITRDR 355 Query: 332 AL 333 + Sbjct: 356 VI 357 >gi|168241170|ref|ZP_02666102.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448043|ref|YP_002045659.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194406347|gb|ACF66566.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339332|gb|EDZ26096.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 400 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|56413437|ref|YP_150512.1| glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362360|ref|YP_002141997.1| glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127694|gb|AAV77200.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093837|emb|CAR59320.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 400 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|320587589|gb|EFX00064.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 497 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 122/354 (34%), Gaps = 68/354 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+ F + R L F+G + P+ IS K+ Sbjct: 145 ADEETTFHENRDAFRRYFFRPRML--RDLTNGSAETTFVGIPTALPIFISPAA--MAKLG 200 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + N+ AA + + ++ + + + F R+ + LI V LN D Sbjct: 201 HPLGEVNMTRAAAECGIVQSISANAS----CSLEEMFAAREDSQ--PLIYQ---VYLNKD 251 Query: 132 FGV-QKAHQAVHVLGADGLFLHLNPL----------------------------QEIIQP 162 + + V +GA + ++ E ++P Sbjct: 252 RTQSESILRKVERMGAKAVMFTVDTAGDSKRTLDERLKVAAAAKLREDNGKTTKSEPLEP 311 Query: 163 -NGNTNFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + I + +P+++K + S D++L + G+ ++ Sbjct: 312 LAIGHAISGYQDRNLTWKDIGFIRKNTKLPIIVKGIQ---SVEDVQLCVDHGVEGVILSN 368 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + D+ +I ++ D ++ + GG+R G D++K Sbjct: 369 HGGRQADYAPAPIDVLYEIRVLRPD--------------LFDKIDIMIDGGVRTGADVVK 414 Query: 276 SIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 ++ LGA GL PFL + V IE L +E + +M +G +++L Sbjct: 415 AVALGAKAVGLGRPFLYANGTHGQEGVRRVIEILHEEIVNTMRNIGAATIKDLK 468 >gi|321257347|ref|XP_003193558.1| FMN-dependent dehydrogenase family protein [Cryptococcus gattii WM276] gi|317460028|gb|ADV21771.1| (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase), putative [Cryptococcus gattii WM276] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 115/361 (31%), Gaps = 71/361 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N + F+ + + R L + +D SVE G+K++ PL S + + Sbjct: 36 AMDMITCRENVEAFNQYRIRPRIL--VDVGNIDMSVEIFGQKVAAPLGFSPTA---FQRL 90 Query: 73 ERINRNLAI--AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + +A AA K + M + + + + P+ + +S V + Sbjct: 91 AHPDGEIATSMAASKAGIPMCLSTYSTTSIEDVVTAG---QGAIPYVMQLS----VMKSR 143 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP------LQEII-------------QPNGNTNFAD- 170 + ++ +A G +F+ ++ L E P ++ + Sbjct: 144 EANLEIIRRA-EKAGCKAVFVTVDCAVLGRRLNEARNNFTLPDHIELPHMPADC-DWRNL 201 Query: 171 --------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + S + + LK V ++ D+ L ++ GI ++ Sbjct: 202 VVEDDRLKYDASCTWKTLVDWARSHTKMQIWLKGV---YTAEDVILAIEYGIDGVVVSNH 258 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + + D ++ G+R G DI K+ Sbjct: 259 GGRQLDSVTATLDALPEV-----------------VEAAAGRIPVHIDSGIRRGTDIFKA 301 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGA L A D V AI L E +M L G ++++ R Sbjct: 302 LALGADHVWLGRAVIWGLAHDGEAGVSLAINLLLDELRTTMTLAGCANIKQITKAHLARR 361 Query: 336 H 336 Sbjct: 362 G 362 >gi|16764964|ref|NP_460579.1| oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992791|ref|ZP_02573887.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420145|gb|AAL20538.1| putative oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328998|gb|EDZ15762.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246813|emb|CBG24627.1| putative L-lactate oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993545|gb|ACY88430.1| putative oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158148|emb|CBW17645.1| putative L-lactate oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912608|dbj|BAJ36582.1| putative oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224243|gb|EFX49306.1| Lactate 2-monooxygenase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|332988507|gb|AEF07490.1| putative oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 400 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 IFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|58266126|ref|XP_570219.1| hypothetical protein CND02080 [Cryptococcus neoformans var. neoformans JEC21] gi|134111114|ref|XP_775699.1| hypothetical protein CNBD4280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258363|gb|EAL21052.1| hypothetical protein CNBD4280 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226452|gb|AAW42912.1| hypothetical protein CND02080 [Cryptococcus neoformans var. neoformans JEC21] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 114/357 (31%), Gaps = 71/357 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N + F+ + + R L + +D SVE G+K++ PL S + + Sbjct: 36 AMDMITCRENVEAFNQYRIRPRIL--VDVGNIDMSVEVFGQKVAAPLGFSPTA---FQKL 90 Query: 73 ERINRNLAI--AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + +A AA K + M + + + + P+ + +S V + Sbjct: 91 AHPDGEIATSMAASKAGIPMCLSTYSTTSIEDVVTAG---QGAIPYVMQLS----VMKSR 143 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP------LQEII-------------QPNGNTNFAD- 170 D ++ +A G LF+ ++ L E P ++ + Sbjct: 144 DANLEIIRRA-EKAGCKALFVTVDCAVLGRRLNEARNNFTLPDHIELPHMPADC-DWRNL 201 Query: 171 --------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + S + + LK V ++ D+ L ++ GI ++ Sbjct: 202 VVEDDRLKYDASCTWKTLVDWARSHTKMQIWLKGV---YTAEDVALAIEYGIDGVVVSNH 258 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + + D ++ G+R G DI K+ Sbjct: 259 GGRQLDSVTATLDALPEV-----------------VEAAAGRIPVHIDSGIRRGTDIFKA 301 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + LGA + A D V A+ L E +M L G V+++ Sbjct: 302 LALGADHVWIGRAVIWGLAHDGEAGVSLAVNLLLDELRTTMVLAGCANVKQITRAHL 358 >gi|323129889|gb|ADX17319.1| putative oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 401 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 65 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 118 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 119 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 177 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 178 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 232 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 233 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 289 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 290 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 332 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 333 IFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 392 Query: 332 AL 333 L Sbjct: 393 LL 394 >gi|291228833|ref|XP_002734382.1| PREDICTED: hydroxyacid oxidase 2-like [Saccoglossus kowalevskii] Length = 366 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 124/346 (35%), Gaps = 57/346 (16%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---------- 65 + + N++ F L R L ++S D LG+++ P+ IS Sbjct: 36 ETTLKENRRSFRRIRLKPRVLRDVSTR--DLKTTILGREIDIPICISPTAFQGLAHPDAE 93 Query: 66 GGNNKMIERINR-----------NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G ++ N I + ++ N + ++ Q A Sbjct: 94 AGTSRASGTFNTCMILSSVSSLSLEDICCAHSG----GTKWMDIYVWPNPRVTKDMVQRA 149 Query: 115 PHTVLISNLGAVQL-NYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNG-------N 165 + +V + F + A+ A ++ + + + + + I Sbjct: 150 EQAGCKGIVVSVDICQVGFKRRMAYVAGDIVPRNAIIANFDKYCKNGIMNETTFLDEVKC 209 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + + I + S +P++LK + ++ D + ++ + ++ GG + Sbjct: 210 GDPSATWADIDWIKSITKLPIILKGI---MTVEDALIAVEHKVNAIMVSNHGGRQLDGVP 266 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D+ ++I + ++ + GG+R G D+LK++ LGA Sbjct: 267 ATIDVLAEIS-----------------KAVGDKIEVYMDGGVRTGTDVLKALALGARAVF 309 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A + V ++ L+ E ++M L G + ++++ + Sbjct: 310 IGRPVIYGLAYKGEEGVKNVLQILKDELSLAMALSGCRTIKDINES 355 >gi|317034116|ref|XP_001396061.2| (S)-2-hydroxy-acid oxidase [Aspergillus niger CBS 513.88] Length = 370 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 118/352 (33%), Gaps = 85/352 (24%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N+ ++ + L+ R L ++ +D S GKK+ FPL + ++ Sbjct: 44 LKDNEAAYNRYKLLPRVLRDVDV--LDTSTTIFGKKVKFPLGFAP------AAAHKLAHA 95 Query: 79 LAI-----AAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 AA + M + S D A + N A+Q+++ Sbjct: 96 DGEVGTSRAAAAHDIPMCLSSWATTGIDDVIAQGT-------------GNPYAMQVSFFK 142 Query: 133 GVQKAHQAV---HVLGADGLFLHLN------------------------PLQEIIQPNGN 165 V+ + + G LF+ ++ L E I G Sbjct: 143 DVEITRRIIQKAEKAGYKALFVSVDLPVLGNRLNESRNNFNFPSDMRFPVLAEGINEMGL 202 Query: 166 TNFAD--------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + IA L + + LK V S DI+L + I I+ G Sbjct: 203 KDSYERGYDGTIRWDKTIAWLRQNTKLEIWLKGV---YSPEDIQLAIDHKIDGVIISNHG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDILKS 276 G + + T +L + P + GG+R G D+ K+ Sbjct: 260 GRQLDGVPA------------------TLDALRICAPVAKGKIPLAVDGGIRRGADVFKA 301 Query: 277 IILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 I LGAS+ + P A + V A++ L EF +M L G + + ++ Sbjct: 302 IALGASMCFVGRIPIWGLAYNGEKGVDLAVKILYDEFCRTMKLAGCRTIADI 353 >gi|255949914|ref|XP_002565724.1| Pc22g18190 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592741|emb|CAP99107.1| Pc22g18190 [Penicillium chrysogenum Wisconsin 54-1255] Length = 494 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 114/340 (33%), Gaps = 61/340 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 + NK FD R L + VD LG PL +S M + I Sbjct: 145 NANKSCFDRIWFRPRVL--RNVRSVDAGTNILGGSYKLPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSD------HNAIKSFEL---RQYAPHTVLI----SN 122 +A A + + + + +A F+L R A L+ +N Sbjct: 198 ECAIARACANKGIMQGISNNSSYTMEELRTSAPSADFFFQLYVNRDRAKSAALLRQCSAN 257 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN---TNFADL----- 171 + A+ + D +A + AD L + + P + G A Sbjct: 258 PSIKAIFVTVDAAWPGKREADERVKADESLSVPMAPSKAQNDKKGGGLGRVMAGFIDPGL 317 Query: 172 -SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + P+ LK V +S+ D L +K+G+ ++ GG + Sbjct: 318 TWEDLKWVKQHTHKPVCLKGV---MSADDALLAMKAGLDGILLSNHGGRNLDTSP----- 369 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ ++L C E + G+R G DILK++ LGA+ G+ Sbjct: 370 -------------PSIITLLEIHRRCPEVFDHMEVYVDSGIRRGTDILKAVCLGATAVGM 416 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + V I+ ++ E +M +G + E Sbjct: 417 GRSMLFATNYGQEGVEHLIDIMQDELETAMRNIGITSLAE 456 >gi|242074366|ref|XP_002447119.1| hypothetical protein SORBIDRAFT_06g029000 [Sorghum bicolor] gi|241938302|gb|EES11447.1| hypothetical protein SORBIDRAFT_06g029000 [Sorghum bicolor] Length = 367 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 111/364 (30%), Gaps = 80/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + NK+ F R L I +D S LG K+S P++++ + Sbjct: 30 AEDQWTLKENKEAFSKILFRPRVL--IDVSRIDMSTSILGYKISMPIMVAPTA------L 81 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 ++ A + ++ S + + L QL+ Sbjct: 82 HKLAHREGEVASAQ-----ATAAAGTIMTLSSWSSCSIEEVNSSAP---GLRFFQLSVFK 133 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPL----------QEIIQPNG--NTNFADL------ 171 Q V G + + ++ P F L Sbjct: 134 DRDIVQQLVRRAENAGYKAIAVTVDAPRLGRREADVRNRFTLPENVVLKCFEGLDLSKID 193 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I L + +P+L+K V +++ D L ++ G+ Sbjct: 194 KTNALGLAAYVTSQIDSSLSWKDIKWLQTITRLPILVKGV---ITAEDARLAIECGVAGI 250 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNG 270 ++ GG + + T LE R G+R G Sbjct: 251 IMSNHGGRQLDYLPA------------------TISCLEEVVREAKGRVPVFLDSGIRRG 292 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+ K++ LGAS + P L A+D V A++ LR E ++M L G ++++ Sbjct: 293 TDVFKALALGASGVFIGRPVLFALAVDGKAGVRNALQMLRDELEITMALSGCTSLKDITR 352 Query: 330 NTAL 333 + + Sbjct: 353 DHVI 356 >gi|147789143|emb|CAN60338.1| hypothetical protein VITISV_031317 [Vitis vinifera] Length = 364 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 114/360 (31%), Gaps = 77/360 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F R L + ++D S LG K+S P++I+ + + + Sbjct: 31 AEDQHTLRENVEAFCRITFQPRIL--VDVSKIDMSTTILGYKISSPIMIAP---TSLQKL 85 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA M + S + S + V L V Sbjct: 86 AHPEGEIATARAAAACNTIMVL-SFMATCTVEEVASS-------CNAVRFLQL-YVFKRR 136 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADLS-------- 172 D Q +A G + L ++ ++ P NF L Sbjct: 137 DISAQVVQKA-ERYGFKAIVLTVDTPRLGRREADIKNRMVSPQ-LKNFEGLLTTDVSNDK 194 Query: 173 ------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I L S ++P+L+K V L+ D ++ G+ ++ Sbjct: 195 GSSLEALASEIYDASLSWKDIEWLRSITNLPILIKGV---LTCEDAIKAVEVGVSGIIVS 251 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDI 273 G + + T +LE R + GG+R G D+ Sbjct: 252 NHGARQLDYVPA------------------TISALEEVVRAVGGRVPVLLDGGIRRGTDV 293 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ LGA + P + A D V +E L+ E ++M L G V+++ Sbjct: 294 FKTLALGAQAVLVGRPVIYGLAAKGEDGVRRVLEMLKDELEITMALSGCSSVKDISRRHV 353 >gi|168260186|ref|ZP_02682159.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350619|gb|EDZ37250.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 400 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 118/366 (32%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTERFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 ALIRHQ 337 L + Sbjct: 392 LLTEKE 397 >gi|198244860|ref|YP_002215527.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939376|gb|ACH76709.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623273|gb|EGE29618.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 378 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 115/337 (34%), Gaps = 45/337 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFA--------DLSSKIALLSSA 181 Q GA + L ++ P+ + + NF ++ ++ S Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 182 MDVPLLLKEV----GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + E+ + D E+ +++G ++ GG S D+ I Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDAEIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLPAI--- 288 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MD 296 A+ I G+R G I K++ GA + + P L + Sbjct: 289 --------------AKVVNKRVPVIFDSGVRRGSHIFKALASGADIVAVGRPVLYGLNLG 334 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V + IE L KE ++M L G + ++++ L Sbjct: 335 GAQGVASVIEQLNKELTINMMLGGARNIEQVKTTRLL 371 >gi|62180186|ref|YP_216603.1| putative oxidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127819|gb|AAX65522.1| putative oxidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714660|gb|EFZ06231.1| putative oxidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 400 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FIFAQAVKH-----GAKAIVLTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 IFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|37528199|ref|NP_931544.1| hypothetical protein plu4371 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787636|emb|CAE16743.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 362 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 119/345 (34%), Gaps = 60/345 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-------- 66 + + N + FDD+ +I R L E D + E LG + P+ I + Sbjct: 44 DEWTLRENTRAFDDFQIIPRYLAG--VKEPDTTTELLGSNVDMPIFIPPIAAHGLAHTTA 101 Query: 67 --GNNKMIE----------RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G + N +L A+ + ++ + + EL + A Sbjct: 102 ELGTARGAASAGTLFTAQTLSNSSLEEIAKVSN----GPKWFQIYLTKDMGINRELIRRA 157 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-------LQEIIQ-PNGNT 166 + + V L + G ++A + + L P L EI + + Sbjct: 158 KAMGATAIVFTVDLEWS-GNREADKRNKFIFPHSLPFPNIPGAPVGATLSEITELFKRDL 216 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 NF+DL L+ +P+++K + S+ + + + G ++ GG + + Sbjct: 217 NFSDL----EFLAKESGLPIIVKGIQ---SAENAKECVNHGAAAIQVSNHGGRQLDTVPA 269 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 I ++ GG+R G + K++ LGA + Sbjct: 270 AIASLPHI-----------------VEAVGSKIPVYLDGGIRRGTHVFKALALGAKAVAI 312 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P L A+ + V + + L+ E +SM L G ++++ Sbjct: 313 GRPILYALALGGAPGVTSILNLLKDELKLSMKLAGCAAIKDIERK 357 >gi|224583887|ref|YP_002637685.1| glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468414|gb|ACN46244.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 401 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 65 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 118 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 119 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 177 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 178 FILAQAVKH-----GAKAIVLTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 232 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 233 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 289 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 290 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 332 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 333 IFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 392 Query: 332 AL 333 L Sbjct: 393 LL 394 >gi|145530101|ref|XP_001450828.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418461|emb|CAK83431.1| unnamed protein product [Paramecium tetraurelia] Length = 368 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 121/367 (32%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N F +L R L ++ + LG ++ P+ I+ + K+ Sbjct: 31 ANEEITKKENIDAFQRIYLNPRVL--RDVSKISTKTKILGHQIDLPIGIAPVA--MLKLA 86 Query: 73 ERINRNL-AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + + A A + KV + + + E+ ++ + L +Q N Sbjct: 87 HPLGEEVTAQLAHQWKVPFTLTTLSTLSQS-------EVAKHNKDGLRFQQL-YIQKNRQ 138 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP------------------------LQEI-------I 160 +A G GL L ++ L+E+ + Sbjct: 139 LTEALVRKA-EKEGFQGLVLTVDAPILGKREADEKQRFVLPPHLRLEILEELAKEANIQL 197 Query: 161 QPNGNTNFADLS-------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 Q N + L + I L S VP++LK + CG D +L L+ G Sbjct: 198 QTVANNQGSGLLKFFAEQLDQTVNWNDIKWLRSITKVPIILKGIQCG---ADAKLALEHG 254 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + ++ GG + T L + G+ Sbjct: 255 VDAIWVSNHGGRQLDTVR------------------STVEMLPEIVAAAGSVEVYVDSGV 296 Query: 268 RNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 RNG D+ K + LGA + P + A+ + + + L+ E + +M L+G +QE Sbjct: 297 RNGTDVYKCLALGAKCVFVGRPAIYSTAIGGREGLNKMFQILQSELVSTMQLMGVTSIQE 356 Query: 327 LYLNTAL 333 + + + Sbjct: 357 IKSDGIV 363 >gi|325263811|ref|ZP_08130544.1| dehydrogenase, FMN-dependent family [Clostridium sp. D5] gi|324030849|gb|EGB92131.1| dehydrogenase, FMN-dependent family [Clostridium sp. D5] Length = 338 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 106/299 (35%), Gaps = 48/299 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTG-----GNNKMIERINRNLAIAAEKTKVAMAVGS---QRV 97 +E G+K + P + G+ + N L A + +A G V Sbjct: 70 TELELFGRKFTSPFFAGPVGAVKLHYGDKYTDQEYNDILVSACAENGIAAFTGDGTDYNV 129 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-- 155 M AI F + + I + L +++ + V GA + + ++ Sbjct: 130 MIEATKAIGKF-------NGMGIPTVKPWDLG---TIREKMELVKKSGAFAVAMDIDAAG 179 Query: 156 ---LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 LQ + P G+ + ++ + ++P +LK + ++ ++G++ Sbjct: 180 LPFLQNLNPPAGSKS----VEELKEIVKMAEIPFILKGI---MTPKAALKAKEAGVQGIV 232 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + + ++ S I + GG+R G+D Sbjct: 233 VSNHGGRVLDQCPATAEVLSSI-----------------VEAVKGDMTIFVDGGIRTGID 275 Query: 273 ILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ LGA +A PF+ + V A + E +M + G + E+ + Sbjct: 276 VFKALALGADAVLIARPFVTAVYGGEAEGVKAYTNRINAELKDTMSMCGAFSLSEIQRD 334 >gi|308272310|emb|CBX28916.1| hypothetical protein N47_B20620 [uncultured Desulfobacterium sp.] Length = 152 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 4/144 (2%) Query: 6 KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 K HI + K + L ALP+ F E+D EFLGK LS PLLI+ +T Sbjct: 13 KSRHIKVCLKHDVQTTVSNGLEKVRLT-VALPDFLFSEMDLQCEFLGKTLSLPLLIAPLT 71 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 GG + RINRNLA AAE+ +AMAVGSQ++M + ++ S+ LR AP+ L++N+G Sbjct: 72 GGCG-LSRRINRNLAEAAERMGLAMAVGSQKLMLDNISSPDSYLLRDIAPNIPLLANVGL 130 Query: 126 VQLNYDFGVQKAHQAVHVLGADGL 149 V + G +AV + AD L Sbjct: 131 VHVKR--GKDYLLKAVESIEADEL 152 >gi|198418143|ref|XP_002119255.1| PREDICTED: similar to LOC100101335 protein [Ciona intestinalis] Length = 371 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 125/359 (34%), Gaps = 76/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L L +V+ LG + FP+ I+S + Sbjct: 30 ANNEQTLSDNCNAFSRYRLRPHVL--NDVSKVNLGSSVLGTPIDFPVCIASTA---MNKM 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +A+ +M +G + ++ + + AP + L + N + Sbjct: 85 AHPTGEIAVVKAAE--SMKIGYMQSTWATTSVED---ITAAAPGAIRWLQL-YIYKNREV 138 Query: 133 GVQKAHQAVHVLGADGLFLHLN-----------------------------PLQEIIQPN 163 Q +A LG G+FL ++ L+E+ + Sbjct: 139 TKQLVQRA-ERLGYQGIFLTVDTPILGKRYKDVKNNFSLPSHLSLENFKALDLKELHTVD 197 Query: 164 GNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 G N + L S IA L + +P++LK + ++ + +K + Sbjct: 198 GE-NGSGLAQMVAALIDPSLQWSDIAWLKTITSMPIVLKGI---ITGEMAKRAVKENVAG 253 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + + D +I + + + GG+RNG Sbjct: 254 ILVSNHGARQLDGVPATIDALREI-----------------VQAVDGKCEVYLDGGVRNG 296 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 D++K+I GA + P L A + + V ++ LR+EF ++ L+G ++EL Sbjct: 297 TDVIKAIAFGAKAVFIGRPVLWGLAHNGQEGVRHVLKMLREEFKTALQLMGCTSIEELQ 355 >gi|126313571|ref|XP_001366976.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 366 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 117/334 (35%), Gaps = 66/334 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + HL R L +S VD G ++SFP+ I TG + ++ Sbjct: 54 DENISAYKKIHLRPRYLRNMSV--VDTRTTIQGCEISFPVCIGP-TGFHCLCWPEGEKST 110 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+ + S +FE + AP+ + L +Q + + Sbjct: 111 AKAAQAMNICYVTSSFSTC--------TFEDIVAAAPNGLRWFQL-YIQHDRQLTKKLIQ 161 Query: 139 QAVHVLGADGLFLHL------NPLQ-------------------------EIIQPNGNTN 167 Q V LG L L + N LQ E + P + Sbjct: 162 Q-VEALGYKALVLTVDTAVLGNRLQDNRNKFSLGTFIQMKTFHVNIEENAETLLPISGID 220 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +A + + +P++LK + L+ D EL L ++ ++ GG I + Sbjct: 221 SSICWKDLAWIRTITQLPIILKGI---LTREDAELALNHNVQGIIVSNHGGRQLDTIPAT 277 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D +++ + GG+R G D+LK++ LGA L Sbjct: 278 IDALTEV-----------------VNAVKGRIEVYLDGGIRTGTDVLKALALGARCIFLG 320 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 P L + + + L+KEF SM L G Sbjct: 321 RPILWGLTYKGEEGIQQLLNLLKKEFYRSMALTG 354 >gi|194694808|gb|ACF81488.1| unknown [Zea mays] Length = 366 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 118/360 (32%), Gaps = 73/360 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + NK+ F R L I +D S LG K+S P++++ + Sbjct: 30 AEDQWTLKENKEAFSKILFRPRVL--IDVSHIDMSTSILGYKISMPIMVAPTA------L 81 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 ++ A A A + S ++ E+ AP + L V + D Sbjct: 82 HKLAHQEGEVASAQ--AAAAAGTIMTLSSWSSCSIEEVSSIAP-GLRFFQLS-VFKDRDI 137 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL----QEI----IQPNG--NTNFADL----------- 171 Q +A G + + ++ +E P F L Sbjct: 138 VQQLVRRA-ENAGYKAIAVTVDAPRLGRREADVRNRLPENVVLKCFEGLDLSKMDKTKGS 196 Query: 172 ---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 I L + +P+L+K V +++ D + ++ G+ ++ Sbjct: 197 GLAAYATSQIDSSLSWKDIKWLQTITGLPILVKGV---ITAEDARIAIECGVAGIIVSNH 253 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDIL 274 GG + + T LE GG+R G D+ Sbjct: 254 GGRQLDYLPA------------------TISCLEEVVREAKGRRVPVFLDGGIRRGTDVF 295 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGAS + P L A+D V A+ LR E ++M L G ++++ + + Sbjct: 296 KALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCASLKDITRDRVI 355 >gi|255647056|gb|ACU23996.1| unknown [Glycine max] Length = 368 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 58/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+ F R L + ++D + LG K+S P++I+ + + Sbjct: 30 AEDQWTLNENRNAFSRILFRPRIL--VDVSKIDLTTTVLGFKISMPIMIAPTA---MQKL 84 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL------- 123 L A AA M + S + A ++R + + + N+ Sbjct: 85 AHPEGELATARAASAAGTIMTLSSCASSSVEEVASTGSDIRFFQLYVLKDRNVVAQLVRR 144 Query: 124 ------GAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQPN------------- 163 A+ L D + +A + L L L + + Sbjct: 145 AERAGFKAIALTVDTPILGHREADIKNRLTLPLNLALKNFEGLDLGKLDKTSDSGLASYV 204 Query: 164 -GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G + + I L S +P+L+K V L+ D + +++G ++ G Sbjct: 205 AGQIDPSLNWKDIKWLQSITSLPILVKGV---LTVEDTRIAIQAGAAGIIVSNHGARQLD 261 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + T ++LE + + G+R G D+ K++ LGA Sbjct: 262 YVPA------------------TIMALEEVVKAAQGKIPVFLDSGIRRGTDVFKALALGA 303 Query: 282 SLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + P + A D V ++ LR E ++M L G + ++E+ + + Sbjct: 304 AGVFIGRPVVFSLAADGEAGVRKVLQMLRDELELTMALSGCRSLKEITRDHVVTEW 359 >gi|224076908|ref|XP_002305044.1| predicted protein [Populus trichocarpa] gi|222848008|gb|EEE85555.1| predicted protein [Populus trichocarpa] Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 112/364 (30%), Gaps = 80/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG K+S P++I+ KM Sbjct: 30 AEDQWTLKENRNAFSRILFRPRIL--IDVSKIDMSTTVLGFKISMPIMIAPTA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E S ++ + + + A + QL Sbjct: 86 HP---------EGEYATARAASAADTIMTLSSWATSSVEEVASTGP---GVRFFQLYVHK 133 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPL----------QEIIQPN--GNTNFADL------ 171 Q V G + L ++ P NF L Sbjct: 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTMPPYLTLKNFEGLDLGKMD 193 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + L + +P+LLK V L++ D L +++G Sbjct: 194 KTDDSGLASYVAEQIDRSLSWKDVKWLQTITSLPILLKGV---LTAEDARLAVQNGAAGI 250 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNG 270 ++ G + T ++LE + GG+R G Sbjct: 251 IVSNHGARQLDYVP------------------STIIALEEVVKAVQGRVPVFLDGGVRRG 292 Query: 271 VDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+ K++ LGAS + P + A D V ++ LR EF ++M L G + ++E+ Sbjct: 293 TDVFKAMALGASGIFIGRPVVFSLAADGEAGVRKVLQMLRDEFELTMALNGCRSLKEISR 352 Query: 330 NTAL 333 N + Sbjct: 353 NHIV 356 >gi|242208996|ref|XP_002470347.1| predicted protein [Postia placenta Mad-698-R] gi|220730654|gb|EED84508.1| predicted protein [Postia placenta Mad-698-R] Length = 577 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 119/352 (33%), Gaps = 53/352 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS---MTGGNN 69 + N + + R + +I +V S G S P+ IS M G+ Sbjct: 241 ADDENTYYENSAAYKRFWFRPRVMNKI--SQVSTSTTLFGLPSSLPIYISPTALMRLGHP 298 Query: 70 KMIERINRNLAIAAEKTKVAMAVG---SQRVM----FSDHNAIKSFEL---RQYAPHTVL 119 +N AA + + + S F+L + A + Sbjct: 299 D--GEMNAT--RAAGQEGILQGISNNASCSTEECMAVKRPEQHLIFQLYLNKDRAASEAI 354 Query: 120 ISNL-----GAVQLNYDFGVQKAHQAV------HVLGADGLFLHLNPLQEIIQPNGNTNF 168 I N+ A+ L D V + + F N + + + + Sbjct: 355 IRNIESQGFKAIMLTVDAAVPGKRELDQRTKGGDLKDMPAAFGKSNTGGGLGVSHAISGY 414 Query: 169 AD---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D + L S +P+++K + C D E +SG++ ++ GG Sbjct: 415 QDPDVCWDDVPWLKSRTKLPIIIKGIQC---VEDAERAFESGVQAIVLSNHGGRELDFSP 471 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ D + + GG+R G D+LK++ LGA G Sbjct: 472 APMTVLYELHQRRPD--------------LIQKHEVYIDGGVRRGTDVLKALCLGARGVG 517 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L PFL + + ++ LR+E I M L+G + +L L+++ Sbjct: 518 LGRPFLYANGVWGEEGCRRVVQILREEIITGMQLMGVTSLDQLR--PELVQY 567 >gi|240280076|gb|EER43580.1| cytochrome b2 [Ajellomyces capsulatus H143] Length = 511 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 123/353 (34%), Gaps = 64/353 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD L R L + E + + LG ++ PL +S M++ I + Sbjct: 148 DANKSFFDRTWLRPRVL--RNVKEANTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 78 NLA--IAAEKTKVAMAVG-SQRVMFSDHNAIKS--------FELRQYAPHTVLI------ 120 LA A E + + S D A + + A + Sbjct: 201 ELAVARACESRGIMHGISNSASYPMKDITAAGPRANYFFQLYVNKDRAKSAAQLRECSEN 260 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL------NPLQEIIQPNGNTNFAD--- 170 + A+ + D +A + AD L + + N + F D Sbjct: 261 PRIRAIFITVDAAWPGKREADERVRADESLSVPMSAQRAQNDSKGGGLGRVMGGFIDPAL 320 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 321 TWEDLVWARKHTHLPLVLKGV---MSADDAILAMKAGLDGILLSNHGGRNLDTSP----- 372 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQ----FIASGGLRNGVDILKSIILGASLGGL 286 P ++L C E GG+R G DILK++ LGA+ G+ Sbjct: 373 -------------PALVTLLELHKRCPEIFDKMGIYVDGGIRRGTDILKAVCLGATAVGM 419 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 L A + V + + E +M L+G + + + +NTA I H Sbjct: 420 GRSVLFAAAYGQEGVEHLFDIMADELEGAMRLVGITSLDQAHPGLVNTADIDH 472 >gi|254410250|ref|ZP_05024030.1| FMN-dependent dehydrogenase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183286|gb|EDX78270.1| FMN-dependent dehydrogenase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 122/360 (33%), Gaps = 69/360 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ + L+ R L + + D S LG+ LS P+LI+ + + Sbjct: 30 AWDEVTLRDNRTAFEKFKLLPRML--VDVSQRDLSTTVLGQSLSLPILIAPTA---FQCL 84 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP---HTVLISNLGAVQ 127 + A A AM + + + A+ S +++ + H+ L L V Sbjct: 85 AHPEGEIVTAKVAANVGSAMVLSTMSTQPLEEVALTSKQVQSDSQTDSHSPLWFQL-YVH 143 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---------------- 171 + +A G L L ++ + N L Sbjct: 144 RDRALTQNLVERA-EAAGYSALCLTVDAPVLGCREKDKRNQFTLPLGMQLANLVHRDIPE 202 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + L S +P+++K + G D ++ G + Sbjct: 203 TVGESGLFAYFVQQLDPSLTWQDLEWLQSLTKLPIIVKGILRG---DDALRAVEHGAKAV 259 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG + D S++ ++ + GG+R G Sbjct: 260 IVSNHGGRQLDSAIASIDALSEV-----------------VTAVGDQVDVLMDGGIRRGT 302 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+LK++ LGA + P L A+ V +E LR E V+M L G +VQ++ + Sbjct: 303 DVLKALALGAKAVLVGRPVLWGLAVAGEAGVQHVLELLRDELDVAMALSGCAKVQDIDQS 362 >gi|284036731|ref|YP_003386661.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirosoma linguale DSM 74] gi|283816024|gb|ADB37862.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirosoma linguale DSM 74] Length = 349 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 112/342 (32%), Gaps = 60/342 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ D L R L + +D V G L++P+L++ Sbjct: 40 AADEFTLRWNRQALDSIKLNTRVL--VDVSRIDTRVSLFGLDLAYPILVAPTA---YHRT 94 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 LA A A A+ + SF + + + QL Sbjct: 95 MHPEGELAT-ARGAGAAEALY----------VVSSFTNTPLSEIASVATQPLWFQLYVSD 143 Query: 133 GVQKAHQAVHVLGAD---GLFLHLNPLQEII----------QPNGNTNFAD--------- 170 ++ V A L + ++ + P G Sbjct: 144 DREQTKALVQEAEAQGCRALCVTVDTPVAGVRNRQQRVNFAMPEGIRTPHMADAFALTKS 203 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + L S +P+LLK + L+S D EL +++G+ ++ GG + + + + Sbjct: 204 LTWKDVDWLQSFAKIPILLKGI---LNSDDAELAIQAGVSGIIVSNHGGRNLDTVPATIE 260 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 I + GG+R G D++K+I LGA+ + P Sbjct: 261 ALPRIAE-----------------RVNKRVPVLMDGGIRRGTDVVKAIALGANAVLVGKP 303 Query: 290 F-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A +D V + LR E ++M L G + ++ + Sbjct: 304 ICFGLACGGADGVAKVLTILRTELELAMALTGKATLTDIDQS 345 >gi|169782195|ref|XP_001825560.1| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] gi|83774303|dbj|BAE64427.1| unnamed protein product [Aspergillus oryzae] Length = 369 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 109/353 (30%), Gaps = 69/353 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L+ R L V+ + G+ ++FPL +S + + Sbjct: 31 ATGQVTVRENSSAFQKYRLLPRVL--RDVSRVNTEIPLWGRNIAFPLCVSPA---GIQAM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA A K V M V S + + L + Sbjct: 86 AHPDGELATSRACAKMNVNMGVSSFSNHSVEDVVAAGMAIGPVHHVMQLY------SMKD 139 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN----------------PLQEIIQPNGNT-------- 166 + + G +FL + P + P N Sbjct: 140 RKTEEGIIRRAEAAGCKAIFLTADSPVLGVRYNEWRNGFQPSPGLGYPMLNRSPEDIAQQ 199 Query: 167 -----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + +I+ L S ++ + +K V L+ D+EL ++ I+ Sbjct: 200 SHDDGFNSFNSDSHSWAKEISWLRSVTNMEIWIKGV---LTPEDVELAVEYKCDGVVISN 256 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + D A+ + GG+R+GVDI K Sbjct: 257 HGGRQLDETPATIDALPPC-----------------AQAARGRIRIHVDGGIRSGVDIFK 299 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA + P L A + V + L ++F M L+G + E+ Sbjct: 300 ALALGAECCWVGRPALWGLAYNGEQGVELMLRILYEDFKRCMQLVGCTSISEI 352 >gi|321257975|ref|XP_003193767.1| cytochrome b2, mitochondrial precursor (L-lactate ferricytochrome C oxidoreductase) [Cryptococcus gattii WM276] gi|317460237|gb|ADV21980.1| Cytochrome b2, mitochondrial precursor (L-lactate ferricytochrome C oxidoreductase), putative [Cryptococcus gattii WM276] Length = 552 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 125/344 (36%), Gaps = 52/344 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+K F+ + R L + + EF+G K + P+ IS K+ Sbjct: 211 ADREKTAAENEKAFERYFFRPRILRDATTG--STETEFMGMKTTMPVFISPAA--MAKLG 266 Query: 73 ERINR-NLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL----RQYAPHTVLI 120 + NL A + A + + F++ + A +L Sbjct: 267 NPLGEVNLTRGAGACGIVQGISINASCSLDEIMNARKEGQPVMFQIYLNKDRAASVALLK 326 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLF-LHLNP-------------LQEIIQPNGNT 166 G F V A ++ + + L P + + I +T Sbjct: 327 KVTGLGANAIIFTVDTAWRSKRTMDVRAKAHVALPPSSTGQQKSASPLGVSQAISGYQDT 386 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N I + ++P+++K V S D++L K+G++ ++ GG + Sbjct: 387 NLTW--KDIDFIRQHTNLPIIVKGVQ---SVEDVDLCAKAGVQGVILSNHGGRQCDYAPA 441 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGG 285 DL + L RP ++ + + GG+R+G D++K+I LGA G Sbjct: 442 PIDLLYE---------------LRCNRPDLFDKIEVMMDGGVRSGADVVKAIALGAKAVG 486 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + FL + VV + L +E +M +G R+++L Sbjct: 487 IGRSFLYANGTHGEEGVVRLCQILSEEITNTMRNIGAPRLEDLK 530 >gi|183600694|ref|ZP_02962187.1| hypothetical protein PROSTU_04286 [Providencia stuartii ATCC 25827] gi|188019796|gb|EDU57836.1| hypothetical protein PROSTU_04286 [Providencia stuartii ATCC 25827] Length = 404 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 126/361 (34%), Gaps = 73/361 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D+N + FD +++ R + I ++D S +FLG L P++ + M Sbjct: 69 AEDELNLDKNTRSFDRKYIMPRVMQGIEIKDIDLSTQFLGIDLKTPIIQAPMA------A 122 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNY 130 + + A +A A + + I+ E+ + + + L Sbjct: 123 QGLAHQDGEIATAKGMAKAGSIFSLSTYGNKTIE--EVAEVSGESPFFFQLYMSKNNAFN 180 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 +F +++A ++ GA + L ++ P+ + + NF Sbjct: 181 EFTLKRAKES----GAKAIILTVDSPVGGYREDDIRNNFQFPLGFANLELFAKQNDDGSK 236 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + IA + +P+++K + S D + +K+G Sbjct: 237 TGKGAGISEIYAQAKQAFTPADIAYVKKLSGLPVIVKGIQ---SPEDADRVIKAGADAIW 293 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + D+ I A+ + G+R G Sbjct: 294 VSNHGGRQLDSGPASFDVLPSI-----------------AKVVNKRVPIVFDSGVRRGSH 336 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + ++ V + I+ L KE ++M L G K ++ + Sbjct: 337 VFKALASGADVVAVGRPILYGLNLGGAEGVNSVIQQLNKELSINMMLGGAKNIESVKATK 396 Query: 332 A 332 Sbjct: 397 L 397 >gi|301782817|ref|XP_002926824.1| PREDICTED: hydroxyacid oxidase 1-like [Ailuropoda melanoleuca] Length = 370 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 115/357 (32%), Gaps = 78/357 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + EVD S LG+++S P+ + + + Sbjct: 31 ANDEETLADNSAAFSRWKLYPRML--RNVAEVDLSTSVLGQRVSMPICAGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 ++ LA A M + S + E+ + +P + L + + Sbjct: 86 AHVDGELATVRACRSLGTGMMLSSWSTSSIE-------EVAEASPEALRWLQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN------------------PLQEIIQPNGNT------ 166 D Q +A G +FL ++ P + N Sbjct: 138 DVTKQLVQRA-ERKGYKAIFLTVDTPYLGNRFDDVRNSFKLPPHLRMKNFETNDLAFSPK 196 Query: 167 -NFAD----------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 NF D I L +P++ K + G D +K G+ Sbjct: 197 ENFGDKSGLASYVTKSIDPSISWEDIKWLRGLTSLPIVAKGILRG---DDAREAVKHGLN 253 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + + D +I + + GG+R Sbjct: 254 GILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEVFLDGGVRK 296 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 297 GTDVLKALALGAKAVFVGRPIIWGLASQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|113476028|ref|YP_722089.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Trichodesmium erythraeum IMS101] gi|110167076|gb|ABG51616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Trichodesmium erythraeum IMS101] Length = 359 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 63/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ ++ + L R L + + + S + LG+ + P+LI+ M + + Sbjct: 30 AWDEVTLRDNRTAYEKYKLRPRML--VDVSQRNLSTKILGQLMKMPILIAPMA---FQCL 84 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI 120 L A A + M + + + A+ + + R L+ Sbjct: 85 AHPEGELATARVAADHGITMVLSTMSTKSLEDVALATNVPQSLWFQLYVHRDRFLTRTLV 144 Query: 121 SNLGAVQ-----LNYD---FGVQKAHQAVHVLGADGLFL-HLNPLQEIIQPNGNT----- 166 A L D GV++ + GL L +L + + P Sbjct: 145 ERAKAAGYQALCLTVDAPVLGVRERDRRNQFTLPSGLELANLTSMANLEIPETEEESGLF 204 Query: 167 -------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + A + L S +P+++K + G D ++ G + ++ GG Sbjct: 205 AYVANQFDPALTWQDLEWLQSLTSLPVIVKGILRG---DDAVRAVEHGAKGIIVSNHGGR 261 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSII 278 I T +L E+ N+ + GG+R G DILK++ Sbjct: 262 QLDGA------------------IATIDALPEVVAAVGNKVDVLMDGGIRRGTDILKALA 303 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LGA + P L A++ V +E LR E V+M L G +V+ +N +L+R Sbjct: 304 LGAKAVLIGRPVLWALAVNGETGVHHLLELLRNELDVAMALSGCAKVE--NINPSLVR 359 >gi|296827054|ref|XP_002851109.1| cytochrome b2 [Arthroderma otae CBS 113480] gi|238838663|gb|EEQ28325.1| cytochrome b2 [Arthroderma otae CBS 113480] Length = 503 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 131/358 (36%), Gaps = 74/358 (20%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R L + EV+ + + LG +S PL ++ + M++ I + Sbjct: 157 DANKSSFDRIWFRPRVL--RNVREVNTTSKILGSSVSMPLFVAP-----SAMVKLIHPDG 209 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----- 120 L A A E + + S FS ++ + R+ A + Sbjct: 210 ELGIARACEAKGIMQGI-SNNASFSLKEISEAAPNTKFIFQLYVNRERAKSAAQLRECSA 268 Query: 121 -SNLGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 S + A+ + D +A + AD L L + P + N + L Sbjct: 269 NSQIKAICITVDAAWPGKREADERVKADENLSLPMVPAK----GNNDKKGGGLGRVMAGF 324 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 325 IDPGLTWEDLKWARQHTHLPLLLKGVQ---SADDAMMAMEAGIDGIMLSNHGGRNLDTSP 381 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 + + ++L C E + G+R G DILK++ LGA Sbjct: 382 A------------------SIITLLELHRRCPEIFDRMEIYVDSGIRRGTDILKAVCLGA 423 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + G+ FL + + V I+ +R E +M +G + + Y+NTA I H Sbjct: 424 TAVGMGRSFLFASNYGQEGVEHLIDIMRDELEGAMRNIGITSLDQAGPQYVNTADIDH 481 >gi|303316498|ref|XP_003068251.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107932|gb|EER26106.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038020|gb|EFW19956.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 504 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 114/338 (33%), Gaps = 55/338 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-N 78 D NK F D + R L + EVD LG + PL +S K++ Sbjct: 147 DANKSFLDRIFMRPRVL--RNVREVDTRTRILGCNVDMPLFVSPAA--MVKLMHPDGELA 202 Query: 79 LAIAAEKTKVAMAVGS-QRVMFSDHNAIKS--------FELRQYAPHTVLI------SNL 123 +A A E ++ + + D A + R L+ + Sbjct: 203 IARACENKRLVQGISNNASYSMKDITAAGPGVDYFFQLYVNRDRTKSEELLRECSANPRI 262 Query: 124 GAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL------NPLQEIIQPNGNTNFAD---LSS 173 A+ + D +A + AD L + + N + + D + Sbjct: 263 KAIFITVDAAWPGKREADERVKADESLTVPMVDAKTRNDKKGGGLGRVMADSIDPGLTWA 322 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +PL+LK V +S+ D L + +G+ ++ GG + Sbjct: 323 DLVWARKHTHLPLILKGV---MSADDAILAMDAGMDGILLSNHGGRNLDTSP-------- 371 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASP 289 P ++L C E + G+R G DILK + LGA+ G+ Sbjct: 372 ----------PPIITLLELHKRCPEIFDKMEIYVDSGIRRGTDILKCLCLGATAVGMGRS 421 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A + V + ++ E +M L+G + +L Sbjct: 422 VLFAANYGQEGVEHLFDIMKDELEGAMRLVGITSLDQL 459 >gi|156065351|ref|XP_001598597.1| hypothetical protein SS1G_00686 [Sclerotinia sclerotiorum 1980] gi|154691545|gb|EDN91283.1| hypothetical protein SS1G_00686 [Sclerotinia sclerotiorum 1980 UF-70] Length = 497 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 120/358 (33%), Gaps = 66/358 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRN 78 RN + D L R L + V LG +L P+ S +M + E R Sbjct: 144 RNSSTYADIGLRPRIL--RNVKNVSTQTTMLGNQLDLPIFCSPAAMAKLVHPEGE---RE 198 Query: 79 LAIAAEKTKVAMAVGSQR---------VMFSDHNAIKS-----------FELRQYAPHTV 118 LA + AM V + + +H+ + ++ Sbjct: 199 LARGLKSAGSAMTVSTNASFPIAEIFEAVSENHSQTSGGPKDLPIFFQLYVDKERHKSEK 258 Query: 119 LISNL-----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------- 166 L+ N+ A+ + D V +A + AD P+ N Sbjct: 259 LLQNVEALGVKAIFVTVDAPVPGKREADERVKADESLST--PMSGAKAKNDKKGGALGRI 316 Query: 167 -----NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + S IA L +P+LLK V L D ++ L GI I+ GG S Sbjct: 317 MGAYIDATLSWSDIAWLRRCTKLPILLKGVQTSL---DAKMALDHGIDGILISNHGGRSL 373 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + ++ A + + GG+ G DI K++ LGA Sbjct: 374 DTSPASILVLLEMQK--------------NAPEVFDGMEVFIDGGIMRGTDIFKALCLGA 419 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 G+ FL + V IE L+ E +M ++G V +++ LNT + H Sbjct: 420 KAVGIGRGFLFALGWGREGVEKYIEILKDELETTMRMMGVTDVSQVHPGMLNTRAVDH 477 >gi|119188183|ref|XP_001244698.1| hypothetical protein CIMG_04139 [Coccidioides immitis RS] Length = 504 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 114/338 (33%), Gaps = 55/338 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-N 78 D NK F D + R L + EVD LG + PL +S K++ Sbjct: 147 DANKSFLDRIFMRPRVL--RNVREVDTRTRILGCNVDMPLFVSPAA--MVKLMHPDGELA 202 Query: 79 LAIAAEKTKVAMAVGS-QRVMFSDHNAIKS--------FELRQYAPHTVLI------SNL 123 +A A E ++ + + D A + R L+ + Sbjct: 203 IARACENKRLVQGISNNASYSMKDITAAGPGVDYFFQLYVNRDRTKSEELLRECSANPRI 262 Query: 124 GAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL------NPLQEIIQPNGNTNFAD---LSS 173 A+ + D +A + AD L + + N + + D + Sbjct: 263 KAIFITVDAAWPGKREADERVKADESLTVPMVDAKTRNDKKGGGLGRVMADSIDPGLTWA 322 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +PL+LK V +S+ D L + +G+ ++ GG + Sbjct: 323 DLVWARKHTHLPLILKGV---MSADDAILAMDAGMDGILLSNHGGRNLDTSP-------- 371 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASP 289 P ++L C E + G+R G DILK + LGA+ G+ Sbjct: 372 ----------PPIITLLELHKRCPEIFDKMEIYVDSGIRRGTDILKCLCLGATAVGMGRS 421 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A + V + ++ E +M L+G + +L Sbjct: 422 VLFAANYGQEGVEHLFDIMKDELEGAMRLVGITSLDQL 459 >gi|134133250|ref|NP_001077011.1| hydroxyacid oxidase 1 [Danio rerio] gi|133778702|gb|AAI33874.1| Hao1 protein [Danio rerio] Length = 369 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 119/371 (32%), Gaps = 80/371 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W R L VD S LG+++S P+ +S+ +M Sbjct: 31 ADEQETLRDNVAAFKRWCFYPRVL--RDVSSVDLSTTVLGQRVSLPICVSATA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A A + M + S + E+ + AP V L + + Sbjct: 87 HPDGETATARACLSSGTGMMLSSWSTSSIE-------EVCEAAPGAVRWLQL-YIYKDRG 138 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------------PLQEIIQPN 163 +A G G+F+ ++ P + Sbjct: 139 LTQSLVRRA-EDAGYKGIFVTVDTPYLGRRRDDVRNRFKLPSHLRMANFESPDLAFSKKE 197 Query: 164 GNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 G + L I L + +P+++K V L++ D + LK G+ Sbjct: 198 GYGEDSGLAVYVTQAIDATVRWQDIGWLKTLTKLPVVVKGV---LTAEDAKEALKYGVDG 254 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + + D ++ + + GG+R G Sbjct: 255 ILVSNHGARQLDGVPATIDALPEV-----------------VAAVAGQVEVFMDGGVRMG 297 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE--- 326 D+LK++ LGA + P L A V +E LR+E +++ L G + ++E Sbjct: 298 SDVLKALALGAKAVFIGRPVLWALACQGEKGVSDVLEILREELHLALALAGCRSLKEVNR 357 Query: 327 -LYLNTALIRH 336 L LI Sbjct: 358 SLLRRPELISR 368 >gi|312213907|emb|CBX93909.1| similar to mitochondrial cytochrome b2 [Leptosphaeria maculans] Length = 499 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 112/359 (31%), Gaps = 68/359 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKM 71 + N ++ R + + +VD + G P IS M T G Sbjct: 137 ANTGASLRGNLDDWERITFRPRVM--RNVGDVDTRRKIFGYSSPHPFYISPMGTLGAIHP 194 Query: 72 IERINRNLAIAAEKTKVAMAVGS-------------QRVMFSDHNAIK---SFELRQYAP 115 + + V ++ S ++ + + K F + Sbjct: 195 GAEPELIVGAVRKGAHVVVSTASTKSSKQIMQSYVDEQARLKNGSPTKLFFQFYMPVDRK 254 Query: 116 HTVLISNL------GAVQLNYDFGVQKAHQAVHVLGA-DGLFLHLNPLQ-EIIQPNGNTN 167 + + N+ + + D V A L A + L + + + G+ + Sbjct: 255 KAIELMNIAKRAGYKGLWITVDTPVLGKRTADRSLQAEEALAVGIEEQSTAGFEAGGDND 314 Query: 168 FA---------------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 FA + + P++LK + C D +L ++ G Sbjct: 315 FAPAMGGRPVQGQLSPYTTWEDLEWVRKEWTGPIVLKGIQCA---EDAKLAMQYGCDGIL 371 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLR 268 ++ GG ++L R Y E + GGLR Sbjct: 372 LSNHGGRQLHTAP------------------SALMTLLEIRTYSPEVLGKLEIFVDGGLR 413 Query: 269 NGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +G D+LK++ LGA+ G+ PFL + V ++ L +E M LLG + + Sbjct: 414 DGNDVLKALCLGATAVGVGRPFLYALGAYGAKGVERCVDILAEELQTGMRLLGITSLDQ 472 >gi|332641995|gb|AEE75516.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 373 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 92/376 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I +++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + ++ L AEK Sbjct: 87 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRKVVEQLVRRAEK 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + ++ Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNFEGLDLG-----KMDEASID 197 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D L + + + I L + ++P+L+K V L+ D + Sbjct: 198 QIANDS------GLASYVAGQIDRTLSW--KDIQWLQTITNMPILVKGV---LTGEDARI 246 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 247 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRVPV 288 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 289 FLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSG 348 Query: 321 TKRVQELYLNTALIRH 336 + + E+ N + Sbjct: 349 CRSLSEITRNHIVTEW 364 >gi|226287846|gb|EEH43359.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 499 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 122/355 (34%), Gaps = 68/355 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FFD R L + V+ + + LG S PL +S M + I Sbjct: 148 DANKSFFDRTWFRPRVLRK--VRNVNTNTKILGCDSSMPLFVSPAA-----MAKLIHPDG 200 Query: 76 NRNLAIAAEKTKVAMAVG-SQRVMFSD-----HNAIKSFELRQYAPHTVLIS-------- 121 +A A E + + S D A F+L + Sbjct: 201 ELAIARACESRFIIQGISNSASYSMKDITAAGPQANYFFQLYVNKDRAKSAAHLHECSEN 260 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------------NF 168 + AV + D +A + AD + + P+ E N + + Sbjct: 261 PRIRAVFITVDAAWPGKREADERVRADE-SISV-PMSEQRACNDSHGGGLARSMSGFIDP 318 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + + +PL+LK V +S+ D L +K+G+ ++ GG + Sbjct: 319 SLSWEDLVWARKHTHLPLVLKGV---MSADDAMLAMKAGLNGILLSNHGGRNLDTSP--- 372 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLG 284 P L+L C E + GG+R G DILK++ LGA+ Sbjct: 373 ---------------PALLTLLELHKRCPEIFDKMEIYLDGGIRRGSDILKAVCLGATAV 417 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 G+ L + V + ++ E +M L+G + E +NTA I H Sbjct: 418 GMGRSVLYATNYGQEGVEHLFDIMKDELEGAMRLVGITSLDEARPELVNTADIDH 472 >gi|205356940|ref|ZP_02343660.2| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324906|gb|EDZ12745.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 401 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 116/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 65 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 118 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 119 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 177 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 178 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 232 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 233 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 289 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 290 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 332 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 I K++ GA + + P L + + V + I L KE ++M L G + ++++ Sbjct: 333 IFKALASGADIVAVGRPVLYGLNLGGAQGVASVIAQLNKELTINMMLGGARNIEQVKTTR 392 Query: 332 AL 333 L Sbjct: 393 LL 394 >gi|226500726|ref|NP_001152347.1| hydroxyacid oxidase 1 [Zea mays] gi|195655381|gb|ACG47158.1| hydroxyacid oxidase 1 [Zea mays] Length = 368 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 116/362 (32%), Gaps = 75/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + NK F + R L I +D S LG K+S P++++ + Sbjct: 30 AEDQWTLKENKGAFSKILVRPRVL--IDVSHIDMSTSILGYKISMPIMVAPTA------L 81 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 ++ A A A + S ++ E+ AP + L V + D Sbjct: 82 HKLAHQEGEVASAQ--AAAAAGTIMTLSSWSSCSIEEVSSSAP-GLRFFQLS-VFKDRDI 137 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNG--NTNFADL--------- 171 Q +A G + + ++ P F L Sbjct: 138 VQQLVRRA-ENAGYKAIAVTVDAPRLGRREADVRNRFTLPENVVLKCFEGLDLSKMDKTK 196 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I L + +P+L+K V +++ D + ++ G+ ++ Sbjct: 197 GSGLAAYATSQIDSSLSWKDIKWLQTITGLPILVKGV---ITAEDARIAIECGVAGIIVS 253 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVD 272 GG + + T LE GG+R G D Sbjct: 254 NHGGRQLDYLPA------------------TISCLEEVVREVKGRRVPVFLDGGIRRGTD 295 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGAS + P L A+D V A+ LR E ++M L G ++++ + Sbjct: 296 VFKALALGASGVFIGRPVLFALAVDGRAGVRNALRMLRDELEITMALSGCSSLKDITRDR 355 Query: 332 AL 333 + Sbjct: 356 VI 357 >gi|223943087|gb|ACN25627.1| unknown [Zea mays] Length = 367 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 122/356 (34%), Gaps = 64/356 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNK 70 + N++ F R L I +D + LG +S P++I S+M + Sbjct: 30 AEDQWTLKENREAFSRILFRPRVL--IDVSRIDMATNILGFSISMPIMIAPSAM-----Q 82 Query: 71 MIERINRNLAIAAEKTKVA-------MAVGSQRVMFSDHNAIKSFELRQYAPHTVL---- 119 + + LA A + S + S I+ F+L Y ++ Sbjct: 83 KMAHPDGELATARAAASAGTIMTLSSWSTSSVEEVNSVGPGIRFFQLYVYKDRNIVRQLV 142 Query: 120 ----ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH--LNPLQEI-IQPNGNTNFADL- 171 ++ A+ L D + + + L H L Q + + TN + L Sbjct: 143 KRAEMAGFKAIALTVDTPI-LGRREADIKNRFALPPHLVLKNFQALDLGTMDKTNDSGLA 201 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + L + +P+L+K + +++ D L ++ G ++ G Sbjct: 202 SYVAGQVDRTLSWKDVKWLQTITSLPILVKGI---VTAEDTRLAIEYGAAGIIVSNHGAR 258 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSII 278 + + T LE R GG+R G D+ K++ Sbjct: 259 QLDYVPA------------------TISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALA 300 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGAS + P L A+D V ++ LR E ++M L G ++E+ + Sbjct: 301 LGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLREITRAHVI 356 >gi|242074364|ref|XP_002447118.1| hypothetical protein SORBIDRAFT_06g028990 [Sorghum bicolor] gi|241938301|gb|EES11446.1| hypothetical protein SORBIDRAFT_06g028990 [Sorghum bicolor] Length = 367 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 121/356 (33%), Gaps = 64/356 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNK 70 + N++ F R L I +D + LG +S P++I S+M + Sbjct: 30 AEDQWTLKENREAFSRILFRPRVL--IDVSRIDMATNVLGFNISMPIMIAPSAM-----Q 82 Query: 71 MIERINRNLAIAAEKT--KVAMAVGSQRVMFSDH-----NAIKSFELRQYAPHTVL---- 119 + + LA A M + S D I+ F+L Y ++ Sbjct: 83 KMAHPDGELATARAAASAGTIMTLSSWSTSSVDEVNSVGPGIRFFQLYVYKDRNIVRQLV 142 Query: 120 ----ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNGNTNFADL- 171 ++ A+ L D + + + L HL N + TN + L Sbjct: 143 KRAEMAGFKAIALTVDTPI-LGRREADIKNRFTLPPHLTLKNFEALDLGTMDKTNDSGLA 201 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I L + +P+L+K V +++ D L ++ G ++ G Sbjct: 202 SYVAGQVDRTLSWKDIKWLQTITSLPILVKGV---VTAEDTRLAIEYGAAGIIVSNHGAR 258 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSII 278 + + T LE R GG+R G D+ K++ Sbjct: 259 QLDYVPA------------------TISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALA 300 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGAS + P L A+D V ++ LR E ++M L G ++E+ + Sbjct: 301 LGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLREITRAHVI 356 >gi|160880389|ref|YP_001559357.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] gi|160429055|gb|ABX42618.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] Length = 343 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 111/317 (35%), Gaps = 42/317 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE-----RI 75 RN + + L L ++ +D GK+ ++P + + + Sbjct: 51 RNYDKWKEIRLNMDTL--VAASNIDTKRTIYGKEFAYPFFAGPVGAISLHYGDSYNDLTY 108 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A +A G + +K+ V + + LN ++ Sbjct: 109 NEVLVKACADAGIAAFTGDG----VNPEVMKAATDCIKLVDGVGVPTVKPWNLN---TIK 161 Query: 136 KAHQAVHVLGADGLFLHLN----PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + Q + A + + ++ P + +QP ++ + ++ P ++K V Sbjct: 162 EKSQLIKDCNAFAVAMDVDAAGLPFLKNMQPPAGRKS---VEELREIIQQINRPFIVKGV 218 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ E ++G ++ GG + S ++ +I F+ Sbjct: 219 ---MTVKGAEKAFEAGASGILVSNHGGRVLDQCPSTAEVLEEIAKEFKG----------- 264 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 + GG+R+G D+ KS+ LGA +A PF+ + V + I+ + Sbjct: 265 ------KMTIFVDGGIRSGADLFKSLALGADAAIIARPFVTAVFGGGYEGVRSYIQKIGA 318 Query: 311 EFIVSMFLLGTKRVQEL 327 E I M + G + E+ Sbjct: 319 ELIDVMEMCGVSSLDEI 335 >gi|322703592|gb|EFY95199.1| peroxisomal (S)-2-hydroxy-acid oxidase [Metarhizium anisopliae ARSEF 23] Length = 403 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 120/371 (32%), Gaps = 85/371 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMI 72 + + RN +D +++ R L +VD VE G KL+ P+ I S+M + Sbjct: 43 EQKLLKRNMSGYDRLYIVPRVL--RDVSDVDTRVEMFGSKLNMPIGIAPSAMQRLAGRGG 100 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E ++A AA +V + SQ ++ P + Q + D Sbjct: 101 EI---DVARAAVHERVNFTLSSQSTTSLENVMAVKTSQGDSTPTPDFWFQIYLTQ-DLDK 156 Query: 133 GVQKAHQAVHVLGADGLFLHL------NPLQE----IIQPNGNTNFA------------- 169 V +A V G L + + N + E + P G Sbjct: 157 SVDLIKRA-EVAGYKALVVTVDTPVLGNRVNERKNVLALPRGMRLANLEEDDADSAKTPT 215 Query: 170 --------------------------------DLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + ++ L + ++LK V ++ Sbjct: 216 PTRNRLLMDARTKHDARLVVELGGGEMHASNLSWAKTLSFLRGVTTMKIVLKGV---MTP 272 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D L + G ++ GG S ++ +DI A Sbjct: 273 QDARLAILYGADAIVVSNHGGRQLDDAPSTIEVLADI-----------------AHAVRG 315 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSM 316 I GG+R G D+ K+I LGA L + P L A D V A + L +E +M Sbjct: 316 RIPIILDGGIRRGADVFKAIALGADLVWIGRPVLWGLAYDGDKGVGAVLNILERELSRTM 375 Query: 317 FLLGTKRVQEL 327 L G + + E+ Sbjct: 376 ALAGVREISEI 386 >gi|291229841|ref|XP_002734879.1| PREDICTED: hydroxyacid oxidase 1-like, partial [Saccoglossus kowalevskii] Length = 396 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 110/339 (32%), Gaps = 52/339 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N+ F + L R L I D S L ++ P+ + + K Sbjct: 67 AGNQSTQQDNETAFKRYRLRQRVLKNI--AAPDMSTTLLDSHVTLPIGLGPV---LRKSW 121 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQ---------RVMFSDHNAIKSFELRQYAPHTVLIS 121 +L A AA + + V RV ++ + +Q ++ Sbjct: 122 AWPKGDLCSARAAGEYGICEIVPCYSEQSLEEIARVNTESIKWLQIYLSKQAYHKELIRR 181 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLG-ADGLFLHL-----------NPLQEIIQPNGNTNFA 169 A V + + + +F H+ N ++ Q A Sbjct: 182 AEAAGYKAIVVTVDGHWKRIVYSDWRNMIFKHMLKTTHGNFNGDNFIKAYSQH--VVEHA 239 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I ++ ++P++LK + + D L +K G + ++ GG + D Sbjct: 240 SWDD-IQEVTKITNLPIILKGI---MEPEDALLAIKYGAKAIIVSNHGGRMMDSLPGALD 295 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + +I + E + GG+R G DILK++ LGA + P Sbjct: 296 VLPNI-----------------VKAVNGEIEVYLDGGVRYGGDILKALALGAKACFIGRP 338 Query: 290 FLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L + V + L+++ +M G K + ++ Sbjct: 339 LLYGLSYQGEEGVKQVLNLLKEDLERAMLCTGCKSISQI 377 >gi|148230794|ref|NP_001082500.1| hypothetical protein LOC398510 [Xenopus laevis] gi|49115931|gb|AAH73662.1| LOC398510 protein [Xenopus laevis] Length = 356 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 122/345 (35%), Gaps = 51/345 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N + F L R L ++S +D LG+ +S P+ I+ T + Sbjct: 29 ADECYTRDDNLQGFRRIRLRPRMLRDVSV--MDTKTTVLGEDISCPIAIAP-TAFHCLAW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFEL-----RQYAPHTVLIS 121 + A AAE K+ + + + ++ F+L R+ + + Sbjct: 86 SDGEMSTARAAEALKLLYVASTYATCSVEEISQAAPEGLRWFQLYVYRERKLSERLIRRV 145 Query: 122 N-LGAVQLNYDFGV-QKAHQAVHVLGADGLFLHLNP------------LQEIIQPNGNTN 167 LG L V + + L HL P + Sbjct: 146 EALGFKALVLTVDVPYTGKRRTDIRNNFQLPPHLKVKNFEGVFEGHSGPDNYGVPLNTLD 205 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + I L S ++P+++K + L+ D EL + G++ ++ GG Sbjct: 206 PSVSWKDICWLRSVTNLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGG--------- 253 Query: 228 RDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 R L+ ++ T +L + GG+R G D+LK+I LGA L Sbjct: 254 RQLDGELA---------TIDALSEIVEVVQGRIEVYLDGGIRTGSDVLKAIALGAKCVFL 304 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P + + V ++ L EF +SM L G + + E+ N Sbjct: 305 GRPIVWGLTYKGEEGVKGILQILTDEFRLSMALSGCRNISEVNRN 349 >gi|54043095|gb|AAV28535.1| glycolate oxidase [Brassica napus] Length = 367 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 119/377 (31%), Gaps = 98/377 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + ++ L AEK Sbjct: 87 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRKVVEQLVRRAEK 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNFEGLDLGK----------MD 192 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + + + L + +P+L+K V L+ D + Sbjct: 193 EANDSGLA-------SYVAGQIDRTLSW--KDVQWLQTITSMPILVKGV---LTGEDARI 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRVPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSG 342 Query: 321 TKRVQELYLNTALIRHQ 337 + + E+ N + + Sbjct: 343 CRSLSEITRNHIITEWE 359 >gi|154322399|ref|XP_001560514.1| hypothetical protein BC1G_00542 [Botryotinia fuckeliana B05.10] gi|150847876|gb|EDN23069.1| hypothetical protein BC1G_00542 [Botryotinia fuckeliana B05.10] Length = 496 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 121/359 (33%), Gaps = 66/359 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINR 77 DRN + D L R L + V LG ++ P+ S +M + E R Sbjct: 142 DRNTSTYADISLRPRIL--RNVKNVSTRTTMLGSQMEVPIFCSPAAMAKLVHPQGE---R 196 Query: 78 NLAIAAEKTKVAMAVGSQRVMF---------SDHNAIKS-----------FELRQYAPHT 117 LA AM V + +H+ + + ++ Sbjct: 197 ELARGLRSAGSAMTVSTNASFPIAEIFEAACENHSQTSNERRELPVFFQLYVDKERHKSE 256 Query: 118 VLIS---NLG--AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------ 166 L+ NLG A+ + D V +A + AD P+ N Sbjct: 257 KLLQDVENLGVKAIFVTVDAPVPGKREADERVKADESLST--PMSGAKAKNDKKGGALGR 314 Query: 167 ------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + S IA L +P+LLK V L D ++ L GI I+ GG S Sbjct: 315 IMGAYIDATLSWSDIAWLRRCTKLPILLKGVQTSL---DAKMALDYGIDGILISNHGGRS 371 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + ++ A + + GG+ G DI K++ LG Sbjct: 372 LDTSPASILVLLELQK--------------NAPEVFDGMEVFIDGGIMRGTDIFKALCLG 417 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 A G+ FL + V I+ L+ E +M ++G + +++ LNT + H Sbjct: 418 AKAVGIGRGFLFALGWGHEGVEKYIDILKDELETTMRMMGITDLSQVHPGMLNTRAVDH 476 >gi|161613922|ref|YP_001587887.1| hypothetical protein SPAB_01660 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363286|gb|ABX67054.1| hypothetical protein SPAB_01660 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 400 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 116/362 (32%), Gaps = 73/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNSFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLS----------------- 172 Q GA + L ++ P+ + + NF Sbjct: 177 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNFQFPLGFANLEMFARKNDDGSK 231 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 IA + +P+++K + S D E+ +++G Sbjct: 232 TGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIW 288 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S D+ I A+ I G+R G Sbjct: 289 VSNHGGRQLDSGPSSFDMLPAI-----------------AKVVNKRVPVIFDSGVRRGSH 331 Query: 273 ILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ GA + + P L + + V + IE L KE ++M L G + ++++ Sbjct: 332 VFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTR 391 Query: 332 AL 333 L Sbjct: 392 LL 393 >gi|304368145|gb|ADM26718.1| glycolate oxidase [Nicotiana benthamiana] Length = 371 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 119/357 (33%), Gaps = 60/357 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG K+S P++I+ KM Sbjct: 30 AEDQWTLAENRNAFSRILFRPRIL--IDVSKIDMSTTVLGFKISMPIMIAPTA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 86 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 145 Query: 120 -ISNLGAVQLNYDFGVQKAHQA-----------VHVLGADGLFLH-LNPLQE-----IIQ 161 + A+ L D +A + + +GL L ++ + + Sbjct: 146 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLDLGKMDQASDSGLASYVA 205 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V L++ D L +++G ++ G Sbjct: 206 GQIDRTLSW--KDVQWLQTITSLPILVKGV---LTAEDARLAVQAGAAGIIVSNHGARQL 260 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T ++LE + GG+R G D+ K++ LG Sbjct: 261 DYVP------------------STIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 302 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 AS + P + A + + ++ LR EF ++M L G + + E+ N + Sbjct: 303 ASGIFIGRPVVFSLAAEGEAGIKKVLQMLRDEFELTMALSGCRSLNEITRNHIVTEW 359 >gi|321252383|ref|XP_003192388.1| L-lactate dehydrogenase (cytochrome) [Cryptococcus gattii WM276] gi|317458856|gb|ADV20601.1| L-lactate dehydrogenase (cytochrome), putative [Cryptococcus gattii WM276] Length = 593 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 73/368 (19%), Positives = 122/368 (33%), Gaps = 55/368 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + H R L + + D S LG K S P++IS K+ Sbjct: 235 ADDELTKNENNTSYRKIHFRPRVLRK--VAQADASTTILGYKSSLPVMISPAA--MAKLG 290 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSDHNAIKS------FEL-----RQYAPHTVL 119 + N+ A T + + S + A +S F+L R A + Sbjct: 291 HPLGEVNMTRGAANTGIIQCISSFASCSLEEICAARSDNQPLFFQLYVNSKRDLAAEVLK 350 Query: 120 IS---NLGAVQLNYDFGVQKAHQA-------VHVLGADGLFLHLNP--LQEIIQPNGNTN 167 NL A+ L D V + H + + E + + + Sbjct: 351 RVNRLNLNAILLTVDAAVGGKRERDLRLKGNFEPPKTGAFEKHDDTKGVSEAMFAGVDPD 410 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 I + S +PLL+K V + D L + G ++ GG + Sbjct: 411 LCW--DDIKWIRSQTKLPLLIKGVQ---TVEDAILAYRLGADGVVLSNHGGRQLDTTHTG 465 Query: 228 RDLESDI---GIVFQD------WGIPTPLSLE----------MARPYCNEAQFIASGGLR 268 D +I G+ P +LE +P + GG+ Sbjct: 466 IDTLLEIRKHAPYLLRPEYRGPVGLQ-PAALEHPENLTPPDPQGKPTDRPFEIWVDGGIW 524 Query: 269 NGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D +K++ LGA+ G FL A+ V A+ E + +M LLG +V +L Sbjct: 525 RGSDAVKALCLGANAVGAGRGFLYANAVGGQQGVEHAVNIFSAEILTTMRLLGVNKVDQL 584 Query: 328 YLNTALIR 335 + I+ Sbjct: 585 RPSMVEIK 592 >gi|224368360|ref|YP_002602523.1| LldD [Desulfobacterium autotrophicum HRM2] gi|223691076|gb|ACN14359.1| LldD [Desulfobacterium autotrophicum HRM2] Length = 341 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 107/326 (32%), Gaps = 36/326 (11%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N D+ R + + D + FLG L+ P+L + + G + M +I Sbjct: 42 AFKANLTALDNLTFNMRLIH--DVTDPDTTASFLGMDLALPVLAAPIGGVSFNMGGKITE 99 Query: 78 NLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A + + G F + + +RQ + +D Sbjct: 100 QAYIEAIVHGCQAKGILGCTGDGVPDFIHESGFE--AIRQAQGRGIPFIKPWEDHELFDK 157 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + ++G D L L+++ G + + ++ + +LK V Sbjct: 158 LQKAEQTGAKIVGMDIDAAGLITLRKM----GRPVAPKTLDALKEIINSTPMKFILKGV- 212 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 ++ + L +++G ++ GG + GI Sbjct: 213 --MTPDEAMLAVEAGADAIVVSNHGGRVLDHTPGAARVLP---------GI--------V 253 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKE 311 + + GG+R G D+LK + LGA + PF + V I+++ E Sbjct: 254 EQVKGKIAILVDGGVRTGGDVLKLVALGADAVMIGRPFSIACVGGLQQGVETYIDTIHGE 313 Query: 312 FIVSMFLLGTKRVQELYLNTALIRHQ 337 +M L GT + A++ Q Sbjct: 314 LKQTMVLTGTASMA--KATPAILNSQ 337 >gi|291224809|ref|XP_002732395.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 443 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 76/350 (21%), Positives = 131/350 (37%), Gaps = 59/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F + + R L ++S S LG+K+ FP+ I+ KM Sbjct: 32 ANLEETLKDNREAFKRYKIRPRVLRDVSHRN--LSTTILGEKIDFPICIAPTA--MQKMA 87 Query: 73 ERINR-NLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFEL-----RQYAPHTVLI 120 A AA K K M + S + V +D N +K F+L R+ V Sbjct: 88 HPDGEIATAKAAAKMKTLMCLSSWATCSFEEVAEADPNGLKWFQLYIYKDREATAQLVRR 147 Query: 121 SN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNG--NTNFADL- 171 + A+ L D + + V L HL N E G +TN + L Sbjct: 148 AEKAGYKAIALTVDTPI-LGRRYADVRNKFQLPPHLSLANFDNEDKHATGVKSTNDSGLA 206 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + L S +P+++K + L++ D L GI ++ G Sbjct: 207 AYVASLIDPSLNWEHVEWLKSITKLPIVVKGI---LTAEDALEALNHGIAGILVSNHGAR 263 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + D+ S++ + + + GG+R G D+LK+I L Sbjct: 264 QLDGVPATIDVLSEV-----------------VQAVNGQVEVYLDGGVRTGTDVLKAIAL 306 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 GA L P L A + + V ++ ++ EF ++M L G V ++ Sbjct: 307 GAKCVFLGRPALWGLAYNGKEGVQQVLQIIKDEFSLAMALSGCCTVSDIK 356 >gi|119496347|ref|XP_001264947.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] gi|119413109|gb|EAW23050.1| mitochondrial cytochrome b2, putative [Neosartorya fischeri NRRL 181] Length = 497 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 122/362 (33%), Gaps = 71/362 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R I + D FLG KL P+ ++ +M G+ I Sbjct: 142 NTEVYRSIILRPRVF--IDCTKCDLDTSFLGHKLGMPIYVAPAAMARLGHPAGEAGI--- 196 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGA 125 A A A Q V + + + +++ ++ I+ L A Sbjct: 197 -AEACRSFGAMQIISNNASMTPEQIVKDAAPDQVFGWQIYVQIDRKKSEAMLARINKLKA 255 Query: 126 VQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE-----------IIQPNGNTN--FA 169 ++ L D V + + + + + QP G FA Sbjct: 256 IKFIVLTLDAPVPGKREDDERGNNVAASMPVPSAAKAADKAADGTPNVSQPGGVGKQLFA 315 Query: 170 D------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L+ D+P++LK + + I ++ ++ GG + Sbjct: 316 GTDPTLTWKDTLPWLAKHTDLPIVLKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALDT 374 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIIL 279 P +L R YC E GG+R G D++K++ L Sbjct: 375 AP------------------PAVHTLLEIRKYCPEVFDKLDVWVDGGIRRGTDVVKALCL 416 Query: 280 GASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIR 335 GA G+ P L D V ++ L E M LLG +RV++L ++NT ++ Sbjct: 417 GAKAVGIGRPALWGLGAGGVDGVKRTLQILADETKTCMRLLGVERVEDLGPQHINTRVVE 476 Query: 336 HQ 337 Q Sbjct: 477 QQ 478 >gi|148234656|ref|NP_001086109.1| hydroxyacid oxidase 2 (long chain) [Xenopus laevis] gi|49257598|gb|AAH74200.1| MGC82107 protein [Xenopus laevis] Length = 356 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 73/346 (21%), Positives = 118/346 (34%), Gaps = 67/346 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + F L R L ++S +D LG+++S P+ I+ T + + Sbjct: 36 DDNLQAFRRIRLRPRMLRDVSV--MDTKTTVLGEEISCPIGIAP-TAFHCLAWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AAE + + V S S + Q AP + L V + Q + Sbjct: 93 ARAAEALNL-LYVASTYATCSVEE------ISQAAPEGLRWFQL-YVYRDRKLSEQLIRR 144 Query: 140 AVHVLGADGLFLHLNP----------------------------------LQEIIQPNGN 165 V LG L L ++ P Sbjct: 145 -VEALGFKALVLTVDVPYTGKRRTDIRNNFRLPPHLKVKNFEGVFEGHSGPDNYGVPVNT 203 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I L S +P+++K + L+ D EL + G++ ++ GG Sbjct: 204 LDPSVSWKDICWLRSVTKLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGGRQLDGEL 260 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D S+I V + GG+R G D+LK+I LGA Sbjct: 261 ATIDALSEIAEV-----------------VQGRIEVYLDGGIRTGSDVLKAIALGAKCVF 303 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P + + V ++ L EF +SM L G + V E+ N Sbjct: 304 LGRPIVWGLTYKGEEGVKGILQILTDEFRLSMALSGCRNVSEVNRN 349 >gi|71896019|ref|NP_001025624.1| hydroxyacid oxidase 2 (long chain) [Xenopus (Silurana) tropicalis] gi|60552675|gb|AAH91092.1| MGC108441 protein [Xenopus (Silurana) tropicalis] Length = 356 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 125/347 (36%), Gaps = 69/347 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 D N + F L R L ++S +D LG+++S P+ I+ T + + Sbjct: 36 DDNLQAFRRIRLRPRMLRDVSV--MDTKTTVLGEEISCPIGIAP-TAFHCLAWPDGEMST 92 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AAE K+ + V S S + + AP + L V + Q + Sbjct: 93 ARAAEALKL-LYVASTYATCSVEE------ISEAAPEGLRWFQL-YVYRDRKLSEQLIRR 144 Query: 140 AVHVLGADGLFLHLNP------------------------LQEIIQPNGNTNFADL---- 171 V LG L L ++ + + + +G + + Sbjct: 145 -VEALGFKALVLTVDVPYTGKRRTDIRNNFRLPPHLKVKNFEGVFEGHGGPDNYGVPLNT 203 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I L S +P+++K + L+ D EL + G++ ++ GG Sbjct: 204 LDPSVSWKDICWLRSVTSLPIVIKGI---LTKEDAELAVVYGVQGIIVSNHGG------- 253 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 R L+ ++ T +L + GG+R G D+LK+I LGA Sbjct: 254 --RQLDGELA---------TIDALAEIVEVVQGRIEVYLDGGIRTGSDVLKAIALGAKCV 302 Query: 285 GLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P + + V ++ L EF +SM L G + V E+ N Sbjct: 303 FLGRPIVWGLTYKGEEGVKGILQILTDEFRLSMALSGCRNVSEVNRN 349 >gi|149733085|ref|XP_001493881.1| PREDICTED: hydroxyacid oxidase (glycolate oxidase) 1 [Equus caballus] Length = 370 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 116/359 (32%), Gaps = 82/359 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + EVD S LG+ +S P+ + + + + Sbjct: 31 ANDEETLADNVAAFSRWKLYPRML--RNVAEVDLSTSVLGQTVSMPICVGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A M + + E+ + P + L + + Sbjct: 86 AHVDGELATVRACRSLGTGMMLSTWATSSIE--------EVAEAGPEALRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQPNGNTNF---- 168 + Q +A +G +F+ ++ P Q + N TN Sbjct: 137 REVTKQLVRRA-ERMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQ-LRMKNFETNDLAFS 194 Query: 169 --------ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + L I L +P++ K + G D +K G Sbjct: 195 PKENFGDNSGLATYVAKAIDPSISWEDIKWLRGLTSLPIVAKGILRG---DDAREAVKHG 251 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + ++ G + + D +I + + GG+ Sbjct: 252 LDGILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEVFLDGGV 294 Query: 268 RNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 295 RKGTDVLKALALGAKAVFVGRPIIWGLASQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|238500638|ref|XP_002381553.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] gi|220691790|gb|EED48137.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] Length = 369 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 109/353 (30%), Gaps = 69/353 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L+ R L V+ + G+ ++FPL +S + + Sbjct: 31 ATGQVTVRENSSAFQKYRLLPRVL--RDVSRVNTEIPLWGRNITFPLCVSPA---GIQAM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA A K V M V S + + L + Sbjct: 86 AHPDGELATSRACAKMNVNMGVSSFSNHSVEDVVAAGMAIGPVHHVMQLY------SMKD 139 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN----------------PLQEIIQPNGNT-------- 166 + + G +FL + P + P N Sbjct: 140 RKTEEGIIRRAEAAGCKAIFLTADSPVLGVRYNEWRNGFQPSPGLGYPMLNRSPEDIAQQ 199 Query: 167 -----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + +I+ L S ++ + +K V L+ D+EL ++ I+ Sbjct: 200 SHDDGFNSFNSDSHSWAKEISWLRSVTNMEIWIKGV---LTPEDVELAVEYKCDGVIISN 256 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + D A+ + GG+R+GVDI K Sbjct: 257 HGGRQLDETPATIDALPAC-----------------AQAARGRIRIHVDGGIRSGVDIFK 299 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA + P L A + V + L ++F M L+G + E+ Sbjct: 300 ALALGAECCWVGRPALWGLAYNGEQGVELMLRILYEDFKRCMQLVGCTSISEI 352 >gi|15229497|ref|NP_188059.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|13124263|sp|Q9LRS0|GLO2_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 1; Short=AtGLO2; Short=GOX 1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 gi|11994211|dbj|BAB01333.1| glycolate oxidase [Arabidopsis thaliana] gi|16604394|gb|AAL24203.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|22531128|gb|AAM97068.1| glycolate oxidase [Arabidopsis thaliana] gi|25083945|gb|AAN72140.1| glycolate oxidase [Arabidopsis thaliana] gi|62320779|dbj|BAD95441.1| glycolate oxidase like protein [Arabidopsis thaliana] gi|332641994|gb|AEE75515.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] gi|332641996|gb|AEE75517.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 367 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 98/376 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I +++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + ++ L AEK Sbjct: 87 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRKVVEQLVRRAEK 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNFEGLDLGK----------MD 192 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + + I L + ++P+L+K V L+ D + Sbjct: 193 EANDSGLA-------SYVAGQIDRTLSW--KDIQWLQTITNMPILVKGV---LTGEDARI 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRVPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSG 342 Query: 321 TKRVQELYLNTALIRH 336 + + E+ N + Sbjct: 343 CRSLSEITRNHIVTEW 358 >gi|225462096|ref|XP_002277249.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086772|emb|CBI32921.3| unnamed protein product [Vitis vinifera] Length = 371 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 124/377 (32%), Gaps = 98/377 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + +N+ F R L I ++D + LG K+S P++I+ Sbjct: 29 AEDQWTLYQNRHAFSQILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTAMQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 87 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRHVVAQLVRRAER 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + Sbjct: 147 AGFKAIALTVDTPRLGRREADIKNRFTL----PPFLTLKNFEGLDLGK----------MD 192 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + + + L + ++P+L+K V L++ D L Sbjct: 193 KADDSGLA-------SYVAGQIDRTLSW--KDVKWLQTITNLPILVKGV---LTAEDTRL 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T ++LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TIMALEEVVKAAQGRVPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR+EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSG 342 Query: 321 TKRVQELYLNTALIRHQ 337 + ++E+ + + + Sbjct: 343 CRSLKEITRDHIVTEWE 359 >gi|50418162|ref|XP_457751.1| DEHA2C01584p [Debaryomyces hansenii CBS767] gi|49653417|emb|CAG85782.1| DEHA2C01584p [Debaryomyces hansenii] Length = 378 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 120/341 (35%), Gaps = 56/341 (16%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNKMIER 74 + NK +D + L R + + EVD S LG ++FPL S G + E Sbjct: 41 NTVRENKSAYDRYSLRPRVM--VDVTEVDTSTTCLGSNVAFPLGFSPSANHGLAHPDAE- 97 Query: 75 INRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFE-----LRQYAPHTVLISN- 122 R + AA K K+ MA+ S V +A S+ ++ +I N Sbjct: 98 --RGTSRAAAKKKINMALSSWTNTSPKVVAEQGKDAGISYAHQLSAVKDQDVTMSIIRNA 155 Query: 123 ----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-------LQEIIQPNGNTNFADL 171 A+ L+ D + + + L + +++ + T + Sbjct: 156 EACGYKAIFLSVDCPL-LGRRLNEMKNTFTLPSNCKFPCYPFIKGGDMVSSDDRTQYETT 214 Query: 172 SSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I L ++ + LK + L+ D E+ + +G ++ GG Sbjct: 215 LTWSYIKELKKKTNMEIWLKGI---LTGEDAEMAVNAGADGIIVSNHGGRQLDGA----- 266 Query: 230 LESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + T +L ++ GG+R G DI K++ LGA + Sbjct: 267 -------------LSTLDALPDVVAAVNGRIPVHIDGGIRRGSDIFKALALGADHCWVGR 313 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 A + V A+ L EF + M L+G V+++ Sbjct: 314 VAVWGLAYKGEEGVSIALNILHDEFRLVMALMGCTSVKDIK 354 >gi|157829941|pdb|1AL7|A Chain A, Three-Dimensional Structures Of Glycolate Oxidase With Bound Active-Site Inhibitors gi|157829942|pdb|1AL8|A Chain A, Three-Dimensional Structure Of Glycolate Oxidase With Bound Active-Site Inhibitors Length = 359 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 60/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I +D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVTNIDMTTTILGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFL--------------HLNPLQEIIQ 161 + A+ L D G ++A + L L + + L + Sbjct: 145 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVA 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +A L + +P+L+K V +++ D L ++ G ++ G Sbjct: 205 GQIDRSLSW--KDVAWLQTITSLPILVKGV---ITAEDARLAVQHGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T ++LE + GG+R G D+ K++ LG Sbjct: 260 DYVPA------------------TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P + A + V ++ +R EF ++M L G + ++E+ + Sbjct: 302 AAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRS 352 >gi|121530|sp|P05414|GOX_SPIOL RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase; AltName: Full=Glycolate oxidase; Short=GOX; AltName: Full=Short chain alpha-hydroxy acid oxidase gi|157831226|pdb|1GOX|A Chain A, Refined Structure Of Spinach Glycolate Oxidase At 2 Angstroms Resolution gi|170113|gb|AAA34030.1| glycolate oxidase (EC 1.1.3.15) [Spinacia oleracea] Length = 369 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 60/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I +D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVTNIDMTTTILGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFL--------------HLNPLQEIIQ 161 + A+ L D G ++A + L L + + L + Sbjct: 145 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVA 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +A L + +P+L+K V +++ D L ++ G ++ G Sbjct: 205 GQIDRSLSW--KDVAWLQTITSLPILVKGV---ITAEDARLAVQHGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T ++LE + GG+R G D+ K++ LG Sbjct: 260 DYVPA------------------TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P + A + V ++ +R EF ++M L G + ++E+ + Sbjct: 302 AAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRS 352 >gi|242046292|ref|XP_002461017.1| hypothetical protein SORBIDRAFT_02g039250 [Sorghum bicolor] gi|241924394|gb|EER97538.1| hypothetical protein SORBIDRAFT_02g039250 [Sorghum bicolor] Length = 342 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 113/346 (32%), Gaps = 72/346 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L I ++D S LG + P++++ G +K+ Sbjct: 32 ADDEYTLRENIAAYGRILLRPRVL--IDVSKIDMSTSLLGYNMPSPIIVAPT--GAHKLA 87 Query: 73 ER-----------------------INRNLAIAAEKTKV-AMAVGSQRVMFSDHNAIKSF 108 ++ L AE A+ + R + A Sbjct: 88 NPEGEVATARAAAACNTIMMCKRRDVSAALVQRAESLGFKALVLTVDRPVLGRREA---- 143 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 ++R ++ G + L+ D + + + L L+ Sbjct: 144 DIRNKMISPRFVNLEGLMSLDKDIDSAEGGSKLERFSRETLDPSLS-------------- 189 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + L S +P+LLK + +++ D +++G+ ++ GG + Sbjct: 190 ---WKDVEWLKSITSLPILLKGI---ITAEDARKAVEAGVSGVILSNHGGRQLDYAPA-- 241 Query: 229 DLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 T +LE + + GG+R G D+LK++ LGA + Sbjct: 242 ----------------TISALEEVVKAVEGSVPVLVDGGIRRGTDVLKALALGAKAVMVG 285 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 P L A IE L KE ++M L G + V E+ Sbjct: 286 RPVLYGLAARGEAGARHVIEMLNKELELAMALCGCRSVAEVTRAHV 331 >gi|122921242|pdb|2NZL|A Chain A, Crystal Structure Of Human Hydroxyacid Oxidase 1 Length = 392 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 116/360 (32%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 53 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 107 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 108 AHVDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 158 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + + QA +G +F+ ++ P Q Sbjct: 159 REVTKKLVRQA-EKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSP 217 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + I L +P++ K + G D +K Sbjct: 218 EENFGDDSGLAAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKH 272 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 273 GLNGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 315 Query: 267 LRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 316 VRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 375 >gi|999542|pdb|1GYL|A Chain A, Involvement Of Tyr24 And Trp108 In Substrate Binding And Substrate Specificity Of Glycolate Oxidase gi|999543|pdb|1GYL|B Chain B, Involvement Of Tyr24 And Trp108 In Substrate Binding And Substrate Specificity Of Glycolate Oxidase Length = 369 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 60/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I +D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVTNIDMTTTILGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFL--------------HLNPLQEIIQ 161 + A+ L D G ++A + L L + + L + Sbjct: 145 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVA 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +A L + +P+L+K V +++ D L ++ G ++ G Sbjct: 205 GQIDRSLSW--KDVAWLQTITSLPILVKGV---ITAEDARLAVQHGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T ++LE + GG+R G D+ K++ LG Sbjct: 260 DYVPA------------------TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P + A + V ++ +R EF ++M L G + ++E+ + Sbjct: 302 AAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRS 352 >gi|41053573|ref|NP_956777.1| hydroxyacid oxidase 2 [Danio rerio] gi|32766675|gb|AAH55205.1| Hydroxyacid oxidase 2 (long chain) [Danio rerio] Length = 357 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 103/330 (31%), Gaps = 72/330 (21%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM--IERINRNLAIAAEKTKVAMAVGSQRV 97 D LG+++SFP+ I+ E A +A + V Sbjct: 54 DVSINDTRTSVLGREISFPVGIAPTAFHCLAWHEGELATARATEALNTCYIASTYATCSV 113 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV-QKAHQAVHVLGADGLFLHLNPL 156 E+ AP+ L L D + ++ V LG L L ++ Sbjct: 114 E----------EIAAAAPNGYRWFQL---YLYRDRKLSEQIVHRVEALGYKALVLTVDVP 160 Query: 157 -----------------------------------QEIIQPNGNTNFADLSSKIALLSSA 181 +E P + + + L S Sbjct: 161 YTGKRRNDIRNQFKLPPHLKVKNFEGMFQEQTEAQEEYGIPANTLDPSISWKDVCWLQSL 220 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+++K + L+ D EL ++ G++ ++ GG + D +I Sbjct: 221 TRLPIIIKGI---LTKEDAELAVEHGVQGIIVSNHGGRQLDGGPATIDCLPEI------- 270 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDA 300 + GG+R G D+LK+I LGA + P A D Sbjct: 271 ----------VDTVQGRVEVYMDGGIRTGNDVLKAIALGARCVFIGRPAIWGLAYKGEDG 320 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V + L EF +SM L G + V E+ N Sbjct: 321 VKEILNILHDEFRLSMVLAGCRNVAEINRN 350 >gi|47221968|emb|CAG08223.1| unnamed protein product [Tetraodon nigroviridis] Length = 367 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 106/328 (32%), Gaps = 58/328 (17%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D G ++SFP+ I+ T + A A E + Sbjct: 54 DVSVSDTRTTIQGTEISFPVGIAP-TAFHCLAWHEGEMATARATEALNTCYITSTYSTCS 112 Query: 100 SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV-QKAHQAVHVLGADGLFLHLNPL-- 156 + E+ AP+ L L D + ++ V LG L L ++ Sbjct: 113 VE-------EIVAAAPNGYRWFQL---YLYRDRKLSEQIVHRVEALGYKALVLTVDVPYT 162 Query: 157 ---------------------------------QEIIQPNGNTNFADLSSKIALLSSAMD 183 +E P + + + L S Sbjct: 163 GKRRNDIRNQFKLPPHLKVKNFDGVFQQEAAVTEEYGIPANTLDPSISWKDVYWLQSITR 222 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++K + L+ D EL ++ G++ ++ GG + + + Sbjct: 223 LPIIIKGI---LTKEDAELAVEHGVQGIIVSNHGGRQLDGGPASLHMPPCFAL------Q 273 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVV 302 LS E+ + GG+R G D+LKS+ LGA + P A + V Sbjct: 274 IDALS-EIVDTVQGRIEVYLDGGIRTGSDVLKSLALGAKCVFIGRPAVWGLAYKGEEGVR 332 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ L EF +SM L G + V E+ N Sbjct: 333 EVLQILNDEFRLSMALSGCRNVAEINRN 360 >gi|268554654|ref|XP_002635314.1| Hypothetical protein CBG01477 [Caenorhabditis briggsae] gi|187038197|emb|CAP22771.1| hypothetical protein CBG_01477 [Caenorhabditis briggsae AF16] Length = 372 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 135/369 (36%), Gaps = 78/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 ++ + RN FD+ + R L S + +D SV +L GK+ ++PL I+ KM Sbjct: 33 AEQETTLRRNVSAFDNLLIRPRCL--RSVESIDTSVTWLNGKRAAYPLGIAPTA--FQKM 88 Query: 72 IERINRNLAI---AAEKTKVAMA-----------------VGS----QRVMFSDHNAIKS 107 + + L+ AA + + VG+ Q ++ D N +S Sbjct: 89 ATK-DGELSTVRGAAASKSIMICSSWSTTSIEEIGKEAKIVGAALWFQLYVYKDRNVTES 147 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-----EIIQP 162 R A + + A+ L D V + L HL + P Sbjct: 148 LIHRAEA------AGVEALVLTVDTPV-LGRRLKDTYNKFSLPHHLKFANFESNTQAEMP 200 Query: 163 NGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 G+T + + + + + +P+++K V G D L L +G Sbjct: 201 KGHTGESGFMQYVSLQIDPSLDWNTLEWIKTKTKLPVIVKGVMRG---DDALLALGAGAD 257 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLR 268 ++ GG I T +L ++ GG+R Sbjct: 258 GIIVSNHGGRQMDSS------------------IATIEALPEVLAAVDKRIPVWMDGGVR 299 Query: 269 NGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 NG DI K++ LGA + P L A S VVA + L+KEF+ SM L G + ++EL Sbjct: 300 NGRDIFKAVALGARGVFVGRPVLWGLATSGSSGVVAVLGILQKEFLHSMQLSGYRSIEEL 359 Query: 328 YLNTALIRH 336 + + H Sbjct: 360 QKDDRAVVH 368 >gi|302883841|ref|XP_003040819.1| hypothetical protein NECHADRAFT_94898 [Nectria haematococca mpVI 77-13-4] gi|256721710|gb|EEU35106.1| hypothetical protein NECHADRAFT_94898 [Nectria haematococca mpVI 77-13-4] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 104/328 (31%), Gaps = 56/328 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD + L R L +D S FLG +++FP S + + +A Sbjct: 39 NEAAFDRYKLRPRNLK--DVSALDTSTTFLGTRVTFPYGFSP---SGQHQLAHPDGEVAT 93 Query: 82 A--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 + A K + M + + + + +++ Sbjct: 94 SKGAAKNNIPMVLSTYTSKSPEDVIAQGTGNPYMMHICFFKDRSKTLEIIKRAEAAGFKA 153 Query: 140 AVHVLGADGLFLHLNPLQEIIQ-----------------------PNGNTNFADLSSKIA 176 + + L L LN E P + + I Sbjct: 154 VIVSVDVAALGLRLN---EYRNNFKLPPGVTNVLIADPTGAQKKRPEWDPSIT-WGDSIK 209 Query: 177 LLSSAMDVPLLLKEVGCG--LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 L + + LK L+ D+ L ++ G+ I+ GG + + Sbjct: 210 WLRQHTKMEIWLKGSKGTLVLTYYDVALAIRHGVDGILISNHGGRQLDGVPA-------- 261 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLGGLASPFLK- 292 T +L P N +A GG+R G DI K++ LGA P L Sbjct: 262 ----------TLDALRECAPVANNKIKLAVDGGIRRGSDIFKALALGADFCLAGRPPLWG 311 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 A + +D V +++ L +EF M L G Sbjct: 312 LAYNGADGVDLSVKILLREFRTCMALCG 339 >gi|322708724|gb|EFZ00301.1| mitochondrial cytochrome b2, putative [Metarhizium anisopliae ARSEF 23] Length = 551 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 110/353 (31%), Gaps = 81/353 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + D L R L + E D S LG K+ P ++ +M + I Sbjct: 201 NNSVYRDILLRPRML--VDCTECDLSTTLLGNKVGVPFFVAPAAMARLAHPDGEHGI--- 255 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA + A+ V S + + AP + VQ D V Sbjct: 256 -AKAAARFN-ALQVISNNASMTPEQIVDG------APSEQMFGWQIYVQNQRDKSVAMLK 307 Query: 139 QAVHV--------------------LGADGLFLHLNPLQEIIQPNGNTNFAD-------- 170 + + L F N +Q + G+ Sbjct: 308 RINAMKDRFKFVCLTLDAPVPGKRELDEKSNFERGNNVQAAVTNGGDAQRPGGGGVGQQL 367 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGT 219 + + L+ D+P++LK + + D L + + ++ GG Sbjct: 368 FFGTACDLTWKTTLPWLAQHTDLPIVLKGIQ---THEDAYLAAQHAPQVKAIILSNHGGR 424 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILK 275 + P +L R YC E + GG+R G D++K Sbjct: 425 AMDTAP------------------PAVHTLLEIRKYCPEIFSKIEVWVDGGIRRGTDVVK 466 Query: 276 SIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA GL L A V +E L E M LLG KR+ EL Sbjct: 467 ALCLGAKAVGLGRAALFGLGAGGQAGVERTLEILEAETATCMRLLGVKRISEL 519 >gi|332206988|ref|XP_003252576.1| PREDICTED: hydroxyacid oxidase 1 [Nomascus leucogenys] Length = 370 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 119/350 (34%), Gaps = 64/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS------QRVMFSDHNAIKS-----FELRQYAPHTVL 119 ++ LA A + M + S + V + A++ ++ R+ V Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEAVRWLQLYIYKDREVTKKLVR 145 Query: 120 ISN---LGAVQLNYDFG-----VQKAHQA------VHVLGADGLFLHLNP---------L 156 + A+ + D + + + + L +P L Sbjct: 146 QAEKTGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGL 205 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + I L +P++ K + G D +K G+ ++ Sbjct: 206 AAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKHGLNGILVSNH 260 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 G + + D+ +I + + GG+R G D+LK+ Sbjct: 261 GARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGGVRKGTDVLKA 303 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + LGA + P A V +E L++EF ++M L G + V+ Sbjct: 304 LALGAKAVFVGRPVVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|134080434|emb|CAK41183.1| unnamed protein product [Aspergillus niger] Length = 508 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 105/342 (30%), Gaps = 52/342 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ + R L I +D + LG K S P I GG Sbjct: 152 AEDEETVKWNRNSWKRIRFCPRVLRPIRT--IDLTTSILGTKYSTPFFICP-AGGAKLAH 208 Query: 73 ERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKS-----FELRQYA---PHTVL 119 + L AA K + V SQ+ + ++ + L + Sbjct: 209 PSGDLALTKAAGKHGILHWVPNNTGYSQKQLADARADTQTLYWQIYALEDLSVTEKEIKQ 268 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE------IIQPNGNTNF----A 169 +LG + + + L +Q P + + Sbjct: 269 AISLGYRAFALTVDANRVGKRERDVRLIIKEEELAGIQADEDNAFASGPTVSRSHIFPDF 328 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + S D L +K G+ ++ GG Sbjct: 329 DWMSAVTWLRKITDLPIAIKGIQ---SWEDAALCMKYGVHP-WLSNHGGRQLEGAP---- 380 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 +L +C E I GG+ G DI+K++ LGA G Sbjct: 381 --------------SAVDTLLAIHTHCPEVFRRCDVIVDGGISRGSDIVKALALGAKGVG 426 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L FL V AI L+ E +M LLG + L Sbjct: 427 LGRAFLYALALGELGVDKAIRILKNEVETTMALLGVSSIDSL 468 >gi|326804180|ref|YP_004321998.1| putative L-lactate oxidase [Aerococcus urinae ACS-120-V-Col10a] gi|326651169|gb|AEA01352.1| putative L-lactate oxidase [Aerococcus urinae ACS-120-V-Col10a] Length = 380 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 115/354 (32%), Gaps = 64/354 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKM 71 + + RN F+ ++ R + + D S FLGK S P + + G Sbjct: 41 AGDEFTLRRNITCFNSKGILPRVIG--DVEHPDTSTSFLGKDYSAPFFYAPIAALGIAHE 98 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + I +A A + A ++ S S S+E + P + + N+ Sbjct: 99 EKEIG--MAKAFNEFGTAFSISSY-AGSSWDEMAPSYEGYEDRPRYFQL----YMSKNHG 151 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFAD------- 170 F ++A G + L + E P A Sbjct: 152 FNEAMLNEAKD-FGCQAIILTADSTVEGNRELNKRNHFTYPFGMPIVERYLAGSGEGMAL 210 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I + S D+P++LK V + D G+ +G ++ GG Sbjct: 211 KDVYASSKQKISPKDIEYIKSICDLPVMLKGVQ---TPEDALKGIGAGADVIYVSNHGGR 267 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 F+ T ++ A+ E + G+R G + K++ Sbjct: 268 QLDGAPG----------SFE-----TLEAI--AQAVQGEVPIVFDSGIRRGEHVFKALAA 310 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + G+ P L A+ V++ + L+ + M L G + ++++ Sbjct: 311 GADVVGIGRPALYGLALGGHKGVLSVLNYLKDDLTRIMQLTGCQTIEDIKNARL 364 >gi|255642603|gb|ACU21609.1| unknown [Glycine max] Length = 348 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 123/376 (32%), Gaps = 98/376 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L + ++D + LG K+S P++I+ Sbjct: 10 AEDQWTLKENRNAFSRILFRPRIL--VDVSKIDLTATVLGFKISMPIMIAPTAMQKMAHP 67 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 68 EGELATARAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVFKDRNVVAQLVRRAER 127 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V S + + + F L P +++ NL + K + Sbjct: 128 AGFKAIALTVDSPILGRREADIKNRFTL----PPNLVLKNL------EGLDLGKLDKTSD 177 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + ++ Q + I L S +P+++K V L++ D + Sbjct: 178 SSLASYVAEQID--QSLNW-----------KDIKWLQSITSLPIVVKGV---LTAEDTRI 221 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T ++LE + + Sbjct: 222 AIQAGAAGIIVSSHGARQLDYVPA------------------TIMALEEVVKAAQGKIPV 263 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGA+ + P + A D V ++ LR EF ++M L G Sbjct: 264 FLDGGIRRGTDVFKALALGAAGVFIGRPVVFSLAADGETGVRKVLQMLRDEFELTMALSG 323 Query: 321 TKRVQELYLNTALIRH 336 + ++E+ + + Sbjct: 324 CRSLKEITRDHVITEW 339 >gi|109092849|ref|XP_001116000.1| PREDICTED: hydroxyacid oxidase 1-like [Macaca mulatta] Length = 370 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 119/350 (34%), Gaps = 64/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNVAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS------QRVMFSDHNAIKS-----FELRQYAPHTVL 119 ++ LA A + M + S + V + A++ ++ R+ V Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVQ 145 Query: 120 ISN---LGAVQLNYDFG-----VQKAHQA------VHVLGADGLFLHLNP---------L 156 + A+ + D + + + + L +P L Sbjct: 146 QAEKTGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGL 205 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + I L +P++ K + G D +K G+ ++ Sbjct: 206 AAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKHGLNGILVSNH 260 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 G + + D+ +I + + GG+R G D+LK+ Sbjct: 261 GARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGGVRKGTDVLKA 303 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + LGA + P A V +E L++EF ++M L G + V+ Sbjct: 304 LALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|11068137|ref|NP_060015.1| hydroxyacid oxidase 1 [Homo sapiens] gi|114680883|ref|XP_001167611.1| PREDICTED: hydroxyacid oxidase 1 [Pan troglodytes] gi|13124294|sp|Q9UJM8|HAOX1_HUMAN RecName: Full=Hydroxyacid oxidase 1; Short=HAOX1; AltName: Full=Glycolate oxidase; Short=GOX gi|266618461|pdb|2W0U|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618462|pdb|2W0U|B Chain B, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618463|pdb|2W0U|C Chain C, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|266618464|pdb|2W0U|D Chain D, Crystal Structure Of Human Glycolate Oxidase In Complex With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]- 1,2,3-Thiadiazole-4-Carboxylate. gi|7208436|gb|AAF40199.1|AF231916_1 short chain 2-hydroxy acid oxidase HAOX1 [Homo sapiens] gi|6012997|emb|CAB57329.1| hypothetical protein [Homo sapiens] gi|7530485|gb|AAF63219.1| glycolate oxidase [Homo sapiens] gi|13276216|emb|CAC34364.1| hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|109730585|gb|AAI13666.1| Hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|109731784|gb|AAI13668.1| Hydroxyacid oxidase (glycolate oxidase) 1 [Homo sapiens] gi|119630784|gb|EAX10379.1| hydroxyacid oxidase (glycolate oxidase) 1, isoform CRA_a [Homo sapiens] gi|119630785|gb|EAX10380.1| hydroxyacid oxidase (glycolate oxidase) 1, isoform CRA_a [Homo sapiens] gi|158259869|dbj|BAF82112.1| unnamed protein product [Homo sapiens] gi|189054064|dbj|BAG36571.1| unnamed protein product [Homo sapiens] gi|313882960|gb|ADR82966.1| hydroxyacid oxidase (glycolate oxidase) 1 [synthetic construct] Length = 370 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 116/360 (32%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + + QA +G +F+ ++ P Q Sbjct: 137 REVTKKLVRQA-EKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSP 195 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + I L +P++ K + G D +K Sbjct: 196 EENFGDDSGLAAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 251 GLNGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 294 VRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|254456037|ref|ZP_05069466.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] gi|207083039|gb|EDZ60465.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] Length = 383 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 113/375 (30%), Gaps = 74/375 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN FDD L+ L + VD S GKKL P ++ Sbjct: 32 ADDEITYARNTSAFDDVDLVPNVLRG--VENVDLSTTIFGKKLDLPFYLAPTALQRLFHY 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ--------RVMFSDHNAIKSF--ELRQYAPHTVLISN 122 + R + AA+K V + M + + + R + + Sbjct: 90 DG-ERAVGKAAKKFNTMFGVSALATVSVEEISSMIDTPKMFQFYFHKDRGLNDSCLERAK 148 Query: 123 LGAVQL-----------NYDFGVQKAHQAVHVLGADGLF-----------------LHLN 154 + N + ++ + L LF L Sbjct: 149 AAKFDVMALTVDTITGGNRERDLRTGFTSPPKLTLSSLFSFATKPMWGINYLTKGKFELP 208 Query: 155 PLQEIIQPNGNTN------FADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 LQ+ ++ +TN F+ + + L S LK V +S D + Sbjct: 209 HLQDYVKEGTDTNTSIGNYFSTMLDQSMNWKDAEKLCSQWGGHFALKGV---MSVEDAKR 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G ++ GG S D ++I ++ I Sbjct: 266 AVDIGCTGIMVSNHGGRQLDGSRSPFDQLAEI-----------------VDAVGDKLDVI 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGT 321 GG+ G +LK++ LGA +L A V AIE + E + M L+G Sbjct: 309 CEGGIHRGTHMLKALSLGAKACSGGRLYLYALAAGGQAGVERAIEKYKTELVRDMKLMGC 368 Query: 322 KRVQELYLNTALIRH 336 ++ +L N R Sbjct: 369 TKISDLNRNNLRFRR 383 >gi|27549566|gb|AAO17067.1| glycolate oxidase [Zantedeschia aethiopica] Length = 367 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 117/358 (32%), Gaps = 62/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLKENRNAFSRILFRPRIL--IDVTKIDMTTTVLGYKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HLDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------------NP--LQEII 160 + A+ L D + + + L HL N L + Sbjct: 145 ERAGFKAIALTVDTP-RLGRRESDIKNRFTLPPHLTLKNFEGLDLGKMDKSNDSGLASYV 203 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + + L + +P+L+K V +++ D L +++G ++ G Sbjct: 204 AGQIDRSLSW--KDVKWLQTITSMPILVKGV---MTAEDTRLAVQAGAAGIIVSNHGARQ 258 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T LE + GG+R G D+ K++ L Sbjct: 259 LDYVPA------------------TISCLEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 GAS + P + A + V ++ LR+EF ++M L G ++++ N L Sbjct: 301 GASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCLSLKDITRNHILTEG 358 >gi|255956049|ref|XP_002568777.1| Pc21g17810 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590488|emb|CAP96678.1| Pc21g17810 [Penicillium chrysogenum Wisconsin 54-1255] Length = 455 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 127/357 (35%), Gaps = 68/357 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINR 77 +N + F L + + E D + + L +S P+ +S +M G+ I Sbjct: 108 KNTEVFRSIQLRPKVF--VDCTECDLNTKLLDDHVSIPIYVSPAAMARLGHPSGEAGI-- 163 Query: 78 NLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN--- 122 A A A Q V + I ++L R + + N Sbjct: 164 --AEACRSFGALQIISNSASMPPEQIVAGAAPGQIFGWQLYVQNDRTKSERMLARINKLS 221 Query: 123 -LGAVQLNYDFGV----QKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFAD------ 170 + + L D V + ++ +V+G++ N IIQ + F Sbjct: 222 AIKFITLTLDSPVTGKREDDERSGNVIGSEAPYQSDSNDTGPIIQTE-DPVFKGMDPSLT 280 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS--GIRYFDIAGRGGTSWSRIESHR 228 + + L+ ++P++LK + + D + + ++ ++ GG S Sbjct: 281 WAETLKWLAKHTELPIVLKGIQ---THEDAYIATQYTPQVKGIILSNHGGRSLDTAR--- 334 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLG 284 P ++ R YC E + GG++ G D++K++ LGA Sbjct: 335 ---------------PAVHTMLEIRKYCPEVFDKIEVWVDGGIKRGTDVVKALCLGARGV 379 Query: 285 GLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ L D V ++ L +E M LLG K + EL ++NT L+ Q Sbjct: 380 GIGRAALWGLGAGGVDGVKRTLQILTEETKTCMRLLGAKNIDELGKQHINTRLVEKQ 436 >gi|297706329|ref|XP_002829994.1| PREDICTED: hydroxyacid oxidase 1-like [Pongo abelii] Length = 370 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 120/350 (34%), Gaps = 64/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS------QRVMFSDHNAIKS-----FELRQYAPHTVL 119 ++ LA A + M + S + V + A++ ++ R+ V Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVR 145 Query: 120 ISN---LGAVQLNYDFG-----VQKAHQA------VHVLGADGLFLHLNP---------L 156 + A+ + D + + + + L +P L Sbjct: 146 QAEKTGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGL 205 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + I L +P++ K + G D + +K G+ ++ Sbjct: 206 AAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAKEAVKHGLNGILVSNH 260 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 G + + D+ +I + + GG+R G D+LK+ Sbjct: 261 GARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGGVRKGTDVLKA 303 Query: 277 IILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + LGA + P A V +E L++EF ++M L G + V+ Sbjct: 304 LALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 353 >gi|164600806|gb|ABY61829.1| hemoglobin/glycolate oxidase fusion protein [synthetic construct] Length = 525 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 60/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I +D + LG K+S P++I+ KM Sbjct: 185 AEDQWTLAENRNAFSRILFRPRIL--IDVTNIDMTTTILGFKISMPIMIAPTA--MQKMA 240 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 241 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 300 Query: 120 -ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFL--------------HLNPLQEIIQ 161 + A+ L D G ++A + L L + + L + Sbjct: 301 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVA 360 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +A L + +P+L+K V +++ D L ++ G ++ G Sbjct: 361 GQIDRSLSW--KDVAWLQTITSLPILVKGV---ITAEDARLAVQHGAAGIIVSNHGARQL 415 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T ++LE + GG+R G D+ K++ LG Sbjct: 416 DYVPA------------------TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 457 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P + A + V ++ +R EF ++M L G + ++E+ + Sbjct: 458 AAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRS 508 >gi|168988712|pdb|2RDT|A Chain A, Crystal Structure Of Human Glycolate Oxidase (Go) In Complex With Cdst gi|168988713|pdb|2RDU|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With Glyoxylate gi|168988714|pdb|2RDW|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex With Sulfate Length = 387 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 116/360 (32%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 48 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 102 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 103 AHVDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 153 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + + QA +G +F+ ++ P Q Sbjct: 154 REVTKKLVRQA-EKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSP 212 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + I L +P++ K + G D +K Sbjct: 213 EENFGDDSGLAAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKH 267 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 268 GLNGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 310 Query: 267 LRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E L++EF ++M L G + V+ Sbjct: 311 VRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVK 370 >gi|317033969|ref|XP_001395710.2| oxidoreductase [Aspergillus niger CBS 513.88] Length = 460 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 105/342 (30%), Gaps = 52/342 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ + R L I +D + LG K S P I GG Sbjct: 135 AEDEETVKWNRNSWKRIRFCPRVLRPIRT--IDLTTSILGTKYSTPFFICP-AGGAKLAH 191 Query: 73 ERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKS-----FELRQYA---PHTVL 119 + L AA K + V SQ+ + ++ + L + Sbjct: 192 PSGDLALTKAAGKHGILHWVPNNTGYSQKQLADARADTQTLYWQIYALEDLSVTEKEIKQ 251 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE------IIQPNGNTNF----A 169 +LG + + + L +Q P + + Sbjct: 252 AISLGYRAFALTVDANRVGKRERDVRLIIKEEELAGIQADEDNAFASGPTVSRSHIFPDF 311 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D S + L D+P+ +K + S D L +K G+ ++ GG Sbjct: 312 DWMSAVTWLRKITDLPIAIKGIQ---SWEDAALCMKYGVHP-WLSNHGGRQLEGAP---- 363 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 +L +C E I GG+ G DI+K++ LGA G Sbjct: 364 --------------SAVDTLLAIHTHCPEVFRRCDVIVDGGISRGSDIVKALALGAKGVG 409 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L FL V AI L+ E +M LLG + L Sbjct: 410 LGRAFLYALALGELGVDKAIRILKNEVETTMALLGVSSIDSL 451 >gi|260791285|ref|XP_002590670.1| hypothetical protein BRAFLDRAFT_125550 [Branchiostoma floridae] gi|229275866|gb|EEN46681.1| hypothetical protein BRAFLDRAFT_125550 [Branchiostoma floridae] Length = 1115 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 112/336 (33%), Gaps = 54/336 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N + F + LI R L ++S D SV LG KL P+ I+ Sbjct: 32 AGTGQTYQDNLEAFRRYRLIPRNLRDVSIR--DTSVTVLGTKLDIPVAIAPTA---IHRF 86 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRV-MFSD-----HNAIKSFELRQYAPHTVLISNL- 123 + LA A A M + S + + F + + + L Sbjct: 87 AHPDAELATAKGAAAMNTGMVLSSWSTRSLEEVAEAAPGGVHWFYMLFFNDRGYVKRQLE 146 Query: 124 -------GAVQLNYDFGVQKAHQAVHVLGADGL----FLHLNPLQ-----EIIQP--NGN 165 A+ L D + A + +P E Q Sbjct: 147 RAERAGYSAIFLTIDQPLFPKPGASPRSYPFTVRFPNIFETDPPHAFGTAEYRQSLLELV 206 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 +A + + + +P++LK V LS D ++ + G++ ++ GG + Sbjct: 207 KEYATWED-VEWVVANTRLPVVLKGV---LSGEDAKMAVDRGVKGIYVSNHGGRELDGVP 262 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D+ I R +A+ GG+R G D+LK++ LGA Sbjct: 263 ATIDVLPHI-----------------VRAVDGKAEVYLDGGVRTGTDVLKALALGARCVF 305 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + P L A + ++ V ++ L +E +M G Sbjct: 306 IGRPALWGLAHNGAEGVQQVLQILTEELSQAMARAG 341 >gi|83773777|dbj|BAE63902.1| unnamed protein product [Aspergillus oryzae] Length = 513 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 121/353 (34%), Gaps = 74/353 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ + R L I D +D S LG K + P I GG Sbjct: 145 DEHAAKWNRDSWKTIRFRPRVLRPI--DGIDISRCILGTKFAAPFFICP-AGGA------ 195 Query: 75 INRNLAIAAEKTKVAMAVGSQRV---MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 LA + MA G + + ++ + + AP + A + D Sbjct: 196 ---KLAHPQADLCLTMAAGRHHILHWVCNNSHMSQKDMSDARAPDQTTFWQIYARS-DLD 251 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-----------------QEIIQ------------- 161 Q+ QA++ LG G L ++ + Q+ I+ Sbjct: 252 TTTQEVKQAIN-LGYKGFALTVDAVRAGKRERDLRVTLAQREQDGIRVNDDDEEDDNFAR 310 Query: 162 ------PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + F D S + L D+P+ +K + C D L ++ G ++ Sbjct: 311 EPSVGRPAVHPGF-DWVSAMKWLRGMTDLPIAIKGIQC---WEDAVLCMEYGAHP-WLSN 365 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDIL 274 GG S + T +S+ ++ + I GG+ G DI+ Sbjct: 366 HGGRQLDSAPSAVE---------------TLVSIRQHCPEVFDKCEVIVDGGITRGSDIV 410 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA GL PFL A V AI L+ E +M LLG + +L Sbjct: 411 KALALGAKGVGLGRPFLYSAAFGGAGVSKAIRILKNEVETTMALLGITSLNQL 463 >gi|258569831|ref|XP_002543719.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237903989|gb|EEP78390.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 480 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 121/346 (34%), Gaps = 66/346 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R I + D + LG KLS P+ +S ++ + +A Sbjct: 129 NNTVYRSILLRPRVF--IDCRKCDLTTTLLGHKLSSPVYVSPAA--MARLAHPVGEAGIA 184 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A + A + V + + + ++L R+ I L A++ Sbjct: 185 AACSEFGTMQIISNNASMTPEEIVKNATPDQVFGWQLYVQTEKRKSEAMLARIKKLKAIK 244 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-------------- 170 L D V + L+ + ++++ G ++ + Sbjct: 245 FICLTLDAPVPTKREDDERTKY---ILNTDDTSDMLRNAGASSISTRGGGIGEQLFGGTD 301 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + L+ D+P++LK + + + ++ ++ GG S Sbjct: 302 ASLTWKTTLPWLAKHTDLPIILKGIQTHEDAY-VASLHAPQVKGIILSNHGGRSMDTAP- 359 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGAS 282 P +L R +C E + GG+R G D++K++ LGA Sbjct: 360 -----------------PAIHTLLEIRKFCPEVFDSLEVWVDGGIRRGTDVVKALCLGAK 402 Query: 283 LGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ L +D V ++ L++E +M LLG ++V++L Sbjct: 403 AVGIGRAALFGLGAGGTDGVKRVLQILKQETKTAMRLLGVEKVEDL 448 >gi|326496509|dbj|BAJ94716.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 369 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 119/354 (33%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N++ F R L I ++ + LG +S P++I+ + + Sbjct: 32 AEDQWTLNENREAFSRILFRPRVL--IDVSHINMATSILGFDVSMPIMIAPTA---MQKM 86 Query: 73 ERINRNLAIAAEKTKVA-------MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ 119 LA A A S + S I+ F+L Y ++ Sbjct: 87 AHPEGELATARAAASAGTIMTLSSWATSSVERVNSVGPGIRFFQLYVYKDRNIVRQLVKR 146 Query: 120 --ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNGNTNFADL--- 171 ++ A+ L D + + + L HL N + T+ + L Sbjct: 147 AEMAGFKAIALTVDTP-RLGRREADIKNRFILPPHLVLENFAALDLGKMDKTDDSGLASY 205 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + L + +P+L+K V +++ D + ++ G ++ G Sbjct: 206 VASQVDQSLCWEDVKWLQTITSLPILVKGV---MTAEDTRIAIEYGAAGIIVSNHGARQL 262 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T LE R GG+R G D+ K++ LG Sbjct: 263 DYVPA------------------TISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALG 304 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ + P L A+D V ++ LR E ++M L G ++++ + Sbjct: 305 AAGVFIGRPVLYSLAVDGEAGVRKVLQMLRDELELAMALSGCASLRDITRAHVV 358 >gi|147789144|emb|CAN60339.1| hypothetical protein VITISV_031318 [Vitis vinifera] Length = 364 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 109/348 (31%), Gaps = 53/348 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F R L + ++D S LG +S P++I+ +K+ Sbjct: 31 AEDQHTLRENVEAFSRITFQPRIL--VDVSKIDMSTTVLGFNISSPIMIAPTA--MHKLA 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + V S + S F+ R + V + Sbjct: 87 HPEGEIATARAAAACNTIMVLSFMSTCTVEEVASSCNAVRFLQLYVFKRRDVSAQLVQRA 146 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN--------------GNT 166 G + + + + + L + +I G Sbjct: 147 ERNGFKAIVLTADTPRLGRREADIKNRMVSPRLKNFEGLISTEVVTDKGSNIEALASGMF 206 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + I L S ++P+L+K V L+ D ++ G+ ++ G + + Sbjct: 207 DASLSWKDIEWLRSITNLPILIKGV---LTCEDAIKAVEVGVSGIIVSNHGARQLDYVPA 263 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 T +LE + + GG+R G DI K++ LGA Sbjct: 264 ------------------TISALEEVVLAVGGKVPVLFDGGIRRGTDIFKALALGAQAVF 305 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A V IE L+ E ++M L G V+++ Sbjct: 306 IGRPVIYGLAAKGKHGVRRVIEMLKDELEITMALSGCSSVKDISRRHV 353 >gi|242766314|ref|XP_002341146.1| mitochondrial cytochrome b2-like, putative [Talaromyces stipitatus ATCC 10500] gi|218724342|gb|EED23759.1| mitochondrial cytochrome b2-like, putative [Talaromyces stipitatus ATCC 10500] Length = 495 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 114/348 (32%), Gaps = 77/348 (22%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R + + VD +G + S PL +S M + I Sbjct: 145 DANKSCFDRIWFRPRIM--RNVRSVDTRTSIMGVESSLPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 R +A A + + V S +S ++ AP+ L V + + Sbjct: 198 ERAIAKACYEKGILQGV-SNNSSYSIEELAET------APNGKFFFQL-YVSPDREKSAS 249 Query: 136 KAHQAVHVLGADGLFLHLN---------------------PLQEIIQPN----------- 163 + + + + ++ P+ + N Sbjct: 250 LIRKVSSLPQFKAIHITVDAAWPGKREADERVKVDESTSVPMSDAKAKNDKKGGGIGRLM 309 Query: 164 -GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G+ + A IA + +P+ LK + +S+ D L +K+G+ ++ GG + Sbjct: 310 AGHIDPALTWDDIAFVRRHTHLPICLKGI---MSADDAILAMKAGVDGILLSNHGGRNLD 366 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P+ ++L + E + G+R G D LK++ Sbjct: 367 TSP------------------PSIITLLELQRRAPEVFDCMEVYVDSGIRRGTDTLKAVA 408 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA+ G+ L + V I+ +R E +M G + E Sbjct: 409 LGATAVGMGRSMLFATNYGQEGVEHLIDIMRDELETAMRNNGITSLDE 456 >gi|296412260|ref|XP_002835843.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629638|emb|CAZ80000.1| unnamed protein product [Tuber melanosporum] Length = 388 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 111/329 (33%), Gaps = 47/329 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + R+ + F L R L I + + G K + P I+ G Sbjct: 73 AAGEFAYRRSLEIFSQVKLRPRTL--IDVTNISLNTTIFGHKFTAPFFIAPAARAGLTHP 130 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA----PHTVLISNLGAVQ 127 +N LA AA + + + ++ + A P V+ L V Sbjct: 131 RAELN--LAEAAGAENI----------LYAPSLSATKKIEEIAAVAVPGQVMFHQL-YVS 177 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPNGNTNFADL--------SSKIALL 178 N + + G G+F+ + NP+ + + L Sbjct: 178 RNKTKLASDVKR-IEAAGFKGIFVTVDNPVHGVRTRESRYGWPSTTDSDPEFTWESYQAL 236 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + +P++ K + S D L +K G ++ G +S ++ +I Sbjct: 237 RNMTSLPVIPKGIQ---SVEDALLAIKHGAPGIYLSNHGARQLDTSQSPLEVAIEIH--- 290 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 E A +E A GG+R G DILK + LG GL PF+ + Sbjct: 291 -----------ENAPEVFSETFVFADGGVRYGTDILKLLALGVKAVGLGRPFMYSNVFGR 339 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V I+ L++E V LG +++L Sbjct: 340 EGVQYLIDLLKEELTVDASNLGVADLKQL 368 >gi|291389051|ref|XP_002711026.1| PREDICTED: hydroxyacid oxidase 1 [Oryctolagus cuniculus] Length = 370 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 114/360 (31%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + E+D S LG+++S P+ + + + Sbjct: 31 ANDQETLADNVAAFSRWKLYPRML--RNAAEIDLSTSVLGQRISMPICAGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA A + M + S E+ + P + L + + Sbjct: 86 AHEDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPDALRWMQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + Q +A + +F+ ++ P Q Sbjct: 137 REVTKQLVRRA-EQMDYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRLKNFETNDLAFSP 195 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + I L +P++ K + G D + +K Sbjct: 196 KENFGDTNGLAAYVAKAIDPSISW--EDIKWLRGLTSLPIVAKGILRG---DDAKEAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 251 GLDGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V +E LR+EF ++M L G + VQ Sbjct: 294 VRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEQGVQDVLEILREEFRLAMALSGCQNVQ 353 >gi|325088797|gb|EGC42107.1| cytochrome b2 [Ajellomyces capsulatus H88] Length = 475 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 113/332 (34%), Gaps = 58/332 (17%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD L R L + E + + LG ++ PL +S M++ I + Sbjct: 148 DANKSFFDRTWLRPRVL--RNVKEANTKTKILGCDVNMPLFVSPAA-----MVKLIHPDG 200 Query: 78 NLA--IAAEKTKVAMAVG-SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 LA A E + + S D A P L V + Sbjct: 201 ELAVARACESRGIMHGISNSASYPMKDITAAG--------PRANYFFQL-YVNKDRAKSA 251 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEV 191 + + A N + F D + +PL+LK V Sbjct: 252 AQLRECSENPSAQ------NDSKGGGLGRVMGGFIDPALTWEDLVWARKHTHLPLVLKGV 305 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 +S+ D L +K+G+ ++ GG + P ++L Sbjct: 306 ---MSADDAILAMKAGLDGILLSNHGGRNLDTSP------------------PALVTLLE 344 Query: 252 ARPYCNEAQ----FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 C E GG+R G DILK++ LGA+ G+ L A + V + Sbjct: 345 LHKRCPEIFDKMGIYVDGGIRRGTDILKAVCLGATAVGMGRSVLFAAAYGQEGVEHLFDI 404 Query: 308 LRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + E +M L+G + + + +NTA I H Sbjct: 405 MADELEGAMRLVGITSLDQAHPGLVNTADIDH 436 >gi|58262842|ref|XP_568831.1| L-lactate dehydrogenase (cytochrome) [Cryptococcus neoformans var. neoformans JEC21] gi|134108458|ref|XP_777180.1| hypothetical protein CNBB4110 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259865|gb|EAL22533.1| hypothetical protein CNBB4110 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223481|gb|AAW41524.1| L-lactate dehydrogenase (cytochrome), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 592 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 124/367 (33%), Gaps = 53/367 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + H R L + + D S LG K + P++IS K+ Sbjct: 234 ADDEFTKNENNTSYQKIHFRPRVLRK--VAQADASTTILGYKSTLPVMISPAA--MAKLG 289 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSDHNAIKS------FELRQYAPHTVLISNLG 124 + N+ A T + + S + A +S F+L + + L Sbjct: 290 HPLGEVNMTRGAANTGIIQCISSFASCSLEEICAARSENQPLFFQLYVNSKRDLAAEVLK 349 Query: 125 AVQ-LNYDFGVQKAHQAVHVLGADGLFLHLNP----------------LQEIIQPNGNTN 167 V LN + + AV L L N + E + + + Sbjct: 350 RVNRLNLNAILLTVDAAVGGKRERDLRLKGNFEPPKTGAYEKHDDTKGVSEAMFAGVDPD 409 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 I + S +PLL+K V + D L + G ++ GG + Sbjct: 410 LCW--DDIKWIRSQTKLPLLIKGVQ---TVEDAILAYRMGADGVVLSNHGGRQLDTTHTG 464 Query: 228 RDLESDI---GIVFQ--DWGIPT---PLSLE----------MARPYCNEAQFIASGGLRN 269 D +I ++ PT P +LE +P + GG+ Sbjct: 465 IDTLLEIRKHAPYLLRPEYRGPTGVQPAALEHPENLTPPDPQEKPTDRPFEIWVDGGIWR 524 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D +K++ LGA+ G FL A+ V A+ E + +M LLG +V +L Sbjct: 525 GSDAVKALCLGANAVGSGRGFLFANAVGGQKGVEHAVNIFSAEILTTMRLLGVNKVDQLR 584 Query: 329 LNTALIR 335 + I+ Sbjct: 585 PSMVEIK 591 >gi|147770035|emb|CAN74334.1| hypothetical protein VITISV_021217 [Vitis vinifera] Length = 372 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 120/373 (32%), Gaps = 98/373 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++I+ Sbjct: 32 AEDQWTLRENRNAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTAFQKMAHP 89 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 90 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRHVVAQLVRRAER 149 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + Sbjct: 150 AGFKAIALTVDTPRLGRREDDIKNRFTL----PPFLTLKNFEGLDLGK----------MD 195 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + + + + L + +P+L+K V L++ D + Sbjct: 196 KADDSGLA-------SYVAGQIDRSLSW--KDVKWLQTITKLPILVKGV---LTAEDARI 243 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQF 261 + G ++ G + + T ++LE + Sbjct: 244 AVNVGAAGIIVSNHGARQLDYVPA------------------TIMALEEVVKATQGRIPV 285 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A D V A++ LR EF ++M L G Sbjct: 286 FLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAADGEAGVRKALQMLRDEFELTMALSG 345 Query: 321 TKRVQELYLNTAL 333 + ++E+ N + Sbjct: 346 CRSLKEIXRNHIM 358 >gi|226324008|ref|ZP_03799526.1| hypothetical protein COPCOM_01785 [Coprococcus comes ATCC 27758] gi|225207557|gb|EEG89911.1| hypothetical protein COPCOM_01785 [Coprococcus comes ATCC 27758] Length = 341 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 111/322 (34%), Gaps = 46/322 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN K + + + + E D SV GK+ P + N +R Sbjct: 47 RNYKKWQEIRVNMDTI--CDGGEADTSVNLFGKEFKMPFFAGPVGAVNLHYSDRYDDVSY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A +A G + + + +R+ + V+ V+ Sbjct: 105 NNVLVSACADAGIAAFTGD--GVNAKVMEAATEAIRENTGCG-----IPTVKPWNLDTVR 157 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + V GA + + ++ L+ + P G+ N +++ + P ++K Sbjct: 158 EKMELVKKSGAFAVAMDIDAAGLPFLKNMNPPAGSKN----VQELSEIVKMAGRPFIVKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 V +++ ++G ++ GG + + T LE Sbjct: 214 V---MTAKGARKAKEAGADAIIVSNHGGRVLDQCPA------------------TAEVLE 252 Query: 251 M-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESL 308 + + + GG+R+G DI K++ LGA + PF+ + V I+ L Sbjct: 253 EIVKEVNGSMKILVDGGIRSGTDIFKALALGADGVLICRPFVVAVYGGGEEGVKLYIDKL 312 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 E +M + G V E+ + Sbjct: 313 GAELKDAMQMCGAHSVSEITRD 334 >gi|302919450|ref|XP_003052866.1| hypothetical protein NECHADRAFT_35680 [Nectria haematococca mpVI 77-13-4] gi|256733806|gb|EEU47153.1| hypothetical protein NECHADRAFT_35680 [Nectria haematococca mpVI 77-13-4] Length = 485 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 107/339 (31%), Gaps = 53/339 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + D N+ L R + + +V + G +L P+ IS TG Sbjct: 135 DNDTRDANRSILRRILLRPRVM--RNVRDVKTNTTLFGCELDIPVYISP-TGAAKTGGAE 191 Query: 75 INRNLAIAAEKTKV--AMAVGSQRVM--FSDHNAIKSFELRQYAPH----------TVLI 120 LA A + A S D ++F Sbjct: 192 GELTLARGAAAGGIVHCFATPSSYPHDEILDETPRQAFFQLYVNKDRKKSEAAIRQMDAS 251 Query: 121 SNLGAVQLNYDFGV---QKAHQAVHVLGADGLFLHLNPLQE--------IIQPNGNTNFA 169 + A+ + D V ++A + + + + ++ Q + + Sbjct: 252 GKIKAIFVTVDVPVVPKREADERIRSNETVSIGGTKSDVKGGDKKGAGLARQTGAFIDPS 311 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I+ L S +P+L+K + ++ D + + G I+ GG + Sbjct: 312 VDWGIISWLRSLTSLPILVKGIQ---TAHDARMAHRYGCDGIVISNHGGRAVDHAP---- 364 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 P L L + C E + + GG R G D++K+I LGAS G Sbjct: 365 --------------PAILILLELQKNCPEVLESMEVLIDGGFRRGADVVKAICLGASAVG 410 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 + FL V AI LR E +M L G + Sbjct: 411 IGRSFLYSLSYGQQGVEHAISILRDEIETTMRLCGMTDL 449 >gi|238495746|ref|XP_002379109.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] gi|220695759|gb|EED52102.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] Length = 454 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 111/330 (33%), Gaps = 65/330 (19%) Query: 32 IHRAL---PEISFD--EVDPSVEFLGKKLSFPLLISSMT---GGNNKMIERINRNLAIAA 83 ++R+L P + D + D E LG K+ P+ +S G+ + I A A Sbjct: 140 VYRSLLLRPRVFVDCRKCDVETELLGWKVGLPIYVSPTAMARLGHPRGEAGI----AEAC 195 Query: 84 EKTKVAMAVGSQRVMFSD-------HNAIKSFEL-----RQYAPHTVLISN----LGAVQ 127 + S + + + ++L R+ + + N + V Sbjct: 196 GAFGALQIIASNSSLSPEQVVAKALPTQVFGWQLYVQLDRRASEAMLARVNRLDEIKFVI 255 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQPNGNTNFADLSSKIALLSSAMDV 184 L D V + + NP + + + + + + LS Sbjct: 256 LTLDAPVSGKREDDERINVKS-----NPAGSVSAQLFAGTDPSLT-WNETLEWLSRHTKK 309 Query: 185 PLLLKEVGCGLSSMDIELGLKSGI--RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P++LK + + D+ + + + ++ GG S Sbjct: 310 PIILKGLQ---THEDVAIAARYTPLVQAVILSNHGGRSLDTAP----------------- 349 Query: 243 IPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 P +L A+ YC + + GG+R G D++K++ LGA G+ P L Sbjct: 350 -PAVHTLLEAQKYCPHVFKKMEVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLGAGG 408 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ L E M LLG V +L Sbjct: 409 VKGVERTLQILLDETKTCMRLLGATTVHDL 438 >gi|300782823|ref|YP_003763114.1| (S)-2-hydroxy-acid oxidase [Amycolatopsis mediterranei U32] gi|299792337|gb|ADJ42712.1| (S)-2-hydroxy-acid oxidase [Amycolatopsis mediterranei U32] Length = 356 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 119/354 (33%), Gaps = 70/354 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F D L+ R L D+ D S+E LG S P+L++ + Sbjct: 27 AQDEITLRENETAFQDLRLVPRVLRGS--DKRDLSIELLGTPSSMPILVAPTA---FHRL 81 Query: 73 ERINRNLAIAAEKT---KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA A + + + D A R+ AP L L +Q + Sbjct: 82 AHSDGELATARAAARAGTIMIVSMAATTAVEDIAAAA----REVAPDPALWFQL-YLQPD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-FADL----------------- 171 +F +A G + ++ + + N F DL Sbjct: 137 LEFTEAIVRRA-EAAGVKAFVVTVDSPVLGRRERDDRNAFHDLPPGLVVENLRNLGENRS 195 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 IA L S +P+L+K V L + D L + G+ ++ Sbjct: 196 GGNASHVREIVMSAGLSWDHIAWLRSKTKLPVLIKGV---LHAEDARLAVHHGVAGIVVS 252 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + + ++ +I + GG+R G D++ Sbjct: 253 NHGGRQLDTVPATIEVLPEIAA-----------------AVGGAIPVLLDGGIRRGTDVV 295 Query: 275 KSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA G+ P A + V ++ LR +F ++ L G + +L Sbjct: 296 KALALGADAVGVGRPIVWGLAAGGREGVSEVLDLLRDDFDQALALCGGRHPADL 349 >gi|225621423|ref|YP_002722682.1| FMN-dependent alpha-hydroxyacid oxidizing protein [Brachyspira hyodysenteriae WA1] gi|225216244|gb|ACN84978.1| FMN-dependent alpha-hydroxyacid oxidizing enzyme [Brachyspira hyodysenteriae WA1] Length = 337 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 111/320 (34%), Gaps = 42/320 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERI 75 RN + + L + S +++D S E GKK +P+ + GN E Sbjct: 46 RNYDKWREIRLNMDTI--CSNEDIDTSFELFGKKFKYPIFAGPVGAVQLHYGNKYTEEEY 103 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L + + +A G + + A + N V + + Sbjct: 104 NDILVKSCAEAGIAAFTGD----------GVNANVMIAATTMIKKQNGIGVPTVKPWNID 153 Query: 136 KAHQ---AVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSKIALLSSAMDVPLLLKEV 191 + V A + + ++ N + ++ + P ++K + Sbjct: 154 VIKEKMKLVADSNAFAVAMDVDAAGLPFLKNLTPKAGSKTVDELKQIKEIAKRPFIIKGI 213 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 +++ + +++G ++ GG + + ++ +I Sbjct: 214 ---MTAKGAKKAVEAGADAIIVSNHGGRVLDQCPATAEVLPEIAD--------------- 255 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRK 310 + + + GG+RNG DILK+I LGA +A F+ A + V + + L Sbjct: 256 --AVKGKIKILVDGGIRNGTDILKAIALGADGVVIARTFVIAAYGGGEEGVKSYADQLGA 313 Query: 311 EFIVSMFLLGTKRVQELYLN 330 E +M + G ++E+ + Sbjct: 314 ELEDAMTMCGVHSLKEITRD 333 >gi|238500952|ref|XP_002381710.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] gi|220691947|gb|EED48294.1| oxidoreductase, putative [Aspergillus flavus NRRL3357] Length = 457 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 125/361 (34%), Gaps = 76/361 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ + R L I D +D S LG K + P I GG Sbjct: 120 DEHAAKWNRDSWKTIRFRPRVLRPI--DGIDISRCILGTKFAAPFFICP-AGGA------ 170 Query: 75 INRNLAIAAEKTKVAMAVGSQRV---MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 LA + MA G + + ++ + + AP + A + D Sbjct: 171 ---KLAHPQADLCLTMAAGRHHILHWVCNNSHMSQKDMSDARAPDQTTFWQIYARS-DLD 226 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-----------------QEIIQ------------- 161 Q+ QA++ LG G L ++ + Q+ I+ Sbjct: 227 TTTQEVKQAIN-LGYKGFALTVDAVRAGKRERDLRVTLAQREQDGIRVNDDDEEDDNFAR 285 Query: 162 ------PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + F D S + L D+P+ +K + C D L ++ G ++ Sbjct: 286 EPSVGRPAVHPGF-DWVSAMKWLRGMTDLPIAIKGIQC---WEDAVLCMEYGAHP-WLSN 340 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDIL 274 GG S + T +S+ ++ + I GG+ G DI+ Sbjct: 341 HGGRQLDSAPSAVE---------------TLVSIRQHCPEVFDKCEVIVDGGITRGSDIV 385 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 K++ LGA GL PFL A V AI L+ E +M LLG + +L N + + Sbjct: 386 KALALGAKGVGLGRPFLYSAAFGGAGVSKAIRILKNEVETTMALLGITSLNQL--NPSYV 443 Query: 335 R 335 R Sbjct: 444 R 444 >gi|83768938|dbj|BAE59075.1| unnamed protein product [Aspergillus oryzae] Length = 368 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 109/337 (32%), Gaps = 63/337 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL 79 N+ FD + + R L +D S FLG+K+S P+ + + + + Sbjct: 42 SENETAFDRFKIRPRIL--CDVSNIDTSTTFLGEKVSLPIGFAP---TCIQCLAHPDGEA 96 Query: 80 A--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A AA + + M + + + + R+ + + + + Sbjct: 97 ATSRAATQLNIPMVLSTFSTV----SLEDVISERKEGQNPYAFQPIFPRDRSR--TLDWM 150 Query: 138 HQA-VHVLGADGLFLHLNP-------------LQ---EIIQPNGNTNF------------ 168 +A G +F+ ++ LQ + PN + N Sbjct: 151 KRAESEKSGYKAIFITVDAPVTANRLRKKRKSLQLPPHLSYPNLSDNSDRSSDKSGHDPG 210 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 I + + + + +K + C D+ + G+ I+ GG + + Sbjct: 211 KRWDEVIPWVKANTSLEVWVKGISC---PYDVLKAIDYGLDGLVISSHGGRQLDGVAAAI 267 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ ++ + + G+R G D+ +++ LGA + L Sbjct: 268 DVLAECAPL-----------------AKGRIKIGFDSGIRRGADVFRALALGADICFLGR 310 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 P A D V A+ L +E +M G ++ Sbjct: 311 IPLWGLAYDGQAGVELAVRILEEELRNTMAHAGVSKL 347 >gi|199596921|ref|ZP_03210354.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus rhamnosus HN001] gi|199592054|gb|EDZ00128.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus rhamnosus HN001] Length = 368 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 122/349 (34%), Gaps = 72/349 (20%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + RN F D H++ R L + D S F+G KL+ PLL + + G + + Sbjct: 48 YTMHRNTTAFQDVHMLPRVLQG--VENPDQSTTFMGAKLASPLLTAPIAG---NTLAHPS 102 Query: 77 RNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 L A A++ + MA + F+ ++ + AP+ + + + + Sbjct: 103 GELGLAKGAKEAGIMMA----QSTFASKTIAETAAVSDGAPYMFQLY-MPKDWDYCQYLL 157 Query: 135 QKAHQAVHVLGADGLFL------------------HL----------NPLQEIIQPNGNT 166 +A QA GA + L HL N Q + G Sbjct: 158 DEAKQA----GALAIILTADSTLGGYREKDVINHYHLKGRLANLEGYNTGQSGVGAGGL- 212 Query: 167 NFADLSSK-----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 F + K I+ L+ +P+++K + D + +G ++ GG Sbjct: 213 -FKESMQKLDLGLISKLAGYSGLPIIIKGIQH---PADAVAAITAGAAGIYVSNHGGRQL 268 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + I + I GG++ G +LK++ LGA Sbjct: 269 DGAPGAIEQLPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGA 311 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L G+ PF A+ V + L+ E ++M L G + + +L Sbjct: 312 DLVGIGRPFSYGLALGGWQGVKDVADHLKMEINIAMQLTGCQTMADLKQ 360 >gi|225442054|ref|XP_002270101.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742968|emb|CBI35835.3| unnamed protein product [Vitis vinifera] Length = 364 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 109/348 (31%), Gaps = 53/348 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F R L + ++D S LG +S P++I+ +K+ Sbjct: 31 AEDQHTLRENVEAFSRITFHPRIL--VDVSKIDMSTTVLGFNISSPIMIAPTA--MHKLA 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + V S + S F+ R + V + Sbjct: 87 HPEGEIATARAAAACNTIMVLSFMSTCTVEEVASSCNAVRFLQLYVFKRRDVSAQLVQRA 146 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN--------------GNT 166 G + + + + + L + +I G Sbjct: 147 ERNGFKAIVLTADTPRLGRREADIKNRMVSPRLKNFEGLISTEVVTDKGSNIEALASGMF 206 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + I L S ++P+L+K V L+ D ++ G+ ++ G + + Sbjct: 207 DASLSWKDIEWLRSITNLPILIKGV---LTCEDAIKAVEVGVSGIIVSNHGARQLDYVPA 263 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 T +LE + + GG+R G DI K++ LGA Sbjct: 264 ------------------TISALEEVVLAVGGKVPVLFDGGIRRGTDIFKALALGAQAVF 305 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A V IE L+ E ++M L G V+++ Sbjct: 306 IGRPVIYGLAAKGKHGVRRVIEMLKDELEITMALSGCSSVKDISRRHV 353 >gi|119511128|ref|ZP_01630246.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] gi|119464223|gb|EAW45142.1| isopentenyl pyrophosphate isomerase [Nodularia spumigena CCY9414] Length = 139 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 3/119 (2%) Query: 221 WSRIESHRD---LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 W+ +ES R L+ +G F DWG+PT + R + IASGGLR+G+D+ K+I Sbjct: 18 WAMVESERAENALQRRLGRTFADWGLPTAECITSIRAIAPDVPLIASGGLRHGLDVAKAI 77 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA +GGLA PFL+ A++S A+ ++ L E +F G L + L ++ Sbjct: 78 ALGADIGGLAMPFLQAAVESEAALYDLVQVLIAEITTVLFCTGNTTSNNLQNSRTLRKN 136 >gi|115460650|ref|NP_001053925.1| Os04g0623500 [Oryza sativa Japonica Group] gi|75326731|sp|Q7FAS1|GLO3_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=GOX 3; Short=OsGLO3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|317376201|sp|B8AUI3|GLO3_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO3; AltName: Full=Glycolate oxidase 3; Short=GOX 3; Short=OsGLO3; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO3 gi|38344169|emb|CAE03500.2| OSJNBa0053K19.8 [Oryza sativa Japonica Group] gi|113565496|dbj|BAF15839.1| Os04g0623500 [Oryza sativa Japonica Group] gi|116309753|emb|CAH66796.1| H0215F08.7 [Oryza sativa Indica Group] gi|215697011|dbj|BAG91005.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195616|gb|EEC78043.1| hypothetical protein OsI_17479 [Oryza sativa Indica Group] gi|222629584|gb|EEE61716.1| hypothetical protein OsJ_16217 [Oryza sativa Japonica Group] Length = 367 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 125/373 (33%), Gaps = 98/373 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N++ F R L I ++ + LG +S P++I+ Sbjct: 30 AEDQWTLKENREAFSRILFRPRIL--IDVSRINMATNVLGFNISMPIMIAPSAMQKMAHP 87 Query: 64 ----------------MTGG--NNKMIERIN--------------------RNLAIAAEK 85 MT + +E +N R L AE Sbjct: 88 EGELATARAASAAGTIMTLSSWSTSSVEEVNSAAPGIRFFQLYVYKDRNIVRQLVRRAEL 147 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P +++ N A+ L + Sbjct: 148 AGFKAIALTVDTPRLGRREADIKNRFNL----PPHLVLKNFEALDLGK----------MD 193 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL ++ Q + + ++ D+ L + +P+L+K V +++ D L Sbjct: 194 KTNDSGLASYV-----ASQVDRSLSWTDV----KWLQTITSLPILVKGV---MTAEDTRL 241 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 ++SG ++ G + + T LE R Sbjct: 242 AVESGAAGIIVSNHGARQLDYVPA------------------TISCLEEVVREAKGRLPV 283 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P L A+D V ++ LR E ++M L G Sbjct: 284 FLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSG 343 Query: 321 TKRVQELYLNTAL 333 + E+ N + Sbjct: 344 CTSLAEITRNHVI 356 >gi|224047440|ref|XP_002199246.1| PREDICTED: similar to hydroxyacid oxidase 1 [Taeniopygia guttata] Length = 370 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 66/373 (17%), Positives = 124/373 (33%), Gaps = 87/373 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS-----MTGG 67 + N F W L R L ++S +D S LG++++ P+ +++ M Sbjct: 31 ADDQETLADNVAAFSRWKLYPRVLRDVSV--MDLSTSVLGQRVTMPVCVAATAMQRMAHP 88 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + + A A + M + S E+ + AP + L V Sbjct: 89 HGETAT------ARACQAMGTGMMLSSWATSSIE--------EVAEAAPAGLHWLQL-YV 133 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPL--------------------------QEII 160 + +A G G+F+ ++ E+ Sbjct: 134 YKDRQVTESLVRRA-ERAGYRGIFVTVDTPYLGRRLADVRNKFQLPPHLRLKNFSSSELA 192 Query: 161 QPNGNTNFADL---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 G + I L +P++LK + L + D + +K Sbjct: 193 FSAGKDFGENSGLAVYVAEAIDATVNWEDINWLRGLTSLPIVLKGI---LRADDAKEAVK 249 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ G + + D+ +I + + G Sbjct: 250 IGVNGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDG 292 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA + P L A + ++ L++EF ++M L G RV Sbjct: 293 GVRKGTDVLKALALGAKAVFIGRPILWGLAYQGEEGAKEVLQMLKEEFRLAMALTGCWRV 352 Query: 325 QELYLNTALIRHQ 337 +E+ T + RHQ Sbjct: 353 EEIGR-TLIRRHQ 364 >gi|148653264|ref|YP_001280357.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] gi|148572348|gb|ABQ94407.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] Length = 352 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 121/340 (35%), Gaps = 59/340 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + +D L R L ++D V G +L++P+L+ + Sbjct: 46 AGDEITHQNNHRAYDHITLNPRVL--NDAKKLDTKVTLFGDELAYPILVDPFA---FQKT 100 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVM-FSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA A + K A + S D + + T + L +Q + Sbjct: 101 MHPDGELATVKGAGEAKTACVISSFTTTSLEDIQQVAT---------TPIWFQL-YIQDD 150 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQP-NGNTNFADLS 172 +F + QA G + + L+ + +++ P Sbjct: 151 LEFAKKVLKQA-EAAGCKAVCITLDSVAAAVRNEEDKVGFELSKDLNMPYKIGRPAPVSW 209 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 ++ +L + +P+L+K + +++ D + L G ++ GG Sbjct: 210 QEVEMLIAYTSLPVLIKGI---VNAEDAQRALDIGASGIIVSNHGGRKLDTAP------- 259 Query: 233 DIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 PT +L +A + + GG+R G D+LK++ LGA L P Sbjct: 260 -----------PTIEALQRVAERVDHRVPVLIDGGIRRGTDVLKALALGADAVLLGKPIA 308 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + S+ V A++ L+ EF ++M L G + + + Sbjct: 309 QALGAAGSEGVAKALKILQHEFEMAMTLTGYNTINSIDHS 348 >gi|115385817|ref|XP_001209455.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114187902|gb|EAU29602.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 490 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 117/360 (32%), Gaps = 69/360 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + L R E+D LG LS P+ +S +M G+ I Sbjct: 137 NTDVYRSIILRPRVFINCERCELD--TTVLGNPLSTPIYVSPAAMARLGHPAGEAGI--- 191 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN---- 122 A A A Q V + + + +++ R+ + + N Sbjct: 192 -AEACRSFGALQIISHNASMTPEQIVANAAPDQVFGWQIYVQIDRKKSEAMLARINKLKQ 250 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL-----------QEIIQPNGNTNFAD- 170 + V L D V + G + + G T FA Sbjct: 251 IKFVVLTLDAPVPGKREDDERNNFVGASAPVPSATANAERKSSSDDDTPGGVGRTLFAGT 310 Query: 171 -----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + L+ D P++LK + + I ++ ++ GG + Sbjct: 311 DPTLTWQETLPWLAKHTDRPIVLKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALDTAP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 P +L R YC E + GG+R G D++K++ LGA Sbjct: 370 ------------------PAVHTLLEIRKYCPEVFDRLDVLVDGGIRRGTDVVKALCLGA 411 Query: 282 SLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 GL P L + V ++ L E M LLG +RV+EL ++NT ++ Q Sbjct: 412 KAVGLGRPALWGLGAGGVEGVKRTLQILTDETKTCMRLLGVERVEELGPQHINTRIVEQQ 471 >gi|83772415|dbj|BAE62545.1| unnamed protein product [Aspergillus oryzae] Length = 452 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 112/328 (34%), Gaps = 61/328 (18%) Query: 32 IHRAL---PEISFD--EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 ++R+L P + D + D E LG K+ P+ +S ++ R A AE Sbjct: 138 VYRSLLLRPRVFVDCRKCDVETELLGWKVGLPIYVSPTA--MARLGHP--RGEAGIAEAC 193 Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 A+G+ +++ ++ + + + P T + VQL+ + + Sbjct: 194 G---ALGALQIIANNSSLSPEQVVAKALP-TQVFGWQLYVQLDRRASEAMLARVNRLDEI 249 Query: 147 DGLFLHLNPL-------QEIIQPNGNTN-------FAD------LSSKIALLSSAMDVPL 186 + L L+ E I + FA + + LS P+ Sbjct: 250 KFVILTLDAPVSGKREDDERINVKSHPAGSVSAQLFAGTDPSLTWNETLEWLSRHTKKPI 309 Query: 187 LLKEVGCGLSSMDIELGLKSGI--RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + K + + D+ + + + ++ GG S P Sbjct: 310 IFKGLQ---THEDVAIAARYTPLVQAVILSNHGGRSLDTAP------------------P 348 Query: 245 TPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSD 299 +L R +C + GG+R G D++K++ LGA G+ P L Sbjct: 349 AVHTLLEVRKFCPHVFKKMEVWVDGGIRRGTDVVKALCLGAKAVGIGRPALWGLGAGGVK 408 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V ++ L E M LLG V +L Sbjct: 409 GVERTLQILLDETKTCMRLLGATTVHDL 436 >gi|332591483|emb|CBL95266.1| glycerate oxidase [Pinus pinaster] Length = 364 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 117/350 (33%), Gaps = 47/350 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F L R L + VD S LG K+S P++I+ Sbjct: 31 AEDEWTLRENVAAFQRTRLRPRVL--VDVSNVDLSTTILGFKISAPIMIAPTAMHKLAHP 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA---------IKSFELRQYAPHTVLIS-N 122 E + AA + + S + A + ++ R + + Sbjct: 89 EGVTATARAAAAAGTIMVLSFSATSTVEEVAATCDAVRFFQLYVYKNRSISAVLAQRAER 148 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--------------NF 168 G + K + + + L L+ ++ N +T + Sbjct: 149 AGYKAIVLTADTPKLGRREADIRNKLVVPTLKNLEGLLSINMDTEKGSGLASYASQTLDS 208 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + I L S +P+L+K + L++ D EL +++G ++ G Sbjct: 209 SFSWKDIKWLQSLTSLPILIKGI---LTAEDAELAIQAGFAGIIVSNHGARQLILCHQRL 265 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 L ++ + + GG+R G D+ K++ +GA + Sbjct: 266 WLIEEV-----------------TKAVRGRVPVLFDGGIRRGTDVFKALAIGAQAVLVGR 308 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P + A+ V +E L+ E ++M L G RV+E+ + ++ Sbjct: 309 PIIYGLAVKGESGVKKVLEMLQDELELAMSLSGCCRVEEITRSHVQTENE 358 >gi|108805784|ref|YP_645721.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108767027|gb|ABG05909.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rubrobacter xylanophilus DSM 9941] Length = 366 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 111/335 (33%), Gaps = 44/335 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ L+ R L D LG + P+L++ M G + Sbjct: 46 AEDEVTLRENRAAFERLRLVPRVLRG--VSAPDLRTTVLGTPVEAPVLVAPM-GVHGLAH 102 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS---------FELRQYAPHTVLIS- 121 A A + MAV + + +A + + R A V + Sbjct: 103 PEGECASARGAGEAGTLMAVSTVSSRSIEEVSACATGPLWFQLYVYRSRGLAERLVRRAE 162 Query: 122 -------NLGAVQLNYDFGVQKAHQAVHVL-GADGLFLHLNPLQEIIQPNGNTNFADLSS 173 L A + + A + GAD + +E + P T Sbjct: 163 RAGCRALVLTADSPRWGRKERFLRVAGSLPPGADAASIDSEVGEEDLAPAALTW-----E 217 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 +A L S +P++LK V L D L ++ G ++ GG + + Sbjct: 218 DVAWLRSVSSLPVVLKGV---LHPEDAVLAVEHGAAGIVVSNHGGRQLDGAPASIEALPA 274 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK- 292 + A+ GG+R G D+LK++ LGA + P L Sbjct: 275 VVEAVAG-------------ASGGRAEVYLDGGVRRGTDVLKALALGARAVFVGRPVLWG 321 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ ++ V + LR E +M L G V L Sbjct: 322 LAVGGAEGVRRVLGLLRGELEHAMALCGQASVGGL 356 >gi|183220731|ref|YP_001838727.1| putative oxidase or carboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910832|ref|YP_001962387.1| dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775508|gb|ABZ93809.1| Dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779153|gb|ABZ97451.1| Putative oxidase or carboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 750 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 116/331 (35%), Gaps = 43/331 (12%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEV--DPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 N + ++ + LP D V + +FLG L P++ + MTG M Sbjct: 450 ETFQDNHEALAEYKI----LPGYIRDHVSPNIQSQFLGYDLKTPIMAAPMTGVGTNMNFV 505 Query: 75 INRNLAIA------AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + ++ +A + L++ +LI +L Sbjct: 506 MTDADYALTVVRSFSQNGSLAWLGDGASPE-KYKIMLD--ALKKVNGKGILICK---PRL 559 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQ--EIIQPNGNTNFADLSSKIALLSSAMDVPL 186 + + + QA G + + ++ + ++Q N ++ L + I L +P Sbjct: 560 DESLLLDRFLQA-EADGVFAIGMDIDAVNFRTMVQKNLSSVTRPLDALI-KLKGKTKLPF 617 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + ++ D +L + G ++ GG + + I V Sbjct: 618 ILKGI---MNPEDAKLAVDGGFSAIVVSNHGGRVLDGMPGTARVLPKIAEV--------- 665 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AI 305 + + GG+R+G+D+ K I LGA + P + DA + + Sbjct: 666 --------VKGKIPILVDGGVRSGMDVFKMIALGADAVLVGRPVAISLVGGEDAGIRFLL 717 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + +E SM + G K + ++ + L + Sbjct: 718 QKYSEELKQSMSVTGAKTLVDIKRSMLLHKQ 748 >gi|189418957|gb|ACD93720.1| glycolate oxidase [Mikania micrantha] Length = 369 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 120/356 (33%), Gaps = 58/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ ++ F R L I ++ + LG K+S P++++ KM Sbjct: 29 AEDQWTLEESRNAFSRILFRPRIL--IDVSKIVMTTTILGFKISMPIMVAPTA--MQKMA 84 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR----QYAPHTVLISNL---- 123 A AA M + S + A +R +++ L Sbjct: 85 HPEGEYATARAASSAGTIMTLSSWATSSVEEAASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEI-IQPNGNTNFADL---- 171 A+ L D + + + L FL L + + + N + L Sbjct: 145 ERAGFKAIALTVDTP-RLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEANDSGLASYV 203 Query: 172 ---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + L + +P+L+K V +++ D L +++G ++ G Sbjct: 204 AGQIDRTLSWKDVQWLQTITKMPILVKGV---ITAEDTRLAIQAGAAGIIVSNHGARQLD 260 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + T +LE + GG+R G D+ K++ LGA Sbjct: 261 YVPA------------------TISALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGA 302 Query: 282 SLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + P L A + V ++ LR EF ++M L G ++E+ + + Sbjct: 303 AGIFIGRPVVLSLAAEGEAGVRKVLQMLRDEFELTMALSGCTSLKEITRDHIVTEW 358 >gi|332799736|ref|YP_004461235.1| (S)-2-hydroxy-acid oxidase [Tepidanaerobacter sp. Re1] gi|332697471|gb|AEE91928.1| (S)-2-hydroxy-acid oxidase [Tepidanaerobacter sp. Re1] Length = 337 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 114/320 (35%), Gaps = 36/320 (11%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + L R L + +V S LG LS P+L + +TG + M I Sbjct: 44 SFTANIEALANVKLNLRTLHDAKTPDV--STNILGIDLSMPILSAPITGSDYNMGGAIPE 101 Query: 78 NLAIA------AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I+ + M +F +++ H + I + Sbjct: 102 AEYISMVMSGSKYAGTIGMCGDGGNPVFYTSGIE---AIKKENGHGIPIIKPRENHRVIE 158 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 Q +G D L + + QP G N +I + SA+D+P +LK + Sbjct: 159 MAKQAEEINAPAVGMDIDGAGLVTMALMGQPVGPKN----LQEIKEIISAVDLPFILKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ + +L L++G ++ GG + I + Sbjct: 215 ---MTVDEAKLALEAGAAAIVVSNHGGRILDSTPGVAQVLPAIAAKLKG----------- 260 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRK 310 + +A GG+R+GVD+LK + LGA + P + + V +E++ Sbjct: 261 ------KITILADGGVRSGVDVLKYLALGADAVLVGRPVIIGAFGGGGEGVRLVLETMAN 314 Query: 311 EFIVSMFLLGTKRVQELYLN 330 E +M L G K ++ + + Sbjct: 315 ELKQAMILTGCKDIKSINSS 334 >gi|153853845|ref|ZP_01995201.1| hypothetical protein DORLON_01192 [Dorea longicatena DSM 13814] gi|149753595|gb|EDM63526.1| hypothetical protein DORLON_01192 [Dorea longicatena DSM 13814] Length = 308 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 107/296 (36%), Gaps = 44/296 (14%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-----NRNLAIAAEKTKVAMAVGSQRVM 98 VD S+E GKK +P + + + N L + K +A G Sbjct: 36 VDTSLELFGKKFKYPFFAGPVGAVGLHYGDCLDDVAYNDILVSSCAKYGIAAFTGDGVD- 94 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--- 155 S+ + +++ + I + L+ G + VH A + + ++ Sbjct: 95 -SNVMVAATKAIKKT--DGIGIPTVKPWNLDVIAG---KMEMVHESKALAVAMDIDAAGL 148 Query: 156 --LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 L+ + P G+ ++ ++ P ++K V ++ ++G + Sbjct: 149 PFLKNMEPPAGSKT----VEELRQIAKMAGTPFIVKGV---MTVKGALKAKEAGASAIVV 201 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + GG + + T LE A + + GG+R+GVD Sbjct: 202 SNHGGRVLDQCPA------------------TAEVLEEIALAVGDSMKIFVDGGIRSGVD 243 Query: 273 ILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + K++ LGA +A PF+ + V + IE L E +M + G ++E+ Sbjct: 244 VFKALALGADAVIIARPFVTAVYGGAEEGVKSYIEKLGTELEDTMKMCGVTSLEEI 299 >gi|255576607|ref|XP_002529194.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223531372|gb|EEF33208.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 364 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 109/352 (30%), Gaps = 75/352 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNK 70 + N + F + R L + ++D S LG K+S P++I ++M N Sbjct: 31 AEDQHTLKENVEAFHRITIRPRIL--VDVSQIDMSTTILGYKISAPIMIAPTAMHKLANP 88 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E A + V S + S + + L V Sbjct: 89 EGEAATARAAAVCNT----IMVLSYMSSCTVEEVASS-------CNAIRFYQL-YVYKRR 136 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNTNFADL--------- 171 D Q +A G + L ++ +++ P NF L Sbjct: 137 DISAQLVQRA-ERNGYKAIVLTVDAPRLGRREADIRNKMVAPQ-LKNFEGLISTEVASNE 194 Query: 172 -----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I+ L S +P+L+K V L+ D ++ G+ ++ Sbjct: 195 GSNLEVFAKETFDASMSWKDISWLRSITSLPILIKGV---LTHEDAIKAVEVGVAGIVVS 251 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 G + + ++ + + GG++ G D+ Sbjct: 252 NHGARQLDYSPATITVLEEV-----------------VHAVGGKIPVLFDGGVQRGTDVF 294 Query: 275 KSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 K++ LGA + P + A V IE L+ E ++M L G V+ Sbjct: 295 KALALGAQAVLVGRPVVFGLAAKGDYGVRRVIEMLKNELELTMALSGCPSVK 346 >gi|91083635|ref|XP_970519.1| PREDICTED: similar to AGAP010885-PA [Tribolium castaneum] Length = 367 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 116/348 (33%), Gaps = 58/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+K F + + R L + + D S LG+K+ P+ IS +M Sbjct: 31 AGAEETLAHNRKAFSKYKIRPRCL--RNVAKRDLSTTVLGEKVQIPVGISPTA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFELRQYAPHTVLI----- 120 A AA+ + + + V + K F+L Y V Sbjct: 87 HPEGECANARAAQAMGTIFTLSTIATSSIEEVAQAAPYGTKWFQLYIYNDRNVTRRLVER 146 Query: 121 ---SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-------EIIQPNGNTNFAD 170 + A+ L D + + + L HL I Q + + Sbjct: 147 AEKAGFKALVLTVDTPM-FGLRLADIRNKFVLPPHLKFANFAGDKATGINQTESGSGLNN 205 Query: 171 LSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ I L S +P+++K V L++ D + G++ ++ G Sbjct: 206 YVNRLFDQSLEWKDIKWLQSFTKLPIVVKGV---LTAEDALIAADLGVQGILVSNHGARQ 262 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + +I R + + GG+ +G DI K++ LG Sbjct: 263 VDGTPASIEALPEI-----------------VRAVGDRVEVYMDGGITDGTDIFKALALG 305 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + P L A + V + L+ E +M + G V+++ Sbjct: 306 ARMVFFGRPALWGLAHSGEEGVKKILNILKTELDYTMAITGCATVRDI 353 >gi|228403|prf||1803516A glycolate oxidase Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 117/348 (33%), Gaps = 56/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLN-----PLQEIIQPN--------- 163 + A+ L D +A + FL L L ++ Q N Sbjct: 145 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLSLKNFEGLDLGKMDQANDSGLASYVA 204 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + + L + +P+L+K V L++ D + ++SG ++ G Sbjct: 205 GQIDRSLSWKDVKWLQTITSLPILVKGV---LTAEDARIAVQSGAAGIIVSNHGARQLDY 261 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T +LE + GG+R G D+ K++ LGA Sbjct: 262 V------------------LATISALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGAR 303 Query: 283 LGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + P + A + V ++ LR EF ++M L G + ++E+ Sbjct: 304 GVFIGRPVVFSLAAEGEVGVKKVLQMLRDEFEMTMTLSGCRSLKEITR 351 >gi|225443896|ref|XP_002278104.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297740741|emb|CBI30923.3| unnamed protein product [Vitis vinifera] Length = 372 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 120/373 (32%), Gaps = 98/373 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++I+ Sbjct: 32 AEDQWTLRENRNAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTAFQKMAHP 89 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 90 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRHVVAQLVRRAER 149 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + L + Sbjct: 150 AGFKAIALTVDTPRLGRREADIKNRFTL----PPFLTLKNFEGLDLGK----------MD 195 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + + + + L + +P+L+K V L++ D + Sbjct: 196 KADDSGLA-------SYVAGQIDRSLSW--KDVKWLQTITKLPILVKGV---LTAEDARI 243 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQF 261 + G ++ G + + T ++LE + Sbjct: 244 AVNVGAAGIIVSNHGARQLDYVPA------------------TIMALEEVVKATQGRIPV 285 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A D V A++ LR EF ++M L G Sbjct: 286 FLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAADGEAGVRKALQMLRDEFELTMALSG 345 Query: 321 TKRVQELYLNTAL 333 + ++E+ N + Sbjct: 346 CRSLKEISRNHIM 358 >gi|255557255|ref|XP_002519658.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223541075|gb|EEF42631.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 369 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 115/355 (32%), Gaps = 62/355 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLKENRNAFSRILFRPRIL--IDVSKIDMTTSVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + S S + + R V + Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYRDRNVVAQLVRRA 144 Query: 122 N---LGAVQLNYDFGVQKAHQAVHVLGADGL--FLHLN----------------PLQEII 160 A+ L D + + + L FL L L + Sbjct: 145 ERAGFKAIALTVDTP-RLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKSDDSGLSSYV 203 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + I L + +P+L+K V L++ D L +++G ++ G Sbjct: 204 AGQIDRTLSW--KDIKWLQTITSLPILVKGV---LTAEDTRLAIQNGAAGIIVSNHGARQ 258 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T ++LE + GG+R G D+ K++ L Sbjct: 259 LDYVPA------------------TIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GAS + P + A + + ++ LR EF ++M L G + ++E+ + + Sbjct: 301 GASGIFIGRPVVFSLAAEGEAGIRKVLQMLRDEFELTMALSGCRSLREITRDHIV 355 >gi|255942469|ref|XP_002562003.1| Pc18g01590 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586736|emb|CAP94383.1| Pc18g01590 [Penicillium chrysogenum Wisconsin 54-1255] Length = 369 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 118/360 (32%), Gaps = 69/360 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + L+ R L ++S V+ + + ++FPL +S TG +++ Sbjct: 31 ATNQVTLHDNCAAYRKYRLLPRVLRDVSL--VNTGISLFDRDITFPLCVSP-TG--MQVM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 LA A K V M + S + + EL L + +N Sbjct: 86 AHPEGELATSRACAKMGVNMGISSYANHSVEEITVAGKELGPVHHVMQLYA------MND 139 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPN-------------------------- 163 ++ + G +FL + P+ + Sbjct: 140 KAKQERIVRRAEAAGCKAIFLTADSPVLGVRWNEWRNGFMPPVGLGYPMYERTSVEIQQQ 199 Query: 164 --------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 N++ +++I L + + +K V L+ D+E ++ G I+ Sbjct: 200 SHDDGFSSTNSDSHSWATEIPWLRRVTKMEIWIKGV---LTPEDVETAIEYGCDGVIISN 256 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + D A+ + GG+R+G+DI K Sbjct: 257 HGGRQLDETPATIDALPPC-----------------AKAARGRIKIHIDGGIRSGIDIFK 299 Query: 276 SIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + P A D V ++ L +F M L G + + ++ + I Sbjct: 300 ALALGAECCWVGRPAIWGLAHDGQQGVELMLKILFDDFKRCMQLTGCRSISDINSASLAI 359 >gi|149640943|ref|XP_001514644.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 368 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 117/358 (32%), Gaps = 80/358 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L +D S LG+++S P+ +++ + + Sbjct: 31 ANDEETLADNIDAFSRWKLYPRVL--RDVSALDLSTSVLGQRVSMPICVAATA---LQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +A A M + S E+ Q AP + L + + Sbjct: 86 AHADGEIATVRACRAMGTGMMLSSWATSSIE--------EVAQAAPDGIRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFL------------------HLNPLQEIIQPN-------- 163 + Q +A +G +FL HL P + Sbjct: 137 RELTKQLVERA-EKMGYKAIFLTMDTPYLGNRLDDTRNQFHLPPHLRMKNFETSDLAFSS 195 Query: 164 --GNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 G + + L I L +P++ K + L + D +K G+ Sbjct: 196 KKGYGDKSGLAGYVAQAIDPSINWQDIKWLKGLTSLPIVAKGI---LRADDAREAVKYGV 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + D+ S++ + + GG+R Sbjct: 253 SGILVSNHGARQLDGVPATIDVLSEV-----------------VEAVEGQVEVFLDGGVR 295 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+LK+I LGA + P A + ++ L++EF ++M L G + V+ Sbjct: 296 KGTDVLKAIALGARAVFIGRPIIWGLAYQGEEGAKNVLKMLKEEFQLAMALTGCRNVK 353 >gi|299117207|emb|CBN75171.1| Glycolate Oxidase (2-Hydroxyacid Oxidase) [Ectocarpus siliculosus] Length = 386 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 123/349 (35%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEIS--FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F L LP + ++D ++ G++LS P+ +S G +K++ Sbjct: 43 DEQTLSENRQAFKRMFL----LPRMMRVVSDIDLRLDVFGQRLSMPVFVSP--AGVHKLM 96 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVM--FSD-----HNAIKSFEL----RQYAPHTVLI 120 A A + M V SQ D + F+L + +L Sbjct: 97 HPEGECATARACAEAGTLMGV-SQHATVSLEDVAAAAPRCARWFQLYILKDRELTAGILR 155 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP----------------LQEIIQPNG 164 + A V F L P +++ N Sbjct: 156 RSEKAGYTAICLTVDSVRFGSREADWRNNFNGLPPGVTLANYPTQDGYNDRVKDAWDQNT 215 Query: 165 NTNF--ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 F S IA L S +P+L+K + L++ D +++G ++ GG + Sbjct: 216 EKLFDERATWSDIAWLKSLTSLPILVKGI---LTAQDAVSAVEAGASGVIVSNHGGRALD 272 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 S + + P ++ P G+R G D+LK++ LGA+ Sbjct: 273 GSLSSIESLA-----------PVVKAVRSV-PTGANVPIFLDSGVRRGTDVLKALALGAT 320 Query: 283 LGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P F A+ + V + +R E +M L G +R+Q++ + Sbjct: 321 AVLLGRPMFFSLAVGGQEGVQRMLSIIRDELEAAMALCGCQRLQDITKD 369 >gi|317155348|ref|XP_001825035.2| hypothetical protein AOR_1_74074 [Aspergillus oryzae RIB40] Length = 957 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 121/353 (34%), Gaps = 74/353 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ + R L I D +D S LG K + P I GG Sbjct: 620 DEHAAKWNRDSWKTIRFRPRVLRPI--DGIDISRCILGTKFAAPFFICP-AGGA------ 670 Query: 75 INRNLAIAAEKTKVAMAVGSQRV---MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 LA + MA G + + ++ + + AP + A + D Sbjct: 671 ---KLAHPQADLCLTMAAGRHHILHWVCNNSHMSQKDMSDARAPDQTTFWQIYARS-DLD 726 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL-----------------QEIIQ------------- 161 Q+ QA++ LG G L ++ + Q+ I+ Sbjct: 727 TTTQEVKQAIN-LGYKGFALTVDAVRAGKRERDLRVTLAQREQDGIRVNDDDEEDDNFAR 785 Query: 162 ------PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + F D S + L D+P+ +K + C D L ++ G ++ Sbjct: 786 EPSVGRPAVHPGF-DWVSAMKWLRGMTDLPIAIKGIQC---WEDAVLCMEYGAHP-WLSN 840 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDIL 274 GG S + T +S+ ++ + I GG+ G DI+ Sbjct: 841 HGGRQLDSAPSAVE---------------TLVSIRQHCPEVFDKCEVIVDGGITRGSDIV 885 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA GL PFL A V AI L+ E +M LLG + +L Sbjct: 886 KALALGAKGVGLGRPFLYSAAFGGAGVSKAIRILKNEVETTMALLGITSLNQL 938 >gi|303317920|ref|XP_003068962.1| FMN-dependent dehydrogenase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240108643|gb|EER26817.1| FMN-dependent dehydrogenase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039031|gb|EFW20966.1| glycolate oxidase [Coccidioides posadasii str. Silveira] Length = 388 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 123/356 (34%), Gaps = 60/356 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N F + + R L + + PSVE LG+K++FP+ I+ + I Sbjct: 52 DQITVRENSTAFLKYRIRPRVL--VDVSQCCPSVECLGRKVAFPVGIAP----TVQFIAH 105 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI----SNLGAVQL 128 + +A A + + MA+GS + + + + + + A +L Sbjct: 106 PDAEIATSRACARKGINMAIGSLASNTVKDICDAGKSVDSNMTYAMQMYPFKNRIMAAKL 165 Query: 129 NYDFGVQKAHQAVHVLGADGLFL---------HLNPLQ-----------------EIIQP 162 + Q + L + + Q + + Sbjct: 166 IKEAEAQGCKAVFLTADSPTLGVRYREWKDDFRIPSEQGFPNIGWTVERLRAQSNDSVGQ 225 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + + + IA S + + +K V L++ D + ++ G ++ GG Sbjct: 226 DTLDDSQNWARDIAWFKSQTKMEIWIKGV---LTAEDTQKAVEMGCHGIIVSNHGGRQLD 282 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D + + + GG+R G DI K+I LGA Sbjct: 283 GVPATIDALPEC-----------------VKAANGRLKVHIDGGIRTGSDIFKAIALGAE 325 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA-LIRH 336 L P L A D + ++ L +F+ M L G + ++++ + ++RH Sbjct: 326 CCWLGRPALWALAYDGEKGMDLMLQVLYDDFVRCMKLAGCQTIKDITKASLGVVRH 381 >gi|15216217|emb|CAC51461.1| NAD-independent L-lactate dehydrogenase [Lactobacillus plantarum] Length = 366 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 122/353 (34%), Gaps = 67/353 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N F+ ++ RAL ++ + G L P++++ + Sbjct: 46 DEWTLKQNTMAFNHVQIVPRAL--TDMEQPSTQTQAFGIDLKTPIMMAP------AAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + AA +A + +S + + + AP + + ++DF Sbjct: 98 LAHARGEAATAEGMAQVGALMAQSTYSSTSIADTAAAGKGAPQFFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPL------QEIIQ--------------PNGNTNFADLSS 173 +AV GA + L ++ +II G+ + Sbjct: 154 QSLLDEAVKA-GAKAIILTVDATVDGYREDDIINNFQFPIPMANLTKFSEGDGKGKGIME 212 Query: 174 ------------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ ++P+++K + S D L + +G + ++ GG Sbjct: 213 IYAAAAQKISPADVRRITEYTNLPVIVKGIQ---SPEDALLAIGAGAQGIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ +I A+ I G+R G + K++ GA Sbjct: 270 NGGPASFDVLHEI-----------------AQAVNGRVPIIFDSGVRRGSHVFKALANGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L LA P + A+ + V + + L E ++ M L GTK ++++ L Sbjct: 313 DLVALARPIIYGLALGGAQGVASVVSHLNDELLIDMQLAGTKTIEDVKRAKLL 365 >gi|224121620|ref|XP_002330746.1| predicted protein [Populus trichocarpa] gi|118486606|gb|ABK95141.1| unknown [Populus trichocarpa] gi|222872522|gb|EEF09653.1| predicted protein [Populus trichocarpa] Length = 369 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 118/355 (33%), Gaps = 62/355 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVSKIDMATTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEI----------------I 160 + A+ L D + + + L FL L + + + Sbjct: 145 ERAGFKAIALTVDTP-RLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKAADSGLASYV 203 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L + +P+L+K V L++ D L +++G ++ G Sbjct: 204 AGQIDRTLSW--KDVEWLQTITKLPILVKGV---LTAEDARLSVQAGAAGIIVSNHGARQ 258 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + T ++LE + GG+R G D+ K++ L Sbjct: 259 LDYVP------------------STIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GAS + P + A + V ++ LR+EF ++M L G + ++E+ + Sbjct: 301 GASGIFIGRPVVFSLASEGETGVRKVLQMLREEFELTMALSGCRSLKEITRAHIV 355 >gi|270008313|gb|EFA04761.1| hypothetical protein TcasGA2_TC030629 [Tribolium castaneum] Length = 350 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 111/338 (32%), Gaps = 55/338 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS-----MTGG 67 + + N+K F + + R L + + D S LG+K+ P+ IS M Sbjct: 31 AGAEETLAHNRKAFSKYKIRPRCL--RNVAKRDLSTTVLGEKVQIPVGISPTAMQRMA-- 86 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + ++ A+ ++ + + + + A+ Sbjct: 87 HPEGDTIATSSIEEVAQAA--PYGTKWFQLYIYNDRNVTRRLVERAEKAGF-----KALV 139 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-------EIIQPNGNTNFADLSSK------ 174 L D + + + L HL I Q + + ++ Sbjct: 140 LTVDTPM-FGLRLADIRNKFVLPPHLKFANFAGDKATGINQTESGSGLNNYVNRLFDQSL 198 Query: 175 ----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L S +P+++K V L++ D + G++ ++ G + + Sbjct: 199 EWKDIKWLQSFTKLPIVVKGV---LTAEDALIAADLGVQGILVSNHGARQVDGTPASIEA 255 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +I R + + GG+ +G DI K++ LGA + P Sbjct: 256 LPEI-----------------VRAVGDRVEVYMDGGITDGTDIFKALALGARMVFFGRPA 298 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A + V + L+ E +M + G V+++ Sbjct: 299 LWGLAHSGEEGVKKILNILKTELDYTMAITGCATVRDI 336 >gi|42516879|emb|CAD92062.1| isopentenyl diphosphate isomerase type 2 [Haloferax mediterranei] Length = 136 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 5/138 (3%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV--MFSDHNAIKSFEL-RQYAPHT 117 I SMTGG+ +I+R LA A +T +AM VGSQR D + ++S+ + R AP Sbjct: 1 IDSMTGGHPNTT-KISRALAAGAAETGIAMGVGSQRAGLELDDEDLLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + N+GA QL ++ +AV ++ AD L +HLN LQE +QP G+ N + I Sbjct: 60 FIYGNIGAAQLR-EYETAMVERAVEMIDADALAVHLNFLQEAVQPEGDINAEGCLAAIER 118 Query: 178 LSSAMDVPLLLKEVGCGL 195 +SS + VP+++KE G G+ Sbjct: 119 VSSELSVPIVVKETGNGI 136 >gi|169606690|ref|XP_001796765.1| hypothetical protein SNOG_06393 [Phaeosphaeria nodorum SN15] gi|111065104|gb|EAT86224.1| hypothetical protein SNOG_06393 [Phaeosphaeria nodorum SN15] Length = 386 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 104/324 (32%), Gaps = 36/324 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + + +HL R L +I+ E LG S P IS Sbjct: 71 AAGEWSYRNNLEVYSRFHLRPRVLVDITKIEESLPTTILGYNFSAPFFISPCA---RAGY 127 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + L + A + + D + R VL + + Sbjct: 128 AHPDGELGLVKGAAEGDILYMASLYS----DKKRDDIYAARAGNGSQVLFQQVYLDDPSI 183 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIALLSSA 181 + + + GA + L ++ + ++ + L S Sbjct: 184 NATAKLFKD-IEANGAKAIILTVDSAGDGVRHRAARDGKGSANSGYSYFTWDFFKELQSL 242 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P++ K + + D +L + +G + I+ GG S ++ +I Sbjct: 243 TTLPVVPKGIQ---TVEDAKLAIDNGAKAIFISNHGGRQLDSAPSALEIALEIYN----- 294 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 + + A GG+R GVD LK + LG GL PF+ + ++ V Sbjct: 295 ---------EDPEIFKKVEVYADGGVRYGVDALKLLALGVRAVGLGRPFMYANVYGAEGV 345 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQ 325 A++ ++ E LG ++ Sbjct: 346 ARAVKMMKYELTNDAANLGVGNLK 369 >gi|169764020|ref|XP_001727910.1| cytochrome B2 [Aspergillus oryzae RIB40] gi|83770938|dbj|BAE61071.1| unnamed protein product [Aspergillus oryzae] Length = 498 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 120/363 (33%), Gaps = 72/363 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R I + D LG KL P+ +S +M G+ I Sbjct: 142 NTEVYRSILLRPRVF--IDCTQCDLDTTLLGHKLGMPIYVSPAAMARLGHPAGEAGI--- 196 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN---- 122 A A A Q V + + + +++ R+ + + N Sbjct: 197 -AEACRSFGAMQVISNNASMTPEQIVKDAAPDQVFGWQIYVQIDRKKSEAMLARINKLKQ 255 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-----------NPLQEIIQPNGNTN---F 168 + + L D V + A G + + I Q +G F Sbjct: 256 IKFIVLTLDAPVPGKREDDERGNAIGASAPVPSAAKTADSAEDETSRINQSSGGVGKQLF 315 Query: 169 AD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 A + L+ ++P++LK + + I ++ ++ GG + Sbjct: 316 AGTDPSLTWKETLPWLAERTNLPIILKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALD 374 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P +L R YC E + GG+R G D++K++ Sbjct: 375 TAP------------------PAVHTLMEIRKYCPEVFDRLEVWVDGGIRRGTDVVKALC 416 Query: 279 LGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALI 334 LGA G+ P L D V ++ L E M LLG + V +L ++NT L+ Sbjct: 417 LGAKAVGIGRPALWGLGAGGVDGVKRTLQILADESKTCMRLLGVETVDKLGPQHINTRLL 476 Query: 335 RHQ 337 Q Sbjct: 477 EQQ 479 >gi|5689233|dbj|BAA82872.1| unnamed protein product [Homo sapiens] Length = 370 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 115/360 (31%), Gaps = 84/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ--------------- 157 + + QA +G +F+ ++ P Q Sbjct: 137 REVTKKLVRQA-EKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSP 195 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + I L +P++ K + G D +K Sbjct: 196 EENFGDDSGLAAYVAKAIDPSISW--EDIKWLRRLTSLPIVAKGILRG---DDAREAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D+ +I + + GG Sbjct: 251 GLNGILVSNHGARQLDGVPATIDVLPEI-----------------VEAVEGKVEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + P A V + L++EF ++M L G + V+ Sbjct: 294 VRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLXILKEEFRLAMALSGCQNVK 353 >gi|323700682|ref|ZP_08112594.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio sp. ND132] gi|323460614|gb|EGB16479.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio desulfuricans ND132] Length = 338 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 104/317 (32%), Gaps = 33/317 (10%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + + L R L E D S LG LS P++ + + G + M ++ Sbjct: 42 SFKANVEALEGFRLNMRLLH--DAAEPDTSTTLLGIDLSMPVMAAPIGGVSFNMGGGVSE 99 Query: 78 NLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A V G F + + A + + + Sbjct: 100 EDYIDAVIGGSRAAGVIGCTGDGVPPFIHEAGFA--AIEKNAGRGIPFIKPWEGEELNEK 157 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + V G D L L+++ +P KI L +LK + Sbjct: 158 LEKARKTGCTVFGMDVDAAGLITLRQMGRP-VAPKPVSELKKIIDLVHGWGAKFILKGI- 215 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EM 251 ++ + EL +K+G ++ GG T +L ++ Sbjct: 216 --MTPDEAELAVKAGADAIVVSNHGGRVLDHTPG------------------TAEALPDV 255 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRK 310 A + + GG+R G D+LK + LGA + P A+ + V +++ Sbjct: 256 AEKVHGKITILVDGGIRTGADVLKMLALGADGVLIGRPVSVAAVGGLQEGVEKYYATIKA 315 Query: 311 EFIVSMFLLGTKRVQEL 327 + +M L G K + + Sbjct: 316 QLSGAMVLTGCKDIASI 332 >gi|257439371|ref|ZP_05615126.1| dehydrogenase, FMN-dependent family [Faecalibacterium prausnitzii A2-165] gi|257198246|gb|EEU96530.1| dehydrogenase, FMN-dependent family [Faecalibacterium prausnitzii A2-165] Length = 339 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 110/337 (32%), Gaps = 67/337 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE------- 73 RN + + + L E S D VE GK +P + G + Sbjct: 47 RNYNKWAEIRVNMDTLCENST--PDTGVELFGKTFRYPFFAGPV--GAVNLHYSDTYTDM 102 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN--LGA-----V 126 N L A + +A G P + ++ +GA V Sbjct: 103 TYNDVLVRACAENGIAAFTGD-----------------GTNPDVMTMATKAIGAAGGCGV 145 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALL 178 + + + A G F L L+ + P G+ + A+L A + Sbjct: 146 PTIKPWNIDTVKAKMEQAKASGCFAVAMDVDAAGLPFLKNMTPPAGSKSVAEL----AEI 201 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + P ++K V ++ ++G ++ GG + + ++ +I Sbjct: 202 VKLAERPFIVKGV---MTVKGALKAKEAGAAAIVVSNHGGRVLDQCPATAEVLPEIAEAL 258 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 + G + + GG+R GVD+ K++ LGA + PF+ Sbjct: 259 KGSG----------------VKILVDGGIRTGVDVFKALALGADAVLICRPFVTAVYGGG 302 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V I+ + E +M + G + E+ + I Sbjct: 303 EEGVKCYIDKIAAELADTMQMCGAHSLAEITRDMVRI 339 >gi|224117076|ref|XP_002317470.1| predicted protein [Populus trichocarpa] gi|118489504|gb|ABK96554.1| unknown [Populus trichocarpa x Populus deltoides] gi|222860535|gb|EEE98082.1| predicted protein [Populus trichocarpa] Length = 369 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 119/354 (33%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVSKIDMATTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEI----------------IQ 161 + A+ L D + + + + FL L + + + Sbjct: 145 ERAGFKAIALTVDTPRLGRRESDIKNRFSLPPFLTLKNFEGLDLGKMDKADDSGLASYVA 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V L++ D L +++G ++ G Sbjct: 205 GQIDRTLSW--KDVEWLQTITRLPILVKGV---LTAEDARLSVQAGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T ++LE + GG+R G D+ K++ LG Sbjct: 260 DYVP------------------STIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AS + P + A + V ++ LR+EF ++M L G + ++E+ + + Sbjct: 302 ASGIFIGRPVVFSLASEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIV 355 >gi|70991238|ref|XP_750468.1| mitochondrial cytochrome b2 [Aspergillus fumigatus Af293] gi|66848100|gb|EAL88430.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus Af293] gi|159130941|gb|EDP56054.1| mitochondrial cytochrome b2, putative [Aspergillus fumigatus A1163] Length = 471 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 115/349 (32%), Gaps = 68/349 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R I + D FLG KL P+ +S +M G+ I Sbjct: 142 NTEVYRSIILRPRVF--IDCTKCDLDTSFLGHKLGMPIYVSPAAMARLGHPAGEAGI--- 196 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGA 125 A A A Q V + + + +++ ++ I+ L A Sbjct: 197 -AEACRSFGAMQIISNNASMTPEQIVKDAAPDQVFGWQIYVQIDRKKSEAMLARINKLKA 255 Query: 126 VQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE-----------IIQPNGNTN--FA 169 ++ L D V + + + + + QP G FA Sbjct: 256 IKFIVLTLDAPVPGKREDDERGNNVAASMPVPSAAKAADKAADGTPIVSQPGGVGKQLFA 315 Query: 170 D------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L+ D+P++LK + + I ++ ++ GG + Sbjct: 316 GTDPSLTWKDTLPWLAKHTDLPIVLKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALDT 374 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIIL 279 P +L R YC E GG+R G D++K++ L Sbjct: 375 AP------------------PAVHTLLEIRKYCPEVFDKLDVWVDGGIRRGTDVVKALCL 416 Query: 280 GASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA G+ P L D V ++ L E M LLG +RV++L Sbjct: 417 GAKAVGIGRPALWGLGAGGVDGVKRTLQILADETKTCMRLLGVERVEDL 465 >gi|254558033|ref|YP_003064450.1| lactate oxidase [Lactobacillus plantarum JDM1] gi|254046960|gb|ACT63753.1| lactate oxidase [Lactobacillus plantarum JDM1] Length = 366 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 122/353 (34%), Gaps = 67/353 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N F+ ++ RAL ++ + G L P++++ + Sbjct: 46 DEWTLKQNTMAFNHVQIVPRAL--TDMEQPSTQTQAFGIDLKTPIMMAP------AAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + AA +A + +S + + + AP + + ++DF Sbjct: 98 LAHARGEAATAEGMAQVGALMAQSTYSSTSIADTASAGKGAPQFFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNF-------------------ADLSS 173 +AV GA + L ++ + + + NF + Sbjct: 154 QSLLDEAVKA-GAKAIILTVDATVDGYREADIINNFQFPIPMANLTKFSEGDGKGKGIME 212 Query: 174 ------------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ ++P+++K + S D L + +G + ++ GG Sbjct: 213 IYAAAAQKISPADVRRITEYTNLPVIVKGIQ---SPEDALLAIGAGAQGIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ +I A+ I G+R G + K++ GA Sbjct: 270 NGGPASFDVLHEI-----------------AQAVNGRVPIIFDSGVRRGSHVFKALANGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L LA P + A+ + V + + L E ++ M L GTK ++++ L Sbjct: 313 DLVALARPIIYGLALGGAQGVASVVSHLNDELLIDMQLAGTKTIEDVKRAKLL 365 >gi|260803954|ref|XP_002596854.1| hypothetical protein BRAFLDRAFT_115875 [Branchiostoma floridae] gi|229282114|gb|EEN52866.1| hypothetical protein BRAFLDRAFT_115875 [Branchiostoma floridae] Length = 380 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 123/360 (34%), Gaps = 63/360 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L R L ++S D + LG+ L FP+ ++ +M Sbjct: 31 ANNEQTLRDNVDAFRSYRLRPRFLRDVSRR--DTTTTVLGELLDFPVALAPTA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSD-----HNAIKSFELRQYAPHTVLISNL-- 123 A AA M + S + ++ F+L + NL Sbjct: 87 HPDGEVASAKAAASMNTGMILSSWATSTIEEVAEAAPRGLRWFQL-YVYKDRQVTRNLVE 145 Query: 124 -------GAVQLNYDFGVQKAHQAVHVLGADGLFLHL--------NPLQEIIQPNGNT-- 166 A+ L D + + L HL + +Q + ++ Sbjct: 146 RAEKAGYKAIFLTIDTPI-LGKRLEDTRNKFKLPAHLRLANFSEGDVRSSRVQSDSDSGL 204 Query: 167 --------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L S +P++LK V L++ ++ G+ ++ G Sbjct: 205 AAYVASLIDPSLSWEHVDWLRSVTKLPIILKGV---LTAEVAREAVEHGVDGILVSNHGA 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + + D ++ + + GG+R G D+LK++ Sbjct: 262 RQLDGVPATIDALREVAS-----------------AVNGQVEVYLDGGVRTGTDVLKALA 304 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 LGA + P L A + V ++ L++EF +SM L G RV + AL+ H+ Sbjct: 305 LGARCVFVGRPVLWGLAYKGQEGVQEMLQMLKEEFSLSMALSGCSRVSAI--TPALVVHE 362 >gi|1773330|gb|AAB40396.1| glycolate oxidase [Mesembryanthemum crystallinum] Length = 370 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 118/354 (33%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLAENRNAFSRILFRPRIL--IDVTKIDMTTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + S S + ++ R V + Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRA 144 Query: 122 N---LGAVQLNYDFGVQKAHQA-----------VHVLGADGLFLHL------NPLQEIIQ 161 A+ L D +A + + +GL L + L + Sbjct: 145 ERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGTMDKADDSGLASYVA 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + + L + +P+L+K V L++ D L +++G ++ G Sbjct: 205 GQIDRSLSW--KDVKWLQTITSLPILVKGV---LTAEDARLSVQNGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T ++LE + GG+R G D+ K++ LG Sbjct: 260 DYVP------------------STIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AS + P + A + V ++ +R EF ++M L G + +QE+ N + Sbjct: 302 ASGIFIGRPVVFSLAAEGEAGVRKVLQMMRDEFELTMALSGCRSIQEISRNHIV 355 >gi|169610864|ref|XP_001798850.1| hypothetical protein SNOG_08540 [Phaeosphaeria nodorum SN15] gi|111062588|gb|EAT83708.1| hypothetical protein SNOG_08540 [Phaeosphaeria nodorum SN15] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 120/361 (33%), Gaps = 83/361 (22%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGG--------- 67 + N + R + + +VD + G + +P IS M T G Sbjct: 142 SLQCNLDDWGRVSFRPRVM--RNVGDVDTRRKIFGHESPYPFYISPMGTMGAIHPNGEPE 199 Query: 68 -----------------NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL 110 ++K E+I + A +K M+ ++ F + + Sbjct: 200 MYKGALRKGIHAVVSTASSKSTEQIMQAFMEAQKK----MSASPTKLFFQYYMPVD---- 251 Query: 111 RQYAPHTVLI---SNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHL------------- 153 R+ A + I + + + D V A L A+ L + L Sbjct: 252 RKKAMELLRIVKRCDYKGLWITVDAPVLGKRTADRYLQAEEMLSMGLAEEATAEWETSGD 311 Query: 154 N---PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 N P G + +A + D ++LK + C D +L ++ G Sbjct: 312 NKFAPAMGGRMVQGQLSPYMSWEDLAWIRKEWDGSIVLKGIQCA---EDAKLAMEHGCDG 368 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGG 266 ++ GG ++L R YC E + GG Sbjct: 369 ILLSNHGGRQLHTAP------------------SALMTLCEIRTYCPEVMNKLEIFLDGG 410 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 LRNG D+LK++ LGA+ G+ PFL S V ++ L KE M LLG ++ Sbjct: 411 LRNGNDVLKALCLGATAVGVGRPFLYALGAYGSKGVEKCVDVLAKELRTGMRLLGITSLE 470 Query: 326 E 326 + Sbjct: 471 Q 471 >gi|255954989|ref|XP_002568247.1| Pc21g12160 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589958|emb|CAP96113.1| Pc21g12160 [Penicillium chrysogenum Wisconsin 54-1255] Length = 488 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 115/346 (33%), Gaps = 70/346 (20%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------------- 65 N + L R L + EV LG S P +S Sbjct: 146 HANLNSYRQIMLRPRVL--RNVKEVKMPRTILGCPSSAPFFVSPTAMAKLAHPDGELAVA 203 Query: 66 -G-GNNKMIERINRN----LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 G G +I I+ N LA K Q + S+ + LR+ A Sbjct: 204 RGCGEEDIIHIISNNASFPLAEIVAAGKPGQGFFLQLYVNSNRRKTEEL-LREAAGLG-- 260 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------- 171 + AV + D + +A + A L ++ + + + L Sbjct: 261 ---IKAVFVTVDAPIPGKREADERIAAGNL---VSAVSGAV-ARNDEKGGGLGRVMAKYI 313 Query: 172 -----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A + +P++LK V G D+ + ++ G+ ++ GG S + Sbjct: 314 DSTLNWEDLAWIKKVSGLPIVLKGVQTG---ADVRMAMEYGVDAIMLSNHGGRSLDTV-- 368 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGAS 282 P ++L C E + GG+R G DILK++ LGA+ Sbjct: 369 ----------------QPAIITLLELHRTCPEVFGRMEIYIDGGIRRGTDILKALALGAT 412 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+ P+L + V + L+ E + +M L G + + + Sbjct: 413 AVGIGRPYLYSLTYGQEGVEHLTQILKDELVSAMKLSGITHIDQAH 458 >gi|159491040|ref|XP_001703481.1| glycolate oxidase [Chlamydomonas reinhardtii] gi|158280405|gb|EDP06163.1| glycolate oxidase [Chlamydomonas reinhardtii] Length = 382 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 121/345 (35%), Gaps = 57/345 (16%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N+ F + L+ R L + VD S E G + S P+ ++ M + Sbjct: 36 YTVGENRSCFSRYLLLPRML--RNVSRVDTSHELFGIRSSMPVWVAPMA---MHGLAHPG 90 Query: 77 RNLAIAAEKT--KVAM-----AVGSQRVMFSDHNAIKSFE---------LRQYAPHTVLI 120 R +A V A S + + + + F+ +R++ Sbjct: 91 REVATCRAAAAAGVPFTFSTVATSSLQEIQETGHDNRIFQLYVIRNREVVRRWVTEAESR 150 Query: 121 SNLGAVQLNYD---FGVQKAHQAVHVLGADGLFL-HLNPLQEIIQPNGNTNFADLSSK-- 174 A+ + D G ++A GL L +L L + + + L Sbjct: 151 G-FKALMVTVDAQRLGNREADARNKFTLPPGLALRNLEYLSSASTARDSQDGSGLMKLFT 209 Query: 175 -----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 I L +P+++K + LS D EL ++ G+ ++ GG Sbjct: 210 SEVDDSLTWEFIPWLRGVTKLPIIVKGL---LSPADAELAVQYGVDGIVVSNHGGRQLDY 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S + + + G + + GG+R G D++K++ LGAS Sbjct: 267 APSGLHMLPAVVAAVRGCG--------------SSIPVLVDGGVRRGTDVIKALALGASG 312 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P L A+ V ++ LR E +SM L G VQ++ Sbjct: 313 VLLGRPVLYGLAVGGQAGVERVLQLLRSEIELSMALAGCSSVQQI 357 >gi|223938158|ref|ZP_03630055.1| FMN-dependent alpha-hydroxy acid dehydrogenase [bacterium Ellin514] gi|223893202|gb|EEF59666.1| FMN-dependent alpha-hydroxy acid dehydrogenase [bacterium Ellin514] Length = 363 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 117/351 (33%), Gaps = 59/351 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F+ + ++ + + + D + LG+K+S P+L++ + Sbjct: 30 AWDEVTLRENCNAFNRIQVHYKVM--VDVSKRDLTTTVLGQKVSMPILLAPTA---FHKL 84 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISN 122 + +A AA + M + S + + + L++ Sbjct: 85 AHPDGEVATVRAAGASNTIMTLSSLSTTKVEEVTAAAKSPVWFQLYINKDRGFTRDLVAR 144 Query: 123 LGAV-------------QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-- 167 + A + V+ L A L + N E I +G Sbjct: 145 VKAAGCKALMLTVDTPEWGRRERDVRNCFHLPPGLSAINL-IPSNERGEFIGQHGAGMGQ 203 Query: 168 -FADLSS------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 F + + L S D+P+++K V D EL ++ G+ ++ G Sbjct: 204 AFTWMLDPSLTWKDVEWLRSITDLPIIVKGVCR---PDDAELAIQHGVSAVLVSNHGARQ 260 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + ++ I + GG+R G+D+ K++ LG Sbjct: 261 MDTAPATIEVLPAIAE-----------------QVAGRVPVLLDGGIRRGLDVFKALALG 303 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P L A V A+E LRKE ++M L G + + + Sbjct: 304 ATAVQIGRPVLWGLANGGQQGVQTALELLRKELDLAMALAGCPDIASIKRD 354 >gi|321477409|gb|EFX88368.1| hypothetical protein DAPPUDRAFT_305470 [Daphnia pulex] Length = 351 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 122/346 (35%), Gaps = 56/346 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N++ F W L+ R L + + LG +S P+ I+ KM Sbjct: 35 ADQEQTLRDNREAFKRWRLMPRVLRGVEHRL--MATTALGYPVSAPIGIAPTA--MQKMA 90 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA + + + + E+ + AP L + + Sbjct: 91 HEMGELATAKAASDEGIVYVLSTVATSTIE-------EVSEAAPKGNNWFQL-YIYKDRQ 142 Query: 132 FGVQKAHQAVHVLGADGLFLHL-------------NPLQEIIQPNGNTNFADL------S 172 V +A L + + N L + + N A L Sbjct: 143 VTVDMVRRA-EQANFKALVVTVDTVILGRRLATERNELSDTGSSSSNNFVASLFDPSLTW 201 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I+ L S +P+++K + L D EL ++ G+ ++ GG + + D Sbjct: 202 KDISWLKSITKMPIVVKGI---LRPDDAELAVQHGVAAIAVSNHGGRQLDGVPATIDALP 258 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I + + GG+ G D+ K++ LGA + P L Sbjct: 259 AI-----------------VKQVNGRCEVYVDGGITQGTDVFKALALGARMVFFGRPTLW 301 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 S +A VV+ I L+KE ++M L G V ++ + +L+ HQ Sbjct: 302 GLAHSGEAGVVSIIRLLKKELDLAMALSGCSSVTDI--DRSLVVHQ 345 >gi|320352843|ref|YP_004194182.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfobulbus propionicus DSM 2032] gi|320121345|gb|ADW16891.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfobulbus propionicus DSM 2032] Length = 340 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 112/313 (35%), Gaps = 38/313 (12%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER------I 75 N + L R + S E D S+ G+KLS P+L + +TG + M + I Sbjct: 48 NLEALAKVKLNMRTIH--SVKEPDMSLTLWGRKLSMPILGAPITGSSYNMGGKMTEEEFI 105 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 +A A + + M D S I+ + + G Sbjct: 106 AEMVAGAIQAGTLCMTGDGA-----DPRMFDSGLKAGADNKGGSIAIIKPRAQDVVVG-- 158 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 +A G + ++ + G ++++ + +A +P ++K V Sbjct: 159 -HLRAAEATGVLATGMDIDGAGLVTMAMKGQPVGPKTATELREVINATKLPFIVKGV--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 +++ + E +++G ++ GG ++ I Sbjct: 215 MTADEAEEAVQAGAAAIVVSNHGGRVLDFTPGAAEVLPAIAA-----------------R 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFI 313 +A A GG+R+G D+LK + LGA + P + A + V + L+ E + Sbjct: 258 VKGKAIIFADGGVRSGADVLKLLALGADAVLVGRPLVIAAFGGGREGVALYLNQLKGELL 317 Query: 314 VSMFLLGTKRVQE 326 +M L GT V++ Sbjct: 318 QAMLLTGTADVKQ 330 >gi|242806118|ref|XP_002484679.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] gi|218715304|gb|EED14726.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] Length = 385 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 66/353 (18%), Positives = 119/353 (33%), Gaps = 68/353 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + F+ L R I D S +G+ P+ IS M + + Sbjct: 49 NTEAFNSILLRPRIF--IDVSRCDLSTTIMGQPSGLPIFISPMA--MARRFHPSGEAGVT 104 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----LG 124 A K V A + V + + F+L R+ + + N + Sbjct: 105 QACCKFGVMHIISNNASMTPEEIVENAAPDHAHGFQLYVQMDRRESEAVLARINKLKVIK 164 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-----GNTNFAD------LSS 173 + L D V H+ G Q+ +P+ + + Sbjct: 165 CLVLTLDEPVPGKHELKGQHGGKAEI------QDRFEPSPQLTPAVPSISGPAYNLTWKD 218 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESHRDLES 232 ++ ++ ++P++LK + + D + + ++ ++ G Sbjct: 219 TLSWITQHTELPIVLKGIQ---THEDAYIASQFPQVKSIILSNHAGRVLDTAP------- 268 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLAS 288 P +L R YC E + + GG+R G D++K++ LGA G+ Sbjct: 269 -----------PAVHTLLEIRKYCPEVFDIVEVLVDGGIRRGTDVVKALCLGAKGVGIGR 317 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 F V IE L E M LLG +RV +L ++NT++I Q Sbjct: 318 SVFWGLGAGGVRGVERTIEILADEIKTCMQLLGVRRVADLGLQHVNTSIIEQQ 370 >gi|148922162|gb|AAI46640.1| LOC100101335 protein [Xenopus laevis] Length = 371 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 119/358 (33%), Gaps = 62/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L R L ++S D S LG+++ P+ + + +M Sbjct: 33 ADDQQTLADNVDAFSRYRLYPRVLRDVSVT--DLSTTVLGQRIRMPICVGATA--MQRMA 88 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLI 120 A A M + S + A S ++ R+ V Sbjct: 89 HPDGETATARACGALGTGMMLSSWATSSIEEVASASPDSLRWMQLYIYKDRRLTQSLVQR 148 Query: 121 SN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNGNTNF---ADL 171 + A+ L D + + V L HL N E + + F + L Sbjct: 149 AERSGYRAIFLTVDTP-RLGRRLADVRNKFQLPPHLRMKNFDTEELAFSSKQGFGENSGL 207 Query: 172 -------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + I L +P+++K + + + D + +K G ++ G Sbjct: 208 AVYVAQAIDASINWNDIDWLRGITSLPIIVKGI---VRADDAKEAVKRGASGILVSNHGA 264 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + + D+ +I + + GG+R G D+LK++ Sbjct: 265 RQLDGVPATIDVLQEI-----------------IEAVDGKVEVYLDGGIRKGTDVLKALA 307 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LGA + P L A + V + L +E ++M L G V E+ + +L+R Sbjct: 308 LGARAVFVGRPVLWGLAYQGEEGVKDVLNILMEELRLAMSLAGCSSVNEI--DKSLVR 363 >gi|260802506|ref|XP_002596133.1| hypothetical protein BRAFLDRAFT_202845 [Branchiostoma floridae] gi|229281387|gb|EEN52145.1| hypothetical protein BRAFLDRAFT_202845 [Branchiostoma floridae] Length = 360 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 119/342 (34%), Gaps = 72/342 (21%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 N F + LI R L ++S D +V LG KL FP+ I+ + + + Sbjct: 39 QTYQDNVDAFKRYRLIPRNLRDVSIR--DTTVTVLGTKLDFPVAIAPTA---MQRLAHPD 93 Query: 77 RNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLISN- 122 LA A A M + S + A + F+ R+ H + + Sbjct: 94 AELATAKGAASVNTGMVLSSWANHSLEEVAKAAPRGVRWFYLLFFKDRRLTRHMLERAQR 153 Query: 123 -------LGAVQLNYDFGVQK----------------AHQAVHVLGADGLFLHLNPLQEI 159 L A Q ++ F + A V ++G + HL Sbjct: 154 AGYTAIVLTADQPSFSFSRHEKPTLPPVLVRYPNAYYAGDPVGLVGTVEVEEHL------ 207 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + +P++LK + LS D + + G+ ++ GG Sbjct: 208 ---RATVKVPGTWEDVEWVKKNTSLPVVLKGI---LSVEDAKTAVNLGVDAVYVSNHGGR 261 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + D+ DI R +A+ GG+R G D+LK++ L Sbjct: 262 QMDGLPATIDVLPDI-----------------VRAVDGKAEVYLDGGVRTGTDVLKALAL 304 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GAS + P L A + ++ V + LR EF ++M G Sbjct: 305 GASCVFIGRPALWGLACNGAEGVGQVLRVLRDEFSLAMARAG 346 >gi|313661515|ref|NP_001186371.1| hydroxyacid oxidase 1 [Gallus gallus] Length = 373 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 124/368 (33%), Gaps = 74/368 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L ++S +D S LG+K+S P+ +++ +M Sbjct: 31 ADDQETLADNVAAFSRWKLYPRVLRDVSV--MDLSTSVLGQKISMPVCVAATA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 A A M + S E+ + AP + L V + Sbjct: 87 HPDGETATAKACHAMGTGMMLSSWATSSIE--------EVAEAAPGGLRWLQL-YVYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP---------------------LQEIIQPNGN---T 166 + +A G G+F+ ++ L+ N + Sbjct: 138 EVTKSLVKRA-ERAGYKGIFVTVDTPFLGRRIDDVRNKFQLPPHLRLKNFSSNNLDFSGR 196 Query: 167 NF---ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 +F + L I L +P++ K + L + D + +K G+ Sbjct: 197 DFGEDSGLAVYVANAIDASVNWEDIKWLRGLTSLPIVAKGI---LRADDAKEAVKLGVHG 253 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + + DI E+ + + GG+R G Sbjct: 254 ILVSNHGARQLDGVSCNVPATIDILP-------------EIVEAVEGKVEVFLDGGIRKG 300 Query: 271 VDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 DILK++ LGA + P + ++ L++EF ++M L G + V+E+ Sbjct: 301 TDILKALALGAKAVFIGRPLIWGLVYQGEEGAKEVLQMLKEEFRLAMALTGCRTVKEIGR 360 Query: 330 NTALIRHQ 337 T + RH+ Sbjct: 361 -TLIRRHE 367 >gi|118779913|ref|XP_309809.3| AGAP010885-PA [Anopheles gambiae str. PEST] gi|116131396|gb|EAA05477.3| AGAP010885-PA [Anopheles gambiae str. PEST] Length = 368 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 114/350 (32%), Gaps = 60/350 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ FD + R L S D S G++ S P+ IS +M Sbjct: 34 AGDELSLHLNRTGFDRLRIRPRMLQGGSTR--DLSCTVFGQRFSMPIAISPTA--MQRMA 89 Query: 73 ER---INRNLAIAAEKTKVAMAVGSQRVMFS----DHNAIKSFEL-----RQYAPHTVLI 120 + A A + ++ S + NA K F+L RQ V Sbjct: 90 HPDGEVANAKAAATRQVLFTLSTISTSSIEQVAEATPNAPKWFQLYIYRDRQLTEELVRR 149 Query: 121 SN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-----------------EII 160 + A+ L D + +A + L HL+ E I Sbjct: 150 AERAGFRAIVLTVDAPLFGLRRA-DMRNKFSLPPHLSMANFVGKAASIRSQGGSGINEYI 208 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L +P+++K + L+ D + G++ ++ G Sbjct: 209 AEQLDPTLSW--DDVKWLLGFTKLPVIVKGI---LTREDAIIAADLGVQGIFVSNHGARQ 263 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + + +I + GG+ G D+ K++ LG Sbjct: 264 LDSVPASIEALPEI-----------------VAAVGRRVEIFLDGGITQGTDVFKALALG 306 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 A + P L A++ V ++ LR E ++M L G K + ++ Sbjct: 307 ARMVFFGRPALWGLAVNGQAGVEHVLDILRNELDLTMALAGCKTLADITK 356 >gi|212528498|ref|XP_002144406.1| mitochondrial cytochrome b2-like, putative [Penicillium marneffei ATCC 18224] gi|210073804|gb|EEA27891.1| mitochondrial cytochrome b2-like, putative [Penicillium marneffei ATCC 18224] Length = 495 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 116/343 (33%), Gaps = 67/343 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI---- 75 D NK FD R + + VD +G S PL +S M + I Sbjct: 145 DANKSCFDWIWFRPRVM--RNVRHVDTRTSIMGVDSSLPLFVSPAA-----MAKLIHPDG 197 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPH----------TVL 119 R +A AA + + V S FS + ++ F +P Sbjct: 198 ERAIAKAAFQKGILQGV-SNNSSFSIEDLAQTAPDGKFFFQLYVSPDRERSAALIRQVSS 256 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN------------GNTN 167 + A+ + D +A + AD P+ + N G+ + Sbjct: 257 LPQFKAIHITVDAAWPGKREADERVKADESASV--PMSDAKAKNDKKGGGIGRLMAGHID 314 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A IA + +P+ LK + +S+ D L +K+G+ ++ GG + Sbjct: 315 PALTWDDIAFVKKHTHLPVCLKGI---MSADDAILAMKAGVDGILLSNHGGRNLDTSP-- 369 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P+ ++L + E + G+R G DILK++ LGA+ Sbjct: 370 ----------------PSIITLLELQRRAPEVFDKMEVYVDSGIRRGTDILKAVALGATA 413 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+ L + V I+ +R E +M G + E Sbjct: 414 VGMGRSMLFATNYGQEGVEHLIDIMRDELETAMRNNGIASLDE 456 >gi|242046290|ref|XP_002461016.1| hypothetical protein SORBIDRAFT_02g039240 [Sorghum bicolor] gi|241924393|gb|EER97537.1| hypothetical protein SORBIDRAFT_02g039240 [Sorghum bicolor] Length = 367 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 112/350 (32%), Gaps = 55/350 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L I ++D S LG + P++++ TG + Sbjct: 32 AEDEYTLRENIAAYGRILLRPRVL--IDVSKIDMSTSLLGYNMPSPIIVAP-TGSHKFAN 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A AA M + S S ++ R + V + Sbjct: 89 PEGEVATARAAAACNTIMVL-SFSSNCRIEEVASSCDAIRFYQLYVYKRRDVSATLVRRA 147 Query: 122 N---LGAVQLNYDFGV---QKAHQAVHVLGADGLFL-HLNPLQEIIQPNG----NTNFAD 170 A+ L D V ++A ++ L L L + G + Sbjct: 148 ESLGFRAIVLTVDTPVLGRREADIRNKMIAPQLSNLEGLMSLDDFDGGEGGSKLERFSRE 207 Query: 171 LSS------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + L S +P+LLK + +++ D ++ G+ ++ G Sbjct: 208 TLDPSLSWKDVEWLKSITSLPILLKGI---VTAEDARKAVEVGVAGVIVSNHGARQLDYA 264 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 PT +LE + + GG+R G D+LK++ LGA Sbjct: 265 P------------------PTISALEEVVKAVAGAVPVLVDGGVRRGTDVLKALALGAKA 306 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P F A IE L KE ++M L G + V E+ Sbjct: 307 VMVGRPVFYGLAARGEAGARHVIEMLNKELELAMALCGCRSVAEVTRAHV 356 >gi|315056647|ref|XP_003177698.1| hypothetical protein MGYG_01764 [Arthroderma gypseum CBS 118893] gi|311339544|gb|EFQ98746.1| hypothetical protein MGYG_01764 [Arthroderma gypseum CBS 118893] Length = 492 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 129/358 (36%), Gaps = 74/358 (20%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R L + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVL--RNVREVNTMSNILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A V + + Sbjct: 198 ELGIARACQSKGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAVQLRECSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLTLPMVPGK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 313 IDPGLTWEDLKWARQHTHLPLLLKGVQ---SADDAVMAMEAGIDGIMLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 + + ++L C E + G+R G DILK+I LGA Sbjct: 370 A------------------SIITLLELHRRCPEIFDRMEIYIDSGIRRGTDILKAICLGA 411 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + G+ FL + + + I+ +R E +M +G + + Y+NTA I H Sbjct: 412 TAVGMGRSFLFASNYGQEGIEHLIDIMRDELEGAMRNIGITSLDQAGPQYVNTADIDH 469 >gi|332705019|ref|ZP_08425104.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] gi|332356196|gb|EGJ35651.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] Length = 353 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 120/368 (32%), Gaps = 70/368 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ L R L + + D S + L + L P+L++ M + + Sbjct: 10 AWDEVTLRENRAGFEQIKLRPRML--VDVSQRDLSTQILDQSLPIPILVAPMA---FQCL 64 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 L A AA + M + + + A+ + +Q T I N QL Sbjct: 65 ANPEGELATARAAAEVGAIMVLSTMSTKPLEAVALAGKQSQQKQEATSEIKNPSWFQLYV 124 Query: 131 DFGVQKAHQAVHVLGA---DGLFLHLNPLQEIIQPNGNTNF------------------- 168 + V A L L ++ + N Sbjct: 125 HRDRTLTRRLVERAEAAGFSALCLTVDAPVLGCRERDRRNQFTLPVGMELANLATMTGLE 184 Query: 169 -------ADLSS-------------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + L S + L S +P+L+K + G D L G Sbjct: 185 IPKTAGESGLLSYFAQQIDPALTWRDLEWLQSITTLPVLVKGILRG---DDALKALDHGA 241 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + ++ GG + D ++ N + GG+R Sbjct: 242 KGIIVSNHGGRQLDSAIASIDALPEV-----------------VAAVGNHLPVLIDGGIR 284 Query: 269 NGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D+LK++ LGAS + P L A+ V ++ LR E ++M L G +V+++ Sbjct: 285 RGTDVLKALALGASAVLVGRPVLWGLAVAGVAGVRHVLQLLRDELDIAMALSGCTKVKDI 344 Query: 328 YLNTALIR 335 + I+ Sbjct: 345 DSSLVKIK 352 >gi|28379893|ref|NP_786785.1| lactate oxidase [Lactobacillus plantarum WCFS1] gi|300769027|ref|ZP_07078917.1| lactate oxidase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308182107|ref|YP_003926235.1| lactate oxidase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28272734|emb|CAD65663.1| lactate oxidase [Lactobacillus plantarum WCFS1] gi|300493439|gb|EFK28617.1| lactate oxidase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047598|gb|ADO00142.1| lactate oxidase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 366 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 122/353 (34%), Gaps = 67/353 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N F+ ++ RAL ++ + G L P++++ + Sbjct: 46 DEWTLKQNTMAFNHVQIVPRAL--TDMEQPSTQTQAFGIDLKTPIMMAP------AAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + AA +A + +S + + + AP + + ++DF Sbjct: 98 LAHARGEAATAEGMAQVGALMAQSTYSSTSIADTAAAGKGAPQFFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNF-------------------ADLSS 173 +AV GA + L ++ + + + NF + Sbjct: 154 QSLLDEAVKA-GAKAIILTVDATVDGYREADIINNFQFPIPMANLTKFSEGDGKGKGIME 212 Query: 174 ------------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ ++P+++K + S D L + +G + ++ GG Sbjct: 213 IYAAAAQKISPADVRRITEYTNLPVIVKGIQ---SPEDALLAIGAGAQGIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ +I A+ I G+R G + K++ GA Sbjct: 270 NGGPASFDVLHEI-----------------AQAVNGRVPIIFDSGVRRGSHVFKALANGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L LA P + A+ + V + + L E ++ M L GTK ++++ L Sbjct: 313 DLVALARPIIYGLALGGAQGVASVVSHLNDELLIDMQLAGTKTIEDVKRAKLL 365 >gi|145609487|ref|XP_001409518.1| hypothetical protein MGG_13441 [Magnaporthe oryzae 70-15] gi|145016849|gb|EDK01279.1| hypothetical protein MGG_13441 [Magnaporthe oryzae 70-15] Length = 365 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 72/352 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL--SFPLLISSMTGGNNK 70 + + ++ F+ L R L + +D S + G ++ S P+ I+ TG + Sbjct: 27 AEDEISMQDPRRIFNRIALRPRIL--RHVETIDTSCSYFGGRIKSSLPIYITP-TGLSRY 83 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + ++ LA A + + + F R P+ L L Sbjct: 84 AHQDGDQCLARACGHEGIVYCMPTTAAH------EAVFGARTT-PNQPLCFQL---YTGR 133 Query: 131 DFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT----------------------- 166 D+ + + V LGA +F+ ++ + + Sbjct: 134 DYDRTRALLRKVERLGAAAIFVTVDSPVIGRRERDDRIKAADGEDPLFAAGVAKSGSMTL 193 Query: 167 -NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 N + L +A +PL+LK V + D L ++G+ ++ GG S + Sbjct: 194 LNPTLTWDDLDWLRAATSLPLVLKGVQ---TVEDAVLAHRAGVDGIVLSNHGGRSQDTAQ 250 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA---------QFIASGGLRNGVDILKS 276 + L+L R + + GG+R G D+LK+ Sbjct: 251 AP------------------MLTLLEIRRHAPHLLAPETRSRFEVFLDGGVRRGTDVLKA 292 Query: 277 IILGASLGGLASPFLKPAMD--SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + LGAS G+ P L + V I LR E +M L G R+ E Sbjct: 293 LALGASAVGVGRPALYSMTNGWGEAGVRRLIMMLRMEIETNMALAGATRLGE 344 >gi|299535032|ref|ZP_07048358.1| hydroxyacid oxidase 1 [Lysinibacillus fusiformis ZC1] gi|298729528|gb|EFI70077.1| hydroxyacid oxidase 1 [Lysinibacillus fusiformis ZC1] Length = 386 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 115/357 (32%), Gaps = 67/357 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + + N+ F+ + ++ R L VD SV GK P L + M G + E Sbjct: 50 EQTLRNNRAAFEKYSIVPRFL--NDVSNVDTSVHLFGKTYPTPFLFAPVGMNGMVHDEGE 107 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNLGAVQ 127 +A AA+ + + +A K F+L + Sbjct: 108 L---AVARAAQFLNTPYIQSTVSTFALEEVAQAAPSATKWFQLYWSTNEEIAF---SMAA 161 Query: 128 LNYDFGVQKAHQAVHVLGA-------------------------DGLF---LHLNPLQEI 159 + G + V + D +F L + + Sbjct: 162 RAEEAGFEAIVLTVDTVMLGWREEDVRNQFSPLKLGYARGNYMNDPVFTASLPDDSFESY 221 Query: 160 IQPNGNTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 +Q F + L ++P+LLK + L D +L + +GI ++ G Sbjct: 222 VQGVLQNVFHPTLNWEHVRELKKRTNLPILLKGI---LHPEDAKLAIDNGINGIIVSNHG 278 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D I A+ + I G+ G+D LK++ Sbjct: 279 GRQLDGVIGSLDALPAI-----------------AKVVNRQIPIILDSGVYRGMDALKAL 321 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + PF+ A++ V + +L E VS+ L G V+ L T + Sbjct: 322 SLGADAVAIGRPFVYGLALEGQQGVEKVMTNLYDELKVSIALAGATSVKGLRNITLV 378 >gi|331222371|ref|XP_003323859.1| L-lactate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302849|gb|EFP79440.1| L-lactate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 494 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 110/339 (32%), Gaps = 49/339 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK----KLSFPLLISSMTGGNNK 70 + + N+ F R L +D S E LG KL P K Sbjct: 141 DEISLRENRAAFQRVWFRPRIL--RDVRRIDYSCELLGSTALGKLGHP--------EGEK 190 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLIS-NLG 124 + I +A + V + + +++ R+ +L + G Sbjct: 191 NLTIAAGQEGIIQMIPTLASCAFEELVQARAESQNQWYQVYVNQDREKTKKLILKAERAG 250 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-------------- 170 + + + + + ++ Sbjct: 251 IKAFFITVDAPQLGRREKDMRLKLCIMFEDLGSDVQNKENEKVDRSQGATRAISSFIDAS 310 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I L S +P+LLK V S D + + G++ ++ GG S + Sbjct: 311 LSWDDIPWLRSITKLPILLKGVQ---SWEDAVMAKERGLQGIVLSNHGGRQLDYSRSGLE 367 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ ++ G E GG+R D+LK++ LGA+ GL P Sbjct: 368 VLVEVVDKLRELG----------SWNPREFGVFMDGGVRRASDVLKALCLGATGVGLGRP 417 Query: 290 FLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 FL ++ S VV AI+ L+ E ++M L+G + +L Sbjct: 418 FLYAYSVYGSQGVVRAIQILKDEMEMNMRLIGAPTLADL 456 >gi|239629648|ref|ZP_04672679.1| lactate oxidase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239528334|gb|EEQ67335.1| lactate oxidase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 368 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 123/343 (35%), Gaps = 68/343 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 RN F D ++ R L ++ D S F+G +L+ PLL + + G + + L Sbjct: 52 RNTTAFTDVQMLPRVLQG--VEKPDQSTTFMGARLASPLLTAPIAG---NTLAHPSGELG 106 Query: 80 -AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A A++ + M SQ F+ ++ + AP+ + + + + +A Sbjct: 107 LAKGAKEAGIMM---SQS-TFASKTIAETAAVSDGAPYMFQLY-MPKDWSYCQYLLDQAK 161 Query: 139 QAVHVLGADGLFL------------------HL----------NPLQEIIQPNG---NTN 167 QA GA + L HL N Q+ + G + Sbjct: 162 QA----GALAIILTADSTLGGYREKDVMNHYHLKGRLANLEGYNTGQQGVGAGGLFKESM 217 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + I L+S +P+++K + D + +G ++ GG Sbjct: 218 QKLDLATIDKLASYSGLPIIVKGIQH---PDDAVAAITAGAAGIYVSNHGGRQLDGAPGA 274 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + I + I GG++ G +LK++ LGA L G+ Sbjct: 275 IEALPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGADLVGIG 317 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 PF A+ + V A + ++ E ++M L G + + ++ Sbjct: 318 RPFSYGLALGGWEGVKAVADHMKMEINIAMQLTGCQTMADVKQ 360 >gi|302405553|ref|XP_003000613.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261360570|gb|EEY22998.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 486 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 110/350 (31%), Gaps = 81/350 (23%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA--IAAEK 85 + R L + V+ LG K + P I+ + + LA A+ Sbjct: 148 RIMIRPRIL--RNVTSVNMKTSILGFKSTAPFFIAPAA---MARLVHPDGELALSRASAN 202 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQ---YAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + S S+ LR AP T + + A Sbjct: 203 EGIIQCISSN----------ASYTLRSIMTAAPATQPFFFQLYINSERQKTIDILKSA-R 251 Query: 143 VLGADGLFLHLNPL------------------QEIIQPNGNTNFAD-------------- 170 LG +F+ ++ I + + Sbjct: 252 SLGIKAIFVTVDAPVPGKREADERAAQAVTVRSAISGGESSKDKKGSGLGRLMAQYIDKS 311 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++ + A VP++LK V ++ D ++ + G+ ++ GG S ++ Sbjct: 312 LTWDDLSWIREASGVPIVLKGVQ---TADDAKMAVDYGVDAILLSNHGGRSLDGSQA--- 365 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 + L L R +C E + GG G DILK++ LGA+ G Sbjct: 366 ---------------SILVLMELRKHCPEVFEKLEVYVDGGFERGSDILKAVALGATAVG 410 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + P L + + V ++ L+ E SM L G + E AL+ Sbjct: 411 IGRPTLYSLVYGQEGVEHLVQILKDELETSMRLCGITSLDE--ATPALVN 458 >gi|255933333|ref|XP_002558137.1| Pc12g13290 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582756|emb|CAP80956.1| Pc12g13290 [Penicillium chrysogenum Wisconsin 54-1255] Length = 488 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 130/383 (33%), Gaps = 94/383 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + L R L +I V+ + LG + P+ IS + G K+ Sbjct: 134 ADDEISKRNNALAYQKISLRPRILRKI--PAVNTTAAILGYSTTLPVYISPV--GLAKLA 189 Query: 73 ERINR-NLAIAAEKTKVA--MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 LA AA K ++ +A GS + +KS + +P + L V + Sbjct: 190 HPQGECALAAAAGKDRLVQVLANGSSMPI---EQVMKS----RTSPSQPIFQQL-YVNKD 241 Query: 130 YDFGVQKAHQAVHVLGADGLFLHL-----------------------------------N 154 V+ +A GA +++ + N Sbjct: 242 IKKSVETVRRA-ERAGASAIWITVDSPMVGKREMDERLNLRVTVWTLPSRYHWAVIAFTN 300 Query: 155 PLQEI-----------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 Q I + + F D + L D+P+++K + C D L Sbjct: 301 VFQATDNNTEGQGVAKIMASSISPFIDW-EILTWLRQLTDLPVVIKGIQC---VEDAVLA 356 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----E 258 + G++ ++ GG S L+L R + + Sbjct: 357 YQHGVQGIVLSNHGGRSQDTA------------------QSPLLTLLEIRKFAPHLIESK 398 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMF 317 Q GG+R G D+LK+I LGA+ GL PFL + V IE LR+E +M Sbjct: 399 MQIFIDGGIRRGTDVLKAIALGATAVGLGRPFLFSLSGYGEKGVRRMIEILRQEIETNMV 458 Query: 318 LLGTKRVQELY----LNTALIRH 336 LG ++EL + L +H Sbjct: 459 FLGASSLEELRPEMVNTSRLEKH 481 >gi|225707262|gb|ACO09477.1| Hydroxyacid oxidase 1 [Osmerus mordax] Length = 369 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 113/362 (31%), Gaps = 78/362 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + W L+ R L +D S LG+ +S P+ + + +M Sbjct: 31 ADEQETLADNTAAYSRWRLLPRVL--RDVSRMDLSASVLGQPISMPVCVGATA--MQRMA 86 Query: 73 ERINRNLAIAAEKT-KVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 A + M + S E+R A +L L + + Sbjct: 87 HPEGETATARACRAAGTGMMLSSWATSTIE--------EVRSSAGEGLLWMQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHL-------------------------NPLQE---IIQP 162 D + +A G +F+ + N Sbjct: 138 DLTLSLVRRA-EEAGYKAIFVTVDTPYLGKRRDDVRNRFKLPSHLRMSNFASADLAFSSE 196 Query: 163 NGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 G + L IA L + +P+++K V LS+ D ++ G+ Sbjct: 197 EGYGEDSGLAVYVSQAIDPTLCWEHIAWLKAHTHLPVVVKGV---LSAEDALQAVQFGVD 253 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + + ++ ++ + GG+R Sbjct: 254 GILVSNHGARQLDGVPATLEVLEEV-----------------VAAVAGRCEVYLDGGVRR 296 Query: 270 GVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D+LK++ LGA+ L P L A V +E R E ++M L G + V E+ Sbjct: 297 GTDVLKALALGATAVFLGRPILWGLACQGEQGVTDVLELFRDELHLAMALAGCRSVGEVS 356 Query: 329 LN 330 + Sbjct: 357 RS 358 >gi|258507702|ref|YP_003170453.1| L-Lactate dehydrogenase [Lactobacillus rhamnosus GG] gi|257147629|emb|CAR86602.1| L-Lactate dehydrogenase [Lactobacillus rhamnosus GG] gi|259649049|dbj|BAI41211.1| L-lactate dehydrogenase [Lactobacillus rhamnosus GG] Length = 368 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 123/349 (35%), Gaps = 72/349 (20%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + RN F D H++ R L + D S F+G KL+ PLL + + G + + Sbjct: 48 YTMHRNTTAFQDVHMLPRVLQG--VENPDQSTTFMGAKLASPLLTAPIAG---NTLAHPS 102 Query: 77 RNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 L A A++ + MA + F+ ++ + AP+ + + + + Sbjct: 103 GELGLAKGAKEAGIMMA----QSTFASKTIAETAAVSDGAPYMFQLY-MPKDWEYCKYLL 157 Query: 135 QKAHQAVHVLGADGLFL------------------HL----------NPLQEIIQPNGNT 166 +A QA GA + L HL N Q + G Sbjct: 158 DEAKQA----GALAIILTADSTLGGYREKDVMNHYHLKGRLANLEGYNTGQSGVGAGGL- 212 Query: 167 NFADLSSK-----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 F + K I+ L+S +P+++K + D + +G ++ GG Sbjct: 213 -FKESMQKLDLGLISKLASYSGLPIIIKGIQH---PADAVAAITAGAAGIYVSNHGGRQL 268 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + I + I GG++ G +LK++ LGA Sbjct: 269 DGAPGAIEQLPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGA 311 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L G+ PF A+ V + L+ E ++M L G + + ++ Sbjct: 312 DLVGIGRPFSYGLALGGWQGVKDVADHLKMEINIAMQLTGCQTMADVKQ 360 >gi|157106990|ref|XP_001649576.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] gi|108879712|gb|EAT43937.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] Length = 364 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 118/342 (34%), Gaps = 61/342 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER---INRNLAIA 82 FD + R L S + D SV G + S P+ IS +M + + A A Sbjct: 42 FDRLRIRPRVLK--SGSKRDLSVNLFGDRYSMPIGISPTA--MQRMAHPEGEVANSKAAA 97 Query: 83 AEKTKVAMAVGSQRVMFS----DHNAIKSFEL-----RQYAPHTVLISN---LGAVQLNY 130 + ++ S M + K F+L R+ V + A+ L Sbjct: 98 SRGVGFTLSTISTSSMEQVATGTPGSPKWFQLYIYRDRKLTESLVRRAEKAGFKAIVLTV 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL------------------NPLQEIIQPNGNTNFADLS 172 D + +A + L HL + + E I + + Sbjct: 158 DAPMFGLRRA-DMRNKFSLPPHLVLANFEGRLATGVQSQGGSGINEYITEQLDPTLSW-- 214 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + L + +P+++K + L+ D + G++ ++ G + + + Sbjct: 215 DDVKWLVNFTRLPVIVKGI---LTQEDAVIAADMGVQGIWVSNHGARQLDSVPASIEALP 271 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I + + + GG+ G D+ K+I LGA + P L Sbjct: 272 EI-----------------VKAVGDRTTIVMDGGVTEGTDVFKAIALGAKMVFFGRPALW 314 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A++ V ++ LRKE V+M L G + + ++ N + Sbjct: 315 GLAVNGQQGVEHVLDLLRKELDVAMALAGCQTIGDITPNHVV 356 >gi|224074049|ref|XP_002304230.1| predicted protein [Populus trichocarpa] gi|222841662|gb|EEE79209.1| predicted protein [Populus trichocarpa] Length = 364 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 119/351 (33%), Gaps = 59/351 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N + F L+ R L + + S LG +S P++I+ + + Sbjct: 31 AEDEHTLKKNVQEFQRIILLPRVL--VDVSSIALSTNILGYTISAPIMIAP---TSMHKL 85 Query: 73 ERINRNLAIAAEKT---KVAMAVGSQRVMFSD----HNAIKSFELRQYAPHTVLISNL-- 123 LA A + M + + +A++ F+L + NL Sbjct: 86 AHPEGELATARAAAACNTIMMLSFTASCSVEEVAASCDAVRFFQL-YVCKRRDIAVNLVQ 144 Query: 124 -------GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI------------IQPNG 164 A+ L D + +A + + L L+ + I+PN Sbjct: 145 RAEKSGYKAIVLTADRPRRGRKEA--DIKNKMILPQLKNLEGLMSIEVFSDKGSNIKPNT 202 Query: 165 NTNF--ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N F + IA L S +P+L+K + L+ D ++ G ++ G Sbjct: 203 NEIFDPSLCWRDIAWLKSITSLPILIKGI---LTREDAIKAMEVGAAGIIVSNHGARQLD 259 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + ++ + + GG+R G D+ K++ LGA Sbjct: 260 YTPATISVLEEV-----------------VQAVGRRVPVLLDGGVRRGTDVFKALALGAQ 302 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A V + L+ E ++M L G V+++ + Sbjct: 303 AVLVGRPVIYGLAAKGEAGVRKVMHMLKDELELTMALAGCPSVKDISRSHV 353 >gi|169766604|ref|XP_001817773.1| cytochrome B2 [Aspergillus oryzae RIB40] gi|83765628|dbj|BAE55771.1| unnamed protein product [Aspergillus oryzae] Length = 480 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 125/344 (36%), Gaps = 67/344 (19%) Query: 31 LIHRA-LPE----ISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRNLAIA 82 LI+R+ LP I E D S FLG KL P+ IS +M + + I A A Sbjct: 143 LIYRSILPRPRVFIDCRECDLSTRFLGLKLGLPIYISPAAMARLAHPQGEAGI----AAA 198 Query: 83 AEKTKV-------AMAVGSQRVMFSDHNAIKSFE------LRQYAPHTVLISNLGAVQ-- 127 K A Q V + + I ++ +++ I+++ ++ Sbjct: 199 CRKFGAMQLISHNASMTTQQIVANAHPDQIFGWQLYCLKDVKRSEKRIAEINSIKEIKFI 258 Query: 128 -LNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 L D G ++ + + L+P Q G + L Sbjct: 259 CLTLDAPFPGKREIEERQKMEELRAAGAVLSP-----QVWGTDASLTWERTLNWLRMHTS 313 Query: 184 VPLLLKEVGCGLSSMDIELGLKS--GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P++LK + + D L K +R ++ GG + + + + Sbjct: 314 LPIVLKGIQ---TYEDAILAAKHAPQVRGIVLSNHGGRALDTVSTPVHV----------- 359 Query: 242 GIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMD 296 L R +C E I GG++ G D++K++ LGA G+ L A Sbjct: 360 -------LLEIRRFCPEVFDRLDVIVDGGIQRGTDVVKALALGAKAVGIGRAALYGLAAG 412 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 V ++ L E +M LLG + V +L ++NT L+ Q Sbjct: 413 GQSGVERTLQILADETATAMRLLGVQHVDQLSLQHVNTRLVDSQ 456 >gi|291523130|emb|CBK81423.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Coprococcus catus GD/7] Length = 337 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 110/319 (34%), Gaps = 46/319 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN-----NKMIERI 75 RN + + + + L + VD S+E GKK +P + G + + + Sbjct: 47 RNYQKWQEIRVNMDTL--CAPKAVDTSLELFGKKFKYPFFAGPV--GAVNLHYSDAYDDV 102 Query: 76 --NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 N+ L A + + G ++ + + A + ++ V + Sbjct: 103 SYNKVLVSACAENGIVAFTGDG----TNPK------VMEAATDAIALAGGMGVPTVKPWN 152 Query: 134 VQKAHQ---AVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLK 189 + + V GA + + ++ N + + ++ P ++K Sbjct: 153 LDTIREKMDLVKKSGAFAVAMDVDAAGLPFLKNMDPPAGGKSVEDLKAIAEMAGAPFIVK 212 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V ++ ++G ++ GG + + ++ +I Sbjct: 213 GV---MTVKGALKAKEAGAAAIVVSNHGGRVQDQCPATAEVLPEI--------------- 254 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESL 308 + + GG+R+GVDI K++ LGA +A PF+ + V A I+ L Sbjct: 255 --VKAVGGSMKIFVDGGIRSGVDIFKALALGADAVIIARPFVTAVYGGAEEGVKAYIDKL 312 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M + G + E+ Sbjct: 313 AGELADTMAMCGAFSLDEI 331 >gi|313115530|ref|ZP_07800990.1| dehydrogenase, FMN-dependent [Faecalibacterium cf. prausnitzii KLE1255] gi|310622129|gb|EFQ05624.1| dehydrogenase, FMN-dependent [Faecalibacterium cf. prausnitzii KLE1255] Length = 339 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 109/321 (33%), Gaps = 49/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + + + L E D +E GK +P + N E Sbjct: 47 RNYNKWAEIRVNMDTLCEGGT--PDTHIELFGKSFKYPFFAGPVGAVNLHYSEAYTDMTY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A + +A G ++ + + A + +N V + + Sbjct: 105 NDVLVRACAENGIAAFTGDG----TNP------TVMEMATKAIGAANGCGVPTIKPWNID 154 Query: 136 KAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + + A G F L L+ + P G+ + A+L A + + P + Sbjct: 155 TIKEKMAEAKASGCFAVAMDVDAAGLPFLKNMTPPAGSKSVAEL----AEIVKLAERPFI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +K V ++ ++G ++ GG + + ++ +I + G Sbjct: 211 VKGV---MTVKGALKAKEAGAAAIVVSNHGGRVLDQCPATAEVLPEIAAALKGTG----- 262 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 + + GG+R GVD+ K++ LGA + PF+ + V I+ Sbjct: 263 -----------VKILVDGGIRTGVDVFKALALGADGVLICRPFVTAVYGGGEEGVKCYID 311 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L E +M + G + E+ Sbjct: 312 KLAGELADTMQMCGAHSLAEI 332 >gi|224074051|ref|XP_002304231.1| predicted protein [Populus trichocarpa] gi|222841663|gb|EEE79210.1| predicted protein [Populus trichocarpa] Length = 370 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 114/354 (32%), Gaps = 59/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N + F L+ R L + ++ S LG +S P++I+ + + Sbjct: 31 ADDEHTLKKNVQEFQRIILLPRVL--VDVSKIALSTNILGYTISAPIMIAP---TSMHKL 85 Query: 73 ERINRNLAIAAEKTK-------VAMAVGSQRVMFSDHNAIKS-----------FELRQYA 114 LA A ++ S S S ++ R A Sbjct: 86 AHPEGELATARAAAACNTIMRFISFQTLSFGASCSVEEVAASCDAVRFFQLYVYKRRDIA 145 Query: 115 PHTVLIS-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ------------ 161 + V + G + V + + + + L L+ ++ Sbjct: 146 VNLVQRAEKSGYKAIVLTADVPRLGRREADIKNKMIVPQLKNLEGLMSTEVVSVKGSNFE 205 Query: 162 --PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 N + + IA L S ++P+L+K + L+ D ++ G ++ G Sbjct: 206 AYANETIDSSLCWRDIAWLKSTTNLPILIKGI---LTREDAIKAMEVGAAGIIVSNHGAR 262 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + ++ + + GG+R G D+ K++ L Sbjct: 263 QLDYTPATISVLEEV-----------------VQAVGRRVPVLLDGGVRRGTDVFKALAL 305 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 GA + P + A V + L+ E ++M L G V+++ + Sbjct: 306 GAQAVLVGRPVIYGLAAKGEAGVRKVMHMLKDELELTMALAGCPSVKDISRSHV 359 >gi|158320194|ref|YP_001512701.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alkaliphilus oremlandii OhILAs] gi|158140393|gb|ABW18705.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alkaliphilus oremlandii OhILAs] Length = 338 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 48/305 (15%) Query: 44 VDPSVEFLGKKLSFPLL---ISSMTGGNNKMIERINRNLAIA--AEKTK-VAMAVGSQRV 97 +D S+E G+K ++P+ I ++ + ++ AI ++ + + Sbjct: 68 IDTSIELFGQKFTYPVFAAPIGAVGLNYSPALDDFEYTKAIIGGCKEAGVIGFTGDGVKD 127 Query: 98 MFSDHNAIKSFELRQYAPHTV-------LISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 F D +++ H + + ++ + G + G L Sbjct: 128 EFYDLPLQ---VVKENNGHGIPTIKPWKKEEIIAKIKKAEENGAPAVAMDIDAAGLVTLA 184 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 L P+ + + S+ +P++LK V ++ + LK+G Sbjct: 185 LLGKPV-----------GTKSIEDLKEIISSTKLPVILKGV---MTVEGAKKALKAGAYG 230 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + ++ I + GG R G Sbjct: 231 IVVSNHGGRVLDHTPATIEVLPAIAD-----------------AVKGRMKIFVDGGFRTG 273 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +DI K+I LGA + P+ A + V E + E +M + G + ++ Sbjct: 274 LDIFKAIALGADAVLIGRPYAVAAYGGGAEGVKVYTEKIGNELKETMIMAGCHNLADIKR 333 Query: 330 NTALI 334 + + Sbjct: 334 DRVFL 338 >gi|260803691|ref|XP_002596723.1| hypothetical protein BRAFLDRAFT_101689 [Branchiostoma floridae] gi|229281982|gb|EEN52735.1| hypothetical protein BRAFLDRAFT_101689 [Branchiostoma floridae] Length = 370 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 119/326 (36%), Gaps = 62/326 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTG-GNNKMIERINRNLAIAAEKTKVAMAVGSQR------V 97 D S LG ++ P+ IS G I A A+ + + M + + Sbjct: 62 DMSTTLLGHRVDMPIGISPTANQGLASPQGEIGT--AKASAQFQTCMICSTYSNFTMENI 119 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNL---------GAVQLNYDFGVQKAHQAVHVLGADG 148 M S + +K F+L P + L A+ L D + + + Sbjct: 120 MDSSPDGLKWFQL-YVRPDRATTAGLVRRAEQAGYKALVLTVDLPI-VGRRYPDMRHGFS 177 Query: 149 LFLHLNPLQ-------------------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + HL + P+ +++ + +A L S +P++LK Sbjct: 178 MPRHLRVANLGNADLSKSKKDRSGALDYGLGGPDQSSDVSLSWKDVAWLRSICSLPIILK 237 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + L++ D L ++ G+ ++ GG + + + +I Sbjct: 238 GI---LTAEDTRLAVQHGVDGILLSNHGGRQLDGVPATIEALPEI--------------- 279 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESL 308 + ++ + GG+R G D+LK++ LGA + P + + V + L Sbjct: 280 --VQAAGDKLEVYMDGGVRTGTDVLKALALGARAVFIGRPAVWGLCYKGQEGVAKVLSIL 337 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALI 334 ++EF ++M L G + ++++ AL+ Sbjct: 338 KEEFSLAMALSGCRSLRDI--TPALV 361 >gi|283850740|ref|ZP_06368027.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio sp. FW1012B] gi|283573983|gb|EFC21956.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio sp. FW1012B] Length = 342 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 104/312 (33%), Gaps = 36/312 (11%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN--- 78 N + + L R L + D +V G++LS P+L + MTG M R++ Sbjct: 48 NLQALCAYRLNMRTLHGVRTA--DTTVNLFGRELSMPVLAAPMTGVLYNMGGRLSEEDFI 105 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 +A A + M+ D S A + + + Sbjct: 106 RTIVAGAKAAGTLGMSGDGA-----DPAMFDSGLAAIAAAGGHGVPFIKPR--AQEAVKA 158 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 +A ++ G +++A L S +P ++K + + Sbjct: 159 LLKKAQAAGAVAAGVDVDGAGLAVMALKGQPVSPKTPAELAELISGTTLPFVVKGI---M 215 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + + L +G ++ GG ++ GI R Sbjct: 216 TPDEARLAFDAGAAAIVVSNHGGRVLDHTPGAAEVLP---------GI--------VRAV 258 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIV 314 +A GG+R G D+LK + LGA + P + A + V ++ LR E Sbjct: 259 KGRGVILADGGVRTGADVLKYLALGADAVLVGRPLVTGAFGGGAEGVAFLLQKLRAELAS 318 Query: 315 SMFLLGTKRVQE 326 +M L GT V+E Sbjct: 319 AMLLTGTASVRE 330 >gi|170057205|ref|XP_001864380.1| peroxisomal [Culex quinquefasciatus] gi|167876702|gb|EDS40085.1| peroxisomal [Culex quinquefasciatus] Length = 364 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 119/347 (34%), Gaps = 65/347 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N+ FD + R L S D +VE G+K S P+ IS +M + E N Sbjct: 38 NRIAFDRIRIRPRVL--NSGASRDMTVELFGEKFSMPIGISPTAMQRMAHPEGEVAN--- 92 Query: 80 AIAAEKTKVAMAVGS------QRVMFSDHNAIKSFELRQYAPHTVLISNL---------G 124 A AA + + + ++V + K F+L L NL Sbjct: 93 AKAAASRGIPFTLSTIATSSIEQVAAGAPRSPKWFQL-YIYKDRKLTENLVRRAEKAGFK 151 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLH------------------LNPLQEIIQPNGNT 166 A+ L D + +A + L H + + E I + Sbjct: 152 ALVLTVDAPMFGLRRA-DMRNKFSLPSHYVLANFDGHLATGVQSQGGSGINEYITEQLDP 210 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + L +P+++K + L+ D + G+R ++ G + + Sbjct: 211 TLSW--KDVEWLVKFTKLPVIVKGI---LTKEDAIIAADYGVRGIWVSNHGARQIDSVPA 265 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + +I + + GG+ G D+ K++ LGA + Sbjct: 266 SIEALPEI-----------------VAAVGDRTTIVLDGGVTEGTDVFKALALGAKMAFF 308 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 P L A++ V ++ LRKE V+M L G + V ++ N Sbjct: 309 GRPALWGLAVNGQQGVEHVLDILRKELDVAMALAGCRCVADITRNHV 355 >gi|15231850|ref|NP_188060.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|30683149|ref|NP_850584.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|297829994|ref|XP_002882879.1| hypothetical protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp. lyrata] gi|13124262|sp|Q9LRR9|GLO1_ARATH RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; AltName: Full=Glycolate oxidase 1; Short=AtGLO1; Short=GOX 1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO1 gi|16226423|gb|AAL16164.1|AF428396_1 AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|11994212|dbj|BAB01334.1| glycolate oxidase [Arabidopsis thaliana] gi|15450741|gb|AAK96642.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|18491119|gb|AAL69528.1| AT3g14420/MOA2_2 [Arabidopsis thaliana] gi|297328719|gb|EFH59138.1| hypothetical protein ARALYDRAFT_478862 [Arabidopsis lyrata subsp. lyrata] gi|332641997|gb|AEE75518.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] gi|332641999|gb|AEE75520.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 367 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 117/370 (31%), Gaps = 98/370 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 87 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAER 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + K +A Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNF------EGLDLGKMDEAND 196 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + + + + L + +P+L+K V L+ D + Sbjct: 197 SGLASYVA-----------GQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDARI 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRIPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSG 342 Query: 321 TKRVQELYLN 330 + ++E+ N Sbjct: 343 CRSLKEISRN 352 >gi|319781875|ref|YP_004141351.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167763|gb|ADV11301.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 382 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 123/373 (32%), Gaps = 73/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN + F+ L+ L EVD SV +G+KL+ P S T Sbjct: 33 ADDEVTYRRNTESFETCDLVPNVLRG--VSEVDMSVTVMGQKLAMPFYCSP-TALQRLFH 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNY 130 + R +A AA K V S V + +I S ++ Q+ H N +Q Sbjct: 90 HQGERAVAKAAAKYGTMFGVSSLGTVSLEEARSISSGPQVYQFYFHRDRGLNRAMMQRAK 149 Query: 131 DFGVQ--------------------------------KAHQAVHVLGADGLFLH----LN 154 GV+ A A+ A F H L Sbjct: 150 AVGVEVMMLTVDSITGGNRERDKRTGFAIPFKLNLTGMAQFALKPAWAINYFTHEGFKLP 209 Query: 155 PLQEIIQPNG-----NTNFADLSS------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L E + G + F ++ +A + P LK V +S D + Sbjct: 210 QLDEHVDMGGGTMSISRYFTEMLDPSMTWDDVAEMVKLWSGPFCLKGV---MSVEDAKRA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + G ++ GG + D ++I + I Sbjct: 267 VDIGCSGIVLSNHGGRQLDGSRAAFDQLAEI-----------------VDAVGDRIDVIM 309 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG++ G +LK++ LGA G+ +L P A V A+E +R E M L+G Sbjct: 310 DGGVQRGTHVLKALSLGAKAVGVGRYYLFPLAAAGQPGVERALEQMRVEIERGMKLMGCS 369 Query: 323 RVQELYLNTALIR 335 +++L N R Sbjct: 370 SIEQLSRNNLRFR 382 >gi|79313229|ref|NP_001030694.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|222424496|dbj|BAH20203.1| AT3G14420 [Arabidopsis thaliana] gi|332642000|gb|AEE75521.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 348 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 117/370 (31%), Gaps = 98/370 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++++ Sbjct: 10 AEDQWTLQENRNAFARILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHP 67 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 68 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAER 127 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + K +A Sbjct: 128 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNF------EGLDLGKMDEAND 177 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + + + + L + +P+L+K V L+ D + Sbjct: 178 SGLASYVA-----------GQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDARI 221 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 222 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRIPV 263 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 264 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSG 323 Query: 321 TKRVQELYLN 330 + ++E+ N Sbjct: 324 CRSLKEISRN 333 >gi|297180307|gb|ADI16525.1| l-lactate dehydrogenase (fMn-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured bacterium HF4000_009C18] Length = 386 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 119/384 (30%), Gaps = 98/384 (25%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SM-------- 64 + + RN + F+D L+ L +D S G+K+ FPL +S +M Sbjct: 34 DEVTLKRNTESFNDCDLVPNVLS--DVSNIDLSTTVFGQKIDFPLFLSPTAMHRLYHHHG 91 Query: 65 -------------------------------TGGNN------KMIERINRNLAIAAEKTK 87 TGG + NL ++ Sbjct: 92 ESAAAKAAEKMGTMFSMSTMSTTSIEEIGNLTGGPKLFQLYIHKDRGLTDNLIERCQRAG 151 Query: 88 ---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + V + + + F P + + +L + L+ ++ + + L Sbjct: 152 FHGLCLTVDTVVAGNRERDHRTGFT----TPPRLTLGSLLSFALHPEWSLNYLFRGKFKL 207 Query: 145 GADGLFLHL------------NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 +H+ N + E Q + N+ D P LK V Sbjct: 208 ---ANIIHMTEKGSNIDKSIMNYINE--QFDTTMNWKD----AEYCVKKWRGPFALKGV- 257 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 +S D + + G I+ GG + D ++I Sbjct: 258 --MSVEDAKKAIDIGASAIMISNHGGRQLDGSRAPFDQLAEI-----------------V 298 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKE 311 ++ + I GG+R G +LK++ LGA +L + +E ++ E Sbjct: 299 DAVGDKIEIILDGGVRRGTHVLKALALGAKACSFGKAYLYALGAGGQKAIEIVLEKMKSE 358 Query: 312 FIVSMFLLGTKRVQELYLNTALIR 335 M L+G K V+EL + R Sbjct: 359 IKRDMILMGCKSVKELNRSKVAFR 382 >gi|159128535|gb|EDP53650.1| short chain alpha-hydroxy acid oxidase, putative [Aspergillus fumigatus A1163] Length = 408 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 108/381 (28%), Gaps = 95/381 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ ++ + + R L + +D S +G K+ FP S + + Sbjct: 50 AMDLITLRENESAYNRYMIRPRVL--RNLSTIDTSTTIVGCKVKFPFGFSPTA---MQTL 104 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A M + + + S + P+ + +S L N Sbjct: 105 AHPDGEEGTSKACANFNTLMGLSNYATKNLEQVIAHS----KGNPYVMQMSLL----KNK 156 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP------LQEIIQ----PNGNTN---FAD------- 170 +Q +A G LF+ L+ L E P G F Sbjct: 157 AAMIQVIKRA-DAAGFKALFVTLDVPYLGRRLNEYRNNFGVPKGMEYPNLFPGVDVTNLE 215 Query: 171 -------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + ++ + K + ++ D EL +K G I+ G Sbjct: 216 DGDESMAYDNSLEWPDIVPFIRQYTNMQIWGKGI---YTAADAELAIKYGFDGIIISNHG 272 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + + D+ +I V + GG+R G DI K++ Sbjct: 273 GRQLDSVPASLDVLREIAPV-----------------AKGKIPIAVDGGIRRGTDIFKAL 315 Query: 278 ILGASLGGLASPFLKPA--------------------------MDSSDAVVAAIESLRKE 311 LGA P + D V A+ L E Sbjct: 316 ALGADFCLAGRPAIWGLAVCLLSSFFSQFHQSHKVASLTDWFQYDGQKGVELALNLLYDE 375 Query: 312 FIVSMFLLGTKRVQELYLNTA 332 F M L G K V E+ Sbjct: 376 FKTCMALAGCKNVSEIQKEHV 396 >gi|157106968|ref|XP_001649565.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] gi|108879701|gb|EAT43926.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] Length = 389 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 122/351 (34%), Gaps = 54/351 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ ++ + R L + D V+ G++ + P+ IS KM Sbjct: 30 ADDEQTRQLNRSSYERLRIRPRMLQ--NVSNRDMKVKLFGEEYAMPIGISPTA--FQKMA 85 Query: 73 ER---INRNLAIAAEKTKVAMAVGSQRVMFSD----HNAIKSFEL-----RQYAPHTVLI 120 + A A K ++ S + + K F+L R+ V Sbjct: 86 HPEGEVANARAAANRKLLFTLSTLSNSSIEEVADAVPKSPKWFQLYIYKERKLTERIVQR 145 Query: 121 SN---LGAVQLNYDFGVQKAHQA-------------VHVLGADGLFLHLNPLQEIIQP-N 163 + A+ + D + +A L + + + Q Sbjct: 146 AKKAGFKAIVVTVDSPLFGKRRADIRNRFSLPPGLKAANLEGEQAIIQGKDGSGLSQYGE 205 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + + I L ++P+L+K + L+ D E+ + G+ ++ GG Sbjct: 206 QQLDPSLVWDDIRWLIKISELPVLVKGI---LTKEDAEIAVSKGVSGIWVSNHGGRQLDS 262 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + ++ +I ++ I GG+RNG D+ K++ LGA++ Sbjct: 263 APATIEVLPEI-----------------VAAVGDQTTIIVDGGVRNGKDVFKALGLGANM 305 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P L A++ V ++ LR E +M L G +RV ++ + Sbjct: 306 VMIGRPALWGLAVNGQQGVEQVLDILRDELDTTMALAGCQRVADITRLHVI 356 >gi|260827493|ref|XP_002608699.1| hypothetical protein BRAFLDRAFT_278411 [Branchiostoma floridae] gi|229294051|gb|EEN64709.1| hypothetical protein BRAFLDRAFT_278411 [Branchiostoma floridae] Length = 363 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 118/343 (34%), Gaps = 67/343 (19%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE 73 C + NK+ F + L+ R L VD + LG +L P+ +S + + Sbjct: 40 CSGFTLQENKRAFQRYRLLPRVL--RDVSSVDTTATVLGSRLDMPVALSPTA---HHSLA 94 Query: 74 RINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A A A A V S F++H+ + Q AP V L N Sbjct: 95 HPDGEKATAKGAASANTAYVVSS----FANHSLED---IAQAAPGGVRWFYLIPQ--NDP 145 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------PLQEIIQPNGN----TNFADL 171 ++ + V G G++L ++ + PN A Sbjct: 146 GRTKELLRRVESAGYSGIWLTVDQPRFQFQQRPESNLESAASVMRLPNLTFEDVPGDASS 205 Query: 172 SSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDIAGRGG 218 LS + P+ ++V L++ D + ++ + ++ GG Sbjct: 206 QEFTTYLSDNVRQPITWEDVVWLRKNTQLKIVLKGILTAEDAKEAVRVSVDGICVSNHGG 265 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + + D ++ R +A+ GG+R G D+LK++ Sbjct: 266 RQLDGVPATIDALPEV-----------------VRAVDGKAEVYLDGGVRTGTDVLKALA 308 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 LGA + P L A + ++ V +E L+ + ++M G Sbjct: 309 LGARCVFIGRPALWGLACNGAEGVRQVLEVLKDQLNLAMAQTG 351 >gi|328767351|gb|EGF77401.1| hypothetical protein BATDEDRAFT_30699 [Batrachochytrium dendrobatidis JAM81] Length = 491 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 119/347 (34%), Gaps = 49/347 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N F L R + + V+ S LG S P+ I++ G E Sbjct: 136 DELTLQENHAAFHRIWLRPRVM--VDVKTVNVSTTMLGVPSSLPIYITATALGKLGHPEG 193 Query: 75 INRNLAIAAEKTKVAMAVGS---------------------QRVMFSDHNAIKSFELRQY 113 L AA + + + Q + S+ + ++ +R+ Sbjct: 194 -EVVLTRAAGAKGIIQMIPTLASCSFMDLVGAKCQGQSQFFQLYVNSNPSITENL-IRRA 251 Query: 114 APHTV--LISNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + + L + A QL D ++ + + D N L + + Sbjct: 252 EANGIKGLFITVDAPQLGRREKDMRLKFINDTPDAIDPDT--PRTNNLGAARAISHFIDP 309 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESH 227 + + S +P++LK + G D + KSG + I+ GG S Sbjct: 310 SLSWKDLDWFRSITTLPIVLKGIQTG---EDAIIAAKSGHVAGIVISNHGGRQLDTCRSG 366 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ ++ + + + GG R G DI K++ LGA GL Sbjct: 367 IEVLMEVTDALRK------------ENLEGKMEIYVDGGFRRGTDIFKALALGAKGIGLG 414 Query: 288 SPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 PFL V AI+ LR+E + M L+G R+ ++ + + Sbjct: 415 RPFLYAMSGYGQAGVERAIDLLREELEMVMRLMGVTRLDDIKRESLM 461 >gi|315636170|ref|ZP_07891424.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri JV22] gi|315479531|gb|EFU70210.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri JV22] Length = 358 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 124/347 (35%), Gaps = 65/347 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+K F L + L ++S +++ GK P+ I+ + + + Sbjct: 38 AGDELTYKSNEKSFQKIFLETKTLEDLSHSN--TNIQLFGKNYETPIFIAPVA---YQKL 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I+ +A A AM M + +F+ ++ L L +Q + + Sbjct: 93 VDIDGEIATAQAAN--AM----NSCMIVSSFSSSTFDDITKYTNSPLWFQL-YIQPDMNV 145 Query: 133 GVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNT---------------------NFAD 170 ++ + V LG + L + ++ P+ I NF + Sbjct: 146 NLELIKK-VEQLGYEALVITIDAPISGIRNVEQRMGFFLPDGISAINIKNPFQTTDNFEN 204 Query: 171 L---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + I L +P++LK + S + L GI ++ GG + Sbjct: 205 IFDIVEYLPTWKDIEYLKKNTKLPVILKGIT---SVSYAKKALDLGIDGIVVSNHGGRTL 261 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + +L I A+ + + GG+R G D+LK+I LGA Sbjct: 262 DTLPASIELLPKI-----------------AKVINKKIPILFDGGVRRGTDVLKAIALGA 304 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + P + A + V ++ L++E VSM G K +Q + Sbjct: 305 NAVLIGRPIIYGLATAGALGVAHTLKILKEELEVSMIFTGCKDIQSI 351 >gi|157736976|ref|YP_001489659.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri RM4018] gi|157698830|gb|ABV66990.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Arcobacter butzleri RM4018] Length = 358 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 124/347 (35%), Gaps = 65/347 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+K F L + L ++S +++ GK P+ I+ + + + Sbjct: 38 AGDELTYKSNEKSFQKIFLETKTLEDLSHAN--TNIQLFGKNYETPIFIAPVA---YQKL 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I+ +A A AM M + +F+ ++ L L +Q + + Sbjct: 93 VDIDGEIATAQAAN--AM----NSCMIVSSFSSSTFDDITKYTNSPLWFQL-YIQPDMNV 145 Query: 133 GVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNT---------------------NFAD 170 ++ + V LG + L + ++ P+ I NF + Sbjct: 146 NLELIKK-VEQLGYEALVITIDAPISGIRNVEQRMGFFLPDGISAINIKNPFQTTDNFEN 204 Query: 171 L---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + I L +P++LK + S + L GI ++ GG + Sbjct: 205 IFDIVEYLPTWKDIEYLKKNTKLPVILKGIT---SVSYAKKALDLGIDGIVVSNHGGRTL 261 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + +L I A+ + + GG+R G D+LK+I LGA Sbjct: 262 DTLPASIELLPKI-----------------AKVINKKIPILFDGGIRRGTDVLKAIALGA 304 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + P + A + V ++ L++E VSM G K +Q + Sbjct: 305 NAVLIGRPIIYGLATAGALGVAHTLKILKEELEVSMIFTGCKDIQSI 351 >gi|83767338|dbj|BAE57477.1| unnamed protein product [Aspergillus oryzae] Length = 573 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +N K F L R L I V + LGK++S P+ +S++ G K+ Sbjct: 221 AEGEISKRQNSKAFQKVSLRPRILRSI--PTVVTTTTILGKQVSLPVYMSAV--GIAKLA 276 Query: 73 ERI-NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R LA AA K +A + +N I+S + +P + L V + Sbjct: 277 HPDGERALAAAAGKEGLAQVL-----ANGANNVIESVMDARTSPEQPIFQQL-YVNRDIT 330 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP-------------LQEIIQPNGNTNFADL------- 171 +A GA +++ ++ LQ + + + + Sbjct: 331 KSEDVVRRA-ERAGASAIWITVDSPVVGKREMDERINLQVEARDDPSRKGQGVAKTMANF 389 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + L +P+++K + C D G++ ++ GG S + Sbjct: 390 ISPFIDWDILLWLRGLTKLPIVIKGIQC---VEDAVQAYHYGVQGIVLSNHGGRSQDTAQ 446 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILG 280 + L+L R Y + Q GG+R G D+LK+I LG Sbjct: 447 AP------------------LLTLLEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALG 488 Query: 281 ASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL P L A V A+E LR+E +M LG ++EL Sbjct: 489 ATAVGLGRPTLYSLAAGYGEQGVRRAVEILRQEIESNMVFLGVTNLKEL 537 >gi|317471560|ref|ZP_07930907.1| FMN-dependent dehydrogenase [Anaerostipes sp. 3_2_56FAA] gi|316900963|gb|EFV22930.1| FMN-dependent dehydrogenase [Anaerostipes sp. 3_2_56FAA] Length = 338 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 115/333 (34%), Gaps = 60/333 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG-----NNKMIE-R 74 RN + + + + L E + D S+E GK +P G + K + Sbjct: 47 RNYQKWQEIRVNMDTLCE-NLPA-DTSLELFGKTFRYPFFAGP-AGAVNLHYSEKYTDVT 103 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELRQYAPHTVLISNLGAVQLNYDF 132 N L + +A G ++ + +R+ LG + + Sbjct: 104 YNEVLVSSCADAGIAAFTGDG----TNPEVMCAATEAIRKT-------GGLGVPTVKP-W 151 Query: 133 GVQKAHQA---VHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +Q + VH GA + + ++ L+ + P G + ++A + ++ Sbjct: 152 NLQTIREKFAQVHSCGAFAVAMDVDAAGLPFLKNMTPPAGRKS----EQELAEIMKETNL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K V ++ ++G + ++ GG + Sbjct: 208 PFIVKGV---MTVRGALKAKEAGAKAIVVSNHGGRVLDQCP------------------S 246 Query: 245 TPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T L+ + + GG+R+G D+ K++ LGA + PF+ D V Sbjct: 247 TAEVLKEISDAVEGSMKILVDGGIRSGTDVFKALALGADGVLICRPFVTAVYGGGSDGVR 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 I+ + E +M + G ++ + +IR Sbjct: 307 TYIDKIGSELEDTMVMCGADSLK--KITREMIR 337 >gi|303248027|ref|ZP_07334293.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio fructosovorans JJ] gi|302490584|gb|EFL50489.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio fructosovorans JJ] Length = 343 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 111/314 (35%), Gaps = 34/314 (10%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + L R L E+ D +V G++LS P+L + MTG M +++ Sbjct: 44 SFKANLAALSAYRLNMRTLHEVKAA--DTTVTLFGRELSMPVLAAPMTGVLYNMGGKLSE 101 Query: 78 NLAIAAEKTKVAMAVGSQRV--MFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFG 133 A A A G+ +D S +R + ++ Sbjct: 102 E-AFIRMIIDGADAAGTLGACGDGADPAFFGSGLAAIRDRGGRGIPF-----IKPRGQDA 155 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 V++ GA + ++ ++ NG +++ L A +P ++K + Sbjct: 156 VKEMLGRAADAGAVAAGMDVDGAGLLVMALNGQPVSPKSPAELRELVEATKLPFIVKGI- 214 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 ++ + + +G ++ GG ++ I +D G+ Sbjct: 215 --MTPDEALVAFDAGAAGIVVSNHGGRVLDHTPGAAEVLPAIARAVKDRGV--------- 263 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKE 311 +A GG+R G D+LK + LGA + P + A + V + ++ E Sbjct: 264 --------ILADGGVRTGADVLKYLALGADAVLIGRPLVVGAFGGGAEGVSFLLNKIKTE 315 Query: 312 FIVSMFLLGTKRVQ 325 +M L GT V+ Sbjct: 316 LTSAMLLTGTASVR 329 >gi|149180363|ref|ZP_01858868.1| isopentenyl-diphosphate delta-isomerase II 2 [Bacillus sp. SG-1] gi|148852555|gb|EDL66700.1| isopentenyl-diphosphate delta-isomerase II 2 [Bacillus sp. SG-1] Length = 383 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 124/356 (34%), Gaps = 66/356 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + N++ F + L HR L ++ SV LG + P+L + + + I Sbjct: 49 EESTLRANREAFSQYELSHRIL--RDVSSIETSVTVLGHTIPSPVLFAPI---GVQAIAH 103 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIK------SFELRQYAPHTVLISNL--- 123 + LA AA + + + A + F+L V S + Sbjct: 104 PDGELATSRAAASMNLPFVTSTVSSYSMEEIAQQMKDTPRWFQLYYSGNEMVAESMIKRA 163 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFL---HLNPLQEII--------------- 160 A+ L D + ++ H+ + N + + Sbjct: 164 ESAGYSAIVLTVDTPIMGFRESDHINNYSPIGEGSGSGNYFSDPVFKSLLEKPILEDKQA 223 Query: 161 ----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 Q N A I + D+P+LLK V + D +L L+ + ++ Sbjct: 224 ALKKQLELFENPAVTWDAIHRIRQYTDLPILLKGV---VHPEDAKLALQYKVDGLIVSNH 280 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILK 275 GG G+ T LE + E + G+R G DI K Sbjct: 281 GGRQLDH------------------GVATLDVLEEICQVVQGEIPVLIDSGIRRGSDIFK 322 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +I LGA+ + PF+ A+D + V A+ + KEF +M L GT ++ E+ Sbjct: 323 AIALGATAVLIGRPFMYGLALDGEEGVKRAMHQILKEFETTMRLAGTVKISEIDKT 378 >gi|262277867|ref|ZP_06055660.1| L-lactate dehydrogenase (cytochrome) [alpha proteobacterium HIMB114] gi|262224970|gb|EEY75429.1| L-lactate dehydrogenase (cytochrome) [alpha proteobacterium HIMB114] Length = 382 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 68/368 (18%), Positives = 115/368 (31%), Gaps = 70/368 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN F+ L+ L VD S LG+K+ FPL +S T + Sbjct: 32 ADDESTLKRNTDSFNKCDLVPNVL--TDVSNVDTSTTVLGQKIDFPLFLSP-TAMHQMYH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL---- 123 + A AAEK ++ + + + S F+L L NL Sbjct: 89 HEGEQATARAAEKFGTFFSLSTMGTKSIEEVSNISGGPKMFQL-YIHKDQGLTDNLIERC 147 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGAD-----------GLFLHLNPLQEIIQ-PN-GN 165 A+ L D V + H G H + + P Sbjct: 148 QRSGFKAMCLTVDTIVAGNRERDHRTGFTTPPKLTLESLFSFATHPDWSLRYLMGPKFKL 207 Query: 166 TNFADLSSK--------IALLSSAMDVPLLLKEVGCG-------------LSSMDIELGL 204 N + L+ K + ++S D + K +S D + + Sbjct: 208 ANISHLTKKGSSIEISIMDYINSQFDTTMNWKHAEYAAKKWNGPFALKGVMSVEDAKRAI 267 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G I+ GG + D + ++ + I Sbjct: 268 DIGASAIMISNHGGRQLDGSRAPFDQLETL-----------------VDAVGDKIEIILD 310 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G +LK++ LGA + +L V ++ ++ E M L+GT+ Sbjct: 311 GGIRRGTHVLKALALGAKACSMGKAYLYALGAGGQPGVERVLQKMKDEITRGMTLMGTRN 370 Query: 324 VQELYLNT 331 V EL + Sbjct: 371 VNELTKDK 378 >gi|157106966|ref|XP_001649564.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] gi|108879700|gb|EAT43925.1| (s)-2-hydroxy-acid oxidase [Aedes aegypti] Length = 522 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 112/336 (33%), Gaps = 55/336 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++ + R L + ++ LG P+ I + + + LA AA Sbjct: 57 YEKIRIRPRCLARVG--NRSLAINALGCSFKMPIGIGPIALAKLAHCDG-EKALARAARS 113 Query: 86 TKVAMAVGS-QRVMFSD-----HNAIKSFEL-----RQYAPHTVLIS---NLGAVQLNYD 131 V + + V D K F+L R+ + + + A+ + D Sbjct: 114 MGVPFVLSALSSVSLEDVAEAIPRCPKWFQLFIFKDREMTENLIRRAERARYKAIVVTVD 173 Query: 132 FGVQKAHQAVHVLGADGLFL----------HLNP----LQEIIQPNGNTNFADLSSKIAL 177 V ++ + L H N + E + + + Sbjct: 174 TPVIGLRRS-EMKNPTSLPSKVTYANFCPPHNNVCSKNISEYV--RNQYDPTVGWDSLRW 230 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P++LK V L+ D + G++ ++ GG + ++ +I Sbjct: 231 LLSITSLPVILKGV---LTREDALMAADLGVQGIIVSNHGGRQLDSAPATIEVLPEI--- 284 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMD 296 + + GG+ G DI K+I LGA + + L A++ Sbjct: 285 --------------VEAVGDRVMVMHDGGITQGTDIFKAIALGAKMVFVGRAALWGLAVN 330 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + V ++ LR E +M + G K ++++ N Sbjct: 331 GQNGVEDVLDLLRVELDSAMAIAGCKTMKQITENRV 366 >gi|7431428|pir||T10242 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) - cucurbit gi|217909|dbj|BAA03131.1| glycolate oxidase [Cucurbita cv. Kurokawa Amakuri] Length = 367 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 68/352 (19%), Positives = 119/352 (33%), Gaps = 56/352 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG K+S P++I+ KM Sbjct: 29 AEDQWALKENRNAFSRILFRPRIL--IDVSKIDMSTTVLGFKISMPIMIAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVLI------ 120 A S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTTTTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 121 --SNLGAVQLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEIIQPNGNTNFADLSSKIA 176 + A+ L D + + + L FL L + + G + AD S + Sbjct: 145 EKAGFKAIALTVDTP-RLGRREADIKNRFTLPPFLTLKNFEGLDL--GKMDQADDSGLAS 201 Query: 177 LLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 ++ +D L ++V L++ D + ++SG ++ G Sbjct: 202 YVAGQIDRTLSWQDVKWLQTITKLPILVKGVLTAEDTRIAVQSGAAGIIVSNHGARQLDY 261 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T ++LE + E GG+R G D+ K++ LGAS Sbjct: 262 VPA------------------TIMALEEVVKAARGEVPVFLDGGVRRGTDVFKALALGAS 303 Query: 283 LGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + A + V ++ LR EF + M L G + +QE+ N + Sbjct: 304 GIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELIMALSGCRSLQEITRNHIV 355 >gi|320581996|gb|EFW96215.1| Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) [Pichia angusta DL-1] Length = 521 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 122/339 (35%), Gaps = 49/339 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN--NK 70 + + N+ R L +I + LG + + P ISS TG N Sbjct: 171 ADDEFTLRENRYALGRIFFRPRCLTDI--SNTSIETDILGVRTAAPFFISSFTGSNLIQP 228 Query: 71 MIERINRNLAIAAEKTKVAMAV---GSQRVMFSDHNAIKS----FELR-------QYAPH 116 E+I LA AA + K+A V GS + S ++ + AP Sbjct: 229 EGEKI---LARAAAEEKIAYMVPKRGSVSLEQLHAETAHSQTLFYQHEFESAEELREAPK 285 Query: 117 TVL-----ISNLGAVQLNYD---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + + A+ +N D G ++ V + A ++L L + Sbjct: 286 LFKHIETTMPQVKAIFVNVDIAAHGHREKEYKVREMEAGKADVNLGGL-----LGSEPEY 340 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + + + ++P++LK + DI + G R I+ GG + Sbjct: 341 VATWNDFETVRKSTNLPIILKGLQR---KEDILKAAELGFRGALISNTGGRQLDFSKPAI 397 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + +++ +L+ N+ Q GG G D++K++ LGA + G+ Sbjct: 398 ETLAEVH-----------EALKEKNIDRNQFQLFVEGGFSRGSDVIKALCLGA-IPGIGR 445 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L + V A + L++E + + LLG V L Sbjct: 446 PMLYSEVYGQKGVEKASQLLKEEILRDIKLLGASNVSCL 484 >gi|297790174|ref|XP_002862992.1| hypothetical protein ARALYDRAFT_333142 [Arabidopsis lyrata subsp. lyrata] gi|297839705|ref|XP_002887734.1| hypothetical protein ARALYDRAFT_895734 [Arabidopsis lyrata subsp. lyrata] gi|297308786|gb|EFH39251.1| hypothetical protein ARALYDRAFT_333142 [Arabidopsis lyrata subsp. lyrata] gi|297333575|gb|EFH63993.1| hypothetical protein ARALYDRAFT_895734 [Arabidopsis lyrata subsp. lyrata] Length = 369 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 115/362 (31%), Gaps = 76/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++++ KM Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E S ++ + + + A + QL Sbjct: 85 HP---------EGEYATARAASAAGTIMTLSSWATSSVEEVASTGP---GIRFFQLYVYK 132 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPLQEIIQPNGN-------------TNFADLS---- 172 Q V G + L ++ + + + NF L Sbjct: 133 DRNVVAQLVRRAERAGFKAIALTVDTP-RLGRRESDIKNRFTLPPYLTLKNFEGLDLGKM 191 Query: 173 ------SKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDI 213 + ++ +D L K+V L++ D + +++G + Sbjct: 192 DEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTAEDARMAVQAGAAGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T ++LE + + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TIIALEEVVKAAQGKIPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGAS + P + A + V ++ +R+EF ++M L G ++E+ N Sbjct: 294 VFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMMREEFELTMALSGCTSLKEITRNH 353 Query: 332 AL 333 + Sbjct: 354 II 355 >gi|86741159|ref|YP_481559.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] gi|86568021|gb|ABD11830.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] Length = 348 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 115/347 (33%), Gaps = 50/347 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N FDD L L + D + G + + PL ++ M + Sbjct: 29 AGEERTLTANMAAFDDVRLRPTVLRG--ASDPDIATRIFGDRWAAPLAVAPMA---FHTL 83 Query: 73 ERINRNLAIAAEKTKVAM-AVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLI 120 + LA T V M V S + + F R + Sbjct: 84 AHPDGELATVRAATSVGMPVVVSTMAGRRFEELVSAAGSPLWLQVYCFRDRFRTQRLIEH 143 Query: 121 S-NLGAVQLNYDFGVQKAHQAVHVLGADG------LFLHLN---PLQEIIQPNGNTNFAD 170 G L + + + + D + ++L+ + + Sbjct: 144 GERAGMNALVLTVDAPRLGRRLRDVRNDFRLPPGIMPVNLDGDGFSSPAAHASAELDPTL 203 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 S I L S +PLL+K + L++ D E +++G+ ++ GG + + ++ Sbjct: 204 DWSVIDWLRSISSLPLLVKGI---LTASDAERAVRAGVDGIVVSNHGGRQLDGVPATFEV 260 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +I + GG+R G D+L + +GA+ + P Sbjct: 261 LPEI-----------------VAAVAGSCPVLVDGGIRRGRDVLACLAVGAAAVLVGRPV 303 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L A+ + + L +E +M L GT + +++ LI H Sbjct: 304 LHGLAVGGQEGAAHVLGILIEELTDAMTLTGTPSLADIH--PGLIGH 348 >gi|301065771|ref|YP_003787794.1| l-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Lactobacillus casei str. Zhang] gi|300438178|gb|ADK17944.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus casei str. Zhang] Length = 368 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 114/334 (34%), Gaps = 50/334 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 RN F D ++ R L ++ D S F+G +L+ PLL + + G + + L Sbjct: 52 RNTTAFTDVQMLPRVLQG--VEKPDQSTTFMGARLASPLLTAPIAG---NTLAHPSGELG 106 Query: 80 -AIAAEKTKVAMA--VGSQRVMFSDHNAIKS-----------------FELRQYAPHTVL 119 A A++ + M+ + + + + L Q L Sbjct: 107 LAKGAKEAGIMMSQSTFASKTIAETAAVSDGPPYMFQLYMPKDWSYCQYLLDQAKQAGAL 166 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG---NTNFADLSSKIA 176 L A + + H+ G N Q+ + G + + I Sbjct: 167 AIILTADSTLGGYREKDVMNHYHLKGRLANLEGYNTGQQGVGAGGLFKESMQKLDLATID 226 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L+S +P+++K + D + +G ++ GG + I Sbjct: 227 KLASYSGLPIIVKGIQH---PDDAVAAITAGAAGIYVSNHGGRQLDGAPGAIEALPAIAA 283 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAM 295 + I GG++ G +LK++ LGA L G+ PF A+ Sbjct: 284 -----------------AVDHRVPIIFDGGVQRGTHVLKALALGADLVGIGRPFSYGLAL 326 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + V A + ++ E ++M L G + + ++ Sbjct: 327 GGWEGVKAVADHMKMEINIAMQLTGCQTMADVKQ 360 >gi|327294639|ref|XP_003232015.1| glycolate oxidase [Trichophyton rubrum CBS 118892] gi|326465960|gb|EGD91413.1| glycolate oxidase [Trichophyton rubrum CBS 118892] Length = 492 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 125/354 (35%), Gaps = 66/354 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R + + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVM--RNVREVNTKSSILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A + + Sbjct: 198 ELGIARACQSRGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAAQLHDCSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLILPMVPAK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D L +++GI ++ GG + Sbjct: 313 IDPGLTWEDVKWARQHTHLPLLLKGVQ---SADDAVLAMEAGIDGILLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ + + G+R G DILK+I LGA+ G Sbjct: 370 ASIIVLLELH--------------RRCPEVFDRMEIYIDSGIRRGTDILKAICLGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 + FL + + I+ +R E +M +G + + Y+NTA I H Sbjct: 416 MGRSFLFASNYGQEGAEHLIDIMRDELEGAMRNIGITSLDQAGPQYINTADIDH 469 >gi|302882540|ref|XP_003040179.1| hypothetical protein NECHADRAFT_44492 [Nectria haematococca mpVI 77-13-4] gi|256721049|gb|EEU34466.1| hypothetical protein NECHADRAFT_44492 [Nectria haematococca mpVI 77-13-4] Length = 380 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 111/343 (32%), Gaps = 82/343 (23%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA--IAAEK 85 + R L + ++ LG K S P I+ G + + LA AA Sbjct: 46 RIMIRPRIL--RNVTNINLERSILGFKCSAPFFIAPAAMG---RLAHPDGELALSQAAAN 100 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYA----PHTVLISNLGAVQLNYDFGVQKAHQAV 141 + + S S+ LR P L V ++ V+ + V Sbjct: 101 EGIIQCISSN----------ASYSLRSIVKAAPPSQPFFFQL-YVNSDHQKTVE-LLKTV 148 Query: 142 HVLGADGLFLHLNP------------LQE------IIQPNGNTNFADL------------ 171 LG +F+ ++ QE I + + Sbjct: 149 RELGVKAIFVTVDAPVPGKREADERAAQEGTVKSAISGSESSKDKKGSGFGRLMAQYIDK 208 Query: 172 ---SSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 +A + A VP++LK V ++ D++ ++ G+ ++ GG S ++ Sbjct: 209 SLSWEDLAWIREASGGVPIILKGVQ---TAEDVKKAVEYGMEGVLLSNHGGRSLDGSQA- 264 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 + L L R C E + GG G DILK+I LGA+ Sbjct: 265 -----------------SILVLLELRKNCPEVFDQLEVYIDGGFERGSDILKAIALGATA 307 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+ PFL + D L+ E SM L G +E Sbjct: 308 VGIGRPFLYSLLFGQDGAEHLSHILKDELETSMRLCGITSFEE 350 >gi|94309784|ref|YP_582994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cupriavidus metallidurans CH34] gi|93353636|gb|ABF07725.1| (S)-2-hydroxy-acid oxidase 1 [Cupriavidus metallidurans CH34] Length = 361 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 124/344 (36%), Gaps = 54/344 (15%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N F+ L+ RAL + + E G+ L +P+LI+ +K++ + Sbjct: 39 QRENGAAFERIRLMPRAL--VDMSQASARSELFGETLDYPILIAPTA--YHKLVHP-DGE 93 Query: 79 LAIA--AEKTKVAMAVGSQRVMFSDHNAIKS-----FEL----RQYAPHTVLISNLGAVQ 127 LA A T+ M V +Q + + A S F+L R+ ++ A Sbjct: 94 LATVQGASLTRTWMTVSTQASVTLEEVARASTAPLWFQLYMQPRREDSLALVRRAEQAGY 153 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-----------GNTNFADLSSK-- 174 + A + + F + + + G+ F + + Sbjct: 154 KALVVTIDAAVSGIRNVEQRAGFRLPDGVSAVNLAGFAANEPIRASVGSPIFRGMLAHAP 213 Query: 175 ----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L +P+L+K + L+ D+ L +G+ ++ GG + + D+ Sbjct: 214 TWSDIEWLCGQTTLPVLVKGL---LNPADVPAALNAGVSGIIVSNHGGRVLDTLPATIDV 270 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + GG+R G DI+K+I LGAS L P Sbjct: 271 LPAVAA-----------------AVAGAVPILLDGGVRRGTDIVKAIALGASAVLLGQPV 313 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L A+ VV + L+ E +M LLG ++++ +T + Sbjct: 314 LHALAVGGMPGVVHMLTLLQTELEAAMALLGRPTLRDIDASTLM 357 >gi|302753494|ref|XP_002960171.1| hypothetical protein SELMODRAFT_402239 [Selaginella moellendorffii] gi|300171110|gb|EFJ37710.1| hypothetical protein SELMODRAFT_402239 [Selaginella moellendorffii] Length = 375 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 105/351 (29%), Gaps = 47/351 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F + + L + D + LG K++ P++++ +K+ Sbjct: 30 AEDKWTLRENRSAFSRIRIRPQVL--VDVSHTDLTTSVLGLKIACPIMVAPTAL--HKLA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAP----------- 115 A + V S + + F+L + Sbjct: 86 HPEGELATARATAAANTVMVVSTSSSHTIEEIADTGPGIRFFQLYIFNKVRAMELVARAE 145 Query: 116 -----------HTVLISN-LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 T ++ ++ + + + +G P + Sbjct: 146 KAGYKAIVLTVDTPILGRREDDLRNRLVLPPDVSMKLIDGIGEQHSQ-PTEPGSSLAAVA 204 Query: 164 GNTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + +P LLK + L+ D + + ++ GG Sbjct: 205 SEYKDKSITWKDVQAFMKLTKLPFLLKGI---LTKEDALKAIDICVDGIIVSNHGGRQLD 261 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + + ++ I T S + GG+R G D+ K++ LGAS Sbjct: 262 HVPATISVLEEVAI--------TRNSCYVVAAAAGRCPVFVDGGIRRGTDVFKALALGAS 313 Query: 283 LGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P L A+D V ++ L+ E +M + G + + ++ Sbjct: 314 GVFVGRPVLFGLAIDGEQGVKKVLDMLKDELRTTMVIAGCPTLAHINRSSV 364 >gi|33416601|gb|AAH55638.1| Hao1 protein [Danio rerio] Length = 372 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 112/344 (32%), Gaps = 78/344 (22%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVM 98 VD S LG+++S P+ +S+ +M A A + M + S Sbjct: 59 DVSSVDLSTTVLGQRVSLPICVSATA--MQRMAHPDGETATARACLSSGTGMMLSSWSTS 116 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN---- 154 + E+ + AP V L + + +A G G+F+ ++ Sbjct: 117 SIE-------EVCEAAPGAVRWLQL-YIYKDRGLTQSLVRRA-EDAGYKGIFVTVDTPYL 167 Query: 155 ------------------------PLQEIIQPNGNTNFADL-------------SSKIAL 177 P + G + L I Sbjct: 168 GRRRDDVRNRFKLPSHLRMANFESPDLAFSKKEGYGEDSGLAVYVTQAIDATVRWQDIGW 227 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L + +P+++K V L++ D + L+ G+ ++ G + + D ++ Sbjct: 228 LKTLTKLPVVVKGV---LTAEDAKEALEYGVDGILVSNHGARQLDGVPATIDALPEV--- 281 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMD 296 + + GG+R G D+LK++ LGA + P L A Sbjct: 282 --------------VAAVAGQVEVFMDGGVRMGSDVLKALALGAKAVFIGRPVLWALACQ 327 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQE----LYLNTALIRH 336 V +E LR+E +++ L G + ++E L LI Sbjct: 328 GEKGVSDVLEILREELHLALALAGCRSLKEVNRSLLRRPELISR 371 >gi|227328034|ref|ZP_03832058.1| L-lactate dehydrogenase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 386 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 126/380 (33%), Gaps = 83/380 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ + G+KL+ P++++ + TG + Sbjct: 29 AYGEHTLRRNTADLADIALRQRILK--NVSDLSLETQLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFELRQYAPHTVLISNLGA 125 E A AA + + + + V + + F+L + + L Sbjct: 87 RGEV---QAARAAAQKGIPFTLSTVSVCPIEEVAPTIDRPLWFQLYVLKDRGFMRNVLER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNT 166 Q D A + G + + LQ ++ P NG Sbjct: 144 AQAAGIKTLVFTVDMPTPGARYRDAHSGMSGPNAAIRRV--LQAMVHPQWAWDVGLNGKP 201 Query: 167 -----------------NFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMD 199 N+ ++ +A + P+++K + L D Sbjct: 202 HDLGNVSAYRGTPTTLENYIGWLAENFDSSISWQDLAWIREMWKGPMIIKGI---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 + ++ G ++ GG + + T +L +A E Sbjct: 259 AKEAVRFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIADAVKGE 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 +A G+R G+D+++ I LGA L F+ A VV + + KE V+M Sbjct: 301 ITILADSGIRTGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTALIRHQ 337 L G K + ++ ++ + Q Sbjct: 361 LTGAKSIADITTDSLVQATQ 380 >gi|302908819|ref|XP_003049936.1| hypothetical protein NECHADRAFT_48632 [Nectria haematococca mpVI 77-13-4] gi|256730873|gb|EEU44223.1| hypothetical protein NECHADRAFT_48632 [Nectria haematococca mpVI 77-13-4] Length = 467 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 120/330 (36%), Gaps = 53/330 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER-INRNL 79 N + + L + +VD S FLG++LS P+L++ + + K+ + Sbjct: 139 ANTAYHQRVIFRPKVLRGVG--QVDISTSFLGQQLSCPILVAPTS--SIKLTHPDSEGAM 194 Query: 80 AIAAEKTKVAM---AVGSQRVMFSDHNAIKSFE-------LRQYAPHTVLI---SNLGAV 126 A A++ + V ++GS V + S+ R A L+ LGA Sbjct: 195 ARASQVSGVPPIIPSMGSYSVAEVIESLEPSYPFFMQLYIHRNRAETRRLLDDACRLGAK 254 Query: 127 QLNYDFGVQKAHQAVHVLGAD-----GLFLHLNPLQEIIQPNGNTNFADL-SSKIALLSS 180 + + + A Q+ P ADL I + Sbjct: 255 AIIVTVDLPVLSKRETSTSASLGGERARDKSTVAPQQAPTPANTIIDADLNWQDIKWIRD 314 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++P+L+K V S+ D + GL G ++ GG + Sbjct: 315 TTNLPVLIKGVQ---SAEDAKQGLAIGCAGIYLSNHGGRALDAAP--------------- 356 Query: 241 WGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 P L L + C E + + GG R G ++LK+I LGA++ L PFL Sbjct: 357 ---PATLVLLEIQKTCPEILKQMEVVVDGGFRRGSEVLKAICLGATVVCLGRPFLYALAY 413 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + L++E +M LLG +++ Sbjct: 414 GEEGAI----LLKEELKTAMQLLGVVNLKQ 439 >gi|13472415|ref|NP_103982.1| glycolate oxidase [Mesorhizobium loti MAFF303099] gi|14023161|dbj|BAB49768.1| glycolate oxidase [Mesorhizobium loti MAFF303099] Length = 381 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 125/379 (32%), Gaps = 74/379 (19%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN + F+ L+ L ++ E+D SV +G+KL+ P S T Sbjct: 26 DYIDGAADDEVTYRRNTESFETCDLVPNVLRGVN--EIDMSVTVMGQKLAMPFYCSP-TA 82 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSF-ELRQYAPHTVLISNLG 124 + R +A AA K V S V + +I S ++ Q+ H N Sbjct: 83 LQRLFHHQGERAVAKAAAKYGTMFGVSSLGTVSLEEARSISSSPQVYQFYFHRDRGLNRA 142 Query: 125 AVQLNYDFGVQKAHQAVHVLG--------------------ADGLFLHLNP--------- 155 +Q GV+ V + A L P Sbjct: 143 MMQRAKQVGVEVMMLTVDSITGGNRERDKRTGFAIPFKLNLAGMAQFALKPAWAINYFTH 202 Query: 156 -------LQEIIQPNG-----NTNFADLSS------KIALLSSAMDVPLLLKEVGCGLSS 197 L E + G + F ++ +A + P LK + +S Sbjct: 203 EGFKLPQLDEHVDMGGGTMSISRYFTEMLDPSMTWDDVAEMVRQWSGPFCLKGI---MSV 259 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + + G ++ GG + D ++I + Sbjct: 260 EDAKRAAEIGCSGIVLSNHGGRQLDGSRAAFDQLAEI-----------------VEAVGD 302 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 I GG++ G +LK++ LGA G+ +L P A V A+E +R E M Sbjct: 303 RIDVIMDGGVQRGTHVLKALSLGAKAVGIGRYYLFPLAAAGQPGVERALEQMRVEIERGM 362 Query: 317 FLLGTKRVQELYLNTALIR 335 L+G + +L R Sbjct: 363 KLMGCSSIGQLSRQNLRFR 381 >gi|167746747|ref|ZP_02418874.1| hypothetical protein ANACAC_01459 [Anaerostipes caccae DSM 14662] gi|167653707|gb|EDR97836.1| hypothetical protein ANACAC_01459 [Anaerostipes caccae DSM 14662] Length = 338 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 116/333 (34%), Gaps = 60/333 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG-----NNKMIE-R 74 RN + + + + L E + D S+E GK +P G + K + Sbjct: 47 RNYQKWQEIRVNMDTLCE-NLPA-DTSLELFGKTFRYPFFAGP-AGAVNLHYSEKYTDVT 103 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELRQYAPHTVLISNLGAVQLNYDF 132 N L + +A G ++ + +R+ LG + + Sbjct: 104 YNEVLVSSCADAGIAAFTGDG----TNPEVMCAATEAIRKT-------GGLGVPTVKP-W 151 Query: 133 GVQKAHQA---VHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDV 184 +Q + VH GA + + ++ L+ + P G + ++A + ++ Sbjct: 152 NLQTIREKFAQVHSCGAFAVAMDVDAAGLPFLKNMTPPAGRKS----EQELAEIMKETNL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K V ++ ++G + ++ GG + Sbjct: 208 PFIVKGV---MTVRGALKAKEAGAKAIVVSNHGGRVLDQCP------------------S 246 Query: 245 TPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVV 302 T L+ + + + GG+R+G D+ K++ LGA + PF+ + V Sbjct: 247 TAEVLKEISDAVDGSMKILVDGGIRSGADVFKALALGADGVLICRPFVTAVYGGGSEGVR 306 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 I+ + E +M + G ++ + +IR Sbjct: 307 TYIDKIGSELEDTMVMCGADSLK--KITREMIR 337 >gi|118370968|ref|XP_001018684.1| FMN-dependent dehydrogenase family protein [Tetrahymena thermophila] gi|89300451|gb|EAR98439.1| FMN-dependent dehydrogenase family protein [Tetrahymena thermophila SB210] Length = 371 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 50/324 (15%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------ 94 ++D S LG+KL+ P+ I+ T + R AA+K + S Sbjct: 58 LKDIDLSTTVLGQKLNIPIGIAP-TAMHRMATPRGELTTVTAAKKVGTIYTLSSLATTNM 116 Query: 95 QRVMFSDHNAIKSFEL-----RQYAP-HTVLISNLGAVQLNYD-----FGVQKAHQAVHV 143 + V +A++ F+L R+ LG + G+++ + Sbjct: 117 EDVAKEQPDALRWFQLYIAKDRKITEVMVREAERLGYRAIAVTVDAPYLGIREGDERNKF 176 Query: 144 LGADGLFLHL--NPLQEII-----------QPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 L L + + +E + A I L S +P++LK Sbjct: 177 TLPSHLKLEILESFKKEFAVKGKGGSGLFEMFKDQIDPAMSWEDIKWLKSFTKLPVILKG 236 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + G D + G+ + GG + S D+ ++ +D Sbjct: 237 IQNG---EDALRAAQLGVH-IWVTNHGGRQLDTVRSTIDMLPEVMHAIKD---------- 282 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLR 309 Y N + GG+R G D+LK + LGA + P L A + V+ + Sbjct: 283 ----YRNTVEVYVDGGIRRGTDVLKCLALGAKCVFIGRPLLFSLAAEGEQGVLKMFQLFE 338 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 KE V+M LLG ++ +L L + Sbjct: 339 KEMKVAMMLLGAGKISDLGLKHLV 362 >gi|317158625|ref|XP_001827130.2| (S)-2-hydroxy-acid oxidase [Aspergillus oryzae RIB40] Length = 385 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 110/326 (33%), Gaps = 37/326 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNK 70 + N + + + R L + ++ LG S P IS G Sbjct: 72 AAGEWSYRNNLEAYGRFRFKPRML--VDVTNIESTLPTTILGHNFSAPFYISPCARGGLA 129 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E +N AA + + + + S S + + + + + Sbjct: 130 HPEA-EKNFVKAAYEEDI-LYIPSLYASLSVEEIAAA---KPSNGSQTIFQQVYLTE--N 182 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA---------LLSSA 181 D ++ + V LG+ + ++ + + + L + Sbjct: 183 DTETKQLFEKVEKLGSKAIVFTVDSAADGNRHRAARYGVGSADSSYTYITWDYYKKLQNM 242 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P++LK + S D++L + G ++ GG S ++ +I Sbjct: 243 TSLPVVLKGIQ---SVEDVKLAVAHGAPAVILSNHGGRQLDGTPSPLEIALEIH------ 293 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 E A + + A GG+R G D+LK + LG + GL PF+ + V Sbjct: 294 --------EEAPELFEQIEIYADGGIRYGADVLKLLALGVTAVGLGRPFMFANTYGVEGV 345 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E + LG +++L Sbjct: 346 KHAIQLLKHEIAIDAGNLGVGDLKKL 371 >gi|213512490|ref|NP_001134549.1| Hydroxyacid oxidase 2 [Salmo salar] gi|209734194|gb|ACI67966.1| Hydroxyacid oxidase 2 [Salmo salar] Length = 358 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 107/328 (32%), Gaps = 67/328 (20%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISS------------MTGGNNKMIERINR----NLAIAA 83 D G ++SFP+ I+ M + E +N + Sbjct: 54 DVSLSDTRTTVQGTEISFPVGIAPAAFHCLAWHEGEMA--TARATEAVNTCYITSTYSTC 111 Query: 84 EKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV-QKA 137 ++A A + Q ++ D +S R A LG L V Sbjct: 112 SVEEIAAAAPNGYRWFQLYVYRDRKLSESIIHRVEA--------LGYKALVLTVDVPYTG 163 Query: 138 HQAVHVLGADGLFLHLNP------LQEIIQPNGNT--------NFADLSSKIALLSSAMD 183 + + L HL QE P G + + + L S Sbjct: 164 KRRNDIRNQFKLPPHLKVKNFDGVFQEATGPAGEEYGVPANTLDPSISWKDVYWLQSLTR 223 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++K + L+ D EL ++ G++ ++ GG + D S+I Sbjct: 224 LPIIIKGI---LTKEDAELAVEHGVQGIIVSNHGGRQLDGGPATIDALSEI--------- 271 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVV 302 + GG+R G D+LK++ LGA + P A + + Sbjct: 272 --------VDTVQGRIEVYLDGGVRTGSDVLKAVALGAKCVFIGRPAVWGLAYKGEEGLK 323 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLN 330 + L EF +SM L G + V E+ N Sbjct: 324 EVLHILNDEFRLSMALSGCRNVAEINRN 351 >gi|323650489|gb|ADX97325.1| glycolate oxidase [Mangifera indica] Length = 370 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 116/364 (31%), Gaps = 80/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 30 AEDQWTLRENRFAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E S ++ + + + A + QL Sbjct: 86 HP---------EGEYATARAASAAGTIMTLSSWATSSVEEVASTGP---GIRFFQLYVYK 133 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPL----QEIIQPNG--------NTNFADL------ 171 Q V G + L ++ +E N NF L Sbjct: 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLRNFEGLDLGKMD 193 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + L + +P+L+K V L++ D L +++G Sbjct: 194 QANDSGLASYVAGQIDRSLSWKDVKWLQTITKLPILVKGV---LTAEDARLAIQAGAAGI 250 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNG 270 ++ G + + T ++LE + GG+R G Sbjct: 251 IVSNHGARQLDYVPA------------------TIMALEEVVKASQGRVPVFLDGGVRRG 292 Query: 271 VDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+ K++ LGAS + P + A D + A++ LR EF ++M L G + ++E+ Sbjct: 293 TDVFKALALGASGIFIGRPVVFSLAADGEAGIRKALQMLRDEFELTMALSGCRSLKEITR 352 Query: 330 NTAL 333 + + Sbjct: 353 DHIV 356 >gi|46121219|ref|XP_385164.1| hypothetical protein FG04988.1 [Gibberella zeae PH-1] Length = 412 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 110/365 (30%), Gaps = 79/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ L R L + +V+ + LG + P + + Sbjct: 58 ATDLVTVTNNRELIRRVMLRPRIL--RNVSQVNIGRKILGLQSKAPFFMCPAA---MATL 112 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + L AA + + S + AP V N Sbjct: 113 AHPDGELGWSRAAASEGIFEIISSNASYSLP-------SIIGAAPPGHPFFLQLYVNSNR 165 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL------------------QEIIQPNGNTNFADL- 171 VQ ++A H LG +F+ ++ E+ + + Sbjct: 166 PKTVQLLNRA-HSLGIKAIFVTVDAPVPGKREADERAPQAVVIKSEMSGSESSKDGKGSG 224 Query: 172 --------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + VP++LK V + D++L + G+ ++ G Sbjct: 225 LGRLMGQYIDKSLSWDDLEWIRRESSVPIVLKGVQ---TVEDVKLAVDYGVDGVMLSNHG 281 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLS---LEMARPYCNE----AQFIASGGLRNG 270 G S GI S L R E + GG G Sbjct: 282 GRSLD-------------------GISAQASILILLEVRKRFPEAFDHLEIFIDGGFERG 322 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK+I LGA+ G+A PFL + V + L+ E SM L G + + Sbjct: 323 SDILKAIALGATAVGIARPFLYSLVYGQKGVEHLSQILKDELETSMRLAGLTSLDQ--AT 380 Query: 331 TALIR 335 +L+ Sbjct: 381 PSLVN 385 >gi|281345318|gb|EFB20902.1| hypothetical protein PANDA_016525 [Ailuropoda melanoleuca] Length = 348 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 112/352 (31%), Gaps = 78/352 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + EVD S LG+++S P+ + + + Sbjct: 31 ANDEETLADNSAAFSRWKLYPRML--RNVAEVDLSTSVLGQRVSMPICAGATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 ++ LA A M + S + E+ + +P + L + + Sbjct: 86 AHVDGELATVRACRSLGTGMMLSSWSTSSIE-------EVAEASPEALRWLQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN------------------PLQEIIQPNGNT------ 166 D Q +A G +FL ++ P + N Sbjct: 138 DVTKQLVQRA-ERKGYKAIFLTVDTPYLGNRFDDVRNSFKLPPHLRMKNFETNDLAFSPK 196 Query: 167 -NFAD----------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 NF D I L +P++ K + G D +K G+ Sbjct: 197 ENFGDKSGLASYVTKSIDPSISWEDIKWLRGLTSLPIVAKGILRG---DDAREAVKHGLN 253 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + + D +I + + GG+R Sbjct: 254 GILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEVFLDGGVRK 296 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 G D+LK++ LGA + P A V +E L++EF ++M L G Sbjct: 297 GTDVLKALALGAKAVFVGRPIIWGLASQGEKGVQDVLEILKEEFRLAMALSG 348 >gi|253690492|ref|YP_003019682.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757070|gb|ACT15146.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 386 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 126/380 (33%), Gaps = 83/380 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ + G+KL+ P++++ + TG + Sbjct: 29 AYGEHTLRRNTADLADIALRQRILK--NVSDLSLETQLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFELRQYAPHTVLISNLGA 125 E A AA + + + + V + F+L + + L Sbjct: 87 RGEV---QAARAAAQKGIPFTLSTVSVCPIEEVAPTIERPLWFQLYVLKDRGFMRNVLER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNT 166 Q D A + G + + LQ ++ P NG Sbjct: 144 AQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAIRRV--LQAMVHPQWAWDVGLNGKP 201 Query: 167 -----------------NFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMD 199 N+ ++ +A + P+++K + L D Sbjct: 202 HDLGNVSAYRGTPTTLENYIGWLAENFDSSISWQDLAWIREMWKGPMIIKGI---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 + ++ G ++ GG + + T +L +A + Sbjct: 259 AKEAVRFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIADAVKGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 +A G+R G+D+++ I LGA L F+ A VV + + KE V+M Sbjct: 301 ITILADSGIRTGLDVVRMIALGADSVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTALIRHQ 337 L GTK + ++ ++ + Q Sbjct: 361 LTGTKSIADITTDSLVQATQ 380 >gi|168031904|ref|XP_001768460.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680385|gb|EDQ66822.1| predicted protein [Physcomitrella patens subsp. patens] Length = 372 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 121/354 (34%), Gaps = 57/354 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N++ F L R L + +D + +G K+S P++++ ++K+ Sbjct: 33 DQVSLRENREAFSRIRLRPRIL--VDVSNIDVATSVMGFKISMPIMVAPTA--HHKLAHP 88 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVLISNL----- 123 A + + S S + F+L Y + I+ + Sbjct: 89 EGELATARAASAADTLMILSSSANCSMEEVAATGPGVRFFQLYVYKDRNITITLVRRAEQ 148 Query: 124 ---GAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------------NPLQEIIQPNG 164 A+ L D + + + L HL + E+ Sbjct: 149 FGFKAIVLTVDTP-RLGRREADIKNRFKLPSHLVYKNLEGLMNLEQMDKSSHSELASWAD 207 Query: 165 NTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L + L S +P+L+K + L++ D L L++G++ ++ G Sbjct: 208 SHFDRSLNWKDVEWLQSITHLPVLVKGI---LTAEDASLALQAGVKGIIVSNHGARQLDH 264 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + + ++ GG+R G D+ K++ LGAS Sbjct: 265 VPATISVLEEV-----------------VYAVRGRVPVFLDGGIRRGSDVFKALALGASG 307 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + P A+D ++ LR EF ++M L+G + V+E+ L Sbjct: 308 VFVGRPVPYALAVDGEAGATKVLQMLRDEFELTMALIGVRSVKEIRRQHVLTEQ 361 >gi|215765674|dbj|BAG87371.1| unnamed protein product [Oryza sativa Japonica Group] Length = 365 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 69/373 (18%), Positives = 126/373 (33%), Gaps = 100/373 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N++ F R L I ++ + LG +S P++I+ Sbjct: 30 AEDQWTLKENREAFSRILFRPRIL--IDVSRINMATNVLGFNISMPIMIAPSAMQKMAHP 87 Query: 64 ----------------MTGG--NNKMIERIN--------------------RNLAIAAEK 85 MT + +E +N R L AE Sbjct: 88 EGELATARAASAAGTIMTLSSWSTSSVEEVNSAAPGIRFFQLYVYKDRNIVRQLVRRAEL 147 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P +++ N A+ L + Sbjct: 148 AGFKAIALTVDTPRLGRREADIKNRFNL----PPHLVLKNFEALDLGK----------MD 193 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL ++ Q + + ++ D+ L + +P+L+K V +++ D L Sbjct: 194 KTNDSGLASYV-----ASQVDRSLSWTDV----KWLQTITSLPILVKGV---MTAEDTRL 241 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 ++SG ++ G + + T LE R Sbjct: 242 AVESGAAGIIVSNHGARQLDYVPA------------------TISCLEEVVREAKGRLPV 283 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS G+ P L A+D V ++ LR E ++M L G Sbjct: 284 FLDGGVRRGTDVFKALALGAS--GIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSG 341 Query: 321 TKRVQELYLNTAL 333 + E+ N + Sbjct: 342 CTSLAEITRNHVI 354 >gi|115388051|ref|XP_001211531.1| predicted protein [Aspergillus terreus NIH2624] gi|114195615|gb|EAU37315.1| predicted protein [Aspergillus terreus NIH2624] Length = 361 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 107/360 (29%), Gaps = 86/360 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + NK + R L I +D + LG + S P I GG K+ Sbjct: 22 AEDEFTVRWNKDSWRTIRFRPRVLRPIR--SIDLTTSILGTEYSVPFFICPAGGG--KLA 77 Query: 73 ERINRNLAIAAEK--------TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 L A +A Q +++ Sbjct: 78 HPTGEVLLTQAAGKHGVLHWVCNMAGCSQKQIADARGPAQTLYWQIYAMN---------- 127 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL----------------------QE---- 158 + ++ QA+ LG G L ++ + Q+ Sbjct: 128 ----DLSVTEKEIKQAI-ALGYRGFALTVDAIWSGKRERDLRLSVDGGDDSDVDQDEEAN 182 Query: 159 ---IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P + S IA L ++P+ +K + S D L ++ G+ Sbjct: 183 DGFASGPTVKRSPIWTEFDWPSSIAWLRKITNLPIAIKGIQ---SWEDAVLCMEYGVHP- 238 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGL 267 ++ GG +L R +C + + I GG+ Sbjct: 239 WLSNHGGRQLEGAP------------------SAVDTLLAIRKHCPQVFDRCEVIVDGGI 280 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI+K++ LGA GL FL V AI LR E +M LLG + +L Sbjct: 281 TRGADIVKALALGARAVGLGRGFLYALAFGERGVSRAIRILRHEVETTMALLGVTNLGQL 340 >gi|193208036|ref|NP_001122941.1| hypothetical protein F41E6.5 [Caenorhabditis elegans] gi|169404808|gb|ACA53536.1| Hypothetical protein F41E6.5b [Caenorhabditis elegans] Length = 371 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 129/363 (35%), Gaps = 66/363 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 ++ + RN F++ + R L S + +D S+++L GKK FP+ I+ + Sbjct: 32 AEQEESLRRNISAFNNLLIRPRCL--RSVENIDTSIDWLNGKKSVFPVGIAPTA---FQK 86 Query: 72 IERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 + ++ L+ AA + + D F+L Y + Sbjct: 87 MATLDGELSTVRGAAASNSIMICSSWSTTSVEDIGKEAKIVGATIWFQLYVYKDRAITES 146 Query: 119 -----LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-----EIIQPNGNTNF 168 + + A+ L D V + L HL + P G+ Sbjct: 147 LIHRAEAAGVEALVLTVDTPV-LGRRLKDTYNKFSLPKHLKFANFESNTQAEMPKGHVGE 205 Query: 169 ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + + + ++P+++K V G D L L++G+ ++ Sbjct: 206 SGFMQYVSSQIDPSLDWNTLKWIRTKTNLPVIVKGVMRG---DDALLALEAGVDGIIVSN 262 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDIL 274 GG + T SL R N GG+RNG DIL Sbjct: 263 HGGRQMDCTVA------------------TIESLPEVLRAVDNRIPVWMDGGVRNGRDIL 304 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGA + P L A S V A + L+ EF ++ L G + ++EL + Sbjct: 305 KAVALGARGVFVGRPVLWGLATSGSAGVSAVLGLLQSEFYHALQLSGFRSIKELQNDKHA 364 Query: 334 IRH 336 I H Sbjct: 365 IVH 367 >gi|239906762|ref|YP_002953503.1| FMN-dependent dehydrogenase domain protein [Desulfovibrio magneticus RS-1] gi|239796628|dbj|BAH75617.1| FMN-dependent dehydrogenase domain protein [Desulfovibrio magneticus RS-1] Length = 390 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 110/327 (33%), Gaps = 38/327 (11%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------GNNKM 71 N + L R L + D +VE GK LS P+L + MTG G Sbjct: 94 AFTANLEALSKVRLNMRTLHNVKTA--DTTVELFGKTLSMPILAAPMTGVLYNMGGRLAE 151 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 E I R + AAE + D + A H + A Sbjct: 152 DEFIRRVIDGAAEAGTIGACGDGADPAMFDSGLA---AIAAKAGHGIPFIKPRAQDAIMA 208 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + A V +G D L ++ G ++ L A P ++K V Sbjct: 209 LLKRSAEAGVAAVGVDVDGAGL----AVMALKGQPVSPKTPEELRELVGATTTPFIVKGV 264 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ + E+ +G ++ GG ++ I Sbjct: 265 ---MTPDEAEIAFAAGAAAIVVSNHGGRVLDHTPGAAEVLPAI----------------- 304 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 AR + +A GG+R G D+LK + LGA + P + A + V + +R Sbjct: 305 ARAVKGKGVILADGGVRTGADVLKYLALGADAVLVGRPLVIGAFGGGAEGVALLLGKMRA 364 Query: 311 EFIVSMFLLGTKRVQELYLNTALIRHQ 337 E +M L GT V+E ++ ++ Q Sbjct: 365 ELAAAMLLTGTASVRE--VSPRIVSFQ 389 >gi|238506337|ref|XP_002384370.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] gi|220689083|gb|EED45434.1| (S)-2-hydroxy-acid oxidase, putative [Aspergillus flavus NRRL3357] Length = 385 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 109/326 (33%), Gaps = 37/326 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNK 70 + N + + + R L + ++ LG S P IS G Sbjct: 72 AAGEWSYRNNLEAYGRFRFKPRML--VDVTNIESTLPTTILGHNFSAPFYISPCARGGLA 129 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E +N AA + + + + S S + + + + + Sbjct: 130 HPEA-EKNFVKAAYEEDI-LYIPSLYASLSVDEIAAA---KPSNGSQTIFQQVYLTE--N 182 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA---------LLSSA 181 D ++ + V LG+ + ++ + + + L + Sbjct: 183 DTETKQLFEKVEKLGSKAIVFTVDSAADGNRHRAARYGVGSADSSYTYITWDYYKKLQNM 242 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P++LK + S D++L + G ++ GG S ++ +I Sbjct: 243 TSLPVVLKGIQ---SVEDVKLAVAHGAPAVILSNHGGRQLDGTPSPLEIALEIH------ 293 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 E A + + A GG+R G D+LK + LG GL PF+ + V Sbjct: 294 --------EEAPELFEQIEIYADGGVRYGADVLKLLALGVRAVGLGRPFMFANTYGVEGV 345 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E + LG +++L Sbjct: 346 KHAIQLLKHEIAIDAGNLGVGDLKKL 371 >gi|115768303|ref|XP_790170.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115971320|ref|XP_001188645.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 400 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 116/353 (32%), Gaps = 57/353 (16%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---------- 65 + + N++ F L L D S LG+K+ FP+ I+ Sbjct: 68 EQSVRDNQEAFKRIRLQSCIL--RDVSSRDISTTILGQKVPFPIGIAPTAMQMMAHPEGE 125 Query: 66 ----------GGNNKMIERINRNLAIAAEKTKVAMAVG--------SQRVMFSDHNAIKS 107 G + + AE + + S + Sbjct: 126 MAMAKAATAMGTGMVLSAWTTSTIEEVAEASGNGLRWFHVHIFRDRSITRKIIERAERAG 185 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--EIIQPNGN 165 + + T ++ L +F + + + N E + + Sbjct: 186 YRAIFISGDTPVLGR-RLRALRNEFALPSKFRLQSFPLQLQIEDGTNNDNFPEYVNTQID 244 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + I + S +P+++K + L++ D + G+ ++ GG + Sbjct: 245 DTVSW--DDIGWIRSISSLPIVIKGI---LTAADAREAVSRGVAGVVVSNHGGRQLDGVP 299 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D+ ++ + GI + GG+R+G DILK++ LGA Sbjct: 300 ASIDVLDEVASAIRGSGI----------------EVFFDGGVRSGTDILKALALGARAVF 343 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P L D S V +E L EF V+M L G+ V ++ + L+R Q Sbjct: 344 IGRPALWALNYDGSAGVCKMLEILMIEFSVAMALTGSLSVADIKKD--LLRRQ 394 >gi|300722611|ref|YP_003711901.1| L-lactate dehydrogenase, FMN-linked [Xenorhabdus nematophila ATCC 19061] gi|297629118|emb|CBJ89706.1| L-lactate dehydrogenase, FMN-linked [Xenorhabdus nematophila ATCC 19061] Length = 380 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 122/378 (32%), Gaps = 80/378 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L E+ G+K+S P+ ++ + G + + Sbjct: 29 AYAEHTLQRNTADLSDIELRQRVLK--DMSELSLETSLFGEKMSMPVALAPV-GLSGMYV 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA K +A + + V + A F+L + + L Q Sbjct: 86 RRGEVQAARAAAKKGIAFTLSTVSVCPIEEVAAAIDRPIWFQLYVLKDRGFMRNVLERAQ 145 Query: 128 --------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 D V A + G + + Q I P Sbjct: 146 AAGVKNLVFTVDMPVPGARYRDAHSGMSGPNASMKRI--FQAITHPRWAWDVGLWGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 G N+ + + + P++LK + L D + Sbjct: 204 LGNISAYRGKPIGLGNYMEWLGNNFDPSIAWKDLEWIRDLWKGPMILKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A ++ Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVKSDIT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R G+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILTDSGIRTGLDVVRMLALGADSVLLGRAFVYALAAAGEAGVSNLLDLIDKEIRVAMTLT 362 Query: 320 GTKRVQELYLNTALIRHQ 337 G + + E+ + L++HQ Sbjct: 363 GARSISEI-NSELLVQHQ 379 >gi|302337986|ref|YP_003803192.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirochaeta smaragdinae DSM 11293] gi|301635171|gb|ADK80598.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Spirochaeta smaragdinae DSM 11293] Length = 338 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 112/316 (35%), Gaps = 30/316 (9%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K + L R + + + + FL L+FP + + + G M ++ N Sbjct: 48 ANVKALEAVRLNMRTIHG--VRDPNTACTFLSHSLAFPAMAAPLGGVAFNMSKKSNEASY 105 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 I A T A + I R A G + G + +A Sbjct: 106 INAVVTGCRDAGTIAGTGDGEEEIIHHEACRAIAGAGGY----GIPFIKPWEGKEIVKKA 161 Query: 141 VHVLGADGLFLHLN-PLQEII--QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 A + ++ +I + G F ++A L +D+P++LK + +++ Sbjct: 162 EEARKAGARQIGIDIDASGLITLKLMGKPVFPRKREELASLIKEIDMPVILKGI---MTA 218 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + + + +G ++ GG ++ I V Sbjct: 219 DEAKAAVDAGACAIVVSNHGGRVLDATPGTAEVLPKIAEV-----------------VKG 261 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSM 316 + GG+R+G+D+ K + LGA + P A+ AV +E+L++E +M Sbjct: 262 RIPLLVDGGIRSGIDLFKMLALGADFALIGRPVAVAALGGGRAAVRTLMETLQQELYRTM 321 Query: 317 FLLGTKRVQELYLNTA 332 + G + E+ ++ Sbjct: 322 VMTGCASLSEIDRSSL 337 >gi|226225654|ref|YP_002759760.1| glycolate oxidase [Gemmatimonas aurantiaca T-27] gi|226088845|dbj|BAH37290.1| glycolate oxidase [Gemmatimonas aurantiaca T-27] Length = 358 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 129/360 (35%), Gaps = 78/360 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ ++ L R L + E+D SV LG+ LS P+L++ +K+I Sbjct: 31 AGDECTLGWNERDWNSIRLRQRVL--VDVAELDTSVSLLGRTLSHPILLAPTA--YHKLI 86 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + +A A A + M + S + A + L VQ + Sbjct: 87 HA-DGEVATARGASEAGAPMIMSSFSNSPIEDVARAT--------TAPFWFQL-YVQPDR 136 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP------------------------LQEIIQ----- 161 +F + V G + L L ++ L+ + Q Sbjct: 137 EFTKALVQR-VEAAGCEALCLTVDTPVLGARYRETRTGFHLPDGLTRANLEGMTQVAADA 195 Query: 162 ----PNGNTNFADLSSKI-----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P G A L ++ L S VP+LLK + + D L ++ G Sbjct: 196 AHRPPEGAIYSAVLEPRLTWKDVEWLRSIATVPVLLKGI---MDPDDARLAVQHGASGVI 252 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGV 271 ++ G + + T ++L + + GG+R G Sbjct: 253 VSNHGARNLDTVP------------------STAMALPHVVDAIDGRVPVLVDGGIRRGT 294 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+LK++ LGAS + P+L A+D + V + +LR E ++M L G V + + Sbjct: 295 DVLKALALGASSVLIGRPYLYGLAVDGAAGVSRVVRTLRTELEMAMALTGRTSVSAIDRS 354 >gi|260769892|ref|ZP_05878825.1| L-lactate dehydrogenase [Vibrio furnissii CIP 102972] gi|260615230|gb|EEX40416.1| L-lactate dehydrogenase [Vibrio furnissii CIP 102972] gi|315182115|gb|ADT89028.1| L-lactate dehydrogenase [Vibrio furnissii NCTC 11218] Length = 378 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 123/374 (32%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++D S E G+ L+ P+ ++ + TG + Sbjct: 31 SEHTLRRNTDDLSDIALRQRVL--NDMSQLDLSTELFGESLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN 122 E A AA + + + V + A F+L R + + + + Sbjct: 89 EV---QAATAASNKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + +Q + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAARRV--MQAMTHPSWAWDVGLLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L + D + Sbjct: 204 LGNISTYRGTPTKLEDYIGWLGTNFDPSISWKDLEWIRDFWDGPMVIKGI---LDTEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L ++A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPDIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 ILVDSGIRTGLDVVRMLALGADCTLLGRAFVYALAAQGQAGVENLLDLFEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K +Q+L + + Sbjct: 363 GAKTIQDLSRESLV 376 >gi|83775878|dbj|BAE65997.1| unnamed protein product [Aspergillus oryzae] Length = 375 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 110/326 (33%), Gaps = 37/326 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNK 70 + N + + + R L + ++ LG S P IS G Sbjct: 69 AAGEWSYRNNLEAYGRFRFKPRML--VDVTNIESTLPTTILGHNFSAPFYISPCARGGLA 126 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E +N AA + + + + S S + + + + + Sbjct: 127 HPEA-EKNFVKAAYEEDI-LYIPSLYASLSVEEIAAA---KPSNGSQTIFQQVYLTE--N 179 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA---------LLSSA 181 D ++ + V LG+ + ++ + + + L + Sbjct: 180 DTETKQLFEKVEKLGSKAIVFTVDSAADGNRHRAARYGVGSADSSYTYITWDYYKKLQNM 239 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P++LK + S D++L + G ++ GG S ++ +I Sbjct: 240 TSLPVVLKGIQ---SVEDVKLAVAHGAPAVILSNHGGRQLDGTPSPLEIALEIH------ 290 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 E A + + A GG+R G D+LK + LG + GL PF+ + V Sbjct: 291 --------EEAPELFEQIEIYADGGIRYGADVLKLLALGVTAVGLGRPFMFANTYGVEGV 342 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 AI+ L+ E + LG +++L Sbjct: 343 KHAIQLLKHEIAIDAGNLGVGDLKKL 368 >gi|167759413|ref|ZP_02431540.1| hypothetical protein CLOSCI_01760 [Clostridium scindens ATCC 35704] gi|167662970|gb|EDS07100.1| hypothetical protein CLOSCI_01760 [Clostridium scindens ATCC 35704] Length = 337 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 109/309 (35%), Gaps = 48/309 (15%) Query: 39 ISFDEV------DPSVEFLGKKLSFPLL---ISSMTGGNNKMIERI--NRNLAIAAEKTK 87 I+ D + D + E G+ +P+ I +M + + N L + Sbjct: 57 INMDTICENKPLDLTSEIFGRTFKYPIFAAPIGAMKLHYGDKYDDLEYNDILVSSCADAG 116 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 +A G ++ ++ I + +N +++ + G+ Sbjct: 117 IAAFTGDG----TNPAVMEGAARAIKQKDGNGIPTVKPWDIN---TLKEKLAMIKDAGSF 169 Query: 148 GLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + + ++ L+ + P G+ ++ + +VP ++K + ++ Sbjct: 170 AVAMDIDAAGLPFLKNLTPPAGSKT----VEELREIVKEAEVPFIIKGI---MTVKGALK 222 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G ++ GG + + ++ ++I N+ + + Sbjct: 223 AKEAGAAAIVVSNHGGRVLDQCPATAEVLAEIAD-----------------AVGNDMKIL 265 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 GG+R+GVDI K++ LGA + PF+ + V A L E +M + G Sbjct: 266 VDGGIRSGVDIFKALALGADAVLIGRPFVTAVYGGGAEGVAAYTAKLAAELEDTMAMCGA 325 Query: 322 KRVQELYLN 330 + E+ + Sbjct: 326 HSLSEISRD 334 >gi|322835533|ref|YP_004215559.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rahnella sp. Y9602] gi|321170734|gb|ADW76432.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rahnella sp. Y9602] Length = 387 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 123/377 (32%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ + G+KL+ P++++ + TG + Sbjct: 29 AYNEHTLRRNTADLADIALRQRILK--NMSDLSLETQLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA K + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAKKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQP--------NGN 165 ++ GV+ V + A N LQ ++ P NG Sbjct: 141 LERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVMHPQWAWDVGLNGK 200 Query: 166 T-----------------NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 ++ + + P+++K + L Sbjct: 201 PHDLGNVSAYRGKPTTLEDYIGWLGANFDPSISWKDLEWIREFWKGPMIIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D + +K G ++ GG + + T +L +A Sbjct: 258 DAKDAVKFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + +A G+R G+D+++ I LGA L F+ A V+ + + KE V+M Sbjct: 300 DITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVINLLNLIEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + ++ ++ + Sbjct: 360 TLTGAKSIADISGDSLV 376 >gi|291524823|emb|CBK90410.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Eubacterium rectale DSM 17629] Length = 340 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 115/323 (35%), Gaps = 47/323 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + + + E VD S+ G+ +P+ + + + Sbjct: 47 RNYDKWKQIRVNMDTIAENKP--VDTSLSLFGRTFKYPVFAGPVGAVQLHYGDCLDDVTY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELRQYAPHTVLISNLGAVQLNYDFG 133 N L A K +A G +D N + ++ + V+ Sbjct: 105 NDILVSACAKNGIAAFTGDG----TDPNVMVAATKAIKNANGAG-----IPTVKPWNIET 155 Query: 134 VQKAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 +++ + VH GA + + ++ L+ + P G+ S++ + P ++ Sbjct: 156 IREKMELVHESGAFAVAMDIDAAGLPFLKNLDPPAGSKT----VSELCDIIQMAGTPFIV 211 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ ++G ++ GG + S ++ I + GI Sbjct: 212 KGI---MTVKGALKAKEAGASAIIVSNHGGRVLDQCPSTAEVLESIVKALEGSGI----- 263 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIES 307 + + GG+R+G D+ K++ LGA +A PF+ +D V A I+ Sbjct: 264 -----------KILVDGGIRSGTDVFKALALGADGVLIARPFVTAVYGGKADGVRAYIDK 312 Query: 308 LRKEFIVSMFLLGTKRVQELYLN 330 + E +M + G + E+ + Sbjct: 313 IGTELEDTMKMCGVSSLDEITRD 335 >gi|121702355|ref|XP_001269442.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] gi|119397585|gb|EAW08016.1| mitochondrial cytochrome b2, putative [Aspergillus clavatus NRRL 1] Length = 495 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 122/362 (33%), Gaps = 74/362 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R + E D + LG KL P+ +S +M G+ I Sbjct: 143 NTEVYRSILLRPRVF--VDCTECDLDISVLGHKLGMPIYVSPAAMARLGHPAGEAGI--- 197 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGA 125 A A A Q V + + + +++ ++ I L A Sbjct: 198 -AEACRSFGAMQIISNNASMTPEQIVKDAAPDQVFGWQIYVQIDRKKSEAMLARIKKLKA 256 Query: 126 VQ---LNYDFGVQKAHQAVHVLGADGLFLHLN-------------PLQEIIQPNGNTNFA 169 ++ L D V + G+ + + P + G FA Sbjct: 257 IKFIVLTLDAPVPGKREDDERGGSVAAVMSIPSAAKAADKVADGVPASGGV---GKQLFA 313 Query: 170 D------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L+ D+P++LK + + I ++ ++ GG + Sbjct: 314 GTDPTLTWKETLPWLAKHTDLPIILKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALDT 372 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIIL 279 P +L R YC E GG+R G D++K++ L Sbjct: 373 AP------------------PAVHTLMEIRKYCPEVFDKLDVWVDGGIRRGTDVVKALCL 414 Query: 280 GASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIR 335 GA G+ P L D V ++ L E I M LLG +RV+EL ++NT L+ Sbjct: 415 GAKAVGIGRPALWGLGAGGVDGVKRTLQILADETITCMRLLGVQRVEELGPHHINTRLVE 474 Query: 336 HQ 337 Q Sbjct: 475 QQ 476 >gi|126654918|ref|ZP_01726452.1| glycolate oxidase [Cyanothece sp. CCY0110] gi|126623653|gb|EAZ94357.1| glycolate oxidase [Cyanothece sp. CCY0110] Length = 378 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 127/359 (35%), Gaps = 62/359 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------G 66 + + N+K F+ + L + L + E++ S LG+ LS P+ ++ M Sbjct: 30 ALDEITLKNNRKSFETYQLYPKVL--VDVSEINLSTTLLGQTLSIPIGVAPMAFQCLAHP 87 Query: 67 GNNKMIERINRNL----------------AIAAEKTKVAMAV-------GSQRVMFSDHN 103 K ++ +L A ++ + G + + Sbjct: 88 QGEKATAKVLSDLKTLLILSTLSTTSLEEVAACQEHNLRWFQLYIHKDKGLTKALVERAE 147 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ----EI 159 + ++ + + F + ++ + +++ + L + + Q Sbjct: 148 KAG-YTAICVTVDAPMLGK-REIDIRNQFTLPESLKLANLVSLEDLAIPNSSNQSGLFAY 205 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 Q + + + L S +P++LK + L + D L +++G + ++ GG Sbjct: 206 FQQQIDPSLTW--KDLEWLQSITKLPIVLKGI---LRADDARLAVENGSKGIIVSNHGGR 260 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSII 278 I T +L ++ NE I GG+R G D+ K++ Sbjct: 261 QLDGA------------------ITTLEALPKIVETVGNEVDIIIDGGIRRGTDVFKALA 302 Query: 279 LGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA + P L ++ V +E L+ E +++M L G + ++ + L H Sbjct: 303 LGAKAVLIGRPILWGLTVNGEAGVNHVLELLKDELLLAMALSGCPSIADINDSFLLKDH 361 >gi|191637600|ref|YP_001986766.1| NAD-independent L-lactate dehydrogenase [Lactobacillus casei BL23] gi|190711902|emb|CAQ65908.1| NAD-independent L-lactate dehydrogenase [Lactobacillus casei BL23] gi|327381650|gb|AEA53126.1| hypothetical protein LC2W_0792 [Lactobacillus casei LC2W] gi|327384817|gb|AEA56291.1| hypothetical protein LCBD_0793 [Lactobacillus casei BD-II] Length = 368 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 123/343 (35%), Gaps = 68/343 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 RN F D ++ R L ++ D S F+G +L+ PLL + + G + + L Sbjct: 52 RNTTAFTDVQMLPRVLQG--VEKPDQSTTFMGARLASPLLTAPIAG---NTLAHPSGELG 106 Query: 80 -AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A A++ + + SQ F+ ++ + AP+ + + + + +A Sbjct: 107 LAKGAKEAGIMI---SQS-TFASKTIAETAAVSDGAPYMFQLY-MPKDWSYCQYLLDQAK 161 Query: 139 QAVHVLGADGLFL------------------HL----------NPLQEIIQPNG---NTN 167 QA GA + L HL N Q+ + G + Sbjct: 162 QA----GALAIILTADSTLGGYREKDVMNHYHLKGRLANLEGYNTGQQGVGAGGLFKESM 217 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + I L+S +P+++K + D + +G ++ GG Sbjct: 218 QKLDLATIDKLASYSGLPIIVKGIQH---PDDAVAAITAGAAGIYVSNHGGRQLDGAPGA 274 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + I + I GG++ G +LK++ LGA L G+ Sbjct: 275 IEALPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGADLVGIG 317 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 PF A+ + V A + ++ E ++M L G + + ++ Sbjct: 318 RPFSYGLALGGWEGVKAVADHMKMEINIAMQLTGCQTMADVKQ 360 >gi|119475775|ref|ZP_01616128.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119451978|gb|EAW33211.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2143] Length = 383 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 115/373 (30%), Gaps = 90/373 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---- 68 + + RN + F D+ +I L + + +D + LG L P ++ TG + Sbjct: 33 ADDEWTLLRNSQAFSDYQIIPNHL--RNIESIDLRTDILGTTLDLPFFLAP-TGMSRLFH 89 Query: 69 ----NKMIERINRN--------LAIAAEKTKVAMAVGS---QRVMFSDHNAIKSF----- 108 N LA ++ + A AVG Q + D + F Sbjct: 90 HHKEPAACRAANEAGTLYSLSTLATSSLEEVAACAVGPKMFQIYILKDRGLTREFVQRCK 149 Query: 109 ---------------------------------ELRQYAPHTVLISNLGAVQLNYDFGVQ 135 ++ + + L + N DF + Sbjct: 150 ESRYQALCLTVDTTIAGNRERDLRNGMTMPPKITMKNFFSYGSSFEWLFNLVKNPDFTLA 209 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 V L + + L + + + A L+ D P ++K + Sbjct: 210 NVAHRVDALEKNPMG-----LIDYVNSQFDRTITW--DDAAWLAEQWDGPFVIKGLQ--- 259 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D++ G ++ GG + + + R Sbjct: 260 SVADVKKARDIGATAVMVSNHGGRQLDGAPAP------------------VDCISVLRDA 301 Query: 256 CN-EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFI 313 + + I GG+R G DI+K+I LGA + P+L A V AI L+ E Sbjct: 302 IGADLELICDGGIRRGTDIIKAIGLGADACSIGRPYLYGLAAGGQPGVARAIHLLKTEVE 361 Query: 314 VSMFLLGTKRVQE 326 S+ L+G + E Sbjct: 362 RSLGLMGCCSIDE 374 >gi|16226772|gb|AAL16258.1|AF428328_1 AT3g14420/MOA2_2 [Arabidopsis thaliana] Length = 367 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 117/370 (31%), Gaps = 98/370 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDASKIDMTTTVLGFKISMPIMVAPTAMQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 87 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAER 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + K +A Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNF------EGLDLGKMDEAND 196 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + + + + L + +P+L+K V L+ D + Sbjct: 197 SGLASYVA-----------GQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDARI 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRIPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSG 342 Query: 321 TKRVQELYLN 330 + ++E+ N Sbjct: 343 CRSLKEISRN 352 >gi|317143442|ref|XP_001819479.2| cytochrome b2 [Aspergillus oryzae RIB40] Length = 468 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +N K F L R L I V + LGK++S P+ +S++ G K+ Sbjct: 132 AEGEISKRQNSKAFQKVSLRPRILRSI--PTVVTTTTILGKQVSLPVYMSAV--GIAKLA 187 Query: 73 ERI-NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R LA AA K +A + +N I+S + +P + L V + Sbjct: 188 HPDGERALAAAAGKEGLAQVL-----ANGANNVIESVMDARTSPEQPIFQQL-YVNRDIT 241 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP-------------LQEIIQPNGNTNFADL------- 171 +A GA +++ ++ LQ + + + + Sbjct: 242 KSEDVVRRA-ERAGASAIWITVDSPVVGKREMDERINLQVEARDDPSRKGQGVAKTMANF 300 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + L +P+++K + C D G++ ++ GG S + Sbjct: 301 ISPFIDWDILLWLRGLTKLPIVIKGIQC---VEDAVQAYHYGVQGIVLSNHGGRSQDTAQ 357 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILG 280 + L+L R Y + Q GG+R G D+LK+I LG Sbjct: 358 AP------------------LLTLLEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALG 399 Query: 281 ASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL P L A V A+E LR+E +M LG ++EL Sbjct: 400 ATAVGLGRPTLYSLAAGYGEQGVRRAVEILRQEIESNMVFLGVTNLKEL 448 >gi|145361806|ref|NP_850585.2| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332641998|gb|AEE75519.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 367 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 118/370 (31%), Gaps = 98/370 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N+ F R L I ++D + LG K+S P++++ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHP 86 Query: 64 ----------------MTGGNNKMI----------------------ERINRNLAIAAEK 85 MT + + L AE+ Sbjct: 87 DGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAER 146 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +A+ V + R+ + + F L P + + N + K +A Sbjct: 147 AGFKAIALTVDTPRLGRRESDIKNRFTL----PPNLTLKNF------EGLDLGKMDEAND 196 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + + + + L + +P+L+K V L+ D E+ Sbjct: 197 SGLASYVA-----------GQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDGEI 240 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 +++G ++ G + + T +LE + Sbjct: 241 AIQAGAAGIIVSNHGARQLDYVPA------------------TISALEEVVKATQGRIPV 282 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G Sbjct: 283 FLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSG 342 Query: 321 TKRVQELYLN 330 + ++E+ N Sbjct: 343 CRSLKEISRN 352 >gi|300871247|ref|YP_003786120.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brachyspira pilosicoli 95/1000] gi|300688948|gb|ADK31619.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brachyspira pilosicoli 95/1000] Length = 337 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 116/317 (36%), Gaps = 36/317 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERI 75 RN + + L + S ++VD S E GKK +P+ + GN E Sbjct: 46 RNYDKWREIRLNMDTIS--SNEDVDTSFELFGKKFKYPIFAGPVGAVKLHYGNKYEEEEY 103 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L + +A G ++ N + + + + I + ++ ++ Sbjct: 104 NDILVKSCANAGIAAFTGDG----TNPNVMIAATTMIKKQNGIGIPTVKPWNIDV---IK 156 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSKIALLSSAMDVPLLLKEVGCG 194 + + V A + + ++ N + ++ + + P ++K + Sbjct: 157 EKMKLVADSNAFAVAMDVDAAGLPFLKNLTPKAGSKTVDELRQIKEIANRPFIIKGI--- 213 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 +++ + +++G ++ GG + S ++ +I Sbjct: 214 MTAKGAKKAVEAGADAIIVSNHGGRVLDQCPSTAEVLPEI-----------------VDA 256 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFI 313 + + + GG+R+G DILK++ +GA +A F+ + V + + L E Sbjct: 257 VKGKIKILVDGGIRSGADILKALAIGADGVVIARTFVIAVYGGAEEGVESYVAQLGAELE 316 Query: 314 VSMFLLGTKRVQELYLN 330 +M + G ++E+ + Sbjct: 317 DAMTMCGVHSLKEITRD 333 >gi|255576595|ref|XP_002529188.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223531366|gb|EEF33202.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 364 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 111/348 (31%), Gaps = 53/348 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F R L + + LG +S P++I+ +K+ Sbjct: 31 AEDQHTLKENVQAFKKITFRPRIL--VDISRIAMPTTILGYTISAPIMIAPTA--MHKLA 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + V S S S ++ R A V + Sbjct: 87 HPEGEIATARAAAASNTVMVLSFSATCSLEEVAASCNAVRFFQLYVYKRRDIAAKLVQRA 146 Query: 122 N---LGAVQLNYD---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--------- 166 A+ L D G ++A + L E++ G+ Sbjct: 147 ERNGYKAIVLTADCPRLGRREADIKNKMFVPQLKNLEGLLSTEVVSEKGSGLEAYANETF 206 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + + L S ++P+L+K V L+ D ++ G+ ++ G + Sbjct: 207 DASLCWKDVGWLKSITNLPILIKGV---LTPEDAVKAMEVGVAGIIVSNHGARQLDYSPA 263 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 T +LE + + GG+R G D+ K++ LGA Sbjct: 264 ------------------TISALEEVVHAVGGKIPVLLDGGVRRGTDVFKALALGAQAVL 305 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A+ D V ++ L+ E ++M L G ++ + + Sbjct: 306 VGRPVIYGLAVKGEDGVRQVMKMLKDELELAMALSGCPSLKHITRSHV 353 >gi|291528855|emb|CBK94441.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Eubacterium rectale M104/1] Length = 340 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 114/321 (35%), Gaps = 43/321 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + + + E VD S+ G+ +P+ + + + Sbjct: 47 RNYDKWKQIRVNMDTIAENKP--VDTSLSLFGRTFKYPVFAGPVGAVQLHYGDCLDDVTY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A + +A G +D N + + I + + ++ Sbjct: 105 NDILVSACAENGIAAFTGDG----TDPNVMVAATNAIKNADGAGIPTVKPWNIE---TIR 157 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + VH GA + + ++ L+ + P G+ S++ + P ++K Sbjct: 158 EKMELVHESGAFAVAMDIDAAGLPFLKNLDPPAGSKT----VSELCDIIQMAGTPFIVKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ ++G ++ GG + + ++ I + GI Sbjct: 214 I---MTVKGALKAKEAGASAIIVSNHGGRVLDQCPATAEVLESIVKALEGSGI------- 263 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 + + GG+R+G D+ K++ LGA +A PF+ +D V A I+ + Sbjct: 264 ---------KILVDGGIRSGTDVFKALALGADGVLIARPFVTAVYGGKADGVRAYIDKIG 314 Query: 310 KEFIVSMFLLGTKRVQELYLN 330 E +M + G + E+ + Sbjct: 315 TELEDTMKMCGVSSLDEITRD 335 >gi|258568286|ref|XP_002584887.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237906333|gb|EEP80734.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 428 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 114/337 (33%), Gaps = 55/337 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-N 78 D NK F D + R L + EVD + LG + PL +S K++ Sbjct: 71 DANKSFLDRIFMRPRVL--RNVREVDTRTKILGCDVDMPLFVSPSA--MVKLMHPDGELA 126 Query: 79 LAIAAEKTKVAMAVGSQRVM------FSDHNAIKSFEL----RQYAPHTVLI-----SNL 123 +A A + + + + + F+L + +L + Sbjct: 127 IARACDSRNLVQGISNNASYPMKDITAAGPGTDYFFQLYVNWDRAKSEVLLRECSANPRI 186 Query: 124 GAVQLNYDFGVQKAHQAVHVLGAD-------GLFLHLNPLQEIIQPN---GNTNFADLSS 173 A+ + D +A + AD N + G + + Sbjct: 187 KAIFITVDAAWPGKREADERVRADEGITVPMADAETRNDEKGGGLGRVMAGCIDPGLTWA 246 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +PL+LK V +S+ D L +++G+ ++ GG + + Sbjct: 247 DLVWARRHTHLPLILKGV---MSADDAILAMEAGMDGILLSNHGGRNLDTSPA------- 296 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++L C E + G+R G DILK + LGA+ G+ Sbjct: 297 -----------SIITLLELHKRCPEVFDKMEVYVDSGIRRGTDILKCLCLGATAVGMGRS 345 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L + + V ++ +R E +M L+G + + Sbjct: 346 VLFASNYGQEGVEHLLDIMRDELEGAMRLVGITSINQ 382 >gi|295659737|ref|XP_002790426.1| peroxisomal (S)-2-hydroxy-acid oxidase [Paracoccidioides brasiliensis Pb01] gi|226281603|gb|EEH37169.1| peroxisomal (S)-2-hydroxy-acid oxidase [Paracoccidioides brasiliensis Pb01] Length = 410 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 126/378 (33%), Gaps = 88/378 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SM---TGG 67 ++ + RN+ FD L R L VD S LGKK S P+ IS +M GG Sbjct: 46 ADEENALRRNRGAFDRLILRPRVL--RDVSRVDTSTTLLGKKYSIPIGISPSAMQRLAGG 103 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIKS----FEL-------- 110 N ++ ++A AA M + S + + S F+L Sbjct: 104 NGEI------DMARAAASRGTTMILSSHTTCALEDVIRAPDGGSSVDFWFQLYISQNRER 157 Query: 111 ------RQYAP---------HTVLISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLF 150 R A T ++ N A+ L + HQ ++ +G Sbjct: 158 CAQVIGRAEAAGYKALVLTVDTPILGNRINERKTALILPPHLSLANLHQTINQSSPEGNS 217 Query: 151 LHLNP-----------LQEIIQ-PNGNTNFAD-----LSSKIALLSSAMDVPLLLKEVGC 193 P QE + GN + + S+ I+ L S + ++LK + Sbjct: 218 PQAKPTMNRILLEARNAQEAAKIARGNHDTLNDSSLTWSNTISWLRSKSSLKIILKGI-- 275 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 +++ D L + G ++ GG + S + +I Sbjct: 276 -MTAEDALLAIDYGADAVIVSNHGGRQLDSVSSTIEALPEI-----------------VS 317 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEF 312 I G+ G D+ K++ LGA + L + V+ ++ L +E Sbjct: 318 AVRGRIPVIIDSGITRGSDVFKALALGADFTLVGRSALWGLSFGGQEGVIRVLDILEREL 377 Query: 313 IVSMFLLGTKRVQELYLN 330 +M L G V E+ + Sbjct: 378 SRTMALAGAGTVGEIRRS 395 >gi|229553728|ref|ZP_04442453.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus rhamnosus LMS2-1] gi|258538867|ref|YP_003173366.1| L-Lactate dehydrogenase [Lactobacillus rhamnosus Lc 705] gi|229312899|gb|EEN78872.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus rhamnosus LMS2-1] gi|257150543|emb|CAR89515.1| L-Lactate dehydrogenase [Lactobacillus rhamnosus Lc 705] Length = 368 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 123/349 (35%), Gaps = 72/349 (20%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + RN F D H++ R L + D S F+G KL+ PLL + + + + + Sbjct: 48 YTMHRNTTAFQDVHMLPRVLQG--VENPDQSTTFMGAKLASPLLTAPIA---SNTLAHPS 102 Query: 77 RNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 L A A++ + M SQ F+ ++ + AP+ + + + + Sbjct: 103 GELGLAKGAKEAGIMM---SQS-TFASKTIAETAAVSDGAPYMFQLY-MPKDWEYCQYLL 157 Query: 135 QKAHQAVHVLGADGLFL------------------HL----------NPLQEIIQPNGNT 166 +A QA GA + L HL N Q + G Sbjct: 158 DEAKQA----GALAIILTADSTLGGYREKDVMNHYHLKGRLANLEGYNTGQSGVGAGGL- 212 Query: 167 NFADLSSK-----IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 F + K I+ L+S +P+++K + D + +G ++ GG Sbjct: 213 -FKESMQKLDLGLISKLASYSGLPIIIKGIQH---PADAVAAITAGAAGIYVSNHGGRQL 268 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + I + I GG++ G +LK++ LGA Sbjct: 269 DGAPGAIEQLPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGA 311 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L G+ PF A+ V + L+ E ++M L G + + ++ Sbjct: 312 DLVGIGRPFSYGLALGGWQGVKDVADHLKMEINIAMQLTGCQTMADVKQ 360 >gi|224074053|ref|XP_002304232.1| predicted protein [Populus trichocarpa] gi|222841664|gb|EEE79211.1| predicted protein [Populus trichocarpa] Length = 364 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 114/348 (32%), Gaps = 53/348 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N + F L+ R L + + S LG +S P++I+ + Sbjct: 31 AEDEHTLKKNVQEFQRIILLPRVL--VDVSSIALSTNILGYTISAPIMIAPTA---LHKL 85 Query: 73 ERINRNLAIAAEKT---KVAMAVGSQRVMFSD----HNAIKSFEL-----RQYAPHTVLI 120 LA A + S + +A++ F+L R A + V Sbjct: 86 AHPEGELATARAAAACNTIMTLSFSASCSVEEVAASCDAVRFFQLYVYKRRDIAVNLVQR 145 Query: 121 S-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ--------------PNGN 165 + G + + + + + L L+ ++ N Sbjct: 146 AEKSGYKAIVLTADAPRLGRREADIKNKLIVPQLKNLEGLMSIEVVSVKGSNFEAYANET 205 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + IA L S ++P+L+K + L+ D ++ G ++ G Sbjct: 206 IDSSLCWRDIAWLKSITNLPILIKGI---LTREDAIEAMEVGAAGIIVSNHGARQLDYTP 262 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ + + GG+R G D+ K++ LGA Sbjct: 263 ATISVLEEV-----------------VQAVGRRVPVLLDGGVRRGTDVFKALALGAQAVL 305 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A V + L+ E ++M L G V+++ + Sbjct: 306 VGRPVIYGLAAKGEAGVRKVMHMLKDELELTMALAGCPSVKDISRSHV 353 >gi|212538281|ref|XP_002149296.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] gi|210069038|gb|EEA23129.1| mitochondrial cytochrome b2, putative [Penicillium marneffei ATCC 18224] Length = 498 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 115/358 (32%), Gaps = 71/358 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LAIAAEKT 86 L R I + D S +G K+ P+ +S ++ +A A Sbjct: 148 SIFLRPRVF--IDVGKCDLSTTIVGHKVGLPIYVSPAA--MARLAHPSGEAGIAAACRGF 203 Query: 87 KV-------AMAVGSQRVMFSDHNAIKSFELR------QYAPHTVLISNLGAVQ---LNY 130 A Q V + + + ++L + I L A++ L Sbjct: 204 GAMQMISNNASMSPEQIVENAAPDQVFGWQLYVQIERHKSEAMIARIEKLKAIKCIILTL 263 Query: 131 DFGVQKAHQA-----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFAD--- 170 D V + V A+ L ++ G FA Sbjct: 264 DAPVPGKREDDMRTDNTAKKLPVLSSKVVEEKAETLPDGTPVPKDGGGGVGQQLFAGTAY 323 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + L+ +P++LK + + I +R ++ GG + Sbjct: 324 DLTWKETLQWLTKVTKLPIILKGLQTHEDAY-IASLYAPQVRGIILSNHGGRALDTAP-- 380 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P +L R YC E + + GG+R G D++K++ LGA Sbjct: 381 ----------------PAVHTLLEIRKYCPEVFDKIEVLVDGGIRRGTDVVKALCLGARA 424 Query: 284 GGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ P L + V +E L E M LLG ++V +L Y+N+ ++ Q Sbjct: 425 VGIGRPALWGLGAGGIEGVHRTLEILADETKTCMQLLGVEKVSDLGPEYINSRIVEQQ 482 >gi|88860781|ref|ZP_01135418.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudoalteromonas tunicata D2] gi|88817376|gb|EAR27194.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudoalteromonas tunicata D2] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 115/335 (34%), Gaps = 46/335 (13%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL---------------ISSM 64 N+ F W LI R L ++ V LG+ FP+L + SM Sbjct: 44 QANESAFARWQLIPRVLSG--VTNINTQVNLLGQMHQFPMLLAPVAYQKLAHPSGEVGSM 101 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSFELRQYAPHTVL 119 G + I I LA A + + Q + + + L Q A + Sbjct: 102 QGAAAQDIGYILSTLASTALEEVI---DYKQSADCWFQLYVQPDWHDTLALIQRAEYAGY 158 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + + V + + +A VL A +++ Q N A I + Sbjct: 159 SALVITVDAPINGLRNREQRAGFVLPAGVSAVNITATQSPQGLQACLNAAPTWQTIKQIM 218 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++ +P++LK + ++ D L + G+ ++ GG + + + S Sbjct: 219 ASTHLPVILKGI---IAVEDAMLAKELGVAGIVVSNHGGRVLDTMPASVMMLS------- 268 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSS 298 + + N+ + G+R G DI K++ LGA + P + A Sbjct: 269 ----------LIRQAVGNDFLILCDSGIRRGSDIFKALALGADAVLIGRPIMYALATAGP 318 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 V + L+ E ++M L G + ++ + Sbjct: 319 LGVAHMLRILKDELQLTMALCGCASIADISTKHLI 353 >gi|242807022|ref|XP_002484865.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] gi|218715490|gb|EED14912.1| mitochondrial cytochrome b2, putative [Talaromyces stipitatus ATCC 10500] Length = 496 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/348 (18%), Positives = 116/348 (33%), Gaps = 71/348 (20%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNLAIAAEKTKV-------A 89 I + D S LG ++ P+ IS +M + E +A A A Sbjct: 156 IDVGKCDLSTTILGHRVGLPIYISPAAMARLAHPAGE---AGIAAACRGFGAMQMISNNA 212 Query: 90 MAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ---LNYDFGVQKAHQA 140 Q V + + + ++L ++ + L A++ L D V + Sbjct: 213 SMSPEQIVENAAPDQVFGWQLYVQMERKKSEAMLARVEKLKAIKCVILTLDAPVPGKRED 272 Query: 141 VHVLGADGLFLHLNPLQEI-----IQPNGNTN------------FAD------LSSKIAL 177 G L ++ + P+G FA + Sbjct: 273 DMRTDNIGKKLPVSSAKVAEKEVETLPDGTPVPTDGGGGVGKQLFAGTAYDLTWKETLTW 332 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L+ +P++LK + + I ++ ++ GG + Sbjct: 333 LTKVTKLPIILKGLQTHEDAY-IASLYAPQVKGIILSNHGGRALDTAP------------ 379 Query: 238 FQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 P +L R YC E + + GG+R G D++K++ LGA G+ P L Sbjct: 380 ------PAVHTLLEIRKYCPEVFDKIEVLVDGGIRRGTDVVKALCLGARAVGIGRPALWG 433 Query: 294 AMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 V +E L E M LLG +++ +L Y+N+ ++ Q Sbjct: 434 LGAGGIAGVERTLEILADETKTCMQLLGVEKISDLGPEYINSRIVEQQ 481 >gi|238490005|ref|XP_002376240.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] gi|220698628|gb|EED54968.1| mitochondrial cytochrome b2, putative [Aspergillus flavus NRRL3357] Length = 494 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 112/350 (32%), Gaps = 69/350 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R I + D LG KL P+ +S +M G+ I Sbjct: 142 NTEVYRSILLRPRVF--IDCTQCDLDTTLLGHKLGMPIYVSPAAMARLGHPAGEAGI--- 196 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN---- 122 A A A Q V + + + +++ R+ + + N Sbjct: 197 -AEACRSFGAMQVISNNASMTPEQIVKDAAPDQVFGWQIYVQIDRKKSEAMLARINKLKQ 255 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPNGNTN-------------F 168 + + L D V + A G + + + T+ F Sbjct: 256 IKFIVLTLDAPVPGKREDDERGNAIGASAPVPSAAKAADSAEDETSRINQSSGGVGKQLF 315 Query: 169 AD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 A + L+ ++P++LK + + I ++ ++ GG + Sbjct: 316 AGTDPSLTWKETLPWLAERTNLPIILKGLQTHEDAY-IASLHTPQVKGIILSNHGGRALD 374 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P +L R YC E + GG+R G D++K++ Sbjct: 375 TAP------------------PAVHTLMEIRKYCPEVFDRLEVWVDGGIRRGTDVVKALC 416 Query: 279 LGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ P L D V ++ L E M LLG + V +L Sbjct: 417 LGAKAVGIGRPALWGLGAGGVDGVKRTLQILADESKTCMRLLGVETVDKL 466 >gi|67901994|ref|XP_681253.1| hypothetical protein AN7984.2 [Aspergillus nidulans FGSC A4] gi|40739597|gb|EAA58787.1| hypothetical protein AN7984.2 [Aspergillus nidulans FGSC A4] gi|259480735|tpe|CBF73650.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 503 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 117/365 (32%), Gaps = 80/365 (21%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 +N + L R L + +V +G + S P+ I+ + + Sbjct: 142 SFHKNLTDWSKIALRPRIL--RNVSKVSLGRTIMGHRSSLPVFIAPTA---RAKLGHPDG 196 Query: 78 N--LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN--LGAV--QLNYD 131 LA AA + + AV S + F +++ + + GA+ QL Sbjct: 197 EVCLARAAARHNILYAVSSY-ASIGHAELAEEF-VKEKTRLVPISARSAQGALGFQLYLP 254 Query: 132 FGVQKAHQAV----HVLGADGLFLHLNP-------LQEIIQPNGN--------------- 165 + ++ +A+ LG L + ++ E Q Sbjct: 255 YDKERGGRALIAKAKDLGFQALVVTVDTPVVGKREADERFQAELEVISSDRAAVQVNVPR 314 Query: 166 -----------TNFADL---SSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRY 210 F I + A PL++K + ++ D ++GI Sbjct: 315 KAEPGGDAPVLRGFHSSSLEWDDIPWIREAWGPQPLIIKGIQ---TAEDALRASEAGIDG 371 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGG 266 ++ GG + +L +C E + GG Sbjct: 372 IYLSNHGGRQLDYAP------------------SSIQTLLEINRFCPEVLKRVEVYLDGG 413 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++K+I LGA GL P L + V A++ L E S+ L+G V Sbjct: 414 VRRGTDVIKAICLGAKGVGLGRPLLYALSGYGTGGVDKALQILSDEIETSLRLMGVVDVS 473 Query: 326 ELYLN 330 EL L+ Sbjct: 474 ELDLS 478 >gi|294791270|ref|ZP_06756427.1| lactate 2-monooxygenase [Scardovia inopinata F0304] gi|294457741|gb|EFG26095.1| lactate 2-monooxygenase [Scardovia inopinata F0304] Length = 368 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 109/350 (31%), Gaps = 57/350 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKM 71 + + N K FD ++ R+L + G + P+++S G Sbjct: 44 AEDEWTLRENTKAFDHVQIVPRSL--NDMENPSTETSVYGIPMKMPIMMSPAAAQGLAHA 101 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-------NLG 124 + +AA T +A + + + + AP + N Sbjct: 102 RGEMATAEGMAAAGTIIAQSTYG------NTTIADTARAGKGAPQFFQLYMSKDWNFNKA 155 Query: 125 AVQLNYDFGVQKAHQAVHV-LGADGLFLHLNPLQ-EIIQPNGNTNF------ADLS---- 172 + G++ V +G +N Q + N +S Sbjct: 156 LLNEAVQAGIKAIILTVDATVGGYREADRINNFQFPLSMANLERYASVDGEGKGISEIYA 215 Query: 173 --------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + ++ +P+++K + D E +++G + ++ GG + Sbjct: 216 AAAQKIGPDDVRRIAEYTHLPVIVKGIQ---DPEDAERAIQAGAQGVWVSNHGGRQLNGG 272 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D+ + + G+R G + K++ GA + Sbjct: 273 PASFDMLKSVAD-----------------QVNHRVPVFFDSGIRRGSHVFKALASGADIV 315 Query: 285 GLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LA P + A+ + + +E L E + M L GTK + ++ + Sbjct: 316 ALARPVIFGLALGGAQGAQSVVEHLNDELKIDMQLAGTKTIDDVKHAKLV 365 >gi|296127339|ref|YP_003634591.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brachyspira murdochii DSM 12563] gi|296019155|gb|ADG72392.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brachyspira murdochii DSM 12563] Length = 337 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 114/316 (36%), Gaps = 36/316 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERI 75 RN + + L + S +++D S E GKK +P+ + G+ E Sbjct: 46 RNYDKWREIRLNMDTI--CSNEDIDTSFELFGKKFKYPIFAGPVGAVQLHYGDKYTEEEY 103 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L + + +A G ++ N + + + + I + ++ ++ Sbjct: 104 NDILVKSCHEAGIAAFTGDG----TNPNVMIAATTMIKKQNGIGIPTVKPWNMDV---IK 156 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF-ADLSSKIALLSSAMDVPLLLKEVGCG 194 + + V A + + ++ N + ++ + P ++K + Sbjct: 157 EKMKLVADSNAFAVAMDVDAAGLPFLKNLTPKAGSKTVDELRQIKEIAQRPFIIKGI--- 213 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ + L++G ++ GG + S ++ +I Sbjct: 214 MTVKGAKKALEAGADAIIVSNHGGRVLDQCPSTAEVLPEIAD-----------------A 256 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFI 313 + + + GG+R+G DILK++ +GA +A F+ A + V + L E Sbjct: 257 VKGKIKILVDGGIRSGADILKALAIGADGVVIARTFVIAAYGGGEEGVKSYAAQLGAELE 316 Query: 314 VSMFLLGTKRVQELYL 329 +M + G ++E+ Sbjct: 317 DAMTMCGVHSLKEITR 332 >gi|225567876|ref|ZP_03776901.1| hypothetical protein CLOHYLEM_03949 [Clostridium hylemonae DSM 15053] gi|225163354|gb|EEG75973.1| hypothetical protein CLOHYLEM_03949 [Clostridium hylemonae DSM 15053] Length = 339 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 104/299 (34%), Gaps = 44/299 (14%) Query: 44 VDPSVEFLGKKLSFPLL---ISSMTGGNNKMIERI--NRNLAIAAEKTKVAMAVGSQRVM 98 VD + E GK +P+ I +M + + N L A +A G Sbjct: 70 VDMTFEVFGKTFKYPVFAAPIGAMKLHYGDKYDDLEYNDILVSACADAGIAAFTGDG--- 126 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--- 155 ++ + +K+ I + +N +++ V G + ++ Sbjct: 127 -TNPDVMKAAAKAIGRKEGRGIPTIKPWDIN---TLKEKFALVKEAGPFAAAMDIDAAGL 182 Query: 156 --LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 L+ + P G+ ++ + + VP ++K V ++ ++G + Sbjct: 183 PFLKNLTPPAGSKT----VEELKEIVAEAGVPFVIKGV---MTVKGALKAKEAGAAAIVV 235 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + GG + + T LE A ++ + GG+R+GVD Sbjct: 236 SNHGGRVLDQCPA------------------TAEVLEEIAEAAGSDMKVFVDGGIRSGVD 277 Query: 273 ILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 I K++ LGA + P++ + V A L E +M + G + E+ + Sbjct: 278 IFKALALGADAVLIGRPYVTAVYGGGAEGVAAYTSRLAAELSDTMAMCGAHSLDEITRD 336 >gi|78355797|ref|YP_387246.1| FMN-dependent family dehydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218202|gb|ABB37551.1| dehydrogenase, FMN-dependent family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 340 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 111/306 (36%), Gaps = 37/306 (12%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---- 83 + LIH A+ + D SV LG LS P++ + + G + M I + A Sbjct: 56 NMRLIHDAV------QPDTSVTVLGIPLSMPVMAAPIGGVSFNMGGGITEEEYVNAILGG 109 Query: 84 -EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH-QAV 141 + V G F + + + G D + +A A Sbjct: 110 CRQQGVIGCTGDGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGE---ELDQKLDRALASAC 166 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 +G D L L+++ +P + + A +LK + ++ +D + Sbjct: 167 PAVGMDIDAAGLVTLRKMGRP-VSPKTPAQLKAVVDKVHAAGRTFILKGI---MTVVDAQ 222 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L ++ G ++ GG ++ +I Sbjct: 223 LAVEVGADAIVVSNHGGRVLDHTPGAAEVLPEIAD-----------------AVKGRITV 265 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 +A GG+R+G D++K + LGA + PF A+ + V A +E+LR + + +M L G Sbjct: 266 LADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVGGQAEGVAAYLEALRGQLVQAMVLTG 325 Query: 321 TKRVQE 326 + VQE Sbjct: 326 CRSVQE 331 >gi|193693082|ref|XP_001948314.1| PREDICTED: hydroxyacid oxidase 1-like [Acyrthosiphon pisum] Length = 365 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 117/348 (33%), Gaps = 56/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 C + + N K F+ ++ R L D S+ G K++ P+ IS +M + Sbjct: 31 ACDEYTLSINNKAFNKLRIVPRML--RDVRNRDLSITIQGDKVNVPIGISPCAM---HKM 85 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFELRQYAPHTVLISNL- 123 E A AA K + + + N +K F+L Y + S + Sbjct: 86 AHEDGECASARAAGKHGAIFILSTLSTCSLEEVATAAPNTVKWFQLYIYKDRVLTTSLIR 145 Query: 124 -------GAVQLNYDFGVQKAH-QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---- 171 A+ L D V + + + L L E + TN + L Sbjct: 146 RAEKSGYKALVLTVDAPVFGIRYKDIKNNFSLPSRLRLGNFSEELSVMNQTNGSGLTKYV 205 Query: 172 ---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 I L S D+P+++K + LS+ D ++ G ++ GG Sbjct: 206 MSLFDDRLVWDDIKWLKSITDLPIIVKGI---LSAADAKIAADLGCDGVFVSNHGGRQLD 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + ++ I AR + G+R+G D+ K++ LGA Sbjct: 263 TAPATIEVLPSI-----------------AREVGHRVDIYLDCGIRHGTDVFKALALGAK 305 Query: 283 LGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + LA P L D + EF +M L G + ++ Sbjct: 306 MVFLAQPILWGLTYDGQKGAEDVFGIVVNEFDNTMALAGCASLDQIKK 353 >gi|239994576|ref|ZP_04715100.1| L-lactate dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 377 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 61/373 (16%), Positives = 118/373 (31%), Gaps = 79/373 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 ++ + RN+ D L + L + +D S G++L+ P+ ++ + TG + Sbjct: 29 AYREHTLKRNETDLADIALKQQVL--RNMSSLDLSTTVFGEQLALPIALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLI 120 E A AA + + + + + LR + + + Sbjct: 87 RGEV---QAAKAAANKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLRDRGFMKNVLER 143 Query: 121 SNLGAVQ---LNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPN------------- 163 + V D V A G G LQ + P Sbjct: 144 AKAAGVTTLVFTVDMPVPGARYRDKHSGMSGPFAASRRVLQAMTHPRWAFDVGVFGKPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + D P+++K + L+ D + Sbjct: 204 LGNISTYRGEPTQLEDYIGWLGANFDPSISWKDLEWIREFWDGPMIIKGI---LTEQDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 L G ++ GG + + T +L +A + Sbjct: 261 DALSFGAEGIVVSNHGGRQLDGV------------------LSTAKALPAIASAVKGDLS 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+RNG+D+++ + LGA L F+ A + V ++ ++E V+M L Sbjct: 303 IFVDSGIRNGLDVVRMLALGADCTLLGRSFIYALAAEGQQGVENLLDLYKQEMHVAMTLC 362 Query: 320 GTKRVQELYLNTA 332 G K V EL L++ Sbjct: 363 GAKSVSELNLDSL 375 >gi|327352621|gb|EGE81478.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis ATCC 18188] Length = 511 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 118/355 (33%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + D + LG KL P+ + ++ + +A Sbjct: 161 NNTIYRSILLRPRVF--VDCTNCDLTTIALGHKLGLPIYVCPAA--MARLAHPVGEAGIA 216 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----LG 124 A K A + V + + + +++ R+ + + N + Sbjct: 217 AACSKFGAMQLISNNASMTPEEIVQNATPDQVFGWQIYVQTQRKKSEAMLARINKLKSIK 276 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPN-------GNTNFAD------ 170 V L D V + A + N L+E G FA Sbjct: 277 FVCLTLDAPVPAKREHDERTRAVAQATSVFNLLRESGGTPIEGGAGIGQQLFAGTDPSLT 336 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 S+ + L+ ++P++LK + + I ++ ++ GG S Sbjct: 337 WSTTLPWLAQHTNLPIVLKGIQTHEDAY-IASLHAPQVKAIILSNHGGRSMDTAP----- 390 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P +L R +C E + GG++ G D++K++ LGA G+ Sbjct: 391 -------------PAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGI 437 Query: 287 AS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 P + V +E L E +M LLG +V++L ++N + Q Sbjct: 438 GRAPLFGLGAGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 492 >gi|331090755|ref|ZP_08339602.1| hypothetical protein HMPREF9477_00245 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399863|gb|EGG79522.1| hypothetical protein HMPREF9477_00245 [Lachnospiraceae bacterium 2_1_46FAA] Length = 339 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 100/293 (34%), Gaps = 36/293 (12%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-----LAIAAEKTKVAMAVGSQRVMF 99 D + GK +PL + N ++ N L A + +A G + Sbjct: 69 DTTFNVFGKTFRYPLFAGPVGAVNLHYGKKYNDESYNNILVSACAEAGIAAMTGD--GVN 126 Query: 100 SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-LQE 158 + + + +++ + ++ +++ + GA + + ++ Sbjct: 127 ENVMQVATEAIKKANGIG-----IPTIKPWDMEKIKEKMKLADASGAFAVAMDIDASGLP 181 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 +Q + ++ ++ + P ++K + ++ +G ++ GG Sbjct: 182 FLQAENSGAGKKSVEELHRIAKSTYAPFIVKGI---MAVRGALKAESAGADAIVVSNHGG 238 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSI 277 + + T LE A + + GG+R+G D+ K+I Sbjct: 239 RVLDQCPA------------------TAEVLEEIANAVKGKMKIFVDGGIRSGADVFKAI 280 Query: 278 ILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 LGA + PF+ + V IE + +E +M + G ++E+ Sbjct: 281 ALGADGVIICRPFVTALYGGGEEGVKLYIEKIGQELADAMEMCGANSLKEITK 333 >gi|302507398|ref|XP_003015660.1| FMN-dependent dehydrogenase family protein [Arthroderma benhamiae CBS 112371] gi|291179228|gb|EFE35015.1| FMN-dependent dehydrogenase family protein [Arthroderma benhamiae CBS 112371] Length = 333 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 104/322 (32%), Gaps = 74/322 (22%) Query: 50 FLGKKLSFPLLISSMTGG---NNKMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHN 103 LG +S P +++ G + + R A +A + V Sbjct: 1 MLGTPVSAPFYVTATALGKLGHPDGEVCLTRASATHDVVQMIPTLASCSFDEIVDAKTDK 60 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 + +L + ++ + G GLF+ ++ Q + Sbjct: 61 QTQWLQLYVNKDRAI---------------TRRIVEHAEARGCKGLFITVDAPQLGRREK 105 Query: 164 GNT-NFAD------------------------------------LSSKIALLSSAMDVPL 186 FAD + S +P+ Sbjct: 106 DMRSKFADQGSSVQATTASSSSAAAVDRSQGAARAISSFIDPSLSWKDLPYFRSITKMPI 165 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 LK V D+ +++GI ++ GG S +L +D+ + Sbjct: 166 ALKGVQR---VDDVLRAVEAGIDAVVLSNHGGRQLEYAPSAIELLADVMPALR------- 215 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAI 305 AR + + + GG+R DILK++ LGA G+ PFL + ++ V A+ Sbjct: 216 -----ARGWDRKIEVYIDGGVRRATDILKAVCLGAKGVGIGRPFLYAMSAYGTEGVEKAM 270 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 + L+ E ++M LLG + +L Sbjct: 271 QLLKDEMEMNMRLLGCTSIDQL 292 >gi|227824986|ref|ZP_03989818.1| L-lactate oxidase [Acidaminococcus sp. D21] gi|226905485|gb|EEH91403.1| L-lactate oxidase [Acidaminococcus sp. D21] Length = 397 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 110/353 (31%), Gaps = 67/353 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N + FDD +I R L +S D S G L P++ + G + Sbjct: 71 DEWTLRENTRAFDDLQIIPRVLQGLSGA--DLSTSIFGISLKTPVIEAPSAAHGLAHVKG 128 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 I+ + AA + +++ D + P L + + F Sbjct: 129 EIDTAIGTAAAGSLFSLSTYG-STDLRD--------VAAAVPGAPQFFQL-YMSKDDGFN 178 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA------------------------ 169 +AV G + L ++ + N Sbjct: 179 AYLVKKAVKA-GVKAIILTVDSTLGGYREEDVRNHFQFPLPMPNLAAYSSQDGVGKGIAE 237 Query: 170 --------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + S I + + +P+L+K + S D E +K+G ++ GG Sbjct: 238 IYAAAKADFVPSDIDKIKTLSGLPVLVKGIQ---SPEDAEAAIKAGADGIWVSNHGGRQL 294 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + + I V + G+R G + K++ GA Sbjct: 295 NGGPASITVLPSIASV-----------------VSRRVPIVFDSGVRRGSHVFKALASGA 337 Query: 282 SLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L L P + + ++ V + + + E + M L GTK ++ + L Sbjct: 338 DLVALGRPLIYGLNLGGAEGVKSVFDQINHELSIVMQLAGTKDIEAIKRTPLL 390 >gi|261192982|ref|XP_002622897.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis SLH14081] gi|239589032|gb|EEQ71675.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis SLH14081] Length = 495 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 118/355 (33%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + D + LG KL P+ + ++ + +A Sbjct: 145 NNTIYRSILLRPRVF--VDCTNCDLTTIALGHKLGLPIYVCPAA--MARLAHPVGEAGIA 200 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----LG 124 A K A + V + + + +++ R+ + + N + Sbjct: 201 AACSKFGAMQLISNNASMTPEEIVQNATPDQVFGWQIYVQTQRKKSEAMLARINKLKSIK 260 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPN-------GNTNFAD------ 170 V L D V + A + N L+E G FA Sbjct: 261 FVCLTLDAPVPAKREHDERTRAVAQATSVFNLLRESGGTPIEGGAGIGQQLFAGTDPSLT 320 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 S+ + L+ ++P++LK + + I ++ ++ GG S Sbjct: 321 WSTTLPWLAQHTNLPIVLKGIQTHEDAY-IASLHAPQVKAIILSNHGGRSMDTAP----- 374 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P +L R +C E + GG++ G D++K++ LGA G+ Sbjct: 375 -------------PAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGI 421 Query: 287 AS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 P + V +E L E +M LLG +V++L ++N + Q Sbjct: 422 GRAPLFGLGAGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 476 >gi|238487638|ref|XP_002375057.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220699936|gb|EED56275.1| L-lactate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 468 Score = 124 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 66/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +N K F L R L I V + LGK++S P+ +S++ G K+ Sbjct: 132 AEGEISKRQNFKAFQKVSLRPRILRSI--PTVVTTTTILGKQVSLPVYMSAV--GIAKLA 187 Query: 73 ERI-NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R LA AA K +A + +N I+S + +P + L V + Sbjct: 188 HPDGERALAAAAGKEGLAQVL-----ANGANNVIESVMDARTSPEQPIFQQL-YVNRDIT 241 Query: 132 FGVQKAHQAVHVLGADGLFLHLNP-------------LQEIIQPNGNTNFADL------- 171 +A GA +++ ++ LQ + + + + Sbjct: 242 KSEDVVRRA-ERAGASAIWITVDSPVVGKREMDERFNLQVEARDDPSRKGQGVAKTMANF 300 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + L +P+++K + C D G++ ++ GG S + Sbjct: 301 ISPFIDWDILLWLRGLTKLPIVIKGIQC---VEDAVQAYHYGVQGIVLSNHGGRSQDTAQ 357 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILG 280 + L+L R Y + Q GG+R G D+LK+I LG Sbjct: 358 AP------------------LLTLLEIRRYAPFLIESKMQIFIDGGIRRGTDVLKAIALG 399 Query: 281 ASLGGLASPFLK--PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL P L A V A+E LR+E +M LG ++EL Sbjct: 400 ATAVGLGRPTLYSLAAGYGEQGVRRAVEILRQEIESNMVFLGVTNLKEL 448 >gi|67537952|ref|XP_662750.1| hypothetical protein AN5146.2 [Aspergillus nidulans FGSC A4] gi|40743137|gb|EAA62327.1| hypothetical protein AN5146.2 [Aspergillus nidulans FGSC A4] gi|259484595|tpe|CBF80953.1| TPA: mitochondrial cytochrome b2, putative (AFU_orthologue; AFUA_1G07200) [Aspergillus nidulans FGSC A4] Length = 475 Score = 124 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 120/354 (33%), Gaps = 74/354 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + L R + S ++D S LG KL P+ +S +M GN I Sbjct: 139 NTDVYRAITLRPRVFIDCSKCDLDISC--LGYKLGIPIYVSPAAMARLGNPAGEAGI--- 193 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN---- 122 A A A Q V + + + ++L R+ + + N Sbjct: 194 -AEACRSFGAMQIISNNASMTPEQIVENAAPDQVFGWQLYVQTNRKKSEAQLARVNKLKA 252 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFAD------LSS 173 + V L D V + N Q G F Sbjct: 253 IKFVVLTLDAPVPGKREDDER---------GNAATGAGQGESGVGKQLFQGTDPTLTWRD 303 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESHRDLE 231 + L D+P++LK + + D + G + ++ GG + Sbjct: 304 TLPWLKKHTDLPIILKGLQ---THEDAYIASLHGPQVKGIILSNHGGRALDTAP------ 354 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLA 287 P +L R YC E + + GG+R G D++K++ LGA G+ Sbjct: 355 ------------PAVHTLLEIRKYCPEVFDKLEVLVDGGIRRGTDVVKALCLGAKAVGIG 402 Query: 288 SPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 P L A V ++ L E +M LLG +RV++L ++NT ++ Q Sbjct: 403 RPALWGLGAGGVAGVKRTLQILADETSTAMRLLGCERVEQLGPHHVNTRVVEQQ 456 >gi|167962794|dbj|BAG09373.1| peroxisomal glycolate oxidase [Glycine max] Length = 371 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++++ KM Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDITTTVLGFKISMPIMLAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQE----------------IIQ 161 + A+ L D + +A + FL L + + Sbjct: 145 ERAGFKAIALTVDTPILGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKADDSGLASYVS 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V L++ D + ++SG ++ G Sbjct: 205 GQIDRTLSW--KDVKWLQTITKLPILVKGV---LTAEDTRIAIQSGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T +LE + GG+R G D+ K++ LG Sbjct: 260 DYVPA------------------TISALEEVVKAAEGRLPVFLDGGVRRGTDVFKALALG 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AS + P + A + V + LR+EF ++M L G ++++ + + Sbjct: 302 ASGIFIGRPVVFSLAAEGEAGVRNVLRMLREEFELTMALSGCTSLKDITRDHIV 355 >gi|295101953|emb|CBK99498.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Faecalibacterium prausnitzii L2-6] Length = 340 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 107/330 (32%), Gaps = 67/330 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE------- 73 RN + D + L E D VE G+ +P + G + Sbjct: 47 RNYNKWADIRVNMDTLCENGT--PDTHVELFGRSFKYPFFAGPV--GAVNLHYSDTYTDM 102 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN--LGAVQ---- 127 N L A ++ +A G P + ++ +G Sbjct: 103 TYNDVLVRACAESGIAAFTGD-----------------GTNPDVMTMATKAIGNADGCGV 145 Query: 128 -LNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALL 178 + + + + A G F L L+ + P G+ + A+L A + Sbjct: 146 PTIKPWNIDTIKEKMAQAKASGCFAVAMDVDAAGLPFLKNMTPPAGSKSVAEL----AEI 201 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + P ++K V ++ ++G ++ GG + + ++ +I Sbjct: 202 VKLAERPFIVKGV---MTVKGALKAREAGAAAIVVSNHGGRVLDQCPATAEVLPEIAAAL 258 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + + + + GG+R GVD+ K++ LGA + PF+ Sbjct: 259 KG----------------TDVKVLVDGGIRTGVDVFKALALGADGVLICRPFVTAVYGGG 302 Query: 299 -DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V I+ L E +M + G + E+ Sbjct: 303 AEGVKCYIDKLAGELADTMQMCGAHSISEI 332 >gi|222636449|gb|EEE66581.1| hypothetical protein OsJ_23125 [Oryza sativa Japonica Group] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 118/354 (33%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I ++D + LG K+S P++I+ KM Sbjct: 30 AEDEWTLQENREAFARILFRPRIL--IDVSKIDMATTVLGFKISMPIMIAPSA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + S S + ++ R+ V + Sbjct: 86 HPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRA 145 Query: 122 N---LGAVQLNYDFGVQKAHQA-----------VHVLGADGLFLH-LNPLQE-----IIQ 161 A+ L D +A + + +GL L ++ + + Sbjct: 146 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVA 205 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V +++ D L +++G ++ G Sbjct: 206 GQIDRTLSW--KDVKWLQTITTLPILVKGV---ITAEDTRLAVENGAAGIIVSNHGARQL 260 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T +LE + + GG+R G D+ K++ LG Sbjct: 261 DYVP------------------STISALEEVVKAARGQLPVFLDGGVRRGTDVFKALALG 302 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ + P + A V ++ LR EF ++M L G + ++ N + Sbjct: 303 AAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDEFELTMALSGCTSLADITRNHVI 356 >gi|281491771|ref|YP_003353751.1| L-lactate oxidase [Lactococcus lactis subsp. lactis KF147] gi|281375485|gb|ADA64995.1| L-lactate oxidase [Lactococcus lactis subsp. lactis KF147] Length = 383 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 112/343 (32%), Gaps = 47/343 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNNKM 71 + ++ N F+ ++ R L + D S G KL P++ + + + + Sbjct: 63 DEWTLNENTSAFNKKQIMPRVLRGVDSA--DLSTSLFGIKLKTPIIQAPVAAQGLAHEEG 120 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRV----------------MFSDHNAIKSFELRQYAP 115 + +A ++ GS V S + F L++ Sbjct: 121 EVATAKAMAEVGSIFSISTY-GSTSVEDAAKAAPDAPQFFQLYMSKDDRFNEFLLKKAVS 179 Query: 116 HTVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 V L A + + + + + I + + Sbjct: 180 AGVKAIILTADSTLGGYREEDIVNHFQFPLPMPNLAAFSESDGTGKGISEIYAAAKQGLV 239 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + ++P+++K V S +D + + +G ++ GG + D+ Sbjct: 240 LEDIQKIKKITNLPVIVKGVQ---SPIDADDAINAGADGIWVSNHGGRQLDGGPASIDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +A+ + + G+R G + K++ GA + + P L Sbjct: 297 P-----------------LIAKSVNHRVPIVFDSGVRRGEHVFKALAQGADVVAVGRPVL 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + V + E L KE ++M L GTK ++E+ + + Sbjct: 340 YGLNLGGAKGVQSVFEHLNKELSITMQLAGTKNIEEIKHTSLI 382 >gi|116495791|ref|YP_807525.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus casei ATCC 334] gi|116105941|gb|ABJ71083.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus casei ATCC 334] Length = 371 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 115/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++H+AL I D D S FLG L P++++ + Sbjct: 46 DEWTLAENTKAFNHAQIVHKALSNI--DSPDLSTNFLGIDLKTPIMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + VA G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGVAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFAD--------- 170 +A G G+ L ++ + I PN A Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSAGDGKGKGIGE 212 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K V S D + +G ++ GG Sbjct: 213 IYASAAQKISEDDVRRIAEYTDLPVIVKGVQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ I G+R G K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKRVPIIFDSGVRRGSHAFKALAAGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ ++ V + E + E + M L GTK + ++ Sbjct: 313 DLVAFGRPVIYGLALGGAEGVQSVFEQIDHELEIIMQLAGTKTIADVKHAPL 364 >gi|261823606|ref|YP_003261712.1| L-lactate dehydrogenase [Pectobacterium wasabiae WPP163] gi|261607619|gb|ACX90105.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pectobacterium wasabiae WPP163] Length = 386 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 116/374 (31%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ G+KL+ P++++ + TG + Sbjct: 29 AYNEHTLRRNTADLADIALRQRILK--NMSDLSLETRLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAV-----------------------------GSQRVMFSD 101 E A AA + + + G R Sbjct: 87 RGEV---QAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALER 143 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG----ADGLFLHLNP-- 155 A L + A + + + A + L+ P Sbjct: 144 AQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPHWAWDVGLNGKPHD 203 Query: 156 ---LQEIIQ-PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 + P N+ ++ +A + P+++K + L D + Sbjct: 204 LGNVSAYRGTPTTLENYIGWLAENFDPSISWQDLAWIRELWKGPMIIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + Sbjct: 261 EAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVKGDIT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R G+D+++ I LGA L F+ A VV + + KE V+M L Sbjct: 303 ILADSGIRTGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + ++ ++ + Sbjct: 363 GAKSIADITADSLV 376 >gi|238483347|ref|XP_002372912.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] gi|220700962|gb|EED57300.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] Length = 496 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 112/323 (34%), Gaps = 59/323 (18%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRNLAIAAEKTKV------- 88 I E D S FLG KL P+ IS +M + + I A A K Sbjct: 156 IDCRECDLSTRFLGLKLGLPIYISPAAMARLAHPQGEAGI----AAACRKFGAMQLISHN 211 Query: 89 AMAVGSQRVMFSDHNAIKSFE------LRQYAPHTVLISNLGAVQ---LNYDF---GVQK 136 A Q V + + I ++ +++ I+++ ++ L D G ++ Sbjct: 212 ASMTTQQIVANAHPDQIFGWQLYCLKDVKRSEKRIAEINSIKEIKFICLTLDAPFPGKRE 271 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + L+P Q G + L +P++LK + + Sbjct: 272 IEERQKMEELRAAGAVLSP-----QVWGTDASLTWERTLNWLRMHTSLPIVLKGIQ---T 323 Query: 197 SMDIELGLKS--GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D L K +R ++ GG + + + + L R Sbjct: 324 YEDAILAAKHAPQVRGIVLSNHGGRALDTVSTPVHV------------------LLEIRR 365 Query: 255 YCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLR 309 +C E I GG++ G D++K++ LGA G+ L A V ++ L Sbjct: 366 FCPEVFDRLDVIVDGGIQRGTDVVKALALGAKAVGIGRAALYGLAAGGQSGVERTLQILA 425 Query: 310 KEFIVSMFLLGTKRVQELYLNTA 332 E +M LLG + V +L L Sbjct: 426 DETATAMRLLGVQHVDQLSLQHV 448 >gi|51244695|ref|YP_064579.1| hypothetical protein DP0843 [Desulfotalea psychrophila LSv54] gi|50875732|emb|CAG35572.1| hypothetical protein DP0843 [Desulfotalea psychrophila LSv54] Length = 353 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 105/327 (32%), Gaps = 40/327 (12%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + R L E D SV LG+K++ P+L + + G + M I+ Sbjct: 59 SFKSNFEALAEVKFNMRLLH--DVVEPDTSVTILGRKMALPVLAAPIGGISYNMGGAISE 116 Query: 78 NLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA-----PHTVLISNLGAVQLNY 130 + +G + + F + A P + + Sbjct: 117 KDYVRAIVNGCRAKSIIGCTGDGVPEVIHQEGFAAIKAADGEAIPFIKPWDDEELLAKLA 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + A GL ++ G A +K+A + + + +LK Sbjct: 177 GAKATGCLAIGMDIDAAGLI--------TLRLQGRPVSAKTPAKLAEIIKSTGMKFVLKG 228 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 V +++ + EL L++G ++ GG ++ +I Sbjct: 229 V---MTADEAELALEAGCEAIVVSDHGGRVLDHTPGTAEVLPEIAE-------------- 271 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 GG+R G D+LK + LGA + PF A+ V I+ L Sbjct: 272 ---RVKGRMTIFVDGGVRTGGDVLKMLALGADAVMIGRPFSVAAVGGLQAGVEKYIDQLS 328 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIRH 336 E +M L G ++ +IR Sbjct: 329 TELKQAMTLTG--TAAAASVSPNIIRR 353 >gi|50119080|ref|YP_048247.1| L-lactate dehydrogenase [Pectobacterium atrosepticum SCRI1043] gi|81827259|sp|Q6DAY3|LLDD_ERWCT RecName: Full=L-lactate dehydrogenase [cytochrome] gi|49609606|emb|CAG73039.1| L-lactate dehydrogenase [Pectobacterium atrosepticum SCRI1043] Length = 386 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 117/374 (31%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ + G+KL+ P++++ + TG + Sbjct: 29 AYGEHTLRRNTADLADIALRQRILK--NMSDLSLETQLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAV-----------------------------GSQRVMFSD 101 E A AA + + + G R Sbjct: 87 RGEV---QAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALER 143 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG----ADGLFLHLNP-- 155 A L + A + + + A + L+ P Sbjct: 144 AQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHD 203 Query: 156 ---LQEIIQ-PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 + P ++ + +A + P+++K + L D + Sbjct: 204 LGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + Sbjct: 261 EAVRFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIADAVKGDIT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ I LGA L F+ A VV + + KE V+M L Sbjct: 303 ILADSGIRSGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + ++ ++ + Sbjct: 363 GAKSIADITSDSLV 376 >gi|298249567|ref|ZP_06973371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ktedonobacter racemifer DSM 44963] gi|297547571|gb|EFH81438.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ktedonobacter racemifer DSM 44963] Length = 337 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 116/345 (33%), Gaps = 61/345 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ FD L R L + D S LG +S P+L++ Sbjct: 31 DEITLHANRAIFDHIRLRPRML--VDVTTCDTSTSVLGCPVSMPILVAPTA------QHG 82 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTVLISNLGAVQLNYDF 132 V Q +++ S L A L L V + + Sbjct: 83 FAHPEGECETARGVG-----QAGTLLTASSVSSRRLEDVAAAASGPLWFQL-YVFDDNNI 136 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------------------SS 173 + +A G + L ++ + + N L Sbjct: 137 TIDVVQRA-EQAGYKAIVLTVDVPRFGNRERDLRNAFHLPASANFDVPDVTKLKPSLTWR 195 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 +A L S +P+L+K V L++ D L L+ G ++ GG Sbjct: 196 DLAWLKSLTSLPILVKGV---LTAEDTILALEHGADGIVVSNHGGRQLDGA--------- 243 Query: 234 IGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I + +L E+ + GG+R G D++K++ LGA + P L Sbjct: 244 ---------ITSLEALPEVVEASSGRCEIYFDGGIRRGTDVIKTLALGAHAVLVGRPVLW 294 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A++ + V +E LR E ++M L G ++++ ALIR Sbjct: 295 GLAVNGQEGVRHVLELLRNELELAMALCGAPTLKQI--TPALIRR 337 >gi|163800168|ref|ZP_02194069.1| L-lactate dehydrogenase [Vibrio sp. AND4] gi|159175611|gb|EDP60405.1| L-lactate dehydrogenase [Vibrio sp. AND4] Length = 379 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 118/372 (31%), Gaps = 79/372 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN + D L R L E+ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTEDLGDVALRQRVL--RDMSELSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQA----------VHVLGADGLFLHLNPLQEII--------- 160 V D V A + LH + ++ Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQSMLHPSWALDVGVLGKPHDLG 205 Query: 161 -------QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +P ++ + + D P+++K + L D + Sbjct: 206 NISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAKDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + T +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGA------------------LSTAKALPSIADAVKGDLKIF 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+R G+D+++ + LGA L F+ A + V ++ KE V+M L G Sbjct: 305 ADSGIRTGLDVVRMLALGADCTLLGRSFVYALAAKGGEGVENLLDLYDKEMRVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 K + +L + + Sbjct: 365 KTIADLSQGSLV 376 >gi|289621825|emb|CBI51736.1| unnamed protein product [Sordaria macrospora] Length = 437 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 116/381 (30%), Gaps = 96/381 (25%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---NNKMIERINR 77 N + L R L V LG +S P+ ++ + G + + + I Sbjct: 64 SNSATYSLITLRPRIL--RDVSRVSIRTSILGSPVSSPIFAAATSLGITVHPEGEKEI-- 119 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH---------TVLISNLGAVQL 128 A ++ V M V S FS +R+ L L V Sbjct: 120 --GRACKRLGVGMTV-STSASFSVAEIAA--AVREAGVEGNDEEGGGEIPLWFQL-YVDK 173 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNP-------------LQEIIQ-------------- 161 + Q QA G +FL ++ E + Sbjct: 174 DRTKSEQLLTQACEAGGVKAVFLTVDAPVPGKREADERISASEAVGLLSGTGGVVVPMTG 233 Query: 162 --PNGNTNFADL-------------SSKIALLSSAMD----VPLLLKEVGCGLSSMDIEL 202 + L IA L + V ++LK V ++ D Sbjct: 234 EKAENDKFGGGLGRITGKFLDASVNWEDIAWLRRCLPRESGVKIVLKGVQ---TAADAVR 290 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA--- 259 +++G+ ++ GG S PT L L + C + Sbjct: 291 AMEAGVEGIVVSNHGGRSLDTAT------------------PTILVLLELQRCCPQVFER 332 Query: 260 -QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + + GG+ G D+ K++ LGAS G+ L + V +E L E +M + Sbjct: 333 MEVLIDGGVMRGTDVFKALCLGASGVGIGRGILYGLGYGEEGVRRYVEILNDELETTMKM 392 Query: 319 LGTKRVQELY---LNTALIRH 336 G + +++ LNT + H Sbjct: 393 CGITSLDQVHPGLLNTRAVDH 413 >gi|50550565|ref|XP_502755.1| YALI0D12661p [Yarrowia lipolytica] gi|49648623|emb|CAG80943.1| YALI0D12661p [Yarrowia lipolytica] Length = 382 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 66/373 (17%), Positives = 119/373 (31%), Gaps = 93/373 (24%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS-----MTGGNNKMIE 73 + N+ F+ + RA+ + ++ P VE G+K P+ ++ M + + Sbjct: 39 LAENQNAFNYLKIRARAMRGVGTIDISPKVELFGRKFRAPIGVAPSAYHQMADDSGECGT 98 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 A A + M + S FS+ E+R+ P L L V N Sbjct: 99 ------AAACQARNWPMGLSS----FSNKPLE---EVREAGPDAALFFQL-YVFKNKKTS 144 Query: 134 VQKAHQAVHVLGADGLFLHLNP---LQEIIQPNGN---------TNFAD----------- 170 +A G + L ++ N NF Sbjct: 145 ENLVKKA-EKAGFKAIALTVDTPYLGNRYADVRNNFKLPSHLSARNFEGTTDQPIDNAAE 203 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + I L S ++ + +K V +++ D + Sbjct: 204 ADSWARKIFNGEECPPDANVVDPDINWAETIPWLRSITNMQIWVKGV---VTAEDTHAAI 260 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 ++G+ ++ GG G+ T +L E+ Sbjct: 261 EAGVDGIWVSNHGGRQLDS------------------GLATIDALPEVVEAAAGRVPIHI 302 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLLGTK 322 GG+R G D+ K + LGA L P + A V +E + + + ++M L GTK Sbjct: 303 DGGIRRGGDVFKCLALGADFVWLGRPAIWGLKYDGQAGVELMEQIIEDDLKLTMALAGTK 362 Query: 323 RVQELYLNTALIR 335 V E+ + L+R Sbjct: 363 TVAEINRS-CLVR 374 >gi|227114496|ref|ZP_03828152.1| L-lactate dehydrogenase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 386 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 123/380 (32%), Gaps = 83/380 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ + G+KL+ P++++ + TG + Sbjct: 29 AYGEHTLRRNTADLADIALRQRILK--NMSDLSLETQLFGEKLAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAAAHKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNT 166 Q D A + G + L LQ + P NG Sbjct: 144 AQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRL--LQAVTHPQWAWDVGLNGKP 201 Query: 167 -----------------NFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMD 199 ++ + +A + P+++K + L D Sbjct: 202 HDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREMWKGPMIIKGI---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 + ++ G ++ GG + + T +L +A + Sbjct: 259 AKEAVRFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIADAVKGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 +A G+R G+D+++ I LGA L F+ A VV + + KE V+M Sbjct: 301 ITILADSGIRTGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTALIRHQ 337 L G K + ++ ++ + Q Sbjct: 361 LTGAKSIADITTDSLVQATQ 380 >gi|322695042|gb|EFY86857.1| mitochondrial cytochrome b2 [Metarhizium acridum CQMa 102] Length = 521 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 110/353 (31%), Gaps = 81/353 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + D L R + E D S LG K+ P ++ +M + I Sbjct: 141 NNSVYRDILLRPRMF--VDCTECDLSTALLGHKVGVPFFVAPAAMARLAHPDGEHGI--- 195 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA + A+ V S + ++ Q P + VQ D V Sbjct: 196 -AKAAARFN-ALQVISNNASMTPE------QIVQGCPSEQMFGWQIYVQNQRDKSVAMLK 247 Query: 139 QAVHV--------------------LGADGLFLHLNPLQEIIQPNGNTNFAD-------- 170 + + L F N +Q +G+ Sbjct: 248 RINAMKDRFKFVCLTLDAPVPGKRELDEKSNFERGNNVQAAATSSGDAQRPGGGGVGQQL 307 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGT 219 + + L+ D+P++LK + + D L + R ++ GG Sbjct: 308 FFGTACDLTWKTTLPWLAQHTDLPIVLKGIQ---THEDAYLAAQHAPRVKAIILSNHGGR 364 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILK 275 + P +L R YC E + GG++ G DI+K Sbjct: 365 AMDTAP------------------PAVHTLLEIRKYCPEVFSKIEVWVDGGIKRGTDIVK 406 Query: 276 SIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA GL L A V +E L E M LLG K++ EL Sbjct: 407 ALCLGAKAVGLGRAALFGLGAGGQAGVERTLEILEAETATCMRLLGVKKISEL 459 >gi|326406790|gb|ADZ63861.1| L-lactate oxidase [Lactococcus lactis subsp. lactis CV56] Length = 383 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 111/343 (32%), Gaps = 47/343 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNNKM 71 + ++ N F+ ++ R L I D S G KL P++ + + + + Sbjct: 63 DEWTLNENTSAFNKKQIMPRVLRGIDSA--DLSTSLFGIKLKTPIIQAPVAAQGLAHEEG 120 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRV----------------MFSDHNAIKSFELRQYAP 115 + +A ++ GS V S + F L++ Sbjct: 121 EVATAKAMAEVGSIFSISTY-GSTSVEDAAKAAPDAPQFFQLYMSKDDKFNEFLLKKAVS 179 Query: 116 HTVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 V L A + + + + I + + Sbjct: 180 AGVKAIILTADSTLGGYREEDIVNHFQFPFPMPNLAAFSESDGTGKGISEIYAAAKQGLV 239 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + ++P+++K V S +D + + +G ++ GG + D+ Sbjct: 240 LEDIQKIKKITNLPVIVKGVQ---SPIDADDAINAGADGIWVSNHGGRQLDGGPASIDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +A+ + + G+R G + K++ GA + + P L Sbjct: 297 P-----------------LIAKSVNHRVPIVFDSGVRRGEHVFKALAQGADVVAVGRPVL 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + V + E L KE ++M L GTK ++E+ + + Sbjct: 340 YGLNLGGAKGVQSVFEHLNKELSITMQLAGTKNIEEIKHTSLI 382 >gi|115470621|ref|NP_001058909.1| Os07g0152900 [Oryza sativa Japonica Group] gi|75325236|sp|Q6YT73|GLO5_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO5; AltName: Full=Glycolate oxidase 5; Short=GOX 5; Short=OsGLO5; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO5 gi|317376200|sp|B8B7C5|GLO5_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO5; AltName: Full=Glycolate oxidase 5; Short=GOX 5; Short=OsGLO5; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO5 gi|34395056|dbj|BAC84719.1| putative glycolate oxidase [Oryza sativa Japonica Group] gi|50508805|dbj|BAD31578.1| putative (S)-2-hydroxy-acid oxidase [Oryza sativa Japonica Group] gi|113610445|dbj|BAF20823.1| Os07g0152900 [Oryza sativa Japonica Group] gi|215678898|dbj|BAG96328.1| unnamed protein product [Oryza sativa Japonica Group] gi|215692798|dbj|BAG88242.1| unnamed protein product [Oryza sativa Japonica Group] gi|218199102|gb|EEC81529.1| hypothetical protein OsI_24928 [Oryza sativa Indica Group] Length = 369 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 119/354 (33%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I ++D + LG K+S P++I+ KM Sbjct: 30 AEDEWTLQENREAFARILFRPRIL--IDVSKIDMATTVLGFKISMPIMIAPSA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + S S + ++ R+ V + Sbjct: 86 HPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRA 145 Query: 122 N---LGAVQLNYDFGVQKAHQA-----------VHVLGADGLFLH-LNPLQE-----IIQ 161 A+ L D +A + + +GL L ++ + + Sbjct: 146 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVA 205 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V +++ D L +++G ++ G Sbjct: 206 GQIDRTLSW--KDVKWLQTITTLPILVKGV---ITAEDTRLAVENGAAGIIVSNHGARQL 260 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T +LE + + GG+R G D+ K++ LG Sbjct: 261 DYVPA------------------TISALEEVVKAARGQLPVFLDGGVRRGTDVFKALALG 302 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ + P + A V ++ LR EF ++M L G + ++ N + Sbjct: 303 AAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDEFELTMALSGCTSLADITRNHVI 356 >gi|291228831|ref|XP_002734381.1| PREDICTED: hydroxyacid oxidase 1-like [Saccoglossus kowalevskii] Length = 362 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 115/323 (35%), Gaps = 64/323 (19%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D LG ++ P+ IS T + A AA K M + S+ + Sbjct: 63 DLKTTVLGSEIDMPIAISP-TAFHGWAHPDAEGGTARAAANFKTCM-------ILSNIST 114 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN---------- 154 + E+ P V ++ V N +A G G+ + ++ Sbjct: 115 LSLEEICSIRPDGVKWMDI-YVWSNPRLTEDMILRA-ERAGCKGIVVTVDNCKVGNKRRL 172 Query: 155 ---PLQEIIQPNGNTNFADLSSK--------------------IALLSSAMDVPLLLKEV 191 + + + NF + I + S +P++LK + Sbjct: 173 ARVTGSGVGKDSTVANFMTYLERGIIKNLDEVSCTTPSATWTDIDWIKSITKLPIILKGI 232 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + ++ + ++ GG + + D+ + GI Sbjct: 233 ---MTVEDALIAVERKVDAIMVSNHGGRQLDSVPATIDVLA---------GIS------- 273 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRK 310 R ++ + GG+R G D+LK++ LGA + P + + S + V ++ L++ Sbjct: 274 -RAVGDKIEVYMDGGVRTGTDVLKALALGAKAVFIGRPIVFGLVHSGEQGVKNILQILKE 332 Query: 311 EFIVSMFLLGTKRVQELYLNTAL 333 EF ++M L G + ++++ + + Sbjct: 333 EFSLAMTLSGCRTIRDISRSLVI 355 >gi|255637766|gb|ACU19205.1| unknown [Glycine max] Length = 371 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 115/354 (32%), Gaps = 60/354 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++I+ KM Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDLTTTVLGFKISMPIMIAPTA--FQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQE----------------IIQ 161 + A+ L D + +A + FL L + + Sbjct: 145 ERAGFKAIALTVDTPILGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKADDSGLASYVS 204 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + L + +P+L+K V L++ D + ++SG ++ G Sbjct: 205 GQIDRTLSW--KDVKWLQTITKLPILVKGV---LTAEDTRIAIQSGAAGIIVSNHGARQL 259 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + T +LE + GG+R G D+ K++ L Sbjct: 260 DYVPA------------------TISALEEVVKAAEGRLPVFLDGGVRRGTDVFKALALD 301 Query: 281 ASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AS + P + A + V + LR+EF ++M L G ++++ + + Sbjct: 302 ASGIFIGRPVVFSLAAEGEAGVRNVLRMLREEFELTMALSGCTSLKDITRDHIV 355 >gi|269961788|ref|ZP_06176147.1| L-lactate dehydrogenase [Vibrio harveyi 1DA3] gi|269833499|gb|EEZ87599.1| L-lactate dehydrogenase [Vibrio harveyi 1DA3] Length = 379 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMSDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + Q + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--FQAMRHPSWALDVGVLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTAKALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 IFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + +L ++ + Sbjct: 363 GAKTISDLSRDSLV 376 >gi|46109298|ref|XP_381707.1| hypothetical protein FG01531.1 [Gibberella zeae PH-1] Length = 383 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 109/334 (32%), Gaps = 37/334 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F + R + +I+ E LG S P IS G N Sbjct: 72 AAGEWSYRNNLEVFQRYRFKPRTMVDITNVENTLPTTILGHNFSAPFFISPCAKGGNAHP 131 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + +N A + + + A E + L SN D Sbjct: 132 DA-EKNFVKGAAAGDILYMPALYASLTIEEIAKAKAEGQVVFQQLYLSSN--------DT 182 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIALLSSAMD 183 Q+ GA + ++ + + L Sbjct: 183 ETQELLDRSEKAGAAAIIFTVDSAADGNRHRAARFGVGSADSDYSYITWDYYKKLQKMTK 242 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++K +G S+ D +L ++ G ++ GG S ++ +I Sbjct: 243 LPVVIKGIG---SAADAKLAVQHGAPAIILSNHGGRQLDGSPSGLEVALEIH-------- 291 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 E A + + A GG+R G D+LK + LG GL PF+ + D V Sbjct: 292 ------EEAPEVFKKIEVYADGGVRYGADVLKLLSLGVKAVGLGRPFMYANVFGVDGVKK 345 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 I+ L+ E + LG +Q +N + ++ + Sbjct: 346 VIDILKHEIAIDAGNLGVPDIQ--KINPSYVKWK 377 >gi|255320376|ref|ZP_05361560.1| L-lactate dehydrogenase [Acinetobacter radioresistens SK82] gi|262379342|ref|ZP_06072498.1| L-lactate oxidase [Acinetobacter radioresistens SH164] gi|255302571|gb|EET81804.1| L-lactate dehydrogenase [Acinetobacter radioresistens SK82] gi|262298799|gb|EEY86712.1| L-lactate oxidase [Acinetobacter radioresistens SH164] Length = 381 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 126/377 (33%), Gaps = 80/377 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L E+ + + LS P+ ++ + TG + Sbjct: 29 AYAEYTLQRNVEDLSKIALRQRVL--NDMSELSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLI 120 E A+AAEK + + + + + LR + + + Sbjct: 87 RGEV---QAAVAAEKNGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMKNVLER 143 Query: 121 SNL---------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 + GA + G+ + A+ + H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDVHSGMSGPNAAMRRYMQSFMHPHWAWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGANFDPSISWKDLEWIREYWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTTRALPAIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 + G+RNG+D+++ I LGA L L F+ + V +E + KE V+M L Sbjct: 303 IMVDSGVRNGLDVVRMIALGADLCLLGRAFVYALGAAGGEGVNHLLELINKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIRH 336 G K +Q++ + L++ Sbjct: 363 GAKTIQDI-SSECLVKR 378 >gi|169826497|ref|YP_001696655.1| hydroxyacid oxidase 1 [Lysinibacillus sphaericus C3-41] gi|168990985|gb|ACA38525.1| Hydroxyacid oxidase 1 [Lysinibacillus sphaericus C3-41] Length = 386 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 112/357 (31%), Gaps = 67/357 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + + N+ F+ + ++ R L V S+ GK PLL + M G ++ E Sbjct: 50 EQTLRNNRSAFEKYSIVPRFL--NDVSNVHTSINLFGKTYPTPLLFAPVGMNGMVHEEGE 107 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFELRQYAPHTVLISNLGAVQ 127 AA++ + + D +A K F+L + Sbjct: 108 L---AAVRAAQQLNMPYIQSTVSTYALEDVAEAAPSATKWFQLYWSTNEEIAF---SMAA 161 Query: 128 LNYDFGVQKAHQAVHVL---------------------------GADGLF-LHLNPLQEI 159 G + V + + L + + Sbjct: 162 RAESAGFEAIVLTVDTVMLGWREEDVRNQFSPLKLGYAKGNYINDPVFMASLPNDSFESY 221 Query: 160 IQPNGNTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 +Q F + L ++P+LLK + L D +L + +G+ ++ G Sbjct: 222 VQGVLQNVFHPTLNWEHVRELKRRTNLPILLKGI---LHPEDAKLAIVNGVDGIIVSNHG 278 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D I + I G+ G+D LK++ Sbjct: 279 GRQLDGVIGSLDALPSI-----------------VSAVKGQIPIILDSGVYRGMDALKAL 321 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + PF+ A++ V + ++ E VS+ L GT ++ L T + Sbjct: 322 ALGADAVAIGRPFIYGLALEGQQGVERVMTNIYDELKVSIALAGTTSIEGLRTITLV 378 >gi|153831711|ref|ZP_01984378.1| L-lactate dehydrogenase (cytochrome) [Vibrio harveyi HY01] gi|148872221|gb|EDL71038.1| L-lactate dehydrogenase (cytochrome) [Vibrio harveyi HY01] Length = 379 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 117/372 (31%), Gaps = 79/372 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMSDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQA----------VHVLGADGLFLHLNPLQEII--------- 160 V D V A + LH + ++ Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQSMLHPSWALDVGVLGKPHDLG 205 Query: 161 -------QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +P ++ + + D P+++K + L D + Sbjct: 206 NISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAKDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + T +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGV------------------LSTAKALPSIADAVKGDLKIF 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G Sbjct: 305 VDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 K + +L ++ + Sbjct: 365 KTISDLSRDSLV 376 >gi|52548679|gb|AAU82528.1| conserved hypothetical protein [uncultured archaeon GZfos18C8] Length = 109 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 2/101 (1%) Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +F DWGIPT S+ IA+GG+R G+DI KSI LGASL G A P + PAM Sbjct: 1 MFWDWGIPTAASVVEC--VSCGLPVIATGGVRTGIDIAKSIALGASLSGTALPLVAPAMK 58 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++DAV+ + S+ E ++MFL G + V +L +I + Sbjct: 59 NADAVIDRLSSMISELEIAMFLCGCRDVADLKTAPVVIGGR 99 >gi|167961875|dbj|BAG09382.1| peroxisomal glycolate oxidase [Glycine max] Length = 371 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 117/355 (32%), Gaps = 62/355 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D + LG K+S P++++ KM Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDITTTVLGFKISMPIMLAPTA--MQKMA 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L Y V+ Sbjct: 85 HPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRA 144 Query: 120 -ISNLGAVQLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEI----------------I 160 + A+ L D + + + L FL L + + + Sbjct: 145 ERAGFKAIALTVDTP-RLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKADDSGLASYV 203 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L + +P+L+K V L++ D + ++SG ++ G Sbjct: 204 AGQIDRTLSW--KDVKWLQTITKLPILVKGV---LTAEDTRIAVQSGAAGIIVSNHGARQ 258 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T +LE + GG+R G D+ K++ L Sbjct: 259 LDYVPA------------------TISALEEVVKAAEGRVPVFLDGGVRRGTDVFKALAL 300 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GAS + P + A + V + LR+EF ++M L G ++++ + + Sbjct: 301 GASGIFIGRPVVFSLAAEGEAGVRNVLRMLREEFELTMALSGCTSLKDITRDHIV 355 >gi|212536606|ref|XP_002148459.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210070858|gb|EEA24948.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 488 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 106/348 (30%), Gaps = 63/348 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N+ +D R L + + G K S P ++ K+ Sbjct: 139 ATDLVSERANQSLWDRIWFRPRVL--RNVRNAVTERKIHGVKTSVPFYVAPAA--MAKLA 194 Query: 73 ERINRNLAIAAEKTK---VAMAVGSQRVMFSD---------HNAIKSFELRQYAPHTVLI 120 + LAIA V + D + + + A ++ Sbjct: 195 HD-DGELAIARACAGNGVVQQICINASYQLEDIINAAPPGTPFLFQLYANKNRAATEAIL 253 Query: 121 SNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---- 171 + A + L D V +A + + + Q + + L Sbjct: 254 KRVWATGIHVLFLTVDAPVPGKREADEKVKTSAM---IKTPMTGTQSANDHRGSGLTRIM 310 Query: 172 ---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + L + ++LK V S D + +++G+ ++ GG + Sbjct: 311 GTYIDDQLNWDDLQWLRTIWKGKIVLKGVQ---SVEDAMMAVEAGVDGITLSNHGGRNLD 367 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P + L R + E Q GG+R G DILK++ Sbjct: 368 TSP------------------PGLMVLLELRKFYPEVFEKIQVHLDGGIRRGTDILKALC 409 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA+ L PFL + V I+ L+ E +M L+G + + Sbjct: 410 LGATSVSLGRPFLYSVLYGEQGVQHLIQILKDELETAMRLVGITDLSQ 457 >gi|226943364|ref|YP_002798437.1| L-lactate dehydrogenase/FMN-dependent alpha-hydroxy acid dehydrogenase [Azotobacter vinelandii DJ] gi|226718291|gb|ACO77462.1| L-lactate dehydrogenase/FMN-dependent alpha-hydroxy acid dehydrogenase [Azotobacter vinelandii DJ] Length = 371 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 122/356 (34%), Gaps = 76/356 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F L RALP + +E G++ P+L++ + + + Sbjct: 41 AADELTLRDNCAAFQRLRLRSRALP--DLTDGHTRLELFGQRFEQPILLAPVA---YQKL 95 Query: 73 ERINRNLAI--AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA AA + M V +Q + + A ++ T L L VQ + Sbjct: 96 VHPDGELATVLAASAARAGMVVSTQASVALEDIARQA--------QTPLWFQL-YVQPDR 146 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQ-----------------EIIQPNGNTNFADLS 172 F + +A G L + ++ P+ E + G Sbjct: 147 AFTRELVQRA-EAAGYQALVVTVDAPVSGLRNREQRAGFALPEGVEAVNLRGMRALPPTI 205 Query: 173 SKI--------------------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 ++I A L S +PLL+K V + D L GI Sbjct: 206 ARIGDSPLFGGPLLAAAPTWRELAWLRSLTRLPLLVKGV---MHPEDARRALAEGIDGII 262 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + + ++ +I V + GG+R G D Sbjct: 263 VSNHGGRTLDTQPATIEVLEEIAGV-----------------VEGRLPLLLDGGIRRGTD 305 Query: 273 ILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +LK++ LGAS + A + V A++ LR E V+M L G + + ++ Sbjct: 306 VLKALALGASAVLVGRSYVFALAAAGAPGVCHALQLLRAELEVAMALTGCRTLADI 361 >gi|332702598|ref|ZP_08422686.1| (S)-2-hydroxy-acid oxidase [Desulfovibrio africanus str. Walvis Bay] gi|332552747|gb|EGJ49791.1| (S)-2-hydroxy-acid oxidase [Desulfovibrio africanus str. Walvis Bay] Length = 338 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 102/313 (32%), Gaps = 30/313 (9%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + D R L D SV LGK+L+ P+L + + G + M + + Sbjct: 44 SFRANVQALADVRFDMRLLH--DAATPDLSVTVLGKELALPVLAAPIGGVSFNMGGKRSE 101 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 +AA G+ + + SF + + + + Sbjct: 102 EEYVAAVLHG-CRVRGTLGCS---GDGVPSFIIEAGLKALRELGGEAIPFIKPWEDAELY 157 Query: 138 HQAVHVLGADGLFLHLNPLQE---IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + A ++ + G S+K+ + + +LK + Sbjct: 158 EKLGKAAEAGARIAGIDVDAAGLVTLAKMGRPVGPKSSAKLRDIIDRFPMQFILKGI--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ + +G ++ GG D+ + Sbjct: 215 MTPDEARKARDAGAAGIVVSNHGGRVLDFTPGVADVLPKVAA-----------------A 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFI 313 E +A GG+RNGVD+LK + LGA + PF A+ D V A ++ L E Sbjct: 258 VKGEMVVLADGGVRNGVDVLKMLALGADAVLIGRPFAVAAVGGLQDGVTAYLDQLAGELR 317 Query: 314 VSMFLLGTKRVQE 326 +M L GT + + Sbjct: 318 SAMVLTGTAKASQ 330 >gi|256829752|ref|YP_003158480.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfomicrobium baculatum DSM 4028] gi|256578928|gb|ACU90064.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfomicrobium baculatum DSM 4028] Length = 338 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 107/311 (34%), Gaps = 34/311 (10%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + R + EI E D S LG LS P++ + + G + M + Sbjct: 45 SNVQALAKVTFNMRLVHEI--TEPDTSTSILGLDLSMPVMAAPIGGVSFNMGGKRTEEEY 102 Query: 81 IAA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 I A + + G F + + + H + Y+ + Sbjct: 103 IKAIIDGSRQAGIIGCTGDGVPPFIHESGLA--AIATAGGHGIPFIKPWEDAELYEKLAK 160 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 ++G D L L+++ G + + + V ++K V + Sbjct: 161 ARDCGAKIIGMDIDAAGLITLRKM----GRPVSPKSVDTLREIIAKAGVKFIIKGV---M 213 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + D L L++G ++ GG ++ GI A Sbjct: 214 TPEDASLALQAGADAIVVSNHGGRVLDHTPGTAEVLP---------GI--------AGQM 256 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIV 314 + I GG+R G D+LK + LGA + PF AM + ++ V +LR E + Sbjct: 257 KGKLGIIVDGGVRTGADVLKMLALGADAIMVGRPFSIAAMGNLTEGVATYSATLRTELMQ 316 Query: 315 SMFLLGTKRVQ 325 +M + GT+ + Sbjct: 317 AMVMTGTESIA 327 >gi|172036632|ref|YP_001803133.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cyanothece sp. ATCC 51142] gi|171698086|gb|ACB51067.1| probable FMN-dependent alpha-hydroxy acid dehydrogenase [Cyanothece sp. ATCC 51142] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 129/358 (36%), Gaps = 63/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------G 66 + + N+K F+++ L + L + +++ S + LG+ LS P+ ++ M Sbjct: 39 ALDEITLKNNRKSFNNYQLYPKVL--VDVSQINLSTKLLGQTLSMPIGVAPMAFQCLAHP 96 Query: 67 GNNKMIERI--------------NRNLAIAAE---------KTKVAMAVGSQRVMFSDHN 103 K ++ +L A + + G + + Sbjct: 97 HGEKATAKVLSDLKSLLILSTLSTTSLEEVAACQENNLRWFQLYIHKDKGLTKALVERAE 156 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ----EI 159 + ++ + + F + + + +++ L + + Q Sbjct: 157 KAG-YTAICVTVDAPMLGK-REIDIKNQFTLPEPLKLANLVTLKDLDIPNSSNQSGLFAY 214 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 Q + + + L S +P++LK + L + D L +++G++ ++ GG Sbjct: 215 FQQQIDPSLTW--KDLEWLQSITKLPIVLKGI---LRADDARLAVENGVKSIIVSNHGGR 269 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSII 278 I T +L ++ N+ I GG+R G D+ K++ Sbjct: 270 QLDGA------------------ITTLEALPKIVEAVGNDIDIIMDGGIRRGTDVFKALA 311 Query: 279 LGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LGA + P L ++ V +E L+ E +++M L G V E+ ++ LI+ Sbjct: 312 LGAKAVLIGRPILWGLTVNGEAGVNHVLELLKDELLLAMALSGCPSVTEI-NDSFLIK 368 >gi|310790967|gb|EFQ26500.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 495 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 113/355 (31%), Gaps = 80/355 (22%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINR 77 N K + L R + +VD S LG + PL ++ +M + E R Sbjct: 141 SNNNKAYRQILLRPRVF--VDCTKVDTSTNLLGHHVGIPLFVAPAAMARLAHPDGE---R 195 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 +A AA K V S++ ++ ++ + +P + VQ + Sbjct: 196 GIARAAAKFNAMQCV-------SNNASMTPEQIIEGSPEGQVFGWQLYVQNDRAKSEAML 248 Query: 138 HQAVHVLG-ADGLFLHLNP-------------LQEIIQPNGNTNFAD------------- 170 + + + L L+ + + +N Sbjct: 249 KRINAMKDRYKYITLTLDAPWPGKRELDEKQQFEGAFEVESESNSKSDEAKRPGGGGVGQ 308 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRG 217 + + L+ D+P++LK + + D L + + ++ G Sbjct: 309 QLFFGTAADLTWKTTLPWLAQHTDLPIVLKGLQ---THEDAYLAARYAPQVKAIILSNHG 365 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDI 273 G + P +L R YC E + GG++ G DI Sbjct: 366 GRALDTAP------------------PAVHTLLEIRKYCPEVFDKIEVWVDGGIKRGTDI 407 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +K++ LGA G+ L A V E L+ E M LLG K V +L Sbjct: 408 VKALCLGAKAVGIGRAALFGLGAGGQAGVERTYEILKGEMETCMRLLGAKSVSDL 462 >gi|189426589|ref|YP_001953766.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geobacter lovleyi SZ] gi|189422848|gb|ACD97246.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geobacter lovleyi SZ] Length = 407 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 42/316 (13%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---------NNKMI 72 N + L R EI + D S+ G KLS P+L S +TGG Sbjct: 114 NLAALAKYELNMRTFHEI--KKPDTSLTLFGVKLSMPIL-SGITGGVTYNMGLQGKVSEE 170 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E I +A + + A D ++ L+ A + + G ++ Sbjct: 171 EYIEGIIAGCIQAGTIGFAAD----GIGDPLSVYQTRLQTVAKYRGKAA--GQIKPRTQA 224 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEII--QPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + + + GA + ++ P + ++ L++A +P ++K Sbjct: 225 EIIERIRLLEAAGAPFFAIDIDSAGRASRALPGKTVEPKN-LKQLRELANATKMPFIIKG 283 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ + + + G ++ GG + + I Sbjct: 284 I---MTVDEAKQAVDVGAAGIVVSNHGGRVMDHTPGTAQVLAAIAD-------------- 326 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLR 309 + +A GG+R G D+LK + LGA + P ++ ++ + V ++ ++ Sbjct: 327 ---KVKGDIVILADGGVRYGADVLKMLALGADAVLVGRPLVRGSVGGGPEGVALMLKKMQ 383 Query: 310 KEFIVSMFLLGTKRVQ 325 E +V+M L GT V+ Sbjct: 384 GELVVAMTLTGTADVK 399 >gi|326527219|dbj|BAK04551.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 370 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 112/367 (30%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I +D + LG K+S P++IS KM Sbjct: 31 AEDEWTLKENREAFSRILFRPRIL--IDVSTIDMTTSVLGMKMSMPIMISPTA--FQKMA 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E S ++ + + + A + QL Sbjct: 87 HP---------EGEYATARAASAAGTVMTLSSWATSSVEEVASTGP---GIRFFQLYVYK 134 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPL----------QEIIQPNGNT--NFADL------ 171 + Q V G + L ++ + P G T NF L Sbjct: 135 NRKVVAQLVKRAEKAGFKAIALTVDTPRLGRREADIKNRFVLPPGLTLKNFEGLDLGTMD 194 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + L S +P+L+K V +++ D L + SG Sbjct: 195 QANDSGLASYVAGQIDRTLSWKDVKWLQSITTMPILVKGV---ITAEDARLAVHSGAAGI 251 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNG 270 ++ G + + T +LE GG+R G Sbjct: 252 IVSNHGARQLDYVPA------------------TISALEEVVTAAQGRIPVYLDGGVRRG 293 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+ K++ LGAS + P + A + V + +R+EF ++M L G ++ ++ Sbjct: 294 TDVFKALALGASGVFIGRPVVFALAAEGEAGVRNVLRMMREEFELTMALGGCTKLSDITR 353 Query: 330 NTALIRH 336 Sbjct: 354 EHIFTEG 360 >gi|15673234|ref|NP_267408.1| L-lactate oxidase [Lactococcus lactis subsp. lactis Il1403] gi|12724225|gb|AAK05350.1|AE006357_5 L-lactate oxidase [Lactococcus lactis subsp. lactis Il1403] Length = 383 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 113/342 (33%), Gaps = 45/342 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + ++ N F+ ++ R L I D S G KL P++ + + G Sbjct: 63 DEWTLNENTSAFNKKQIMPRVLRGIDSA--DLSTSLFGIKLKTPIIQAPVAAQGLAHAEG 120 Query: 74 RINRNLAIAAEKTKVAMAV-GSQRV----------------MFSDHNAIKSFELRQYAPH 116 + A+A + +++ GS V S + F L++ Sbjct: 121 EVATAKAMAEVGSIFSISTYGSTSVEDAAKAAPDAPQFFQLYMSKDDKFNEFLLKKAVSA 180 Query: 117 TVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 V L A + + + + I + + Sbjct: 181 GVKAIILTADSTLGGYREEDIVNHFQFPFPMPNLAAFSESDGTGKGISEIYAAAKQGLVL 240 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I + ++P+++K V S +D + + +G ++ GG + D+ Sbjct: 241 EDIQKIKKITNLPVIVKGVQ---SPIDADDAINAGADGIWVSNHGGRQLDGGPASIDVLP 297 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +A+ + + G+R G + K++ GA + + P L Sbjct: 298 -----------------LIAKSVNHRVPIVFDSGVRRGEHVFKALAQGADVVAVGRPVLY 340 Query: 293 PA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + V + E L KE ++M L GTK ++E+ + + Sbjct: 341 GLNLGGAKGVQSVFEHLNKELSITMQLAGTKNIEEIKHTSLI 382 >gi|332671489|ref|YP_004454497.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cellulomonas fimi ATCC 484] gi|332340527|gb|AEE47110.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cellulomonas fimi ATCC 484] Length = 403 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 114/360 (31%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R + F + L +D + LGK S P + TG M Sbjct: 59 AEGEISLRRARSLFRNLEFRPSILH--DVSGIDTTTTMLGKPSSVPFSFAP-TGFTRMMH 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSD------HNAIKSFEL-----RQYAPHTVLIS 121 R + AE+ + A+ + + +A K F+L R + + Sbjct: 116 HEGERAVVRVAERRGIPYALSTMGTTSIEEVAKAAPDARKWFQLYVWKDRSAGEDLMARA 175 Query: 122 N---LGAVQLNYDFGVQKAH----------------QAVHVLGADGL----FLHLNPLQE 158 A+QL D V A + V G L PL+ Sbjct: 176 KAAGFEALQLTVDVPVAGARLRDARNGFSIPPALTVKTVLDAGMHPAWWINLLTTEPLKF 235 Query: 159 IIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + A+L K+ L ++ D PL++K + + D + +G Sbjct: 236 ASLSTWDGTVAELLDKLFDPSMTIADLEWLRASWDGPLIIKGIQ---TVDDARRVVDAGA 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L D+ A+ G+ Sbjct: 293 DAIVLSNHGGRQLDRAPVPVRLLPDVAE-----------------AIDGRAEVWVDTGIM 335 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G D++ ++ LGA + +L M + V A E L +E +M LLG V EL Sbjct: 336 SGADVVAALALGADATMVGRAYLYGLMAGGERGVDRAAEILSREVRRTMALLGVSSVSEL 395 >gi|24528004|emb|CAD33731.1| putative FMN-dependent dehydrogenase [Escherichia coli] Length = 405 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 122/352 (34%), Gaps = 59/352 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 82 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 140 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 141 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 196 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 197 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 251 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 252 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 308 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 309 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 351 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L A V + IE L+ E +M L G + +++L + IR++ Sbjct: 352 GRPVLYGIAAGGVGGVASVIEHLKTELRTAMLLSGARTLKDL--SQGFIRNK 401 >gi|323507643|emb|CBQ67514.1| related to L-lactate dehydrogenase (cytochrome b2) [Sporisorium reilianum] Length = 586 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 127/346 (36%), Gaps = 53/346 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-----GKKLSFPLLIS--SMT 65 + +N+ F+ R L I +VD SV+ + G + P+ +S +M Sbjct: 237 ADDEITKAQNRASFNRIVFRPRILRAIG--QVDSSVKLIDSHGTGVDCALPIYVSPAAMA 294 Query: 66 -GGNNKMIERINRNLAIAAEKTKV---AMAVGSQRVMFSDHNAIKSFEL----RQYAPHT 117 G+ + R AA + A + + + ++L + A Sbjct: 295 KLGHPDGELNLTRGAGKAAIIQGISANASVGLDEMLDARQKDQPVIYQLYVNKDRAASER 354 Query: 118 VLISN----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG--------- 164 +L + AV L D V + + D + + ++ +++ G Sbjct: 355 ILRKVEARGVSAVMLTVDAPVMGKRERDRRVKGDEVEMGVDHGKDVKAQGGGVAQAISGY 414 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + N IA + +PL LK + + D+EL + G+ ++ GG S Sbjct: 415 IDPNLTW--DDIAWFRNTCKLPLYLKGIQ---TVEDVELAAQHGVEGVVLSNHGGRSLEY 469 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGAS 282 + D+ + L RP ++ + GG+R G D+LK++ LGA Sbjct: 470 SPAPLDVLVE---------------LRQRRPDLFDKVEVFLDGGVRRGTDVLKAVALGAK 514 Query: 283 LGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL PFL +A V AI L+ E M LLG + +L Sbjct: 515 AVGLGRPFLYAQSGYGEAGVTRAIHILQDEIHRGMQLLGVTSLDQL 560 >gi|160942599|ref|ZP_02089844.1| hypothetical protein FAEPRAM212_00073 [Faecalibacterium prausnitzii M21/2] gi|158446078|gb|EDP23081.1| hypothetical protein FAEPRAM212_00073 [Faecalibacterium prausnitzii M21/2] Length = 339 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 108/324 (33%), Gaps = 55/324 (16%) Query: 21 RNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE------ 73 RN + D + L P D ++E GK +P + G + Sbjct: 47 RNYNKWADIRVNMDTLCPG---GAPDTTLELFGKSFRYPFFAGPV--GAVNLHYSDTYTD 101 Query: 74 -RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 N L A + +A G ++ + + A + + V + Sbjct: 102 MTYNDVLVRACAENGIAAFTGDG----TNP------TVMEMATRAIGAAGGCGVPTIKPW 151 Query: 133 GVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + + + A G F L L+ + P G+ + ++A + + Sbjct: 152 NIDTIREKMAQAKASGCFAMAMDVDAAGLPFLKNMTPPAGSKS----VEELAEIVQLAER 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K V ++ ++G ++ GG + + ++ +I + G Sbjct: 208 PFIVKGV---MTVKGALKAKQAGAAAIVVSNHGGRVLDQCPATAEVLPEIAAALKGTG-- 262 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + + GG+R GVD+ K++ LGA + PF+ + V Sbjct: 263 --------------VKVLVDGGIRTGVDVFKALALGADGVLICRPFVTAVYGGGAEGVKC 308 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 I+ L E +M + G + E+ Sbjct: 309 YIDKLAGELADTMQMCGAHTLAEI 332 >gi|227508134|ref|ZP_03938183.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192363|gb|EEI72430.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 119/352 (33%), Gaps = 58/352 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-LLISSMTGGNNKMIE 73 + + N++ F ++ RAL + ++ + G L P ++ + G Sbjct: 46 DEWTLRENRRAFTHKQIVPRAL--TNIEKPELETNVFGIPLKTPLFMVPAAAQGLAHAKG 103 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-------NLGAV 126 ++ +AA +A + S + + AP + N + Sbjct: 104 EVDTAKGVAAVGGLMAQSTYSSTSI------ADTAASGNGAPQFFQLYMSKDWDFNEALL 157 Query: 127 QLNYDFGVQKAHQAVHVL-----GADGL---FLHLNPLQEIIQPNGNTNFADLS------ 172 GV+ V AD + + G+ ++ Sbjct: 158 DEAKRAGVKGIILTVDATVDGYREADIINNFQFPIPMANLTKYSEGDGQGKGIAEIYASA 217 Query: 173 ------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A +++ D+P+++K + S D + +G ++ GG + + Sbjct: 218 AQKIGPDDVARIANYTDLPVIVKGIE---SPEDALYAIGAGASGIYVSNHGGRQLNGGPA 274 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D+ D+ A+ + I G+R G D+ K++ GA L G+ Sbjct: 275 SFDVLEDV-----------------AKAVNGKVPVIFDSGVRRGSDVFKALASGADLVGI 317 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL-IRH 336 P + A+ + V + E L E + M L GTK + ++ L IR+ Sbjct: 318 GRPVIYGLALGGAQGVQSVFEHLDHELEIIMQLAGTKTISDVKNAKLLNIRY 369 >gi|296420707|ref|XP_002839910.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636117|emb|CAZ84101.1| unnamed protein product [Tuber melanosporum] Length = 524 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 106/337 (31%), Gaps = 48/337 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-L 79 N + L R VD ++FP+ ++ ++ + Sbjct: 176 HNNTAYQQILLRPRIFK--DVRNVDTRTTMCSSSVAFPVFVAPAA--MARLAHPSGEAGI 231 Query: 80 AIAAEKTKVAMAVGSQ-----------RVMFSDHNAIKSFELRQYAPHTVLISNLG---- 124 A A + V V + RV + + + L+ +G Sbjct: 232 AEACGREGVLQCVSTNASLKPEQVMAGRVSDKQPSWFQLYVQEDRRKSEALLKRVGTLGF 291 Query: 125 -AVQLNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--FADL-----SS 173 AV L D G ++A + G +Q + G FA Sbjct: 292 TAVVLTLDAPTPGKREADERAKNAGNITSATFGESMQGKSESGGLGKALFAGTTPSLTWE 351 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +P++LK + + L+ G+ ++ GG + + Sbjct: 352 DLEWLRKHTRLPIILKGLQTHEDAAMAARKEVLELGVTGIILSNHGGRAADTAPPPVYVL 411 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I A ++ + GG+R G D++K++ LGA G+ P L Sbjct: 412 MEIRKY--------------APEVFDKLEVYVDGGIRRGTDVVKALCLGAKAVGIGRPAL 457 Query: 292 KPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V + LR+E +M LLG V EL Sbjct: 458 FGLSGYGVDGVRRVLAILREEIETTMRLLGVYSVGEL 494 >gi|307543809|ref|YP_003896288.1| L-lactate dehydrogenase [Halomonas elongata DSM 2581] gi|307215833|emb|CBV41103.1| L-lactate dehydrogenase (cytochrome) [Halomonas elongata DSM 2581] Length = 384 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 123/374 (32%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + D L R L + E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVEDLADIALRQRVL--RDMSTLSLETELFGESLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A AA + + + V D A F+L R + H + Sbjct: 87 RGEV---QAARAAASKGIPFTLSTVSVCPIDEVASAVDRPLWFQLYVLKDRGFMRHVLER 143 Query: 121 SN---LGAVQLNYDFGVQKAHQ-------------AVHVLGADG-------LFLHLNP-- 155 + + + D V A +L A + +H P Sbjct: 144 AREAGIKTLVFTVDMPVPGARYRDAHSGMSGRHAAIRRMLQAVTHPSWAWDVGVHGRPHD 203 Query: 156 ---LQEII-QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + QP ++ + + D P+++K + L D Sbjct: 204 LGNVSDYRGQPTELEDYIAWLGDNFDPSISWKDLEWIREFWDGPMIIKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + T +L +A ++ Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGVP------------------STARALPAIADAVKDDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ I +GA L F+ A V +E KE V+M L Sbjct: 303 ILADSGVRSGLDVVRMIAMGADTVLLGRAFVYALATAGEAGVAHLLELFEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G + + +L +++ + Sbjct: 363 GARSISDLGIDSLV 376 >gi|315445046|ref|YP_004077925.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Mycobacterium sp. Spyr1] gi|315263349|gb|ADU00091.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Mycobacterium sp. Spyr1] Length = 386 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 119/367 (32%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 + N+ FD W L+ R L + E D +V+ G L P+ ++ + G ++ Sbjct: 49 AGDENTQRANRTAFDRWGLMPRML--VGTTERDLTVDVFGLTLPSPIFMAPVGVAGICSQ 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V MAV ++ + T L + Sbjct: 107 SGHG-DLEAARAAARTGVPMAV----STLTEDPLED---VAAEFGDTPGFFQLYTPT-DR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQE----IIQPNGNTNFADL 171 D +A G + + L N Q + + F L Sbjct: 158 DLAASFVQRA-EAAGYKAIIVTLDTWIPGWRPRDLSTSNFPQLRGRCLSNYTSDPVFRGL 216 Query: 172 S-------------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + L S D+PL+LK + D+ Sbjct: 217 LPQPPEENMQATVLQWAGMFGNALSWDDLPWLRSLTDLPLILKGLCH---PDDVRRAKDG 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + + G Sbjct: 274 GVDGIYCSTHGGRQ------------------ANGGLPAIDCLPVVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI+K++ LGA+ G+ P+ A+ +D +V + SL E + M + G + Sbjct: 316 VRSGADIVKALALGATAVGIGRPYAYGLALGGTDGLVHVLRSLLAETDLIMAVDGYPTLA 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLTPDTV 382 >gi|289524092|ref|ZP_06440946.1| dehydrogenase, FMN-dependent family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502748|gb|EFD23912.1| dehydrogenase, FMN-dependent family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 336 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 106/311 (34%), Gaps = 28/311 (9%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + + +A+ E D+ D VE G+KL+ P++ +++ G RI Sbjct: 44 SAKNNYEALREIKFRMKAIHE--VDKPDIGVELFGQKLALPVIGAAVAGARVNFSGRIEE 101 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A+ A+ + + +E A V + D +++ Sbjct: 102 KEFAKAQLEG---ALDAGTIAMIGDGPGDLYENTIDALTEVGKGIVIIKPRKLDEIIRRI 158 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN-GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 A GA + + ++ + G + + S +P+++K + ++ Sbjct: 159 RIA-EEAGALAVGIDVDAAGLVNMRKSGEYVGPISCKVLEEICSKTALPVIVKGI---MT 214 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + +G ++ GG + + I +D Sbjct: 215 EEEAVAAYNAGAGAIVVSNHGGRVLDDLPGTVSVLPKIASKIKD---------------- 258 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVS 315 +A GG+R+G D+LK + LGA + P + A D V E L E V+ Sbjct: 259 -RCVVLADGGVRSGSDVLKFLALGARAVLVGRPVVWGAFGGGRDGVRLLYEKLADELSVA 317 Query: 316 MFLLGTKRVQE 326 M L + + E Sbjct: 318 MILTSCQSIAE 328 >gi|91213857|ref|YP_543843.1| putative FMN-dependent dehydrogenase [Escherichia coli UTI89] gi|191170692|ref|ZP_03032244.1| lactate oxidase [Escherichia coli F11] gi|91075431|gb|ABE10312.1| putative FMN-dependent dehydrogenase [Escherichia coli UTI89] gi|190908916|gb|EDV68503.1| lactate oxidase [Escherichia coli F11] Length = 405 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 116/344 (33%), Gaps = 57/344 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 82 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 140 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 141 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 196 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 197 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 251 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 252 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 308 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 309 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 351 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 P L A V IE L+ E +M L G + +++L Sbjct: 352 GRPVLYGIAAGGVGGVAGVIEHLKTELRTAMLLSGARTLKDLAQ 395 >gi|295103504|emb|CBL01048.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Faecalibacterium prausnitzii SL3/3] Length = 339 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 107/324 (33%), Gaps = 55/324 (16%) Query: 21 RNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE------ 73 RN + D + L P D ++E GK +P + G + Sbjct: 47 RNYNKWADIRVNMDTLCPG---GAPDTTLELFGKSFRYPFFAGPV--GAVNLHYSDTYTD 101 Query: 74 -RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 N L A + +A G ++ + + A + + V + Sbjct: 102 MTYNDVLVRACAENGIAAFTGDG----TNP------TVMEMATRAIGAAGGCGVPTIKPW 151 Query: 133 GVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + + + A G F L L+ + P G+ + ++ + + Sbjct: 152 NIDTIREKMAQAKASGCFAVAMDVDAAGLPFLKNMTPPAGSKS----VEELTEIVQLAER 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K V ++ ++G ++ GG + + ++ +I + G Sbjct: 208 PFIVKGV---MTVKGALKAKQAGAAAIVVSNHGGRVLDQCPATAEVLPEIAAALKGTG-- 262 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVA 303 + + GG+R GVD+ K++ LGA + PF+ + V Sbjct: 263 --------------VKVLVDGGIRTGVDVFKALALGADGVLICRPFVTAVYGGGAEGVKC 308 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 I+ L E +M + G + E+ Sbjct: 309 YIDKLAGELADTMQMCGAHTLAEI 332 >gi|260774228|ref|ZP_05883143.1| L-lactate dehydrogenase [Vibrio metschnikovii CIP 69.14] gi|260611189|gb|EEX36393.1| L-lactate dehydrogenase [Vibrio metschnikovii CIP 69.14] Length = 378 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 120/374 (32%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 ++ + RN D L R L E+ E G+ L+ P+ ++ + TG + Sbjct: 31 REDTLRRNTTDLADIALRQRVL--NDMSELSLETELFGESLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AA + + + + + + L R + + + + Sbjct: 89 EV---QAAHAAANKGIPFTLSTVSVCPIEEVTATLTRPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEII---------------- 160 V D V A + G + + LQ + Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAASRRI--LQAMTHPRWAWDVGLLGKPHD 203 Query: 161 ---------QPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 P ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGMPTKLEDYIGWLGNNFDPSISWQDLEWIRDFWDGPMVIKGI---LDVEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTAQALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 ILVDSGIRSGLDVVRMLALGADCTLLGRAFIYALAAQGQAGVEHLLDLFDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G KRVQ+L ++ + Sbjct: 363 GAKRVQDLSRDSLV 376 >gi|110643930|ref|YP_671660.1| putative FMN-dependent dehydrogenase [Escherichia coli 536] gi|110345522|gb|ABG71759.1| putative FMN-dependent dehydrogenase [Escherichia coli 536] Length = 409 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 122/352 (34%), Gaps = 59/352 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 86 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 144 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 145 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 200 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 201 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 255 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 256 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 312 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 313 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 355 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L A V + IE L+ E +M L G + +++L + IR++ Sbjct: 356 GRPVLYGIAAGGVGGVASVIEHLKTELRTAMLLSGARTLKDL--SQGFIRNK 405 >gi|115386172|ref|XP_001209627.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190625|gb|EAU32325.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 358 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 111/330 (33%), Gaps = 80/330 (24%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN--- 76 D N+ R + EVD S L + PL I TG + + IN Sbjct: 64 DANEAMLKRIWFRPRVMK--DVSEVDTSSTVLNIPVKLPLFICP-TG----LAKLINPEA 116 Query: 77 -RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 + LA AA+ T + + S + E+ Q AP + L + + + Sbjct: 117 EKGLARAAKLTGILE-------ILSTNAGHPVGEIVQEAPGYPFLFQL-YLNKQKEKSRE 168 Query: 136 KAHQAVHVLGADGLFLHLNPLQ----------------EIIQP----------------- 162 A LG +FL ++ EI+ P Sbjct: 169 TLRMA-ESLGMKAIFLTVDAAGRGKRESDERLRVYDAVEIVNPVTGERVKPDKKGGGLTR 227 Query: 163 -NGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 G+ ++ + IA + S +P++LK + ++ D ++ ++ + ++ GG + Sbjct: 228 AMGSYIDQGMTWRDIAWIRSVTRLPIILKGIT---NAEDAKIAMQHNVEGIMLSNHGGRN 284 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKS 276 P+ L L C E + GG R G DI+K+ Sbjct: 285 LDYTP------------------PSILLLLELHKNCPEVFDRMEIYVDGGFRRGGDIIKA 326 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + LGA G+ FL ++ V +E Sbjct: 327 LCLGAKAVGIGRSFLYALHYGTEGVEHLVE 356 >gi|307556474|gb|ADN49249.1| putative FMN-dependent dehydrogenase [Escherichia coli ABU 83972] Length = 405 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 117/344 (34%), Gaps = 57/344 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 82 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 140 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 141 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 196 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 197 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 251 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 252 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 308 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 309 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 351 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 P L A+ V IE L+ E +M L G + +++L Sbjct: 352 GRPVLYGIAVGGVGGVAGVIEHLKTELRTAMLLSGARTLKDLAQ 395 >gi|145224716|ref|YP_001135394.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium gilvum PYR-GCK] gi|145217202|gb|ABP46606.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium gilvum PYR-GCK] Length = 386 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 119/367 (32%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 + N+ FD W L+ R L + E D +V+ G L P+ ++ + G ++ Sbjct: 49 AGDENTQRANRTAFDRWGLMPRML--VGTTERDLTVDVFGLTLPSPIFMAPVGVAGICSQ 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V MAV ++ + T L + Sbjct: 107 SGHG-DLEAARAAARTGVPMAV----STLTEDPLED---VAAEFGDTPGFFQLYTPT-DR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQE----IIQPNGNTNFADL 171 D +A G + + L N Q + + F L Sbjct: 158 DLAASFVQRA-EAAGYKAIIVTLDTWIPGWRPRDLSTSNFPQLRGRCLSNYTSDPVFRGL 216 Query: 172 S-------------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + L S D+PL+LK + D+ Sbjct: 217 LPQPPEENMQATVLQWAGMFGNALSWDDLPWLRSLTDLPLILKGLCH---PDDVRRARDG 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + + G Sbjct: 274 GVDGIYCSTHGGRQ------------------ANGGLPAIDCLPVVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI+K++ LGA+ G+ P+ A+ +D +V + SL E + M + G + Sbjct: 316 VRSGADIVKALALGATAVGIGRPYAYGLALGGTDGLVHVLRSLLAETDLIMAVDGYPTLA 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLTPDTV 382 >gi|302804424|ref|XP_002983964.1| hypothetical protein SELMODRAFT_119126 [Selaginella moellendorffii] gi|300148316|gb|EFJ14976.1| hypothetical protein SELMODRAFT_119126 [Selaginella moellendorffii] Length = 357 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 99/341 (29%), Gaps = 45/341 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F + + L + D + LG +++ P++++ +K+ Sbjct: 30 AEDKWTLRENRSAFSRIRIRPQVL--VDVSHTDLTTSVLGLEIACPIMVAPTAL--HKLA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + V S + + F + Sbjct: 86 HPEGELATARATAAANTVMVVSTSSSHTIEEIADTGPGIRFFQLYIFNKVRAMELVARAE 145 Query: 122 NLG--AVQLNYDFGV-----QKAHQAVHVLGADGLFL-HLNPLQEIIQPNGNTNFADL-S 172 G A+ L D + ++ FL P + + Sbjct: 146 KAGYKAIVLTVDTPILGRREDDLRNSISEPFLLVFFLQPTEPGSSLAAVASEYKDKSITW 205 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + +P LLK + L+ D + + ++ GG + + + Sbjct: 206 KDVQAFMKLTKLPFLLKGI---LTKEDALKAIDICVDGIIVSNHGGRQLDHVPATISVLE 262 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL- 291 ++ GG+R G D+ K++ LGAS + P L Sbjct: 263 EV-----------------VAAAAGRCPVFVDGGIRRGTDVFKALALGASGVFVGRPVLF 305 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+D V ++ L+ E +M + G + + ++ Sbjct: 306 GLAIDGEQGVKKVLDMLKDELRTTMVIAGCPTLAHINRSSV 346 >gi|115757030|ref|XP_791249.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961441|ref|XP_001178510.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 740 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 116/354 (32%), Gaps = 77/354 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + ++ F + L R L ++S D S G+ +SFP+ +S + Sbjct: 32 ADEEVTLRDSRLAFKRYRLRPRILRDVSIR--DLSTTIQGQPISFPVCLSPSAFHKLAIP 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E + A AAEK M + S ++ AP + N+ + N D Sbjct: 90 EG-EKETARAAEKCGTLMCLSSMSSTTM-------ADVADAAPSGLFWMNI-YILKNRDV 140 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQ--------------------------------EII 160 +A G GL + ++ + E++ Sbjct: 141 TKHLIREA-ERCGFKGLIMTMDSPKLGNHVRTARRRMYDVLDDRFVRASNFDIPHIPEVV 199 Query: 161 QPN-----------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 + + + + + + +P++ K V L+ + + G+ Sbjct: 200 EAKKKEPLLIKYFVSQVSDSPTIEDVKWIKTLTKLPIIAKGV---LTGESARMLAEGGVD 256 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + + D S++ + + + GG+R Sbjct: 257 GILVSAHGGRQLDYLPAPIDALSEVVEAVRGY----------------PVEVYMDGGVRR 300 Query: 270 GVDILKSIILGASLGGLASPFLKPAM---DSSDAVVAAIESLRKEFIVSMFLLG 320 G D+ K++ +GA + P L + +E LR+E ++M L G Sbjct: 301 GTDVFKALAMGARAVFIGRPALWGLAFKGKGEEGAAQVLEILRQELSLAMALSG 354 >gi|304313298|ref|YP_003812896.1| FMN-dependent alpha-hydroxy acid dehydrogenase [gamma proteobacterium HdN1] gi|301799031|emb|CBL47274.1| FMN-dependent alpha-hydroxy acid dehydrogenase [gamma proteobacterium HdN1] Length = 366 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 122/351 (34%), Gaps = 57/351 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F L R L + + + + EFLG+ P+ ++ + + + Sbjct: 41 SEFTLRANRQAFQSLMLQQRVL--VDCRQGNTTCEFLGQSFRHPIFLAPVA---FQTLVH 95 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVMFSDH-----------------NAIKSFELRQYAP 115 LA AA+ + M + + ++ +L Q A Sbjct: 96 PEGELASARAAQALEAGMICSTLSSFSLEEIAQHHPDGLWFQLYFQAERAQTRDLLQRAE 155 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN----PLQEIIQPNGNTNFADL 171 + + + G +A +A + + + +L P Q + P + F + Sbjct: 156 RAGYRALVVTLDTPLQAGSLRARRAGFTMPSSVVATNLARYSVPPQVTLMPEQSVIFQGM 215 Query: 172 SSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 ++ + L + +P++ K V D + G+ ++ GG + + Sbjct: 216 MNEAPTWGDLEWLLAETRLPVIAKGVTHA---EDAKRLAAMGVSAMVVSNHGGRALDGMP 272 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLG 284 + + SL R GG+R+G DI K++ GA+ Sbjct: 273 A------------------SLQSLRCVRDALGAGYPIFLDGGIRSGSDIFKALASGANAV 314 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + FL A+ V I+ +R+E + M L G + ++ L+ + Sbjct: 315 LIGRSFLYALAVAGPLGVAHVIKLMREELELCMALAGCPTLSDISLDALYL 365 >gi|300978232|ref|ZP_07174182.1| Tat pathway signal sequence [Escherichia coli MS 200-1] gi|300308152|gb|EFJ62672.1| Tat pathway signal sequence [Escherichia coli MS 200-1] gi|307629376|gb|ADN73680.1| putative FMN-dependent dehydrogenase [Escherichia coli UM146] gi|315295477|gb|EFU54805.1| Tat pathway signal sequence [Escherichia coli MS 153-1] gi|324014437|gb|EGB83656.1| Tat pathway signal sequence [Escherichia coli MS 60-1] Length = 409 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 116/344 (33%), Gaps = 57/344 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 86 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 144 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 145 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 200 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 201 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 255 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 256 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 312 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 313 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 355 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 P L A V IE L+ E +M L G + +++L Sbjct: 356 GRPVLYGIAAGGVGGVAGVIEHLKTELRTAMLLSGARTLKDLAQ 399 >gi|153835854|ref|ZP_01988521.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AQ3810] gi|149750608|gb|EDM61353.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AQ3810] gi|328469290|gb|EGF40236.1| L-lactate dehydrogenase [Vibrio parahaemolyticus 10329] Length = 379 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + Q + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--FQAMRHPSWAVDVGLLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTAKALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 IFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + +L ++ + Sbjct: 363 GAKTIADLSRDSLV 376 >gi|221120563|ref|XP_002166250.1| PREDICTED: similar to LOC100101335 protein [Hydra magnipapillata] Length = 408 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 119/346 (34%), Gaps = 67/346 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMIERINRNL--AIAA 83 + R L + +V+ + G+ + P+ + S+M + + + + A A Sbjct: 85 KLRIRPRVL--LGVSKVNTETKVCGQNIKIPICVAPSAM-----QKMAHSDGEIGVAKAV 137 Query: 84 EKTKVAMAVGS--------------------QRVMFSDHNAIKSFELR--QYAPHTVLIS 121 +M V + Q ++ D K R + +L + Sbjct: 138 ASFGTSMGVSTFSTTSYEDISAAAPNAVLLMQLYVYKDKELSKWLIQRAEKAGYKAILFT 197 Query: 122 ----NLG--AVQLNYDFGVQKAHQAVHVLGADGLFLH-LNP--LQEIIQPNGNTNFADLS 172 LG + + F + Q ++ G DG + N L E + + + Sbjct: 198 VDAPKLGQRIADVRHKFKLPDHLQLANLKGYDGHQISSENSSGLMEYVNKQIDPSINW-- 255 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I + S +P+ LK + L+ D LK I+ ++ GG + + Sbjct: 256 DSIKWIRSITSLPIFLKGI---LTKEDAIESLKYDIQGIIVSNHGGRQLDGCPATIEALP 312 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I + + GG+R G DI K++ LGA + P L Sbjct: 313 EI-----------------VKAVNGKIDVYLDGGIRKGTDIFKALALGAKAVFIGRPALW 355 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + D V ++ L+ E +M L G ++++ ++ H+ Sbjct: 356 GLAYNGEDGVKTVLQILKDELERAMILAGCSSLEDIK--PCMVVHE 399 >gi|223986771|ref|ZP_03636755.1| hypothetical protein HOLDEFILI_04078 [Holdemania filiformis DSM 12042] gi|223961258|gb|EEF65786.1| hypothetical protein HOLDEFILI_04078 [Holdemania filiformis DSM 12042] Length = 369 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 103/321 (32%), Gaps = 38/321 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERI 75 RN + + L + E+D + G +S P+ + + G G E Sbjct: 75 RNVEKLKSVRIQMDVL--VENKEIDTTSTLFGHTVSLPVYCAPVAGIKNNYGAEMTEEEY 132 Query: 76 NRNLAIAAEKTKVAMAVGSQRVM---FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 N+ + G + F+ P G F Sbjct: 133 NKATVEGCLEAGTLAFTGDGIDIDTLFAKPLQAVLDHDGMGIPTIKPWCEEGVQARIERF 192 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 K + A GL L L++ P N + AD K+ ++ +PL++K V Sbjct: 193 KGHKVFALATDVDAAGLVL----LRKGTTPVVNKSVAD-LKKMKEMAG--GIPLIVKGV- 244 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 L+ +++G ++ GG S ++ +I Sbjct: 245 --LTVEGARKCVEAGADAIVVSNHGGRVLDDALSTIEVLPEIAA---------------- 286 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKE 311 + + GG R G+D+ K++ LGA + P L + V ++ +R E Sbjct: 287 -AVKGQITILVDGGFRTGLDVFKALALGADGVLIGRPLALAAVGGGKEGVRLTLDKIRSE 345 Query: 312 FIVSMFLLGTKRVQELYLNTA 332 +M + G + E+ + Sbjct: 346 LRETMIMSGCSTIAEITRSHV 366 >gi|255948654|ref|XP_002565094.1| Pc22g11470 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592111|emb|CAP98435.1| Pc22g11470 [Penicillium chrysogenum Wisconsin 54-1255] Length = 502 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 124/366 (33%), Gaps = 78/366 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRN 78 N + + L R + + E+D LG KL P+ ++ +M G+ I Sbjct: 146 NNQVYRSILLRPRVFVDCTKCELD--TTVLGHKLKTPIYVAPAAMARLGHPSGEAGI--- 200 Query: 79 LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGA 125 A A A Q V + + + ++L ++ I L A Sbjct: 201 -AEACRSFGAMQIISNNASMTPEQIVKDAAPDQMFGWQLYVQIDRKKSETMLARIQKLKA 259 Query: 126 VQ---LNYDFGVQKAHQAVHVLGADGLFLHL---------------NPLQEIIQPNGNTN 167 + L D V + G G + NP E G Sbjct: 260 FKFIVLTLDAPVPGKREDDERTGMTGRTAAVPSGVKAAERASDDTPNPT-EGSGGVGQQL 318 Query: 168 FAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGT 219 FA + +A L++ D+P++LK + + D L ++ ++ GG Sbjct: 319 FAGTDPSLTWTDTLAWLATQTDLPIVLKGLQ---THEDAYLASLHTPQVKGIILSNHGGR 375 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILK 275 + P +L R YC E + GG+R G D +K Sbjct: 376 AMDTAP------------------PAVHTLLEIRKYCPEVFDKIEVYVDGGIRRGTDAVK 417 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNT 331 ++ LGA GL P L A D V ++ L E M LLG +RV +L ++NT Sbjct: 418 ALCLGAKAVGLGRPALWGLAAGGVDGVRRTLQILNDEIKTCMRLLGVERVDQLGLQHINT 477 Query: 332 ALIRHQ 337 + Q Sbjct: 478 RVTEQQ 483 >gi|227511158|ref|ZP_03941207.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus buchneri ATCC 11577] gi|227523345|ref|ZP_03953394.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus hilgardii ATCC 8290] gi|227085640|gb|EEI20952.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus buchneri ATCC 11577] gi|227089451|gb|EEI24763.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus hilgardii ATCC 8290] Length = 369 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 68/357 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-LLISSMTGGNNKMIE 73 + + N++ F ++ RAL + ++ + G L P ++ + G + Sbjct: 46 DEWTLRENRRAFTHKQIVPRAL--TNIEKPELETNVFGIPLKTPLFMVPAAAQGLAHVKG 103 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 ++ +AA +A + S + + AP + N + Sbjct: 104 EVDTAKGVAAVGGLMAQSTYSSTSI------ADTAASGTGAPQFFQLYMSKDWDFN-EAL 156 Query: 134 VQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNFAD---------------------- 170 + +A +A G G+ L ++ + + + NF Sbjct: 157 LDEAKRA----GVKGIILTVDATVDGYREADIINNFQFPIPMANLTKYSEDDGQGKGIAE 212 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 S +A +++ D+P+++K + S D + +G ++ GG Sbjct: 213 IYASAAQKIGSDDVARIANYTDLPVIVKGIE---SPEDALYAIGAGASGIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ D+ A+ + I G+R G D+ K++ GA Sbjct: 270 NGGPASFDVLEDV-----------------AKAVNGKVPVIFDSGIRRGSDVFKALASGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL-IRH 336 L G+ P + A+ + V + E L E + M L GTK + ++ L IR+ Sbjct: 313 DLVGIGRPVIYGLALGGAQGVQSVFEHLDHELEIIMQLAGTKTISDVKNAKLLNIRY 369 >gi|226290453|gb|EEH45937.1| cytochrome b2 [Paracoccidioides brasiliensis Pb18] Length = 473 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 116/358 (32%), Gaps = 68/358 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N + L R I D S LG KL P+ +S +M + E + Sbjct: 123 NNTIYRSILLRPRVF--IDCTNCDLSTSVLGYKLGLPIYVSPAAMARLAHPAGE---AGI 177 Query: 80 AIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----L 123 A A K A + V + + + ++L R+ + + N + Sbjct: 178 AAACSKFNAMQLISNNASMTPKEIVANAAPDQVFGWQLYVQTDRKKSEAMLARINKLKSI 237 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD------------- 170 V L D V + + + + + + Sbjct: 238 KFVCLTLDAPVPGKREHDERTQTVTQTSSVTDIVKASGGTPLPSASGIGQQLFAGTDPSL 297 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESH 227 S + L+ D+P++LK V + D + G + ++ GG + Sbjct: 298 TWSKTLPWLARHTDLPIVLKGVQ---THEDAYIASLHGPQVKAIILSNHGGRAMDTAP-- 352 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASL 283 P +L R YC E + GG++ G D++K++ LGA Sbjct: 353 ----------------PAVHTLMEIRKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARC 396 Query: 284 GGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ P + V +E L E +M LLG RV++L ++N + Q Sbjct: 397 VGVGRAPLFGLGAGGVEGVERVLEILSSETKTAMHLLGVGRVEDLGMQHINARAVEQQ 454 >gi|28901354|ref|NP_801009.1| L-lactate dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|260362910|ref|ZP_05775779.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus K5030] gi|260880197|ref|ZP_05892552.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AN-5034] gi|260895314|ref|ZP_05903810.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus Peru-466] gi|260901139|ref|ZP_05909534.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AQ4037] gi|81839594|sp|Q87G18|LLDD_VIBPA RecName: Full=L-lactate dehydrogenase [cytochrome] gi|28809901|dbj|BAC62842.1| L-lactate dehydrogenase [Vibrio parahaemolyticus RIMD 2210633] gi|308085577|gb|EFO35272.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus Peru-466] gi|308091864|gb|EFO41559.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AN-5034] gi|308109361|gb|EFO46901.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus AQ4037] gi|308112089|gb|EFO49629.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus K5030] Length = 379 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + Q + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--FQAMRHPSWALDVGLLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTAKALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 IFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + +L ++ + Sbjct: 363 GAKTIADLSRDSLV 376 >gi|46109860|ref|XP_381988.1| hypothetical protein FG01812.1 [Gibberella zeae PH-1] Length = 500 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 110/351 (31%), Gaps = 82/351 (23%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA--IAAEK 85 + R L + V+ LG + P IS + + LA AA Sbjct: 169 RLMIRPRIL--RNVSNVNFKTNILGLDSNAPFFISPAA---MARLAHPDGELALSRAAAN 223 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + S SF L+ + P + V ++ V+ + V Sbjct: 224 EGIIQCISSN----------ASFSLKSIVKAVPSSQPFFFQLYVNSDHSKTVE-LLRMVA 272 Query: 143 VLGADGLFLHLNP------------LQE------IIQPNGNTNFADL------------- 171 LG +F+ ++ QE I + + Sbjct: 273 DLGVKAIFVTVDAPVPGKREADERAAQEQTVKSAISGGESSKDKKGSGFGRLMAQYIDKT 332 Query: 172 --SSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + + A +P++LK V ++ D+ + G+ ++ GG S ++ Sbjct: 333 LSWDDLGWIREASGGLPIVLKGVQ---TAEDVIQAAEYGVEGVLLSNHGGRSLDGAQA-- 387 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLG 284 + L L R C E + GG G DILK+I LGA+ Sbjct: 388 ----------------SILVLLELRKNCPEIFDKIEIYIDGGFERGSDILKAICLGATAV 431 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 G+ PFL + D L+ E SM L G + + +LI Sbjct: 432 GIGRPFLYSLIHGQDGAEHLCHILKDELETSMRLCGITSLSQAK--PSLIN 480 >gi|299755726|ref|XP_001828841.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] gi|298411354|gb|EAU92848.2| cytochrome b2 [Coprinopsis cinerea okayama7#130] Length = 502 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 71/335 (21%), Positives = 119/335 (35%), Gaps = 62/335 (18%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTG---GNNKMIERINRNLAIAAEKTKVAMAVGSQRV 97 E DPS LG + + P+ +S G+ K I R A K + V S Sbjct: 166 VGECDPSTTILGYQSAIPVFVSGAALAKLGHPKGEVNITRG----AWKEGIIQMVSS--- 218 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL- 156 + + + + AP VL L + V++ + V LG +FL ++ + Sbjct: 219 ---NASLSYTEIMAAAAPSQVLFFQL-YKNKDDSVAVERVRE-VERLGYRAIFLTVDAIV 273 Query: 157 ----------------QEI----IQPNG----------------NTNFAD--LSSKIALL 178 QE + N + D I L Sbjct: 274 AGNREADIRSPWTLEDQESGTIPVWDENVPVDEVNLGGTAGALVNRDDKDMTWEKTIPWL 333 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S +P+++K + C D +G+ ++ GG S S + S DI Sbjct: 334 RSITKLPIVIKGIQC---VEDAVAAADAGVDGILLSNHGGNSTSMLSSVARFNQDIAGRQ 390 Query: 239 QDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 D+ +P L R + + GG+ G D++K++ LGA GL FL Sbjct: 391 LDYSLPPIEVLHRIRLERPDVFDRLEVYIDGGIYRGTDVVKALCLGARAVGLGRAFLYAQ 450 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + V+ + L++E + +M L+G + V EL Sbjct: 451 SAYGEAGVIKITQLLKREIVTAMRLVGARNVAELK 485 >gi|227886637|ref|ZP_04004442.1| possible (S)-2-hydroxy-acid oxidase [Escherichia coli 83972] gi|300977776|ref|ZP_07174044.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1] gi|301049191|ref|ZP_07196167.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1] gi|227836382|gb|EEJ46848.1| possible (S)-2-hydroxy-acid oxidase [Escherichia coli 83972] gi|300299010|gb|EFJ55395.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1] gi|300409802|gb|EFJ93340.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1] Length = 409 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 117/344 (34%), Gaps = 57/344 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--- 69 + N++ F D+ L+ L ++ +D + LG L PLLI+ M G + Sbjct: 86 AGDEWTYHENRRAFSDYPLLPHRLSGVAAHSIDIRTDLLGHHLEHPLLIAPM-GAHMFVH 144 Query: 70 ------------------KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 + NR+L A+ A ++ + +A + L Sbjct: 145 PEGEVIAAAGAEKAGALYESSGASNRSLEDIAK----ASKGPKWFQLYFNADAGVTRSLL 200 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD- 170 + A + + A F + +P + G +F + Sbjct: 201 ERAKAAGYSAIIITADALGPGTSDAFLSMSSPFPAGATFGNHDP-----RYGGKGDFFNQ 255 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + I + +P+++K + G D + + +G ++ GG + S Sbjct: 256 KVELTPADIEFVKKITGLPVIVKGILRG---EDAVVAIDAGADAIQVSNHGGRQIDGVPS 312 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ ++ I G+R G+D++++I LGA+ + Sbjct: 313 AISQLQEVAA-----------------RVGHKVPVIFDSGIRRGIDVVRAISLGATAVAV 355 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 P L A+ V IE L+ E +M L G + +++L Sbjct: 356 GRPVLYGIAVGGVGGVAGVIEHLKTELRTAMLLSGARTLKDLAQ 399 >gi|238924086|ref|YP_002937602.1| L-lactate dehydrogenase [Eubacterium rectale ATCC 33656] gi|238875761|gb|ACR75468.1| L-lactate dehydrogenase [Eubacterium rectale ATCC 33656] Length = 340 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 43/321 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI----- 75 RN + + + E VD S+ G+ +P+ + + + Sbjct: 47 RNYDKWKQIRVNMDTIAENKP--VDTSLSLFGRTFKYPVFAGPVGAVQLHYGDCLDDVTY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N L A K +A G +D N + + I + + ++ Sbjct: 105 NDILVSACAKNGIAAFTGDG----TDPNVMVAATKAIKNADGAGIPTVKPWNIE---TIR 157 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + VH GA + + ++ L+ + P G+ S++ + P ++K Sbjct: 158 EKMELVHESGAFAVAMDVDAAGLPFLKNLDPPAGSKT----VSELCDIIQMAGTPFIVKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ ++G ++ GG + + ++ I + GI Sbjct: 214 I---MTVKGALKAKEAGASAIIVSNHGGRVLDQCPATAEVLESIVKALEGSGI------- 263 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 + + GG+R+G D+ K++ LGA + PF+ +D V A I+ + Sbjct: 264 ---------KILVDGGIRSGTDVFKALALGADGVLITRPFVTAVYGGKADGVRAYIDKIG 314 Query: 310 KEFIVSMFLLGTKRVQELYLN 330 E +M + G + E+ + Sbjct: 315 TELEDTMKMCGVSSLDEITRD 335 >gi|223949369|gb|ACN28768.1| unknown [Zea mays] Length = 369 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 114/355 (32%), Gaps = 62/355 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I ++D + LG K+S P++++ KM Sbjct: 30 AEDEWTLQENREAFSRILFRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 N A + S S + ++ R+ V + Sbjct: 86 HPDGENATARAAAAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRKVVEQLVRRA 145 Query: 122 N---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL------------------NPLQEII 160 A+ L D + + + L HL + L + Sbjct: 146 ERAGFKAIALTVDTP-RLGRREADIKNRFVLPPHLTLKNFEGLDLGKMDQAADSGLASYV 204 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L + +P+L+K V L++ D L + +G ++ G Sbjct: 205 AGQVDRTLSW--KDVKWLQTITTLPILVKGV---LTAEDTRLAVANGAAGIIVSNHGARQ 259 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T +LE + + GG+R G D+ K++ L Sbjct: 260 LDYVPA------------------TISALEEVVKAARGQLPVFVDGGVRRGTDVFKALAL 301 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GA+ + P + A V + LR EF ++M L G + E+ + Sbjct: 302 GAAGVFVGRPVVFSLAAAGEAGVSNVLRMLRDEFELTMALSGCTSLAEITRKHII 356 >gi|296200152|ref|XP_002747392.1| PREDICTED: hydroxyacid oxidase 1 [Callithrix jacchus] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 114/358 (31%), Gaps = 80/358 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG++++ P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVTMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACHSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-----------------PLQ-EIIQPNGNT----- 166 + + QA G +F+ ++ P Q + +T Sbjct: 137 REVTKRLVRQA-EKTGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFENSTLSFSP 195 Query: 167 -----NFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + L I L +P++ K + G D +K G+ Sbjct: 196 EESFGDDSGLAAYVVKAIDPSINWEDIKWLRRLTSLPIVAKGILRG---DDAREAVKHGL 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + + D +I + + GG+R Sbjct: 253 NGILVSNHGARQLDGVPATIDALPEI-----------------VEAVEGKVEVFLDGGVR 295 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+LK++ LGA + P A V +E L++EF ++ L G + V+ Sbjct: 296 KGTDVLKALALGAKAVFVGRPVIWGLAFQGEKGVRDVLEILKEEFRLATALSGCQNVK 353 >gi|242278937|ref|YP_002991066.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio salexigens DSM 2638] gi|242121831|gb|ACS79527.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio salexigens DSM 2638] Length = 336 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 114/325 (35%), Gaps = 43/325 (13%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N K ++ L R + E F E D SV +G L P++ + + G M +++ Sbjct: 42 SFKNNVKALENLKLNMRTIHE--FSEPDTSVNVMGIDLDIPVIAAPIGGVEFNMGGKVSE 99 Query: 78 -----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 N + + G F + ++ H + + Sbjct: 100 LDYVTNKLKGCKNKGIIGCTGDGVPPFIHESGFA--AIKDVDGHGIPFIK-PWEDKELNE 156 Query: 133 GVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 +QKA + ++G D L L+++ G K+ + +++ +LK + Sbjct: 157 KLQKAEETGCKIIGMDIDAAGLITLKKM----GRPVTPKCMRKLREIIESVNADFILKGI 212 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ + + + +G + ++ GG T L Sbjct: 213 ---MTPDEARMAIDAGAKGIVVSNHGGRVLDSCPG------------------TAEVLFE 251 Query: 252 A-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 R + + GG+R G+D+LK + LGA + PF + + V I+ L+ Sbjct: 252 ISRAVAGQCAVMVDGGVRTGIDVLKMLALGADAVMIGRPFSIATVGGLQEGVEKYIDQLK 311 Query: 310 KEFIVSMFLLGTK-----RVQELYL 329 E ++ L GT+ ++ LY Sbjct: 312 AELTAAIVLTGTEKASFVDIRALYR 336 >gi|261289797|ref|XP_002611760.1| hypothetical protein BRAFLDRAFT_236305 [Branchiostoma floridae] gi|229297132|gb|EEN67770.1| hypothetical protein BRAFLDRAFT_236305 [Branchiostoma floridae] Length = 348 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 111/310 (35%), Gaps = 51/310 (16%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR--- 96 D S LG+++ FP+ +S TG + + + +A A + MAV + Sbjct: 52 DVSHRDLSTTLLGERVEFPIGVSP-TGLKDIAWPQGDIYVAKVAAEMGACMAVSTFSNSS 110 Query: 97 ---VMFSDHNAIKSFELRQYAPHTVLISNL-------GAVQLNYDFGVQKAHQAVHVLGA 146 +M + + +K F++ + P+ V L G L + + + Sbjct: 111 AEDIMAASPHGLKWFQM-YFMPNKVFTQRLIQKVERAGYKALVVTVDLPIVGKRYSDIRN 169 Query: 147 DG-LFLH--------LNPLQE-----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 L H L E + + I LSS ++P++LK + Sbjct: 170 KFQLPSHVTVPNLLALKDGSEQDGRNYGMGGSPQDPSFSWKDIDWLSSITNLPIILKGI- 228 Query: 193 CGLSSMDIELGLKS-GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 L++ D + L G++ ++ GG + + + +I Sbjct: 229 --LTAEDAGIALDHPGVKGILVSNHGGRQLDGVPATIEALPEI----------------- 269 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRK 310 ++ + GG+R G D LK++ LGA L P + + V ++ LR Sbjct: 270 VGAAGDKLEVYLDGGVRTGTDALKALALGARAVFLGRPVIWGLTFSGEEGVRQVMKILRD 329 Query: 311 EFIVSMFLLG 320 E ++M L G Sbjct: 330 ELDLAMALSG 339 >gi|242037893|ref|XP_002466341.1| hypothetical protein SORBIDRAFT_01g005960 [Sorghum bicolor] gi|241920195|gb|EER93339.1| hypothetical protein SORBIDRAFT_01g005960 [Sorghum bicolor] Length = 368 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 115/358 (32%), Gaps = 62/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I ++D + LG K+S P++++ KM Sbjct: 30 AEDEWTLKENREAFSRILFRPRIL--IDVSKIDMTTSVLGFKISMPIMVAPTA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL------- 119 A + S S + F+L + V+ Sbjct: 86 HPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVHKDRKVVEQLVRRA 145 Query: 120 -ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------------NP--LQEII 160 + A+ L D + + + L HL N L + Sbjct: 146 ERAGFKAIALTVDTP-RLGRREADIKNRFVLPPHLTLKNFEGLDLGKMDQANDSGLASYV 204 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L S +P+L+K V +++ D L + SG ++ G Sbjct: 205 AGQIDRTLSW--KDVKWLQSITSMPILVKGV---VTAEDARLAVHSGAAGIIVSNHGARQ 259 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T +LE + GG+R G D+ K++ L Sbjct: 260 LDYVPA------------------TISALEEVVKAAQGRIPVYLDGGVRRGTDVFKALAL 301 Query: 280 GASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 GA+ + P + A + V + LR EF ++M L G + ++ + L Sbjct: 302 GAAGIFVGRPVVFALAAEGEAGVRNVLRMLRDEFELTMALSGCTTLADINRSHVLTEG 359 >gi|295701044|ref|YP_003608937.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1002] gi|295440257|gb|ADG19426.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1002] Length = 381 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 116/374 (31%), Gaps = 75/374 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN F L+ L + +VD SV+ LG++L+ P+ S T Sbjct: 32 ADDEVTYRRNTASFQQCDLVPNVLRGVG--DVDLSVQVLGQRLAMPVYCSP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF---ELRQYAPHTVLISNLGAVQLN 129 R +A AA K V S S K+F ++ Q+ H N +Q Sbjct: 89 HEGERAVAAAASKYGTMFGVSSLG-TVSMEELRKAFPTPQVYQFYFHKDRGLNRAMMQRA 147 Query: 130 YDFGVQKAHQAVHVLGAD--------------------GLFLHLNP--------LQEIIQ 161 + G+ V + L L P + Sbjct: 148 KETGIDVMMLTVDSITGGNRERDLRTGFTIPFRLTLGGILQFALKPRWVLNYVTHERFSM 207 Query: 162 P--NGNTNFADL-----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 P + +F +A + D LK V +S D + Sbjct: 208 PQLETHVDFGGGAMSIGRYFTEMLDPSMNWDDVAEMVRDWDGQFCLKGV---MSVEDAKR 264 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG + D +++ ++ I Sbjct: 265 AAAIGCTGIVLSNHGGRQLDGSRAAFDQLAEV-----------------VDAVGDKLDVI 307 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG++ G +LK++ LGA G+ +L P A V A+ +R E + M L+G Sbjct: 308 MDGGVQRGTHVLKALALGAKAVGVGRYYLFPLAAAGQAGVERALALMRTELVRGMKLMGC 367 Query: 322 KRVQELYLNTALIR 335 V EL + R Sbjct: 368 TSVSELSRESLRFR 381 >gi|212539596|ref|XP_002149953.1| FMN-dependent dehydrogenase family protein [Penicillium marneffei ATCC 18224] gi|210067252|gb|EEA21344.1| FMN-dependent dehydrogenase family protein [Penicillium marneffei ATCC 18224] Length = 380 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 110/340 (32%), Gaps = 49/340 (14%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N+ +D + ++ R L +D + G K+S P S + + Sbjct: 37 VKANETAYDRYRIMPRIL--RDVTNIDTTTTIFGTKVSMPFGFSPAA---MHCLAHEDGE 91 Query: 79 LA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQLNYDFGVQ 135 L AA K +AM + + + Q+ P+ + S GA + + Sbjct: 92 LGTSRAAAKAGIAMGLSHWATKSLEEVIAAGKAIPGQFNPYGIQTS--GAA---RNEDIS 146 Query: 136 KAHQAVHVLGADGLFLHLNP------LQEIIQ----PNGN--TNFADLSSKIALLSSAMD 183 Q G L + ++ L E P G N + + Sbjct: 147 ALVQKADKAGYKALLVTVDAPTIGRRLNEYRNGIDLPPGLKFPNISGDLDSFRAIKREAG 206 Query: 184 ------VPLLLKEV--------GCGLSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESHR 228 +P L V + D+ + ++ ++ GG + Sbjct: 207 TTFSDFIPWLSSVVPPHMEIWLKGIYTPEDVIMAATYPRVQGIIVSNHGGRQLDGAPATL 266 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + D S+ +R N+ GG+R G DI K++ LGA Sbjct: 267 EALPDCVAA--------ARSINASRTPENKLMIGIDGGIRRGSDIFKALALGADFCFAGR 318 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P A + + V A+E LR+E + M L G + V E+ Sbjct: 319 IPIWGLAYNGQNGVERALELLREELEMCMRLSGCRSVAEI 358 >gi|150390954|ref|YP_001321003.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alkaliphilus metalliredigens QYMF] gi|149950816|gb|ABR49344.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alkaliphilus metalliredigens QYMF] Length = 337 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 110/323 (34%), Gaps = 50/323 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL---ISSMTGGNNKMIERINR 77 RN + +D + + + E+DPS+E G+K +P+ + ++ + ++ Sbjct: 47 RNWEKLNDVKINLDTI--VMEKEIDPSIELFGRKFKYPVFAAPVGAVALNYSDELDDFTY 104 Query: 78 NLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL--------ISNLGAVQ 127 + AI + +G D ++ + + ++ Sbjct: 105 SQAIIEGCNHAGI---LGFTGDGVKDEFYDLPLQVIGEHGGNGIPTIKPWKTDEIISKIK 161 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 GV + G L L P+ + + S+ +P++ Sbjct: 162 KAEVVGVTAIAMDIDAAGLVTLALLGKPV-----------ATKSVEDLKKIISSTSIPVI 210 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ + +++G ++ GG + ++ +I Sbjct: 211 LKGI---MTVEGAKKAMEAGAYGIVVSNHGGRVLDHTPATIEVLPEI------------- 254 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIE 306 + + GG+R GVD+ K++ LGA + P++ A + V E Sbjct: 255 ----VAVVKGKMKIFIDGGIRTGVDVFKALALGADAVLIGRPYIVAAYGGGAEGVGIYTE 310 Query: 307 SLRKEFIVSMFLLGTKRVQELYL 329 + KE +M + G ++++ Sbjct: 311 KIGKELKETMIMTGCHELKDINR 333 >gi|302881861|ref|XP_003039841.1| hypothetical protein NECHADRAFT_96707 [Nectria haematococca mpVI 77-13-4] gi|256720708|gb|EEU34128.1| hypothetical protein NECHADRAFT_96707 [Nectria haematococca mpVI 77-13-4] Length = 322 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 112/336 (33%), Gaps = 75/336 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+K FD + + R L +D S E G KL+ P ++ Sbjct: 23 AMDLITVVDNEKPFDRYKIRPRVLK--DVSNLDTSTEIFGTKLAHP---------EGEVA 71 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS---NLGAVQLN 129 + AA +T + MA+ + ++ + P+ + S N G +Q + Sbjct: 72 T------SRAAAETGIPMALSAY----ANCALEDVMAEEKGNPYIMQFSILENQGRIQGS 121 Query: 130 YDFG--------VQKAHQAV--------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 +D G Q+ Q V + D F HL + + Sbjct: 122 HDGGGCTDAWSTTQRVSQLVWYPQWHGNPNILPDVDFSHLVDQAADLSYE---DSVGWEE 178 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I + S + + LK ++ G+ I+ GG + + Sbjct: 179 AIGWVKSVTKLDIWLKG------------AIEHGVAGVLISNHGGRQLDGVPA------- 219 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLGGLAS-PFL 291 T +L P IA GG++ DI K+I L A P Sbjct: 220 -----------TLDALRECAPVAKGKIKIAVDGGIQRSTDIFKAIALCADFCFAGRIPIW 268 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A D ++ V A+ L EF ++M L G K ++++ Sbjct: 269 GLAYDGAEGVKLAVNLLHDEFKIAMSLAGYKTIKDI 304 >gi|239613615|gb|EEQ90602.1| mitochondrial cytochrome b2 [Ajellomyces dermatitidis ER-3] Length = 495 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 118/355 (33%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + D + LG KL P+ + ++ + +A Sbjct: 145 NNTIYRSILLRPRVF--VDCTNCDLTTIALGHKLGLPIYVCPAA--MARLAHPVGEAGIA 200 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----LG 124 A K A + V + + + +++ R+ + + N + Sbjct: 201 AACSKFGAMQLISNNASMTPEEIVQNATSDQVFGWQIYVQTQRKKSEAMLARINKLKSIK 260 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPN-------GNTNFAD------ 170 V L D V + A + N L+E G FA Sbjct: 261 FVCLTLDAPVPAKREHDERTRAVAQATSVFNLLRESGGTPIEGGAGIGQQLFAGTDPSLT 320 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 S+ + L+ ++P++LK + + I ++ ++ GG S Sbjct: 321 WSTTLPWLAQHTNLPIVLKGIQTHEDAY-IASLHAPQVKAIILSNHGGRSMDTAP----- 374 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P +L R +C E + GG++ G D++K++ LGA G+ Sbjct: 375 -------------PAVHTLLEIRKFCPEVFDRLEVWVDGGIKRGTDVVKALCLGARCVGI 421 Query: 287 AS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 P + V +E L E +M LLG +V++L ++N + Q Sbjct: 422 GRAPLFGLGAGGVEGVERVLEILSTETKTAMRLLGVDKVEDLGMQHINARAVEQQ 476 >gi|116626283|ref|YP_828439.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116229445|gb|ABJ88154.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 365 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 121/338 (35%), Gaps = 53/338 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ +D L R L + ++D V LG +L FP+L++ TGG + Sbjct: 57 AADEITLRWNREAYDHIRLKPRVL--VDVSKIDTRVNLLGAELPFPILLAP-TGGQGFIH 113 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + A A + S M + A S + L VQ + F Sbjct: 114 PDGDAAAARGAAAAHATYVISSSASMRVEDVARAS--------TGTVWFQL-YVQKDRGF 164 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQ------------EI-------IQPNGNTNFADLSS 173 + +A G L + ++ E+ +Q + + Sbjct: 165 TREMVRRA-EDAGCRALCVTVDSPTFGLRNREERAKGELPERQLPNLQGKDYLDPSLTWK 223 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L P+LLK + L+ D + K+G ++ G + + + D Sbjct: 224 DIEWLQGIARRPVLLKGI---LNPDDAAIAAKAGASGIVVSNHGARNLDTVPATIDALP- 279 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + A I GG+R G D++K++ LGA+ + P+L Sbjct: 280 ----------------LVVEKVAGRAPVIVDGGIRRGTDVIKALALGAAAVQIGRPYLWG 323 Query: 294 A-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + ++ V +E LRKE ++M L+G + + + Sbjct: 324 LGVSGAEGVTRVVEILRKELELAMALMGRPTIASITRS 361 >gi|313898737|ref|ZP_07832272.1| dehydrogenase, FMN-dependent [Clostridium sp. HGF2] gi|312956621|gb|EFR38254.1| dehydrogenase, FMN-dependent [Clostridium sp. HGF2] Length = 341 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 105/300 (35%), Gaps = 43/300 (14%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN-----RNLAIAAEKTK-VAMAVGSQR 96 E+D + EF G K+SFP+ + ++G ++ R L + +A Sbjct: 67 EIDTTSEFFGHKVSFPVYAAPISGILQNYGAELDDMSYTRALVDGCRRAGTLAFTGDGMH 126 Query: 97 V-MFSDH----NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL 151 MF + F + P S A + A GL Sbjct: 127 DEMFKGPMSVVAQHEGFGVPTIKP----WSREHMAWRIELAKEGHALAIASDIDASGLTN 182 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 L+ I P G N +L I + DVP +LK + LS L++G Sbjct: 183 ----LRTSITPVGFKNVEELKE-ITRICG--DVPFILKGI---LSVKGARKALEAGASGI 232 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG S ++ DI + + G R G Sbjct: 233 IVSNHGGRVLDDCLSGIEVLEDI-----------------VKVVDGRMKVFVDGAFRTGN 275 Query: 272 DILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+ K++ LGA + P + + D SD +V +E +R E +M + G K +Q++ + Sbjct: 276 DVFKALALGADGVLIGRPVSQAVIGDGSDGLVTYLEKIRLELKEAMAMAGCKTIQDITRD 335 >gi|227533645|ref|ZP_03963694.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301067350|ref|YP_003789373.1| l-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Lactobacillus casei str. Zhang] gi|227188629|gb|EEI68696.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439757|gb|ADK19523.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus casei str. Zhang] Length = 371 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++ +AL I D D S FLG L P++++ + Sbjct: 46 DEWTLAENTKAFNHAQIVPKALSNI--DSPDLSTNFLGIDLKTPIMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + VA G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGVAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFAD--------- 170 +A G G+ L ++ + I PN A Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSAGDGKGKGIGE 212 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K V S D + +G ++ GG Sbjct: 213 IYASAAQKISEDDVRRIAEYTDLPVIVKGVQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ I G+R G K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKRVPIIFDSGVRRGSHAFKALAAGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ ++ V + E + E + M L GTK + ++ Sbjct: 313 DLVAFGRPVIYGLALGGAEGVQSVFEQIDHELEIIMQLAGTKTIADVKHAPL 364 >gi|261251031|ref|ZP_05943605.1| L-lactate dehydrogenase [Vibrio orientalis CIP 102891] gi|260937904|gb|EEX93892.1| L-lactate dehydrogenase [Vibrio orientalis CIP 102891] Length = 379 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 121/375 (32%), Gaps = 84/375 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + +N + D L R L + +++ E G+KLS P+ ++ + TG + E Sbjct: 32 EHTLRKNTEDLADIALKQRVL--NNMEDLSLETEVFGEKLSMPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AAE + + + + + L R + + + + Sbjct: 90 V---QAAKAAENKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAARRV--FQAMRHPSWAVDVGLMGKPHDL 204 Query: 163 ------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGEPTKLEDYIGWLGDNFDPSICWKDLEWIRDFWDGPMVIKGI---LDEQDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 + G ++ GG + + T +L +A + + Sbjct: 262 AVSFGADGIVVSNHGGRQLDGV------------------LSTAKALPSIADAVKGDLKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G Sbjct: 304 FVDSGIRTGLDVVRMLALGADCTLLGRSFIYALAAQGQTGVENLLDLYEKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTALIR 335 K +++L + +L++ Sbjct: 364 AKSIKDL-NSDSLVK 377 >gi|195028670|ref|XP_001987199.1| GH21788 [Drosophila grimshawi] gi|193903199|gb|EDW02066.1| GH21788 [Drosophila grimshawi] Length = 366 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 117/334 (35%), Gaps = 64/334 (19%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 ++D S E LG+ L++PL I+ + + + + A AA K + + Sbjct: 54 DVSKLDASCEILGEHLNWPLGIAPTA---MQKLAHPDGEIGSARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 D + K F+L Y + +N A+ L D + +A Sbjct: 111 TSLEDVAAAAPDTCKWFQLYIYRDRCLTEELVRRAERANFKALVLTVDTPINGDRRA-DA 169 Query: 144 LGADGLFLHL-------------------NPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 L HL + L E + N + + + + L + Sbjct: 170 RNHLSLPSHLTLANFKAECTQGFVSKCGGSGLNEYVACNYDPSISW--QDVKWLQQLTHL 227 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LK + LS+ D L G ++ GG + ++ +I Sbjct: 228 PIVLKGI---LSAEDALLARDIGCAGLIVSNHGGRQLDTTPASIEVLPEI---------- 274 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVA 303 + + GG+ G+DI K++ LGA + P L A + V Sbjct: 275 -------VAAVGKDMVVMMDGGIMQGIDIFKALALGAQTVFIGRPTLWGLAANGQRGVEQ 327 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + L+++F V+M L G + ++ A++ H+ Sbjct: 328 LLTILKRDFEVTMTLTGCPTLADIR--PAMVVHE 359 >gi|295659078|ref|XP_002790098.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] gi|226282000|gb|EEH37566.1| cytochrome b2 [Paracoccidioides brasiliensis Pb01] Length = 499 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 117/358 (32%), Gaps = 68/358 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N + L R I D S LG KL P+ +S +M + E + Sbjct: 149 NNTIYRSILLRPRVF--IDCTNCDLSTSVLGYKLGLPIYVSPAAMARLAHPAGE---AGI 203 Query: 80 AIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----L 123 A A K K A + V + + + ++L R+ + + N + Sbjct: 204 AAACSKFKAMQLISNNASMTPKEIVADAAPDQVFGWQLYVQTDRKKSEAMLARINKLKSI 263 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD------------- 170 V L D V + + + + + + Sbjct: 264 KFVCLTLDAPVPGKREHDERTQTVTQASSVTDIVKASGGTPLPSASGIGQQLFAGTDPSL 323 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESH 227 S + L+ D+P++LK V + D + G + ++ GG + Sbjct: 324 TWSKTLPWLARHTDLPIVLKGVQ---THEDAYIASLHGPQVKAIILSNHGGRAMDTAP-- 378 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P +L R YC E + GG++ G D++K++ LGA Sbjct: 379 ----------------PAVHTLMEIRKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARC 422 Query: 284 GGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ P + V +E L E +M LLG RV++L ++N + Q Sbjct: 423 VGVGRAPLFGLGAGGVEGVERVLEILSSETKTAMHLLGVGRVEDLGMQHINARAVEQQ 480 >gi|239630203|ref|ZP_04673234.1| NAD-independent L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527815|gb|EEQ66816.1| NAD-independent L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 371 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++ +AL I D D S FLG L P++++ + Sbjct: 46 DEWTLAENTKAFNHAQIVPKALSNI--DSPDLSTNFLGIDLKTPIMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + VA G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGVAAVGGLMAQSTYSSTSIADTAAASNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFAD--------- 170 +A G G+ L ++ + I PN A Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSAGDGKGKGIGE 212 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K V S D + +G ++ GG Sbjct: 213 IYASAAQKISEDDVRRIAEYTDLPVIVKGVQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ I G+R G K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKRVPIIFDSGVRRGSHAFKALAAGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ ++ V + E + E + M L GTK + ++ Sbjct: 313 DLVAFGRPVIYGLALGGAEGVQSVFEQIDHELEIIMQLAGTKTIADVKHAPL 364 >gi|300715771|ref|YP_003740574.1| L-lactate dehydrogenase (cytochrome) [Erwinia billingiae Eb661] gi|299061607|emb|CAX58722.1| L-lactate dehydrogenase (Cytochrome) [Erwinia billingiae Eb661] Length = 381 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 118/372 (31%), Gaps = 75/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + D L R L + +D + + LS P+ ++ + G Sbjct: 29 AYDEHTLQRNCEDLADIALRQRIL--RNMSSLDLTTTLFNETLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFELRQYAPHTVLISNLGAVQ 127 R A AA+K + + + V + N F+L + + L Q Sbjct: 86 RRGEVQAARAADKKGIPFTLSTVSVCPIEEVAPVMNRPMWFQLYVLRDRGFMRNALERAQ 145 Query: 128 --------LNYDFGVQKAHQAVH---VLGADGLF-----------------LHLNPL--- 156 D V A + G + LH P Sbjct: 146 AAGCTTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYLQSVTHPQWAWDVGLHGRPHDLG 205 Query: 157 --QEII-QPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +P ++ + + + P+++K + L D Sbjct: 206 NISAYRGEPTNLQDYIGWLANNFDPSISWSDLEWIRDFWKGPMIIKGI---LDPDDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + + +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDLTIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A GG+R+G+D+L+ + LGA + FL A D V + KE V+M L G Sbjct: 305 ADGGVRSGLDVLRMLALGADTALIGRAFLYALATDGEAGVTNLLNLFEKEMRVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 + + E+ ++ + Sbjct: 365 RCIAEITRDSLV 376 >gi|156378150|ref|XP_001631007.1| predicted protein [Nematostella vectensis] gi|156218039|gb|EDO38944.1| predicted protein [Nematostella vectensis] Length = 355 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 64/348 (18%), Positives = 120/348 (34%), Gaps = 58/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N++ F L R L I VD LG +S P+ I+ + + Sbjct: 31 AGEEDTLKENRQAFKRIKLRPRMLRGI--SHVDLRTSVLGHPISMPVCIAPVA---VQKC 85 Query: 73 ERINRNLAIAAEKTK--VAMAVGSQR------VMFSDHNAIKSF-----ELRQYAPHTVL 119 + +A +AM + V + A+K F R V Sbjct: 86 AHPDGEIATVRAAAGQDIAMVLSMYGTSTFEEVTAASPQALKWFLIYILRDRHLFTSLVR 145 Query: 120 IS-NLG--AVQLNYDFGV------QKAHQAVHVL----GADGLFLHLNPLQEIIQPNGNT 166 + N G A+ LN D V ++ +A V+ L N EI++ + Sbjct: 146 RAENAGYQALVLNVDSPVVSGLVNRRCLKAGRVIGQPGDPSLALLEDNDDNEIVEHVIS- 204 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + S +P++LK + L+ D L ++ GI ++ GG + + Sbjct: 205 -----WESVDWVKSVTRLPVVLKGI---LTPEDARLAVEHGIDGIMVSNHGGRQLDGVLA 256 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + I + + GG+R G D+ K++ LGA + Sbjct: 257 SIEALPAISE-----------------AVQGKLEIFMDGGVRLGTDVFKALALGARAVFI 299 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 P + V + LR+E ++M L G + ++ + + Sbjct: 300 GRPVIWGLGYKGEAGVRKVLGLLREELRLAMILSGCGSLADITRSHVI 347 >gi|262377839|ref|ZP_06071054.1| L-lactate oxidase [Acinetobacter lwoffii SH145] gi|262307229|gb|EEY88377.1| L-lactate oxidase [Acinetobacter lwoffii SH145] Length = 381 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 126/378 (33%), Gaps = 80/378 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L E+ + G+ L+ P+ +S + TG + Sbjct: 29 AYAEYTLKRNVDDLSKIALRQRVL--NDMSELSLETQLFGENLALPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLI 120 E A+AA+K + + + + + LR + + + Sbjct: 87 RGEV---QAAVAADKKGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMKNALER 143 Query: 121 SNL---------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 + GA + G+ + A+ + H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGKNAAIRRYMQSCMHPHWAWNVGLLGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + + P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDYWEGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPSIASAVKGDIK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + +GA + L F+ V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLAMGADICMLGRAFVYALGAAGGSGVSNLLDLIEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIRHQ 337 G + + ++ + L++ + Sbjct: 363 GARTIADI-TSDCLVKLE 379 >gi|257452019|ref|ZP_05617318.1| FMN-dependent family dehydrogenase [Fusobacterium sp. 3_1_5R] gi|317058568|ref|ZP_07923053.1| dehydrogenase [Fusobacterium sp. 3_1_5R] gi|313684244|gb|EFS21079.1| dehydrogenase [Fusobacterium sp. 3_1_5R] Length = 340 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 119/330 (36%), Gaps = 40/330 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N + HL R L + + +++ G+ LS P+L + +TG Sbjct: 39 CGSGFSFQHNYTSLKNIHLKMRCLHK--AKDPKTTLQLFGQNLSMPILGAPITGPKFNFG 96 Query: 73 ERINR-----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 +N+ ++ + A+ T +G + IKS L++ G Sbjct: 97 GYVNQEEFCDDIILGAKATGTLAMIGDTGDPTAYEAGIKS--LKRANG-------FGIAI 147 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDV 184 + + + + A + + ++ + + L ++ ++ Sbjct: 148 IKPRYNEEIIKRIRIAEEAGAIAVGIDLDGAGLLTMKLFNQPVEPKSMEDLKELVNSTNL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K + LS D + +++G+ ++ GG S ++ DI Sbjct: 208 PFIVKGI---LSVEDAKACVEAGVDAIVVSNHGGRVLDDCISPVEVLQDI---------- 254 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 N+ + G +R+G D+LK + LGA + P + ++ + + + Sbjct: 255 -------VEAVGNQIIVLVDGNVRSGEDVLKYLALGARAVLIGRPCIWASVGNRQEGMET 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +SL+ + +M + G VQE+ NT Sbjct: 308 LFQSLQSQLYKAMLMTGNHSVQEISPNTIF 337 >gi|154250834|ref|YP_001411658.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Parvibaculum lavamentivorans DS-1] gi|154154784|gb|ABS62001.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Parvibaculum lavamentivorans DS-1] Length = 371 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 119/349 (34%), Gaps = 78/349 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N K F L++R L +++ +E G P++++ + + + + LA Sbjct: 50 ENLKAFARIRLVNRVLADLAGGH--TRLELFGCAFDHPVMVAPVA---FQKLAHPDGELA 104 Query: 81 --IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 AA K M V +Q M + A RQ A L L +Q + DF +Q Sbjct: 105 TVTAAGVLKAGMVVSAQASMDMEELA------RQAA--GPLWFQL-YIQPDRDFTLQLVR 155 Query: 139 QAVHVLGADGLFLHLN------------------PLQEIIQPNGNT-------------- 166 +A G L L ++ P E + Sbjct: 156 RA-EKAGYRALVLTVDAPVHGARNSEQRAGFSLPPDVEAVNLKAMRPLPPYMAGPGESAV 214 Query: 167 -------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + L++ ++P+LLK + L D +++G ++ GG Sbjct: 215 FASPLLAAAPGWKD-LNWLAAHTNLPILLKGI---LHPADAARAVEAGASGIVVSNHGGR 270 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + + + GI + GG+R G DI+K++ L Sbjct: 271 TLDTLPAAIEALP---------GI--------VEAVAGRVPVLMDGGVRRGTDIVKALAL 313 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GA + P + A + V + LR E V+M L G + + ++ Sbjct: 314 GAKAVLVGRPVIDGLAAAGAPGVAHVLHMLRAELEVAMVLTGCRTLADI 362 >gi|239816882|ref|YP_002945792.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Variovorax paradoxus S110] gi|239803459|gb|ACS20526.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Variovorax paradoxus S110] Length = 401 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 116/376 (30%), Gaps = 93/376 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ + LI L + S VD +E G++ P ++ + G + Sbjct: 29 AEDERCLQRNRDALEQLPLIPECLRDTST--VDIGIELFGRRWRAPFAVAPI-GLAGLVR 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + LA AA+ V + + + ++R AP L L + Sbjct: 86 PGADALLARAAQGAGVPFVLSTASNTRIE-------DVRAAAPDAALWMQL--YVMGERA 136 Query: 133 GVQKAHQAVHVLGADGLFLHLN-PLQEIIQPN---------------------------- 163 ++ + G + L L ++ P+ + + + Sbjct: 137 IAERIVRRARAAGFEALVLTVDVPVSGLRERDLRHGFRLPMRLTPATVLDMARHPAWLMR 196 Query: 164 ----GNTNFADLS---------------------------SKIALLSSAMDVPLLLKEVG 192 G FA+L +A L D PLL+K + Sbjct: 197 LARSGMPQFANLLPDDDGAPVSAQAQAALLSRTMDRRLTWESLAWLRKLWDGPLLVKGL- 255 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 L + D ++ G ++ GG + + M Sbjct: 256 --LGAEDARRAVRHGADGIVVSNHGGRQLDAAPASIAVLP-----------------AMV 296 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKE 311 + GG+R G D++K++ LGA L A ++ ++ L +E Sbjct: 297 DAAGGRIPVLMDGGIRRGSDVVKALALGARGVLAGRAPLYGLACGGEQGALSVLQLLAQE 356 Query: 312 FIVSMFLLGTKRVQEL 327 +M LLG R EL Sbjct: 357 IERTMTLLGATRAAEL 372 >gi|169596887|ref|XP_001791867.1| hypothetical protein SNOG_01213 [Phaeosphaeria nodorum SN15] gi|111069742|gb|EAT90862.1| hypothetical protein SNOG_01213 [Phaeosphaeria nodorum SN15] Length = 496 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 61/330 (18%), Positives = 110/330 (33%), Gaps = 72/330 (21%) Query: 45 DPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRNLAIAAEKTKV-------AMAVGS 94 D S F+G K+ P+ +S +M G+ I A A EK A Sbjct: 163 DTSTSFIGNKVKLPIYVSPAAMARLGHPDGEWGI----AQACEKYGAMQIISQNASMTPE 218 Query: 95 QRVMFSDHNAIKSFEL---RQYAPHTVLISNLGAVQ------LNYDFGVQKAHQAVHVLG 145 Q V + + + ++L + +++ + ++ L D V + Sbjct: 219 QIVADATPDQVFGWQLYVQNERHKSEAILARMNSLDPIKFICLTLDAPVPGKREHDERSK 278 Query: 146 ADGLFLHLN-PLQE--------------IIQPNGNTNFAD------LSSKIALLSSAMDV 184 L + +QE G + F + + L+ Sbjct: 279 NVASNLPVRAAVQEDQSVSKTSAEPKKPKSMGVGQSLFWGTAADLTWRTTLPWLAKHTHK 338 Query: 185 PLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P++LK + + D L ++ ++ GG + Sbjct: 339 PIVLKGIQ---THEDAYLASLYAPQVKAIILSNHGGRALDTAP----------------- 378 Query: 243 IPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 P +L R YC E + GG++ G D++K++ LGA G+ L Sbjct: 379 -PAVHTLLEIRKYCPEVFDRIEVWVDGGIKRGTDVVKALCLGARGVGVGRAALFGLGAGG 437 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V +E L+ E M LLG +RV++L Sbjct: 438 KEGVARVLEILKAETETCMRLLGVERVEDL 467 >gi|307154982|ref|YP_003890366.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cyanothece sp. PCC 7822] gi|306985210|gb|ADN17091.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cyanothece sp. PCC 7822] Length = 363 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 120/357 (33%), Gaps = 78/357 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ ++ + L R L + + D SV LG+ LS P+LI+ M + + Sbjct: 30 ALDQITLGDNRAAYERYRLRPRML--VDVSQRDLSVSILGQSLSRPILIAPMA---FQCL 84 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA + + M + + + A P + V + Sbjct: 85 AHPEGEIATARAATEAGMMMVLSTLSTQSLEEVAA------TGCPRWFQL----YVHKDR 134 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGN--------------- 165 +A +G L + ++ E P G Sbjct: 135 GLTKALVQRA-ESMGYQALCVTVDAPFIGRREADVRNEFTLPKGLKLANLLTMADVTLPD 193 Query: 166 -TNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + L + L S +P+++K + L + D L ++ G++ Sbjct: 194 VPDDSGLFAYFKEQIDPSLTWKDLEWLQSMTKLPVVVKGI---LRADDALLAVQHGVKGI 250 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG + D DI + + + GG+R G Sbjct: 251 IVSNHGGRQLDGAIASLDALQDITD-----------------AVGEQVEVLMDGGIRRGT 293 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DILK++ LGA + P L A+ V ++ L +E ++M L G R+ ++ Sbjct: 294 DILKALALGAKAVLVGRPILWGLAVGGQAGVSHVLQLLTEELELAMALSGCPRIGDI 350 >gi|71279242|ref|YP_268810.1| FMN-dependent dehydrogenase [Colwellia psychrerythraea 34H] gi|71144982|gb|AAZ25455.1| FMN-dependent dehydrogenase [Colwellia psychrerythraea 34H] Length = 381 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 123/372 (33%), Gaps = 78/372 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N FD + LI L +++ + G ++ P IS + G ++ Sbjct: 33 DEKALANNTSAFDRYQLIPNVL--RDVRDINIKSKVFGCEIEMPFYISPI--GQSRFFHP 88 Query: 75 ---INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---FEL-----RQYAP-------- 115 I A A KT ++ S + + A S F++ ++ Sbjct: 89 DSDIAGVKAAAKMKTLFTLSTFSGKPLEEVAQATTSDKAFQVYVLTDKEQNKRLLDRCKK 148 Query: 116 ----------HTVLISN-----LGAVQLNYDFGV----------QKAHQAVHVLGADGLF 150 T++ N + + + + + V G D Sbjct: 149 AGYKALVLTVDTIVAGNRERDLVNGLTIPPKLSLSSAVDFACKPRWVFNYVTDKGRDLAN 208 Query: 151 L-HLNPLQEIIQP----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 L + P+++ Q G + +K + +S D + ++ Sbjct: 209 LESVPPMKDTAQFLQYMKGLLEPNLTWQHAKDMIEYWGGKFAIKGI---ISVDDAKRAVE 265 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIAS 264 G I+ GG + D+ ++ R ++ + I Sbjct: 266 IGATSIIISNHGGRQLDSAPAPIDI------------------IQEIRAAVGDDIEIIVD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K+I LGA++ + ++ A V AI L+ E M LLG Sbjct: 308 GGIRRGSDIIKAIALGANVCSIGRAYVYGLAAGGQAGVEHAITLLKSEVERDMALLGCTE 367 Query: 324 VQELYLNTALIR 335 + +L N ++IR Sbjct: 368 LSQL--NPSMIR 377 >gi|119196201|ref|XP_001248704.1| hypothetical protein CIMG_02475 [Coccidioides immitis RS] Length = 492 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 117/351 (33%), Gaps = 78/351 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N + L R I + D S LG KL P+ +S +M L Sbjct: 143 NNSVYRSILLRPRVF--IDCKKCDLSTSILGYKLGSPIYVSPTAMA------------RL 188 Query: 80 AIAAEKTKVAMAVGSQRVM--FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A A + +A A M S++ ++ ++ + A + VQ + Sbjct: 189 AHPAGEAGIAAACSKFGTMQLISNNASMTPEQVVKDAKPNQIFGWQLYVQTDKSKSEAML 248 Query: 138 HQAVHVLGADGLFLHLNPL-------------------QEIIQPNGNTNFAD-------- 170 + + + L L+ E+++ +G T Sbjct: 249 ARIKKLKAIKFVCLTLDAPVPGKREDDERTKEPNNLSTAEMVKASGGTPVVGGSGIGKQL 308 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + L+ D+P++LK + + I ++ ++ GG + Sbjct: 309 FGGTDPSLTWKTTLPWLAKHTDLPIVLKGLQTHEDAY-IASLHTPQVKAIILSNHGGRAM 367 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSI 277 P +L R YC E + GG++ G D++K++ Sbjct: 368 DTAP------------------PAVHTLLEMRKYCPEVFDKLEVWVDGGIKRGTDVVKAL 409 Query: 278 ILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ P L + V ++ L +E +M LLG ++V++L Sbjct: 410 CLGAKAVGIGRPALFGLGAGGIEGVERVLQILNEETQTAMRLLGVEKVEDL 460 >gi|6478782|gb|AAF14000.1|AF203975_1 long-chain L-2-hydroxy acid oxidase [Homo sapiens] Length = 351 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 112/349 (32%), Gaps = 64/349 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N F L R L EVD G+++S + I+ TG + + Sbjct: 29 ADDSITRDDNIAAFKRIRLRPRYL--RDVSEVDTRTTIQGEEISALICIAP-TGYHCLVW 85 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA+ + + D + AP + L V + Sbjct: 86 PDGEMSTARAAQAAGICYITSTFASCSLED--------IVIAAPEGLRWFQL-YVHPDLQ 136 Query: 132 FGVQKAHQAVHVLGADGLFLHLN----------------------PLQEIIQPNGNTNF- 168 Q + V LG L + L+ LQ + N F Sbjct: 137 LNKQLIQR-VESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLTDLQSPKKGNAIPYFQ 195 Query: 169 ------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + ++ S +P++LK + L+ D EL +K ++ ++ GG Sbjct: 196 MTPISTSLCWNDLSWFQSITRLPIILKGI---LTKEDAELAVKHNVQGIIVSNHGGRQLD 252 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D +++ + + GG+R G D+LK++ Sbjct: 253 EVLASIDALTEV-----------------VAAVKGKIEVYLDGGVRTGNDVLKALAHEDK 295 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P L A V + L EF SM L G + V E+ N Sbjct: 296 CIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344 >gi|302893142|ref|XP_003045452.1| hypothetical protein NECHADRAFT_39199 [Nectria haematococca mpVI 77-13-4] gi|256726378|gb|EEU39739.1| hypothetical protein NECHADRAFT_39199 [Nectria haematococca mpVI 77-13-4] Length = 377 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 107/328 (32%), Gaps = 54/328 (16%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---NNKMI 72 + N + F + RAL +I+ LG S P IS G + + Sbjct: 75 EWSYRNNLEAFQRYTFRQRALTDITKVRNSLPTTILGHNFSAPFYISPAAQGIRCHPEAE 134 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 L A + V + L + P L +N D Sbjct: 135 SG----LVKGAAAGDILYIVCLFPLHAVKP-------LSNHHPALYLDNN--------DT 175 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL----------SSKIALLSSAM 182 + GA + ++ + + +P + L+S Sbjct: 176 NTKALLARSEKAGAAAIVFTVDAVADGNRPRRRRFESSFNPDEELSLFNWEYYDKLASLT 235 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D+P+++K + S D +L ++ + I+ GG + S Sbjct: 236 DLPVVVKGIN---SVQDTKLAVEHKVPAIIISNHGGRQVDGVSSA--------------- 277 Query: 243 IPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 I T L + A + + A GG+R G D++K + LG GL F+ + ++ V Sbjct: 278 IETALEIHNEAPEVFKQTEVWADGGVRYGTDVIKLLALGVKAIGLGRSFMYSNVYGAEGV 337 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYL 329 AI+ L+ E + LG + +L Sbjct: 338 ERAIDILKYEIAIDAANLG---ISDLKK 362 >gi|328855016|gb|EGG04145.1| hypothetical protein MELLADRAFT_117162 [Melampsora larici-populina 98AG31] Length = 449 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 105/334 (31%), Gaps = 43/334 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ ++RN+ ++ R L +S + S S P I+ + Sbjct: 133 ANQEITVNRNQSDWNLIKFRPRVLRNVSTSNLKLSTHLCNFTSSLPFFIAPAALAKLAHL 192 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + +N A K + V S + A P VL L V + Sbjct: 193 DG-EKNFVRVAAKFGIIYIVSSNASCTLEELAE------CKEPGQVLFYQL-YVNKDRSK 244 Query: 133 GVQKAHQAVHVLGADGLFLHLN---PLQEIIQPNGNTNFAD----------------LSS 173 + + + + L ++ P + Sbjct: 245 TKELIKR-IEKADYKAIVLTVDAPIPGKRTRDERLKVRIGGEQSVSSALASYIDSSLTWE 303 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + +P+++K + +S DI + +Y ++ GG S + + Sbjct: 304 DASAIQKMTHLPIIIKGIQ---TSSDILKSISMNFKYIYLSNHGGRQLDSTSSSIETLIE 360 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 ++ + L + + GG+R G D++K++ LG GL L Sbjct: 361 FKTLYPN--------LIEV----SGTEVWLDGGIRGGNDVVKALALGVKAVGLGRLPLYS 408 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V + LR+E + + LLG + EL Sbjct: 409 LIWGEKGVEKVCKILREEIEICLRLLGVIDIHEL 442 >gi|303257791|ref|ZP_07343801.1| dehydrogenase, FMN-dependent family [Burkholderiales bacterium 1_1_47] gi|302859394|gb|EFL82475.1| dehydrogenase, FMN-dependent family [Burkholderiales bacterium 1_1_47] Length = 404 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 108/325 (33%), Gaps = 30/325 (9%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 G N L R + + D S++F G K+S P++ + G M + Sbjct: 100 ASRGFQANYDSLAAVQLNSRVVHGVHV--PDTSIDFFGTKISMPVIAAPTGGTTYNMGGK 157 Query: 75 INRN--LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + + A +G+ D + L+ H + ++ Sbjct: 158 LTEEEFVNAICGGCNKAGTLGAVADGIGDPLPVYEKRLQTLKEHGYKA--IVGLKPRLQK 215 Query: 133 GVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + + + G L + L+ + G T ++ L A +PLL K + Sbjct: 216 DIIERMRLAEEAGIIALTIDLDSAGRAARATKGQTVEPKTFEQLKELVKASKLPLLFKGI 275 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-E 250 ++ + EL + +G ++ GG + + T L Sbjct: 276 ---MTPDEAELCINAGAAGIVVSNHGGRTLADTPG------------------TAAVLPR 314 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLR 309 + + G L G D+ K + +GA F++ A +D V ++ Sbjct: 315 IVDKVNGRCFVMVDGTLARGTDVEKYVAIGADCTLAGRHFVRAAHGGLADGVALFANKMK 374 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 E V+M L G + V+++ + +I Sbjct: 375 NELAVAMVLTGAQTVKDINRSMVVI 399 >gi|302884469|ref|XP_003041130.1| hypothetical protein NECHADRAFT_97036 [Nectria haematococca mpVI 77-13-4] gi|256722027|gb|EEU35417.1| hypothetical protein NECHADRAFT_97036 [Nectria haematococca mpVI 77-13-4] Length = 383 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 107/326 (32%), Gaps = 39/326 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ + + +++ E LG S P IS G + Sbjct: 72 AAGEWSYRNNMEVFNRYTFNPSVMNDVTNIEESLPTTILGHNFSAPFYISPCASG---IY 128 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 N L A + + + + S S A V+ L Sbjct: 129 GHPNAELNFVKGAAEGNI-LYIPSGYATLSIEQI-----HAAKAKGQVVFQQLYLTS--N 180 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA---------LLSSA 181 D Q GAD L ++ + LSS L + Sbjct: 181 DTETQDLFDRSKKAGADALVFTVDAPTFGTRQRAARLDVSLSSSTYRYITWDYYKKLQTM 240 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 D+P+++K + +S D +L +K + ++ GG S ++ DI Sbjct: 241 TDLPIIVKGI---MSVRDAKLAVKHKVPAIVLSNHGGRQLDGAPSALEVALDIYKK---- 293 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 A + + A GG+R G +LK + LG G+ PF+ + + V Sbjct: 294 ----------APEVFEKTEVFADGGVRYGTHVLKLLALGVKAVGVGRPFMYSNIFGQEGV 343 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQEL 327 IE L++E V LG ++E+ Sbjct: 344 ERTIELLKREIAVDGANLGLGSLKEI 369 >gi|195028666|ref|XP_001987197.1| GH21787 [Drosophila grimshawi] gi|193903197|gb|EDW02064.1| GH21787 [Drosophila grimshawi] Length = 366 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 116/334 (34%), Gaps = 64/334 (19%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 ++D S E LG+ L++PL I+ + + + + A AA K + + Sbjct: 54 DVSKLDASCEILGEHLNWPLGIAPTA---MQKLAHPDGEIGSARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 D + K F L Y + +N A+ L D + +A Sbjct: 111 TSLEDVAAAAPDTCKWFRLYIYRDRCLTEQLVRRAERANFKALVLTVDTPINGDRRA-DA 169 Query: 144 LGADGLFLHL-------------------NPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 L HL + L E + N + + + + L + Sbjct: 170 RNHLSLPSHLTLANFKAECTQGFVSKCGGSGLNEYVACNYDPSISW--QDVKWLQQLTHL 227 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LK + LSS D L G ++ GG + ++ +I Sbjct: 228 PIVLKGI---LSSEDALLARDIGCAGLIVSNHGGRQLDTTPASIEVLPEI---------- 274 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVA 303 + + GG+ G+DI K++ LGA + P L A + V Sbjct: 275 -------VAAVGKDMVVMMDGGIMQGIDIFKALALGAQTVFIGRPTLWGLAANGQRGVEQ 327 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + L+++F V+M L G + ++ A++ H+ Sbjct: 328 LLTILKRDFEVTMTLTGCPTLADIR--PAMVVHE 359 >gi|209546547|ref|YP_002278465.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537791|gb|ACI57725.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 395 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 110/372 (29%), Gaps = 79/372 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N F + R L + G+ + P I+ M G + M R Sbjct: 47 NASLRNNLDAFQAYAFRPRILQ--DVSKRSTETTLFGQTFTAPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAM-AVGSQRVMFS-----------------DHNAIK----------- 106 + LA A + + M GS + + I Sbjct: 104 DIVLAAGAAQVGIPMIMSGSSLIRLEEVVAAAPATWFQAYLPGEPERIDALVDRVAAAGF 163 Query: 107 ----------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + R+ + L GV + + H P Sbjct: 164 GTLLLTVDTATLPNRENNIRAGFSTPLRPSLALAWQGVSHPQWTIGTF-LRTIARHGIPH 222 Query: 157 QE---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 E II N +F S + + + + L++K + L D Sbjct: 223 FENSYATRGAPIIASNVTRDFGRRDHLNWSHLERIRNRWNGKLIVKGI---LHPDDAARA 279 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++G ++ GG I +L E+ + + Sbjct: 280 AETGADGVIVSNHGGRQLDGA------------------ISPLAALPEIVERLGDRIPIM 321 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG Sbjct: 322 IDGGFRRGTDIIKALALGARFVFVGRPFLYAAAVAGLPGVLRAADILKSELHSNMALLGV 381 Query: 322 KRVQELYLNTAL 333 ++++ + Sbjct: 382 TTIEQISRGHLV 393 >gi|299134430|ref|ZP_07027623.1| L-lactate dehydrogenase (cytochrome) [Afipia sp. 1NLS2] gi|298591177|gb|EFI51379.1| L-lactate dehydrogenase (cytochrome) [Afipia sp. 1NLS2] Length = 381 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 65/380 (17%), Positives = 117/380 (30%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------ 66 + RN + F+D L+ L E+D SV +G+KL+ P S Sbjct: 32 ADDECSQRRNSRSFEDCDLVPNVLRG--VREIDLSVTVMGQKLATPFYCSPTALQRLFHY 89 Query: 67 ----------------------GNNKMIER-------------------INRNLAIAAEK 85 G + E +NR + A++ Sbjct: 90 QGERAVAAAAAKLGTLFGVSSLGTVSLEELRKTHDTPQIYQFYFHRDRGLNRAMMQRAKE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQ-----LNYDFGVQK 136 V + V S + + F + + P +L + + + F + + Sbjct: 150 AGVEVMMLTVDSITGGNRERDLRTGFSIPFRLTPAGILQFAIKPMWGLQYVTHERFKLPQ 209 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 V + G +++ P+ N +A + + + P LK + +S Sbjct: 210 LEDHVDMSGGAMSI--GRYFTDMLDPSMN------WDDVAEMVQSWNGPFCLKGI---IS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D G ++ GG + D +++ Sbjct: 259 VEDARRAADIGCAGIILSNHGGRQLDGSRAPFDHLAEV-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G ILK++ LGA GL +L P A V A+ LR E Sbjct: 302 DRIDVMMDGGIQRGTHILKALSLGAKAVGLGRYYLYPLAAAGQPGVERALGLLRTELERD 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G + +L R Sbjct: 362 MKLMGCTSISQLSRENLRFR 381 >gi|331700402|ref|YP_004397361.1| (S)-2-hydroxy-acid oxidase [Lactobacillus buchneri NRRL B-30929] gi|329127745|gb|AEB72298.1| (S)-2-hydroxy-acid oxidase [Lactobacillus buchneri NRRL B-30929] Length = 369 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 109/343 (31%), Gaps = 47/343 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N+K F ++ RAL I + G L P++++ G Sbjct: 46 NNWTLKANRKAFTHKQIVPRALSNI--ENPSLDTNVFGIPLKTPIMMAPTAAQGLAHSQG 103 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------------FELRQYAPH 116 + +AA +A + S V SD A + + L A Sbjct: 104 EKDTAKGVAAVGGLMAQSTYS-SVSISDTAAAGNGAPQFFQLYMSKDWDFNYSLLDEAKK 162 Query: 117 TVLISNLGAVQLNYDFGVQK-----AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + V D + + + + I + Sbjct: 163 AGVKGIILTVDATVDGYREDDIKNNFQFPIPMANLTKFSEGDGKGKGIAEIYAAAAQKIG 222 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + ++ D+P+++K + S D + +G ++ GG + + D+ Sbjct: 223 PDDVKKIADYTDLPVIVKGIE---SPEDALYAIGAGAAGVYVSNHGGRQLNGGPASFDVL 279 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 D+ A+ I G+R G D K++ GA L + P + Sbjct: 280 EDV-----------------AKAVNGRVPIIFDSGVRRGSDAFKALASGADLVAMGRPVI 322 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ ++ V A E L E +M L GTK + ++ L Sbjct: 323 YGLALGGAEGVQAVFEHLGDELKTTMQLAGTKTIADVKKTHLL 365 >gi|160915376|ref|ZP_02077588.1| hypothetical protein EUBDOL_01384 [Eubacterium dolichum DSM 3991] gi|158432767|gb|EDP11056.1| hypothetical protein EUBDOL_01384 [Eubacterium dolichum DSM 3991] Length = 340 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 114/322 (35%), Gaps = 36/322 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN + + E E+ +F G ++S P+ + ++G ++ +L Sbjct: 47 RNIDMLKQVFITMDTISEN--TEISTQTDFFGHEVSLPVYAAPISGIRLNYGADLD-DLT 103 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG----AVQLNYDFGVQK 136 E + +A GS D + F P ++ + G ++ + ++ Sbjct: 104 YTQELVEGCLAAGSL-AFSGDGMYDEMF----CGPMDIIAKHQGYGIPTIKPWSESDMEW 158 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--SSKIALLSSAMDVPLLLKEVGCG 194 + A + ++ + + ++ + ++P++LK + Sbjct: 159 RIKLAKEGKALAIASDIDA-SGLTNLRNSVTPVGFKNVEELKKIKKMAEMPVILKGI--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS L++G+ ++ GG S ++ DI + Sbjct: 215 LSVKGARKALEAGVDGIIVSNHGGRVLDDCLSGIEVLEDI-----------------VKA 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFI 313 + GG R+G D+ K++ LGA + P + D ++ V +E ++ E Sbjct: 258 VDGRMKIFVDGGFRSGNDVFKALALGADGVLIGRPISHAVIGDGANGVKLYLEKIQLELK 317 Query: 314 VSMFLLGTKRVQELYLNTALIR 335 +M + G K ++++ ++ Sbjct: 318 EAMAMAGCKTIKDIQREHVCVK 339 >gi|332654022|ref|ZP_08419766.1| dehydrogenase, FMN-dependent family [Ruminococcaceae bacterium D16] gi|332517108|gb|EGJ46713.1| dehydrogenase, FMN-dependent family [Ruminococcaceae bacterium D16] Length = 339 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 111/320 (34%), Gaps = 48/320 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 RN + + + L + E VD F G++ P+ + N ++ N Sbjct: 47 RNYQAWQEICLNMDTICENGP--VDTKFNFFGQEYDLPVFAGPVGAVNLHYGDKYNDLEY 104 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 L A + +A G D + F A + V+ + Sbjct: 105 NNILVPACAQAGIAAFTG-------DGTNPEVFTAAAAAIGANGGKGIPTVKPWDRDTLY 157 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 A GA + ++ L+ + P G+ A+L + + VP ++K Sbjct: 158 AKLDAAKASGAKVFAMDIDAAGLPFLKGLNPPAGSKTVAEL----REIIEYVKVPFIIKG 213 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ + L++G ++ GG G+P S+ Sbjct: 214 I---MTVKGAQKALEAGAAGIVVSNHGGRVQD-------------------GVPATASVL 251 Query: 251 --MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 +A+ + + GG+R GVD+ K++ LGA LA P++ + V + Sbjct: 252 PAIAQAVKGQMVVLVDGGIRTGVDVCKALALGADACILARPYVTAVYGGQAEGVKVLTDK 311 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 L+ E +M + G + E+ Sbjct: 312 LKGELQDTMAMCGVHSLSEI 331 >gi|154502810|ref|ZP_02039870.1| hypothetical protein RUMGNA_00624 [Ruminococcus gnavus ATCC 29149] gi|153796693|gb|EDN79113.1| hypothetical protein RUMGNA_00624 [Ruminococcus gnavus ATCC 29149] Length = 337 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 111/320 (34%), Gaps = 48/320 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNKMIERI 75 RN + + + + + E D +V GK+ S+P + G + Sbjct: 47 RNFQKWQEIRINMDTICEKKPA--DTTVTLFGKEFSYPFFAGPVGAVKLHYGEKYTDQEY 104 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL-NYDFG- 133 N L + +A G A + + LG + +D Sbjct: 105 NEILLAGCMEGGIAAFTGDGSDARVMQEATAA---------VQKLGGLGIPTVKPWDMDT 155 Query: 134 VQKAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 ++ + V GA + + ++ LQ + P G+ + ++ + ++P +L Sbjct: 156 IRDKMELVKRSGAFAVAMDIDAAGLPFLQNLNPPAGSKS----VEELKEIVKIAEIPFIL 211 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ + L++G + ++ GG + S ++ DI Sbjct: 212 KGI---MTVRGAKKALEAGAQAIVVSNHGGRVLDQCPSTAEVLPDI-------------- 254 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIES 307 + + GG+R G D+ K++ +GA +A PF+ A V A Sbjct: 255 ---VKAVDGRMKIFVDGGIRTGTDVFKALAMGADAALIARPFVTAAYGAGVQGVSAYTAK 311 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 E +M + G V+E+ Sbjct: 312 TGGELRDTMAMCGAFAVKEI 331 >gi|254520994|ref|ZP_05133049.1| L-lactate dehydrogenase [Stenotrophomonas sp. SKA14] gi|219718585|gb|EED37110.1| L-lactate dehydrogenase [Stenotrophomonas sp. SKA14] Length = 379 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 121/376 (32%), Gaps = 83/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ E G+KL+ P+ ++ + TG + Sbjct: 29 AYAEHTLKRNVSDLSDIALRQRIL--RNMSDLSLETELFGEKLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN----------- 163 Q D V A + G + + Q I P+ Sbjct: 144 AQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRI--GQAITHPHWAWDVGLLGRP 201 Query: 164 --------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G ++ + + P+L+K + L D Sbjct: 202 HDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMLIKGI---LDPDD 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG + + T +L +A + Sbjct: 259 ARDAVKFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVQGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 + +A G+R G+D+++ + LGA L F+ A V ++ + KE V+M Sbjct: 301 LKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTAL 333 L G +R+ ++ ++ + Sbjct: 361 LTGARRIADIGRDSLV 376 >gi|146305839|ref|YP_001186304.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas mendocina ymp] gi|145574040|gb|ABP83572.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas mendocina ymp] Length = 389 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 123/346 (35%), Gaps = 56/346 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ L R L ++S + G+ + P+ ++ + + + Sbjct: 58 AADELSLADNRAAFERLRLRGRVLQDLSGGN--TRLRLFGQDFAHPVFLAPVA---YQKL 112 Query: 73 ERINRNLAI--AAEKTKVAMAVGSQ-RVMFS----DHNAIKSFEL-----RQYAPHTVLI 120 + LA AA M V +Q V A F+L R++ + Sbjct: 113 AHPDGELASVLAASALGAGMVVSTQASVELEAIAAQAQAPLWFQLYIQPDREFTAALIRR 172 Query: 121 SNLGAVQ---LNYDFGVQKA----HQAVHVLGADGLFLHLN---PLQEIIQPNG------ 164 + Q L D V +A L A ++L PLQ +P+ Sbjct: 173 AESAGYQALVLTVDAPVNGVRNREQRAGFALPAGVEAVNLRGMRPLQAQAEPHNGSLLLG 232 Query: 165 --NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 A + + L +P+LLK + +S D E L +G+ ++ GG + Sbjct: 233 GPLLAAAPTWADLTWLREQTRLPILLKGI---MSGADAEQALTAGMDGLIVSNHGGRTLD 289 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D+ ++ + GG+R G DILK++ LGA Sbjct: 290 GLPATIDVLPEVAA-----------------AVQGRVPLLLDGGIRRGSDILKALALGAD 332 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P++ A + V ++ LR E V+M L G + + Sbjct: 333 AVLVGRPYVFALATAGAIGVAHVLQLLRAELEVAMALTGCADLASI 378 >gi|257466180|ref|ZP_05630491.1| FMN-dependent family dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|315917338|ref|ZP_07913578.1| dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|313691213|gb|EFS28048.1| dehydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 340 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 119/330 (36%), Gaps = 40/330 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N + HL R L + + +++ G+ LS P+L + +TG Sbjct: 39 CGSGFSFQHNYTSLKNIHLQMRCLHK--AKDPKTTLQLFGQNLSMPILGAPITGPKFNFG 96 Query: 73 ERINR-----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 +N+ ++ + A+ T +G + IKS L++ G Sbjct: 97 GYVNQEEFCDDIILGAKATGTLAMIGDTGDPTAYEAGIKS--LKKANG-------FGIAI 147 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDV 184 + + + + A + + ++ + + L ++ ++ Sbjct: 148 IKPRYNEEIIKRIRIAEEAGAIAVGIDLDGAGLLTMKLFNQPVEPKSMEDLKELVNSTNL 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P ++K + LS D + +++GI ++ GG S ++ DI Sbjct: 208 PFIVKGI---LSVEDAKACVEAGIDAIVVSNHGGRVLDDCISPVEVLQDI---------- 254 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVA 303 N+ + G +R+G D+LK + LGA + P + ++ + + + Sbjct: 255 -------VEAVGNQIIVLVDGNVRSGEDVLKYLALGARAVLIGRPCIWASVGNRQEGMET 307 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 +SL+ + +M + G VQE+ NT Sbjct: 308 LFQSLQSQLYKAMLMTGNHSVQEISPNTIF 337 >gi|212538635|ref|XP_002149473.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] gi|210069215|gb|EEA23306.1| cytochrome B2, putative [Penicillium marneffei ATCC 18224] Length = 394 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 115/332 (34%), Gaps = 59/332 (17%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGG---NNKMIERINRNLAIAAEKTKV------- 88 + + D S + +G+ P+ IS M + I + A + + Sbjct: 74 VDVGKCDLSTQIMGQLSGLPIFISPMAMARRFHPAGEAGITQ----ACRELGIMHIISNN 129 Query: 89 AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----LGAVQLNYDFGVQKAHQ 139 A + V + + F+L R+ + + N + + L D V H+ Sbjct: 130 ASMTPEEIVD-AGPDQSHGFQLYVQQDRKESEVVLERINKLKAIKCLVLTLDEPVPGKHE 188 Query: 140 AVHV----LGADGLFLHLNPLQEIIQP-NGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 A+ + + L+ + +G + ++ ++P++LK V Sbjct: 189 LGGKEGGRREAEDKIENTSRLKPAVASISGPAYDLTWKDTLEWVTQHTELPIVLKGVQ-- 246 Query: 195 LSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 + D + + ++ ++ G P+ +L R Sbjct: 247 -THEDAYIASQFPQVKSIILSNHAGRVLDTAP------------------PSIYTLLEIR 287 Query: 254 PYCNE----AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESL 308 YC E + GG+R G D++K+I LGA G+ F V IE + Sbjct: 288 KYCPEVFDKVDVLVDGGIRRGTDVVKAICLGAKGVGIGRSVFWGLGAGGVRGVERTIEIM 347 Query: 309 RKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 E M LLG + V +L ++NT++I Q Sbjct: 348 ADEIRTCMRLLGVRNVADLGLQHVNTSIIEQQ 379 >gi|72045880|ref|XP_789077.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961737|ref|XP_001190323.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 378 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 121/375 (32%), Gaps = 86/375 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 ++ + + + + L + L + D S LG ++SFP IS Sbjct: 32 ADEEVTLRDSHAAYLRYRLRPKVL--RDVSKRDLSTTILGHRVSFPCGISPTAFHKGAHP 89 Query: 66 -----------------------------------GGNNKMIE------RINRNLAIAAE 84 GG M +I L AE Sbjct: 90 DGEIATARAAAAAGVFMSLSCGANVTIEDIADSAPGGLRMMQTYIYKNPKITELLLRRAE 149 Query: 85 KTKV-AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 K A+ V ++ K F+L + L +N + ++A QA Sbjct: 150 KAGFKALLVTVDVAVYGYRRNEKEFDLYETVRTNPAYHQLK--WVNMEMMKEEADQARAA 207 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +PL + + A I L +P+++K + L+ Sbjct: 208 ---------GDPL--LWDLADTIDDAPTWDDIRWLKKISSIPVIVKGI---LTGEMAREA 253 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G+ ++ GG + D ++ +D + Sbjct: 254 AAAGVDGIMVSAHGGRQLDTSIAPLDALPEVVEAVRD----------------TNIEVYV 297 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DI+K++ LGA + P + A + + ++ L+ EF +M L G Sbjct: 298 DGGVRTGTDIIKALALGARAAFIGRPAIYGIACGGEEGLTDLLDILKDEFSRAMALSGCA 357 Query: 323 RVQELYLNTALIRHQ 337 RV+++ + +L+ H+ Sbjct: 358 RVEDI--DRSLVNHR 370 >gi|126650970|ref|ZP_01723181.1| lactate 2-monooxygenase [Bacillus sp. B14905] gi|126592171|gb|EAZ86220.1| lactate 2-monooxygenase [Bacillus sp. B14905] Length = 387 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 112/357 (31%), Gaps = 67/357 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + + N+ F+ + ++ R L V ++ GK PLL + M G ++ E Sbjct: 51 EQTLRNNRSAFEKYSIVPRFL--NDVSNVHTTINLFGKTYPTPLLFAPVGMNGMVHEEGE 108 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFELRQYAPHTVLISNLGAVQ 127 AA++ + + D +A K F+L + Sbjct: 109 L---AAVRAAQQLNMPYIQSTVSTYALEDVAEAAPSATKWFQLYWSTNEEIAF---SMAA 162 Query: 128 LNYDFGVQKAHQAVHVL---------------------------GADGLF-LHLNPLQEI 159 G + V + + L + + Sbjct: 163 RAESAGFEAIVLTVDTVMLGWREEDVRNQFSPLKLGYAKGNYINDPVFMASLPNDSFESY 222 Query: 160 IQPNGNTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 +Q F + L ++P+LLK + L D +L L++GI ++ G Sbjct: 223 VQGVLQNVFHPTLNWEHVRELKRRTNLPILLKGI---LHPEDAKLALENGIDGIIVSNHG 279 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D I + I G+ G+D LK++ Sbjct: 280 GRQLDGVIGSLDALPPI-----------------VSAVNGQIPIILDSGVYRGMDALKAL 322 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + PF+ A++ + ++ E VS+ L GT V+ L T + Sbjct: 323 ALGADAVAIGRPFVYGLALEGQQGAEKVMTNIYDELKVSIALAGTTSVEGLRTITLV 379 >gi|85089526|ref|XP_957990.1| hypothetical protein NCU07362 [Neurospora crassa OR74A] gi|28919290|gb|EAA28754.1| hypothetical protein NCU07362 [Neurospora crassa OR74A] Length = 520 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 114/357 (31%), Gaps = 81/357 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + F D L R I + D S LG K+ PL +S + R+ Sbjct: 162 HNTRAFRDILLRPRVF--IDCTKADTSTTLLGHKVGTPLYVSP------AALARLAHPDG 213 Query: 81 IAAEKTKV------------AMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNL-- 123 A + A Q V + A+ ++L + +++ + Sbjct: 214 EAGIAKGISSFGAMQLVSNNASMTPEQIVAEAIPGAVFGWQLYVQTTRSKSEAMLARINK 273 Query: 124 -----------------GAVQLNYDFGVQKAHQAVH-----VLGADGLFLHLNPLQEIIQ 161 G + + ++ A + V A+ Q++ Sbjct: 274 LRDHFKCIVLTLDAPHPGKREHDEKSNLEAAGEFVESASNAKTDAEKKPGGGGVGQQLFW 333 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG------IRYFDIAG 215 G + + LS D+P++LK + + D L + ++ ++ Sbjct: 334 --GTAADLTWETTLPWLSKHTDLPIVLKGIQ---THEDAYLAAQYARKHPGTVKAIILSN 388 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGV 271 GG + P +L R YC E + GG++ G Sbjct: 389 HGGRALDTAP------------------PAVHTLLEIRKYCPEVFGAVEVWIDGGVKRGT 430 Query: 272 DILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D++K++ LGA G+ L V + L++E I M LLG K V +L Sbjct: 431 DVVKALCLGAKAVGVGRAALWGLGAGGWQGVERTFDILQQEIITCMKLLGAKTVNDL 487 >gi|323445312|gb|EGB01986.1| hypothetical protein AURANDRAFT_35605 [Aureococcus anophagefferens] Length = 336 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 111/310 (35%), Gaps = 59/310 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 C + N+ F + R L + VD + + LG + PL +S +M G ++ Sbjct: 53 ACDELTYQENELAFKRIWMRPRVL--VDVKTVDLTSKILGATVGAPLFLSACAMCGMGHE 110 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E A +A + S + F +Q +P + + V + Sbjct: 111 DGEL---AWAESAAGLDIPFM----SPNLSSKSRSAIFAAQQASPTGHRMFQI-YVNPDR 162 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------------------QE-------IIQ 161 D +++ +A G + + ++ QE + Sbjct: 163 DVVLEQ-LRACEAAGVTAVCVTVDSAVAGPRERDQRNKIAMLLKQQAQQESAAKGAKARK 221 Query: 162 PN--GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 P N + A +A S +P++LK V CG D L K+G+ ++ GG Sbjct: 222 PGVYANRDPALNWKDVAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGR 278 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + S + +I + + G+ ++ + GG+R G D++K++ L Sbjct: 279 NMDTARSSIEALPEIISMLTEAGL------------RSKLEVWLDGGIRRGSDVVKALAL 326 Query: 280 GASLGGLASP 289 GA+ G+ P Sbjct: 327 GANACGIGKP 336 >gi|302413039|ref|XP_003004352.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261356928|gb|EEY19356.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 383 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 116/322 (36%), Gaps = 37/322 (11%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIER 74 + N + F + R + ++S + LG S P I+ G Sbjct: 75 EWSYRNNLEVFQRYTFKPRVMRDVSRLPESLATTILGHNFSAPFFIAPCARGAFGHPDAE 134 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 +N L A + + + S + S + S + Q VL L + Sbjct: 135 LN--LVRGAADEDI-LYIPSLQATMSMEDIAASKDDGQ-----VLFQQLYLP--PGEDNT 184 Query: 135 QKAHQAVHVLGADGLFLHLNPL-----QEIIQPNGNTNFADLSSKI----ALLSSAMDVP 185 +K + GA + ++ Q + G T + + + + +P Sbjct: 185 KKLLRRTEATGAKAIVFTVDAPANGDRQRAYRQRGRTPEPEFQAITWEYYRKIRNMTSLP 244 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++LK + ++ D + + +G+R ++ GG S ++ DI Sbjct: 245 IVLKGI---MTVEDAQAAVSNGVRAIILSNHGGRQLDGSPSSLEVALDIHK--------- 292 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 +A + + A GG+R G D+LK + LG G+ PF+ D V+ AI Sbjct: 293 -----VAPEIFKQIEVYADGGVRYGTDVLKLLALGVRAVGVGRPFMYANSYGYDGVLQAI 347 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 + L+++ V LG +++L Sbjct: 348 QMLKRQISVDAANLGVTDLKKL 369 >gi|13473966|ref|NP_105534.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Mesorhizobium loti MAFF303099] gi|14024717|dbj|BAB51320.1| glycolate oxidase (S)-2-hydroxy-acid oxidase, peroxisomal [Mesorhizobium loti MAFF303099] Length = 352 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 117/340 (34%), Gaps = 65/340 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ FD L R L +D ++ G++L+ P++++ + ++ Sbjct: 44 NEAAFDRIRLRQRVL--RDVTRLDTAITLFGQRLTHPIILAPIA--YQRLAHP--EGEVA 97 Query: 82 AAEKTKVAMAVG----SQRVMFSDHNAIKSFEL---------RQYAPH-TVLISNLGAVQ 127 A VA AV + D A + R + ++ LGA Sbjct: 98 TARGAGVAEAVFILGTTATAAIEDCVAESQSPVWFLLYWQSDRGFNGELVSRMAALGAKA 157 Query: 128 LNYDFGVQKAHQAVHVLGA-----DGLF-----------LHLNPLQEIIQPNGNTNFADL 171 ++ + A D L L + Q+ P Sbjct: 158 ISVTVDLPTPGDRRRQFRAGFKIPDSLATPYFKDRNTGVLKVGTAQKRAMP--------T 209 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + IA L S +PL+LK + L D E + +G ++ G + + + D Sbjct: 210 WADIAWLRSLTTLPLILKGI---LDPDDAEQAIGTGADAIVVSNHGSRNLDTLPAAIDAL 266 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I I GG+R G D+LK+I LGAS + P++ Sbjct: 267 PAIAE-----------------RVAGRIPIILDGGVRRGTDVLKAIALGASAVMIGRPYV 309 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A ++ V + LR++F ++M L G R+ E+ + Sbjct: 310 YALATAGAEGVAHCVNLLRRDFEMAMALTGRARLGEIDRS 349 >gi|317376213|sp|Q01KC2|GLO2_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 2; Short=GOX 2; Short=OsGLO2; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 gi|317376216|sp|Q7XPR4|GLO2_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2; AltName: Full=Glycolate oxidase 2; Short=GOX 2; Short=OsGLO2; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO2 Length = 368 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 115/373 (30%), Gaps = 98/373 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N + F L + +D S+ LG +S P++I+ Sbjct: 30 AEDQWTLRENSEAFSRILFQPVVL--VDVSCIDMSMSVLGYNISMPIMIAPTALHKLAHP 87 Query: 64 ----------------MTGGNNKMI--ERIN--------------------RNLAIAAEK 85 MT + E +N + L AEK Sbjct: 88 EGELATARAAAAAETIMTLSSWSSCSIEEVNLAGPGVRFFQLSIYKDRNLVQQLIQRAEK 147 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V + + + + F L Q V L G+ + + Sbjct: 148 AGYKAIVLTVDAPWLGRREADVKNRFTLPQN------------VMLKIFEGLDQGK--ID 193 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + +F+ I L + +P+L+K + +++ D + Sbjct: 194 ETNGSGLA-------AYVASQIDRSFSW--KDIKWLQTVTSLPVLVKGI---ITAQDTRI 241 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 ++ G ++ GG + + T LE R Sbjct: 242 AIEYGAAGIIMSNHGGRQLDYLPA------------------TISCLEEVVREANGRVPV 283 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 G R G D+ K++ LGAS + P L A+D V A+ LR E ++M L G Sbjct: 284 FIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLRDELEITMALSG 343 Query: 321 TKRVQELYLNTAL 333 V+E+ + Sbjct: 344 CTSVKEITRGHVV 356 >gi|284048834|ref|YP_003399173.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidaminococcus fermentans DSM 20731] gi|283953055|gb|ADB47858.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidaminococcus fermentans DSM 20731] Length = 337 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 108/319 (33%), Gaps = 46/319 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR--- 77 RN + D ++ L E VD S+E G+ +P+ + ++ N Sbjct: 46 RNYAKWQDIRVVMDTLCE--KRPVDTSIELFGRTFKYPIFAGPVGAVAMHYSDKYNDVTY 103 Query: 78 --NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 L +A G D ++ A V + + + Sbjct: 104 NAELVPGCADAGIAAFTGDGM----DPQVMQGATDAIKACGGVGVPTVKPWNAQM---IA 156 Query: 136 KAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + V GA + + ++ L+ + P G+ + ++ + +P ++K Sbjct: 157 EKMELVKQSGAFAVAMDVDAAGLPFLKNFVPPAGSKS----VDEMKAIIKEAGLPFIIKG 212 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + +S ++G ++ GG + + T LE Sbjct: 213 I---MSVKGALKAREAGASAIVVSNHGGRVLDQSPA------------------TAEVLE 251 Query: 251 M-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 A + + GG+R+GVD+ K++ LGA +A PF+ + + L Sbjct: 252 EIAVAVGGTMKILVDGGIRSGVDVFKALALGADAVLIARPFVNAVYGGGREGARLLADKL 311 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E +M + G ++++ Sbjct: 312 GAELADTMEMCGAASLKDI 330 >gi|195382687|ref|XP_002050061.1| GJ21929 [Drosophila virilis] gi|194144858|gb|EDW61254.1| GJ21929 [Drosophila virilis] Length = 366 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 112/328 (34%), Gaps = 58/328 (17%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGS-QR 96 +++ S LG + PL I+ + + + + + A AA + + Sbjct: 54 DVSQLETSCMILGHHIDLPLGIAPVA---MQKMAHPDGEVGNARAAGVAGCIFVLSTLAT 110 Query: 97 VMFSD-----HNAIKSFELRQYAPHTV------LISNLG--AVQLNYDFGVQKAHQAVHV 143 D K F+L Y + N G A+ L D V + V Sbjct: 111 TSLEDVAAAAPETCKWFQLYIYKDRALTESLVRRAENAGFKALVLTVDAPV-FGQRRDDV 169 Query: 144 LGADGLFLHLN-----------PLQEIIQPNGNT------NFADLSSKIALLSSAMDVPL 186 L HL+ + E+ N + I L +P+ Sbjct: 170 RNKFSLPSHLSLANFHGELASGVVSEMGGSGLNEYVVSQFDATVTWQDIKWLKLLTHLPI 229 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 ++K V L++ D EL + G ++ GG + ++ +I Sbjct: 230 VVKGV---LTAEDAELAREFGCAGIIVSNHGGRQLDSTPATIEVLPEI------------ 274 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAI 305 + + + GG+R G DILK++ LGA + L P A D V + Sbjct: 275 -----VKAVGKDLVVMLDGGIREGNDILKALALGAQMVFLGRPSIWALACDGQRGVEQLL 329 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTAL 333 E LR++F +SM L G + + ++ + Sbjct: 330 ELLREDFKISMALTGCRTLADIQATMVV 357 >gi|260786701|ref|XP_002588395.1| hypothetical protein BRAFLDRAFT_198995 [Branchiostoma floridae] gi|229273557|gb|EEN44406.1| hypothetical protein BRAFLDRAFT_198995 [Branchiostoma floridae] Length = 297 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 117/333 (35%), Gaps = 79/333 (23%) Query: 30 HLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA 89 +I R L +++ D SV LG +L FP+ I+ + ++ A AA A Sbjct: 1 RIIPRNLRDVNIR--DTSVTVLGSRLDFPVAIAPTA------LHKLTHPDAEAATSKGAA 52 Query: 90 -----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 M + S + ++ + AP V + +++ + Sbjct: 53 SMNTLMVLSSWSSQSLE-------QVSEAAPRGVRW--FYMLFYRDRDRMKRLLERAERA 103 Query: 145 GADGLFLHLN--------------PLQEII----------QP---NGNTNFADL------ 171 G + L ++ Q + QP + A L Sbjct: 104 GYTAIVLTVDQPIFPYSIRRKPIFFTQSLFSLPNVWLDDDQPGPLGSKEHGAGLIKIAKE 163 Query: 172 ---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +A + + +P++LK + LS+ D + + G+ ++ GG + + Sbjct: 164 AATWEDVAWIKNNTRLPVVLKGI---LSAEDARIAVDLGVAGIYVSNHGGRQQDGVPATI 220 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ DI EA+ GG+R G D+LK++ LGA + Sbjct: 221 DVLPDI-----------------VSAVGGEAEVYLDGGVRTGTDVLKALALGARCVFIGR 263 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 P L A++ ++ V ++ L+ E ++M G Sbjct: 264 PALWGLALNGAEGVQQVLQILKDELSLAMARAG 296 >gi|289621340|emb|CBI52123.1| unnamed protein product [Sordaria macrospora] Length = 521 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 113/363 (31%), Gaps = 92/363 (25%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLG-KKLSFPLLISSMTGGNNKMIERINRNL 79 N + F D L R + + D S LG K+ PL +S L Sbjct: 162 HNTQAFRDILLRPRVF--VDCTKADTSTTLLGSHKVGIPLYVSPAA-------------L 206 Query: 80 AIAAE---KTKVAMAVGSQRVM--FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A A + +A + S M S++ ++ ++ A + VQ N Sbjct: 207 ARLAHPDGEAGIAKGISSFGAMQLVSNNASMTPEQIVAEAKPGSIFGWQLYVQTNRSKSE 266 Query: 135 QKAHQAVHVLG-ADGLFLHLNPLQ----------------EIIQPNGNTN---------- 167 + + + L L+ E+++ N Sbjct: 267 AMLARINKLRDHFKCIVLTLDAPHPGKREHDEKSNLEAAGELVESASNAKTDAEKKPGGG 326 Query: 168 ------FAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG------IR 209 F + + L+ D+P++LK + + D L + ++ Sbjct: 327 GVGQQLFWGTAADLTWETTLPWLAKHTDLPIVLKGIQ---THEDAYLAAQYARKNPGTVK 383 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASG 265 ++ GG + P +L R YC E + G Sbjct: 384 AVILSNHGGRALDTAP------------------PAVHTLLEIRKYCPEVFGAVEVWIDG 425 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G++ G D +K++ LGA G+ L V E L++E I M LLG K + Sbjct: 426 GIKRGTDAVKALCLGAKAVGVGRAALWGLGASGWQGVERTFEILQQEIITCMKLLGAKTI 485 Query: 325 QEL 327 +L Sbjct: 486 DDL 488 >gi|115455773|ref|NP_001051487.1| Os03g0786100 [Oryza sativa Japonica Group] gi|122246745|sp|Q10CE4|GLO1_ORYSJ RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; AltName: Full=Glycolate oxidase 1; Short=GOX 1; Short=OsGLO1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO1 gi|317376187|sp|B8AKX6|GLO1_ORYSI RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; AltName: Full=Glycolate oxidase 1; Short=GOX 1; Short=OsGLO1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO1 gi|108711436|gb|ABF99231.1| expressed protein [Oryza sativa Japonica Group] gi|113549958|dbj|BAF13401.1| Os03g0786100 [Oryza sativa Japonica Group] gi|215704354|dbj|BAG93788.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767732|dbj|BAG99960.1| unnamed protein product [Oryza sativa Japonica Group] gi|218193863|gb|EEC76290.1| hypothetical protein OsI_13800 [Oryza sativa Indica Group] gi|222625926|gb|EEE60058.1| hypothetical protein OsJ_12861 [Oryza sativa Japonica Group] Length = 369 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 112/349 (32%), Gaps = 56/349 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F R L I ++D S LG K+S P++I+ KM Sbjct: 30 AEDEWTLKENREAFSRILFRPRIL--IDVSKIDMSATVLGFKISMPIMIAPSA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 A + S S + ++ R V + Sbjct: 86 HPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVEQLVRRA 145 Query: 122 N---LGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGNT-NFADL----- 171 A+ L D +A + +L L + + + N + L Sbjct: 146 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVA 205 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L S +P+L+K V +++ D L + SG ++ G Sbjct: 206 GQIDRTLSWKDVKWLQSITSLPILVKGV---ITAEDARLAVHSGAAGIIVSNHGARQLDY 262 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T +LE GG+R G D+ K++ LGA+ Sbjct: 263 VPA------------------TISALEEVVTAAAGRIPVYLDGGVRRGTDVFKALALGAA 304 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A + V + +R+EF ++M L G + ++ Sbjct: 305 GVFIGRPVVFALAAEGEAGVRNVLRMMREEFELTMALSGCTSLADITRA 353 >gi|253997461|ref|YP_003049525.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylotenera mobilis JLW8] gi|253984140|gb|ACT48998.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylotenera mobilis JLW8] Length = 362 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 122/338 (36%), Gaps = 50/338 (14%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 + N FD L+ R L ++ + G+ PLL++ + ++ Sbjct: 45 SLKANLDAFDGVQLMSRPLTDVRCGH--TRINLFGQNFEHPLLLAPIA--YQRLFHDHGE 100 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIK------SFELR--QYAPHTVLISN------L 123 ++A A + V S S I+ F+L P T+ + N Sbjct: 101 SVAAMAANAQTGQMVVSSLASQSLEEIIEAAGQPLWFQLYWQGDRPRTLRLLNRALSAGY 160 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL------SSKIAL 177 AV D V++A A+ + L Q +Q N + F +A Sbjct: 161 NAVMFTVDAPVKQAVMALPD-DVRAVNLESPLSQPPVQANQSLVFDGWMTQAPSWDDVAW 219 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L + VPLL+K + L + D+ L+ G ++ GG Sbjct: 220 LRDQIKVPLLVKGL---LHTDDVANTLRLGCDGLVVSNHGGRVLD--------------- 261 Query: 238 FQDWGIPTPLSLE--MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPA 294 G+PT L++ +A +A + G+R G D K++ LGA + P + Sbjct: 262 ----GVPTSLAVLPEIANMVAGKACLLFDSGIRRGQDAFKALALGADAVMIGRPYIWGLS 317 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + V I +R E ++M L G + ++ L++ Sbjct: 318 VAGALGVAHVIRLMRDELEMTMALSGAATLADIKLSSL 355 >gi|223999479|ref|XP_002289412.1| glycolate oxidase [Thalassiosira pseudonana CCMP1335] gi|220974620|gb|EED92949.1| glycolate oxidase [Thalassiosira pseudonana CCMP1335] Length = 398 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 128/388 (32%), Gaps = 103/388 (26%) Query: 15 KDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISS---------- 63 + + N+ F W+L R + P + G++LS P+ +S Sbjct: 33 DEQTLSENESAFKAWYLRPRVMRP---VGSISTVTTLFGQRLSMPVFVSPAGVHALCDEV 89 Query: 64 ---------------MTGGNNKMIERINR-------------------------NLAIAA 83 + G + I + LA A Sbjct: 90 HGECAAARACGKVGTIFGLSQHATRSIEQVAEATQGNTNLWYQSYILKDREMTLRLARRA 149 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 K + + V S R F + +A +F P + N YD V +A Sbjct: 150 AKAGYRGIFLTVDSVRFGFREADARNNFS---SLPEPHRLVN-------YDDEVSQAQHP 199 Query: 141 VHVLGADGLFL---HLNPLQEIIQP-------NGNTNFADLSSKIALLSSAMDVPLLLKE 190 A + + QE N ++ D+ + D+PL++K Sbjct: 200 KKAWVAPEASVDKSKIYSGQEEAWDQNTEQLFEQNPSWEDVRWLKREVCR--DLPLIVKG 257 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL- 249 + +++ D K+G ++ GG +PT L Sbjct: 258 I---MTAEDAIEAKKAGADGVMVSNHGGRGLDSA------------------LPTIDVLP 296 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESL 308 E+ ++ + G+R G D+LK++ LGA+ G+ P F ++ DAV+ ++ Sbjct: 297 EIVAAVGDQFPVLLDSGIRRGTDVLKALALGATAVGIGKPLFFALSVGGEDAVLNLLQMF 356 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++E +M + G K V ++ + RH Sbjct: 357 QRETEAAMAICGCKSVSDVTR-QLVTRH 383 >gi|46108290|ref|XP_381203.1| hypothetical protein FG01027.1 [Gibberella zeae PH-1] Length = 488 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 108/344 (31%), Gaps = 64/344 (18%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINR 77 N F + + R + D S +G K+ P+ +S +M + E + Sbjct: 141 SYNNHVFKNILIRPRVF--VDCTACDTSTTLIGNKVGLPIFVSPAAMARLAHPDGE---Q 195 Query: 78 NLAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ--- 127 +A A + A Q + + I ++L + L + Sbjct: 196 GIAKACARFGAMQIVSNNASMTPEQIIEGAKPGQIFGWQLYVQNQRDKSEAMLKRINSMR 255 Query: 128 -------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN----GNTNFAD------ 170 L D V + D P +P G F Sbjct: 256 DYYKFICLTLDAPVPGKRELDEKQNFDYSEPS--PASGESKPGAGGVGQQLFFGTAADLT 313 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESHR 228 + + L++ D+P++LK + D L K + ++ GG + Sbjct: 314 WKTTLPWLAAHTDLPIVLKGLQA---HEDAFLAAKYAPQVKAIILSNHGGRAADTAP--- 367 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLG 284 P +L R YC E Q GG++ G D++K++ LGAS Sbjct: 368 ---------------PAMHTLLEIRKYCPEIMSKVQIWIDGGIKRGTDVVKALCLGASGV 412 Query: 285 GLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+ L A V +E L E M LLG K + EL Sbjct: 413 GIGRAALFGLGAGGQAGVERTLEILEAETATCMRLLGAKNISEL 456 >gi|22126477|ref|NP_669900.1| L-lactate dehydrogenase [Yersinia pestis KIM 10] gi|45441280|ref|NP_992819.1| L-lactate dehydrogenase [Yersinia pestis biovar Microtus str. 91001] gi|51595915|ref|YP_070106.1| L-lactate dehydrogenase [Yersinia pseudotuberculosis IP 32953] gi|108806861|ref|YP_650777.1| L-lactate dehydrogenase [Yersinia pestis Antiqua] gi|108812572|ref|YP_648339.1| L-lactate dehydrogenase [Yersinia pestis Nepal516] gi|145598693|ref|YP_001162769.1| L-lactate dehydrogenase [Yersinia pestis Pestoides F] gi|149366487|ref|ZP_01888521.1| L-lactate dehydrogenase [Yersinia pestis CA88-4125] gi|153950600|ref|YP_001401378.1| L-lactate dehydrogenase [Yersinia pseudotuberculosis IP 31758] gi|162418459|ref|YP_001606191.1| L-lactate dehydrogenase [Yersinia pestis Angola] gi|165925592|ref|ZP_02221424.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. F1991016] gi|165939599|ref|ZP_02228144.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. IP275] gi|166009327|ref|ZP_02230225.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. E1979001] gi|166211587|ref|ZP_02237622.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. B42003004] gi|167400287|ref|ZP_02305800.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421786|ref|ZP_02313539.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424145|ref|ZP_02315898.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024731|ref|YP_001721236.1| L-lactate dehydrogenase [Yersinia pseudotuberculosis YPIII] gi|186895006|ref|YP_001872118.1| L-lactate dehydrogenase [Yersinia pseudotuberculosis PB1/+] gi|218928707|ref|YP_002346582.1| L-lactate dehydrogenase [Yersinia pestis CO92] gi|229841554|ref|ZP_04461713.1| L-lactate dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843665|ref|ZP_04463808.1| L-lactate dehydrogenase [Yersinia pestis biovar Orientalis str. India 195] gi|229894231|ref|ZP_04509414.1| L-lactate dehydrogenase [Yersinia pestis Pestoides A] gi|229902961|ref|ZP_04518078.1| L-lactate dehydrogenase [Yersinia pestis Nepal516] gi|270486747|ref|ZP_06203821.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis KIM D27] gi|294503542|ref|YP_003567604.1| L-lactate dehydrogenase [Yersinia pestis Z176003] gi|81825851|sp|Q66C32|LLDD_YERPS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81853518|sp|Q8ZFV8|LLDD_YERPE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|122980074|sp|Q1CGZ1|LLDD_YERPN RecName: Full=L-lactate dehydrogenase [cytochrome] gi|123372618|sp|Q1C9P0|LLDD_YERPA RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990712|sp|A7FJF0|LLDD_YERP3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990713|sp|A4TKI4|LLDD_YERPP RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491781|sp|B2JZQ1|LLDD_YERPB RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491782|sp|A9R623|LLDD_YERPG RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491783|sp|B1JPU0|LLDD_YERPY RecName: Full=L-lactate dehydrogenase [cytochrome] gi|21959471|gb|AAM86151.1|AE013861_8 L-lactate dehydrogenase [Yersinia pestis KIM 10] gi|45436140|gb|AAS61696.1| L-lactate dehydrogenase [Yersinia pestis biovar Microtus str. 91001] gi|51589197|emb|CAH20817.1| L-lactate dehydrogenase [Yersinia pseudotuberculosis IP 32953] gi|108776220|gb|ABG18739.1| L-lactate dehydrogenase [Yersinia pestis Nepal516] gi|108778774|gb|ABG12832.1| L-lactate dehydrogenase [Yersinia pestis Antiqua] gi|115347318|emb|CAL20214.1| L-lactate dehydrogenase [Yersinia pestis CO92] gi|145210389|gb|ABP39796.1| L-lactate dehydrogenase [Yersinia pestis Pestoides F] gi|149290861|gb|EDM40936.1| L-lactate dehydrogenase [Yersinia pestis CA88-4125] gi|152962095|gb|ABS49556.1| L-lactate dehydrogenase (cytochrome) [Yersinia pseudotuberculosis IP 31758] gi|162351274|gb|ABX85222.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis Angola] gi|165912515|gb|EDR31147.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. IP275] gi|165922701|gb|EDR39852.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. F1991016] gi|165991882|gb|EDR44183.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. E1979001] gi|166207358|gb|EDR51838.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. B42003004] gi|166960271|gb|EDR56292.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050236|gb|EDR61644.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056994|gb|EDR66757.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751265|gb|ACA68783.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Yersinia pseudotuberculosis YPIII] gi|186698032|gb|ACC88661.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Yersinia pseudotuberculosis PB1/+] gi|229680408|gb|EEO76507.1| L-lactate dehydrogenase [Yersinia pestis Nepal516] gi|229689273|gb|EEO81336.1| L-lactate dehydrogenase [Yersinia pestis biovar Orientalis str. India 195] gi|229697920|gb|EEO87967.1| L-lactate dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703629|gb|EEO90645.1| L-lactate dehydrogenase [Yersinia pestis Pestoides A] gi|262361584|gb|ACY58305.1| L-lactate dehydrogenase [Yersinia pestis D106004] gi|262365675|gb|ACY62232.1| L-lactate dehydrogenase [Yersinia pestis D182038] gi|270335251|gb|EFA46028.1| L-lactate dehydrogenase (cytochrome) [Yersinia pestis KIM D27] gi|294354001|gb|ADE64342.1| L-lactate dehydrogenase [Yersinia pestis Z176003] gi|320015560|gb|ADV99131.1| L-lactate dehydrogenase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 381 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 121/372 (32%), Gaps = 73/372 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L + E+ + G+ + P+++ + G + Sbjct: 29 AYNEQTLRRNTADLADIALRQRVLK--NMSELSLETQLFGETQAMPVVLGPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+K + + + V + A F+L + + L Q Sbjct: 86 RRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQ 145 Query: 128 --------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNTNF 168 D V A + G + L LQ I P NG + Sbjct: 146 AAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRL--LQAIAHPQWAWDVGLNGKPHD 203 Query: 169 AD-----------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGL 204 L + +++ D + K++ L D + + Sbjct: 204 LGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 K G ++ GG + + T +L +A + +A Sbjct: 264 KFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVKGDITILA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ I LGA L F+ A V+ + + +E V+M L G K Sbjct: 306 DSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALI 334 R+ ++ ++ + Sbjct: 366 RIADINRDSLAV 377 >gi|195383652|ref|XP_002050540.1| GJ22209 [Drosophila virilis] gi|194145337|gb|EDW61733.1| GJ22209 [Drosophila virilis] Length = 365 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 117/332 (35%), Gaps = 60/332 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQR- 96 ++D S + LG++L++PL I+ + + + L A AA + + + Sbjct: 54 DVSQLDTSCKILGQQLNWPLGIAPTA---MQKLAHPDGELGTARAAGQAGSIFILSTLST 110 Query: 97 -----VMFSDHNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 V + K F+L Y ++ ++ A+ L D + +A Sbjct: 111 CSIEEVAVAAPETCKWFQLYIYKDRSLTEQLVRRAELAQFKALVLTVDLPINGDRRA-DA 169 Query: 144 LGADGLFLHL---NPLQEIIQP--------------NGNTNFADLSSKIALLSSAMDVPL 186 L HL N E++Q + + I L +P+ Sbjct: 170 RNQFSLPPHLRLANFQDELMQGFVSKLGGSGLNEYVASQFDPSISWQDIKWLQQLTQLPI 229 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + L++ D +L G ++ GG + + +I Sbjct: 230 VLKGI---LTAEDAQLARNFGCAGIIVSNHGGRQLDTAPATIEALPEI------------ 274 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAI 305 + + GG+ G DI K++ LGA + P L A + V + Sbjct: 275 -----VAAVGKDLLVMLDGGIMQGTDIFKALALGAQTVFIGRPALWGLAANGQRGVEQLL 329 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +R + ++M L G ++++ +++ H+ Sbjct: 330 QIMRHDLEITMKLAGCPTLRDIQ--PSMVVHE 359 >gi|229552850|ref|ZP_04441575.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus rhamnosus LMS2-1] gi|258540539|ref|YP_003175038.1| L-Lactate oxidase [Lactobacillus rhamnosus Lc 705] gi|229313832|gb|EEN79805.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus rhamnosus LMS2-1] gi|257152215|emb|CAR91187.1| L-Lactate oxidase [Lactobacillus rhamnosus Lc 705] Length = 371 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 115/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++ +AL I D D S FLG L P++++ + Sbjct: 46 DEWTLAENTKAFNHAQIVPKALSNI--DSPDLSTNFLGIDLKTPVMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + +A G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGLAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFADL-------- 171 +A G G+ L ++ + I PN Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSEGDGKGKGIGE 212 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K + S D + +G ++ GG Sbjct: 213 IYASAAQKINEDDVRRIAEYTDLPVIVKGIQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ + I G+R G + K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKQVPIIFDSGIRRGSHVFKALAAGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ + V + E + E + M L GTK ++++ Sbjct: 313 DLVAFGRPVIYGLALGGAQGVQSVFEQIDHELEIIMQLAGTKTIEDVKHAPL 364 >gi|195122548|ref|XP_002005773.1| GI18893 [Drosophila mojavensis] gi|193910841|gb|EDW09708.1| GI18893 [Drosophila mojavensis] Length = 365 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 111/329 (33%), Gaps = 61/329 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LAIAAEKTKVAMAVGSQR-- 96 + +++ S G+ +PL I+ + +M A AA + + + Sbjct: 54 NVAQLETSCSIWGEHFKWPLGIAPVA--MQRMAHPDGEKGTARAAGRAGCPFILSTLSNT 111 Query: 97 ----VMFSDHNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHVL 144 V + K F+L Y + ++ A+ L D + A + V Sbjct: 112 PLEEVAAAAPETCKWFQLYIYKDRALTESLVRRAERADFKALVLTVDAPI-FAQRRADVR 170 Query: 145 GADGLFLHLNP------------------LQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 L HL+ L E + ++ I L +P+ Sbjct: 171 NKFCLPAHLSLGNFQGAQSNVASSTGDSGLSEYVASQFDSTVTW--QDIKWLKQLTQLPI 228 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + L++ D EL + G ++ GG + T Sbjct: 229 VLKGI---LTAEDAELAREFGCAGIIVSNHGGRQLDSTPA------------------TI 267 Query: 247 LSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAA 304 +L E+ R + GG+R G DI K++ LGA + + P A D V Sbjct: 268 EALPEVVRAVGTNLIVMLDGGIREGNDIFKALALGAQMVFIGRPAIWALACDGQRGVEHL 327 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + LR +F ++M L G + ++ + + Sbjct: 328 LTLLRNDFDITMALTGCPTLADIQSSMVV 356 >gi|91223246|ref|ZP_01258512.1| L-lactate dehydrogenase [Vibrio alginolyticus 12G01] gi|91192059|gb|EAS78322.1| L-lactate dehydrogenase [Vibrio alginolyticus 12G01] Length = 379 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 118/374 (31%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + LQ + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMRHPSWALDVGLLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 IFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + +L ++ + Sbjct: 363 GAKSIADLSRDSLV 376 >gi|255073991|ref|XP_002500670.1| glycolate oxidase [Micromonas sp. RCC299] gi|226515933|gb|ACO61928.1| glycolate oxidase [Micromonas sp. RCC299] Length = 402 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 68/380 (17%), Positives = 123/380 (32%), Gaps = 88/380 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF--LG-KKLSFPLLISSM----- 64 + + N+ F + R + + +VD + LG + L+ PLLI+ + Sbjct: 40 AETESTLRANRAAFSRVTIWPRCM--VDVSDVDTTTHVPALGLRNLAAPLLIAPVAMQRA 97 Query: 65 -----------------------------------TGGN--------------NKMIERI 75 GG+ I Sbjct: 98 AHPDGECAAARACAAHSIPYCASQQSTTAIEEIGRAGGDDAPRMFQLYVLSDREATTRLI 157 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 R A +A T + + V + + + + FEL+ + ++N+ A + Sbjct: 158 RR--AESAGATALCITVDAPVLGRRERDVRNRFELKA----GLKLANVDA--------KK 203 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPN-GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 +Q + G D + Q I G + + +A L S +PL+LK + Sbjct: 204 NQNQNQNQAGPDKSAVDAKRAQSAIARRIGGRDASLTWDHLAWLRSVTHLPLVLKGI--- 260 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ D K G+ ++ GG + D ++ + E + Sbjct: 261 VTYADAARAAKEGVAGVWVSNHGGRQLDGSPATLDALPEVVAGVK----------EGVKE 310 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFI 313 I GG+R G D LK++ LGA L + P A V A+E L +E Sbjct: 311 GAPTCVVIFDGGVRRGTDALKALALGADLVAVGRPVAWGLACGGELGVGKAVELLTEELR 370 Query: 314 VSMFLLGTKRVQELYLNTAL 333 +M L G + V+ + Sbjct: 371 TAMTLAGCRDVRSARNRELV 390 >gi|199598503|ref|ZP_03211920.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus rhamnosus HN001] gi|199590545|gb|EDY98634.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Lactobacillus rhamnosus HN001] Length = 371 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 115/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++ +AL I D D S FLG L P++++ + Sbjct: 46 DEWTLAENTKAFNHAQIVPKALSNI--DSPDLSTNFLGIDLKTPVMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + +A G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGLAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFADL-------- 171 +A G G+ L ++ + I PN Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSEGDGKGKGIGE 212 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K + S D + +G ++ GG Sbjct: 213 IYASAAQKINEDDVRRIAEYTDLPVIVKGIQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ + I G+R G + K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKQVPIIFDSGIRRGSHVFKALASGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ + V + E + E + M L GTK ++++ Sbjct: 313 DLVAFGRPVIYGLALGGAQGVQSVFEQIDHELEIIMQLAGTKTIEDVKHEPL 364 >gi|260777807|ref|ZP_05886700.1| L-lactate dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] gi|260605820|gb|EEX32105.1| L-lactate dehydrogenase [Vibrio coralliilyticus ATCC BAA-450] Length = 379 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 122/373 (32%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + D L R L + +++ E G+K + P+ +S + TG + E Sbjct: 32 EHTLRRNTEDLADIALKQRVLK--NMSDLNLETEIFGEKFALPIALSPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNL 123 AIAAE + + + V + + F+L R + + + + Sbjct: 90 V---QAAIAAENKGIPFTMSTVSVCPIEEVTPELARPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--FQAMRHPSWAFDVGLFGKPHDL 204 Query: 163 ------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGEPTKLEDYIGWLGENFDPSISWEDLEWIRDFWDGPMVIKGI---LDEQDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 +K G ++ GG + + + +L +A + + Sbjct: 262 AVKFGADGIVVSNHGGRQLDGV------------------MSSAKALPSIADAVKGDLKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R G+D+++ + LGA L ++ A V ++ KE V+M L G Sbjct: 304 FVDSGIRTGLDVVRMLALGADCAMLGRSYIYALAAQGQAGVENLLDLYEKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +QEL + + Sbjct: 364 AKNIQELTRESLV 376 >gi|194366136|ref|YP_002028746.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stenotrophomonas maltophilia R551-3] gi|259491775|sp|B4SMK1|LLDD_STRM5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194348940|gb|ACF52063.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stenotrophomonas maltophilia R551-3] Length = 379 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 120/376 (31%), Gaps = 83/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLKRNVSDLSDIALRQRVL--RNMSDLSLETELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN----------- 163 Q D V A + G + + Q I P+ Sbjct: 144 AQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRI--GQAITHPHWAWDVGLFGRP 201 Query: 164 --------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G ++ + + P+++K + L D Sbjct: 202 HDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGI---LDPDD 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG + + T +L +A + Sbjct: 259 ARDAVKFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVQGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 + +A G+R G+D+++ + LGA L F+ A V ++ + KE V+M Sbjct: 301 LKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTAL 333 L G +R+ ++ ++ + Sbjct: 361 LTGARRIADIGRDSLV 376 >gi|145611506|ref|XP_368909.2| hypothetical protein MGG_00335 [Magnaporthe oryzae 70-15] gi|145018780|gb|EDK03059.1| hypothetical protein MGG_00335 [Magnaporthe oryzae 70-15] Length = 531 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 104/342 (30%), Gaps = 68/342 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINR------N 78 D L R + D S LG K+ PL +S +M + I + Sbjct: 185 DILLRPRVF--VDCTSCDLSTTMLGNKVGTPLYVSPAAMARLAHPDGEHGIAKGISSFGG 242 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ----------L 128 L I + A Q V + + ++L + L + L Sbjct: 243 LQIVSNN---ASQTPEQIVEGAAPGQVFGWQLYVQNDRNKNYAMLKRIHALRDHYKFIVL 299 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-------GNTNFAD------LSSKI 175 D V + + ++ P G F ++ + Sbjct: 300 TLDAPVPGKRELDEKQQFLESGMTMSAASAGGAPKHPAGGGVGQQLFWGTAADLTWTTTL 359 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-----IRYFDIAGRGGTSWSRIESHRDL 230 L+ D+P++LK + + D L + ++ ++ GG + Sbjct: 360 PWLAEHTDLPIVLKGIQ---THEDAYLAAQYAAKYGTVKAIILSNHGGRALDTAP----- 411 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P +L R YC E + GG++ G D++K++ LGA G+ Sbjct: 412 -------------PAVHTLLEIRKYCPEVFDQIEVWVDGGIKRGTDVIKALCLGAKAVGV 458 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L V E L E M LLG K V +L Sbjct: 459 GRAALYGLGAGGWKGVERTFEILNGEMATCMKLLGAKTVADL 500 >gi|327261139|ref|XP_003215389.1| PREDICTED: hydroxyacid oxidase 1-like [Anolis carolinensis] Length = 370 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 117/372 (31%), Gaps = 86/372 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F L R L +D S LG+K+S P+ +++ + + Sbjct: 31 ADEQQTLAENVAAFSRLKLYPRMLK--DVSSLDLSTSVLGQKVSMPICVAATA---MQCM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +A A M + S E+ Q AP V L + + Sbjct: 86 AHADGEIATVRACRSMGTGMMLSSWATSSIE--------EVAQAAPEAVRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNP---------------------------------- 155 + +A G G+F+ ++ Sbjct: 137 REVTKSLVRRA-EKTGYKGIFVTVDTPFLGKRLDDVRNKFQLPPHLRMKNFETNDLAFSS 195 Query: 156 ---------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L + + + + L +P++ K + + + D +K Sbjct: 196 EKGYGENSGLSVYVAEAIDPSINW--EDMKWLRGLTSLPIVAKGI---IRADDAREAVKH 250 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + ++ +I + + GG Sbjct: 251 GVNGILVSNHGARQLDGVPATIEILPEI-----------------IEAVEGKIEVFLDGG 293 Query: 267 LRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA L P A V ++ L++EF ++M L G + V+ Sbjct: 294 IRKGTDVLKALALGARAVFLGRPIIWGLAYQGEQGVKEVLQILKEEFHLAMALSGCQSVE 353 Query: 326 ELYLNTALIRHQ 337 + L+R + Sbjct: 354 AIDRT--LVRRE 363 >gi|225175313|ref|ZP_03729308.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Dethiobacter alkaliphilus AHT 1] gi|225169065|gb|EEG77864.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Dethiobacter alkaliphilus AHT 1] Length = 336 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 106/307 (34%), Gaps = 39/307 (12%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-----LAIAA 83 +H+ R + +I DE D +++ S P+ ++ +TG + M + L A Sbjct: 55 YHINLRTMHQI--DEPDTTLKMFNHTFSSPIFVAPLTGASYNMGGALTEAEFVSCLTEGA 112 Query: 84 EKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAV 141 ++ +A LR +I + G + A Sbjct: 113 KEAGSLAFTGDGAEDEIYTAGLD---ALRSTGLGIPIIKPRSMDSIKERIGQAEAAGAVA 169 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + DG L ++ G+ ++ L S +PL+LK + ++ + E Sbjct: 170 VGIDIDGAGLVTMAMK------GHPVGPKTFYQLRELKSFTKLPLILKGI---MTVQEAE 220 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++ G ++ GG D+ +I E Sbjct: 221 MAVEMGAEAIVVSNHGGRVLDGTPGVADVLPEI-----------------VERVKGEIFV 263 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 A GG+RNG+D LK + LGA+ + P + A + V +E + + M + G Sbjct: 264 FADGGVRNGIDALKMLALGANAVLVGRPSIWSAFGGGAEGVGQMLEKMTAQLRHGMLMTG 323 Query: 321 TKRVQEL 327 ++ + Sbjct: 324 CVNLKAI 330 >gi|145332397|ref|NP_001078155.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332642002|gb|AEE75523.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 366 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 113/352 (32%), Gaps = 98/352 (27%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISS-------------------------MT 65 R L I ++D + LG K+S P++++ MT Sbjct: 46 FRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMT 103 Query: 66 GGNNKMI----------------------ERINRNLAIAAEKTK---VAMAVGSQRVMFS 100 + + L AE+ +A+ V + R+ Sbjct: 104 LSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRR 163 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 + + F L P + + N + L + GL + Sbjct: 164 ESDIKNRFTL----PPNLTLKNFEGLDLGK----------MDEANDSGLA-------SYV 202 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L + +P+L+K V L+ D + +++G ++ G Sbjct: 203 AGQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDARIAIQAGAAGIIVSNHGARQ 257 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T +LE + GG+R G D+ K++ L Sbjct: 258 LDYVPA------------------TISALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 299 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 GAS + P + A + V ++ LR EF ++M L G + ++E+ N Sbjct: 300 GASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRN 351 >gi|325126506|gb|ADY85836.1| lactate oxidase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 192 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 21/154 (13%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 +A +P+++K V C D+E+ L +G + GG + D+ ++ Sbjct: 27 NAKGLPVIVKGVNCA---EDVEVALTAGADGVYVTNHGGREIDGAPATIDVLPEV----- 78 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSS 298 I GG+R G + K++ LGA L G+ P+L A+ Sbjct: 79 ------------VEAVNGRCPVIFDGGVRRGSHVFKALALGADLVGIGRPYLYGLALGGP 126 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 V + I L E + M L G K ++++ Sbjct: 127 HGVASIINELNDELKIDMQLTGCKTIEDVKHARL 160 >gi|303327584|ref|ZP_07358025.1| dehydrogenase, FMN-dependent family [Desulfovibrio sp. 3_1_syn3] gi|302862524|gb|EFL85457.1| dehydrogenase, FMN-dependent family [Desulfovibrio sp. 3_1_syn3] Length = 338 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 99/320 (30%), Gaps = 43/320 (13%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI-ERIN 76 N + L R + E+ E + E LG LS P+LI+ + G M Sbjct: 44 SFRANVSALEKICLKMRLIHEVRAPE--TACEVLGLSLSMPVLIAPLAGTTFNMGNGLPE 101 Query: 77 RNLAIA----AEKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 A A G + A + + + P + ++ Sbjct: 102 ERFAQVVTEGARSAGTISCTGDGTSEVFGSGLNAVQAAEGWGIPVIKPWAGE-AFFERLE 160 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 G + + L P+ S I + A+ + L Sbjct: 161 RAAQAGCRVVGMDIDTAAITALAKSKRPVS--------PKSRAELSAIVEKAHALGLKFL 212 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK V LS D + G ++ GG ++ + T Sbjct: 213 LKGV---LSVEDALAAEECGCDAIVVSNHGGRAFEAVPG------------------TAA 251 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 +L + GG+R G D+LK + LGA+ + P + AM + V + Sbjct: 252 ALPAIAQSVRRMTVLVDGGVRAGADVLKMLALGAAAVLIGRPAIIAAMGGEEEGVRMLLT 311 Query: 307 SLRKEFIVSMFLLGTKRVQE 326 ++++ SM L G V+E Sbjct: 312 RMQRQLEESMLLTGCASVRE 331 >gi|310800409|gb|EFQ35302.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 390 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 119/360 (33%), Gaps = 65/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-----GG 67 + ++RN ++D L + L + +D + GK+ P+ I+ GG Sbjct: 37 ADDELTLERNHAAYNDILLRPQML--RNVSSIDTTTTIFGKRYDIPIAIAPTAYQKLAGG 94 Query: 68 NNK-----MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL------------ 110 + + + NL +++ T V F+L Sbjct: 95 EGELDVARAVSNLGTNLTLSSNATTSLEDVEKAIPQRGAEYPRPWFQLYFLGNRDLTAQL 154 Query: 111 --RQYAP---------HTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 R TV++ N L G+ A+ + +GL L Sbjct: 155 IRRADNAGYEALVLTVDTVILGNRLQERRTPLELPPGIAMANAEFGAISTEGLLLRAKTA 214 Query: 157 QEI--IQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 E IQ + + I L S + ++LK + L++ D + + +G+ Sbjct: 215 AEYNRIQDENRDRLVNSSLEWNEVIPWLRSQTKMKIILKGI---LTAEDTQRSIDAGVDA 271 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + S + +I V I GG+ G Sbjct: 272 IIVSNHGGRQLDGVPSTIEALPEITEV-----------------VRGRIPVIIDGGITRG 314 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+ K++ LGA L + L A D V + L +E +M L+G +++++ Sbjct: 315 TDVFKALALGADLCLIGRTALWGLAWDGQRGVEGVLNILERELARAMALMGVAKLKDISR 374 >gi|258404295|ref|YP_003197037.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfohalobium retbaense DSM 5692] gi|257796522|gb|ACV67459.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfohalobium retbaense DSM 5692] Length = 336 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 105/315 (33%), Gaps = 40/315 (12%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N + R L E E D SVE LG+ L P+L + + G + M ++ Sbjct: 42 AFQSNVTALAEKQFNMRLLHE--VTEPDTSVEMLGQTLDIPVLAAPIGGVSFNMGGGVSE 99 Query: 78 NLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 I A + VG + + F + G + Sbjct: 100 GEYIRAVVNGCKAEGTLGCVG---------DGVPPFIHEEGYAAIAEAGGAGIPFIKPWE 150 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQE---IIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + + A + ++ ++ G + ++ + + ++K Sbjct: 151 DEELYEKMRKAADAGASIVGMDVDAAGLITLRKMGRPVSPKPAHELRKIRETTSMRFIIK 210 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V ++ + +L +++G ++ GG ++ + + Sbjct: 211 GV---MTPDEAKLAVEAGADGIVVSNHGGRVLDHTPGVAEILAGVAD------------- 254 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESL 308 + +A GG+R G D+LK + LGA + P A+ D V AA++ + Sbjct: 255 ----AVQGQTAILADGGVRTGGDVLKMLALGAEAVMVGRPISIAAVGGLEDGVRAALQQM 310 Query: 309 RKEFIVSMFLLGTKR 323 R E +M L GT R Sbjct: 311 RTELKQAMVLTGTAR 325 >gi|156393406|ref|XP_001636319.1| predicted protein [Nematostella vectensis] gi|156223421|gb|EDO44256.1| predicted protein [Nematostella vectensis] Length = 379 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 125/360 (34%), Gaps = 61/360 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + + N++ F L R L I V+ S LG+ +S P+ I+ Sbjct: 42 AENEETLRENREAFKRIKLRPRMLRGI--SHVNMSTTILGQPISMPVCIAPTAFHKMAHP 99 Query: 66 -------------GGNNKMIERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFEL 110 G + N ++ A V + M D +K++ + Sbjct: 100 HGELATARAAAQAGTCMTLTWAANSSIEDVAATAPAGVKWLL---IYMMKDRELVKAW-V 155 Query: 111 RQYAPHTV--LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 R+ ++ + + + ++ +++ + H + + + NGNT F Sbjct: 156 RRAEESGFSGIVVTVDSPEGPKNYSIERNKFTLPSNLTIPNLGHKKYVLKSVDGNGNTKF 215 Query: 169 ----------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 I L +P++LK + L+ D L ++ GI ++ GG Sbjct: 216 VSAGNELFDGRVTWKSIDWLKKLSRLPIVLKGI---LTPEDARLAVEHGIDGIIVSNHGG 272 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 +++ D DI + + + GG+R G D+ K++ Sbjct: 273 RQLDGVQATIDALPDI-----------------VKAVQGKLEVYMDGGVRLGTDVFKALA 315 Query: 279 LGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 LGA + P A + V +E LR+E ++M L G + ++ + + +Q Sbjct: 316 LGARAVFVGRPVIWGLAYKGEEGVRQVLELLREELRLAMILSGCGSLDDVTSSYVIPANQ 375 >gi|169625652|ref|XP_001806229.1| hypothetical protein SNOG_16101 [Phaeosphaeria nodorum SN15] gi|111055353|gb|EAT76473.1| hypothetical protein SNOG_16101 [Phaeosphaeria nodorum SN15] Length = 407 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 113/377 (29%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNK 70 + N + + + R L +I VD SV G K + P+ + ++M G + Sbjct: 37 ADSGSTLAENISAYQKYRIRPRVLRDI--SSVDTSVPIFGHKNTVPIGVAPTAMQGLAHS 94 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVM-FSD------HNAIKS-----FELRQYAPHTV 118 E A A + + M + S D + FE R + + Sbjct: 95 EGEL---ATARACKNMGIVMGLSSFSTTSLEDVKGALGPEHPGALQLYLFEDRGQSQRLI 151 Query: 119 LISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQ----------- 161 + A L D V + + + L HL N QE Sbjct: 152 QRAKKAGYKAAFLTVDTPV-LGRRNLEIRNQFTLPKHLKVANFNQEDGGEDEVEIKDRDT 210 Query: 162 --------------------PNGNTNFAD--------LSSKIALLSSAMD--VPLLLKEV 191 P G F IA L + + +K + Sbjct: 211 EATEERNGSGQDSSKSKRTPPTGPITFHTHAPNPTLCWERDIAWLKEQCHPEMEVWVKGI 270 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G D L G+ ++ GG + + D ++ Sbjct: 271 ATG---EDALLACHHGVDGIVVSNHGGRQLNGALATIDALPEVAQA-------------- 313 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRK 310 R + GG+R+G D+ K++ LGA + P L A + V ++ L Sbjct: 314 VRSQSKKIPVHVDGGIRHGTDVFKALALGADFVWVGRPVLWGLAYKGQEGVELCLKLLSD 373 Query: 311 EFIVSMFLLGTKRVQEL 327 E + M L G +V+++ Sbjct: 374 EIKLCMGLAGVTKVEDI 390 >gi|303321964|ref|XP_003070976.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110673|gb|EER28831.1| cytochrome b2, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040504|gb|EFW22437.1| FMN-dependent dehydrogenase [Coccidioides posadasii str. Silveira] Length = 492 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 117/350 (33%), Gaps = 76/350 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + L R I + D S LG KL P+ +S LA Sbjct: 143 NNSVYRSILLRPRVF--IDCKKCDLSTNILGYKLGSPIYVSPTAV----------ARLAH 190 Query: 82 AAEKTKVAMAV---GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A + +A A G+ +++ ++ + ++ P + VQ + Sbjct: 191 PAGEAGIAAACSKFGTMQLISNNASMTPEQVVKDAKPD-QIFGWQLYVQTDKSKSETMLA 249 Query: 139 QAVHVLGADGLFLHLN---PLQ----------------EIIQPNGNTNFAD--------- 170 + + + L L+ P + E+++ +G T Sbjct: 250 RIKKLKAIKFVCLTLDVPVPGKREDDERTKEPNNLSTAEMVKASGGTPVVGGSGIGKQLF 309 Query: 171 --------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + L+ D+P++LK + + I ++ ++ GG + Sbjct: 310 GGTDPSLTWKTTLPWLAKHTDLPIVLKGLQTHEDAY-IASLHTPQVKAIILSNHGGRAMD 368 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSII 278 P +L R YC E + GG++ G D++K++ Sbjct: 369 TAP------------------PAVHTLLEMRKYCPEVFDKLEVWVDGGIKRGTDVVKALC 410 Query: 279 LGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA G+ P L + V ++ L +E +M LLG +RV +L Sbjct: 411 LGAKAVGIGRPALFGLGAGGIEGVERVLQILNEETQTAMRLLGVERVDDL 460 >gi|323494871|ref|ZP_08099963.1| L-lactate dehydrogenase [Vibrio brasiliensis LMG 20546] gi|323310835|gb|EGA64007.1| L-lactate dehydrogenase [Vibrio brasiliensis LMG 20546] Length = 379 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 117/373 (31%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + +N + D L R L + +++ E G+KLS P+ ++ + TG + E Sbjct: 32 EHTLRKNTEDLADIALKQRVL--NNMEDLSLDTEIFGEKLSLPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AA + + + + + L R + + + + Sbjct: 90 V---QAAKAAANKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAARRV--FQAMRHPSWAFDVGLFGKPHDL 204 Query: 163 ------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGEPTKLEDYIGWLGANFDPSICWKDLEWIRDFWDGPMVIKGI---LDEQDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQF 261 + G ++ GG + + T +L A + + Sbjct: 262 AVSFGADGIVVSNHGGRQLDGV------------------LSTAKALPNIADAVKGDLKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G Sbjct: 304 FVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGQAGVENLLDLYEKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +Q+L ++ + Sbjct: 364 AKSIQDLGRDSLV 376 >gi|254284607|ref|ZP_04959574.1| L-lactate dehydrogenase [Vibrio cholerae AM-19226] gi|150425392|gb|EDN17168.1| L-lactate dehydrogenase [Vibrio cholerae AM-19226] Length = 378 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 124/373 (33%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ ++ P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMVHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGENFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|229591724|ref|YP_002873843.1| L-lactate dehydrogenase [Pseudomonas fluorescens SBW25] gi|229363590|emb|CAY50890.1| L-lactate dehydrogenase [Pseudomonas fluorescens SBW25] Length = 385 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 120/381 (31%), Gaps = 85/381 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N + L R L + D + G++L P+++S + TG + Sbjct: 34 AYAEHTMRANSSDLAEISLRQRIL--RNVDNLSLKTTVFGQELDMPVILSPVGLTGMYAR 91 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGA 125 E A AA V + + V + A +S F+L + A Sbjct: 92 RGEV---QAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMR---NA 145 Query: 126 VQLNYDFGVQKAHQAVHVL--GADGLFLH------------------------------- 152 ++ GV V + GA H Sbjct: 146 LERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGR 205 Query: 153 ----LNPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 N + + +P ++ + + + P+++K + L Sbjct: 206 PHDLGNISKYLGKPTHLEDYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGI---LDPQ 262 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCN 257 D + + G ++ GG + + T +L +A + Sbjct: 263 DAKDAVSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIADAVGD 304 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + G+R+G+D+++ + LGA L A D + V ++ KE V+M Sbjct: 305 DLTVLVDSGIRSGLDVVRMLALGAKACLLGRASAYALAADGQNGVENLLDIFAKEMRVAM 364 Query: 317 FLLGTKRVQELYLNTALIRHQ 337 L G ++++ T + + Q Sbjct: 365 TLTGVTSIEQIDHTTLVGQRQ 385 >gi|153801807|ref|ZP_01956393.1| L-lactate dehydrogenase [Vibrio cholerae MZO-3] gi|153824731|ref|ZP_01977398.1| L-lactate dehydrogenase (cytochrome) [Vibrio cholerae MZO-2] gi|153827819|ref|ZP_01980486.1| L-lactate dehydrogenase [Vibrio cholerae 623-39] gi|229526469|ref|ZP_04415873.1| L-lactate dehydrogenase [Vibrio cholerae bv. albensis VL426] gi|229528121|ref|ZP_04417512.1| L-lactate dehydrogenase [Vibrio cholerae 12129(1)] gi|124122641|gb|EAY41384.1| L-lactate dehydrogenase [Vibrio cholerae MZO-3] gi|148876664|gb|EDL74799.1| L-lactate dehydrogenase [Vibrio cholerae 623-39] gi|149741687|gb|EDM55716.1| L-lactate dehydrogenase (cytochrome) [Vibrio cholerae MZO-2] gi|229334483|gb|EEN99968.1| L-lactate dehydrogenase [Vibrio cholerae 12129(1)] gi|229336627|gb|EEO01645.1| L-lactate dehydrogenase [Vibrio cholerae bv. albensis VL426] Length = 378 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 124/373 (33%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ ++ P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMVHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|256824184|ref|YP_003148144.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Kytococcus sedentarius DSM 20547] gi|256687577|gb|ACV05379.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Kytococcus sedentarius DSM 20547] Length = 409 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 112/379 (29%), Gaps = 85/379 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + + L L EVD S E G++ P+ ++ TG M Sbjct: 58 ANSEESMRRNTEAYRNLELRPTVL--RDVGEVDLSTEVFGQRSELPVGLAP-TGFTRMMH 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +A AA+ V + + + A + P L + + + D Sbjct: 115 AAGEPAVARAAQSAGVPYTLSTMGTTAIEDLAAQV-------PDARRWFQLYSWREDRDR 167 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------FADL-- 171 +A G D L + ++ ++ + N Sbjct: 168 ARGLVERAQEN-GYDTLMVTVDTATGGLRYRDHRNGMTIPPQLTARTLVDASYRPRWWFD 226 Query: 172 --------------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + I + PLL+K + + D Sbjct: 227 FLTTEPLRFATLSSSAGDSMDVIMKTFDPTLSWADIEWIREVWAGPLLVKGIQ---TPSD 283 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + L +G ++ GG R I V + Sbjct: 284 AQRALDAGCDGVYLSNHGGRQLDRAPVPLAELPGIREVL-----------------GPDV 326 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFL 318 I G+ +GVD+L ++ LGA + +L M V ++ LR E V M L Sbjct: 327 PIIVDSGITSGVDVLGALALGADFTMIGRAYLYGLMAGGQRGVERVLDILRAELQVGMQL 386 Query: 319 LGTKRVQELYLNTALIRHQ 337 LG + V EL + H+ Sbjct: 387 LGVRSVDELGPQHVRLDHR 405 >gi|297182800|gb|ADI18953.1| l-lactate dehydrogenase (fMn-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured Rhodobacterales bacterium HF0010_10C01] Length = 382 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 71/375 (18%), Positives = 119/375 (31%), Gaps = 77/375 (20%) Query: 8 DHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN + F+ LI L S +VD S GKK+S P+ S Sbjct: 26 DYIDGAADDELTYARNTESFNSVSLIPNVL--RSVKDVDMSTTIFGKKISMPVYCSPTA- 82 Query: 67 GNNKMIE-RINRNLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFE-----LRQYAP 115 ++ + R +A AA K V S + D K F+ R Sbjct: 83 -VQRLFHYQGERAVAKAANKLNTMFGVSSLSTVSVDEISSISECPKMFQFYFHKDRGLNK 141 Query: 116 HTVLISNLGAVQL-----------NYDFGVQKAHQAVHVLGADG---------------- 148 + + + + N + ++ L + Sbjct: 142 YMLERAKKAKFDVLALTVDTITGGNRERDLKTGFTIPPKLNFNSMLSFAIKPSWLFNFLT 201 Query: 149 --------LFLHLNPLQEIIQPNGNTNFADLSSKIAL-----LSSAMDVPLLLKEVGCGL 195 L H++ + G+ L ++ L S D P LK + + Sbjct: 202 SPAFELPHLQNHVDEGTSAVTSIGSYFSNMLDQTMSWKDAEQLRSNWDGPFALKGI---V 258 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D + + G ++ GG S D + I Sbjct: 259 SVEDAKKAVDIGCDGVIVSNHGGRQLDGAVSPFDQLARI-----------------VDAV 301 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIV 314 ++ + I GG++ G +LK++ LGA +L A V A+ +LR E Sbjct: 302 GDKTEVICEGGIQRGTHVLKALSLGAKACAGGRLYLYALAAAGQKGVEKALSNLRNEIER 361 Query: 315 SMFLLGTKRVQELYL 329 M L+G R+ +L Sbjct: 362 DMKLMGVTRIDQLSR 376 >gi|258509351|ref|YP_003172102.1| L-Lactate oxidase [Lactobacillus rhamnosus GG] gi|257149278|emb|CAR88251.1| L-Lactate oxidase [Lactobacillus rhamnosus GG] gi|259650631|dbj|BAI42793.1| L-lactate dehydrogenase [Lactobacillus rhamnosus GG] Length = 371 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N K F+ ++ +AL I D D S FLG L P++ M + Sbjct: 46 DEWTLAENTKAFNHAQIVPKALSNI--DSPDLSTNFLGIDLKTPVM---MA---QTAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + +A G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGLAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFADL-------- 171 +A G G+ L ++ + I PN Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSEGDGKGKGIGE 212 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K + S D + +G ++ GG Sbjct: 213 IYASAAQKINEDDVRRIAEYTDLPVIVKGIQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ + I G+R G + K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKQVPIIFDSGIRRGSHVFKALASGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ + V + E + E + M L GTK ++++ Sbjct: 313 DLVAFGRPVIYGLALGGAQGVQSVFEQIDHELEIIMQLAGTKTIEDVKHAPL 364 >gi|145332395|ref|NP_001078154.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332642001|gb|AEE75522.1| putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] Length = 360 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 113/352 (32%), Gaps = 98/352 (27%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISS-------------------------MT 65 R L I ++D + LG K+S P++++ MT Sbjct: 40 FRPRIL--IDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMT 97 Query: 66 GGNNKMI----------------------ERINRNLAIAAEKTK---VAMAVGSQRVMFS 100 + + L AE+ +A+ V + R+ Sbjct: 98 LSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRR 157 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 + + F L P + + N + L + GL + Sbjct: 158 ESDIKNRFTL----PPNLTLKNFEGLDLGK----------MDEANDSGLA-------SYV 196 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + L + +P+L+K V L+ D + +++G ++ G Sbjct: 197 AGQIDRTLSW--KDVQWLQTITKLPILVKGV---LTGEDARIAIQAGAAGIIVSNHGARQ 251 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + T +LE + GG+R G D+ K++ L Sbjct: 252 LDYVPA------------------TISALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 293 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 GAS + P + A + V ++ LR EF ++M L G + ++E+ N Sbjct: 294 GASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRN 345 >gi|218458514|ref|ZP_03498605.1| isopentenyl pyrophosphate isomerase [Rhizobium etli Kim 5] Length = 144 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Query: 2 VNDRKIDHINIVCKDPGI-DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 + RK DH+++V ++ H ALPE+ +++ LGK + PLL Sbjct: 39 LTRRKDDHLDLVLDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPMRAPLL 98 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 ISSMTGG + E INR L+ AA+ +AM VGSQRV N+ Sbjct: 99 ISSMTGGMPRA-EAINRRLSEAAQALGIAMCVGSQRVSLQSRNSQG 143 >gi|290473702|ref|YP_003466574.1| L-lactate dehydrogenase, FMN-linked [Xenorhabdus bovienii SS-2004] gi|289173007|emb|CBJ79780.1| L-lactate dehydrogenase, FMN-linked [Xenorhabdus bovienii SS-2004] Length = 380 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 119/375 (31%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + E++ G+K++ P+ ++ + G + Sbjct: 29 AYAEHTLKRNTEDLSNIELRQRVLK--NMSELNLETRLFGEKMAMPVALAPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIK---SFELRQYAPHTVLISNLGAVQ 127 R A AA K + + + + +AI F+L + + L Q Sbjct: 86 RRGEVQAARAAAKKGIPFTLSTVSVCPIEEVASAIDRPIWFQLYVLKDRGFMHNVLERAQ 145 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 GV+ V + A N LQ I P Sbjct: 146 AA---GVKNLVFTVDMPIPGARYRDAHSGMSGPNASMRQILQAITHPQWAWDVGLMGKPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 ++ + + P++LK + L D Sbjct: 203 DLGNISAYRGIPTKLKDYIGWLGNNFDPSISWKDLEWIRDFWKGPMILKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 + ++ G ++ GG + + T +L +A N+ Sbjct: 260 KDAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVKNDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + G+R G+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 302 TILTDSGIRTGLDVVRMLALGADSVLLGRAFVYALAAAGEAGVSNLLDLIDKEMRVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ N + Sbjct: 362 TGAKSIAEINSNLLV 376 >gi|227832623|ref|YP_002834330.1| L-lactate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] gi|262182892|ref|ZP_06042313.1| L-lactate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] gi|227453639|gb|ACP32392.1| L-lactate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] Length = 422 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 91/382 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++ FF D L+ L + ++ S E G+ + P I+ TG M Sbjct: 60 ARDEVSYRESRDFFRDVRLMPNVLNGAN--DISLSTEIAGEPAALPFGIAP-TGFTRFMH 116 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV--QLNY 130 + AA + + + + + + + A N G QL Sbjct: 117 AEGEDAGSQAARDAGIPFTL----------STMGTRSVEEVAASQ---GNSGRRWFQLYL 163 Query: 131 DFGVQKAHQAVHVLGA---DGLFLHLN---PLQEIIQPNGNTNFA--------------- 169 + + A D L + ++ Q + Sbjct: 164 WKDHSACQELIERAAANGYDTLVVTVDTPVAGQRLRDTRNGMRIPPRLTAGTVFDAAWRP 223 Query: 170 -DLSS-----------------KIALLSSAMDVP--------LLLKE------VGCGLSS 197 + + L + M P + K+ V ++ Sbjct: 224 EWWFNFLTTDPVTFASLTSTTGTLGELVNTMFDPGLNFEDLAWIRKQWTGKLFVKGIVNP 283 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YC 256 D + G ++ GG R+ + T +LE R Sbjct: 284 EDARKVIDLGADGIVVSSHGGRQLDRVVN------------------TLQALEAVRAEVG 325 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVS 315 + + I G+ +GVDI ++ LGA + +L M + V IE L +EF + Sbjct: 326 PDVEIIYDSGIMSGVDIAIALSLGADFVLIGRAYLYGLMAGGKEGVDRVIELLAEEFKNT 385 Query: 316 MFLLGTKRVQELYLNTALIRHQ 337 + LLG K++++L + + Sbjct: 386 LQLLGVKKIEDLSRQHVVTPWE 407 >gi|259494987|sp|C3K053|LLDD_PSEFS RecName: Full=L-lactate dehydrogenase [cytochrome] Length = 380 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 120/381 (31%), Gaps = 85/381 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N + L R L + D + G++L P+++S + TG + Sbjct: 29 AYAEHTMRANSSDLAEISLRQRIL--RNVDNLSLKTTVFGQELDMPVILSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGA 125 E A AA V + + V + A +S F+L + A Sbjct: 87 RGEV---QAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHVL--GADGLFLH------------------------------- 152 ++ GV V + GA H Sbjct: 141 LERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGR 200 Query: 153 ----LNPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 N + + +P ++ + + + P+++K + L Sbjct: 201 PHDLGNISKYLGKPTHLEDYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGI---LDPQ 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCN 257 D + + G ++ GG + + T +L +A + Sbjct: 258 DAKDAVSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIADAVGD 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + G+R+G+D+++ + LGA L A D + V ++ KE V+M Sbjct: 300 DLTVLVDSGIRSGLDVVRMLALGAKACLLGRASAYALAADGQNGVENLLDIFAKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTALIRHQ 337 L G ++++ T + + Q Sbjct: 360 TLTGVTSIEQIDHTTLVGQRQ 380 >gi|254228762|ref|ZP_04922185.1| L-lactate dehydrogenase (cytochrome) [Vibrio sp. Ex25] gi|262396518|ref|YP_003288371.1| L-lactate dehydrogenase [Vibrio sp. Ex25] gi|269965376|ref|ZP_06179496.1| L-lactate dehydrogenase [Vibrio alginolyticus 40B] gi|151938709|gb|EDN57544.1| L-lactate dehydrogenase (cytochrome) [Vibrio sp. Ex25] gi|262340112|gb|ACY53906.1| L-lactate dehydrogenase [Vibrio sp. Ex25] gi|269830022|gb|EEZ84251.1| L-lactate dehydrogenase [Vibrio alginolyticus 40B] Length = 379 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + RN D L R L ++ E G+KL+ P+ ++ + TG + Sbjct: 31 DERTLKRNTDDLGDVALRQRVL--RDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRG 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISN 122 E A AAEK + + + + + L R + + + + Sbjct: 89 EV---QAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAK 145 Query: 123 LGAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP-------------- 162 V D V A + G + + Q + P Sbjct: 146 AAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--FQAMRHPSWALDVGLLGKPHD 203 Query: 163 -------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D + Sbjct: 204 LGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPSIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 G+R G+D+++ + LGA L F+ A V ++ KE V+M L Sbjct: 303 IFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G K + +L ++ + Sbjct: 363 GAKSIADLSRDSLV 376 >gi|190347534|gb|EDK39821.2| hypothetical protein PGUG_03919 [Meyerozyma guilliermondii ATCC 6260] Length = 273 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 18/168 (10%) Query: 163 NGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 NG T++ I + + ++P+ LK + G D+ L + GI ++ GG Sbjct: 79 NGKTDYPSNLSWKHIERIRACTNIPIALKGIQRG---EDVVLAAEKGISGVVLSNHGGRQ 135 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++ S+ + ++ G+ N+ + GG+R G DI+K++ LG Sbjct: 136 LDFSRPPLEVLSEAKQMLKERGLD------------NKIEIYIDGGIRRGSDIVKALCLG 183 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL PFL A + V+ + L E +M LLG +++L Sbjct: 184 ATGVGLGRPFLYAMAGYGEEGVLKLVSLLEGEVKNNMKLLGVDNIKDL 231 >gi|226291284|gb|EEH46712.1| peroxisomal (S)-2-hydroxy-acid oxidase [Paracoccidioides brasiliensis Pb18] Length = 406 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 70/378 (18%), Positives = 125/378 (33%), Gaps = 88/378 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SM---TGG 67 ++ + RN+ FD L R L VD S G+K P+ IS +M GG Sbjct: 42 ADEENALRRNRGAFDRLILRPRVL--RDVSRVDTSTTLFGEKYLIPIGISPSAMQRLAGG 99 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIKS----FEL-------- 110 N ++ ++A AA M + S + + S F+L Sbjct: 100 NGEI------DMARAAASRGTTMILSSHTTCALEDVIRAPDGGSSVDFWFQLYISQNRER 153 Query: 111 ------RQYAP---------HTVLISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLF 150 R A T ++ N A+ L + HQ ++ ++G Sbjct: 154 CAQVIGRAEAAGYKALVLTVDTPILGNRINERKTALILPPHLSLANLHQTINQSSSEGNS 213 Query: 151 LHLNP-----------LQEIIQ-PNGNTNFAD-----LSSKIALLSSAMDVPLLLKEVGC 193 P QE + G+ + + S+ I+ L S + ++LK + Sbjct: 214 PQAKPTMNRVLLEARNAQEAAKIARGSHDTLNDASLTWSNTISWLRSKSSLKIILKGI-- 271 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 +++ D L + G ++ GG + S + +I Sbjct: 272 -MTAEDALLAIDYGADAVIVSNHGGRQLDSVSSTIEALPEI-----------------VS 313 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEF 312 I G+ G D+ K++ LGA + L + V+ ++ L +E Sbjct: 314 AVRGRIPVIIDSGITRGSDVFKALALGADFTLVGRSALWGLSFGGQEGVIRVLDILEREL 373 Query: 313 IVSMFLLGTKRVQELYLN 330 +M L G V E+ + Sbjct: 374 SRTMALAGAGTVGEIRRS 391 >gi|332286899|ref|YP_004418810.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pusillimonas sp. T7-7] gi|330430852|gb|AEC22186.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pusillimonas sp. T7-7] Length = 361 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 123/349 (35%), Gaps = 57/349 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 RN++ F D L R L S + +++ G L +P+LI+ + K+ Sbjct: 34 AADQYTFARNQQAFADIQLSPRHL--CSMQGGNTALDLFGATLDYPILIAPVA--YQKLA 89 Query: 73 ERINRNL-AIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLG-- 124 A+AA + M V + + +H A S F+L A ++ + Sbjct: 90 HPEGEQASALAASAMRAGMVVSTLSSLSLEHIAQASSAPLWFQLYLQADQADSLTLIRRA 149 Query: 125 ------AVQLNYDFGVQKAHQAVHVLGADGLFLHLN---------PLQEIIQPNG----- 164 A+ + D + A H G L H++ P Q + G Sbjct: 150 EAAGYRALVITVDAALNGCRNAEHRAGF-ALPSHISAVNLCGRPMPAQGLSVAAGASLFQ 208 Query: 165 NTNFADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + + L I +P+L+K + LS D + +G ++ GG Sbjct: 209 SPHISGLHDWSDIEWAIEQTRLPVLIKGI---LSPHDASRAILAGAAGLIVSNHGGRVLD 265 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 PT +L + GG+R G D+LK++ LGA Sbjct: 266 TTP------------------PTINALPSIISVAGSTPVLLDGGIRRGTDVLKALALGAK 307 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L P + A++ V + +R EF ++M G + + ++ + Sbjct: 308 AVMLGRPIIHGLAVNGPSGVAHVLHIIRTEFEMAMVQCGCRTLADIDHS 356 >gi|156351422|ref|XP_001622504.1| predicted protein [Nematostella vectensis] gi|156209060|gb|EDO30404.1| predicted protein [Nematostella vectensis] Length = 351 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 124/340 (36%), Gaps = 38/340 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I+ NK+ F L R L I +VD LG+ +S P+ I+ T + Sbjct: 31 ADEARTIEENKEGFRRIKLRPRMLRGI--SDVDMRTTILGQPISMPICIAP-TVVHRHAH 87 Query: 73 --ERINRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFEL-----RQYAPHTVLIS 121 I A A T +A+ + + + V ++ A+K F + R+ V + Sbjct: 88 PDGEIATVKAAGAADTCMALTIWTTTTLEEVAAAEPQALKWFLIYHLKEREQLTSLVRRA 147 Query: 122 N---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 A+ L D L Q + + + + + L Sbjct: 148 EKAGYKALVLVADAPDGGIPYHRSSKRNGRLLTKGKGPQLVHMEHCQIDPSVSWESVYWL 207 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S +P++LK + L+ D L ++ G+ ++ GG +++ D +I Sbjct: 208 KSFTKLPIVLKGI---LTPEDARLAVEHGVDGIIVSNHGGRQLDGVQATIDALPEI---- 260 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDS 297 + + + GG+R G D+ K++ LGA + P A Sbjct: 261 -------------VKAVQGKLEVYMDGGVRLGTDVFKALALGARAVFIGRPVIWGLAYKG 307 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V +E LR+E ++M L G + ++ + + +Q Sbjct: 308 EEGVRQVLELLREELRLAMILSGCGSLDDVTSSYVIPANQ 347 >gi|302896220|ref|XP_003046990.1| hypothetical protein NECHADRAFT_45968 [Nectria haematococca mpVI 77-13-4] gi|256727918|gb|EEU41277.1| hypothetical protein NECHADRAFT_45968 [Nectria haematococca mpVI 77-13-4] Length = 408 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 107/347 (30%), Gaps = 73/347 (21%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 +++N++ L R L + V + LG P ++ + + Sbjct: 64 VNKNRELIRRVMLRPRIL--RNVSSVRIDRKILGLDSRAPFIMCPAA---MATLAHPDGE 118 Query: 79 LA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 L AA + + S + AP V N ++ Sbjct: 119 LGWSRAAASEGIFEIISSNASYSLP-------SIIAAAPPGHPFFLQLYVNSNRPKTIEL 171 Query: 137 AHQAVHVLGADGLFLHLNPL------------------QEIIQPNGNTNFADL------- 171 +A LG +F+ ++ E+ + + Sbjct: 172 LRRA-RSLGIKAIFVTVDAPVPGKREADERAAQDVVIKSEMSGSESSKDNKGSGLGRLMG 230 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + VP++LK V + D++L ++ G+ ++ GG S Sbjct: 231 QYIDKSLNWEDLKWIREESSVPIVLKGVQ---TVEDVKLAVEYGVDGVMLSNHGGRSLDG 287 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIIL 279 ++ + L L R E + GG G DILK+I L Sbjct: 288 AQA------------------SILILLEVRKRFPEAFQHLEIFIDGGFERGSDILKAIAL 329 Query: 280 GASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 GA+ G+A PFL + V + L+ E S+ L G + + Sbjct: 330 GATAVGIARPFLYSLVYGQKGVEHLSQILKDELETSLRLAGLTSLDQ 376 >gi|256393990|ref|YP_003115554.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] gi|256360216|gb|ACU73713.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] Length = 440 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 115/369 (31%), Gaps = 74/369 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + RN+ F + R P VD LG+++ P +S + G +M Sbjct: 56 QHTLHRNRAAFGSYTFRPRQ-PR-DVSGVDTGTTVLGQRIPLPFALSPV--GAPRMFHHD 111 Query: 76 NR-NLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSFEL-----RQYAPHTVLISNLG 124 +A AA + + S + ++ F+L R + V + Sbjct: 112 GELAVARAARDAGIPYGISTLANTSVEDVAEQTDSPLWFQLYIWGDRSKSKEAVARAKAA 171 Query: 125 AVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD----------- 170 Q +N D V+ + L PL+ + + + +A Sbjct: 172 GYQALLVNIDTSVRS-ERIPEKHSGLVLPSPQLPLKTLFEGALHPAWAWNFLTSPTVSFP 230 Query: 171 ---------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 + + D P++LK V + + G+ Sbjct: 231 NIGPPDQRSLEVMSDMFDGTVCWDDLDWIRRIWDGPIVLKGVT---TVEQAREAVDHGLD 287 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG R+ + D+ +I + + + G R+ Sbjct: 288 AVIVSNHGGRQLDRLPATIDVLPEIAD-----------------AVGDRVEVLVDSGFRS 330 Query: 270 GVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G DI ++ LGA + L A V ++ L +E ++M L G + + EL Sbjct: 331 GGDIATALALGAKAVLVGRAHLYGLAAAGEAGVRHCVDILARELRMTMQLNGARNIAEL- 389 Query: 329 LNTALIRHQ 337 + LI + Sbjct: 390 -DRGLIHRR 397 >gi|319654297|ref|ZP_08008385.1| hypothetical protein HMPREF1013_05005 [Bacillus sp. 2_A_57_CT2] gi|317393997|gb|EFV74747.1| hypothetical protein HMPREF1013_05005 [Bacillus sp. 2_A_57_CT2] Length = 369 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 125/355 (35%), Gaps = 66/355 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + +N + F + ++ R L ++S D SV GK +P+ ++ + + +E Sbjct: 43 EETLKKNIESFAKYSIVPRMLRDVSV--PDISVNLFGKTYPYPVFLAPI---GMQRLEHS 97 Query: 76 NRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-----LGAVQL 128 LA AA + + + A + ++ + SN V+ Sbjct: 98 EGELASARAAASFGIPFIQSTVSSYSIEEIANATGTSPKWFQ--LYWSNYEDTAFSMVRR 155 Query: 129 NYDFGVQKAHQAVHVL-------------------------GADGLF---LH-LNPLQEI 159 + G + V + +D +F LH + +Q I Sbjct: 156 AEESGYEAIVLTVDTVMMGWREADLRNNFSPLKLGYGKANYESDPVFMATLHDGDVVQGI 215 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + IA L ++P+LLK + L D L ++ GI ++ GG Sbjct: 216 L--DNIHHPTLSWEHIARLKEKTNLPILLKGI---LHPEDARLAVEKGIDGIIVSNHGGR 270 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + D + + + G+R G D++K++ L Sbjct: 271 QLDGVIAAIDALGPV-----------------VKEVKGRIPVLFDSGIRRGSDVVKALAL 313 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GA L P++ A+ + V + + +E VS+ L G ++E+ L Sbjct: 314 GADAVCLGRPYVYGLAIGGQNGVEKVLANFIEETKVSLSLAGVGSLKEMASLKLL 368 >gi|147672249|ref|YP_001215095.1| L-lactate dehydrogenase [Vibrio cholerae O395] gi|262169240|ref|ZP_06036933.1| L-lactate dehydrogenase [Vibrio cholerae RC27] gi|146314632|gb|ABQ19172.1| L-lactate dehydrogenase [Vibrio cholerae O395] gi|227015629|gb|ACP11838.1| L-lactate dehydrogenase [Vibrio cholerae O395] gi|262022521|gb|EEY41229.1| L-lactate dehydrogenase [Vibrio cholerae RC27] Length = 378 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMAHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V +E KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRTGVENLLELYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|302908375|ref|XP_003049853.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730789|gb|EEU44140.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 369 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 108/334 (32%), Gaps = 39/334 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F + R + +I+ E LG S P IS GN Sbjct: 58 AAGEFSYRNNLEVFHRYRFKPRVMVDITNVESTLPTTILGHNFSAPFFISPCARAGNAHP 117 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 +N A + + + A + + L SN D Sbjct: 118 DAELN--FVKGAAEGDILYMPALYASRTIEEIAAAKAKGQVVFQQLYLTSN--------D 167 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIALLSSAM 182 Q+ GAD L ++ + + L Sbjct: 168 TETQELFDRSKKAGADALVFTVDSAADGNRHRAARFGVGSADSDYSYITWDYYKKLQKMT 227 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D+P+++K +G S+ D +L +K G ++ GG S ++ +I Sbjct: 228 DLPIIIKGIG---SAKDAQLAVKHGAPAIILSNHGGRQLDGSPSGLEVALEIH------- 277 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 E + + + A GG+R G D+LK + LG GL PF+ + D V Sbjct: 278 -------EESPEVFKKIEVYADGGVRYGADVLKLLSLGVKAVGLGRPFMYANVFGVDGVK 330 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I+ L+ E + LG + +N + ++ Sbjct: 331 KVIDILKHEIAIDAGNLGVPDIH--KINPSYVKW 362 >gi|190574813|ref|YP_001972658.1| putative L-lactate dehydrogenase [Stenotrophomonas maltophilia K279a] gi|259491776|sp|B2FIJ0|LLDD_STRMK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|190012735|emb|CAQ46364.1| putative L-lactate dehydrogenase [Stenotrophomonas maltophilia K279a] Length = 379 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 120/376 (31%), Gaps = 83/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLKRNVSDLSDIALRQRIL--RNMSDLSLETELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN----------- 163 Q D V A + G + + Q I P+ Sbjct: 144 AQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRI--GQAITHPHWAWDVGLFGRP 201 Query: 164 --------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G ++ + + P+++K + L D Sbjct: 202 HDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGI---LDPDD 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 ++ G ++ GG + + T +L +A + Sbjct: 259 ARDAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVQGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 + +A G+R G+D+++ + LGA L F+ A V ++ + KE V+M Sbjct: 301 LKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTAL 333 L G +R+ ++ ++ + Sbjct: 361 LTGARRIADIGRDSLV 376 >gi|270159010|ref|ZP_06187666.1| L-lactate dehydrogenase [Legionella longbeachae D-4968] gi|289166152|ref|YP_003456290.1| FMN-dependent dehydrogenase [Legionella longbeachae NSW150] gi|269987349|gb|EEZ93604.1| L-lactate dehydrogenase [Legionella longbeachae D-4968] gi|288859325|emb|CBJ13260.1| putative FMN-dependent dehydrogenase [Legionella longbeachae NSW150] Length = 353 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 131/349 (37%), Gaps = 49/349 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 C + N+K FD+ L L VD S + L +LS PLLI+ T + + Sbjct: 29 ACDEITKRNNRKAFDNISLRPLCL--RDVSTVDLSTKILNDELSIPLLIAP-TAFHQLVD 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLI- 120 +R + A AA+ + M V S + + A S F+ R + Sbjct: 86 QRGEVSTAKAAKSCGIPMIVSSMSNVALEDIATYSNNESLWLQIYIFKNRALTQELIQRA 145 Query: 121 --SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL------NPLQEIIQPN---GNTNFA 169 +N A+ + + + V L HL + + + + N + + Sbjct: 146 ENANYKAILITVGAPI-TGKRDRDVRNQFVLPSHLTTGNFKSAVSDQVLYNFTAHELDPS 204 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I + S +P++LK + L+ +D + + + ++ GG ++ Sbjct: 205 VTWNDIEWVQSLTRLPVILKGI---LNPLDADKACQLKVSGLVVSNHGGRQLDTAQATIT 261 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + DI + + GG++ G D+ K++ LGA L Sbjct: 262 VLPDI-----------------VKVVAGRTLVLMDGGIQRGTDMFKALALGADALLLGRA 304 Query: 290 FLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY-LNTALIRH 336 L A+D V + + LR+EF M L G + +QE+ LN + ++ Sbjct: 305 VLWALAVDGEQGVHSMLTLLREEFEAVMKLTGCRTLQEMRDLNQYICKY 353 >gi|71003179|ref|XP_756270.1| hypothetical protein UM00123.1 [Ustilago maydis 521] gi|46096275|gb|EAK81508.1| hypothetical protein UM00123.1 [Ustilago maydis 521] Length = 583 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 122/350 (34%), Gaps = 61/350 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-----GKKLSFPLLIS--SMT 65 + +N+ F+ R L I +VD SV+ L G S P+ +S +M Sbjct: 234 ADDEITKAQNRASFNRIVFRPRVLRAIG--QVDSSVKLLDSNGKGFTCSIPVYVSPAAMA 291 Query: 66 -GGNNKMIERINRNLAIAAEKTKVA----MAVGSQRVMFSD--HNAIKSFELRQYAPHTV 118 G+ + R A ++ + + D + + + A Sbjct: 292 KLGHPDGELNLTRGAGDAEIIQGISANASVGLDEMLDARKDGQPVIYQLYVNKDRAASER 351 Query: 119 LISNL-----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLN--------------PLQEI 159 ++ + AV L D V + + + + + +N + Sbjct: 352 ILEKVEARGVSAVMLTVDAPVMGKRERDRRVKGEEVEMGVNHGKDVKKKGGGVAEAISGY 411 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 I+PN I +PL LK + + D+EL +K G+ ++ GG Sbjct: 412 IEPNLT------WDDIKWFRKTCKLPLYLKGIQ---TVEDVELAVKHGVEGVVLSNHGGR 462 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSII 278 S + D+ + L RP ++ + GG+R G D+LK++ Sbjct: 463 SLEYAPAALDVLVE---------------LRQRRPDLFDKIEVFMDGGVRRGTDVLKAVA 507 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA GL FL + V AI+ L+ E M LLG + +L Sbjct: 508 LGAKAVGLGRSFLFAQSGYGQAGVTRAIQILQDEIHRGMQLLGVSSLDQL 557 >gi|195427008|ref|XP_002061571.1| GK20637 [Drosophila willistoni] gi|194157656|gb|EDW72557.1| GK20637 [Drosophila willistoni] Length = 365 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 125/357 (35%), Gaps = 64/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F L R L ++D + LG+++ +PL I+ + + Sbjct: 29 AGEQFTLSLNREAFRKLRLRPRCL--RDVSKLDVGCKILGEQMKWPLGIAPTA---MQKM 83 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFELRQYAPHTV------ 118 + + A AA K + + D + +K F+L Y ++ Sbjct: 84 AHPDGEIGNARAAGKAGSIFILSTLSTTSLEDLAAGAPDTVKWFQLYIYKDRSITEKLVR 143 Query: 119 --LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------------NPLQ 157 +N A+ L D + +A V L HL + + Sbjct: 144 RAEKANFKALVLTIDAPIFGHRRA-DVRNNFSLPSHLTLANFQGVKATGVVTATGASGIN 202 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 E + + I L S +P+++K + L++ D L + G ++ G Sbjct: 203 EYVSSQFDPTITW--QDIKWLKSITQLPIVVKGI---LTAEDAVLAKEFGCSGVIVSNHG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 + + + ++ R N+ + GG+ G DI K++ Sbjct: 258 ARQIDTVPASIEALPEV-----------------VRAVGNDLLVMMDGGVLQGNDIFKAL 300 Query: 278 ILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + P A + V + LRK+F ++M L+G + +++ + + Sbjct: 301 ALGAKTVFIGRPAVWALAYNGQKGVEEMLSVLRKDFEITMALIGCQSFKDIQSSMVI 357 >gi|120555256|ref|YP_959607.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinobacter aquaeolei VT8] gi|120325105|gb|ABM19420.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinobacter aquaeolei VT8] Length = 395 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 118/374 (31%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF-----PLLISSMTG- 66 ++ + N + + D L R L I D VD E G+ S PL ++ M Sbjct: 32 ATEEHTLRANVRGWQDIALRQRVL--IDVDNVDTRTELAGQSCSMPVALAPLGLAGMMAQ 89 Query: 67 -GNNKMIERINRN-------------LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 G + ++ N LA Q M D +++ L++ Sbjct: 90 RGEAQAVKAANSAEVPFTLSTVGICPLAEVKAAATAPFWF--QLYMIRDRGYVENL-LKK 146 Query: 113 YAPHT--VLISNL-----GAVQLNYDFGVQKAHQAVHVLGADGL----------FLHLNP 155 LI + G + G+ A L A L + P Sbjct: 147 AWDSGCQTLIFTIDLPLPGPRHRDTRNGLNSAGARSVALKAQQLLPRPGWLWQVAIKGKP 206 Query: 156 L------QEIIQPNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMD 199 L + + + +F I L L+LK + L D Sbjct: 207 LTFGNLSDAVPEASNLDSFKQWVDTQFDASVTWQAIEWLRERWPGKLILKGI---LEVDD 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + + G ++ GG + + DI N+ Sbjct: 264 AKAAVNVGADGIVVSNHGGRQLDGVAATARKLPDI-----------------VAAAGNDT 306 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + + GG+RNGVD+ +++ LGA+ + P+ A + + + + ++E ++M L Sbjct: 307 EILVDGGIRNGVDVFRALALGANGVMIGRPWAWALAAEGQAGLTRLLNTWQQELKLAMTL 366 Query: 319 LGTKRVQELYLNTA 332 G R+ ++ Sbjct: 367 TGVTRIADINETHL 380 >gi|262368653|ref|ZP_06061982.1| L-lactate dehydrogenase [Acinetobacter johnsonii SH046] gi|262316331|gb|EEY97369.1| L-lactate dehydrogenase [Acinetobacter johnsonii SH046] Length = 384 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 59/377 (15%), Positives = 124/377 (32%), Gaps = 78/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L ++ + + LS P+ +S + TG + Sbjct: 29 AYAEYTLKRNVEDLSKIALRQRVL--NDMSQLSLETKLFDETLSMPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A+AA+K + + + V + A F+L R + + + Sbjct: 87 RGEV---QAAVAADKKGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMKNALER 143 Query: 121 SNL---------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 + GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSCFHPHWAWNVGMMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 ++ G ++ GG + S I + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 +A G+RNG+D+++ + LGA L F+ + V ++ + KE V+M L G Sbjct: 304 LADSGIRNGLDVVRMLALGADTCMLGRAFVYALGAAGGEGVSNLLDLIDKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTALIRHQ 337 K + ++ + L++ + Sbjct: 364 AKTIADI-TSDCLVKLE 379 >gi|191639282|ref|YP_001988448.1| NAD-independent L-lactate dehydrogenase [Lactobacillus casei BL23] gi|190713584|emb|CAQ67590.1| NAD-independent L-lactate dehydrogenase [Lactobacillus casei BL23] gi|327383364|gb|AEA54840.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus casei LC2W] gi|327386549|gb|AEA58023.1| hypothetical protein LCBD_2528 [Lactobacillus casei BD-II] Length = 371 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 67/352 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D + N K F+ ++ +AL I D + S FLG L P++++ + Sbjct: 46 DDWTLAENTKAFNHAQIVPKALSNI--DSPNLSTNFLGIDLKTPIMMAPTA------AQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + VA G + +S + + AP + + ++DF Sbjct: 98 LAHSQGEKDTARGVAAVGGLMAQSTYSSTSIADTAAAGNGAPQLFQL----YMSKDWDFN 153 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE--------------IIQPNGNTNFAD--------- 170 +A G G+ L ++ + I PN A Sbjct: 154 KSLLDEA-KKAGVKGIILTVDATVDGYREEDIINNFQFPIPMPNLEKYSAGDGKGKGIGE 212 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ D+P+++K V S D + +G ++ GG Sbjct: 213 IYASAAQKISEDDVRRIAEYTDLPVIVKGVQ---SPEDALRAIGAGAAAIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ I A+ I G+R G K++ GA Sbjct: 270 NGGPASFDVLPAI-----------------AKAVNKRVPIIFDSGVRRGSHAFKALAAGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L P + A+ ++ V + E + E + M L GTK + ++ Sbjct: 313 DLVAFGRPVIYGLALGGAEGVQSVFEQIDHELEIIMQLAGTKTIVDVKHAPL 364 >gi|262369928|ref|ZP_06063255.1| glycolate oxidase [Acinetobacter johnsonii SH046] gi|262314967|gb|EEY96007.1| glycolate oxidase [Acinetobacter johnsonii SH046] Length = 372 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 129/356 (36%), Gaps = 78/356 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + HLI R L + + S E LG+ P+ ++ + G+ + Sbjct: 47 AMDEISVRNNLAQFQNLHLIPRML--RDLTQGNTSCEILGQIFPHPIFVAPI--GHQQQF 102 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV----------MFSDHNAIKSFELR----------- 111 A A +GS + F N K F+L Sbjct: 103 HS-----EAEAATALAAEVLGSNMILSTFTNTDMRTFKPENPYKWFQLYWQGDRDKSLAL 157 Query: 112 ---------------QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 +PHT + + +Q H H + L L Sbjct: 158 LKLAEAQHFTAIVITVDSPHTGIRDRERRAFFHLPENMQHPHTPAH--------IPLPEL 209 Query: 157 QEIIQP--NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 QE P NG A IA + D+P+LLK + +S +D +L ++ GI+ ++ Sbjct: 210 QEGDHPVFNGLMKIAPTWDDIAWMVQQTDLPILLKGI---VSPLDAQLAIQHGIQGLIVS 266 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDI 273 GG D IP +L++ + + + GG+R G D+ Sbjct: 267 NHGGRVL------------------DTCIPPLKALQLIKKAVPHDFPLLYDGGVRRGSDV 308 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 K+I LGAS + P + A + V ++ L++EF ++M L+GT + ++ Sbjct: 309 FKAIALGASAVLVGRPCIYGLATAGALGVAHVLKILKEEFEITMALMGTATLADIQ 364 >gi|260467085|ref|ZP_05813264.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] gi|259029097|gb|EEW30394.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] Length = 382 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 70/390 (17%), Positives = 121/390 (31%), Gaps = 79/390 (20%) Query: 2 VNDRKI-----DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 + RK+ ++I+ D RN F+ L+ L E+D SV +G+KL Sbjct: 16 MAQRKLPGPIFNYIDGAADDEVTYRRNTASFESCDLVPNVLRG--VSEIDMSVTVMGQKL 73 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI--KSFELRQY 113 + P S T + R +A AA K V + + + S ++ Q+ Sbjct: 74 AMPFYCSP-TALQRLFHHQGERAVAKAAAKYGTMFGVSTLGTVSLEEVRRISGSPQIYQF 132 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLG--------------------ADGLFLHL 153 H N +Q GV+ V + A L Sbjct: 133 YFHRDRGLNRAMIQRAKQVGVEVMMLTVDSITGGNRERDKRTGFAIPFKLNLAGMAQFAL 192 Query: 154 NP----------------LQEIIQPNG-----NTNFADLSS------KIALLSSAMDVPL 186 P L E + G + F ++ +A + Sbjct: 193 KPAWAVNYFTHEGFKLPQLDEHVDMGGGTMSISRYFTEMLDPSMTWDDVAEMVRQWSGAF 252 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 LK + +S D + G ++ GG + D +++ Sbjct: 253 CLKGI---MSVEDARRAVDIGCSGIVLSNHGGRQLDGSRAAFDQLAEV------------ 297 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAI 305 ++ I GG++ G +LK++ LGA G+ A V A+ Sbjct: 298 -----VDAVGDKIDVIMDGGVQRGTHVLKALSLGAKAVGIGRYYMFPLAAAGQPGVERAL 352 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 E +R E M L+G + +L + R Sbjct: 353 EQMRVEVERGMKLMGCSSIGQLSRSNLRFR 382 >gi|302830434|ref|XP_002946783.1| hypothetical protein VOLCADRAFT_56216 [Volvox carteri f. nagariensis] gi|300267827|gb|EFJ52009.1| hypothetical protein VOLCADRAFT_56216 [Volvox carteri f. nagariensis] Length = 392 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 120/365 (32%), Gaps = 97/365 (26%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--------G---- 66 + N+ F + L+ R L + VD S E G + S P+ ++ M G Sbjct: 58 VVENRTCFARYKLLPRML--RNVSRVDTSHEVFGIRSSMPVWVAPMAMHGLADPQGREVA 115 Query: 67 ----------------------------GNNKMIERI----NRNL-------AIAAEKTK 87 G++ I ++ NR++ A Sbjct: 116 TCRAAAASAVPFTFSTVATASFEEIQVTGHSAAIFQLYVIRNRDVVRRWVTEAEVRGFKA 175 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 + + V +QR+ + + F L P + + NL + QA Sbjct: 176 LMVTVDAQRLGNREADERNKFTL----PAGLALRNLEYLSTGSTA------QARDSADGS 225 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 GL + + + I L S +P++ K + LS D EL ++ G Sbjct: 226 GLM-------RLFAAEIDDSLTW--DFIPWLRSITKLPIIAKGL---LSPDDAELAVQYG 273 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + ++ GG S ++ + + GG+ Sbjct: 274 VDGIVVSNHGGRQLDFAPSGLEMLPAV-----------------VAAVRGRVPVLVDGGI 316 Query: 268 RNGVDILK----SIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 R G D++K ++ LGAS L P L A V ++ LRKE +SM L G Sbjct: 317 RRGTDVIKASMEALALGASAVLLGRPVLYGLAVGRQAGVERVLQLLRKEIELSMALTGCA 376 Query: 323 RVQEL 327 ++++ Sbjct: 377 CLRDI 381 >gi|224371168|ref|YP_002605332.1| FMN-dependent dehydrogenase family protein (TIM barrel family protein) [Desulfobacterium autotrophicum HRM2] gi|223693885|gb|ACN17168.1| FMN-dependent dehydrogenase family protein (TIM barrel family protein) [Desulfobacterium autotrophicum HRM2] Length = 385 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 104/294 (35%), Gaps = 40/294 (13%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--GSQRVMFS 100 E D + FLG L FP++ +S G IER N ++ AV GSQ+ Sbjct: 114 EPDTRMNFLGIDLEFPVMAASTAG-----IERYNN----VVKEKDFCRAVVRGSQQAGTI 164 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-----VQKAHQAVHVLGADGLFLHLN- 154 F +P + + +++ G + + L+ Sbjct: 165 GWRGDTWFYTPDDSPALQALEQEKGYGIPIFKPRSQDVLKRLITMAEEAGCPAVGIDLDG 224 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I+ +G F ++I L +P + K + + D E ++G++ ++ Sbjct: 225 CGSTIMAKHGQPVFRKSVAEIKELVEFSSLPFIAKGI---MDPDDAEGCAEAGVKVVSVS 281 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDI 273 GG + T L +A+ + A GG+R G D+ Sbjct: 282 NHGGRVLDSVPG------------------TAEVLPLIAQRLNKQVLITADGGVRTGYDV 323 Query: 274 LKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK + LGA L ++ A+ V + + K ++F+ G K V++ Sbjct: 324 LKMLALGADAVLLGRDIIRAAVGGGSLGVKIHLTHIHKVLRKALFMTGLKNVKD 377 >gi|332372881|gb|AEE61582.1| unknown [Dendroctonus ponderosae] Length = 367 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 120/356 (33%), Gaps = 61/356 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 + +D N++ F + + R L ++S V S LG KL P+ IS +M + Sbjct: 30 AGRQETLDNNRRAFSKYKIRPRCLRDVSTRSV--STTALGAKLLMPVGISPSAMQRMAHP 87 Query: 71 MIERINRNLAIAAEKTKVAMAVGS-QRVMFSD-----HNAIKSFELRQYAPHTVLI---- 120 E N A AAE + + + IK F+L Y V I Sbjct: 88 EGECAN---ARAAESMGTIFILSTIATSSIEEVAEAAPKCIKWFQLYIYNDREVTINLVK 144 Query: 121 ----SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL------QEIIQPNGNTNFAD 170 + A+ L D + A + L HL + G + Sbjct: 145 RAEKAGFKALVLTVDTPMFGLRTA-DLRNKFKLPPHLKLANFEGENSAAVSLRGRKTGSA 203 Query: 171 L------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 L I L + +P++LK + L+S D L G+ ++ G Sbjct: 204 LNNLGELFDASLQWKDIEWLKTITHLPIVLKGI---LTSEDAVLAADHGVAGVLVSNHGA 260 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + + +I A+ + + GG+ +G D+ K++ Sbjct: 261 RQVDGWPASIEALPEI-----------------AKAVGHRLEVYMDGGISDGTDVFKALA 303 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA + + P L A + + L+ EF ++ + G ++++ + Sbjct: 304 LGARMVFIGRPALWGLACGGEEGTRKILNILKTEFEYALAISGCASLEDVRQCMVV 359 >gi|282856977|ref|ZP_06266228.1| L-lactate dehydrogenase (cytochrome) [Pyramidobacter piscolens W5455] gi|282585138|gb|EFB90455.1| L-lactate dehydrogenase (cytochrome) [Pyramidobacter piscolens W5455] Length = 361 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 46/319 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG-----NNKMIERI 75 RN + L+ L + D S EF G+ + P+ + + GG + + E Sbjct: 66 RNVAALAEVKLVLDTL--YADRGQDTSCEFFGRAFAMPVFAAPI-GGMKLNYASDLGEGA 122 Query: 76 N-RNLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 N + A A G A+ + + P + A+ Sbjct: 123 NGERVVKGAHAAGSAAFTGDSPDEAFYGPLEAIKALDGWGVPTIKPWAMKQ----ALARM 178 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 D A + A GL +++ E + P + L P ++K Sbjct: 179 ADAVAAGAMAVAMDVDAAGL-VNVKLRGESVYPKSVADLRVLVEAAG------KTPFIVK 231 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V +S+ L++G ++ GG +S ++ +I Sbjct: 232 GV---MSAKGALKALEAGCYGIVVSNHGGRVLDHAQSTVEVLPEI--------------- 273 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESL 308 A+ + GG+R+GVD+ K + LGA + P A + V ++ + Sbjct: 274 --AQAVNGRMKIFVDGGVRSGVDVFKMLALGADAVLIGRPVTMSAFGGGAEGVEIYLKKI 331 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + E +M + G + E+ Sbjct: 332 QSELAGTMLMTGAATLAEI 350 >gi|302416839|ref|XP_003006251.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261355667|gb|EEY18095.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 569 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 114/339 (33%), Gaps = 51/339 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMIERINRN 78 RN + + L R L + VD S L PL ++M + E+ Sbjct: 238 RNAEAYASITLRPRVLRQ--VATVDTSTTMLSHATRLPLFAPPTAMAKLVHPEGEK---A 292 Query: 79 LAIAAEKTKVAMAVG-SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 L A + + + V S +D A + + L A+ L D + + Sbjct: 293 LGRALKASGMPQTVSVSASYSLADILAAHATHDVATPYDVPVFFQLYALVLTVDAPLARQ 352 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNT------------NFADLSSKIALLSSAMD-V 184 + + +D P+ N + IA L + + Sbjct: 353 ARGTERVRSDESLAS--PISGAAAKNDARGGALGRIMGSYIDANVCWDDIAWLRRTVPGL 410 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LK + + MD + G+ ++ GG S + Sbjct: 411 PIVLKGIQ---TWMDAVRAAEHGVEAIIVSNHGGRSLDTSPA------------------ 449 Query: 245 TPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 T L L + C + + GG+ G DI K++ LGA G+ L ++ Sbjct: 450 TILVLLELQKNCPDVFDKMEVYVDGGVTRGTDIFKALCLGARGVGVGRGLLYALNYGTEG 509 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 V I+ LR E +M + G + +++ LNTA + H Sbjct: 510 VERYIDILRDELETTMKMCGVTSLDQVHPGYLNTAAVDH 548 >gi|295689168|ref|YP_003592861.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caulobacter segnis ATCC 21756] gi|295431071|gb|ADG10243.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caulobacter segnis ATCC 21756] Length = 378 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 115/371 (30%), Gaps = 79/371 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L +V + G S P++++ + G Sbjct: 29 AYAERTLQRNVSDLADIALRQRVLK--DVSKVSTATSLFGVDQSMPVVLAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R AA V + + + V D A S F+L R + ++ + Sbjct: 86 RRGECQAVRAASAKGVPLCLSTVSVCDVDEVAAASSRPLWFQLYVLRDRAFMRDLLVRAR 145 Query: 123 L-GAVQL--NYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 GA L D V A + G + + +Q + +P Sbjct: 146 EAGATALVFTVDMPVPGARYRDAHSGMSGPNAAARRI--VQAMFKPQWAWDVGVMGHPHT 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G +F + + PL++K V L D Sbjct: 204 LGNVAPVLGKTSGLEDFMGWLGANFDPSIQWKDLEWIRDLWKGPLIIKGV---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + G ++ GG + + + +L + + Sbjct: 261 AAAEIGADGVVVSNHGGRQLDGV------------------LSSARALPAIVDAVGDRLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A GG+R+G+D+++ + LGA L + A V ++ + KE V+M L Sbjct: 303 VLADGGVRSGLDVVRMLALGAKGVLLGRAAVYALAARGEAGVTQLLDLIEKEMRVAMALT 362 Query: 320 GTKRVQELYLN 330 G V E+ + Sbjct: 363 GVNAVSEIDRS 373 >gi|260905922|ref|ZP_05914244.1| putative L-lactate dehydrogenase [Brevibacterium linens BL2] Length = 412 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 111/361 (30%), Gaps = 70/361 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N++ F D L+ R L D + S G+ +S P I+ TG M Sbjct: 58 ALDEHTLRKNRQVFADVELLPRILHG--VDAPNTSTTIAGQDVSLPFGIAP-TGYTRMMH 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTV-------- 118 AA K + ++ + V + ++ + F+L + Sbjct: 115 SEGEIGGVRAATKAGIPFSLSTMGTRSIEEVAQAAPSSTRWFQLYLWKDRARSLDLLQRA 174 Query: 119 --------------------LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 L N + + ++ A + G FL P + Sbjct: 175 QASGYETLLVTVDTPITGQRLRDNRNGLSIPPKLTLKTIVDASYRPGWWFNFLTTEPPKY 234 Query: 159 II----------QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + + L +K V L++ D G Sbjct: 235 ASLSNTSQSLAEMTRTMFDPTLDLDDLKWIREQWQGKLFVKGV---LTAEDANRARSIGA 291 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGL 267 ++ GG R + +L R ++ + I G+ Sbjct: 292 DGLVVSNHGGRQLDRAPD------------------SLTALAEVRAAVGDDMELILDSGI 333 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQE 326 +G D++ ++ GA + +L M V AI+ ++ E + +M L+G + + + Sbjct: 334 MSGTDVVTALCAGADFVLIGRAYLYGLMAGGQRGVERAIDLIKAEILTAMGLMGARTIAD 393 Query: 327 L 327 L Sbjct: 394 L 394 >gi|302698461|ref|XP_003038909.1| hypothetical protein SCHCODRAFT_73694 [Schizophyllum commune H4-8] gi|300112606|gb|EFJ04007.1| hypothetical protein SCHCODRAFT_73694 [Schizophyllum commune H4-8] Length = 482 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 120/366 (32%), Gaps = 74/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM 71 + N + F + R L P DPS LG + P+ +S G ++ Sbjct: 139 AEDEVSYYSNAQAFTRFFFHARVLRP---VSHCDPSTTILGHPSALPIFVSG--AGLARL 193 Query: 72 IERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + N+ + V S S + AP L L + Sbjct: 194 GHPLGEANITRGCAAGGIIQMV-SSSPSLSYAEIMD-----AAAPGQTLFFQL--YKNKD 245 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN------------------------PLQEIIQPNGNT 166 D ++ + V LG +FL ++ P++ + +P T Sbjct: 246 DAIAEQRVREVERLGYKAIFLTVDAVVPSKRERDIGSAWDLEEEERGGPIEYVEEPQDGT 305 Query: 167 NFAD---------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I L S +P+++K + C D L +++G+ Sbjct: 306 AHGWGAGGALVLNDDKDMTWEKTIPWLRSVTRLPVVVKGIQC---VEDALLAVEAGVDGI 362 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG ++ + + ++ + GG+R G Sbjct: 363 LLSNHGGRQLDYALPPLEVLYRLRTRHPE--------------VFSKVEVYLDGGVRRGT 408 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D++K++ LG + GL PFL + + V I L E + +M L+G ++ L + Sbjct: 409 DVIKAVCLGTTAVGLGRPFLYAQSAYGAAGVKRIIHILESEIVTAMRLMGVSSLKGL--S 466 Query: 331 TALIRH 336 A++ Sbjct: 467 PAMVER 472 >gi|42516883|emb|CAD92064.1| isopentenyl diphosphate isomerase type 2 [Natronobacterium sp. SSL6] Length = 107 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 5/108 (4%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I SMTGG+ +INR LA AA+KT VAM VGSQR D I+S+ + R AP Sbjct: 1 IDSMTGGHPNTT-KINRALAEAAQKTNVAMGVGSQRAGLELDDEELIESYAVVRDVAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 L N+GA QL ++ V +AV ++ AD + +HLN LQE IQP G+ Sbjct: 60 FLYGNVGAAQL-LEYDVADVEEAVEMIEADAIAVHLNFLQEAIQPEGD 106 >gi|261213019|ref|ZP_05927303.1| L-lactate dehydrogenase [Vibrio sp. RC341] gi|260838084|gb|EEX64761.1| L-lactate dehydrogenase [Vibrio sp. RC341] Length = 378 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVL--NDMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ +I P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMIHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRTGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|258622450|ref|ZP_05717472.1| L-lactate dehydrogenase [Vibrio mimicus VM573] gi|258625177|ref|ZP_05720093.1| L-lactate dehydrogenase [Vibrio mimicus VM603] gi|262173313|ref|ZP_06040990.1| L-lactate dehydrogenase [Vibrio mimicus MB-451] gi|262403059|ref|ZP_06079619.1| L-lactate dehydrogenase [Vibrio sp. RC586] gi|258582552|gb|EEW07385.1| L-lactate dehydrogenase [Vibrio mimicus VM603] gi|258585150|gb|EEW09877.1| L-lactate dehydrogenase [Vibrio mimicus VM573] gi|261890671|gb|EEY36658.1| L-lactate dehydrogenase [Vibrio mimicus MB-451] gi|262350558|gb|EEY99691.1| L-lactate dehydrogenase [Vibrio sp. RC586] Length = 378 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMTHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRTGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|92112537|ref|YP_572465.1| L-lactate dehydrogenase [Chromohalobacter salexigens DSM 3043] gi|122420794|sp|Q1R0J2|LLDD_CHRSD RecName: Full=L-lactate dehydrogenase [cytochrome] gi|91795627|gb|ABE57766.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Chromohalobacter salexigens DSM 3043] Length = 392 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 116/372 (31%), Gaps = 75/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + E G+ L+ P+ ++ + G Sbjct: 29 AYAEHTLRRNVEDLAGIALRQRVLK--DMSHLSLETELFGEPLAMPVALAPV-GLAGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQ--YAPHTVLISN 122 R A AA + + + V + + LR + H + + Sbjct: 86 RRGEVQAARAAASKGIPFTLSTVSVCPIAEVASAIERPLWFQLYVLRDRGFMKHVLERAK 145 Query: 123 ---LGAVQLNYDFGVQKAHQ-------------AVHVLGADG-------LFLHLNP---- 155 + + D V A +L A + LH P Sbjct: 146 AAGVKTLVFTVDMPVPGARYRDAHSGMSGKHGGLRRMLQAVTHPSWAWDVGLHGRPHDLG 205 Query: 156 -LQEII-QPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + QP ++ + + D P+++K + L D Sbjct: 206 NVSDYRGQPTELEDYIAWLGNNFDPSISWKDLEWIREFWDGPMIIKGI---LDPEDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + T +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGVP------------------STARALPAIADAVKGDLAIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+D+++ I +GA L ++ A V +E KE V+M L G Sbjct: 305 ADSGVRNGLDVVRMIAMGADTILLGRAYIYALATAGEAGVAHLLELFEKEMRVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 + + EL ++ + Sbjct: 365 RSIAELGSDSLV 376 >gi|229514392|ref|ZP_04403853.1| L-lactate dehydrogenase [Vibrio cholerae TMA 21] gi|262191958|ref|ZP_06050125.1| L-lactate dehydrogenase [Vibrio cholerae CT 5369-93] gi|229348372|gb|EEO13330.1| L-lactate dehydrogenase [Vibrio cholerae TMA 21] gi|262032192|gb|EEY50763.1| L-lactate dehydrogenase [Vibrio cholerae CT 5369-93] gi|327485954|gb|AEA80360.1| L-lactate dehydrogenase [Vibrio cholerae LMA3894-4] Length = 378 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMTHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|312214401|emb|CBX94393.1| hypothetical protein [Leptosphaeria maculans] Length = 388 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 104/329 (31%), Gaps = 45/329 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F + L R + +I + LG K S P I+ G Sbjct: 72 AAGEWSYRNNLEVFPRFRLRPRVMRDIVNIQDSLPTTLLGHKFSAPFFIAPCARG---AY 128 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTVLISNLGAVQL 128 + L + A + ++S+ + R VL Q+ Sbjct: 129 ANPDGELGLVRGAAAGDILYMP----ALYSNTPMADIYAARSTTNNSEQVLFQ-----QV 179 Query: 129 NYDFGVQKAHQA---VHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIA 176 D G+ + V GA + L ++ + I+ Sbjct: 180 YLDGGLNETQALFKQVEAAGAKAIILTVDSPGDGIRHRAARYSVGSANTQFTRLTWDLYR 239 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 S+ +P++ K + + D + G + ++ GG S ++ +I Sbjct: 240 QFSAMTSLPIIPKGIQ---TVEDAREAITQGAKAIYLSNHGGRQLDTSPSALEIALEIFN 296 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 E + A GG+R G D+LK + LG GL PF+ + Sbjct: 297 --------------EDPAVFKEVEVYADGGVRYGTDVLKLLALGVRAVGLGRPFMFANVY 342 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 ++ V A++ L+ E LG ++ Sbjct: 343 GAEGVKKAVDVLKYEIANDAANLGVGDLK 371 >gi|90419859|ref|ZP_01227768.1| putative L-lactate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90335900|gb|EAS49648.1| putative L-lactate dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 414 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 112/362 (30%), Gaps = 76/362 (20%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N+ F+D L+ R L ++ D S GK P IS M G + + Sbjct: 64 AFRANRSDFEDIRLVPRILAGLAVR--DQSRTLFGKTWKHPFGISPM-GLSALTAYDGDI 120 Query: 78 NLAIAAEKTKVAMAVGSQRVM---------------------------FSDHNAIKSFEL 110 L +A + + + + ++ D +++ Sbjct: 121 VLTRSAHECGIPAVLSATSLISLERVAKEGHARWFQAYLPGDDARVTGMVDRLTAANYDT 180 Query: 111 RQYAPHTVLISN--------LGAV-QLNYDFGVQKAHQAVHVLG--ADGLFLHLNPLQE- 158 + N GA + + D +Q + V+G A L H P E Sbjct: 181 LVITADVPVAGNREDSKRDRFGAPMKPSLDLALQGVVRPGWVMGTMARTLMNHGMPHFEN 240 Query: 159 --------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 II N +F A+ L++K V LS D + Sbjct: 241 ADVERGPAIISKNVVRSFGGRGTFSWRHAAIARERWKGRLVIKGV---LSPQDARRAREL 297 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG + +L + + + GG Sbjct: 298 GADGIIVSNHGGRQLDYA------------------VSAIAALPAVKAEAGDMAVMLDGG 339 Query: 267 LRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK+I LGA + PFL A+ D V A+ L E M ++G + Sbjct: 340 VRRGSDVLKAIALGAEFVFVGRPFLFAAAVAGDDGVKHAVSLLAAEIDRDMAMIGAPSLD 399 Query: 326 EL 327 + Sbjct: 400 AI 401 >gi|167035728|ref|YP_001670959.1| L-lactate dehydrogenase [Pseudomonas putida GB-1] gi|259494489|sp|B0KIT4|LLDD_PSEPG RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166862216|gb|ABZ00624.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas putida GB-1] Length = 381 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 64/377 (16%), Positives = 119/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + E+ S + LS P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVSDLASIALRQRVL--NNMSELSLSTRLFDETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVA--MAVGSQRVMFSDHNAIK---SFELRQYAPHTVLISNLGA 125 E A AA + M+ S + AI F+L + A Sbjct: 87 RGEV---QAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-----PLQEIIQPN---------- 163 ++ GV+ V + A N LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGR 200 Query: 164 ---------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + D P+++K + L + Sbjct: 201 PHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREYWDGPMIIKGI---LDAD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D +K G ++ GG + + + +L +A Sbjct: 258 DARDAVKFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M Sbjct: 300 DLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + E+ ++ + Sbjct: 360 VLTGAKSISEITRDSLV 376 >gi|116492687|ref|YP_804422.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Pediococcus pentosaceus ATCC 25745] gi|116102837|gb|ABJ67980.1| L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase [Pediococcus pentosaceus ATCC 25745] Length = 369 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 114/353 (32%), Gaps = 67/353 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N+ F + +AL I ++ + + E G L+ P++++ + Sbjct: 46 DEWTLRQNRTAFQHRQIAPKALSGI--EKPELNTEIFGIPLNTPVMMAP------AAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 + + +A G + +S + + + AP + N Sbjct: 98 LAHSQGEKDTARGLAAVGGLMAQSTYSSVSIADTAAAGEGAPQFFQLYMSKDWNFNESL- 156 Query: 134 VQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNFADLS-------------------- 172 + +A +A + L ++ + + + FA Sbjct: 157 LDEAKKA----HVKAIILTVDATVDGYREADIKNKFAFPLPMANLTKFSEGDGQGKGIEE 212 Query: 173 -----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + ++ +P+++K + + D + +G ++ GG Sbjct: 213 IYASAAQNIRPEDVRRIADYTQLPVIVKGIQ---TPEDAIRAIDAGAAGIYVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + D+ DI + I G+R G D+ K++ GA Sbjct: 270 NGGPGSFDVLEDIAT-----------------SVNKQVPIIFDSGVRRGSDVFKALASGA 312 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + L P + A+ + V + E + E + M L GTK + ++ N L Sbjct: 313 DIVALGRPVIYGLALGGAKGVQSVFEHIDHELEIVMQLAGTKTIDDIKNNPLL 365 >gi|146417137|ref|XP_001484538.1| hypothetical protein PGUG_03919 [Meyerozyma guilliermondii ATCC 6260] Length = 273 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 18/168 (10%) Query: 163 NGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 NG T++ I + + ++P+ LK + G D+ L + GI ++ GG Sbjct: 79 NGKTDYPSNLSWKHIERIRACTNIPIALKGIQRG---EDVVLAAEKGISGVVLSNHGGRQ 135 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++ S+ + ++ G+ N+ + GG+R G DI+K++ LG Sbjct: 136 LDFSRPPLEVLSEAKQMLKERGLD------------NKIEIYIDGGIRRGSDIVKALCLG 183 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ GL PFL A + V+ + L E +M LLG +++L Sbjct: 184 ATGVGLGRPFLYAMAGYGEEGVLKLVLLLEGEVKNNMKLLGVDNIKDL 231 >gi|296113042|ref|YP_003626980.1| L-lactate dehydrogenase [Moraxella catarrhalis RH4] gi|295920736|gb|ADG61087.1| L-lactate dehydrogenase [Moraxella catarrhalis RH4] gi|326560420|gb|EGE10802.1| L-lactate dehydrogenase [Moraxella catarrhalis 7169] gi|326561623|gb|EGE11960.1| L-lactate dehydrogenase [Moraxella catarrhalis 103P14B1] gi|326565845|gb|EGE16007.1| L-lactate dehydrogenase [Moraxella catarrhalis BC1] gi|326570500|gb|EGE20540.1| L-lactate dehydrogenase [Moraxella catarrhalis BC8] gi|326573475|gb|EGE23443.1| L-lactate dehydrogenase [Moraxella catarrhalis 101P30B1] gi|326575628|gb|EGE25551.1| L-lactate dehydrogenase [Moraxella catarrhalis CO72] Length = 402 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 128/371 (34%), Gaps = 71/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ +S P+ I+ TG M Sbjct: 36 QTTYRNNETDFDRIKLRQRVL--VDMDNRSLATQMIGQDVSMPVAIAP-TGFTGMMWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS---N 122 + A AAEK + ++ + + + A + F+L +++ + + + N Sbjct: 93 EIHAARAAEKFGIPFSLSTMSICSIEDVAENTTKPFWFQLYVMRDKEFMENLIKRAKAAN 152 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------FADL- 171 A+ L D V Q+ + L A N L + +P N F ++ Sbjct: 153 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLKNILNLMTKPEWCYNMLGTKRHTFRNIA 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + PL+LK + + D + + Sbjct: 213 GHAKNVSDLSSLSAWTAEQFDPGLSWDDVARIKDMWGGPLILKGI---MEPEDAIMAARF 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G I+ GG S +D ++ ++ + + G Sbjct: 270 GADAMVISNHGGRQLDGAPSSIASLTD--------------CVQASQAENSNCEVWLDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+I LGA + FL D V A+E + KE V+M G + Sbjct: 316 IRSGQDVLKAIALGAKGTMIGRSFLYGLGAYGEDGVRRALEIIYKECDVTMAFCGHTNIS 375 Query: 326 ELYLNTALIRH 336 + + L++ Sbjct: 376 TV-NSDILVKG 385 >gi|325276133|ref|ZP_08141942.1| L-lactate dehydrogenase [Pseudomonas sp. TJI-51] gi|324098732|gb|EGB96769.1| L-lactate dehydrogenase [Pseudomonas sp. TJI-51] Length = 381 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 65/377 (17%), Positives = 120/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + E+ G+ LS P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVADLASIALRQRVLK--NMSELSLQTTLFGETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVA--MAVGSQRVMFSDHNAIK---SFELRQYAPHTVLISNLGA 125 E A AA + M+ S + AI F+L + A Sbjct: 87 RGEV---QAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV--LGADGLFLHL----------NPLQEIIQPN---------- 163 ++ GV+ V + GA H LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKHGPLRRVLQAMTHPEWAWDVGVMGR 200 Query: 164 ---------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + D P+++K + L + Sbjct: 201 PHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGI---LDAD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D +K G ++ GG + + + +L +A Sbjct: 258 DARDAVKFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M Sbjct: 300 DLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + E+ ++ + Sbjct: 360 VLTGAKTISEITRDSLV 376 >gi|284166168|ref|YP_003404447.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haloterrigena turkmenica DSM 5511] gi|284015823|gb|ADB61774.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haloterrigena turkmenica DSM 5511] Length = 431 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 121/362 (33%), Gaps = 64/362 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + F+ W ++ R L + D SV+ G + P+L++ + G + Sbjct: 87 AGSESTVRANDRAFETWQIVPRML--RDVSDRDLSVDLFGTEYPAPVLLAPI-GVQEILH 143 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM--------------------FSDHNAIKSFELRQ 112 E +A AA + + M + S +D + SF R Sbjct: 144 EEAELAVARAAREFGIPMVLSSVSSYTFEDVADELGDSPGWFQLYWSADRDVAASFLERA 203 Query: 113 YAP---------HTVLIS------NLGAVQLNYDFGVQK-----AHQAVHVLGADGLFLH 152 T + LG + G+Q A +A + Sbjct: 204 EDAGYEAVVVTLDTPKMGWRERDIELGYLPFLETQGLQNYFADPAFRARLEADPED---- 259 Query: 153 LNPLQEI-IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 +P+ I + + + L D+P++LK V L D + G+ Sbjct: 260 -DPVSAIRSWKECFGDASLTWEDLDWLDEQTDLPIVLKGV---LHPDDAREAVDRGVDGL 315 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG D D+ +++ E + G+R G Sbjct: 316 IVSNHGGRQVDGAIPALDALPDV-----------VDAVDDTTAADEEFPVLFDSGIRRGS 364 Query: 272 DILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+ +++ LGA L P+ L + D V A +E+L + +++ L G + ++ + Sbjct: 365 DVFRAVALGADAVLLGRPYALGLGIGGEDGVRAVLENLLADVDLTVGLSGCASIDDVDRS 424 Query: 331 TA 332 Sbjct: 425 NL 426 >gi|15601737|ref|NP_233368.1| L-lactate dehydrogenase [Vibrio cholerae O1 biovar eltor str. N16961] gi|121587022|ref|ZP_01676800.1| L-lactate dehydrogenase (cytochrome) [Vibrio cholerae 2740-80] gi|121726357|ref|ZP_01679631.1| L-lactate dehydrogenase [Vibrio cholerae V52] gi|153818194|ref|ZP_01970861.1| L-lactate dehydrogenase [Vibrio cholerae NCTC 8457] gi|153821022|ref|ZP_01973689.1| L-lactate dehydrogenase [Vibrio cholerae B33] gi|227812549|ref|YP_002812559.1| L-lactate dehydrogenase [Vibrio cholerae M66-2] gi|229505881|ref|ZP_04395390.1| L-lactate dehydrogenase [Vibrio cholerae BX 330286] gi|229510265|ref|ZP_04399745.1| L-lactate dehydrogenase [Vibrio cholerae B33] gi|229517604|ref|ZP_04407049.1| L-lactate dehydrogenase [Vibrio cholerae RC9] gi|229522505|ref|ZP_04411921.1| L-lactate dehydrogenase [Vibrio cholerae TM 11079-80] gi|229605414|ref|YP_002876118.1| L-lactate dehydrogenase [Vibrio cholerae MJ-1236] gi|254850147|ref|ZP_05239497.1| L-lactate dehydrogenase [Vibrio cholerae MO10] gi|255746280|ref|ZP_05420227.1| L-lactate dehydrogenase [Vibrio cholera CIRS 101] gi|262158162|ref|ZP_06029280.1| L-lactate dehydrogenase [Vibrio cholerae INDRE 91/1] gi|298499755|ref|ZP_07009561.1| L-lactate dehydrogenase [Vibrio cholerae MAK 757] gi|81857978|sp|Q9KKW6|LLDD_VIBCH RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491777|sp|C3LWP7|LLDD_VIBCM RecName: Full=L-lactate dehydrogenase [cytochrome] gi|9658425|gb|AAF96880.1| L-lactate dehydrogenase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548757|gb|EAX58804.1| L-lactate dehydrogenase (cytochrome) [Vibrio cholerae 2740-80] gi|121631105|gb|EAX63480.1| L-lactate dehydrogenase [Vibrio cholerae V52] gi|126511300|gb|EAZ73894.1| L-lactate dehydrogenase [Vibrio cholerae NCTC 8457] gi|126521396|gb|EAZ78619.1| L-lactate dehydrogenase [Vibrio cholerae B33] gi|227011691|gb|ACP07902.1| L-lactate dehydrogenase [Vibrio cholerae M66-2] gi|229340490|gb|EEO05496.1| L-lactate dehydrogenase [Vibrio cholerae TM 11079-80] gi|229345640|gb|EEO10613.1| L-lactate dehydrogenase [Vibrio cholerae RC9] gi|229352710|gb|EEO17650.1| L-lactate dehydrogenase [Vibrio cholerae B33] gi|229356232|gb|EEO21150.1| L-lactate dehydrogenase [Vibrio cholerae BX 330286] gi|229371900|gb|ACQ62322.1| L-lactate dehydrogenase [Vibrio cholerae MJ-1236] gi|254845852|gb|EET24266.1| L-lactate dehydrogenase [Vibrio cholerae MO10] gi|255736034|gb|EET91432.1| L-lactate dehydrogenase [Vibrio cholera CIRS 101] gi|262030040|gb|EEY48686.1| L-lactate dehydrogenase [Vibrio cholerae INDRE 91/1] gi|297541736|gb|EFH77787.1| L-lactate dehydrogenase [Vibrio cholerae MAK 757] Length = 378 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMAHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|239788888|dbj|BAH71101.1| ACYPI009208 [Acyrthosiphon pisum] Length = 365 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 115/348 (33%), Gaps = 56/348 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 C + + N K F+ ++ R L D S+ G K++ P+ IS +M + Sbjct: 31 ACDEYTLSINNKAFNKLRIVPRML--RDVRNRDLSITIQGDKVNVPIGISPCAM---HKM 85 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFELRQYAPHTVLISNL- 123 E A AA K + + + N +K F+L Y + S + Sbjct: 86 AHEDGECASARAAGKHGAIFILSTLSTCSLEEVATAAPNTVKWFQLYIYKDRVLTTSLIR 145 Query: 124 -------GAVQLNYDFGVQKAH-QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---- 171 A+ L D V + + + L L E + TN + L Sbjct: 146 RAEKSGYKALVLTVDAPVFGIRYKDIKNNFSLPSRLRLGNFSEELSVMNQTNGSGLTKYV 205 Query: 172 ---------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 I L S D+P+++K + LS+ D ++ G ++ GG Sbjct: 206 MSLFDDRLVWDDIKWLKSITDLPIIVKGI---LSAADAKIAADLGCDGVFVSNPGGRQLD 262 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + ++ I AR + G+R+G D+ K++ GA Sbjct: 263 TAPATIEVLPSI-----------------AREVGHRVDIYFDCGIRHGTDVFKALAFGAK 305 Query: 283 LGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + LA P L D + EF M L G + ++ Sbjct: 306 MVFLAQPILWGLTYDGQKGAEDVFGIVVNEFDNPMALAGCASLDQIKK 353 >gi|87119289|ref|ZP_01075187.1| L-lactate dehydrogenase [Marinomonas sp. MED121] gi|86165680|gb|EAQ66947.1| L-lactate dehydrogenase [Marinomonas sp. MED121] Length = 395 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 124/373 (33%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + +N + + L R L ++D S E G+KLS P+ ++ + TG + E Sbjct: 48 EHTLRKNTQDLAEIALRQRVL--NDMSQMDLSTELFGEKLSLPISLAPVGLTGMYARRGE 105 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AA+K + + + + + L R + + + + Sbjct: 106 V---QAAKAADKKGIPFTMSTVSVCPIEEVAPSIERPMWFQLYVLKDRGFMKNALERAKA 162 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQPN-------------- 163 V D V A + G + + LQ + P Sbjct: 163 AGVTTLVFTVDMPVPGARYRDMHSGMSGENAPIRRV--LQAMCHPQWALDVGLLGKPHDL 220 Query: 164 -----------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ + + D P+++K + L + D + Sbjct: 221 GNISTYRGEATKLADYIGWLGDNFDPSISWKDLEWIRDYWDGPMVIKGI---LDADDAKD 277 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 +K G ++ GG + + + +L +A E + Sbjct: 278 AVKFGADGIIVSNHGGRQLDGV------------------LSSAKALPYIADAVKGEVKI 319 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+RNG+D+++ + LGA L F+ A V + ++ KE V+M L G Sbjct: 320 LVDSGIRNGLDVVRMLALGADSTLLGRSFIYALAAKGQAGVESLLDLYEKEMRVAMTLCG 379 Query: 321 TKRVQELYLNTAL 333 ++ +L ++ + Sbjct: 380 ANKLSDLTRDSLV 392 >gi|315500351|ref|YP_004089154.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] gi|315418363|gb|ADU15003.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] Length = 396 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 118/368 (32%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + E LG+KLS P+ ++ + TG + Sbjct: 46 AYAERTLARNMSDLGDVALRQRVLK--DVSSLSLETELLGEKLSMPIALAPVGLTGMYAR 103 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A AA+K + + + + V + K F+L R + + + Sbjct: 104 RGEV---QAARAAQKAGINLTLSTVSVCPIEEVQGKCDKPIWFQLYVLKDRGFMKNALER 160 Query: 121 S---NLGAVQLNYDFGVQKAHQA----------VHVLGADGLFLH--------------- 152 + + + D V A + H Sbjct: 161 AWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAEMRRLWQAVTHPHWAFDVGLMGTPHD 220 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + + G ++ + + P+++K + L D + Sbjct: 221 LGNVSKYLGKATGLADYIGWLGANFDPSISWKDLEWIRDFWKGPMVIKGI---LDPEDAK 277 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + G ++ GG + + + +L +A + Sbjct: 278 DAVSFGADGIVVSNHGGRQLDGV------------------LSSARALPAIAEAVKGDLT 319 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R G+D+++ I LGA L F+ +A V + KE V+M L Sbjct: 320 ILADSGIRTGLDVVRMIALGADGVLLGRAFIYALAAGGEAGVSNLLTLFEKEMRVAMALT 379 Query: 320 GTKRVQEL 327 G K ++E+ Sbjct: 380 GVKSIREI 387 >gi|262193414|ref|YP_003264623.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haliangium ochraceum DSM 14365] gi|262076761|gb|ACY12730.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haliangium ochraceum DSM 14365] Length = 391 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 117/347 (33%), Gaps = 52/347 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F L +R L + E + G LS P++++ +++ Sbjct: 38 ANDELTLRENQAAFARLALHYRVL--VDVSERSTRTQLQGHPLSMPVILAPSA--FHRLA 93 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISN 122 R + LA AA + M + + + + + R A LI Sbjct: 94 HR-DGELATARAAGEAGTVMVLSTLSTTRVEEVTAAATGPVWFQLYVYRDRAVTRALIER 152 Query: 123 LGAVQ-----LNYDFGV-QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL----- 171 + A L D + + + V LHL LQ + + D Sbjct: 153 VEAAGCEALVLTVDAPLLGRRDRDVRNRFQLPADLHLENLQPAGLEDLPRDVHDSGLAAY 212 Query: 172 ----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 I L S +PL +K + + + D + +G+ ++ GG Sbjct: 213 FATLLDPALSWDDIEWLRSITRLPLYVKGI---VRADDAARAMAAGVDGIWVSNHGGRQL 269 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + D+ DI R + I GG+R G D++K++ LGA Sbjct: 270 DTSPATIDVLPDIAEAVA------------VRGGSRQVAIILDGGVRRGTDVIKAVALGA 317 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S L P L A D + + LR E ++M L G V +L Sbjct: 318 SAVALGRPVLWGLAYDGQAGLSKLLGLLRDEIDLAMALCGCPSVGDL 364 >gi|121605455|ref|YP_982784.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] gi|120594424|gb|ABM37863.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 396 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 66/320 (20%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNA 104 +E LG+ L+ P+ ++ + +M A AA M + +Q M + A Sbjct: 94 TRIELLGRTLAHPVFLAPVA--YQRMAHAGGEVASAYAASALGAGMVLSTQASMPLETVA 151 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN---------- 154 + L L +Q + F + +A G + L L ++ Sbjct: 152 Q---AIAGDPQRGPLWFQL-YIQPDRGFTRELVQRA-EQAGYEALVLTVDAPASGARDRE 206 Query: 155 ---------------------PLQEIIQPNGNTNFADLS------SKIALLSSAMDVPLL 187 P Q +QP + F L +A L S +P+L Sbjct: 207 RRANFHLPAHVSAVNLAGLAPPPQVALQPGQSALFDGLLVNTPTWDDVAWLQSITRLPVL 266 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + L D + + GG + + + I Sbjct: 267 LKGI---LHPGDARQAAVLQVAGIIASNHGGRTLDTAPATASVLPRI------------- 310 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIE 306 + E + GG+R G DILK++ LGAS + P++ A + V + Sbjct: 311 ----VQAVAGELPVLVDGGIRRGTDILKAMALGASAVLVGRPYIHGLANAGALGVAHVLR 366 Query: 307 SLRKEFIVSMFLLGTKRVQE 326 LR E ++M L G + + + Sbjct: 367 LLRDELEIAMALCGCRTLAQ 386 >gi|326577092|gb|EGE26986.1| L-lactate dehydrogenase [Moraxella catarrhalis O35E] Length = 402 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 128/371 (34%), Gaps = 71/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ +S P+ I+ TG M Sbjct: 36 QTTYRNNETDFDRIKLRQRIL--VDMDNRSLATQMIGQDVSMPVAIAP-TGFTGMMWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS---N 122 + A AAEK + ++ + + + A + F+L +++ + + + N Sbjct: 93 EIHAARAAEKFGIPFSLSTMSICSIEDVAENTTKPFWFQLYVMRDKEFMENLIKRAKAAN 152 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------FADL- 171 A+ L D V Q+ + L A N L + +P N F ++ Sbjct: 153 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLKNILNLMTKPEWCYNMLGTKRHTFRNIA 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + PL+LK + + D + + Sbjct: 213 GHAKNVSDLSSLSAWTAEQFDPGLSWDDVARIKDMWGGPLILKGI---MEPEDAIMAARF 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G I+ GG S +D ++ ++ + + G Sbjct: 270 GADAMVISNHGGRQLDGAPSSIASLTD--------------CVQASQAENSNCEVWLDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+I LGA + FL D V A+E + KE V+M G + Sbjct: 316 IRSGQDVLKAIALGAKGTMIGRSFLYGLGAYGEDGVRRALEIIYKECDVTMAFCGHTNIS 375 Query: 326 ELYLNTALIRH 336 + + L++ Sbjct: 376 TV-NSDILVKG 385 >gi|121586653|ref|ZP_01676437.1| L-lactate dehydrogenase [Vibrio cholerae 2740-80] gi|121549081|gb|EAX59116.1| L-lactate dehydrogenase [Vibrio cholerae 2740-80] Length = 379 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 122/371 (32%), Gaps = 79/371 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMAHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTAL 333 + EL ++ + Sbjct: 366 SIAELSRDSLV 376 >gi|194758048|ref|XP_001961274.1| GF13782 [Drosophila ananassae] gi|190622572|gb|EDV38096.1| GF13782 [Drosophila ananassae] Length = 366 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 120/334 (35%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S E G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISCEIFGERMKWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D IK F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPETIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + G + + + E + + + IA L S + Sbjct: 171 NNFSLPSHLTLANFQGIKATGVASSNMGASGINEYVSSQFDPTISW--KDIAWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + ++ Sbjct: 229 PIVVKGV---LTAEDAVLAREFGCAGIIVSNHGARQIDTVPASIEALPEV---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 R ++ + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------VRAVGDDLVVMLDGGIIQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F ++M L+G++ ++++ +++ H+ Sbjct: 329 MLSVLRKDFEITMALIGSQTLKDIQ--PSMVVHE 360 >gi|1155211|gb|AAA85265.1| unknown [Lactococcus lactis subsp. cremoris MG1363] Length = 139 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + ++ G GGT+++ IE R G D+G T SL A+ N +A+GG+ Sbjct: 2 VSGINVGGAGGTNFAWIERKRSKN---GFDLDDFGFSTLESLLEAKTAENTKSLVATGGI 58 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + DI KS+ILGA L A LK M + V +E +++ L G+K + E Sbjct: 59 SSAQDIFKSLILGADLASSAGFILKNLMQTGPEKVEEILEQWKQDLNKLFVLTGSKNIAE 118 Query: 327 LYLNTAL 333 + L Sbjct: 119 SHNVDLL 125 >gi|189205965|ref|XP_001939317.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975410|gb|EDU42036.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 500 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 107/362 (29%), Gaps = 74/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKM 71 I N + + R + EVD E G +P I M T G Sbjct: 138 ANTGASIKGNIDDWGRINFRPRVM--RDVGEVDTRREIFGHGSPYPFYICPMGTMGAIHP 195 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ---------------YAP- 115 + A + V V + S ++S++ Q Y P Sbjct: 196 GAEP--EMIRGAVRKGVHTVVSTASSK-SSEQIMQSYKDEQERLGHGSPTQLFYQYYMPV 252 Query: 116 ---------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN 165 H V + + D + A L A+ + L G Sbjct: 253 DRKKAIELLHIVKRCGYKGLWITVDAPILGKRTADRYLQAEEAFAVGLAEESTADWEAGG 312 Query: 166 TNF----------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 N + + + D ++LK + C D +L + G Sbjct: 313 DNAFAPAMGGRPVQGQLSPHLSWADLEWIRKEWDGHIVLKGLQCA---EDAKLAMDYGCD 369 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASG 265 ++ GG ++L R YC E + G Sbjct: 370 GILLSNHGGRQLHTAP------------------SALMTLLEIRTYCPEVLGKLEVFLDG 411 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GLR+G D+LK++ LGA+ G+ PFL S V ++ L +E M LLG + Sbjct: 412 GLRDGNDVLKALCLGATAVGVGRPFLYALGAYGSKGVERCVDILAEEVQTGMRLLGITSL 471 Query: 325 QE 326 + Sbjct: 472 DQ 473 >gi|254473122|ref|ZP_05086520.1| L-lactate dehydrogenase (cytochrome) protein [Pseudovibrio sp. JE062] gi|211957843|gb|EEA93045.1| L-lactate dehydrogenase (cytochrome) protein [Pseudovibrio sp. JE062] Length = 384 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 121/369 (32%), Gaps = 77/369 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + + +G+ +S P+ ++ TG G Sbjct: 33 ESTYQANESDFAKIKLRQRI--AVDMTNRTLATKMIGQDVSMPVALAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS-N 122 I A AAE+ V + + + + A K+ F+L R + + + N Sbjct: 90 EILA--AQAAEEFGVPFTLSTMSICSIEAVAAKTTKPFWFQLYVMKDRDFINSLIDRAKN 147 Query: 123 LGAVQLNYDFGVQ----KAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFAD 170 G L F +Q + + L A F + Q +P N F + Sbjct: 148 AGCSALVLTFDLQILGQRHKDLRNGLSAPPKFTPKHVWQMATRPMWCMKMLTTQNRTFGN 207 Query: 171 L--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + I + PL+LK + L D + Sbjct: 208 IVGHAKGVGDLSSLSSWTAEQFDPRLSWDDIEWIKKQWGGPLILKGI---LDKEDARHAV 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 SG ++ GG S ++ +I ++ + Sbjct: 265 DSGCDAIIVSNHGGRQLDGAPSSIEILPEI-----------------VDEVGDKVEIHID 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+I LGA + PFL V ++E L+KE +M L G + Sbjct: 308 GGIRSGQDVLKAICLGAKGTYIGRPFLYGLGAGGKQGVTQSLEILQKELDTTMALCGRRD 367 Query: 324 VQELYLNTA 332 + L + Sbjct: 368 LNTLNRDNL 376 >gi|332296450|ref|YP_004438373.1| (S)-2-hydroxy-acid oxidase [Thermodesulfobium narugense DSM 14796] gi|332179553|gb|AEE15242.1| (S)-2-hydroxy-acid oxidase [Thermodesulfobium narugense DSM 14796] Length = 339 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 105/322 (32%), Gaps = 44/322 (13%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 +N + D L R + E D S+ G L P++ + +T + + Sbjct: 43 ESFKQNVRALSDIRLNLRVVH--DVLEPDTSINLFGINLLTPIMGAPITNASLNCGGGLT 100 Query: 77 R-----NLAIAAEKTK-VAM----AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 +L + A+ S + + + + P + Sbjct: 101 EFELVSSLVKGCHDAGSLGWIGDPAIPSMFTDGLEAIKLATRGVAIIKPRVDQGEIIRRF 160 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 + G + G + L G SKI L +++ VP Sbjct: 161 EDAIQAGAIAVGIDIDGAGLVTMKL-----------KGQAVGPKNISKIRELVNSVSVPF 209 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 ++K + ++ + +G ++ GG ++ I Sbjct: 210 VVKGI---MTPDEAVACFDAGANAIVVSNHGGRVLDFTPGVAEVLPKI------------ 254 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAI 305 + +A +A GG+R+GVD LK I LGA + P + A + S+ V I Sbjct: 255 -----IKAVGKDAIVLADGGVRSGVDALKLIALGAKGVLVGRPLITGAFGAMSEGVKFII 309 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 E +E +M L G K ++++ Sbjct: 310 EKYTQELYAAMILTGCKSIKDI 331 >gi|320592437|gb|EFX04867.1| cytochrome mitochondrial precursor [Grosmannia clavigera kw1407] Length = 384 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 110/322 (34%), Gaps = 37/322 (11%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIER 74 + N + ++ + + + +I+ + LG +S PL IS G Sbjct: 76 EWSYRNNLEVYNRYRFVPHTVVDITSIANSMNTTILGHNISSPLFISPCARAGYGHPDAE 135 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 +N L AA +A + S + +L S + N + Sbjct: 136 LN--LVRAAAANDIAYII-SGYATLPLPQIAAAAT-----KDQLLFSQI-YFNNNDTYNT 186 Query: 135 QKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTN--------FADLSSKIALLSSAMDVP 185 + H A GA + ++ P Q + F + + L + +P Sbjct: 187 EHIHLA-EAAGAKAIVWSVDSPGSPSRQRAARYDVGSANTVFFKNTWERYTQLQAQTSLP 245 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++LK + +S+ D + G++ ++ GG + S ++ +I Sbjct: 246 IVLKGI---MSAADARSAINHGVKAIILSNHGGRNLDGSPSSLEVALEIHN--------- 293 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 + + +A GG+R G D L+ + LG G+ P + + V A+ Sbjct: 294 -----NDPSVFQDVEVLADGGIRYGTDALRLLSLGVKAVGIGRPIMFSNVFGEQGVTKAV 348 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 L+ E + LG ++ + Sbjct: 349 GLLKNELLNDAANLGVADIKAI 370 >gi|42516875|emb|CAD92060.1| isopentenyl diphosphate isomerase type 2 [Haloterrigena turkmenica] Length = 108 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 5/110 (4%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHT 117 I SMTGG+ E INR LA AA +T +AM +GSQR D+ ++S+ + R AP Sbjct: 1 IDSMTGGHQNTTE-INRALARAAGETGIAMGLGSQRAGLELDDNGVLESYTVVRDAAPDA 59 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 + NLGA QL ++ ++ +AV ++ AD L +HLN LQE +QP G+ + Sbjct: 60 FIYGNLGAAQLR-EYDLETVERAVEMIEADALAVHLNFLQEAVQPEGDVD 108 >gi|154298987|ref|XP_001549914.1| L-lactate ferricytochrome c oxidoreductase [Botryotinia fuckeliana B05.10] gi|150857509|gb|EDN32701.1| L-lactate ferricytochrome c oxidoreductase [Botryotinia fuckeliana B05.10] Length = 509 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 114/348 (32%), Gaps = 66/348 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-----GGNNKMIER 74 N + L R + + D S L +K+ P+ +S +M G + + Sbjct: 154 NNAVYRQILLRPRVF--VDCTKCDSSTTILRQKVGLPIFVSPAAMARLAHPAGEQGIAKG 211 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA---PHTVLISNLGAVQ---- 127 I+ N + A Q V S + I ++L ++ + A+ Sbjct: 212 IS-NFGAVQIVSNNASMTPEQIVEGSLPDQIFGWQLYVQNDRKKSEAMLQRINAMSDKYK 270 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQPNGNTNFAD----------- 170 L D V + G L ++ +E ++ N Sbjct: 271 FIVLTLDAPVPGKREHDERQKDVGASLPVSSGVKAKEKVEDNSPPAGKGGVGKQLFMGTA 330 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRI 224 S ++ L+ +P++LK + + D L + + ++ GG + Sbjct: 331 ADLTWKSTLSWLAEHTKLPIVLKGIQ---THEDAYLASQYAPQVKGILLSNHGGRALDTA 387 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILG 280 P +L + YC E + GG++ G D++K++ LG Sbjct: 388 P------------------PAIHTLLEIQKYCPEVLSRIEVWVDGGIKRGTDVVKALCLG 429 Query: 281 ASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A G+ L + V E L+ E M LLG +++ EL Sbjct: 430 AKAVGVGRAALFGLGAGGPEGVERTFEILKAEMETCMRLLGVEKISEL 477 >gi|153212205|ref|ZP_01948000.1| L-lactate dehydrogenase [Vibrio cholerae 1587] gi|124116757|gb|EAY35577.1| L-lactate dehydrogenase [Vibrio cholerae 1587] Length = 378 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNTDDLADIALRQRVLS--DMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMAHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDASISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|300918773|ref|ZP_07135344.1| putative L-lactate dehydrogenase [Escherichia coli MS 115-1] gi|300414095|gb|EFJ97405.1| putative L-lactate dehydrogenase [Escherichia coli MS 115-1] Length = 385 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 67/377 (17%), Positives = 125/377 (33%), Gaps = 78/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F W I L + D SV G+KL+ PL I+ TG N + Sbjct: 29 ADDEQTLQDNRRVFGRWRFIPPVL--TDATQRDLSVTLCGQKLAAPLFIAP-TGYNGMLR 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLG 124 + LA AA + + + + A ++ + L+ A T L++ Sbjct: 86 FGADVMLARAAREAGIGYIQSTVSTASIEEIAAENIPRHWFQLYVLKDRAVTTGLLTRAR 145 Query: 125 AV-------------QLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEIIQPNGNTNFA 169 A N + + + + + L +H + I+P G F Sbjct: 146 AAGCTTLVVSVDAVHFGNREKDKRNYRRPMELSLPSMLDIAMHPGWVWRAIRPAGIPGFG 205 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L + + + + PLL+K + L+ D Sbjct: 206 NLKSYVPADKQRGAGGASYFAEQMDTHLDWATLHWIRTQWSGPLLIKGI---LAPEDARR 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQF 261 +G+ ++ GG + L+ R C +A Sbjct: 263 AFAAGVDGIVLSNHGGRQLDGS------------------VSPMEVLQEIRQCCGPDAVI 304 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D++K++ LGA+ + P L A A+ + +E ++ LG Sbjct: 305 LIDSGFRRGTDVVKALALGANGVLIGRPVLYGVAAFGEAGAKQALNIILQEMDRTLAQLG 364 Query: 321 TKRVQELYLNTALIRHQ 337 + +L L+R Q Sbjct: 365 CTSIAQL--GPHLLRFQ 379 >gi|325579252|ref|ZP_08149208.1| L-lactate dehydrogenase [Haemophilus parainfluenzae ATCC 33392] gi|325159487|gb|EGC71621.1| L-lactate dehydrogenase [Haemophilus parainfluenzae ATCC 33392] Length = 389 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 119/373 (31%), Gaps = 81/373 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN + L R L +++ +E G+KLS PL+++ + G R Sbjct: 40 SEHTLTRNVSDLSNIALRQRVL--NDMSQLNTEIELFGEKLSMPLVLAPV-GACGMYASR 96 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ + + + + + A F+L + A++ Sbjct: 97 GEVQAAKAADNKGIPFTLSTVSICPIEEVAPTLKRSMWFQLYVLKDRGFMK---NALERA 153 Query: 130 YDFGVQKAHQAVHVL--GADGLFLH----------------------------------- 152 G + V + GA +H Sbjct: 154 KAAGCKTLVFTVDMPTPGARYRDMHSGMSGEYKWLRRTLQGFTHPLWSYDMLMKGRPFTL 213 Query: 153 LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 N Q + +P G ++ + + D +++K + L + D + Sbjct: 214 GNVSQYMGKPVGLDDYIGWLTDNFDPSISWKDLEWIRDFWDGSMVIKGI---LDAEDAKD 270 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG T +L +A + Sbjct: 271 AVRFGADGIVVSNHGGRQLDGTP------------------STAQALPYVADAVKGNIKI 312 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 +A G+RNG+D+++ I LGA + F+ D V ++ KE V+M L Sbjct: 313 LADSGIRNGLDVVRMIALGADATMIGRSFVYALGADGQRGVENMLDIFHKEMRVAMTLTS 372 Query: 321 TKRVQELYLNTAL 333 K + ++ + + Sbjct: 373 NKNITDITRDALV 385 >gi|238755700|ref|ZP_04617034.1| L-lactate dehydrogenase [cytochrome] [Yersinia ruckeri ATCC 29473] gi|238706067|gb|EEP98450.1| L-lactate dehydrogenase [cytochrome] [Yersinia ruckeri ATCC 29473] Length = 381 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 115/373 (30%), Gaps = 89/373 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L + E+ + + LS P++++ + TG + Sbjct: 29 ANAEHTLRRNTEDLSGIALRQRVLK--NMSELSLETKLFDEILSMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA K + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAKKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHVL--------------GADGLFLHLNPLQEIIQPN-------- 163 ++ GV+ V + G + + LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGSRYRDAHSGMSGPNAAIRRV--LQAMTHPQWAWDVGIC 198 Query: 164 -----------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLS 196 ++ + + P+++K + L Sbjct: 199 GKPHDLGNVSAYRGKPTSLEDYIGWLGNNFDPSISWKDLEWIREFWQGPMIIKGI---LD 255 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPY 255 D + ++ G ++ GG + T +L +A Sbjct: 256 PEDAKDAVRFGADGIVVSNHGGRQLDGVP------------------STAHALPAIADAV 297 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIV 314 + + A G+R+G+D+++ I LGA L F+ A V +E KE V Sbjct: 298 KGDLKIFADSGIRSGLDVVRMIALGADSVLLGRAFIYALATAGEAGVANLLELFDKEMRV 357 Query: 315 SMFLLGTKRVQEL 327 +M L G K + E+ Sbjct: 358 AMTLTGAKSISEI 370 >gi|170057198|ref|XP_001864377.1| hydroxyacid oxidase 1 [Culex quinquefasciatus] gi|167876699|gb|EDS40082.1| hydroxyacid oxidase 1 [Culex quinquefasciatus] Length = 540 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 112/338 (33%), Gaps = 51/338 (15%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N+ F+ + R L + + LG P+ I + G ++ Sbjct: 66 NRSCFERIRIRPRCLARVG--NRSLAATVLGHSYLMPIGIGPI--GLQRLAHSEGERATA 121 Query: 82 AAEKT-KVAMAVGS-QRVMFSD-----HNAIKSFEL-----RQYAPHTVLIS---NLGAV 126 A + V + + V + K F+L R+ + + + A+ Sbjct: 122 RAARAMGVPFVLSALSSVSIEELAEVIPKTPKWFQLYIFKDREMTENLIRRAERARYKAL 181 Query: 127 QLNYDFGVQKAHQAV---------HVLGADGLFLHLNPLQEIIQP--NGNTNFADLSSKI 175 + D V ++ V A+ H N Q+ I + + Sbjct: 182 VVTVDAPVVGLRRSAMKHPTTLPSKVTMANFCPPHNNVCQKNIGAYVRSQLDPTIGWDSL 241 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 L S +P+++K V LS D + G++ ++ GG + ++ ++ Sbjct: 242 RWLLSITSLPVVVKGV---LSREDALMAADLGVQGIIVSNHGGCQLDGAPATIEVLPEV- 297 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PA 294 N + GG+ G D+ K++ LGA + + L A Sbjct: 298 ----------------VEAVGNRVTVMMDGGITQGTDVYKALALGAKMVFIGRAALWGLA 341 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ V ++ LR E +M + G K V+++ N Sbjct: 342 VNGQHGVEDVLDLLRLELDSAMAISGCKTVKQICENHV 379 >gi|296118276|ref|ZP_06836857.1| L-lactate dehydrogenase [Corynebacterium ammoniagenes DSM 20306] gi|295968834|gb|EFG82078.1| L-lactate dehydrogenase [Corynebacterium ammoniagenes DSM 20306] Length = 425 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 73/376 (19%), Positives = 128/376 (34%), Gaps = 78/376 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++R++K F++ LI + L S EVD S G S P I+ TG M Sbjct: 61 AQSETTLNRSRKLFNEIELIPKILH--STPEVDLSTTIAGGPSSLPFGIAP-TGFTRFMH 117 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ--------------RVMFSDHNAIKSFEL-----RQY 113 A +A K + ++ + D + + F+L R+ Sbjct: 118 SEGEDAGAASAAKAGIPFSLSTMGTRSIEEVAQASEKSKNSKDGSGRRWFQLYLWKDREA 177 Query: 114 APHTVLIS-NLGAVQLNYDFGVQKAHQ----------------AVHVLGADGL------F 150 + + + N G L A Q A VL A F Sbjct: 178 SRDLLERAQNEGFDTLLVTVDTPVAGQRLRDVRNGMTIPPQLTAKTVLDASYRPEWWFNF 237 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDI 200 L +PL N ++ L + + + S LL+K + L++ D Sbjct: 238 LTTDPLTFASLTNTASDLPTLINAMFDPSLSIEDLEWIRSIWPGRLLVKGI---LTAEDT 294 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEA 259 L +G ++ GG R + +L R Sbjct: 295 RRALDAGADGLIVSNHGGRQLDRSP------------------VSIQALTEVRKEAGPGV 336 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFL 318 + I G+ +G DI+ ++ LGA + +L M + V I+ L +E +M L Sbjct: 337 EIILDSGVMSGSDIVAALGLGADFVLIGRAYLYGLMAGGEEGVDKVIDLLAEEVRNAMLL 396 Query: 319 LGTKRVQELYLNTALI 334 +GT+ +++L + +I Sbjct: 397 MGTRTIEDLKNSGQVI 412 >gi|146415610|ref|XP_001483775.1| hypothetical protein PGUG_04504 [Meyerozyma guilliermondii ATCC 6260] Length = 378 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 119/342 (34%), Gaps = 58/342 (16%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + NK +D + L R + +++ + + LG ++FPL IS N + + Sbjct: 41 QTLGENKATYDRYKLRPRVMVDVTSVD--TTTTSLGSTVAFPLGISPSA---NHGMAHPD 95 Query: 77 RNLA--IAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLIS---NLGAVQLN 129 L AA K V M + S ++ + +V++ N+ ++ Sbjct: 96 AELGTSRAAAKKGVNMILSSWTNSSPKDVAKQGENSGIAYAHQLSVVMDEPTNMSIIKNA 155 Query: 130 YDFGVQKA----------HQAVHVLGADGLFLHL-----------NPLQEIIQPNGNTNF 168 + G + + + + + LHL N + + I + Sbjct: 156 EECGYKALFISVDCPWLGRRLNEMRNSFTVPLHLKYPCYPWIDSTNMVSDDI--RTQYDA 213 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + I L ++ + LK + L++ D L + +G ++ GG Sbjct: 214 SLTWDYIRQLKKKTNMQIWLKGI---LTAEDAALAVDAGADGILVSNHGGRQLDGA---- 266 Query: 229 DLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + T +L E+ GG+R G DI K++ LGA + Sbjct: 267 --------------MSTLEALPEIVEAVKGRIPVHIDGGIRRGSDIFKALALGADYCWIG 312 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 L A + V A+ L EF + M L+G K V ++ Sbjct: 313 RIALWGLAYNGEKGVSLALNILHDEFRLVMALMGCKSVSDIK 354 >gi|332671819|ref|YP_004454827.1| L-lactate dehydrogenase (cytochrome) [Cellulomonas fimi ATCC 484] gi|332340857|gb|AEE47440.1| L-lactate dehydrogenase (cytochrome) [Cellulomonas fimi ATCC 484] Length = 403 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 115/360 (31%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R + F + L VD + FLG+ + P + TG M Sbjct: 59 AEAEISLRRARSLFRNIEFRPSILH--DVSAVDTTTRFLGRPSAQPFGFAP-TGFTRMMH 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFEL-----RQYAPHTVLIS 121 R + AE+ + A+ + D +A K F+L R + + Sbjct: 116 HEGERAVVRVAERRDIPYALSTMGTTSIEDVAAAAPDARKWFQLYVWKDRSAGEDLMARA 175 Query: 122 NLG---AVQLNYDFGVQKAHQ-----------AVHVLGADGLFLH----LN-----PLQE 158 A+ L D V A A+ V H LN PL+ Sbjct: 176 KAAGYEALMLTVDVPVAGARLRDTRNGFAIPPALTVKTVLDAATHPAWWLNLLTTEPLRF 235 Query: 159 IIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + A+L K+ L ++ D PL++K + + D +G Sbjct: 236 ASLSTWDGTVAELLDKLFDPTMTIADLEWLRASWDGPLIIKGIQ---TVDDARRVTDAGA 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L D+ + + G+ Sbjct: 293 DAIVLSNHGGRQLDRAPVPARLLPDV-----------------VEAVGDRTEVWVDTGIL 335 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G D++ ++ LGA + +L M + V A E L +E +M LLG V +L Sbjct: 336 SGADVVAALALGARATLVGRAYLYGLMAGGERGVDRAAEILSREVRRTMALLGVASVDQL 395 >gi|312210386|emb|CBX90473.1| similar to mitochondrial cytochrome b2 [Leptosphaeria maculans] Length = 521 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 118/357 (33%), Gaps = 88/357 (24%) Query: 32 IHRAL---PEISFDEV--DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN----LAIA 82 ++R++ P + D V D S FLG + P+ +S M N + +A A Sbjct: 163 VYRSILLRPRVFVDCVRCDTSTSFLGHDVKLPIYVSPAA-----MARLANPDGEWGIAHA 217 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLISNLGAVQ---- 127 EK AM + SQ + +K + + A +++ + + Sbjct: 218 CEKFG-AMQIISQNASMTPEQIVKDAAPGQVFGWQLYVQTERAKSEAMLARMNKLDSIKF 276 Query: 128 --LNYDFGVQKAHQAVHVLGADGLFLHLNP-LQE---------------------IIQPN 163 L D V + L + +QE Sbjct: 277 ICLTLDAPVPGKRELDERSKNISSNLPVRAAVQEDQSVSKTSTDAKTPSQDKEKPKSMGM 336 Query: 164 GNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAG 215 G + F + + L+ D P++LK + + D L ++ ++ Sbjct: 337 GQSLFWGTAADLTWRTTLPWLAKHTDKPIVLKGIQ---THEDAYLASLHAPHVKAIILSN 393 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGV 271 GG + P +L R YC E + GG++ G Sbjct: 394 HGGRALDTAP------------------PAVHTLLEIRKYCPEVFDRIEVWVDGGVKRGT 435 Query: 272 DILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D++K++ LGA G+ L + V +E L+ E M LLG ++V++L Sbjct: 436 DVVKALCLGARGVGVGRAALFGLGAGGKEGVARVLEILKAETETCMRLLGVEKVEQL 492 >gi|171684671|ref|XP_001907277.1| hypothetical protein [Podospora anserina S mat+] gi|170942296|emb|CAP67948.1| unnamed protein product [Podospora anserina S mat+] Length = 524 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 114/352 (32%), Gaps = 68/352 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLG--KKLSFPLLIS--SMT-GGNNKMIERI 75 N + + L R + + D + LG KL+ PL +S +M + I Sbjct: 162 YNNTVYRNILLRPRVF--VDVTKADTTTSILGGAFKLATPLYVSPAAMARLAHPDGEAGI 219 Query: 76 NRNLAIAAEKTKV---AMAVGSQRVMFSDHNAIKSFEL---RQYAPHTVLISNL------ 123 + ++ V A Q V + + I ++L A +++ + Sbjct: 220 AKGISRFGAMQLVSHNASMSPEQIVAEAKPDQIFGWQLYVQNARAKSEAMLARIAKLPQY 279 Query: 124 GAVQLNYDFGVQKAHQAVH--VLGADGLFLHLNPLQEIIQPNGNTNFAD----------- 170 + L D V + L A+ L +E + + Sbjct: 280 KCIVLTLDAPVPSKREHDEKAALEAELLIEASKSEEEKEKAKKRPDSNSGVGQQLFFGTA 339 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG------IRYFDIAGRGGTS 220 + + L+ +P++LK + + D+ L + ++ ++ GG S Sbjct: 340 ADLTWDTTLPWLAKHTKLPIVLKGIQ---THEDVYLAAQYAKKHPGTVKAVILSNHGGRS 396 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKS 276 P +L + YC E + GG+R G D++K+ Sbjct: 397 LDTAP------------------PAVHTLLECKKYCPEVFDIIEIWVDGGIRRGTDVVKA 438 Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ L V E L+ E M ++G K + EL Sbjct: 439 LCLGAKAVGVGRAALYGLGAGGWKGVERTFEILQGEIQTCMKMMGAKDISEL 490 >gi|212704900|ref|ZP_03313028.1| hypothetical protein DESPIG_02967 [Desulfovibrio piger ATCC 29098] gi|212671671|gb|EEB32154.1| hypothetical protein DESPIG_02967 [Desulfovibrio piger ATCC 29098] Length = 340 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 107/317 (33%), Gaps = 37/317 (11%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N++ + L AL E + LG LSFP++ + + G + M + ++ + I Sbjct: 46 NREALNACKLNMTALH--DAREPRTNCTILGIDLSFPVMAAPIGGVSFNMSDAMSEDDYI 103 Query: 82 AA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A V G F A+K L+ H + + ++ + Sbjct: 104 FAILEGSRAAGVIGCTGDGVPPFIIDAAVK--ALKACNGHGIPFIKPWEGKELFEKIDRV 161 Query: 137 AHQAVHVLGADGLFLHLNPLQEI---IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 +LG D L L+++ + P T + M ++K + Sbjct: 162 LADGSPILGVDVDAAGLITLRKMGRPVMPMSVTE----LETVVRYVHDMGRKFIVKGI-- 215 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ D + +G ++ GG + I Sbjct: 216 -MTPDDAHRAIDAGCDAIVVSNHGGRVLDHCPGTATVLPAIAD----------------- 257 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + +A G +R+GVD+LK + LGA + P A+ + V + ++ + Sbjct: 258 AVRGKITILADGAVRDGVDVLKMLALGADAVLVGRPLCIAAIGGGVEGVTKYWQQMQGQL 317 Query: 313 IVSMFLLGTKRVQELYL 329 + +M L G + ++ Sbjct: 318 VQAMLLTGCASLADVRE 334 >gi|189191088|ref|XP_001931883.1| cytochrome b2, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973489|gb|EDU40988.1| cytochrome b2, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 413 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 111/325 (34%), Gaps = 40/325 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEI-SFDEVDPSVEFLGKKLSFPLLISSMT-GGNNK 70 + N + F + L R L ++ + LG S P+ IS GG Sbjct: 96 AAGEWSYRNNLEIFQRFRLRPRFLTDVTNVPN-TMPTTILGHNFSSPIFISPCARGGYAN 154 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVM-FSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA A + + + D A ++ + + L NL + + Sbjct: 155 DAGEVG--LAKGAGEAGILYMPSLYSSIPMEDIYAARASKDQVMFQQIYLNGNLSSTKAL 212 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIALLSS 180 +D LGA GL + ++ I+ L + Sbjct: 213 FDK--------AKSLGAKGLVITVDSAGSAIRHRAARYGVGSANTQLTKLTWEVFQQLQN 264 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 D+PL+ K + + D + +K G++ ++ GG S + +I + Sbjct: 265 LTDLPLIPKGIQ---TVEDTQEAVKQGVKAVFLSNHGGRQIDGSPSTLQVAMEIHQRDPE 321 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + + A GG+R G DILK + LG G+ PF+ + +D Sbjct: 322 --------------LFKKIEIYADGGIRYGTDILKLLALGVKAVGVGRPFMFANIYGADG 367 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 V A + L+ E I+ +G ++ Sbjct: 368 VKKAADLLKNELIMDAANMGVSDLK 392 >gi|254497422|ref|ZP_05110220.1| L-lactate dehydrogenase [Legionella drancourtii LLAP12] gi|254353349|gb|EET12086.1| L-lactate dehydrogenase [Legionella drancourtii LLAP12] Length = 408 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 66/372 (17%), Positives = 119/372 (31%), Gaps = 77/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + ++ E G+KL+ P++IS + G M Sbjct: 59 AYAEYTLRTNVADLSEVILRQRVLK--NVAQLSLDTELFGQKLTMPVIISPV--GLMGMY 114 Query: 73 ERINRNL-AIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGAV 126 R L A AA K + + + V + + +S F+L + + L Sbjct: 115 ARRGEVLVAKAAAKIGIPYTLSTLSVCSMEEVSAQSPNPIWFQLYVLKDRGFMKNVLERA 174 Query: 127 Q--------LNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPN-------------- 163 Q D V A G G LQ I+ P+ Sbjct: 175 QGCGITHLVFTVDMPVPGARYRDAHSGMSGPFARQRRFLQAIMNPSWALDVGIMGRPHEL 234 Query: 164 -----------GNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G ++ + + + P+++K + L D + Sbjct: 235 GNVSKYLGKAVGLEDYMGWLNSNFDPSISWSDLEWIRDFWKGPMIIKGI---LDPEDAKD 291 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 + G ++ GG + + T +L +A N+ Sbjct: 292 AVTFGADGIVVSNHGGRQLDGV------------------LSTAKALPIIADAVGNKITL 333 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R+G+D+++ + LGA L P A V +E + KE V+M L G Sbjct: 334 LVDSGIRSGLDVVRMLALGAKAVLLGRPTAYAVAAKGQAGVEYMLELIAKEMHVAMALTG 393 Query: 321 TKRVQELYLNTA 332 K E+ + Sbjct: 394 VKSTSEINQSNL 405 >gi|218282712|ref|ZP_03488919.1| hypothetical protein EUBIFOR_01505 [Eubacterium biforme DSM 3989] gi|218216413|gb|EEC89951.1| hypothetical protein EUBIFOR_01505 [Eubacterium biforme DSM 3989] Length = 340 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 107/327 (32%), Gaps = 56/327 (17%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI------ER 74 RN + + + + + V +E G +P+ + G Sbjct: 50 RNYDAWKNIRVNMDTI--TDNEPVSTELELFGHTFKYPIFAGPV-GAVGMHYSDAYDDNG 106 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAI--KSFELRQYAPHTV-------LISNLGA 125 N L + G D N + + +++ + + L + L Sbjct: 107 YNDILVRGCMNAGICAFTGDG----KDPNIMINATRIIKENNGYGIPTVKPWSLETYLEK 162 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + L + V G L L+ P G N + ++ + S VP Sbjct: 163 LDLALNSNAFAVAMDVDAAG-------LPFLKGCQPPAGRMN----TEQLKAIISNTPVP 211 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++K V +S ++G ++ GG + + T Sbjct: 212 FIVKGV---MSVKGALKAKEAGASAIVVSNHGGRVQDQTPA------------------T 250 Query: 246 PLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVA 303 LE + + GGLRNGVDI K++ LGA +A PF+ + + Sbjct: 251 AEVLEEIVKAVDGRMKIFVDGGLRNGVDIFKALALGADAVIVARPFVNAIYGAKEEGIQV 310 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ L E + +M + G K ++++ + Sbjct: 311 LVDKLGSELVDTMEMCGAKSLKDITRD 337 >gi|270291350|ref|ZP_06197572.1| lox; lactate oxidase [Pediococcus acidilactici 7_4] gi|270280196|gb|EFA26032.1| lox; lactate oxidase [Pediococcus acidilactici 7_4] Length = 369 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 121/345 (35%), Gaps = 51/345 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + +N+ F + +AL I ++ + + E G L+ P++++ G Sbjct: 46 DEWTLKQNRMAFHHRQIAPKALSGI--EKPELNTEIFGIPLNTPVMMAPAAAQGLAHSQG 103 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSD-------HNAIKSFELRQYAPHTVLI-----S 121 + +AA +A + S + + + + + + L+ + Sbjct: 104 EKDTARGLAAVGGLMAQSTYSSVSIAETAAAGGDAPQFFQLYMSKDWNFNESLLDEAKKA 163 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS-------- 173 N+ A+ L D V +A + L I GN + Sbjct: 164 NVKAIILTVDATVDGYREADIK---NKFTFPLPMANLIKFSEGNGQGKGIEEIYASAAQN 220 Query: 174 ----KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ ++P+++K + + D + +G ++ GG + + D Sbjct: 221 IRPEDVKRIADYTNLPVIVKGIQ---TPEDAIRAIDAGAAGIYVSNHGGRQLNGGPASFD 277 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + DI + I G+R G D+ K++ GA L L P Sbjct: 278 VLEDIAT-----------------AVNKQVPIIFDSGVRRGSDVFKALASGADLVALGRP 320 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + A+ + V + E L E + M L GTK ++++ N+ L Sbjct: 321 VIYGLALGGAKGVQSVFEHLNHELEIVMQLAGTKTIEDVKNNSLL 365 >gi|323499168|ref|ZP_08104146.1| L-lactate dehydrogenase [Vibrio sinaloensis DSM 21326] gi|323315801|gb|EGA68834.1| L-lactate dehydrogenase [Vibrio sinaloensis DSM 21326] Length = 379 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 117/373 (31%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + + L R L E+ E G+K++ P+ +S + TG + E Sbjct: 32 EHTLRRNTEDLAEIALKQRVL--NDMSELSLDTEIFGEKMALPIALSPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AAE + + + + + L R + + + + Sbjct: 90 V---QAAKAAENKGIPFTMSTVSVCPIEEVTPAIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQPN-------------- 163 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAARRV--FQAMRHPQWAFDVGLFGKPHDL 204 Query: 164 -----------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGEPTKLEDYIGWLGDNFDPSISWKDLEWIRDFWDGPMVIKGI---LDVEDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------MSSAKALPSIADAVKGDMKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R G+D+++ + +GA L ++ A V ++ KE V+M L G Sbjct: 304 FVDSGIRTGLDVVRMLAMGADCAMLGRSYIYALAAQGQAGVENLLDLYEKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +Q+L ++ + Sbjct: 364 AKSIQDLNRDSLV 376 >gi|260786697|ref|XP_002588393.1| hypothetical protein BRAFLDRAFT_199062 [Branchiostoma floridae] gi|229273555|gb|EEN44404.1| hypothetical protein BRAFLDRAFT_199062 [Branchiostoma floridae] Length = 302 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 115/325 (35%), Gaps = 62/325 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 + LI R L +++ D SV LG +L P+ I+ T + A A Sbjct: 7 RYRLIPRNLRDVNIR--DTSVTVLGSRLDLPVAIAP-TAVHKVAHPDAEAATAKGAASMN 63 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHT-----VLISNLGAVQLNYDFGVQKAHQAVH 142 MA+ S + ++ + AP +L ++A A Sbjct: 64 TLMALSSWSSQSLE-------QVAEAAPRGVRWFYMLFYRDRGRMKRLLERAERAGYAAI 116 Query: 143 VLGAD-------------GLFLHL-NPLQEIIQP---NGNTNFADL---------SSKIA 176 VL D +HL N + QP + A L + Sbjct: 117 VLTVDQPLFPDSIRRKPASFPVHLPNVWIDDDQPGPLGSMEHGAGLAKIAKEAATWEDVK 176 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + +P++LK + LS+ D + + G+ ++ GG + + D+ DI Sbjct: 177 WIKNNTRLPVVLKGI---LSAEDARIAVDLGVAGIYVSNHGGRQQDGVPATIDVLPDI-- 231 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAM 295 EA+ GG+R G D+LK++ LGA + P L A+ Sbjct: 232 ---------------VGAVGGEAEVYLDGGVRTGTDVLKALALGARCVFIGRPALWGLAL 276 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLG 320 + ++ V ++ L+ E ++M G Sbjct: 277 NGAEGVEEVLQVLKHELSIAMARAG 301 >gi|170679931|ref|YP_001745907.1| L-lactate dehydrogenase [Escherichia coli SMS-3-5] gi|259494982|sp|B1LK44|LLDD_ECOSM RecName: Full=L-lactate dehydrogenase [cytochrome] gi|170517649|gb|ACB15827.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli SMS-3-5] Length = 396 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|92113203|ref|YP_573131.1| (S)-2-hydroxy-acid oxidase [Chromohalobacter salexigens DSM 3043] gi|91796293|gb|ABE58432.1| (S)-2-hydroxy-acid oxidase [Chromohalobacter salexigens DSM 3043] Length = 399 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 72/375 (19%), Positives = 133/375 (35%), Gaps = 78/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ + + L + D + LG ++S P++I TG N + Sbjct: 40 ADDEVSLRNNRAVFNRYRFTPKTL--TDVSQRDLGRDLLGHRVSMPVVIGP-TGFNGMIT 96 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIKSFELRQY 113 + + LA AA + + + Q + DH+ +K+ R Sbjct: 97 QDGDSKLARAAADRGIPFTLSNASTEPLEEIAKVPGGWPWMQIYFYRDHDYVKNLVDRCR 156 Query: 114 AP--HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFA 169 A T++++ A+ N ++ + + + + L + P +++++ P+G F Sbjct: 157 ASGYDTIVVTTDSAIYGNREWDTRNYARPFVLNWRNKLHVLSRPRWMKDVLYPHGVPTFK 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L LL+K + LS + + Sbjct: 217 NLGDLLPPEDSSVQGAAAEIGKHLMPSLNWEDIRWLRDNWSGNLLIKGI---LSVEEARM 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQF 261 ++ GI ++ GG + L R + Sbjct: 274 AVEYGIDGIVLSNHGGRQLDSS------------------VSPMEILPEVRAAVGDALTI 315 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + GG R G DILK+++LGA L L A V A+ L KE ++ LLG Sbjct: 316 LLDGGFRRGSDILKAVLLGADAVLLGRTTLYGLGAGGQAGVEHALGLLHKEMDRTLGLLG 375 Query: 321 TKRVQELYLNTALIR 335 +QEL + +LIR Sbjct: 376 CSNLQEL--DRSLIR 388 >gi|309774726|ref|ZP_07669749.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 3_1_53] gi|308917499|gb|EFP63216.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 3_1_53] Length = 341 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 49/303 (16%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA------EKTKVAMAVGSQR 96 E+D + EF G +S P+ + ++G ++ A +A Sbjct: 67 EIDTTSEFFGHTVSLPVYAAPISGILQNYGAELDDMSYTRALVDGSLRAGTLAFTGDGMH 126 Query: 97 --------VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 + +H+ ++ ++ + +QL + + G Sbjct: 127 DEMFQGPMSVVKEHDGFGVPTIKPWSKEHMAW----RIQLAKEAHALAIASDIDASGLTN 182 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 L + P+ F ++ + DVP +LK + LS L++G Sbjct: 183 LRTSITPV----------GFKNVEELKEITKICGDVPFILKGI---LSVKGARKALEAGA 229 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG S ++ DI + + G R Sbjct: 230 SGIIVSNHGGRVLDDCMSGIEVLEDI-----------------VKVADGRMKVFVDGAFR 272 Query: 269 NGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G D+ K++ LGA + P + + D SD +V E +R E +M + G K +Q++ Sbjct: 273 TGNDVFKALALGADGVLIGRPVSQAVIGDGSDGLVTYFEKIRLELKEAMAMAGCKTIQDI 332 Query: 328 YLN 330 + Sbjct: 333 TRD 335 >gi|219115591|ref|XP_002178591.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] gi|217410326|gb|EEC50256.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] Length = 431 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 121/374 (32%), Gaps = 73/374 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R K + ++ + ++ L I +D S + G+ ++ P T GN Sbjct: 60 ADDEISLRRGKDAYSEFEMHYKVLAGIKPP-LDLSTKIFGQDVTLPFFGCP-TAGNRMFH 117 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM--------FSDHN--AIKSFELRQYAPHTVLISN 122 A AAE + S F+ + ++ R+ + + Sbjct: 118 WEGETAAAKAAEHHGTMYGLSSLATTGITEIGELFNGPKVFQLYVWKDRELVKDVLAKAK 177 Query: 123 LG---AVQLNYDF-----------------GVQKAHQAVHVLG-----ADGLF------- 150 G A+ L DF Q + + D L Sbjct: 178 EGGFNALALTVDFTWYGNRERDIRNDFSIPPKYNITQTIEAIRKPAWTYDFLSHEPYTYA 237 Query: 151 -----LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + L + + F+ + L + P K V + D + ++ Sbjct: 238 CINTDVPADSLAAFVNSQLSPEFSWSDA--EWLLGEWNGPAAPKGV---VRPEDAKKAIE 292 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ G + D+ S+ A + + I G Sbjct: 293 IGFSSIWVSNHGARQLETSPATIDVLP---------------SIRAA--VGPDVEIIMDG 335 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G++ G DI K++ LGA G+ P+L A + V+ A + L+ E +M LLGT V Sbjct: 336 GVQRGTDICKALALGADAVGVGKPYLWGLAAGGTAGVIKAYDILKVELDRAMGLLGTPTV 395 Query: 325 QELYLN-TALIRHQ 337 L +LI+ + Sbjct: 396 AALKKEGPSLIKRR 409 >gi|240273771|gb|EER37290.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus H143] gi|325094795|gb|EGC48105.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus H88] Length = 495 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 121/357 (33%), Gaps = 66/357 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMIERINRNL 79 N + L R I + D S LG KL P+ + ++M + E + Sbjct: 145 NNTVYRSILLRPRVF--IDCTKCDLSTNVLGHKLGLPIYVCPAAMARLAHPAGE---AGI 199 Query: 80 AIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----L 123 A A K A + V + + + ++L R+ + + N + Sbjct: 200 AAACSKFGAMQLISNNASMTPEEIVQNATDDQVFGWQLYVQTERKKSEAMLARINKLKSI 259 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFAD----- 170 V L D V + A ++ L + G FA Sbjct: 260 KFVCLTLDAPVPGKREHDERTRALAQTTSVSSLLKASGGMAIEGGAGIGQQLFAGTDSSL 319 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++ + L+ ++P++LK + + I ++ ++ GG Sbjct: 320 TWTTTLPWLAQHTNLPIVLKGLQTHEDAY-IASLHAPQVKAIILSNHGGREMDTA----- 373 Query: 230 LESDIGIVFQDWGIPTPL-SLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLG 284 PT + ++ R +C E + GG+R G D++K++ LGA Sbjct: 374 --------------PTAVHTMMEIRKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGARCV 419 Query: 285 GLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ P + V +E L E +M LLG ++V +L ++N + Q Sbjct: 420 GVGRAPLFGLGAGGVEGVERVLEILSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 476 >gi|148557532|ref|YP_001265114.1| L-lactate dehydrogenase [Sphingomonas wittichii RW1] gi|148502722|gb|ABQ70976.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] Length = 384 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 112/376 (29%), Gaps = 82/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L +D S E G+KL+ P+ ++ + G + Sbjct: 29 AYAEVTLRRNIADLEAIALRQRVL--RDVSAIDLSTELFGQKLAMPVALAPVGLAGLTAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQYAPHTVLIS- 121 E AAE + + + S + + +R A L++ Sbjct: 87 RGEV---QAVRAAEAAGIPFTLSTVSACPLAEVARGASKPFWFQLYMIRDRAFMRDLLAQ 143 Query: 122 ----NLGAVQLNYDFGVQKAHQAVHVLGADGL-----FL--------------------- 151 N A+ D V G G L Sbjct: 144 AVEANCSALVFTIDMPVPGTRYRDRRSGLSGAPGLGGQLRRIGQAMMRPGWAWDVGLLGR 203 Query: 152 --HL-NPLQEIIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSM 198 HL N + G +F + + S PL+LK + L Sbjct: 204 PHHLGNVAPVLGGRKGMEDFFAWVGGNFDPGIHWRDLDFIRSEWKGPLILKGI---LDPE 260 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCN 257 D + SG ++ GG + + T +L +A Sbjct: 261 DAREAVASGADGIVVSNHGGRQLDGV------------------LSTARALPPIADAVGG 302 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSM 316 + GG+R+G+D+++ + LGA L + V +E + E V+M Sbjct: 303 SLPILVDGGVRSGLDVVRLLALGADTVMLGRAWAYALAGGGQRGVAHLLELIEAEMRVAM 362 Query: 317 FLLGTKRVQELYLNTA 332 L G + + ++ Sbjct: 363 ALTGATSIAAIDRDSL 378 >gi|156537674|ref|XP_001607878.1| PREDICTED: similar to ENSANGP00000018221 [Nasonia vitripennis] Length = 365 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 118/338 (34%), Gaps = 74/338 (21%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR----NLAIAAEKTKVAMAVGSQ 95 + D S LG+K+S PL +S G ++ +AE + A S Sbjct: 55 NVANRDISTTVLGQKVSMPLGVSPT--GKQRLAHPSAECATAKATESAETVFILSAFSST 112 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN- 154 R+ E+ + AP ++ + + D + +A G + L ++ Sbjct: 113 RIQ----------EVAKAAPKGIMWMQT-MLHSDRDCTLHCVRRA-EEAGFKAIVLTIDN 160 Query: 155 ------------------------------PLQEI----IQPNGNTNFADLSSKIALLSS 180 +E+ +Q + + + ++S Sbjct: 161 AVLPKNKAHILDDIPDLSTAVYEDYFLTKMTAEEMGNVHLQIRKIIDQSLTWEAVEWMTS 220 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +P+++K V L++ D L +K G ++ G + + ++ Sbjct: 221 VTKLPIVVKGV---LTAEDALLAVKHGASAILVSNHGARQLDGTPAPIEALPEV------ 271 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 + ++ + GG+R G+D+ K++ +GA + + P L A + Sbjct: 272 -----------VKAVGDKVEVYVDGGVRQGIDVFKALAIGARMVFIGRPMLWGLACGGEE 320 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A +E +R+E + L G V+++ + L+ H+ Sbjct: 321 GARAVLEIMRREIDETFALAGCSNVEQISRDKDLVVHK 358 >gi|304385103|ref|ZP_07367449.1| lactate 2-monooxygenase [Pediococcus acidilactici DSM 20284] gi|304329297|gb|EFL96517.1| lactate 2-monooxygenase [Pediococcus acidilactici DSM 20284] Length = 369 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 121/345 (35%), Gaps = 51/345 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + +N+ F + +AL I ++ + + E G L+ P++++ G Sbjct: 46 DEWTLKQNRMAFHHRQIAPKALSGI--EKPELNTEIFGIPLNTPVMMAPAAAQGLAHSQG 103 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSD-------HNAIKSFELRQYAPHTVLI-----S 121 + +AA +A + S + + + + + + L+ + Sbjct: 104 EKDTARGLAAVGGLMAQSTYSSVSIAETAAAGGDAPQFFQLYMSKDWNFNESLLDEAKKA 163 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS-------- 173 N+ A+ L D V +A + L I GN + Sbjct: 164 NVKAIILTVDATVDGYREADIK---NKFTFPLPMANLIKFSEGNGQGKGIEEIYASAAQN 220 Query: 174 ----KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ ++P+++K + + D + +G ++ GG + + D Sbjct: 221 IRPEDVKRIADYTNLPVIVKGIQ---TPEDAIRAIDAGAAGIYVSNHGGRQLNGGPASFD 277 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + DI + I G+R G D+ K++ GA L L P Sbjct: 278 VLEDIAT-----------------AVNKQVPIIFDSGVRRGSDVFKALASGADLVALGRP 320 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + A+ + V + E L E + M L GTK ++++ N+ L Sbjct: 321 VIYGLALGGAKGVQSVFEHLNHELEIVMQLAGTKTIEDVKNNSLL 365 >gi|300939206|ref|ZP_07153887.1| L-lactate dehydrogenase [Escherichia coli MS 21-1] gi|300455887|gb|EFK19380.1| L-lactate dehydrogenase [Escherichia coli MS 21-1] Length = 396 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|297579975|ref|ZP_06941902.1| L-lactate dehydrogenase [Vibrio cholerae RC385] gi|297535621|gb|EFH74455.1| L-lactate dehydrogenase [Vibrio cholerae RC385] Length = 378 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 123/373 (32%), Gaps = 79/373 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN D L R L E+ E G+K++ P+ +S + G R Sbjct: 32 EHTLRRNSDDLADIALRQRVL--NDMSELSLETELFGEKMALPIALSPV-GLTGMYARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN--- 122 A AAE + + + V + A F+L R + + + + Sbjct: 89 EVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIQRPIWFQLYVLKDRGFMKNVLERAKAAG 148 Query: 123 LGAVQLNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP----------------- 162 + + D V A + G + + LQ + P Sbjct: 149 VKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRV--LQAMAHPSWAWDVGLLGKPHDLGN 206 Query: 163 ----NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ ++ + + D P+++K + L + D + + Sbjct: 207 ISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A + + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTVQALPAIADAVKGDLKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+++ + LGA L F+ A V ++ KE V+M L G K Sbjct: 306 DSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAK 365 Query: 323 RVQELYLNTALIR 335 + EL ++ + R Sbjct: 366 SIAELSRDSLVKR 378 >gi|284032199|ref|YP_003382130.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kribbella flavida DSM 17836] gi|283811492|gb|ADB33331.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kribbella flavida DSM 17836] Length = 403 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 115/360 (31%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R+++ F + L L + E+D LGK+ P + TG M Sbjct: 59 AESEISLQRSRRLFAEMELQPSIL--RNVSEIDLGTNILGKRSELPFAFAP-TGFTRMMN 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFEL-----RQYAPHTVLI- 120 + A++ + A+ + D +A K F+L R V Sbjct: 116 HEGESAVVKVAQQAGIPYALSTMGTTSIEDVAAAGPDARKWFQLYVWKDRDAGEDLVKRS 175 Query: 121 --SNLGAVQLNYDFGVQKAH--------------QAVHVLGAD------GLFLHLNPLQE 158 + A+ L D V A A VL A L PL Sbjct: 176 AAAGYEALMLTVDVPVAGARLRDVRNGFTIPPSLTAKTVLDASLHPAWWANLLTTRPLTF 235 Query: 159 IIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + A+L ++ L S D PL++K + + D + +G Sbjct: 236 ASLSSWDGTVAELLDQLFDPTMTIDDFNWLRSIWDGPLIVKGIQ---TVEDARRVVDAGA 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R + + D+ +A+ G+ Sbjct: 293 DAIVLSNHGGRQLDRAPTPLRILPDVRE-----------------AVGTDAEVYLDTGIM 335 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI+ ++ LGA + +L M V A + L KE +M LLG V L Sbjct: 336 TGADIVAALALGADACLVGRAYLYGLMAGGQRGVERATDILTKEIRRTMALLGVPSVDAL 395 >gi|332997601|gb|EGK17215.1| L-lactate dehydrogenase [Shigella flexneri K-272] Length = 392 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|242799353|ref|XP_002483360.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] gi|218716705|gb|EED16126.1| (S)-2-hydroxy-acid oxidase, putative [Talaromyces stipitatus ATCC 10500] Length = 493 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 105/353 (29%), Gaps = 68/353 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N ++ L R L G K P+ + + + Sbjct: 136 DSWTMAANHDWYKRIMLRPRVL--RDVSACRLETIIFGTKFGMPIFNAPA---SLVRMAH 190 Query: 75 INRNLAIA--AEKTKVAMAVGSQRVMFSD-------HNAIKSFELRQYAPHTVLISNL-- 123 LAIA A M + +D + F++ P +NL Sbjct: 191 PEGELAIARGASALGSTMIIPMMSSYSTDEIVEEMPPDHPFLFQV-YVHPDRKFTANLLQ 249 Query: 124 --------GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL---QEIIQPNGNTNFAD-- 170 A+ + D +A L +E P +T Sbjct: 250 DVCSRLKPIAIIVTVDLPAFPKREANERLAIKKAMEAEKAAMGGKESAPPGSSTASKGQN 309 Query: 171 -------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + I + +P++LK + S+ D E + G I+ G Sbjct: 310 QARSAGQNIASNLVWDDIEWIKKLTKLPVVLKGIQ---SAADAEKAYRLGCDGIYISNHG 366 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDI 273 G + +P+ L L + C E + GG+R G D+ Sbjct: 367 GRALDTS------------------MPSILVLMEIQMTCPEILDKMEVFIDGGIRRGTDV 408 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK+I LGA L P A S V A++ + E V+M L+G + E Sbjct: 409 LKAICLGAKGVCLGRPMFYAANYGSAGVEHALKLVADELQVAMQLVGINSLDE 461 >gi|315640235|ref|ZP_07895353.1| lactate 2-monooxygenase [Enterococcus italicus DSM 15952] gi|315484024|gb|EFU74502.1| lactate 2-monooxygenase [Enterococcus italicus DSM 15952] Length = 366 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 112/346 (32%), Gaps = 49/346 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N + F +I R L I D S E G L P++ + G + Sbjct: 42 DEWTLRENTQAFSKKKIIPRVLQGIDHA--DLSTELFGIPLKTPIIQAPSAAQGLAHVKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ-----------------RVMFSDHNAIKSFELRQYAPH 116 ++ + +A + A++ + ++ S +A F L + Sbjct: 100 EVDTAIGVAKAGSIFAISTYANTKIEDAAAAAPDAPQFFQLYMSKDDAFNQFLLDKAVQS 159 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN--------TNF 168 L + + + + + G Sbjct: 160 GAKAIILTVDSTLGGYREEDIVNDFTFPLPMPNLVAFSEASGAGEGKGKGISEIYVAAKQ 219 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 A + I + +P+++K + S+ D E+ ++ G ++ GG + Sbjct: 220 AIVPEDIQKIKKMSGLPVIVKGIQ---SAEDGEVAIQFGADGIWVSNHGGRQLDGAPASF 276 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ I A+ I G+R G + K++ GA + L Sbjct: 277 DVLPQI-----------------AQVVRKRVPIIFDSGVRRGEHVFKALASGADVVALGR 319 Query: 289 PFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 P + + ++ V + + L KE ++M L GTK ++++ T + Sbjct: 320 PIIYGLFLGGAEGVTSVFDHLNKELAITMQLAGTKTIEDVKQTTLV 365 >gi|209754884|gb|ACI75754.1| L-lactate dehydrogenase [Escherichia coli] Length = 396 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGELQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|322695490|gb|EFY87297.1| (S)-2-hydroxy-acid oxidase, putative [Metarhizium acridum CQMa 102] Length = 359 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 100/319 (31%), Gaps = 49/319 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + F + L R L +IS E S LG S P IS Sbjct: 73 AAGEYSYRNNLEVFRRYRLRPRVLVDISNIESTLSTTILGHNFSAPFFISPCARADYAHA 132 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-HTVLISNLGAVQLNY 130 IN AA + + S D F + A ++ + A N Sbjct: 133 NAEINFVKGAAAGNILYMLYLDSNETFNKD-----LFRRTEAAGAKAIVFTVDSAADGNR 187 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + A V + F+ + + +P++LK Sbjct: 188 H---RAARFGVGSADSSYSA-----------------FSWTFY--EQIRNQTKLPIILKG 225 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + ++ D + +K + ++ GG S ++ +I D Sbjct: 226 I---MTVEDAQEAVKRKVPAIILSNHGGRQLDGSPSSLEVALEIYRKDPD---------- 272 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 + + +A GG+R GVD + + LG GL PF+ + + V I+ ++ Sbjct: 273 ----LFKKIEVLADGGIRYGVDAIMLLSLGVKAVGLGRPFMYSNIYGQEGVEKVIQIMKH 328 Query: 311 EFIVSMFLLGTKRVQELYL 329 E + G + +L Sbjct: 329 EMAID---AGNLGIPDLKK 344 >gi|222637460|gb|EEE67592.1| hypothetical protein OsJ_25131 [Oryza sativa Japonica Group] Length = 326 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 99/307 (32%), Gaps = 53/307 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + ++D S LG + P++++ TGG+ Sbjct: 32 AEDEHTLRENIAAYTRIILRPRVL--VDVSKIDMSTTLLGYTMRSPIIVAP-TGGHKLAH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLIS 121 + A AA A+ V S + S ++ R + V + Sbjct: 89 PEGEKATARAAASCN-AIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRA 147 Query: 122 N---LGAVQLNYD---FGVQKAHQAVHVLGADGLFL----------HLNPLQEIIQPNGN 165 A+ L D G ++A ++ L N Q Sbjct: 148 ESCGFKALLLTVDTPMLGRREADIRNKMVFPRSGNLEGLMTTDDHDTTNGSQLERFARAT 207 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I L S +P+ LK + +++ D +++G+ ++ G Sbjct: 208 LDPSLSWKDIEWLKSITSMPIFLKGI---VTAEDARRAVEAGVAGVIVSNHGARQLDYAP 264 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + T +LE R + GG+R G D+ K++ LGA Sbjct: 265 A------------------TIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAV 306 Query: 285 GLASPFL 291 + P L Sbjct: 307 MVGRPVL 313 >gi|254295027|ref|YP_003061050.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hirschia baltica ATCC 49814] gi|254043558|gb|ACT60353.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hirschia baltica ATCC 49814] Length = 376 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 121/356 (33%), Gaps = 76/356 (21%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N L R L +D S E LG+K P+ + + G + R A Sbjct: 37 SNSADLRKVALRQRVLK--DVASIDLSTEILGQKQDLPVALGPV-GISGMFARRGEVQAA 93 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKS----FEL-----RQYAPHTVLISNL-GAVQL-- 128 +A K V + + + + + F+L R + + + GA L Sbjct: 94 SSASKAGVPACLSTVSICSIEEVVAATERFWFQLYVIRDRSVMLDIIERAKVAGAKALVF 153 Query: 129 -------------------NYDFGVQKAHQAVHVLGADGLFLHL--------NPLQEIIQ 161 + G+++ QAV A + + L N + + Q Sbjct: 154 TVDMPVPGSRARDVHSGMSGPNAGIRRIMQAVGKP-AWSVDVGLLGRPHTLGNLVAALGQ 212 Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 G ++ K + + SA D PL++K + L D + G Sbjct: 213 GAGINDYMGWLGKNFDPSIQWKDLEWIRSAWDGPLIIKGI---LDPEDAREAVALGADGI 269 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + T +L +A ++ +A GG+R+G Sbjct: 270 VVSNHGGRQLNGA------------------LSTAHALPAIAEAVGDQITVLADGGVRSG 311 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +D+++ + LGA L +L A S V + L+++ V+M L G + Sbjct: 312 LDVVRMLALGADGVLLGRLWLYALAAGGSAGVTQMFDFLKQDMKVTMTLAGVNSIS 367 >gi|326571183|gb|EGE21207.1| L-lactate dehydrogenase [Moraxella catarrhalis BC7] Length = 402 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 68/371 (18%), Positives = 128/371 (34%), Gaps = 71/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ +S P+ I+ TG + Sbjct: 36 QTTYRNNETDFDRIKLRQRVL--VDMDNRSLATQMIGQDVSMPVAIAP-TGFTGMIWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS---N 122 + A AAEK + ++ + + + A + F+L +++ + + + N Sbjct: 93 EIHAARAAEKFGIPFSLSTMSICSIEDVAENTTKPFWFQLYVMRDKEFMENLIKRAKAAN 152 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------FADL- 171 A+ L D V Q+ + L A N L + +P N F ++ Sbjct: 153 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLKNILNLMTKPEWCYNMLGTKRHTFRNIA 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + PL+LK + + D + + Sbjct: 213 GHAKNVSDLSSLSAWTAEQFDPGLSWDDVARIKDMWGGPLILKGI---MEPEDAIMAARF 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G I+ GG S +D ++ ++ + + G Sbjct: 270 GADAMVISNHGGRQLDGAPSSIASLTD--------------CVQASQAENSNCEVWLDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+I LGA + FL D V A+E + KE V+M G + Sbjct: 316 IRSGQDVLKAIALGAKGTMIGRSFLYGLGAYGEDGVRRALEIIYKECDVTMAFCGHTNIS 375 Query: 326 ELYLNTALIRH 336 + + L++ Sbjct: 376 TV-NSDILVKG 385 >gi|91213119|ref|YP_543105.1| L-lactate dehydrogenase [Escherichia coli UTI89] gi|218560680|ref|YP_002393593.1| L-lactate dehydrogenase [Escherichia coli S88] gi|237703376|ref|ZP_04533857.1| L-lactate dehydrogenase [Escherichia sp. 3_2_53FAA] gi|122421915|sp|Q1R4Z0|LLDD_ECOUT RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494971|sp|B7MFG9|LLDD_ECO45 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|91074693|gb|ABE09574.1| L-lactate dehydrogenase [Escherichia coli UTI89] gi|218367449|emb|CAR05231.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli S88] gi|226902640|gb|EEH88899.1| L-lactate dehydrogenase [Escherichia sp. 3_2_53FAA] gi|307628682|gb|ADN72986.1| L-lactate dehydrogenase [Escherichia coli UM146] gi|315285361|gb|EFU44806.1| L-lactate dehydrogenase [Escherichia coli MS 110-3] gi|323949847|gb|EGB45731.1| FMN-dependent dehydrogenase [Escherichia coli H252] gi|323954852|gb|EGB50632.1| FMN-dependent dehydrogenase [Escherichia coli H263] Length = 396 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|326479105|gb|EGE03115.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 492 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 126/355 (35%), Gaps = 68/355 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R + + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVM--RNVREVNTKSSILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A + + Sbjct: 198 ELGIARACQSRGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAAQLHECSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLTLPMVPAK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 313 IDPGLTWEDVKWARQHTHLPLLLKGVQ---SADDAAMAMEAGIDGIMLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + I T L L + + G+R G DILK++ LGA+ Sbjct: 370 AS---------------IITLLELHRRCPEVFDRMEIYIDSGIRRGTDILKAVCLGATAV 414 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 G+ FL + + I+ +R E +M +G + + Y+NTA I H Sbjct: 415 GMGRSFLFASNYGQEGAEHLIDIMRDELEGAMRNIGITSLDQAGPQYINTADIDH 469 >gi|298707257|emb|CBJ25884.1| Glycolate Oxidase [Ectocarpus siliculosus] Length = 404 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 117/340 (34%), Gaps = 69/340 (20%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA-AEKTKVAMAVGSQRVM 98 VD + LG++++ P+ IS + LA A A +M V S Sbjct: 85 DVSSVDTTRTVLGERMAHPIGISPTA---EHRAAHDDGELATARAAAGTCSMMVVSSSAT 141 Query: 99 --FSD------HNAIKSFE---------------LRQYAPHT-------VLISNLGAVQL 128 D N + F+ +R+ V LG + Sbjct: 142 TALEDVATAGGPNMQRWFQLSLSSRKNRTVLAGLVRRAIAAGYTALVVTVDRPVLGRREA 201 Query: 129 NYDFGVQKAHQAVH--VLGADGLFLHLNP--LQEIIQPNGNT----NFADLSS--KIALL 178 + + A + V+ A G + P ++ Q + + + + Sbjct: 202 DLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTI 261 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 D+ +++K V ++ E L G+ ++ GG + + ++ ++ Sbjct: 262 CG--DMKIVVKSV---MTREAAEEALAHGVDAVWVSNHGGRQLDTVPATIEILPEV---- 312 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + + GG+R G D+LK++ LGAS + P + S Sbjct: 313 -------------VQAVRGRCEIFVDGGIRRGTDVLKALALGASAVFIGRPVIWGLAHSG 359 Query: 299 D-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V I L +E + +M L+G K++ ++ + ++ HQ Sbjct: 360 EHGVTDVINLLNEELVQAMRLMGCKKLGDIERS--MVAHQ 397 >gi|242221233|ref|XP_002476369.1| predicted protein [Postia placenta Mad-698-R] gi|220724374|gb|EED78421.1| predicted protein [Postia placenta Mad-698-R] Length = 476 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 113/344 (32%), Gaps = 54/344 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNN 69 + N + F + R L I +VD S LG K S P+ S G+ Sbjct: 141 ADDELTNAENARAFSRFFFHPRVLRPI--SKVDVSTSILGIKSSIPVFASGAALAKLGHP 198 Query: 70 KMIERINRNLAIAAEKTKVAMAV-------GSQRVMFS-DHNAIKSFEL------RQYAP 115 I R A +T + V SQ + F+L R Sbjct: 199 LGEANITRG----AGRTNIIQMVSSNASLSPSQIAEARLSPSQPLFFQLYKHGDNRVAEQ 254 Query: 116 HTVLISNLG--AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + NLG A+ L D V + + L P+ ++ Sbjct: 255 RVREVENLGYRAIFLTVDAPVSGNRER-DIRAPFELEEQRRESDTSTAPDAQRTTGEMPR 313 Query: 174 KIALLSSAMDVPLLLKEVGCGLSS---------MDIELGLKSGIRYFDIAGRGGTSWSRI 224 + +D + L + D L ++G+ ++ GG S + Sbjct: 314 QPEDAEKELDNQVNFFGTAGALLANMDLDMTFTKDAVLAAEAGVDGILLSNHGGDSLPPL 373 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 E L VF ++ + GG+R G D+LK++ LGA Sbjct: 374 EVLYRLRQQRPDVF------------------DKLEVYIDGGVRRGTDVLKALCLGAKAV 415 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 GL PFL + VV A+ L++E ++ M LLG V EL Sbjct: 416 GLGRPFLYAQSAYGEAGVVQAVRILQREIVLGMRLLGATSVSEL 459 >gi|254295107|ref|YP_003061130.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hirschia baltica ATCC 49814] gi|254043638|gb|ACT60433.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hirschia baltica ATCC 49814] Length = 385 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 115/369 (31%), Gaps = 76/369 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N + L R L ++D S G+K++ P +++ + G R Sbjct: 31 DEVTLHQNVEALQKIALRQRVL--CDVSDIDLSTTLFGQKMALPAILAPV-GLAGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI-----S 121 A AAE+ + + + A K+ + +R A L+ + Sbjct: 88 GEVQAAQAAEEFGIPFTLSTVSACPLKEVASKTKRPFWFQLYMIRDRAFMKDLLQQAMEA 147 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD----------- 170 A+ D V A + G G L ++ I Q + +A Sbjct: 148 ECSALVFTTDMPVPGARYRDYHSGLAGSAGVLGDMRRIFQAIQHPQWAWDVGVCGRPHQL 207 Query: 171 ----------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 I + S PL++K + L D Sbjct: 208 GNVAPVLGNQTGLEDFFAWMRNNFDPSVTWEDIDFIRSIWKGPLIIKGI---LDKDDAIR 264 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG + + I + + Sbjct: 265 AADFGADGLIVSNHGGRQLDGVPASCHALPAIAE-----------------AVGSRVTIL 307 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A GG+RNG+DI++ + LGA+ L ++ A + V ++ E V+M L G Sbjct: 308 ADGGVRNGLDIVRLMALGANGVLLGRSWIYALAAEGKHGVSKMLDLFAAEMKVAMTLTGV 367 Query: 322 KRVQELYLN 330 R +++ + Sbjct: 368 TRPEQINQS 376 >gi|215488885|ref|YP_002331316.1| L-lactate dehydrogenase [Escherichia coli O127:H6 str. E2348/69] gi|312968053|ref|ZP_07782264.1| L-lactate dehydrogenase [Escherichia coli 2362-75] gi|259494970|sp|B7ULG1|LLDD_ECO27 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|215266957|emb|CAS11402.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O127:H6 str. E2348/69] gi|312287312|gb|EFR15221.1| L-lactate dehydrogenase [Escherichia coli 2362-75] Length = 396 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLHRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|15804149|ref|NP_290188.1| L-lactate dehydrogenase [Escherichia coli O157:H7 EDL933] gi|15833737|ref|NP_312510.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|24114874|ref|NP_709384.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 301] gi|30065119|ref|NP_839290.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|74314158|ref|YP_312577.1| L-lactate dehydrogenase [Shigella sonnei Ss046] gi|110807719|ref|YP_691239.1| L-lactate dehydrogenase [Shigella flexneri 5 str. 8401] gi|157159353|ref|YP_001465088.1| L-lactate dehydrogenase [Escherichia coli E24377A] gi|168746845|ref|ZP_02771867.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4113] gi|168753428|ref|ZP_02778435.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4401] gi|168759702|ref|ZP_02784709.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4501] gi|168766024|ref|ZP_02791031.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4486] gi|168772429|ref|ZP_02797436.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O157:H7 str. EC4196] gi|168779760|ref|ZP_02804767.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4076] gi|168785482|ref|ZP_02810489.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC869] gi|168797448|ref|ZP_02822455.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC508] gi|191168147|ref|ZP_03029944.1| L-lactate dehydrogenase [Escherichia coli B7A] gi|193068484|ref|ZP_03049446.1| L-lactate dehydrogenase [Escherichia coli E110019] gi|195935134|ref|ZP_03080516.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4024] gi|208806796|ref|ZP_03249133.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4206] gi|208812631|ref|ZP_03253960.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4045] gi|208819289|ref|ZP_03259609.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4042] gi|209396531|ref|YP_002273087.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4115] gi|209921078|ref|YP_002295162.1| L-lactate dehydrogenase [Escherichia coli SE11] gi|217325104|ref|ZP_03441188.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14588] gi|218556170|ref|YP_002389083.1| L-lactate dehydrogenase [Escherichia coli IAI1] gi|218697329|ref|YP_002404996.1| L-lactate dehydrogenase [Escherichia coli 55989] gi|254795563|ref|YP_003080400.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14359] gi|260857997|ref|YP_003231888.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O26:H11 str. 11368] gi|260870338|ref|YP_003236740.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O111:H- str. 11128] gi|261224210|ref|ZP_05938491.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli O157:H7 str. FRIK2000] gi|261254821|ref|ZP_05947354.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O157:H7 str. FRIK966] gi|291284979|ref|YP_003501797.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O55:H7 str. CB9615] gi|300815155|ref|ZP_07095380.1| L-lactate dehydrogenase [Escherichia coli MS 107-1] gi|300923392|ref|ZP_07139433.1| L-lactate dehydrogenase [Escherichia coli MS 182-1] gi|301325290|ref|ZP_07218797.1| L-lactate dehydrogenase [Escherichia coli MS 78-1] gi|307315234|ref|ZP_07594812.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli W] gi|309797476|ref|ZP_07691867.1| L-lactate dehydrogenase [Escherichia coli MS 145-7] gi|81839373|sp|Q83PP7|LLDD_SHIFL RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81849041|sp|Q8XDF7|LLDD_ECO57 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|85540709|sp|Q3YVX0|LLDD_SHISS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|123342256|sp|Q0SYD1|LLDD_SHIF8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990700|sp|A7ZTF9|LLDD_ECO24 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494972|sp|B7L725|LLDD_ECO55 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494973|sp|B5YWA7|LLDD_ECO5E RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494976|sp|B7M492|LLDD_ECO8A RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494981|sp|B6I3I4|LLDD_ECOSE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|12518355|gb|AAG58752.1|AE005588_3 L-lactate dehydrogenase [Escherichia coli O157:H7 str. EDL933] gi|13363958|dbj|BAB37906.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|24054112|gb|AAN45091.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 301] gi|30043380|gb|AAP19101.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|73857635|gb|AAZ90342.1| L-lactate dehydrogenase [Shigella sonnei Ss046] gi|110617267|gb|ABF05934.1| L-lactate dehydrogenase [Shigella flexneri 5 str. 8401] gi|157081383|gb|ABV21091.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli E24377A] gi|187771658|gb|EDU35502.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O157:H7 str. EC4196] gi|188018474|gb|EDU56596.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4113] gi|189002661|gb|EDU71647.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4076] gi|189359194|gb|EDU77613.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4401] gi|189364369|gb|EDU82788.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4486] gi|189369483|gb|EDU87899.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4501] gi|189374302|gb|EDU92718.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC869] gi|189379973|gb|EDU98389.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC508] gi|190901816|gb|EDV61568.1| L-lactate dehydrogenase [Escherichia coli B7A] gi|192958135|gb|EDV88576.1| L-lactate dehydrogenase [Escherichia coli E110019] gi|208726597|gb|EDZ76198.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4206] gi|208733908|gb|EDZ82595.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4045] gi|208739412|gb|EDZ87094.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4042] gi|209157931|gb|ACI35364.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC4115] gi|209754878|gb|ACI75751.1| L-lactate dehydrogenase [Escherichia coli] gi|209754880|gb|ACI75752.1| L-lactate dehydrogenase [Escherichia coli] gi|209754882|gb|ACI75753.1| L-lactate dehydrogenase [Escherichia coli] gi|209754886|gb|ACI75755.1| L-lactate dehydrogenase [Escherichia coli] gi|209914337|dbj|BAG79411.1| L-lactate dehydrogenase [Escherichia coli SE11] gi|217321325|gb|EEC29749.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. TW14588] gi|218354061|emb|CAV00591.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli 55989] gi|218362938|emb|CAR00575.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli IAI1] gi|254594963|gb|ACT74324.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli O157:H7 str. TW14359] gi|257756646|dbj|BAI28148.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O26:H11 str. 11368] gi|257766694|dbj|BAI38189.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O111:H- str. 11128] gi|281602967|gb|ADA75951.1| L-lactate dehydrogenase [Shigella flexneri 2002017] gi|290764852|gb|ADD58813.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli O55:H7 str. CB9615] gi|300420302|gb|EFK03613.1| L-lactate dehydrogenase [Escherichia coli MS 182-1] gi|300532047|gb|EFK53109.1| L-lactate dehydrogenase [Escherichia coli MS 107-1] gi|300847817|gb|EFK75577.1| L-lactate dehydrogenase [Escherichia coli MS 78-1] gi|306905366|gb|EFN35904.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli W] gi|308118912|gb|EFO56174.1| L-lactate dehydrogenase [Escherichia coli MS 145-7] gi|313647522|gb|EFS11972.1| L-lactate dehydrogenase [Shigella flexneri 2a str. 2457T] gi|315062896|gb|ADT77223.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli W] gi|320191339|gb|EFW65989.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. EC1212] gi|320639514|gb|EFX09122.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. G5101] gi|320644953|gb|EFX13983.1| L-lactate dehydrogenase [Escherichia coli O157:H- str. 493-89] gi|320650220|gb|EFX18709.1| L-lactate dehydrogenase [Escherichia coli O157:H- str. H 2687] gi|320655572|gb|EFX23500.1| L-lactate dehydrogenase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661306|gb|EFX28730.1| L-lactate dehydrogenase [Escherichia coli O55:H7 str. USDA 5905] gi|320666320|gb|EFX33319.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. LSU-61] gi|323166911|gb|EFZ52650.1| L-lactate dehydrogenase [Shigella sonnei 53G] gi|323173198|gb|EFZ58827.1| L-lactate dehydrogenase [Escherichia coli LT-68] gi|323179423|gb|EFZ64990.1| L-lactate dehydrogenase [Escherichia coli 1180] gi|323182636|gb|EFZ68039.1| L-lactate dehydrogenase [Escherichia coli 1357] gi|323376511|gb|ADX48779.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli KO11] gi|324019717|gb|EGB88936.1| L-lactate dehydrogenase [Escherichia coli MS 117-3] gi|324116053|gb|EGC09979.1| FMN-dependent dehydrogenase [Escherichia coli E1167] gi|326337391|gb|EGD61226.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. 1044] gi|326339916|gb|EGD63723.1| L-lactate dehydrogenase [Escherichia coli O157:H7 str. 1125] gi|332749943|gb|EGJ80355.1| L-lactate dehydrogenase [Shigella flexneri K-671] gi|332751134|gb|EGJ81537.1| L-lactate dehydrogenase [Shigella flexneri 2747-71] gi|332764195|gb|EGJ94432.1| L-lactate dehydrogenase [Shigella flexneri 2930-71] gi|332996169|gb|EGK15796.1| L-lactate dehydrogenase [Shigella flexneri VA-6] gi|333012835|gb|EGK32212.1| L-lactate dehydrogenase [Shigella flexneri K-304] gi|333013349|gb|EGK32721.1| L-lactate dehydrogenase [Shigella flexneri K-227] Length = 396 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|163797216|ref|ZP_02191170.1| L-lactate dehydrogenase [alpha proteobacterium BAL199] gi|159177511|gb|EDP62065.1| L-lactate dehydrogenase [alpha proteobacterium BAL199] Length = 372 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 113/324 (34%), Gaps = 39/324 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN+ FD R L EVD FLG KL P+L+ + G+ + Sbjct: 48 SETTLRRNRLAFDRLAFRPRVL--RDMREVDTGGAFLGHKLRLPVLLCPI--GSLESFHP 103 Query: 75 IN--RNLAIAAEKTKVAMAVGSQRVMFSDHNAI-----KSFELRQYAPHTVLISNLG-AV 126 N R AA V++ + S + + A K F L + L +G A+ Sbjct: 104 -NGPRAAMQAAADFGVSLFLSSVGTVPLEEVATVQGGMKVFCLYKRGDDDWLDGVVGRAI 162 Query: 127 QLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADL-SSKIALLSSAMDV 184 YD A D + P Q G L + IA D+ Sbjct: 163 DHGYDAFAITVDSAWYSRRERDLANRFVKP---WRQVPGMEFQKALNWADIARFKKTYDI 219 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL+LK + ++ D + ++ G ++ GG D+ ++ Sbjct: 220 PLILKGIA---TAEDARMAIEHGADAVFVSNHGGRQLDHGAGALDVLPEV---------- 266 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVA 303 A GG+ G DI K+ LGA + G+ A + VV Sbjct: 267 -------VDAVRGRASVAVDGGVVRGTDIAKARALGADVVGIGRLLCCGLAAGGTAGVVR 319 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E L +E + + LLG + EL Sbjct: 320 VLELLEEEARIDLGLLGVQNFSEL 343 >gi|301060008|ref|ZP_07200882.1| dehydrogenase, FMN-dependent [delta proteobacterium NaphS2] gi|300445887|gb|EFK09778.1| dehydrogenase, FMN-dependent [delta proteobacterium NaphS2] Length = 398 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 100/294 (34%), Gaps = 32/294 (10%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGN--NKMIERINRNLAIA--AEKTK-VAMAVGSQRV 97 + DPS F KLS P++ SS G + N + ++ A + +A + Sbjct: 126 DPDPSFLFFDLKLSVPIMGSSTAGISRYNDAMGEVDFCRATIRGCREMGALAWRGDTWFY 185 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + A+ + E + V +KA + DG Sbjct: 186 TAENTPALDALESEGGYGVPIFKPRSQDVLKGLIERAEKAGCPATGVDLDG------CGS 239 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 I++ NG F + L + +P + K + ++ D E +++G+R ++ G Sbjct: 240 TIMERNGQPVFRKSIKDLKALVAFTSLPFIAKGI---MTPEDAEACVEAGVRVIAVSNHG 296 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G ++ I A A GG+R G D++K + Sbjct: 297 GRVLDHTPGVAEVLPAI-----------------VDRVGENALITADGGVRTGYDVIKML 339 Query: 278 ILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 LGA + ++ A+ V +E LR +M L G + + + Sbjct: 340 ALGADAVLIGRDVIRAAVGGGSLGVRLQMERLRNTLKRAMKLTGCPDLSAITSD 393 >gi|291228835|ref|XP_002734383.1| PREDICTED: hydroxyacid oxidase 2-like [Saccoglossus kowalevskii] Length = 301 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 109/332 (32%), Gaps = 71/332 (21%) Query: 27 DDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 + L R L ++S D LG+++ P+ IS + LA + Sbjct: 2 NAIRLKPRVLRDVSTR--DLKTTILGREIDIPICISPTAF----------QRLAHPDAEA 49 Query: 87 KVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + A G+ M + S E YA V N +A G Sbjct: 50 GTSRASGTFNTCMILSSGSSLSLEDICYAHSGGTKWMDIYVWPNPRVTKDMVQRA-EQAG 108 Query: 146 ADGLFLHLNPLQ-------EIIQPNGNT-----------------------------NFA 169 G+ + ++ Q + N + + Sbjct: 109 CKGIVVSVDICQVGFRRRMAYVAGNNVPRNSINANFDKYCKNGIMNEATYVDEVKCGDPS 168 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I + S +P++LK + ++ D + ++ + ++ GG + + D Sbjct: 169 ATWADIDWIKSITKLPIILKGI---MTVEDALIAVEHKVDAIMVSNHGGRQLDGVPATID 225 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++I R ++ + GG+R G D+LK++ LGA + P Sbjct: 226 VLAEIS-----------------RAVGDKIEVYMDGGVRTGTDVLKALALGARAVFIGRP 268 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + A + V ++ L+ E ++M L G Sbjct: 269 VIYGLAYKGEEGVKNVLQILKDELSLAMALSG 300 >gi|331665233|ref|ZP_08366134.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA143] gi|331675090|ref|ZP_08375847.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA280] gi|331057743|gb|EGI29729.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA143] gi|331067999|gb|EGI39397.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA280] Length = 396 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|241204437|ref|YP_002975533.1| L-lactate dehydrogenase (cytochrome) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858327|gb|ACS55994.1| L-lactate dehydrogenase (cytochrome) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 395 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 117/364 (32%), Gaps = 75/364 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L + GK + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFRPRVL--RDVSKRSTETSLFGKTHAAPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFSDHNAI---KSFELR-QYAPHTV--LISNLGAVQL 128 + LA A+++ + M + GS + + A+ F+ P + LI +GA L Sbjct: 104 DIVLAQGADQSGIPMIISGSSLIPLEEIAAVSPQAWFQAYLPGEPDRIDALIDRVGAAGL 163 Query: 129 N-YDFGVQKAHQAVHVLGADG------------------------------LFLHLNPLQ 157 V A + H P Sbjct: 164 RTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIVRHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F + + + + L++K + + D L + Sbjct: 224 ENSYATRGAPIISSNVTRDFGRRDHLNWNHLERIRNRWSGKLVVKGI---MHPDDAALAV 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAS-----------------RVGDSVAVMVD 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG + Sbjct: 324 GGFRRGTDIMKALALGACFVFVGRPFLYAAAVAGLPGVLKAADILKTELHSNMALLGVTK 383 Query: 324 VQEL 327 V ++ Sbjct: 384 VGDI 387 >gi|16131476|ref|NP_418062.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. MG1655] gi|89110406|ref|AP_004186.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. W3110] gi|157163089|ref|YP_001460407.1| L-lactate dehydrogenase [Escherichia coli HS] gi|170018162|ref|YP_001723116.1| L-lactate dehydrogenase [Escherichia coli ATCC 8739] gi|170083113|ref|YP_001732433.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. DH10B] gi|187734173|ref|YP_001882303.1| L-lactate dehydrogenase [Shigella boydii CDC 3083-94] gi|194435851|ref|ZP_03067954.1| L-lactate dehydrogenase [Escherichia coli 101-1] gi|218707240|ref|YP_002414759.1| L-lactate dehydrogenase [Escherichia coli UMN026] gi|238902696|ref|YP_002928492.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BW2952] gi|253771552|ref|YP_003034383.1| L-lactate dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038805|ref|ZP_04872857.1| L-lactate dehydrogenase [Escherichia sp. 1_1_43] gi|254163535|ref|YP_003046643.1| L-lactate dehydrogenase [Escherichia coli B str. REL606] gi|256025664|ref|ZP_05439529.1| L-lactate dehydrogenase [Escherichia sp. 4_1_40B] gi|293407229|ref|ZP_06651153.1| lldD [Escherichia coli FVEC1412] gi|293463932|ref|ZP_06664346.1| L-lactate dehydrogenase [Escherichia coli B088] gi|297521687|ref|ZP_06940073.1| L-lactate dehydrogenase [Escherichia coli OP50] gi|298382976|ref|ZP_06992571.1| L-lactate dehydrogenase [Escherichia coli FVEC1302] gi|300822378|ref|ZP_07102518.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|300898752|ref|ZP_07117060.1| L-lactate dehydrogenase [Escherichia coli MS 198-1] gi|300927963|ref|ZP_07143521.1| L-lactate dehydrogenase [Escherichia coli MS 187-1] gi|300948063|ref|ZP_07162201.1| L-lactate dehydrogenase [Escherichia coli MS 116-1] gi|300954501|ref|ZP_07166950.1| L-lactate dehydrogenase [Escherichia coli MS 175-1] gi|301028363|ref|ZP_07191611.1| L-lactate dehydrogenase [Escherichia coli MS 196-1] gi|301644270|ref|ZP_07244274.1| L-lactate dehydrogenase [Escherichia coli MS 146-1] gi|307140304|ref|ZP_07499660.1| L-lactate dehydrogenase [Escherichia coli H736] gi|312972109|ref|ZP_07786283.1| L-lactate dehydrogenase [Escherichia coli 1827-70] gi|331644324|ref|ZP_08345453.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H736] gi|331655238|ref|ZP_08356237.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M718] gi|331670449|ref|ZP_08371288.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA271] gi|331679699|ref|ZP_08380369.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H591] gi|462488|sp|P33232|LLDD_ECOLI RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990701|sp|A8A670|LLDD_ECOHS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491774|sp|B2U5C2|LLDD_SHIB3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494977|sp|C4ZXJ7|LLDD_ECOBW RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494978|sp|B1X8M0|LLDD_ECODH RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494979|sp|B1IZI5|LLDD_ECOLC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494980|sp|B7NER0|LLDD_ECOLU RecName: Full=L-lactate dehydrogenase [cytochrome] gi|404695|gb|AAA03585.1| L-lactate dehydrogenase [Escherichia coli] gi|1790033|gb|AAC76629.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. MG1655] gi|85676437|dbj|BAE77687.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K12 substr. W3110] gi|157068769|gb|ABV08024.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli HS] gi|169753090|gb|ACA75789.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli ATCC 8739] gi|169890948|gb|ACB04655.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli str. K-12 substr. DH10B] gi|187431165|gb|ACD10439.1| L-lactate dehydrogenase (cytochrome) [Shigella boydii CDC 3083-94] gi|194425394|gb|EDX41378.1| L-lactate dehydrogenase [Escherichia coli 101-1] gi|218434337|emb|CAR15261.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli UMN026] gi|226838770|gb|EEH70797.1| L-lactate dehydrogenase [Escherichia sp. 1_1_43] gi|238861672|gb|ACR63670.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BW2952] gi|242379129|emb|CAQ33931.1| L-lactate dehydrogenase [Escherichia coli BL21(DE3)] gi|253322596|gb|ACT27198.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975436|gb|ACT41107.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli B str. REL606] gi|253979592|gb|ACT45262.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli BL21(DE3)] gi|260447376|gb|ACX37798.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Escherichia coli DH1] gi|284923641|emb|CBG36738.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli 042] gi|291321564|gb|EFE61000.1| L-lactate dehydrogenase [Escherichia coli B088] gi|291426040|gb|EFE99074.1| lldD [Escherichia coli FVEC1412] gi|298276812|gb|EFI18330.1| L-lactate dehydrogenase [Escherichia coli FVEC1302] gi|299878587|gb|EFI86798.1| L-lactate dehydrogenase [Escherichia coli MS 196-1] gi|300318534|gb|EFJ68318.1| L-lactate dehydrogenase [Escherichia coli MS 175-1] gi|300357605|gb|EFJ73475.1| L-lactate dehydrogenase [Escherichia coli MS 198-1] gi|300452381|gb|EFK16001.1| L-lactate dehydrogenase [Escherichia coli MS 116-1] gi|300463998|gb|EFK27491.1| L-lactate dehydrogenase [Escherichia coli MS 187-1] gi|300525025|gb|EFK46094.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|301077393|gb|EFK92199.1| L-lactate dehydrogenase [Escherichia coli MS 146-1] gi|309704009|emb|CBJ03355.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli ETEC H10407] gi|310334486|gb|EFQ00691.1| L-lactate dehydrogenase [Escherichia coli 1827-70] gi|315138187|dbj|BAJ45346.1| lldD [Escherichia coli DH1] gi|315618691|gb|EFU99277.1| L-lactate dehydrogenase [Escherichia coli 3431] gi|320201365|gb|EFW75946.1| L-lactate dehydrogenase [Escherichia coli EC4100B] gi|323934849|gb|EGB31231.1| FMN-dependent dehydrogenase [Escherichia coli E1520] gi|323939633|gb|EGB35839.1| FMN-dependent dehydrogenase [Escherichia coli E482] gi|323959856|gb|EGB55504.1| FMN-dependent dehydrogenase [Escherichia coli H489] gi|323971250|gb|EGB66495.1| FMN-dependent dehydrogenase [Escherichia coli TA007] gi|331036618|gb|EGI08844.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H736] gi|331047253|gb|EGI19331.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M718] gi|331062511|gb|EGI34431.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA271] gi|331072871|gb|EGI44196.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H591] gi|332345576|gb|AEE58910.1| L-lactate dehydrogenase [Escherichia coli UMNK88] Length = 396 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|116251827|ref|YP_767665.1| L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115256475|emb|CAK07559.1| putative L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 395 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 116/364 (31%), Gaps = 75/364 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L + GK + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFQPRVL--RDVSKRSTETSLFGKTHAAPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFSDHNAI---KSFELR-QYAPHTV--LISNLGAVQL 128 + LA A+++ + M + GS + + A+ F+ P + LI +GA L Sbjct: 104 DIVLAQGADQSGIPMIISGSSLIPLEEIAAVSPQAWFQAYLPGEPDRIDALIDRVGAAGL 163 Query: 129 N-YDFGVQKAHQAVHVLGADG------------------------------LFLHLNPLQ 157 V A + H P Sbjct: 164 RTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIARHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F + + + + L++K + + D + Sbjct: 224 ENSYATRGAPIISSNVTRDFGRRDHLNWNHLERIRNRWSGKLVVKGI---MHPDDAARAV 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAS-----------------RVGDSVAVMVD 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG + Sbjct: 324 GGFRRGTDIMKALALGARFVFVGRPFLYAAAVAGLPGVLKAADILKTELHSNMALLGVTK 383 Query: 324 VQEL 327 V ++ Sbjct: 384 VGDI 387 >gi|156544032|ref|XP_001604479.1| PREDICTED: similar to (s)-2-hydroxy-acid oxidase [Nasonia vitripennis] Length = 366 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 126/352 (35%), Gaps = 54/352 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 + + N++ F + R L + D S LG+KLS PL +S +M + Sbjct: 30 AGDENTLKWNREAFKKIRIRPRVL--RDVSKRDISTTVLGEKLSMPLGVSPTAMQRMAHP 87 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV---MFSDHNAIKSFELRQYAPHTVLI------- 120 E N A AA+ + + + + + A+K F+L Y V + Sbjct: 88 DGECANVKAAQAAKTVFILSTISTSSIEEVAEAAPEAVKWFQLYVYFDRNVTLNLIRRAE 147 Query: 121 -SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--EIIQPNGNT----------- 166 + A+ L D + + + L HL + N+ Sbjct: 148 KAGFKALVLTVDTPM-FGDRRRDIRNKFALPKHLRFANFDGYLARKINSSSEGSGLSEYV 206 Query: 167 ----NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + + + L S +P++LK V L++ D ELG+K G ++ G Sbjct: 207 TNLFDDSLTWNVVTWLKSVTKLPIVLKGV---LTAEDAELGVKYGASAIMVSNHGARQID 263 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + +I R N+ + GG+ G D+ K++ LGA Sbjct: 264 GTPASIEALPEI-----------------VRAVGNKVEVFMDGGITQGTDVFKALALGAK 306 Query: 283 LGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P L + + +E +R+E + L G K V+++ + + Sbjct: 307 MVFFGRPLLWGLTCGGEQGARSVLEMMRREIDQAFALAGCKSVEQVTKDMVV 358 >gi|75674899|ref|YP_317320.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrobacter winogradskyi Nb-255] gi|74419769|gb|ABA03968.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 369 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 126/361 (34%), Gaps = 74/361 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F HL R L ++S + E G +L P+L++ + + + Sbjct: 41 AADEVTARENRAAFARLHLRTRVLRDLSSGN--TACELFGTRLRAPILLAPVA---YQKL 95 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA A ++AM V +Q + + A ++ T L L +Q + Sbjct: 96 AYPDGELATVLGASAMRMAMVVSTQASVALEEIAREA--------QTPLWFQL-YIQHDR 146 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNF-----------ADL------- 171 DF ++ +A G L + ++ P+ + F L Sbjct: 147 DFTLRLVRRA-ESAGIRALVVSVDAPISGLRNREQRMGFAFPGGIEPVNLRGLTPSPRAA 205 Query: 172 ---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 I L A +PL+LK + +++ D E L +G+ ++ Sbjct: 206 GETLFDSPLITRAATWRDIENLREATKLPLVLKGI---MTAEDAEQALAAGVDGLIVSNH 262 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + ++ +I + GG+R G D+ K+ Sbjct: 263 GGRVLDGQPATIEVLPEIAA-----------------AVSGRVPILLDGGIRRGGDVFKA 305 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGAS + F+ + VA + L E +M L G + ++ + + A IR Sbjct: 306 LALGASAVLVGRAFVHGLAAAGAVGVAHVLRILHAELEATMVLTGCRDIRAI--SPASIR 363 Query: 336 H 336 Sbjct: 364 Q 364 >gi|225555486|gb|EEH03778.1| L-lactate ferricytochrome c oxidoreductase [Ajellomyces capsulatus G186AR] Length = 495 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 122/359 (33%), Gaps = 70/359 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMIERINRNL 79 N + L R I + D S LG KL P+ + ++M + E + Sbjct: 145 NNTVYRSILLRPRVF--IDCTKCDLSTNVLGHKLGLPIYVCPAAMARLAHPAGE---AGI 199 Query: 80 AIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----L 123 A A K A + V + + + ++L R+ + + N + Sbjct: 200 AAACSKFGAMQLISNNASMTPEEIVQNATDDQVFGWQLYVQTERKKSEAMLARINKLKSI 259 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL----------------QEIIQPNGNTN 167 V L D V + A ++ L Q++ G + Sbjct: 260 KFVCLTLDAPVPGKREHDERTRALAQTTSVSSLLKASGGTAIGGGAGIGQQLF--AGTDS 317 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++ + L+ ++P++LK + + I ++ ++ GG Sbjct: 318 SLTWTTTLPWLAQHTNLPIVLKGLQTHEDAY-IASLHAPQVKAIILSNHGGREMDTA--- 373 Query: 228 RDLESDIGIVFQDWGIPTPL-SLEMARPYCNEA----QFIASGGLRNGVDILKSIILGAS 282 PT + ++ R +C E + GG+R G D++K++ LGA Sbjct: 374 ----------------PTAVHTMMEIRKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGAR 417 Query: 283 LGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ P + V +E L E +M LLG ++V +L ++N + Q Sbjct: 418 CVGVGRAPLFGLGAGGVEGVERVLEILSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 476 >gi|300907649|ref|ZP_07125277.1| L-lactate dehydrogenase [Escherichia coli MS 84-1] gi|300919826|ref|ZP_07136300.1| L-lactate dehydrogenase [Escherichia coli MS 115-1] gi|301303841|ref|ZP_07209960.1| L-lactate dehydrogenase [Escherichia coli MS 124-1] gi|300400585|gb|EFJ84123.1| L-lactate dehydrogenase [Escherichia coli MS 84-1] gi|300413126|gb|EFJ96436.1| L-lactate dehydrogenase [Escherichia coli MS 115-1] gi|300840804|gb|EFK68564.1| L-lactate dehydrogenase [Escherichia coli MS 124-1] gi|315253994|gb|EFU33962.1| L-lactate dehydrogenase [Escherichia coli MS 85-1] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|293413042|ref|ZP_06655710.1| lldD [Escherichia coli B354] gi|301018937|ref|ZP_07183160.1| L-lactate dehydrogenase [Escherichia coli MS 69-1] gi|291468689|gb|EFF11182.1| lldD [Escherichia coli B354] gi|300399431|gb|EFJ82969.1| L-lactate dehydrogenase [Escherichia coli MS 69-1] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|302754346|ref|XP_002960597.1| hypothetical protein SELMODRAFT_266585 [Selaginella moellendorffii] gi|302771644|ref|XP_002969240.1| hypothetical protein SELMODRAFT_270767 [Selaginella moellendorffii] gi|300162716|gb|EFJ29328.1| hypothetical protein SELMODRAFT_270767 [Selaginella moellendorffii] gi|300171536|gb|EFJ38136.1| hypothetical protein SELMODRAFT_266585 [Selaginella moellendorffii] Length = 371 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 122/355 (34%), Gaps = 64/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F+ R L + VD + LG K+S P++++ + + Sbjct: 33 AEDQWTLKENRTAFERIRFRPRIL--VDVTNVDMTTTVLGFKISMPIMVAPTA---FQRM 87 Query: 73 ERINRNLAIAAE---KTKVA----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLI----- 120 LA A + A S + S I+ F+L Y V+ Sbjct: 88 AHPEGELATARAVSSHGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRR 147 Query: 121 ---SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------NPLQE-----I 159 + A+ L D + + + L HL + Q+ Sbjct: 148 AEKAGFKAIALTVDTP-RLGRRESDIKNRFVLPGHLTLKNFDGLDLGKMDKSQDSGLATY 206 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + + L + +P+L+K V +++ D + +++G ++ G Sbjct: 207 VAGQIDRSLSW--KDVKWLKTITSLPILVKGV---ITAEDAHIAVEAGAAGIIVSNHGAR 261 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSII 278 + + T +LE + GG+R G D LK++ Sbjct: 262 QLDYVPA------------------TISALEEVVQAAAGRVPVFLDGGVRRGTDALKALA 303 Query: 279 LGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 LGA+ + P + A+ V ++ LR EF ++M L G +V E+ + Sbjct: 304 LGAAGVFIGRPVVFSLAVHGETGVRKVLQMLRDEFEIAMALAGCTKVSEINRSHV 358 >gi|466743|gb|AAB18582.1| lctD [Escherichia coli str. K-12 substr. MG1655] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPXIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|315297042|gb|EFU56322.1| L-lactate dehydrogenase [Escherichia coli MS 16-3] gi|323189352|gb|EFZ74634.1| L-lactate dehydrogenase [Escherichia coli RN587/1] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|26250249|ref|NP_756289.1| L-lactate dehydrogenase [Escherichia coli CFT073] gi|110643849|ref|YP_671579.1| L-lactate dehydrogenase [Escherichia coli 536] gi|191170351|ref|ZP_03031904.1| L-lactate dehydrogenase [Escherichia coli F11] gi|194431001|ref|ZP_03063294.1| L-lactate dehydrogenase [Shigella dysenteriae 1012] gi|218702374|ref|YP_002410003.1| L-lactate dehydrogenase [Escherichia coli IAI39] gi|227883775|ref|ZP_04001580.1| L-lactate dehydrogenase [Escherichia coli 83972] gi|293417070|ref|ZP_06659697.1| lldD [Escherichia coli B185] gi|300983586|ref|ZP_07176678.1| L-lactate dehydrogenase [Escherichia coli MS 200-1] gi|300984992|ref|ZP_07177244.1| L-lactate dehydrogenase [Escherichia coli MS 45-1] gi|301047397|ref|ZP_07194477.1| L-lactate dehydrogenase [Escherichia coli MS 185-1] gi|331649423|ref|ZP_08350509.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M605] gi|331659928|ref|ZP_08360866.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA206] gi|81846542|sp|Q8FCB1|LLDD_ECOL6 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|122957897|sp|Q0TBK1|LLDD_ECOL5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494974|sp|B7NPB4|LLDD_ECO7I RecName: Full=L-lactate dehydrogenase [cytochrome] gi|26110678|gb|AAN82863.1|AE016768_281 L-lactate dehydrogenase [Escherichia coli CFT073] gi|110345441|gb|ABG71678.1| L-lactate dehydrogenase [Escherichia coli 536] gi|190909159|gb|EDV68745.1| L-lactate dehydrogenase [Escherichia coli F11] gi|194420456|gb|EDX36532.1| L-lactate dehydrogenase [Shigella dysenteriae 1012] gi|218372360|emb|CAR20234.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli IAI39] gi|222035316|emb|CAP78061.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli LF82] gi|227839053|gb|EEJ49519.1| L-lactate dehydrogenase [Escherichia coli 83972] gi|281180651|dbj|BAI56981.1| L-lactate dehydrogenase [Escherichia coli SE15] gi|291431101|gb|EFF04094.1| lldD [Escherichia coli B185] gi|300300671|gb|EFJ57056.1| L-lactate dehydrogenase [Escherichia coli MS 185-1] gi|300306910|gb|EFJ61430.1| L-lactate dehydrogenase [Escherichia coli MS 200-1] gi|300408272|gb|EFJ91810.1| L-lactate dehydrogenase [Escherichia coli MS 45-1] gi|307555707|gb|ADN48482.1| L-lactate dehydrogenase [Escherichia coli ABU 83972] gi|312948169|gb|ADR28996.1| L-lactate dehydrogenase [Escherichia coli O83:H1 str. NRG 857C] gi|315292983|gb|EFU52335.1| L-lactate dehydrogenase [Escherichia coli MS 153-1] gi|320179946|gb|EFW54888.1| L-lactate dehydrogenase [Shigella boydii ATCC 9905] gi|320193885|gb|EFW68518.1| L-lactate dehydrogenase [Escherichia coli WV_060327] gi|323965872|gb|EGB61320.1| FMN-dependent dehydrogenase [Escherichia coli M863] gi|323975172|gb|EGB70277.1| FMN-dependent dehydrogenase [Escherichia coli TW10509] gi|324008113|gb|EGB77332.1| L-lactate dehydrogenase [Escherichia coli MS 57-2] gi|324012632|gb|EGB81851.1| L-lactate dehydrogenase [Escherichia coli MS 60-1] gi|327250730|gb|EGE62432.1| L-lactate dehydrogenase [Escherichia coli STEC_7v] gi|330909672|gb|EGH38186.1| L-lactate dehydrogenase [Escherichia coli AA86] gi|331041921|gb|EGI14065.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli M605] gi|331053143|gb|EGI25176.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli TA206] gi|332084451|gb|EGI89646.1| L-lactate dehydrogenase [Shigella dysenteriae 155-74] gi|332084787|gb|EGI89970.1| L-lactate dehydrogenase [Shigella boydii 5216-82] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|331685270|ref|ZP_08385856.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H299] gi|331077641|gb|EGI48853.1| L-lactate dehydrogenase [cytochrome] [Escherichia coli H299] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|118472035|ref|YP_888251.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] gi|125886|sp|P21795|LA2M_MYCSM RecName: Full=Lactate 2-monooxygenase; AltName: Full=Lactate oxidase gi|623159|gb|AAA60429.1| L-lactate 2-monooxygenase [Mycobacterium smegmatis] gi|118173322|gb|ABK74218.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] Length = 394 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 74/364 (20%), Positives = 125/364 (34%), Gaps = 75/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI-- 72 + N + F W L+ R L ++ E D SVE GK + P+ + + G + Sbjct: 52 DEHTQRANVEAFKHWGLMPRML--MAATERDLSVELWGKTWAAPMFFAPI--GVIALCAQ 107 Query: 73 -ERINRNLAIAAEKTKVA-----MAVGS---------------QRVMFSDHNAIKSFELR 111 + A A+ +T V +AV S Q D + +SF R Sbjct: 108 DGHGDAASAQASARTGVPYITSTLAVSSLEDIRKHAGDTPAYFQLYYPEDRDLAESFIRR 167 Query: 112 QYA------------------PHTVLISN------LGAVQLNYDFGVQKAHQAVHVLGAD 147 P + ISN L D QK +A + A+ Sbjct: 168 AEEAGYDGLVITLDTWIFGWRPRDLTISNFPFLRGLCLTNYVTDPVFQKKFKAHSGVEAE 227 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 GL NP +G + I + S +P++LK + D + SG Sbjct: 228 GL--RDNPRLAADFWHGLFGHSVTWEDIDWVRSITKMPVILKGIQH---PDDARRAVDSG 282 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + + GG + G+P L + + G+ Sbjct: 283 VDGIYCSNHGGRQ------------------ANGGLPALDCLPEVVKASGDTPVLFDSGI 324 Query: 268 RNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D++K++ +GAS G+ P+ A+ S + SL E + M + G + ++E Sbjct: 325 RTGADVVKALAMGASAVGIGRPYAWGAALGGSKGIEHVARSLLAEADLIMAVDGYRNLKE 384 Query: 327 LYLN 330 L ++ Sbjct: 385 LTID 388 >gi|291616478|ref|YP_003519220.1| LldD [Pantoea ananatis LMG 20103] gi|291151508|gb|ADD76092.1| LldD [Pantoea ananatis LMG 20103] gi|327392914|dbj|BAK10336.1| L-lactate dehydrogenase LldD [Pantoea ananatis AJ13355] Length = 390 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + E+ + LS P+ ++ + G Sbjct: 29 AYAEHTLQRNVADLSEVALRQRIL--RNMSELSLETTLFNETLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA + + + V + A + F+L + A++ Sbjct: 86 RRGEVQAARAAAGKGIPFTLSTVSVCPIEEVAPQINRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNPL-----QEIIQPN------------ 163 G V + A N Q I P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGENAALRRYWQAITHPKWALDVGLQGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ +K + + D P+++K + L D Sbjct: 203 DLGNISTYLGKPTGLEDYIGWLAKNFDPSISWQDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L F+ A V + + KE V+M L Sbjct: 302 TILADSGIRNGLDVVRMIALGADSVLLGRAFIYALATQGQRGVEHLLTLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G KR+ ++ + + Sbjct: 362 TGAKRIADITQASLV 376 >gi|82779098|ref|YP_405447.1| L-lactate dehydrogenase [Shigella dysenteriae Sd197] gi|309784415|ref|ZP_07679054.1| L-lactate dehydrogenase [Shigella dysenteriae 1617] gi|85540708|sp|Q329P9|LLDD_SHIDS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81243246|gb|ABB63956.1| L-lactate dehydrogenase [Shigella dysenteriae Sd197] gi|308927922|gb|EFP73390.1| L-lactate dehydrogenase [Shigella dysenteriae 1617] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSINEITQDSLV 376 >gi|67541783|ref|XP_664659.1| hypothetical protein AN7055.2 [Aspergillus nidulans FGSC A4] gi|40742511|gb|EAA61701.1| hypothetical protein AN7055.2 [Aspergillus nidulans FGSC A4] gi|259483629|tpe|CBF79176.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 387 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 109/328 (33%), Gaps = 45/328 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNK 70 + N + + + R + +I+ E LG S P IS + G + Sbjct: 74 AAGEWSYRNNLEVYGRFRFRPRVMVDITQIEKTLPTTILGHNFSAPFYISPCASAGLAHP 133 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E N AA + + + + + + A + Q Y Sbjct: 134 DAE---ANFVKAAYEENI----------LYIPALLATLSMDEIAAAKPEDGSQVLFQQAY 180 Query: 131 ----DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK---------IAL 177 D Q+ LGA + ++ + + N S A Sbjct: 181 LNSNDTATQQVFDDAERLGAKAIVWTIDSPADGNRHRANRYGVGSSDSDYTLSTWEFYAK 240 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L + +P++LK + D++L +K G+ ++ GG S ++ ++ Sbjct: 241 LQNMTTLPIVLKGIQH---VEDVKLAIKHGVPAIILSNHGGRQLDSSPSSLEVALEVYQE 297 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 D N+ + A GG+R G D+LK + LG GL F+ Sbjct: 298 DPD--------------LFNQIEIYADGGIRYGADVLKLLSLGVKAVGLGRSFMYANAYG 343 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 ++ V AI+ L+ E + LG ++ Sbjct: 344 AEGVRHAIQLLKHEIAIDAANLGVPDLK 371 >gi|145629157|ref|ZP_01784956.1| L-lactate dehydrogenase [Haemophilus influenzae 22.1-21] gi|145630716|ref|ZP_01786495.1| L-lactate dehydrogenase [Haemophilus influenzae R3021] gi|145639717|ref|ZP_01795320.1| L-lactate dehydrogenase [Haemophilus influenzae PittII] gi|148825724|ref|YP_001290477.1| L-lactate dehydrogenase [Haemophilus influenzae PittEE] gi|229846913|ref|ZP_04467019.1| L-lactate dehydrogenase [Haemophilus influenzae 7P49H1] gi|260582091|ref|ZP_05849886.1| L-lactate oxidase [Haemophilus influenzae NT127] gi|319776732|ref|YP_004139220.1| L-lactate dehydrogenase [Haemophilus influenzae F3047] gi|319898187|ref|YP_004136384.1| l-lactate dehydrogenase [Haemophilus influenzae F3031] gi|329123157|ref|ZP_08251727.1| L-lactate dehydrogenase [Haemophilus aegyptius ATCC 11116] gi|166990704|sp|A5UBE3|LLDD_HAEIE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|144978660|gb|EDJ88383.1| L-lactate dehydrogenase [Haemophilus influenzae 22.1-21] gi|144983842|gb|EDJ91292.1| L-lactate dehydrogenase [Haemophilus influenzae R3021] gi|145271274|gb|EDK11188.1| L-lactate dehydrogenase [Haemophilus influenzae PittII] gi|148715884|gb|ABQ98094.1| L-lactate dehydrogenase [Haemophilus influenzae PittEE] gi|229809997|gb|EEP45717.1| L-lactate dehydrogenase [Haemophilus influenzae 7P49H1] gi|260094981|gb|EEW78874.1| L-lactate oxidase [Haemophilus influenzae NT127] gi|301170493|emb|CBW30100.1| L-lactate dehydrogenase, FMN-linked [Haemophilus influenzae 10810] gi|309750686|gb|ADO80670.1| L-lactate dehydrogenase, FMN-linked [Haemophilus influenzae R2866] gi|317433693|emb|CBY82081.1| L-lactate dehydrogenase [Haemophilus influenzae F3031] gi|317451323|emb|CBY87561.1| L-lactate dehydrogenase [Haemophilus influenzae F3047] gi|327471712|gb|EGF17154.1| L-lactate dehydrogenase [Haemophilus aegyptius ATCC 11116] Length = 381 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 ADIK 371 >gi|193066082|ref|ZP_03047138.1| L-lactate dehydrogenase [Escherichia coli E22] gi|194427441|ref|ZP_03059990.1| L-lactate dehydrogenase [Escherichia coli B171] gi|260846627|ref|YP_003224405.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O103:H2 str. 12009] gi|192926244|gb|EDV80882.1| L-lactate dehydrogenase [Escherichia coli E22] gi|194414481|gb|EDX30754.1| L-lactate dehydrogenase [Escherichia coli B171] gi|257761774|dbj|BAI33271.1| L-lactate dehydrogenase LldD, FMN-linked [Escherichia coli O103:H2 str. 12009] gi|323160716|gb|EFZ46653.1| L-lactate dehydrogenase [Escherichia coli E128010] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSINEITQDSLV 376 >gi|117625883|ref|YP_859206.1| L-lactate dehydrogenase [Escherichia coli APEC O1] gi|166990702|sp|A1AHE2|LLDD_ECOK1 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|115515007|gb|ABJ03082.1| L-lactate dehydrogenase, FMN-linked [Escherichia coli APEC O1] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSACALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|81429009|ref|YP_396009.1| L-lactate oxidase [Lactobacillus sakei subsp. sakei 23K] gi|78610651|emb|CAI55702.1| L-Lactate oxidase [Lactobacillus sakei subsp. sakei 23K] Length = 368 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 122/350 (34%), Gaps = 61/350 (17%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 I+ N F+ H+ R L +I + D S E G L+ P++++ + ++ Sbjct: 47 YTINENITAFNHKHIAPRVLQDI--ENPDTSTEIFGDHLTSPIIMAPVA------AHKLV 98 Query: 77 RNLAIAAEKTKVAM------AVGSQRVMFSD-----HNAIKSFEL---------RQYAPH 116 AA VA D + F+L R+ Sbjct: 99 NTQGEAATAKGVAEYGSILTMSSFASASIDDMATAADGGPQWFQLYMSKDNDINRKILDE 158 Query: 117 TVLISNLGAVQLNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + N+ A+ L D G ++ + H GL + + Q + + + Sbjct: 159 AM-AHNVKAIVLTADATVGGNRETDKRNHFTFPVGLPI-VEAYQTGVGQTMDAVYKSAKQ 216 Query: 174 KIA-----LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ +S +P+ +K V ++ D+E+ L++G + ++ GG + Sbjct: 217 RLNPKDVEFISEYTHLPVFVKGVQ---TAEDVEIALQAGAKGIWVSNHGGRQLDGGPAA- 272 Query: 229 DLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 SL +A+ + G+R G + K++ GA + + Sbjct: 273 -----------------FDSLHVVAKAVNKRVPIVFDSGVRRGQHVFKALSEGADIVAIG 315 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P + A+ S V E L+KE + M L GT + E+ + H Sbjct: 316 RPVIYGLALGGSIGVKNVFEYLQKELELVMQLAGTHNIDEVKATQLIDNH 365 >gi|188495740|ref|ZP_03003010.1| L-lactate dehydrogenase [Escherichia coli 53638] gi|188490939|gb|EDU66042.1| L-lactate dehydrogenase [Escherichia coli 53638] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 VILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|320584017|gb|EFW98229.1| Cytochrome b2 [Pichia angusta DL-1] Length = 509 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + +P+L+K V D+ + G ++ GG +L Sbjct: 328 WDDVKKIKQSTKLPVLIKGVQR---LEDVVQAVDDGFDGVVLSNHGGRQLDTAPPPVELL 384 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----LGGLA 287 +++ L+ + + GG+R G DILK++ LG GL Sbjct: 385 AEVVPE-----------LKRRNKLRPDFEIFIDGGVRRGTDILKALALGGQNVRVGVGLG 433 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 PFL + + V AI+ L+ E + M LLG + ++EL Sbjct: 434 RPFLYANSSYGENGVRKAIQLLKDELEMDMRLLGVRNLREL 474 >gi|330914715|ref|XP_003296754.1| hypothetical protein PTT_06934 [Pyrenophora teres f. teres 0-1] gi|311330963|gb|EFQ95149.1| hypothetical protein PTT_06934 [Pyrenophora teres f. teres 0-1] Length = 388 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 108/325 (33%), Gaps = 40/325 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEI-SFDEVDPSVEFLGKKLSFPLLISSMT-GGNNK 70 + N + F + + R L ++ + LG S P+ IS GG Sbjct: 71 AAGEWSYRNNLEIFQRYRIRPRFLTDVTNVPN-TMPTTILGHNFSAPIFISPCARGGYAN 129 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVM-FSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + LA A + + D A ++ + + L NL + Sbjct: 130 DAGEVG--LAKGAGDAGILYMPSLYSSIPMEDIYAARASKDQVLFQQIYLTGNLSDTKAL 187 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------LSSKIALLSS 180 +D LGA GL L ++ I+ L + Sbjct: 188 FDQ--------AKSLGAKGLVLTVDSAGSAIRHRAARYGVGSANTKLTKLTWDVFHQLQN 239 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 D+PL+ K + + D + +K+G++ ++ GG S + +I Sbjct: 240 MTDLPLIPKGIQ---TVEDAQDAVKNGVKAIFLSNHGGRQIDGAPSTLQVAMEIHQRDP- 295 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + + A GG+R G DILK + LG G+ F+ + ++ Sbjct: 296 -------------SLFKKVEIYADGGIRYGTDILKLLALGVRAVGVGRSFMFANIYGAEG 342 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 V A + L+ E ++ +G ++ Sbjct: 343 VKKAADLLKNELLMDAANMGVADLK 367 >gi|256021388|ref|ZP_05435253.1| L-lactate dehydrogenase [Shigella sp. D9] gi|332282623|ref|ZP_08395036.1| L-lactate dehydrogenase [Shigella sp. D9] gi|332104975|gb|EGJ08321.1| L-lactate dehydrogenase [Shigella sp. D9] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSINEITQDSLV 376 >gi|148975239|ref|ZP_01812163.1| L-lactate dehydrogenase [Vibrionales bacterium SWAT-3] gi|145965163|gb|EDK30413.1| L-lactate dehydrogenase [Vibrionales bacterium SWAT-3] Length = 379 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 123/373 (32%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + L R L +++ E G+KL+ P+ ++ + TG + E Sbjct: 32 EHTLHRNTADLAEIALKQRVL--NDMSDLNLETELFGEKLAMPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNL 123 A AA+ + + + V + A K F+L R + + + + Sbjct: 90 V---QAAKAADNKGIPFTMSTVSVCPIEEVAPKIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAVRRV--FQSMRHPSWAVDVGLLGKPHDL 204 Query: 163 ------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G+ ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGSPTKLEDYIGWLGDNFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPSIADAVKGDTKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G+D+++ + LGA L F+ A V ++ KE V+M L G Sbjct: 304 LVDSGIRTGLDVVRMMALGADCTLLGRSFVYALAAQGQAGVENLLDLYDKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +++L + + Sbjct: 364 AKTIKDLTRESLV 376 >gi|82545972|ref|YP_409919.1| L-lactate dehydrogenase [Shigella boydii Sb227] gi|85540707|sp|Q31V17|LLDD_SHIBS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81247383|gb|ABB68091.1| L-lactate dehydrogenase [Shigella boydii Sb227] gi|320186851|gb|EFW61571.1| L-lactate dehydrogenase [Shigella flexneri CDC 796-83] gi|332089524|gb|EGI94628.1| L-lactate dehydrogenase [Shigella boydii 3594-74] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADTHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|326382359|ref|ZP_08204051.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326199089|gb|EGD56271.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 381 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 117/375 (31%), Gaps = 84/375 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R++ FD LI R L +VD S L +K S PL+ + TG M Sbjct: 39 AGAEESLRRSRAVFDSVELIPRVL--RDVSDVDVSTTILERKQSLPLIFAP-TGFTRMMH 95 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + AA + + A+ + + A AP L + + + Sbjct: 96 HTGESAVVRAASRAGLPYALSTMGTTSIEDLAA-------AAPDARRWFQL-YLWRDREA 147 Query: 133 GVQKAHQAVHVLGADGLFLHLNP------LQEIIQP-------------NGNTNFADLSS 173 A +A G D L L L+ L+++ +G + + Sbjct: 148 SRDFAERA-DANGYDTLILTLDTPVSGRRLRDLRNGMTIPPTLRARTVIDGARHPHWWFN 206 Query: 174 --------------------------------KIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + L++K + + D Sbjct: 207 FLTTEPLEFASLRSWGGTGSSVSNLDPTATIADLEWVRGIWPGRLVVKGIQ---TVDDAR 263 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L + +G I+ GG + + + I + ++ Sbjct: 264 LVVDAGADGIVISNHGGRQLDKAPTPLETLPAI-----------------VDAVGDRSEV 306 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLG 320 G +R+G DI+ ++ LGA + +L M V ++ L E + +M L+G Sbjct: 307 FIDGAVRSGADIIAAVALGARAVLIGRAYLYGLMAGGGAGVDRVLDILGTEMVNTMQLMG 366 Query: 321 TKRVQELYLNTALIR 335 + EL + +R Sbjct: 367 VTSLAELTPDRVRLR 381 >gi|294490199|gb|ADE88955.1| L-lactate dehydrogenase (cytochrome) [Escherichia coli IHE3034] Length = 396 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEMALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|2570515|gb|AAB82143.1| glycolate oxidase [Oryza sativa Indica Group] Length = 369 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 56/349 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D + N++ F R L I ++D S LG K+S P++I+ KM Sbjct: 30 AEDDWTLKENREAFSAILFRPRIL--IDVSKIDMSATVLGFKISMPIMIAPSA--MQKMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------------FELRQYAPHTV 118 A + S S + + ++ Sbjct: 86 HPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGNPFLHLYLCKDRNVVEHLVKKT 145 Query: 119 LISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-NFADL----- 171 + A+ L D + + + +L L + + P + N + L Sbjct: 146 KRAGFKAIALTVDAPRLGRRETDIKNRFVLPPYLTLKKFEGLDLPEMDKSNDSGLASYVA 205 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L S +P+L+K V +++ D +L + SG ++ G Sbjct: 206 GQIDRALTWKDVKWLQSITSLPILVKGV---ITAEDAKLAVHSGAAGIIVSNHGARQLDY 262 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T +LE GG+R G D+ K++ LGA+ Sbjct: 263 VPA------------------TISALEEVVTAAAGRIPVYLDGGVRRGTDVFKALALGAA 304 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A + V + +R+EF ++M G + ++ Sbjct: 305 GVFIGKPVVFALAAEGKAGVRNLLRMMREEFELTMAFSGCTSLADITRA 353 >gi|326912808|ref|XP_003202738.1| PREDICTED: hydroxyacid oxidase 2-like, partial [Meleagris gallopavo] Length = 314 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 100/301 (33%), Gaps = 51/301 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM---IERIN 76 D N + R L ++S +D + LG ++SFP+ I+ TG + E+ Sbjct: 36 DENILAYKRIRFRPRMLRDVSM--LDTRTKILGTEISFPVGIAP-TGFHQLAWPDGEKST 92 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE------------LRQYAPHTVLISNLG 124 A A +A + + A F RQ + G Sbjct: 93 ARAAKAMGTCYIASTYSTCSLEEITAAAPGGFRWFQLYIHRNRAVSRQLVQQAEALGFQG 152 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHL-----------NPLQEIIQPNGNTNFADLSS 173 V L D + + + L H+ N E P + + + Sbjct: 153 LV-LTADLP-YTGKRRIDIRNGFQLPPHMKLKNLEGAFEGNDRSEYGLPPNSLDPSVTWD 210 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L S +P+++K + L+ D EL ++ G++ ++ GG + D Sbjct: 211 DIYWLRSLTHLPIVIKGI---LTKEDAELAVRHGVQGIIVSNHGGRQLDGAPATIDAL-- 265 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +E+ + GG+R G D+LK++ LGA + P L Sbjct: 266 ---------------VEVVEAVRGRVEVYLDGGIRKGSDVLKALALGAKCVFIGRPALWG 310 Query: 294 A 294 Sbjct: 311 L 311 >gi|325959835|ref|YP_004291301.1| (S)-2-hydroxy-acid oxidase [Methanobacterium sp. AL-21] gi|325331267|gb|ADZ10329.1| (S)-2-hydroxy-acid oxidase [Methanobacterium sp. AL-21] Length = 419 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 109/325 (33%), Gaps = 51/325 (15%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N + L R + E + S+ K+++ P++ SS++G + +N Sbjct: 121 KTFEENYNSLQRYKLKMRVIK--DHKEPEMSLSIFNKQIALPVMGSSLSG----VKNSMN 174 Query: 77 RNLAIAAEKTKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 ++ + AM+ G+ ++ + ++ ++ + Sbjct: 175 DSIPEETFYRGLLHGAMSSGTIGMVGNTNDVPDDLGVKTV-----------GENHGWGIP 223 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNG----------NTNFADLSSKIALLSSAMD 183 + K +L LN L + G + + + L + + Sbjct: 224 IFKPQSQERLLELIKQAEELNVLAAGVDLEGAGSTFWKTAKKPVYRKGENDLIELVDSTE 283 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +PL+ K + + D L G ++ GG + ++ +I Sbjct: 284 LPLIFKGI---MCREDAAKLLDVGAAACYVSNHGGRVLDGAQGVAEVLPEISS------- 333 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VV 302 + +A G +R G D+LK + LGA + + P + ++ + V Sbjct: 334 ----------EVDGKIPVLADGAIRTGYDVLKILALGADVALIGRPLARLSLAGGEVPVK 383 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + ++ + +M L G + E+ Sbjct: 384 LYYKYVKDDLRNAMLLTGCDNLNEI 408 >gi|86144911|ref|ZP_01063243.1| L-lactate dehydrogenase [Vibrio sp. MED222] gi|85837810|gb|EAQ55922.1| L-lactate dehydrogenase [Vibrio sp. MED222] Length = 379 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 121/373 (32%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + L R L +++ E G+KL+ P+ ++ + TG + E Sbjct: 32 EHTLRRNTADLAEIALKQRVL--NDMSDLNLETELFGEKLAMPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNL 123 A AA+ + + + V + A K F+L R + + + + Sbjct: 90 V---QAAKAADNKGIPFTMSTVSVCPIEEVAPKIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQPN-------------- 163 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAIRRV--FQSMRHPRWAVDVGLLGKPHDL 204 Query: 164 -----------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGSPTKLEDYIGWLGDNFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPAIADAVKGDTKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G+D+++ + +GA L F+ A V ++ KE V+M L G Sbjct: 304 LVDSGIRTGLDVVRMMAMGADCTLLGRSFVYALAAQGQAGVENLLDLYDKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +++L + + Sbjct: 364 AKTIKDLTRESLV 376 >gi|33592748|ref|NP_880392.1| lactate dehydrogenase [Bordetella pertussis Tohama I] gi|33572396|emb|CAE41956.1| lactate dehydrogenase [Bordetella pertussis Tohama I] gi|332382162|gb|AEE67009.1| lactate dehydrogenase [Bordetella pertussis CS] Length = 398 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 120/362 (33%), Gaps = 76/362 (20%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + RN++ D+ L+ R + ++S S + G+ S P++I+ TG + Sbjct: 43 LSRNRRSLDELRLLPRVMRDVSRRN--CSTHYFGQASSMPMIIAP-TGAAGLLAYEGEYL 99 Query: 79 LAIAAEKTKVAMAVGSQRVMFSD----------------HNAIKSFEL----RQYAPHTV 118 +A AA + + + + ++ + + S+ L R + Sbjct: 100 MAKAAARAGIPFVLSTASIVSMERVAQAGGDLWFQLYMLPDLGASYRLMDRARNAGYRAL 159 Query: 119 LISNLGAVQLNYDFGVQKA---------HQAVHVLGADGLFLHL--------------NP 155 +++ V N ++ V+ A+ V+ ++ N Sbjct: 160 MVTLDTPVSPNREYNVRNHFTLPMQISSRNALDVMRRPAWIWNVFFRYLLRNGVPMLENY 219 Query: 156 LQEIIQ-----PNGNTNFADL----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 E Q G + + L PL+ K + L D + Sbjct: 220 PDEYRQRLDASGKGRMSLPKTDSITWESLRALRRHWRGPLIAKGI---LHPEDARMARDC 276 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG ++ + + I ++A+ G Sbjct: 277 GVDAIVVSNHGGRNFDAAATPIEALPRI-----------------VDEIADKAEVFVDSG 319 Query: 267 LRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R GVD+ K++ LGA L P A + A+E +R+E + SM LG + + Sbjct: 320 FRRGVDVAKALALGARGVLLGRAPLWGVASAGEPGALHALELMREELLRSMAFLGCESLA 379 Query: 326 EL 327 L Sbjct: 380 AL 381 >gi|37525082|ref|NP_928426.1| hypothetical protein plu1106 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784508|emb|CAE13400.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 382 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 114/374 (30%), Gaps = 80/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N++ FD W I L I + D S K S P I+ TG Sbjct: 31 AEDEKGLRYNQQIFDRWRFIPHRL--IDVSKRDISCTLFNKVWSAPFAIAP-TG--LNAT 85 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQ-RVMFSD----HNAIKSFELRQYAPHTVLISNLGA 125 R N +L A A K + + S + D + K F+L P A Sbjct: 86 FRPNGDLILARVAAKENIPFILSSAANMTIEDVARQCDGEKWFQLYVVCPELAEQMVKRA 145 Query: 126 VQLNYDFGVQKAHQAVH---------------------------------------VLGA 146 + +Y V AV+ + Sbjct: 146 LASDYTTLVITVDVAVNGYRERDIRNQFCLPLRYRPAVLLDGCLHPSWLLRFLCNGMPQL 205 Query: 147 DGLFLHLN---PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + N +Q + + S + L + LL+K + + + + Sbjct: 206 ANFVMTENIGVDVQVAVMSRQMDASFNWQS-LEQLRALWPHKLLVKGL---VRPEEAKKC 261 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++ G ++ GG S + S T ++ + Sbjct: 262 IELGADGVILSNHGGRQLDGTLSPMETLSA-----------TVQAMYQ--------PVLI 302 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G R G DI+K++ LGA++ L L A V I L+++ ++ +G+ Sbjct: 303 DSGFRRGSDIVKALALGANMVLLGRAVLYGLAATGEQGVSEVIRLLKEDIERTLVHIGSP 362 Query: 323 RVQELYLNTALIRH 336 ++ L + + Sbjct: 363 SIRGL--TPDFVHN 374 >gi|190348025|gb|EDK40406.2| hypothetical protein PGUG_04504 [Meyerozyma guilliermondii ATCC 6260] Length = 378 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 115/347 (33%), Gaps = 68/347 (19%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + NK +D + L R + +++ + + LG ++FPL IS N + + Sbjct: 41 QTLGENKATYDRYKLRPRVMVDVTSVD--TTTTSLGSTVAFPLGISPSA---NHGMAHPD 95 Query: 77 RNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 L AA K V M + S A +Q + ++ +V ++ + Sbjct: 96 AELGTSRAAAKKGVNMILSSWTNSSPKDVA------KQGENSGIAYAHQLSVVMDEPTNM 149 Query: 135 QKAHQAVHVLGADGLFLHLNP------LQEIIQP-------------------------N 163 A G LF+ ++ L E+ Sbjct: 150 SIIKNA-EECGYKALFISVDCPWLGRRLNEMRNSFTVPSHLKYPCYPWIDSTNMVSDDIR 208 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + I L ++ + LK + L++ D L + +G ++ GG Sbjct: 209 TQYDASLTWDYIRQLKKKTNMQIWLKGI---LTAEDAALAVDAGADGILVSNHGGRQLDG 265 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + T +L E+ GG+R G DI K++ LGA Sbjct: 266 A------------------MSTLEALPEIVEAVKGRIPVHIDGGIRRGSDIFKALALGAD 307 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + L A + V A+ L EF + M L+G K V ++ Sbjct: 308 YCWIGRIALWGLAYNGEKGVSLALNILHDEFRLVMALMGCKSVSDIK 354 >gi|254361207|ref|ZP_04977351.1| L-lactate dehydrogenase [Mannheimia haemolytica PHL213] gi|116687976|gb|ABK15634.1| L-lactate dehydrogenase [Mannheimia haemolytica] gi|153092698|gb|EDN73747.1| L-lactate dehydrogenase [Mannheimia haemolytica PHL213] Length = 381 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 121/370 (32%), Gaps = 75/370 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN +D L R L ++D +E G+KLS P+ ++ + G R Sbjct: 31 AEQTLRRNVSDLEDIALRQRVLK--DMSQLDTGIELFGEKLSMPVTLAPV-GALGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL- 123 A AA+ + + + + + L R + + + + Sbjct: 88 GEVQAAKAADNKGIPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAA 147 Query: 124 --------------GAVQLNYDFGV--------QKAHQAVHVLGADGLFLHLNPL----- 156 GA + G+ + VH A + +H P Sbjct: 148 GCSTLVFTVDMPTPGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNV 207 Query: 157 -QEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + +P N+ + + D P+++K + L D + ++ Sbjct: 208 SNYMGKPIDLNNYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIAS 264 G ++ GG + + + +L +A E + +A Sbjct: 265 FGADGIIVSNHGGRQLDGV------------------LSSAKALPSIADAVKGEIKILAD 306 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+RNG+D+++ + LGA + F+ V ++ KE V+M L + Sbjct: 307 SGIRNGLDVVRMLALGADCTMIGRSFVYALSAAGQAGVENLLDIFLKEMKVAMTLTSNAK 366 Query: 324 VQELYLNTAL 333 + ++ + + Sbjct: 367 ISDIGRDALV 376 >gi|66044163|ref|YP_234004.1| L-lactate dehydrogenase [Pseudomonas syringae pv. syringae B728a] gi|81308523|sp|Q4ZY06|LLDD_PSEU2 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|63254870|gb|AAY35966.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas syringae pv. syringae B728a] Length = 380 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 116/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D V G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRANGSDLADISLRQRVLK--NVDNVSLETRLFGESLAMPIILSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R +A AA ++ + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 L G ++ GG + + T +L + + ++ Sbjct: 261 DALSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIVQAVGSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L D V ++ +E V+M L Sbjct: 303 VLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLT 362 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 363 GVTSIEQI 370 >gi|50083398|ref|YP_044908.1| L-lactate dehydrogenase [Acinetobacter sp. ADP1] gi|81827562|sp|Q6FFS1|LLDD_ACIAD RecName: Full=L-lactate dehydrogenase [cytochrome] gi|49529374|emb|CAG67086.1| L-lactate dehydrogenase, FMN linked [Acinetobacter sp. ADP1] Length = 384 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 113/372 (30%), Gaps = 81/372 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L + + + LS P+ +S + TG + Sbjct: 29 AYAEYTLKRNVEDLSQIALRQRVL--NDMSSLSLETKLFNETLSMPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLI 120 E A+AA+K + + + + + LR + + + Sbjct: 87 RGEV---QAAVAADKKGIPFTMSTVSVCPIEEVTPAIKRPMWFQLYVLRDRGFMKNALER 143 Query: 121 SNL---GAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN----------- 163 + + D V A + G + LQ ++ P Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRY--LQSMMHPQWAWDVGLLGRP 201 Query: 164 --------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G ++ + + D P+++K + L D Sbjct: 202 HDLGNISKYLGKTTGLEDYISWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + ++ G ++ GG + S I + Sbjct: 259 AKDAVRFGADGIVVSNHGGRQLDGVMSSARAMPAIAE-----------------AVKGDL 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 302 TILADSGIRNGLDVVRMLALGADSVMLGRAFIYALAAQGGQGVSNLLDLIDKEMRVAMTL 361 Query: 319 LGTKRVQELYLN 330 G K + ++ + Sbjct: 362 TGAKTIADINES 373 >gi|255946616|ref|XP_002564075.1| Pc22g00300 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591092|emb|CAP97318.1| Pc22g00300 [Penicillium chrysogenum Wisconsin 54-1255] Length = 394 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 122/354 (34%), Gaps = 72/354 (20%) Query: 21 RNKKFFDDWHLI---HRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKMIERIN 76 DDW LI R L S D +D LG FP +S+M T G++ Sbjct: 42 SMTTNLDDWSLINFRPRIL--RSVDSMDTRRNILGHTSQFPFFVSAMGTLGSSHPGAEP- 98 Query: 77 RNLAIAAEKTKVAMAVGSQR---------VMFSDHNAIK-------SFEL-----RQYAP 115 L A + + + + + + SF+L R A Sbjct: 99 -LLVRGATRKGLHTMISTASTKPLEEIMDAHLDEQRLLGNKSPSNLSFQLYVPVDRTRAK 157 Query: 116 HTVLISNLGAVQLNY---------DFGVQKAHQAVHVLGA----DGLFLH----LNPLQE 158 + Q + + QA L A + +H P Sbjct: 158 SLIRRVKTAGYQSLWVTVDTSTLGKRTADRYLQARENLDAGVAENARDIHSENDFAPAFG 217 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 Q G+ + + +SS P++LK + S D++L ++ G++ ++ GG Sbjct: 218 GRQVPGSVDGGLTWEDLDWISSEWGGPMVLKGIQ---SVEDVKLAVQHGVQGILLSNHGG 274 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDIL 274 + ++L R Y E Q GGLR+G D+L Sbjct: 275 RQIHSAP------------------SSLMTLLEIRTYYPEAFDKLQVFVDGGLRDGADVL 316 Query: 275 KSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA+ G+ P + A ++ V + + +E ++M +LG + +L Sbjct: 317 KALCLGATAVGVGRPYYYALAAYGAEGVERCTDIITEELEITMKMLGVSSLDQL 370 >gi|323516161|gb|ADX90542.1| L-lactate dehydrogenase [Acinetobacter baumannii TCDC-AB0715] Length = 383 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYAEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKTISDI-NTDCLVQ 377 >gi|206577634|ref|YP_002236030.1| L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] gi|288933037|ref|YP_003437096.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|290511830|ref|ZP_06551198.1| L-lactate dehydrogenase [Klebsiella sp. 1_1_55] gi|259494985|sp|B5XMV0|LLDD_KLEP3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|206566692|gb|ACI08468.1| L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] gi|288887766|gb|ADC56084.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|289775620|gb|EFD83620.1| L-lactate dehydrogenase [Klebsiella sp. 1_1_55] Length = 394 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 33/191 (17%) Query: 159 IIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + QP G ++ + + + D P+++K + L D ++ G Sbjct: 211 LGQPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDAVRFGA 267 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGL 267 ++ GG + + + +L +A + +A G+ Sbjct: 268 DGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGI 309 Query: 268 RNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 RNG+D+++ I LGA L +L A V + + KE V+M L G K ++E Sbjct: 310 RNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGAKTIRE 369 Query: 327 LYLNTALIRHQ 337 + ++ + + Sbjct: 370 ISRDSLVQNAE 380 >gi|242008344|ref|XP_002424966.1| Hydroxyacid oxidase, putative [Pediculus humanus corporis] gi|212508595|gb|EEB12228.1| Hydroxyacid oxidase, putative [Pediculus humanus corporis] Length = 361 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 115/343 (33%), Gaps = 56/343 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N+ F ++ + R L + D S LG K+S PL IS KM Sbjct: 32 AGEEISLRLNRSSFANYRIRPRFL--RDVSKRDLSATVLGTKVSMPLGISPTA--MQKMA 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFS-------DHNAIKSFEL---RQYAPHTVLI-- 120 + + A + + S S K F+L + LI Sbjct: 88 HHLGEVASAKAAGKAGTIFILSTISTSSIEEVAEGAPETEKWFQLYIYKDRMSTVDLIRR 147 Query: 121 ---SNLGAVQLNYDFGVQKAHQA---------VHVLGADGLFLHLNPLQEIIQPNGNTNF 168 +N A+ L D + A H+ A+ L N + + + +G + Sbjct: 148 AEKNNFKALVLTIDAPIFGIRHADSRNKFKLPPHLKMANFTGLKANSINQAKKGSGLNEY 207 Query: 169 AD-------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + I L S +P++LK + L+S D E+ + GI ++ G Sbjct: 208 VNELFDQSLTWDHIKWLKSVTSLPIILKGI---LTSEDAEMAVSLGISAIFVSNHGARQV 264 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + S + +I + + GG+ G DI ++ LGA Sbjct: 265 DLVPSPIEALPEIS-----------------KVVNGQCDIYIDGGITKGTDIFIALALGA 307 Query: 282 SLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKR 323 + + L D V +E LR E +M L G + Sbjct: 308 KMVFIGRSVLWGLTCDGESGVTNVLEILRNELDNTMCLTGKTK 350 >gi|148994402|ref|ZP_01823625.1| hydroxyethylthiazole kinase [Streptococcus pneumoniae SP9-BS68] gi|168488383|ref|ZP_02712582.1| L-lactate oxidase [Streptococcus pneumoniae SP195] gi|147927238|gb|EDK78272.1| hydroxyethylthiazole kinase [Streptococcus pneumoniae SP9-BS68] gi|183572905|gb|EDT93433.1| L-lactate oxidase [Streptococcus pneumoniae SP195] gi|332074510|gb|EGI84986.1| L-lactate oxidase [Streptococcus pneumoniae GA17570] Length = 378 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CNVENPNTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L G + +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPY 364 >gi|332750103|gb|EGJ80514.1| L-lactate dehydrogenase [Shigella flexneri 4343-70] gi|332997238|gb|EGK16854.1| L-lactate dehydrogenase [Shigella flexneri K-218] Length = 396 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 115/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|146308650|ref|YP_001189115.1| L-lactate dehydrogenase [Pseudomonas mendocina ymp] gi|166990709|sp|A4XYG7|LLDD_PSEMY RecName: Full=L-lactate dehydrogenase [cytochrome] gi|145576851|gb|ABP86383.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas mendocina ymp] Length = 379 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 66/378 (17%), Positives = 125/378 (33%), Gaps = 80/378 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L + E+D S E G+K+S P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVADLSNIELRQRVLK--NMSELDLSTELFGEKMSMPVGLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-PLQEIIQPNGNTNFAD------- 170 ++ G V + A N PL+ ++Q + +A Sbjct: 141 LERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNGPLRRVLQAMTHPQWAWDVGVMGK 200 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIE 201 L+ I L + D + K++ L D Sbjct: 201 PHDLGNISAYRGNPTGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + G ++ GG + + + +L +A E + Sbjct: 261 DAVTFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R G+D+++ + LGA L F+ A+ V ++ + KE V+M L Sbjct: 303 ILADSGIRTGLDVVRMLALGADTVLLGRAFIYALAVAGQAGVSNLLDLIEKEMRVAMVLT 362 Query: 320 GTKRVQELYLNTALIRHQ 337 G K + E+ + L++ + Sbjct: 363 GAKSIAEI-TSDLLVKER 379 >gi|328957502|ref|YP_004374888.1| hydroxyacid oxidase [Carnobacterium sp. 17-4] gi|328673826|gb|AEB29872.1| hydroxyacid oxidase [Carnobacterium sp. 17-4] Length = 372 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 107/355 (30%), Gaps = 70/355 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N + + ++ R L + D S LG + P +++ + Sbjct: 48 DEFTLKQNNEAWSHKGILPRVLA--DVENPDTSTSILGHDIKVPFIMAPIA------AHG 99 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 + A +A G+ + + A +FE + L N Q+ Sbjct: 100 LAHETKEAGTAKGIAEFGGTIMSISAYSGA--TFEEIEDG----LKGNPRWFQIYMSKDD 153 Query: 135 QKAHQAVHVLGADGLF---------LHLNPLQEII--------QPNGNTNFADLSSKIAL 177 + + ADG L N ++++ P + ++L Sbjct: 154 EMNRNILDEAKADGATAIILTADSTLSGNREKDMLNKFVYPFGMPIVSRYLTGSGKNMSL 213 Query: 178 ------------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 +S +P+ +K + + D L + +G ++ GG Sbjct: 214 NNIYAQSKQKITPSDVKFISDYSGLPVFVKGIQ---TPEDASLAIGAGAAGIWVSNHGGR 270 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 D +I + + G+R G I K++ Sbjct: 271 QLDGAPGSFDTLENIS-----------------KVVAGRVPIVFDSGIRRGEHIFKALAS 313 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GA + + P L A+ V + ++ + M L GT+ ++++ Sbjct: 314 GADIVAVGRPVLYGLALGGWKGVKSVLDYFETDLRRVMQLAGTQTIEDVKNARLF 368 >gi|218886302|ref|YP_002435623.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757256|gb|ACL08155.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 339 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 109/313 (34%), Gaps = 49/313 (15%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---- 83 + L+H E + + G L P+L + + G + M ++ AA Sbjct: 56 NMRLVH------DVKEPETTTTVCGIALDMPVLAAPIGGVSFNMGGGVSEEDYAAAVVGG 109 Query: 84 -EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-- 140 + + G + + F + G + G + + Sbjct: 110 CAERGIIGCTG---------DGVPPFIIDAGFAAITGAGGRGIPFIKPWDGAELGEKLDR 160 Query: 141 -----VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 +G D L L+++ +P G A+ S+I A + +LK + + Sbjct: 161 ALELGCPAIGMDIDAAGLVTLRKMGRPVGPKTPAE-LSRIVDKVKARGMAFILKGI---M 216 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 +++D L ++ G ++ GG ++ +I Sbjct: 217 TTIDASLAVEVGADGIVVSNHGGRVLDHAPGTAEVLPEIAD-----------------AV 259 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIV 314 +A GG+R+GVD+ K + LGA L PF A+ D V ++S++ + + Sbjct: 260 KGRIAILADGGVRDGVDVFKMLALGADAVMLGRPFSIAAVGGLKDGVTMLVDSIKGQLVQ 319 Query: 315 SMFLLGTKRVQEL 327 +M L G+ V + Sbjct: 320 AMVLTGSANVASI 332 >gi|170084051|ref|XP_001873249.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650801|gb|EDR15041.1| predicted protein [Laccaria bicolor S238N-H82] Length = 485 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 118/366 (32%), Gaps = 91/366 (24%) Query: 15 KDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNNK 70 + N + F + R + P E DPS LG S P+ +S G+ + Sbjct: 142 DEVSYTENSRAFSRFFFRARVMRP---VSECDPSTTLLGYHSSIPVFVSGSALAKLGHPQ 198 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 I R AA KT + V S S N + P L L N Sbjct: 199 GEANITR----AAGKTSLIQMV-SSNASLSAQNIMD-----AAIPSQTLFFQL-YKHRND 247 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-------------------- 170 + ++ + LG +FL ++ I+ N + Sbjct: 248 EIAEKRVREM-DQLGYKAIFLTVDA---IVAGNRERDIRSPWILDDQEKGSVPVWDENNP 303 Query: 171 -----------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 I L +P+++K + C D L ++G Sbjct: 304 TGEEADMGGIAGGLVANDDRDMTWEKTIPWLRKITKLPIVIKGIQC---VEDAVLASEAG 360 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIA 263 + ++ GG ++ +P L R + + Sbjct: 361 VDGILLSNHGGRQL------------------EYSLPPMEVLLRLRQQRPDVFDKLEVYI 402 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D++K++ LGA GL FL + V+ IE LR+E I +M L+G Sbjct: 403 DGGVRRGTDVVKALCLGARAVGLGRAFLYAQSAYGEAGVLKIIEILRREIISAMRLVGAT 462 Query: 323 RVQELY 328 V++L Sbjct: 463 NVKDLK 468 >gi|330468402|ref|YP_004406145.1| aminotransferase [Verrucosispora maris AB-18-032] gi|328811373|gb|AEB45545.1| aminotransferase [Verrucosispora maris AB-18-032] Length = 799 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 120/351 (34%), Gaps = 71/351 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N+ F L R L EVDP V LG + P+ I+ + + Sbjct: 30 AGRERTLAANRDAFARIRLRPRVL--TGVTEVDPRVNVLGGVWAVPVGIAPLA---YHTL 84 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + L A AA V + V + A ++F+ + L L L Sbjct: 85 VHPDGELATARAAGACGVPLVVSTM--------AGRAFDEIRAETTAPLWLQLYP--LRD 134 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNG---------------- 164 + G D L L ++ P+G Sbjct: 135 PAATAHLVRTAERAGFDALVLTVDAPRLGRRLRDLRNGFRLPDGVVPVNLPASWRTGAAR 194 Query: 165 ------NTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + L +A L ++ +P+++K V L++ D L + +G+ ++ G Sbjct: 195 PAGHAESHFATGLTWDAVARLCASTTLPVIVKGV---LTAEDARLAVAAGVAGVVVSNHG 251 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D ++ AR A + GG+R G D+L ++ Sbjct: 252 GRQLDGAPASLDALPEV-----------------ARAVDGAAVVLLDGGVRTGADVLGAL 294 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA+ + P L A+D V + L +EF+ SMFL G V + Sbjct: 295 ALGATAVLVGRPVLHGLAVDGEQGVGEVLRILTEEFVESMFLTGLATVAAI 345 >gi|118469434|ref|YP_886850.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] gi|118170721|gb|ABK71617.1| lactate 2-monooxygenase [Mycobacterium smegmatis str. MC2 155] Length = 387 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 120/365 (32%), Gaps = 76/365 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------ 66 + N+ FD W L+ R L + E D SV+ G +L PL ++ + G Sbjct: 49 AGDERTQRVNRTAFDRWGLVPRML--NAQRERDLSVDLFGLQLPSPLFMAPI-GVLGICG 105 Query: 67 --GNNKMIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNA 104 G+ + A AA +T V M V + Q +D + Sbjct: 106 QDGHGDLAG------AQAAARTGVPMVVSTLTQDPLENVAAQFGDTPGFFQLYTPTDRDL 159 Query: 105 IKSFELRQYAPHTVLISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHL------ 153 SF +R+ + D Q A+ + Sbjct: 160 AASF-VRRAEAAGYKAIVVTLDTWVPGWRPRDLSTSNFPQLRGKCLANYTSDPVFRAGLP 218 Query: 154 NPLQEIIQPNGNTNFADL-----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P +E Q + + + L S +PL+LK + D+ G+ Sbjct: 219 QPPEENPQATVLRWVSQFGNPLTWADLPWLRSLTKLPLILKGICH---PDDVRRAKDEGV 275 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + GG + G+P L + + G+R Sbjct: 276 DGIYCSNHGGRQ------------------ANGGVPAIDCLPGVVEAADGLPVLFDSGIR 317 Query: 269 NGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 NG DI+K++ LGA+ G+ P++ A+ D +V + SL E + M + G + +L Sbjct: 318 NGADIVKALALGATAVGVGRPYVFGLALGGVDGIVHVLRSLLAEADLIMAVDGYPSLADL 377 Query: 328 YLNTA 332 +T Sbjct: 378 TPDTL 382 >gi|326469882|gb|EGD93891.1| glycolate oxidase [Trichophyton tonsurans CBS 112818] Length = 492 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 126/355 (35%), Gaps = 68/355 (19%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R + + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVM--RNVREVNTKSSILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A + + Sbjct: 198 ELGIARACQSRGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAAQLHECSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLTLPMVPAK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 313 IDPGLTWEDVKWARQHTHLPLLLKGVQ---SADDAAMAMEAGIDGIMLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + I T L L + + G+R G DILK++ LGA+ Sbjct: 370 AS---------------IITLLELHRRCPEVFDRMEIYIDSGIRRGTDILKAVCLGATAV 414 Query: 285 GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRH 336 G+ FL + + I+ +R E +M +G + + Y+NTA I H Sbjct: 415 GMGRSFLFVSNYGQEGAEHLIDIMRDELEGAMRNIGITSLDQAGPQYINTADIDH 469 >gi|301109870|ref|XP_002904015.1| peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4] gi|262096141|gb|EEY54193.1| peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4] Length = 382 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 114/356 (32%), Gaps = 80/356 (22%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N++ F L R L +D + LG ++S P+ ++ + R+ Sbjct: 44 LKENREAFKRLVLHPRVL--RDVSNMDTNTTLLGHRISSPVCVAP------SAMHRMAHP 95 Query: 79 LAIAAEKTKVAMA----VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A + A A + S S + K RQ PH + L V + + Sbjct: 96 DGEIASTSATAKADTCYILSTISTTSLEDVAK--ANRQANPHALRWYQL-YVFKDREITR 152 Query: 135 QKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFA------------------------ 169 +A G + L ++ P+ +P+ F+ Sbjct: 153 GLVRRA-EKAGYKAIVLTVDTPMLGHREPDVRNRFSLPNHLTMANFAEVGGDHENGVSSL 211 Query: 170 -----------------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + S + L S +P+++K V LS D ++ + G Sbjct: 212 KDSGLAHYVSELFDLTLNWSD-VKWLKSITKLPVVVKGV---LSPEDAKIAVDMGCEGVL 267 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ G + + D I A+ GG+R G D Sbjct: 268 VSNHGARQLDGVAATIDALPAIAE-----------------AVGGRAEVYLDGGVRRGTD 310 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 + K++ LGA L P L S +A V + L E +M GT ++ ++ Sbjct: 311 VFKALALGARAVFLGRPVLFGLAHSGEAGVSNVLRILNDELKHAMLFSGTAKLADI 366 >gi|15902671|ref|NP_358221.1| lactate oxidase [Streptococcus pneumoniae R6] gi|116517149|ref|YP_816117.1| lactate oxidase [Streptococcus pneumoniae D39] gi|148985287|ref|ZP_01818510.1| lactate oxidase [Streptococcus pneumoniae SP3-BS71] gi|148989078|ref|ZP_01820478.1| lactate oxidase [Streptococcus pneumoniae SP6-BS73] gi|148990577|ref|ZP_01821698.1| lactate oxidase [Streptococcus pneumoniae SP6-BS73] gi|168482938|ref|ZP_02707890.1| L-lactate oxidase [Streptococcus pneumoniae CDC1873-00] gi|168486792|ref|ZP_02711300.1| L-lactate oxidase [Streptococcus pneumoniae CDC1087-00] gi|168492865|ref|ZP_02717008.1| L-lactate oxidase [Streptococcus pneumoniae CDC3059-06] gi|225856393|ref|YP_002737904.1| L-lactate oxidase [Streptococcus pneumoniae P1031] gi|225860693|ref|YP_002742202.1| L-lactate oxidase [Streptococcus pneumoniae Taiwan19F-14] gi|298229176|ref|ZP_06962857.1| L-lactate oxidase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255600|ref|ZP_06979186.1| L-lactate oxidase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502501|ref|YP_003724441.1| lactate oxidase [Streptococcus pneumoniae TCH8431/19A] gi|303255868|ref|ZP_07341909.1| lactate oxidase [Streptococcus pneumoniae BS455] gi|303259977|ref|ZP_07345951.1| lactate oxidase [Streptococcus pneumoniae SP-BS293] gi|303261383|ref|ZP_07347331.1| lactate oxidase [Streptococcus pneumoniae SP14-BS292] gi|303264050|ref|ZP_07349971.1| lactate oxidase [Streptococcus pneumoniae BS397] gi|303266942|ref|ZP_07352818.1| lactate oxidase [Streptococcus pneumoniae BS457] gi|303269234|ref|ZP_07355010.1| lactate oxidase [Streptococcus pneumoniae BS458] gi|307126900|ref|YP_003878931.1| L-lactate oxidase [Streptococcus pneumoniae 670-6B] gi|15458211|gb|AAK99431.1| Lactate oxidase [Streptococcus pneumoniae R6] gi|116077725|gb|ABJ55445.1| lactate oxidase [Streptococcus pneumoniae D39] gi|147922485|gb|EDK73604.1| lactate oxidase [Streptococcus pneumoniae SP3-BS71] gi|147924184|gb|EDK75286.1| lactate oxidase [Streptococcus pneumoniae SP6-BS73] gi|147925575|gb|EDK76652.1| lactate oxidase [Streptococcus pneumoniae SP6-BS73] gi|172043612|gb|EDT51658.1| L-lactate oxidase [Streptococcus pneumoniae CDC1873-00] gi|183570243|gb|EDT90771.1| L-lactate oxidase [Streptococcus pneumoniae CDC1087-00] gi|183577120|gb|EDT97648.1| L-lactate oxidase [Streptococcus pneumoniae CDC3059-06] gi|225724620|gb|ACO20472.1| L-lactate oxidase [Streptococcus pneumoniae P1031] gi|225728122|gb|ACO23973.1| L-lactate oxidase [Streptococcus pneumoniae Taiwan19F-14] gi|298238096|gb|ADI69227.1| lactate oxidase [Streptococcus pneumoniae TCH8431/19A] gi|301793882|emb|CBW36277.1| L-lactate oxidase [Streptococcus pneumoniae INV104] gi|301799738|emb|CBW32304.1| L-lactate oxidase [Streptococcus pneumoniae OXC141] gi|301801567|emb|CBW34263.1| L-lactate oxidase [Streptococcus pneumoniae INV200] gi|302597252|gb|EFL64357.1| lactate oxidase [Streptococcus pneumoniae BS455] gi|302637517|gb|EFL68004.1| lactate oxidase [Streptococcus pneumoniae SP14-BS292] gi|302638896|gb|EFL69357.1| lactate oxidase [Streptococcus pneumoniae SP-BS293] gi|302641241|gb|EFL71612.1| lactate oxidase [Streptococcus pneumoniae BS458] gi|302643516|gb|EFL73787.1| lactate oxidase [Streptococcus pneumoniae BS457] gi|302646455|gb|EFL76681.1| lactate oxidase [Streptococcus pneumoniae BS397] gi|306483962|gb|ADM90831.1| L-lactate oxidase [Streptococcus pneumoniae 670-6B] gi|327390073|gb|EGE88416.1| L-lactate oxidase [Streptococcus pneumoniae GA04375] gi|332075996|gb|EGI86462.1| L-lactate oxidase [Streptococcus pneumoniae GA41301] gi|332077130|gb|EGI87592.1| L-lactate oxidase [Streptococcus pneumoniae GA17545] gi|332202582|gb|EGJ16651.1| L-lactate oxidase [Streptococcus pneumoniae GA41317] gi|332203871|gb|EGJ17938.1| L-lactate oxidase [Streptococcus pneumoniae GA47368] gi|332204727|gb|EGJ18792.1| L-lactate oxidase [Streptococcus pneumoniae GA47901] Length = 378 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L G + +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPY 364 >gi|332853800|ref|ZP_08434983.1| L-lactate dehydrogenase [Acinetobacter baumannii 6013150] gi|332869244|ref|ZP_08438669.1| L-lactate dehydrogenase [Acinetobacter baumannii 6013113] gi|332875543|ref|ZP_08443356.1| L-lactate dehydrogenase [Acinetobacter baumannii 6014059] gi|332728392|gb|EGJ59769.1| L-lactate dehydrogenase [Acinetobacter baumannii 6013150] gi|332732866|gb|EGJ64079.1| L-lactate dehydrogenase [Acinetobacter baumannii 6013113] gi|332736246|gb|EGJ67260.1| L-lactate dehydrogenase [Acinetobacter baumannii 6014059] Length = 383 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYAEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKTISDI-NTDCLVQ 377 >gi|322705034|gb|EFY96623.1| (S)-2-hydroxy-acid oxidase, putative [Metarhizium anisopliae ARSEF 23] Length = 379 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 101/327 (30%), Gaps = 46/327 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + N + + + L R L +IS E S LG S P IS Sbjct: 73 AAGEYSYRNNLEVYRRYRLRPRVLVDISNIESTLSTTILGHNFSAPFFISPCARADYAHA 132 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 IN A + D A K P VL L ++ N Sbjct: 133 DAEIN--FVKGAAAGNIL-----YMRSIEDIAAAK-------KPGQVLFQQL-YLESNET 177 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI---------ALLSSAM 182 F + + GA + ++ + + + L + Sbjct: 178 FNKELFERT-EKAGAKAIIFTVDSAADGNRHRAARFGVGSADSSYSAFSWTFYEQLRNQT 236 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P++LK + ++ D E +K + ++ GG S ++ ++ Sbjct: 237 KLPIILKGI---MTVEDAEEAIKRKVPAIILSNHGGRQLDGSPSALEVALEMYEKDP--- 290 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 E + +A GG+R GVD + + LG GL PF+ + V Sbjct: 291 -----------KMFQEIEVLADGGIRYGVDAIMLLSLGVKAVGLGRPFMYSNIYGQAGVE 339 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYL 329 I+ ++ E + G + +L Sbjct: 340 KVIQIMKHEIAID---AGNLGIPDLRN 363 >gi|326794981|ref|YP_004312801.1| L-lactate dehydrogenase (cytochrome) [Marinomonas mediterranea MMB-1] gi|326545745|gb|ADZ90965.1| L-lactate dehydrogenase (cytochrome) [Marinomonas mediterranea MMB-1] Length = 381 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 115/371 (30%), Gaps = 73/371 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + RN F+ L+ L +VD SV +G+KL P+ S T + Sbjct: 34 DESTYRRNTSAFETCDLVPNVL--TGVKDVDLSVTVMGQKLDMPVYCSP-TALQRLFHHQ 90 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 R +A AAEK V S + + + + ++ Q+ H N ++ Sbjct: 91 GERAVAAAAEKYGTMFGVSSLGTVSMEDIAKQVDTPQVYQFYFHKDRGLNRVMMERAKAS 150 Query: 133 GVQKAHQAVHVLG------------ADGLFLHLN-PLQEIIQPN---------------- 163 G+Q V + + L LN LQ I+P Sbjct: 151 GIQVMMLTVDSITGGNRERDLRTGFSIPFRLTLNGMLQFAIKPMWGINYVTHEKFSLPQL 210 Query: 164 ------------------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + +A + D LK + +S D + Sbjct: 211 AEHIDMDGGATSIGDYFTNMLDPSMNWDDVAEMVKFWDGQFCLKGI---MSREDARRAVD 267 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G I+ GG S D +I +E I Sbjct: 268 IGCTGIVISNHGGRQLDGSRSSFDQLEEI-----------------VDEVGDEIDVILDS 310 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G++ G +LK++ LGA G+ +L P A V A+ +R E M L+G V Sbjct: 311 GVQRGTHVLKALSLGAKAVGIGRMYLYPLAAAGQPGVERALGLMRSELERDMKLMGKTSV 370 Query: 325 QELYLNTALIR 335 +L R Sbjct: 371 DQLTRANLRFR 381 >gi|148997214|ref|ZP_01824868.1| hydroxyethylthiazole kinase [Streptococcus pneumoniae SP11-BS70] gi|149003321|ref|ZP_01828210.1| lactate oxidase [Streptococcus pneumoniae SP14-BS69] gi|149020354|ref|ZP_01835246.1| lactate oxidase [Streptococcus pneumoniae SP23-BS72] gi|168575372|ref|ZP_02721308.1| L-lactate oxidase [Streptococcus pneumoniae MLV-016] gi|225858529|ref|YP_002740039.1| L-lactate oxidase [Streptococcus pneumoniae 70585] gi|237650049|ref|ZP_04524301.1| L-lactate oxidase [Streptococcus pneumoniae CCRI 1974] gi|237822722|ref|ZP_04598567.1| L-lactate oxidase [Streptococcus pneumoniae CCRI 1974M2] gi|307067320|ref|YP_003876286.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] gi|147756914|gb|EDK63954.1| hydroxyethylthiazole kinase [Streptococcus pneumoniae SP11-BS70] gi|147758504|gb|EDK65502.1| lactate oxidase [Streptococcus pneumoniae SP14-BS69] gi|147930656|gb|EDK81638.1| lactate oxidase [Streptococcus pneumoniae SP23-BS72] gi|183578548|gb|EDT99076.1| L-lactate oxidase [Streptococcus pneumoniae MLV-016] gi|225721294|gb|ACO17148.1| L-lactate oxidase [Streptococcus pneumoniae 70585] gi|306408857|gb|ADM84284.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase [Streptococcus pneumoniae AP200] Length = 378 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CNVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L G + +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPY 364 >gi|16273624|ref|NP_439882.1| L-lactate dehydrogenase [Haemophilus influenzae Rd KW20] gi|260580701|ref|ZP_05848528.1| L-lactate oxidase [Haemophilus influenzae RdAW] gi|1170799|sp|P46454|LLDD_HAEIN RecName: Full=L-lactate dehydrogenase [cytochrome] gi|1574598|gb|AAC23385.1| L-lactate dehydrogenase (lctD) [Haemophilus influenzae Rd KW20] gi|260092763|gb|EEW76699.1| L-lactate oxidase [Haemophilus influenzae RdAW] Length = 381 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 118/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ + V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAEGRQGVENMLDIFKKEMHVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 ADIK 371 >gi|317047092|ref|YP_004114740.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] gi|316948709|gb|ADU68184.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] Length = 396 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWQDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L FL A V + + KE V+M L G K + ++ Sbjct: 313 LDVVRMIALGADSVLLGRAFLYALATHGQRGVENLLNLIEKEMKVAMTLTGAKTIADITR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|116620760|ref|YP_822916.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116223922|gb|ABJ82631.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 392 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 110/352 (31%), Gaps = 60/352 (17%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 D + N++ + L R L + ++ D E G + P+ +S++ G+ K Sbjct: 64 DVTLQANREAMTHYQLRARRL--MGVEQADLRTEVFGAEWEMPIYVSAV--GSQKAFHPE 119 Query: 76 NR-NLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFEL--------------RQYAP 115 A AA+ + + + A ++L R A Sbjct: 120 GELATARAAKSRNAMQMLSTVSSTSVEDVSMALGAAPWYQLYMPVPWGDTEKMVKRAEAA 179 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT---NFADLS 172 ++ + + + + A ++ H I P N FA LS Sbjct: 180 GCPVL--VWTIDILGGRNTETATRSARSDTRQCSSCHSVSPMAGITPERNRTRPMFAGLS 237 Query: 173 SKIA----------LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 I L + ++LK + C D +L + G ++ GG + Sbjct: 238 GSINPAAADWTYVDRLKKITKMKVVLKGIDCA---EDAKLAREHGADGLIVSNHGGRATE 294 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 D+ ++ + GG R G D+LK++ LGA Sbjct: 295 TGRGTLDILPEV-----------------VEATAGQTPVFVDGGFRRGTDVLKALALGAR 337 Query: 283 LGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 G+ P A + V +E LR E ++M G ++ L Sbjct: 338 AVGIGRPYIWGLAAFGQEGVERVLEILRAELALTMRQCGIASTAQITRAAVL 389 >gi|313500645|gb|ADR62011.1| LldD [Pseudomonas putida BIRD-1] Length = 381 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 119/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + E+ + + LS P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVSDLAGIALRQRVL--NNMSELSLETKLFDETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVA--MAVGSQRVMFSDHNAIK---SFELRQYAPHTVLISNLGA 125 E A AA + M+ S + AI F+L + A Sbjct: 87 RGEV---QAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-----PLQEIIQPN---------- 163 ++ GV+ V + A N LQ + P Sbjct: 141 LERARAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGR 200 Query: 164 ---------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + D P+++K + L + Sbjct: 201 PHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGI---LDAD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D +K G ++ GG + + + +L +A Sbjct: 258 DARDAVKFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M Sbjct: 300 DLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + E+ ++ + Sbjct: 360 VLTGAKSISEITRDSLV 376 >gi|156058067|ref|XP_001594957.1| hypothetical protein SS1G_04765 [Sclerotinia sclerotiorum 1980] gi|154702550|gb|EDO02289.1| hypothetical protein SS1G_04765 [Sclerotinia sclerotiorum 1980 UF-70] Length = 509 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 114/348 (32%), Gaps = 66/348 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT-----GGNNKMIER 74 N + L R + + D S LG+++ P+ +S +M G + + Sbjct: 154 NNAVYRRILLRPRVF--VDCTKCDSSTTILGQEVGLPIFVSPAAMARLAHPAGEQGIGKG 211 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL---RQYAPHTVLISNLGAVQ---- 127 I+ + + A Q V S I ++L + ++ + A+ Sbjct: 212 IS-SFGAVQIVSNNASMTPEQIVEGSLPGQIFGWQLYVQNERKKSEAMLQRINAMSDKYK 270 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQPNGNTNFAD----------- 170 L D V + G L ++ +E ++ N Sbjct: 271 FIVLTLDAPVPGKREHDERQKDVGANLPVSSSVKAKEKLEDNSPPAGKGGVGKQLFMGTA 330 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRI 224 + + L+ +P++LK + + D L + + ++ GG + Sbjct: 331 ADLTWKNTLPWLAQHTKLPIVLKGIQ---THEDAYLASQYAPQIKGIILSNHGGRALDTA 387 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILG 280 P +L + YC E + GG++ G D++K++ LG Sbjct: 388 P------------------PAIHTLMEIQKYCPEVLSRIEVWVDGGIKRGTDVVKALCLG 429 Query: 281 ASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A G+ L + V E L+ E M LLG +++ EL Sbjct: 430 AKAVGVGRAALFGLGAGGPEGVERTFEILKSEMETCMRLLGVEKISEL 477 >gi|84386756|ref|ZP_00989781.1| L-lactate dehydrogenase [Vibrio splendidus 12B01] gi|84378284|gb|EAP95142.1| L-lactate dehydrogenase [Vibrio splendidus 12B01] Length = 379 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 124/373 (33%), Gaps = 83/373 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + L R L +++ E G+KL+ P+ ++ + TG + E Sbjct: 32 EHTLRRNTADLAEIALKQRVL--NDMSDLNLETELFGEKLAMPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNL 123 A AA+ + + + V + A + F+L R + + + + Sbjct: 90 V---QAAKAADNKGIPFTMSTVSVCPIEEVAPRIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAIRRV--FQSMRHPSWAVDVGLLGKPHDL 204 Query: 163 ------NGNT----NFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G+ ++ + + D P+++K + L D + Sbjct: 205 GNISTYRGSPTKLEDYIGWLGDNFDPSISWKDLEWIRDFWDGPMVIKGI---LDEEDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPAIADAVKGDTKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G+D+++ + +GA L F+ A V ++ KE V+M L G Sbjct: 304 LVDSGIRTGLDVVRMMAMGADCTLLGRSFVYALAAQGQAGVENLLDLYDKEMRVAMTLTG 363 Query: 321 TKRVQELYLNTAL 333 K +++L ++ + Sbjct: 364 AKTIKDLTRDSLV 376 >gi|150398700|ref|YP_001329167.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium medicae WSM419] gi|150030215|gb|ABR62332.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium medicae WSM419] Length = 381 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 122/373 (32%), Gaps = 73/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN F+ L+ L EVD SV +G+KL+ P+ S T Sbjct: 32 ADDEVTLRRNAAAFEACDLVPNVL--CGVAEVDMSVTVMGQKLAMPVYCSP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAI-KSFELRQYAPHTVLISNLGAVQLNY 130 + R +A AA KT V S V + I + ++ Q+ H N +Q Sbjct: 89 HQGERAVAAAASKTGTMFGVSSLGTVSLEEARRIGQGPQVYQFYFHKDRGLNRAMMQRAK 148 Query: 131 DFGVQKAHQAVHVLG--------------------ADGLFLHLNPLQEII---------- 160 + GV+ V + A L P I Sbjct: 149 EAGVEAMMLTVDSITGGNRERDKRTGFSIPFRLNLAGITQFALKPAWAINYLTHERFALP 208 Query: 161 -------QPNG----NTNFADLSS------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + F ++ +A + P LK V +S D + Sbjct: 209 QLDGHVDMGGGTMSISRYFTEMLDPALHWDDVAEMVGEWGGPFCLKGV---MSVADAKRA 265 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + G ++ GG + D ++I + + Sbjct: 266 VDIGCAGLVLSNHGGRQLDGSRTAFDQLAEI-----------------VDAVGDRIDVMM 308 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG++ G ++K++ LGA GL +L P A V A++ +R E SM L+G K Sbjct: 309 DGGVQRGTHVIKALSLGAKAVGLGRYYLFPLAAAGQAGVERALDLMRLEIERSMKLMGCK 368 Query: 323 RVQELYLNTALIR 335 V +L + R Sbjct: 369 CVDDLTRSNLRFR 381 >gi|2385386|emb|CAA04758.1| L-mandelate dehydrogenase [Rhodotorula graminis] Length = 565 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 123/367 (33%), Gaps = 87/367 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG----GN 68 + + ++ + R L ++ +D + FLG P+ ++ G G+ Sbjct: 220 AETEQTLRDEREAWQRVRFRPRVLRKMR--HIDTNTTFLGIPTPLPIFVAP-AGLARLGH 276 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + I R +A K + V S + + FE+++ + ++ V Sbjct: 277 PDGEQNIVRGVA----KHDILQVVSSGAS----CSIDEIFEVKEPDQN---LAWQFYVHS 325 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNP--------------------------------- 155 + +K +A+ LGA +F+ ++ Sbjct: 326 DKKIAEEKLKRAL-ALGAKAIFVTVDVPVLGKRERDLKLKARSQNYEHPIAAQWKAAGSK 384 Query: 156 LQEIIQPNGNTNFADL--------SSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKS 206 ++E I G ++ D IA + VP+++K VGC D+EL + Sbjct: 385 VEETIAKRGVSDIPDTAHIDANLNWDDIAWIKERAPGVPIVIKGVGC---VEDVELAKQY 441 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFI 262 G ++ G + D+ L R E + Sbjct: 442 GADGVVLSTHGARQLDGARAPLDV------------------LIEVRRKNPALLKEIEVY 483 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G R G D+LK++ LGA G FL + +D V AI L E +M LLG Sbjct: 484 VDGQARRGTDVLKALCLGARGVGFGRGFLYAQSAYGADGVDKAIRILENEIQNAMRLLGA 543 Query: 322 KRVQELY 328 + +L Sbjct: 544 NTLADLK 550 >gi|218691892|ref|YP_002400104.1| L-lactate dehydrogenase [Escherichia coli ED1a] gi|306816044|ref|ZP_07450182.1| L-lactate dehydrogenase [Escherichia coli NC101] gi|259494975|sp|B7N251|LLDD_ECO81 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|218429456|emb|CAR10422.2| L-lactate dehydrogenase, FMN-linked [Escherichia coli ED1a] gi|305850440|gb|EFM50897.1| L-lactate dehydrogenase [Escherichia coli NC101] Length = 396 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 114/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ + + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALGPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+RNG+D+++ I LGA L FL A V + + KE V+M L Sbjct: 302 AILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G K + E+ ++ + Sbjct: 362 TGAKSISEITQDSLV 376 >gi|195582302|ref|XP_002080967.1| GD10762 [Drosophila simulans] gi|194192976|gb|EDX06552.1| GD10762 [Drosophila simulans] Length = 366 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 118/334 (35%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISTKIFGEQMQWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + IA L S + Sbjct: 171 NNFSLPSHLTLANFQGVKATGVGNAAVGASGINEYVSSQFDPTITW--KDIAWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 229 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + L+K+F ++M L+G + + ++ +A++ H+ Sbjct: 329 MLSVLKKDFEITMALIGCQSLGDI--TSAMVVHE 360 >gi|169632102|ref|YP_001705838.1| L-lactate dehydrogenase [Acinetobacter baumannii SDF] gi|239504289|ref|ZP_04663599.1| L-lactate dehydrogenase [Acinetobacter baumannii AB900] gi|259494961|sp|B0VND0|LLDD_ACIBS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|169150894|emb|CAO99500.1| L-lactate dehydrogenase, FMN linked [Acinetobacter baumannii] Length = 383 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYAEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NTDCLVQ 377 >gi|126668762|ref|ZP_01739711.1| putative L-lactate dehydrogenase [Marinobacter sp. ELB17] gi|126626799|gb|EAZ97447.1| putative L-lactate dehydrogenase [Marinobacter sp. ELB17] Length = 395 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 112/387 (28%), Gaps = 101/387 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD++ + RAL + +V E GK+ + P I+ M G + Sbjct: 37 AEDGKTLHANRSAFDNYCFLPRAL--VDVSKVSLQTELFGKQYAAPFGIAPM-GISALSA 93 Query: 73 ERINRNLAIAAEKTKVAM-AVGSQRVMFSD---HNAIKSFELRQYAPHTVLISNLGAVQL 128 R ++ LA A K + M GS + D N F+ A Sbjct: 94 YRGDKVLAEGAAKANIPMIMSGSSLIPMEDVSGPNGTDWFQ---------------AYLP 138 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLN----PLQE---------------IIQPNGNTNFA 169 + G++ V G L + ++ P E + NG Sbjct: 139 GDEEGIEALLARVEKSGFKNLVITVDYPVPPNSENHVRSGFSSPLRPSVRLLINGLLRPR 198 Query: 170 DLSSKIALLSSAMDVP------------LLLKE--------------------------- 190 L +P ++ K Sbjct: 199 WLFGTFIRTLINFGMPHFENNYATRGISVISKNVNRDFSGRSHLNWESLALVRRLWPGNL 258 Query: 191 -VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V L D +G ++ GG G P+++ Sbjct: 259 IVKGILHPQDALKAEAAGADGIIVSNHGGRQLD-------------------GTIAPMNV 299 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESL 308 A + G R G D+LK++ LGA + F A + V A + L Sbjct: 300 LSAIVKAVSLPVMIDSGFRRGSDVLKALGLGAKFVFVGRSFNYAAAYAGEEGVSHAAKLL 359 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E +M LLG RV+E+ ++ Sbjct: 360 SAEIQRNMALLGINRVEEMNSERMCLK 386 >gi|237738272|ref|ZP_04568753.1| dehydrogenase [Fusobacterium mortiferum ATCC 9817] gi|229420152|gb|EEO35199.1| dehydrogenase [Fusobacterium mortiferum ATCC 9817] Length = 338 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 113/314 (35%), Gaps = 42/314 (13%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA- 80 N + + L+ R + + E S LG++LSFP+L + +TG M + Sbjct: 48 NYESLKNIKLVLRTIH--NATEPKLSCTLLGRELSFPVLGAPITGTKFNMGGGVTEEEYC 105 Query: 81 ----IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 + +G D + F L+ L V + ++ Sbjct: 106 NDIIEGCLEAGSIGMIGDTG----DPTCYE-FGLQAIKKVGGL-----GVAIIKPRSNEE 155 Query: 137 AHQAVHVLG-ADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + + + A + + ++ + G + L ++ +P + K + Sbjct: 156 IIKRIRMAEEAGAIAVGVDLDGAGLVTMKLFGQPVGPKTVEDLKELVASTKLPFIAKGI- 214 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 +S + +++G+ ++ GG ++ ++ DI Sbjct: 215 --MSVDEALACVEAGVNTIVVSNHGGRVLDYCQASCNVLEDI-----------------V 255 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKE 311 + ++ +A G +R GVD+LK + LGA + P + ++ + V + +L+ + Sbjct: 256 KAVGDKITVLADGSVREGVDVLKYLALGAKGVLVGRPLIWGSIGGRKEGVTTIMNTLKSQ 315 Query: 312 FIVSMFLLGTKRVQ 325 +M L GT V+ Sbjct: 316 LSQAMILTGTDDVK 329 >gi|121610027|ref|YP_997834.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Verminephrobacter eiseniae EF01-2] gi|121554667|gb|ABM58816.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Verminephrobacter eiseniae EF01-2] Length = 395 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 109/353 (30%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ ++ L+ R L ++ V+ LG+ + P+L++ + +M Sbjct: 42 AADEITLAANRSAWERIRLLPRVLRPLAGGH--TRVQLLGRTWAHPILLAPVA--YQRMA 97 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + A A V S + + +R L L +Q + F Sbjct: 98 HPDGELGSACAAAALGAGIVLSTQASTRLEVVAE--AIRSDPGRGPLWFQL-YLQHDRGF 154 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL------------------------------------ 156 +A G + L L ++ Sbjct: 155 TRALLERA-EQAGYEALVLTVDAPCHGARDRERRAGFHLPCGVSAVNLHGLRPAPRVTLQ 213 Query: 157 --QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 Q + + + + L + +P+LLK + + D G+ ++ Sbjct: 214 ADQSALFDGLLRHAPTWAD-VQWLQANTRLPVLLKGL---MHPDDARQAAALGVAGLIVS 269 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + + + +A + GG+R G D+L Sbjct: 270 NHGGRTLDTSPGTASVLPRVADA-------------VAHSATGPLALLVDGGIRRGTDVL 316 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 K++ LGAS + P L A + V + LR E ++M L G + E Sbjct: 317 KAMALGASAVLIGRPALYGLANAGAAGVAHVLRLLRDELEIAMALTGCATLAE 369 >gi|260595955|ref|YP_003208526.1| L-lactate dehydrogenase [Cronobacter turicensis z3032] gi|260215132|emb|CBA26917.1| L-lactate dehydrogenase [cytochrome] [Cronobacter turicensis z3032] Length = 401 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K ++E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGEQGVANLLNLIEKEMRVAMTLTGAKSIKEITR 372 Query: 330 NTAL 333 + + Sbjct: 373 ESLV 376 >gi|114705741|ref|ZP_01438644.1| glycolate oxidase [Fulvimarina pelagi HTCC2506] gi|114538587|gb|EAU41708.1| glycolate oxidase [Fulvimarina pelagi HTCC2506] Length = 381 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 109/380 (28%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + RN FD+ L+ L EVD S LG++L P+ S Sbjct: 32 ADDETTYARNTAAFDEVDLVPNILGG--VAEVDLSTTVLGQRLDLPVYCSPTALQRLFHH 89 Query: 66 ------GGNNKMIER----------------------------------INRNLAIAAEK 85 G + +NR + A++ Sbjct: 90 EGERAVGAAAEKFGTMFGVSSLGTVSLEELRKKHSNPQVYQFYFHKDRGLNRAMMERAKE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQ-----LNYDFGVQK 136 V + V S + + F + + + L + F + + Sbjct: 150 AGVEVMMLTVDSITGGNRERDKRTGFSIPFRLNARGIAEFALKPAWAINYLTHEKFALPQ 209 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + V + G E++ P +A + P LK V ++ Sbjct: 210 LDEHVDMGGGTASI--GQYFTEMLDPGMT------WDDVAEMVELWGGPFCLKGV---MA 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + G I+ GG + D +I + Sbjct: 259 PDDAVRAAEIGCAGIVISNHGGRQLDGSRASFDQLDEI-----------------VQAAG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + I G+ G +LK++ LGA GL +L P A V A+ +R E + Sbjct: 302 DRLDVILDSGVTRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALTLMRDELVRD 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G R+ +L R Sbjct: 362 MRLMGRTRIDQLSRENLRFR 381 >gi|325124056|gb|ADY83579.1| L-lactate dehydrogenase, FMN linked [Acinetobacter calcoaceticus PHEA-2] Length = 383 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYSEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSMFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NADCLVQ 377 >gi|148653479|ref|YP_001280572.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] gi|148572563|gb|ABQ94622.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Psychrobacter sp. PRwf-1] Length = 403 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 124/371 (33%), Gaps = 71/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ + P+ I+ TG M Sbjct: 36 QTTYRNNETDFDRIKLRQRVL--VDMDNRSLATQMIGEDVKMPIAIAP-TGFTGMMWANG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI-----SN 122 + A AA+ V ++ + + + A + + +R LI +N Sbjct: 93 EMHAAKAAKDFGVPFSLSTMSINSIEDVAEYTNHPFWFQLYVMRDKDFMANLIRRAKEAN 152 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL- 171 A+ L D V Q+ + L A N L + +P F ++ Sbjct: 153 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLANILNLMTKPEWCFNMLGAKRRTFGNIV 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L++K + + D L +S Sbjct: 213 GHAKGVGDLSSLSSWTAEQFDPSLSWDDVARIKDMWGGKLIIKGI---MEPEDAILAARS 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G I+ GG S S++ ++ + ++ + G Sbjct: 270 GADAMVISNHGGRQLDGAPSSIACLSEV--------------VQAVQAEKSDIEVWLDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+I LGA + FL D V A+E L KE ++M G + Sbjct: 316 IRSGQDVLKAIALGAKGTMVGRAFLYGLGAYGEDGVRRALEILYKECDITMAFCGRTNIS 375 Query: 326 ELYLNTALIRH 336 ++ + L++ Sbjct: 376 DV-TDDILVKG 385 >gi|317154194|ref|YP_004122242.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio aespoeensis Aspo-2] gi|316944445|gb|ADU63496.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio aespoeensis Aspo-2] Length = 340 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 107/328 (32%), Gaps = 43/328 (13%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N L R + D SV LG L+ P+L + + G + M Sbjct: 42 SFKNNVTALAGVRLNMRLVH--DVSAPDTSVSLLGLDLAMPVLAAPIGGVSFNMGGG--- 96 Query: 78 NLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISN--LGAVQLNYDFGV 134 +E+ + VG R + + + + ++ G + G Sbjct: 97 ----VSEEEYIEAVVGGCRDSGVIGCTGDGVPPVIHESGYAAISASDGHGIPFIKPWEGP 152 Query: 135 QKAHQA-------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + A + + G D L L+++ +P A+L I + Sbjct: 153 ELAEKLDKARTTGCSIFGMDVDAAGLVTLRQMGRPVSPKTPAELEKIIEE-VHGWGGKFI 211 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 LK + ++ + L + G ++ GG ++ ++ Sbjct: 212 LKGI---MTPDEALLAARVGADAIVVSNHGGRVLDHTPGTVEVLPEVAA----------- 257 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIE 306 + GG+R+G D+LK + LGA + P A+ + VV + Sbjct: 258 ------AVRGRLAILVDGGVRDGADVLKMLALGADAVMIGRPVSVAAVGGLREGVVKYLA 311 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L+ + I +M L G+ + + +I Sbjct: 312 ALKGQLIQAMVLTGSADIAS--VTPRVI 337 >gi|321468881|gb|EFX79864.1| hypothetical protein DAPPUDRAFT_304364 [Daphnia pulex] Length = 370 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 129/363 (35%), Gaps = 66/363 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 ++ + N++ F W L+ R L + ++ + LG ++S P I+ Sbjct: 31 ADEEQTLRENRESFKRWRLMPRMLRGVQNRSMNTTA--LGCRVSAPFGIAPTAMQRMAHP 88 Query: 66 -----GGNNKMIERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 I L+ A ++A A + F + ++ RQ + Sbjct: 89 DGECATAKAAAAHGIIYILSTIATSSIEEIAEAAPNGINWF----QLYIYKDRQATIDLI 144 Query: 119 LIS---NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-----NPLQE------IIQPNG 164 + N A+ + D V + V+ L HL N + E + + G Sbjct: 145 RRAERANFKALVVTVDTAV-LGRRLVNERHGFDLPPHLKLGNFNTVDEKSDFHTVQKEEG 203 Query: 165 NT---------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + I L S +P++LK + L D EL ++ G+ ++ Sbjct: 204 SRLAAYASVMFDSSLTWKDIDWLKSITKLPIVLKGI---LRPDDAELAVQHGVSAIGVSN 260 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG +++ D I + + GG+ G D+LK Sbjct: 261 HGGRQLDGVQATIDALPAI-----------------VKQVNGRCEVFLDGGVTRGTDVLK 303 Query: 276 SIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + P L S + V I+ L+ E V+M L G V E+ ++ ++ Sbjct: 304 ALALGAKMTFFGRPTLWGLAHSGEQGVKNIIQLLKTEIDVAMALSGCSSVDEI-DSSLVL 362 Query: 335 RHQ 337 R + Sbjct: 363 RQE 365 >gi|260554104|ref|ZP_05826366.1| L-lactate dehydrogenase FMN linked [Acinetobacter sp. RUH2624] gi|299772034|ref|YP_003734060.1| L-lactate dehydrogenase [Acinetobacter sp. DR1] gi|260404782|gb|EEW98290.1| L-lactate dehydrogenase FMN linked [Acinetobacter sp. RUH2624] gi|298702122|gb|ADI92687.1| L-lactate dehydrogenase [Acinetobacter sp. DR1] Length = 383 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYSEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSMFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NADCLVQ 377 >gi|322391634|ref|ZP_08065102.1| lactate 2-monooxygenase [Streptococcus peroris ATCC 700780] gi|321145445|gb|EFX40838.1| lactate 2-monooxygenase [Streptococcus peroris ATCC 700780] Length = 378 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGIRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|293611231|ref|ZP_06693529.1| L-lactate dehydrogenase [Acinetobacter sp. SH024] gi|292826482|gb|EFF84849.1| L-lactate dehydrogenase [Acinetobacter sp. SH024] Length = 381 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYSEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSMFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NADCLVQ 377 >gi|218677139|ref|YP_002395958.1| L-lactate dehydrogenase [Vibrio splendidus LGP32] gi|218325407|emb|CAV27520.1| L-lactate dehydrogenase [Vibrio splendidus LGP32] Length = 382 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 124/376 (32%), Gaps = 86/376 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + RN + L R L +++ E G+KL+ P+ ++ + TG + E Sbjct: 32 EHTLRRNTADLAEIALKQRVL--NDMSDLNLETELFGEKLAMPIALAPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNL 123 A AA+ + + + V + A K F+L R + + + + Sbjct: 90 V---QAAKAADNKGIPFTMSTVSVCPIEEVAPKIERPMWFQLYVLKDRGFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D V A + G + + Q + P Sbjct: 147 AGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAIRRV--FQSMRHPSWAVDVGLLGKPHDL 204 Query: 163 ------NGNT----NFADLS-------------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G+ ++ + + D P+++K + L D Sbjct: 205 GNISTYRGSPTKLEDYIGWLGDMGDNFDPSISWKDLEWIRDFWDGPMVIKGI---LDEED 261 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 + ++ G ++ GG + + + +L +A + Sbjct: 262 AKDAVRFGADGIVVSNHGGRQLDGV------------------LSSAKALPAIADAVKGD 303 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 + + G+R G+D+++ + +GA L F+ A V ++ KE V+M Sbjct: 304 TKILVDSGIRTGLDVVRMMAMGADCTLLGRSFVYALAAQGQAGVENLLDLYDKEMRVAMT 363 Query: 318 LLGTKRVQELYLNTAL 333 L G K +++L ++ + Sbjct: 364 LTGAKTIKDLTRDSLV 379 >gi|331087147|ref|ZP_08336218.1| hypothetical protein HMPREF0987_02521 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409116|gb|EGG88573.1| hypothetical protein HMPREF0987_02521 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 340 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 109/319 (34%), Gaps = 42/319 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN + + + + E +EVD S G++ +P + N E+ N Sbjct: 47 RNFDKWQEIRVQMDTISE--HEEVDTSFVLWGQRFRYPFFAGPVGAVNLHYGEKYND--- 101 Query: 81 IAAEKTKVAMAVGSQRVMFS-------DHNAIK--SFELRQYAPHTVLISNLGAVQLNYD 131 + M + + + +K + +R+ + +++ + Sbjct: 102 ---QSYNDMMVAACAEAGIAAMTGDGVNPDVMKYATDAIRRVEGKGIPTIKPWNIEIIRE 158 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 Q + D L L+ + P G + ++ ++ VP + K + Sbjct: 159 KMKQAEGSGAFAVAMDIDAAGLPFLKNMTPPAGRKS----VEELRQVAEMAKVPFIAKGI 214 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 +++ +++G+ ++ GG + + ++ I Sbjct: 215 ---MTARGAIKAVEAGVDAIVVSNHGGRVLDQCPATAEVLPAI----------------- 254 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRK 310 + + GG+R+GVD+ K++ LGA + PF+ + V IE + Sbjct: 255 VEAVQGKVKIFVDGGIRSGVDVFKALALGADGVLICRPFVTAVYGGGMEGVKTYIEKIGA 314 Query: 311 EFIVSMFLLGTKRVQELYL 329 E +M + G ++E+ Sbjct: 315 ELADTMAMCGANSLKEITK 333 >gi|325663629|ref|ZP_08152036.1| hypothetical protein HMPREF0490_02777 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470315|gb|EGC73547.1| hypothetical protein HMPREF0490_02777 [Lachnospiraceae bacterium 4_1_37FAA] Length = 340 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 112/317 (35%), Gaps = 38/317 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 RN + + + + E +EVD S G+K +P + N E+ N Sbjct: 47 RNFDKWQEIRVQMDTISE--HEEVDTSFVLWGQKFRYPFFAGPVGAVNLHYGEKYNDQSY 104 Query: 79 ---LAIAAEKTKVAMAVGSQRVMFSDHNAIK--SFELRQYAPHTVLISNLGAVQLNYDFG 133 + A + +A G + + +K + +R+ + +++ + Sbjct: 105 NDVMVAACAEAGIAAMTGDG----VNPDVMKYATDAIRRVEGKGIPTIKPWNIEIIREKM 160 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 Q + D L L+ + P G + ++ ++ VP + K + Sbjct: 161 KQAEGSGAFAVAMDIDAAGLPFLKNMTPPAGRKS----VEELRQVAEMAKVPFIAKGI-- 214 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 +++ +++G+ ++ GG + + ++ I Sbjct: 215 -MTARGAIKAVEAGVDAIVVSNHGGRVLDQCPATAEVLPAI-----------------VE 256 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEF 312 + + GG+R+GVD+ K++ LGA + PF+ + V IE + E Sbjct: 257 AVQGKVKIFVDGGIRSGVDVFKALALGADGVLICRPFVTAVYGGGMEGVKTYIEKIGAEL 316 Query: 313 IVSMFLLGTKRVQELYL 329 +M + G ++E+ Sbjct: 317 ADTMAMCGANSLKEITK 333 >gi|26991419|ref|NP_746844.1| L-lactate dehydrogenase [Pseudomonas putida KT2440] gi|148549804|ref|YP_001269906.1| L-lactate dehydrogenase [Pseudomonas putida F1] gi|81840443|sp|Q88DT3|LLDD_PSEPK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|166990710|sp|A5W9B2|LLDD_PSEP1 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|24986490|gb|AAN70308.1|AE016671_9 L-lactate dehydrogenase [Pseudomonas putida KT2440] gi|148513862|gb|ABQ80722.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas putida F1] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 118/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + E+ + + LS P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVSDLAGIALRQRVL--NNMSELSLETKLFDETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-----PLQEIIQPN---------- 163 ++ GV+ V + A N LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGR 200 Query: 164 ---------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + D P+++K + L + Sbjct: 201 PHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGI---LDAD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D +K G ++ GG + + + +L +A Sbjct: 258 DARDAVKFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M Sbjct: 300 DLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + E+ ++ + Sbjct: 360 VLTGAKSISEITRDSLV 376 >gi|184200876|ref|YP_001855083.1| putative L-lactate dehydrogenase [Kocuria rhizophila DC2201] gi|183581106|dbj|BAG29577.1| putative L-lactate dehydrogenase [Kocuria rhizophila DC2201] Length = 413 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 109/362 (30%), Gaps = 72/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--K 70 ++ R+++ F+ L+ R L D S E G + + P I+ TG Sbjct: 58 AGQELTYRRSREAFESVELLPRILHGTDTA--DLSTEITGFRSALPFGIAP-TGFTRFMH 114 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFEL---RQYAPHTVLIS 121 I AAE+ + ++ + + +A + F+L R++ LI Sbjct: 115 SEGEIGG--VRAAERAGIPFSLSTMGTRSIEEVRDAAPDAERWFQLYLWREHDASLDLIR 172 Query: 122 NLGAVQ-------------------------LNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 A + + A + FL + L Sbjct: 173 RAKAAGTTTLLVTVDTPVPGQRLRDTRNGMVIPPRLTPKTVLDASYRPEWWFNFLTTDSL 232 Query: 157 QEIIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + ADL + + + D L +K V L+ D + Sbjct: 233 KFASLSDTSGALADLISTMFDPGLNLADLEWIREQWDGTLYVKGV---LTREDARRAMSV 289 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R ++ + I G Sbjct: 290 GADGLVVSNHGGRQLDRAPVSLTALPELRD-----------------EVGPDVPLILDSG 332 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +G D++ ++ GA + +L M + V IE L + +M L+G Sbjct: 333 VLSGADVVTALCAGADFVLIGRAYLYGLMAGGEQGVSRVIELLEAQIRTTMMLMGAASTA 392 Query: 326 EL 327 +L Sbjct: 393 DL 394 >gi|261492935|ref|ZP_05989480.1| L-lactate dehydrogenase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495078|ref|ZP_05991544.1| L-lactate dehydrogenase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309244|gb|EEY10481.1| L-lactate dehydrogenase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311387|gb|EEY12545.1| L-lactate dehydrogenase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 122/371 (32%), Gaps = 77/371 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN +D L R L ++D +E G+KLS P+ ++ + G M R Sbjct: 31 AEQTLRRNVSDLEDIALRQRVLK--DMSQLDTGIELFGEKLSMPVTLAPV--GALGMYAR 86 Query: 75 INRNLA-IAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AA+ + + + + + L R + + + + Sbjct: 87 RGEVQAGKAADNKGIPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKA 146 Query: 124 ---------------GAVQLNYDFGV--------QKAHQAVHVLGADGLFLHLNPL---- 156 GA + G+ + VH A + +H P Sbjct: 147 AGCSTLVFTVDMPTPGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGN 206 Query: 157 --QEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + +P N+ + + D P+++K + L D + + Sbjct: 207 VSNYMGKPIDLNNYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + + +L +A E + +A Sbjct: 264 RFGADGIIVSNHGGRQLDGV------------------LSSAKALPSIADAVKGEIKILA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+RNG+D+++ + LGA + F+ V ++ KE V+M L Sbjct: 306 DSGIRNGLDVVRMLALGADCTMIGRSFVYALSAAGQAGVENLLDIFLKEMKVAMTLTSNA 365 Query: 323 RVQELYLNTAL 333 ++ ++ + + Sbjct: 366 KISDIGRDALV 376 >gi|332186589|ref|ZP_08388332.1| FMN-dependent dehydrogenase family protein [Sphingomonas sp. S17] gi|332013241|gb|EGI55303.1| FMN-dependent dehydrogenase family protein [Sphingomonas sp. S17] Length = 386 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 116/366 (31%), Gaps = 76/366 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN + L R L +D S G++ + P+ ++ + G R Sbjct: 32 AEVTLRRNITDLEAVALRQRIL--RDVSTIDVSTTLFGRRQALPVALAPV-GLAGMNARR 88 Query: 75 INRNLAIAAEKTKVAMAV--------GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 A AAEK V + G +D + + +R L++ A+ Sbjct: 89 GEVQAARAAEKAGVPFCLSTVSACPLGEVAAAVADPFWFQLYMIRDRGFMRELLAKAKAL 148 Query: 127 Q-----------------------LNYDFGVQKAHQ-----AVHVLGADGLFLHLNPLQ- 157 L + G+ A + +H A + +H P Q Sbjct: 149 GCSALVFTVDMPVPGSRYRDYHSGLAGNPGLTGALRRMWQGVMHPRWAWDVGIHGRPHQL 208 Query: 158 -----EIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + + G +F + + D PL++K + L + D Sbjct: 209 GNVAPVLGKNTGLEDFFAWMRNNFDPTVSWRDLDFIRDTWDGPLIIKGI---LDAEDARA 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG + S I ++ + Sbjct: 266 AAGIGADGIVVSNHGGRQLDGVLSSARALPPIAE-----------------AVGDQLTVL 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGT 321 A GG+R+G+D+++ + LGA L ++ A V ++ + E V+M L G Sbjct: 309 ADGGVRSGLDVVRMLALGAQGVLLGRAWVYALAGGGQAGVSHLLQLVEAEMRVAMALTGA 368 Query: 322 KRVQEL 327 + ++ Sbjct: 369 TDIGQI 374 >gi|325266565|ref|ZP_08133242.1| L-lactate dehydrogenase [Kingella denitrificans ATCC 33394] gi|324982008|gb|EGC17643.1| L-lactate dehydrogenase [Kingella denitrificans ATCC 33394] Length = 391 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 121/373 (32%), Gaps = 78/373 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N + F++ + L + + + + +G+ ++ P+ ++ TG G + Sbjct: 37 ESTYRANSRDFNEIKFRQKVL--VDMEGRSLATKMVGQDVTMPVALAP-TGLTGMQRADG 93 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 I A AAEK V + + + + + A F+L R++ + + + Sbjct: 94 EILA--AKAAEKFGVPFTLSTMSICSIEDVAENTTAPFWFQLYVMRDREFMQNLITRAKE 151 Query: 123 --------------LGAVQLNYDFGVQKAHQ--------------------AVHVLGADG 148 LG + G+ + Sbjct: 152 AKCSALVLTADLQILGQRHKDIKNGLSAPPKPTLLNLLNLLCKPEWCWHMLHTERRTFRN 211 Query: 149 LFLHLNPLQE----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H +Q+ + +A + L++K + +++ D E + Sbjct: 212 IMGHAKNVQDNSSLFSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MTAEDAEKAV 268 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G ++ GG S D+ + ++ + Sbjct: 269 QHGADAIVVSNHGGRQLDGAPSSIRALPDV-----------------VQAAGSQIEVWLD 311 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+ G DIL++ LGA + FL D V A+E L KE +SM G + Sbjct: 312 GGITTGQDILRAWALGARGVMIGRAFLYGLGAYGEDGVRRALEILYKEMDLSMAFTGCRN 371 Query: 324 VQELYLNTALIRH 336 ++E+ L++ Sbjct: 372 IEEVTR-DILVKG 383 >gi|212287938|gb|ACJ23444.1| FI01464p [Drosophila melanogaster] Length = 393 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 116/334 (34%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I+ + + + + A AA K + + Sbjct: 81 DVSRLDISTKIFGEQMQWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 137 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 138 TSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 197 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + IA L + Sbjct: 198 NNFSLPSHLSLANFQGVKATGVGNAAMGASGINEYVSSQFDPTITW--KDIAWLKGITHL 255 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 256 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 302 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + + GG+ G DI K++ LGA + P A + V Sbjct: 303 -------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 355 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F +M L+G + + ++ +A++ H+ Sbjct: 356 MLSVLRKDFETTMALIGCQNLGDI--TSAMVVHE 387 >gi|307704544|ref|ZP_07641451.1| L-lactate oxidase [Streptococcus mitis SK597] gi|307706283|ref|ZP_07643096.1| L-lactate oxidase [Streptococcus mitis SK321] gi|307708449|ref|ZP_07644915.1| L-lactate oxidase [Streptococcus mitis NCTC 12261] gi|307708870|ref|ZP_07645330.1| L-lactate oxidase [Streptococcus mitis SK564] gi|307615548|gb|EFN94755.1| L-lactate oxidase [Streptococcus mitis NCTC 12261] gi|307618316|gb|EFN97470.1| L-lactate oxidase [Streptococcus mitis SK321] gi|307620206|gb|EFN99322.1| L-lactate oxidase [Streptococcus mitis SK564] gi|307621909|gb|EFO00939.1| L-lactate oxidase [Streptococcus mitis SK597] Length = 378 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CNVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGIRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|262372356|ref|ZP_06065635.1| L-lactate oxidase [Acinetobacter junii SH205] gi|262312381|gb|EEY93466.1| L-lactate oxidase [Acinetobacter junii SH205] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 127/378 (33%), Gaps = 80/378 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L E+ + G+ L+ P+ +S + TG + Sbjct: 29 AYAEYTLKRNVEDLSKIALRQRVL--NDMSELSLETQLFGENLALPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLI 120 E A+AA+K + + + + + LR + + + Sbjct: 87 RGEV---QAAVAADKKGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMKNALER 143 Query: 121 SNL---------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 + GA + G+ + A+ + H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGKNAAMRRYMQSCMHPHWAWNVGLLGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + + P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDYWEGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPSIASAVKGDIK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + +GA + L F+ V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLAMGADICMLGRAFVYALGAAGGAGVSNLLDLIEKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIRHQ 337 G + + ++ + L++ + Sbjct: 363 GARTIADI-TSDCLVKLE 379 >gi|307301351|ref|ZP_07581113.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] gi|307318024|ref|ZP_07597461.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306896426|gb|EFN27175.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306903807|gb|EFN34394.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 118/380 (31%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + RN F+ L+ L + +VD SV +G++L+ P+ S Sbjct: 32 ADDEVTYRRNTAAFEGCDLVPNVLRGVG--DVDMSVTVMGQRLAMPVYCSPTALQRLFHH 89 Query: 66 ----------------------GG-NNKMIERI-----------------NRNLAIAAEK 85 G + + RI NR + A++ Sbjct: 90 QGERAVAAAAAKFGTMFGVSSLGTVSLEEARRICDGPQVYQFYFHKDRGLNREMMARAKQ 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V S + + F + P + ++ + + + V Sbjct: 150 AGIEVMMLTVDSITGGNRERDKRTGFAI----PFKLNLAGITQFAIKPSWAVNYVRH--E 203 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGLS 196 L H++ + + + F ++ +A + LK V +S Sbjct: 204 PFRLPQLENHVDMGRGAMS--ISRYFTEMLDPSMSWDDVAEMVQHWGGQFCLKGV---IS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + ++ G ++ GG + D +I + Sbjct: 259 VEDAKRAVEIGCTGIVLSNHGGRQLDGSRTAFDQLDEI-----------------VQAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E +R E Sbjct: 302 DRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQAGVERALELMRVEIERG 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V EL R Sbjct: 362 MKLMGCSSVDELTKENLRFR 381 >gi|68250337|ref|YP_249449.1| L-lactate dehydrogenase [Haemophilus influenzae 86-028NP] gi|81335243|sp|Q4QJK8|LLDD_HAEI8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|68058536|gb|AAX88789.1| L-lactate dehydrogenase [Haemophilus influenzae 86-028NP] gi|309972871|gb|ADO96072.1| L-lactate dehydrogenase, FMN-linked [Haemophilus influenzae R2846] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 VDIK 371 >gi|195123041|ref|XP_002006018.1| GI18775 [Drosophila mojavensis] gi|193911086|gb|EDW09953.1| GI18775 [Drosophila mojavensis] Length = 364 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 111/321 (34%), Gaps = 55/321 (17%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LAIAAEKTKVAMAVGSQRVM 98 VD S + LG++L +P+ I+ KM A AA K + + Sbjct: 54 DVSHVDISCKILGQQLKWPVGIAPTA--MQKMAHPDGETGNARAAGKAGSIFILSTLSTT 111 Query: 99 -FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHVL 144 D + K F+L Y ++ +N A+ L D + H+ V Sbjct: 112 SLEDLSAGAPDTCKWFQLYIYKDRSLTEKLVRRAEKANFKALVLTVDAPI-FGHRRCDVR 170 Query: 145 GADGLFLHL---NPLQEIIQPNGNTNFADL-------------SSKIALLSSAMDVPLLL 188 L HL N ++ + + IA L +P++ Sbjct: 171 NKFSLPSHLKLANFQGDLANGVITMGGSGINEYVASQFDASITWKDIAWLKQLTSLPIIA 230 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + L++ D L + G ++ G + + + ++ Sbjct: 231 KGI---LTAEDAVLAREFGCAGVIVSNHGARQIDTVPASIEALPEV-------------- 273 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIES 307 A+ N+ + GG+ G DI K++ LGA + P + A + V + Sbjct: 274 ---AKAVGNDLVVMLDGGIMQGNDIFKALALGAKTVFIGRPAVYGLAYNGQSGVEQLLSV 330 Query: 308 LRKEFIVSMFLLGTKRVQELY 328 LRK+F ++M L G + + ++ Sbjct: 331 LRKDFEITMSLTGCQTLSDIQ 351 >gi|190891536|ref|YP_001978078.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190696815|gb|ACE90900.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 395 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 120/364 (32%), Gaps = 75/364 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L ++S + GK + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFRPRVLRDVSTR--STATSLFGKTHAVPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFS-----------------DHNAIKSFELRQYAP-- 115 + LA A+++ + M + GS + + + I + R A Sbjct: 104 DIVLAQGADQSGIPMIISGSSLIPLEEIAAASPQAWFQAYLPGEPDRIDALIDRVAAAGI 163 Query: 116 HTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLNPLQ 157 T+L++ A N + V+ + + H P Sbjct: 164 DTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIARHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F S + + L++K + + D Sbjct: 224 ENSYATRGAPIISSNVTRDFGKRDHLNWSHLERIRKRWSGKLVVKGI---MHPEDAARAA 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAA-----------------RVGDSIAVMVD 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG R Sbjct: 324 GGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGLPGVLRAADILKTELYSNMALLGVTR 383 Query: 324 VQEL 327 V ++ Sbjct: 384 VGDI 387 >gi|78707190|ref|NP_001027402.1| CG18003, isoform A [Drosophila melanogaster] gi|281363140|ref|NP_001163115.1| CG18003, isoform C [Drosophila melanogaster] gi|28380895|gb|AAF58735.3| CG18003, isoform A [Drosophila melanogaster] gi|272432433|gb|ACZ94390.1| CG18003, isoform C [Drosophila melanogaster] Length = 400 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 116/334 (34%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I+ + + + + A AA K + + Sbjct: 88 DVSRLDISTKIFGEQMQWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 144 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 145 TSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 204 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + IA L + Sbjct: 205 NNFSLPSHLSLANFQGVKATGVGNAAMGASGINEYVSSQFDPTITW--KDIAWLKGITHL 262 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 263 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 309 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + + GG+ G DI K++ LGA + P A + V Sbjct: 310 -------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 362 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F +M L+G + + ++ +A++ H+ Sbjct: 363 MLSVLRKDFETTMALIGCQNLGDI--TSAMVVHE 394 >gi|323453674|gb|EGB09545.1| hypothetical protein AURANDRAFT_58915 [Aureococcus anophagefferens] Length = 375 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 113/355 (31%), Gaps = 67/355 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE 73 + + N+ F + L RAL P + + + G +L+ P+ S G + + Sbjct: 37 DEATLRDNRAAFGRYALRPRALRP---VEGLSTARTLFGAELNLPVFASP-AGVHALVDG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI----------KSFELR-QYAPHTVLISN 122 R A A + + SQ S + +++ L+ + A ++ Sbjct: 93 AGERATARACGRAGALFGL-SQHATVSIEDVAAAAPKAHRWYQAYLLKDRAATRDLVRRA 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP----LQEIIQPNG-------NTNFADL 171 + A V A F L P + P G Sbjct: 152 VAAGSRGIFLTVDSVRFGFREADARNGFCALPPPLTLANYLATPPGESAAAWETREHRAW 211 Query: 172 -------------SSKIALLSSAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 +A L +D +PL++K V ++ D L + G + Sbjct: 212 DQNSEALFDTAASWDAVAWLREELDDLDRSIPLVVKGV---MTGEDAALAVAHGADGVFV 268 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG D+ ++ + + G+R G D+ Sbjct: 269 STHGGRQLDETLGSLDVLPEV-----------------VAAVPSGTPVLLDSGVRRGTDV 311 Query: 274 LKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +K++ LGA+ G+ P F A+ V + L +E V+M L G + ++ Sbjct: 312 VKALALGATAVGVGKPLFFSLAVGGERGVDKLFDILEEELRVAMALTGCASLDDI 366 >gi|270292251|ref|ZP_06198465.1| lactate 2-monooxygenase [Streptococcus sp. M143] gi|270279297|gb|EFA25140.1| lactate 2-monooxygenase [Streptococcus sp. M143] Length = 378 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|322374675|ref|ZP_08049189.1| L-lactate oxidase [Streptococcus sp. C300] gi|321280175|gb|EFX57214.1| L-lactate oxidase [Streptococcus sp. C300] Length = 378 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAAYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|33322379|gb|AAQ06914.1|AF496246_1 UPF0037 protein [Lactobacillus delbrueckii subsp. lactis] Length = 123 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 7/128 (5%) Query: 24 KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD HL+ ALPE + + GK+L+ P I++MTGG+ K +INR L A Sbjct: 2 NSFDQVHLLRPALPESQVNLNAVKTTWFGKELAAPFFINAMTGGSEK-SRQINRQLGEIA 60 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 K ++A+A+GS ++ + + ++SF + R+ P +L +N+ + A + V Sbjct: 61 NKQQIALALGSASILTKEEDQLESFYVAREANPDGLLFANVNPLT-----PAXAAAKIVK 115 Query: 143 VLGADGLF 150 L AB L Sbjct: 116 DLQABALQ 123 >gi|116192565|ref|XP_001222095.1| hypothetical protein CHGG_06000 [Chaetomium globosum CBS 148.51] gi|88181913|gb|EAQ89381.1| hypothetical protein CHGG_06000 [Chaetomium globosum CBS 148.51] Length = 509 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 105/330 (31%), Gaps = 62/330 (18%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLIS--SMT-GGNNKMIERINRNLAIAAEKTKV---AMAV 92 + + S LG ++S PL +S +M + I R ++ V A Sbjct: 167 VDVTRANTSTTLLGHRVSTPLYVSPAAMARLAHPDGEAGIARGISRFGALQLVSHNASMS 226 Query: 93 GSQRVMFSDHNAIKSFELR---QYAPHTVLISNL-------GAVQLNYDFGVQKAHQAVH 142 Q V + + ++L A +++ + V L D V + Sbjct: 227 PEQIVADAAPGQLFGWQLYVQTNRAKSEAMLARIARMPDRYKCVVLTLDAPVPSKREHDE 286 Query: 143 VLGADGLFL------HLNPLQ--EIIQPNGNTNFAD------LSSKIALLSSAMDVPLLL 188 + + + Q ++ G F + + L +P++L Sbjct: 287 RAALEARLVMEAARPPVGAGQKPDVDAGVGKKLFFGTAADLTWETTLPWLVKHTTLPIVL 346 Query: 189 KEVGCGLSSMDIELGLKSG------IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 K + + D L + ++ ++ GG S Sbjct: 347 KGIQ---THEDAFLAARYARKHPGTVKAIILSNHGGRSLDTSP----------------- 386 Query: 243 IPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 P +L R YC E + GG+R G DI+K++ LGA G+ L Sbjct: 387 -PAVHTLLEIRKYCPEVFDTIEVWVDGGVRRGTDIVKALCLGAKAVGVGRAALWGLGAGG 445 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V E L+ E M ++G K + EL Sbjct: 446 WKGVDRTFEILQGEIETCMKMMGAKDLSEL 475 >gi|330899804|gb|EGH31223.1| L-lactate dehydrogenase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 380 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D V G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRANGSDLADISLRQRVLK--NVDNVSLETRLFGETLAMPIVLSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA ++ + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQAAKAAANKRIPFCLSTVSVCSIEEVASQSKQAIWFQLYVLKDRGFMKNALERAR 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 L G ++ GG + + T +L + + ++ Sbjct: 261 DALSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIVQAVGSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L D V ++ +E V+M L Sbjct: 303 VLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLT 362 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 363 GVTSIEQI 370 >gi|306825638|ref|ZP_07458977.1| L-lactate oxidase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431999|gb|EFM34976.1| L-lactate oxidase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 378 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 109/347 (31%), Gaps = 60/347 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAAYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + P + A+ S V E L E M L GT+ ++++ Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKR 356 >gi|195120860|ref|XP_002004939.1| GI19331 [Drosophila mojavensis] gi|193910007|gb|EDW08874.1| GI19331 [Drosophila mojavensis] Length = 366 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 112/332 (33%), Gaps = 60/332 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQR- 96 +D S E LG +L++PL I+ + + + + A AA + + + Sbjct: 54 DVSHLDISCEILGAQLAWPLGIAPTA---MQKLAHPDGEIGTARAAGQAGSIFILSTLST 110 Query: 97 -----VMFSDHNAIKSFEL-----RQYAPHTVLISNL---GAVQLNYDFGVQKAHQAVHV 143 V + K F+L R + + L A L D +A Sbjct: 111 CSIEEVAEAAPETCKWFQLYIYKERSLTQQLIRRAELAGFKAFVLTVDMPTSGDRRA-DA 169 Query: 144 LGADGLFLHL---NPLQEIIQ--------------PNGNTNFADLSSKIALLSSAMDVPL 186 HL N ++ Q + + I L +P+ Sbjct: 170 RNDFKFPSHLSLANFQDDLTQRFASKCAGSGLTAYVTSQYDSSITWQDIKWLQQLTQLPI 229 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + L++ D +L +G ++ GG + + D +I Sbjct: 230 VLKGI---LTAEDAQLARDAGCAGIIVSNHGGRQLDTVPATIDALPEI------------ 274 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAI 305 + + GG+ G+DI K++ LGA + P L A D V + Sbjct: 275 -----VAAVGKDLVVMLDGGIMQGIDIFKALALGAQTVFIGRPALWGLATDGQRGVEQLL 329 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LR +F +M L G + ++ +++ H+ Sbjct: 330 KILRHDFDTTMKLTGCASLS--HIQPSMVVHE 359 >gi|295690113|ref|YP_003593806.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caulobacter segnis ATCC 21756] gi|295432016|gb|ADG11188.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caulobacter segnis ATCC 21756] Length = 380 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 118/371 (31%), Gaps = 79/371 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L ++S DPS G K + P+ ++ + G Sbjct: 29 AYAERTLGRNVSDLADIALRQRVLKDVSAG--DPSTTLFGVKQALPVALAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA K V + + V D + S F+L R + ++ + Sbjct: 86 RRGECQAARAAAKKGVPFCLSTVSVCDVDEVSKASSAPIWFQLYVLRDRAFMRDLLIRAR 145 Query: 123 L-GAVQL--NYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 GA L D V A + G + + Q + +P Sbjct: 146 EAGATALVFTVDMPVPGARYRDAHSGMSGPNAAARRI--AQAMFKPAWAWDVGVMGRPHT 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G +F + + PL++K V L D + Sbjct: 204 LGNVAPVLGENSGLEDFMGWLGANFDPSIQWKDLEWIRDLWKGPLIIKGV---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 G ++ GG + + + +L +A + Sbjct: 261 AAADIGADGVVVSNHGGRQLDGV------------------LSSARALPAIADAVGDRLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L + A V ++ + KE V+M L Sbjct: 303 VLADSGVRSGLDVVRMLALGAKGVLLGRAAVYALAARGEAGVTQLLDLIEKEMRVAMALT 362 Query: 320 GTKRVQELYLN 330 G + V + + Sbjct: 363 GVRDVASIDRS 373 >gi|114762463|ref|ZP_01441907.1| L-lactate dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114544718|gb|EAU47723.1| L-lactate dehydrogenase [Roseovarius sp. HTCC2601] Length = 380 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 115/377 (30%), Gaps = 79/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F + L R L VD ++E G+ S P I TG N Sbjct: 30 AESEVTLRHNRSSFTNIVLTPRILKG---GSVDLTLELFGETYSKPFFIGP-TGLNGLYW 85 Query: 73 ERINRNLAIAAEKTKV----------------------------AMAVGSQRVMFSDHNA 104 + + +LA AAE+ V G+ D Sbjct: 86 PQGDLHLAAAAERAGVGFTVSTASNTTLEEIARRSKGPLWFQLYPWGKGAFADALIDRAQ 145 Query: 105 IKSFE-----------------LR-------QYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + LR + P TVL L L + + Sbjct: 146 AAGYSALVLTVDSLVGGKRERDLRHGFAHEIRIGPRTVLDGLLHPAWLTSVWLGPHRPRL 205 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 ++L G L E + N F+ + + PLL+K + + D Sbjct: 206 ENLLDFVGNSASDRELAEFTRSQRNPEFSWGD--VRRIREKWKGPLLIKGI---MCPEDA 260 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 ++G+ ++ GG + D+ +DI + Sbjct: 261 IDAQRAGVDGIVVSNHGGRQLDGAPATIDVLADIIAALD-----------------RKFP 303 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G DI+K++ LGA L L A V A+ L +E +M + Sbjct: 304 VLLDGGIRRGSDIVKALALGAKGILLGRAPLYGLAAQGEAGVSRALSILEEEMTRTMTFV 363 Query: 320 GTKRVQELYLNTALIRH 336 G + V + IR Sbjct: 364 GARSVSAVSDFNVEIRR 380 >gi|167045730|gb|ABZ10377.1| putative FMN-dependent dehydrogenase [uncultured marine bacterium HF4000_APKG2098] Length = 384 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 114/377 (30%), Gaps = 84/377 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP---------------- 58 + + RN F+ LI L +D S LG+K+ FP Sbjct: 34 DEVTLKRNTDSFNKCDLIPDVL--TGASNIDLSTTVLGQKIDFPLFLAATAMHRLYHHHG 91 Query: 59 --------------LLISSMTGGNNKMIERIN-----------------RNLAIAAEKTK 87 IS+M + + I ++ NL + K Sbjct: 92 ERATARAAEKMGTMFGISTMATTSLEEIGKLTSGPKLFQLYIHKDKGLTDNLIERSRKAG 151 Query: 88 V---AMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + V + + + F R + + + N+ F + + Sbjct: 152 FNSMCLTVDAAVAGNRERDRRTGFTTPPRLTFESLLSFALHPSWTFNHFFSEKFILANII 211 Query: 143 VLGADGLFLH---LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + G + ++ + E P N + P LK V +S D Sbjct: 212 HMTKKGTSIDKSVIDYINEQFDPAMN------WKDAEYCVKKWNGPFALKGV---MSVED 262 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + + G I+ GG + D ++I ++ Sbjct: 263 AKKAIDIGCTAIMISNHGGRQLDGSRAPFDQLAEI-----------------VDAVGDKI 305 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFL 318 + I GG+R G +LK++ LGA +L + A ++ ++ E M L Sbjct: 306 EVILDGGVRRGTHVLKALALGAKACSFGKAYLFALGAAGQQGIEALLQKMKAEINRDMIL 365 Query: 319 LGTKRVQELYLNTALIR 335 +G K V++L + + R Sbjct: 366 MGCKSVKDLNRSKVVFR 382 >gi|2385388|emb|CAA04759.1| L-mandelate dehydrogenase [Rhodotorula graminis] Length = 491 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 123/367 (33%), Gaps = 87/367 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG----GN 68 + + ++ + R L ++ +D + FLG P+ ++ G G+ Sbjct: 146 AETEQTLRDEREAWQRVRFRPRVLRKMR--HIDTNTTFLGIPTPLPIFVAP-AGLARLGH 202 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + I R +A K + V S + + FE+++ + ++ V Sbjct: 203 PDGEQNIVRGVA----KHDILQVVSSGAS----CSIDEIFEVKEPDQN---LAWQFYVHS 251 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNP--------------------------------- 155 + +K +A+ LGA +F+ ++ Sbjct: 252 DKKIAEEKLKRAL-ALGAKAIFVTVDVPVLGKRERDLKLKARSQNYEHPIAAQWKAAGSK 310 Query: 156 LQEIIQPNGNTNFADL--------SSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKS 206 ++E I G ++ D IA + VP+++K VGC D+EL + Sbjct: 311 VEETIAKRGVSDIPDTAHIDANLNWDDIAWIKERAPGVPIVIKGVGC---VEDVELAKQY 367 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFI 262 G ++ G + D+ L R E + Sbjct: 368 GADGVVLSTHGARQLDGARAPLDV------------------LIEVRRKNPALLKEIEVY 409 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G R G D+LK++ LGA G FL + +D V AI L E +M LLG Sbjct: 410 VDGQARRGTDVLKALCLGARGVGFGRGFLYAQSAYGADGVDKAIRILENEIQNAMRLLGA 469 Query: 322 KRVQELY 328 + +L Sbjct: 470 NTLADLK 476 >gi|195333261|ref|XP_002033310.1| GM21244 [Drosophila sechellia] gi|194125280|gb|EDW47323.1| GM21244 [Drosophila sechellia] Length = 366 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 118/334 (35%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISTKIFGEQMQWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + IA L S + Sbjct: 171 NNFSLPSHLTLANFQGVKATGVGNAAVGASGINEYVSSQFDPTITW--RDIAWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 229 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + L+K+F ++M L+G + + ++ +A++ H+ Sbjct: 329 MLSVLKKDFEITMALIGCQSLGDI--TSAMVVHE 360 >gi|71066209|ref|YP_264936.1| L-lactate dehydrogenase (cytochrome) [Psychrobacter arcticus 273-4] gi|71039194|gb|AAZ19502.1| L-lactate dehydrogenase (cytochrome) [Psychrobacter arcticus 273-4] Length = 402 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 124/372 (33%), Gaps = 73/372 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N+ FD L R L ++ + + E LG + P+ I+ TG M Sbjct: 36 ETTYRNNETDFDRIKLRQRVL--VNMEGRSLATEMLGTPVKMPVAIAP-TGFTGMMWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFELRQYAPHTVLISNL------- 123 A AAEK V ++ + + + + F+L I+NL Sbjct: 93 EILAAQAAEKFGVPFSLSTMSICSIEDVAEHTSQPFWFQL-YMMRDMDFIANLIRRAKEA 151 Query: 124 --GAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL 171 A+ L D V Q+ + L A N L + +P F ++ Sbjct: 152 NCSALILTADLQVLGQRHKDIKNGLSAPPKPTLANILNLMTKPEWCMNMLGTKRRTFGNI 211 Query: 172 --------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 +A + L++K + + D L + Sbjct: 212 VGHAKNVEDISSLSAWTAEQFDPALSWDDVARIKDMWGGKLIIKGI---MEPEDAVLAAR 268 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 SG ++ GG S +DI ++ R ++ + Sbjct: 269 SGADALVVSNHGGRQLDGAPSSISSLADI--------------VQAVRAEDSQIEIWLDS 314 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ LGA+ + FL D V A+E + E +SM G + Sbjct: 315 GIRSGQDVLKAMALGANGTMIGRAFLYGLGAYGEDGVRRALELIYNECDISMAFCGHTDI 374 Query: 325 QELYLNTALIRH 336 E+ + L++ Sbjct: 375 NEVR-DDILVKG 385 >gi|262281393|ref|ZP_06059174.1| L-lactate dehydrogenase [Acinetobacter calcoaceticus RUH2202] gi|262257219|gb|EEY75956.1| L-lactate dehydrogenase [Acinetobacter calcoaceticus RUH2202] Length = 381 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYSEHTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAISRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSMFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NADCLVQ 377 >gi|237728907|ref|ZP_04559388.1| L-lactate dehydrogenase [Citrobacter sp. 30_2] gi|226909529|gb|EEH95447.1| L-lactate dehydrogenase [Citrobacter sp. 30_2] Length = 396 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLTGAKSISEISR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|182683633|ref|YP_001835380.1| lactate oxidase [Streptococcus pneumoniae CGSP14] gi|221231517|ref|YP_002510669.1| L-lactate oxidase [Streptococcus pneumoniae ATCC 700669] gi|225854226|ref|YP_002735738.1| L-lactate oxidase [Streptococcus pneumoniae JJA] gi|182628967|gb|ACB89915.1| lactate oxidase [Streptococcus pneumoniae CGSP14] gi|220673977|emb|CAR68487.1| L-lactate oxidase [Streptococcus pneumoniae ATCC 700669] gi|225723821|gb|ACO19674.1| L-lactate oxidase [Streptococcus pneumoniae JJA] Length = 378 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|15964207|ref|NP_384560.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15073383|emb|CAC41891.1| Putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] Length = 403 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 118/380 (31%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + RN F+ L+ L + +VD SV +G++L+ P+ S Sbjct: 54 ADDEVTYRRNTAAFEGCDLVPNVLRGVG--DVDMSVTVMGQRLAMPVYCSPTALQRLFHH 111 Query: 66 ----------------------GG-NNKMIERI-----------------NRNLAIAAEK 85 G + + RI NR + A++ Sbjct: 112 QGERAVAAAAAKFGTMFGVSSLGTVSLEEARRICDGPQVYQFYFHKDRGLNREMMARAKQ 171 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V S + + F + P + ++ + + + V Sbjct: 172 AGIEVMMLTVDSITGGNRERDKRTGFAI----PFKLNLAGITQFAIKPSWAVNYVRH--E 225 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGLS 196 L H++ + + + F ++ +A + LK V +S Sbjct: 226 PFRLPQLENHVDMGRGAMS--ISRYFTEMLDPSMSWDDVAEMVQHWGGQFCLKGV---IS 280 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + ++ G ++ GG + D +I + Sbjct: 281 VEDAKRAVEIGCTGIVLSNHGGRQLDGSRTAFDQLDEI-----------------VQAVG 323 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E +R E Sbjct: 324 DRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQAGVERALELMRVEIERG 383 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V EL R Sbjct: 384 MKLMGCSSVDELTKENLRFR 403 >gi|302500228|ref|XP_003012108.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] gi|291175664|gb|EFE31468.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] Length = 512 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 126/374 (33%), Gaps = 86/374 (22%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R + + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVM--RNVREVNTKSSILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A + + Sbjct: 198 ELGIARACQSRGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAAQLRECSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLTLPMVPAK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 313 IDPGLTWEDVKWARQHTHLPLLLKGVQ---SADDAVMAMEAGIDGIMLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ + + G+R G D+LK+I LGA+ G Sbjct: 370 ASIIVLLELH--------------RRCPEVFDRMEIYIDSGIRRGTDVLKAICLGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIES--------------------LRKEFIVSMFLLGTKRVQ 325 + FL + + I+S +R E +M +G + Sbjct: 416 MGRSFLFASNYGQEGAEHLIDSMYYLFSYIFFFFHPPFWPVVMRDELEGAMRNIGITSLH 475 Query: 326 EL---YLNTALIRH 336 + Y+NTA I H Sbjct: 476 QAGPQYINTADIDH 489 >gi|156935947|ref|YP_001439863.1| L-lactate dehydrogenase [Cronobacter sakazakii ATCC BAA-894] gi|259494983|sp|A7MNF6|LLDD_ENTS8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|156534201|gb|ABU79027.1| hypothetical protein ESA_03841 [Cronobacter sakazakii ATCC BAA-894] Length = 401 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K ++E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGEKGVANLLNLIEKEMRVAMTLTGAKSIKEITR 372 Query: 330 NTAL 333 + + Sbjct: 373 ESLV 376 >gi|134284627|gb|ABI54451.2| lactate oxidase [Streptococcus oligofermentans] Length = 378 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A V ++ S F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISQALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYTAIVLPADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAQYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|315612798|ref|ZP_07887709.1| L-lactate oxidase [Streptococcus sanguinis ATCC 49296] gi|315314908|gb|EFU62949.1| L-lactate oxidase [Streptococcus sanguinis ATCC 49296] Length = 378 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPASFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|289678462|ref|ZP_06499352.1| L-lactate dehydrogenase [Pseudomonas syringae pv. syringae FF5] Length = 380 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D V G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRANGSDLADISLRQRVLK--NVDNVSLETRLFGESLAMPIVLSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA ++ + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQAAKAAANKRIPFCLSTVSVCSIEEVASQSKQAIWFQLYVLKDRGFMKNALERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 L G ++ GG + + T +L + + ++ Sbjct: 261 DALSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIVQAVGSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L D V ++ +E V+M L Sbjct: 303 VLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLT 362 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 363 GVTSIEQI 370 >gi|330972767|gb|EGH72833.1| L-lactate dehydrogenase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 380 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D V G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRANGSDLADISLRQRVLK--NVDNVSLETRLFGESLAMPIILSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA ++ + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQAARAAANKRIPFCLSTVSVCSIEEVASQSKQAIWFQLYVLKDRGFMKNALERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIRELWQGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 L G ++ GG + + T +L + + ++ Sbjct: 261 DALSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIVQAVGSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L D V ++ +E V+M L Sbjct: 303 VLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLT 362 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 363 GVTSIEQI 370 >gi|319898392|ref|YP_004158485.1| L-lactate dehydrogenase [Bartonella clarridgeiae 73] gi|319402356|emb|CBI75895.1| L-lactate dehydrogenase [Bartonella clarridgeiae 73] Length = 383 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 113/371 (30%), Gaps = 73/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L +I +VD S E LG+KL P++++ + TG + Sbjct: 29 AYAEETMRRNCTDLQELALRQRILKQIG--DVDLSTEILGQKLGMPIVLAPVGLTGMYAR 86 Query: 71 MIE----------------------RINRNLAIAAEKTKVAMAV----GSQRVMFSDHNA 104 E I+ A ++ + V G R A Sbjct: 87 RGEVKAARAAVAKGIPFTLSSVSVCPISEVQAAVGKEFWFQLYVLKDRGFMRDALERSWA 146 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA------DGLFLH----LN 154 L V + + V + G+ H N Sbjct: 147 AGVRTLVFTVDMPVPGARYRDAHSGMSGPYAGLRRIVQAVFHPHWAWNVGIMGHPHDLGN 206 Query: 155 PLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + ++ + + ++LK + L D + Sbjct: 207 VSAYLKKKTTLKDYIGWLGANFDPSISWGDLQWIRDFWKGKMILKGI---LDPEDAREAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L ++A + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTARALPKIADVIKGDLTILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G+D+++ I GA + F+ A V +E +E V+M L G + Sbjct: 306 DSGIRSGLDVVRMIAQGADAVMIGRAFIYALAAAGEKGVTYLLELFAQEMRVAMTLTGVR 365 Query: 323 RVQELYLNTAL 333 ++E+ + Sbjct: 366 TIKEITRENLV 376 >gi|293365032|ref|ZP_06611749.1| lactate 2-monooxygenase [Streptococcus oralis ATCC 35037] gi|307702257|ref|ZP_07639217.1| L-lactate oxidase [Streptococcus oralis ATCC 35037] gi|291316482|gb|EFE56918.1| lactate 2-monooxygenase [Streptococcus oralis ATCC 35037] gi|307624270|gb|EFO03247.1| L-lactate oxidase [Streptococcus oralis ATCC 35037] Length = 378 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAAYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPASFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|213514408|ref|NP_001135240.1| Hydroxyacid oxidase 1 [Salmo salar] gi|209155060|gb|ACI33762.1| Hydroxyacid oxidase 1 [Salmo salar] Length = 379 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 IA L +P+++K V L + D L G+ ++ G + + D+ Sbjct: 228 CWEHIAWLKKNTHLPVVVKGV---LRAEDALEALIHGVDGILVSNHGARQLDGVPATLDV 284 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 S++ + GG+R G D+LK++ LGA+ L P Sbjct: 285 LSEV-----------------VSAVAGRCEVYLDGGVRRGTDVLKALALGATAVFLGRPV 327 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L A V +E +R E ++M L G V E +N +L+R Sbjct: 328 LWGLACQGEQGVSDVLELMRDELHLAMALAGCCSVAE--VNRSLVRR 372 >gi|319638129|ref|ZP_07992892.1| L-lactate dehydrogenase [Neisseria mucosa C102] gi|317400402|gb|EFV81060.1| L-lactate dehydrogenase [Neisseria mucosa C102] Length = 390 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 119/366 (32%), Gaps = 83/366 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLIS-- 121 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGN---TN 167 N A+ L D V + + A+ + L P E N Sbjct: 152 ANCSALVLTADLQV-LGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRT 208 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F ++ +A + L++K + + D E Sbjct: 209 FRNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAE 265 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 KSG ++ GG S D+ ++ + Sbjct: 266 KAAKSGADALVVSNHGGRQLDDTVSAIKALPDV-----------------VSAVGSDIEV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 309 WMDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTG 368 Query: 321 TKRVQE 326 + +Q+ Sbjct: 369 HRNIQD 374 >gi|293401177|ref|ZP_06645321.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305303|gb|EFE46548.1| dehydrogenase, FMN-dependent family [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 342 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 40/303 (13%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-----NRNLAIAAEKTK-VAMAVGSQ 95 +E+D + +F G ++ P+ + ++G ++ R L + +A Sbjct: 68 EEIDTASDFFGHPVALPVYAAPISGIEQNYGAKMRDDDYTRELVEGCLQANTLAFTGDGM 127 Query: 96 RV-MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 MF I ++Q+ + I + Q + ++ + + A + ++ Sbjct: 128 HDEMFKGPMEI----VKQHNGYG--IPTIKPWQYEH---MKWRIELANEGNALAIASDID 178 Query: 155 P--LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 L + F + + + + VP +LK + LS L +G Sbjct: 179 ASGLSNLRNSVTPVGFKSVED-LKEIKAMCKVPFILKGI---LSVAGTRKALAAGADGII 234 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S ++ +I + G R+G D Sbjct: 235 VSNHGGRVLDDSPSGIEMLEEI-----------------VNVVDGRMKVFVDGAFRSGND 277 Query: 273 ILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + K++ LGA + P + + ++ + +E ++ E +M + G K +Q++ + Sbjct: 278 VFKALALGADGVLIGRPASQAVIGGMAEGIRIYMEKIQLELKEAMAMSGCKSIQDITRDK 337 Query: 332 ALI 334 ++ Sbjct: 338 VIV 340 >gi|310815224|ref|YP_003963188.1| Lactate dehydrogenase [Ketogulonicigenium vulgare Y25] gi|308753959|gb|ADO41888.1| Lactate dehydrogenase [Ketogulonicigenium vulgare Y25] Length = 387 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 118/372 (31%), Gaps = 79/372 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F D L R + LG+ +S P+ +S + TG + E Sbjct: 33 EQTFQDNTSDFADIRLRQRV--AVDMSNRSLKTTMLGRDVSMPVALSPVGLTGMQSADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQ--------RVMFSDHNAIKSFELRQYA--PHTVLIS-N 122 A AA K V + + R + + + +R A + + + N Sbjct: 91 I---KAARAAAKFGVPYTLSTMSICSIEDVRAHSKEPFWFQLYVMRDEAFVDNIIQRAKN 147 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII------------QPNG-NTNFA 169 G L +Q Q L +GL P + F Sbjct: 148 AGVSALVLTLDLQILGQRHKDLK-NGLSTPPKPTLRTMADLALRWRWCAQMAKTQRRTFR 206 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ KIA + L+LK + L + D + Sbjct: 207 NIVGHAPSVGNLSSLSSWTAEQFDPQLDWGKIARIREKWGGKLILKGI---LDAEDAVMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G ++ GG S + I R + + Sbjct: 264 ADAGADAIVVSNHGGRQLDGALSSIRILPSI-----------------VRAVGDRTEVWL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+LK++ LGA + ++ + V A++ +R+E V+M L+G + Sbjct: 307 DSGIRSGQDVLKALALGAKATMIGRSYIYGLGAYGEEGVTMALDIIRRELDVTMALVGKR 366 Query: 323 RVQELYLNTALI 334 V++L + L+ Sbjct: 367 DVRDLNRDVLLV 378 >gi|169797722|ref|YP_001715515.1| L-lactate dehydrogenase [Acinetobacter baumannii AYE] gi|184156415|ref|YP_001844754.1| L-lactate dehydrogenase [Acinetobacter baumannii ACICU] gi|213155487|ref|YP_002317532.1| L-lactate dehydrogenase (cytochrome) [Acinetobacter baumannii AB0057] gi|215485074|ref|YP_002327315.1| L-lactate dehydrogenase (cytochrome) [Acinetobacter baumannii AB307-0294] gi|260557671|ref|ZP_05829885.1| L-lactate oxidase [Acinetobacter baumannii ATCC 19606] gi|301346085|ref|ZP_07226826.1| L-lactate dehydrogenase [Acinetobacter baumannii AB056] gi|301511327|ref|ZP_07236564.1| L-lactate dehydrogenase [Acinetobacter baumannii AB058] gi|301594185|ref|ZP_07239193.1| L-lactate dehydrogenase [Acinetobacter baumannii AB059] gi|259494958|sp|B7H2H0|LLDD_ACIB3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494959|sp|B7IBS4|LLDD_ACIB5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494960|sp|B2I061|LLDD_ACIBC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494962|sp|B0V6L1|LLDD_ACIBY RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494988|sp|A3M0X0|LLDD_ACIBT RecName: Full=L-lactate dehydrogenase [cytochrome] gi|169150649|emb|CAM88558.1| L-lactate dehydrogenase, FMN linked [Acinetobacter baumannii AYE] gi|183208009|gb|ACC55407.1| L-lactate dehydrogenase (FMN-dependent) [Acinetobacter baumannii ACICU] gi|193075983|gb|ABO10564.2| L-lactate dehydrogenase FMN linked [Acinetobacter baumannii ATCC 17978] gi|213054647|gb|ACJ39549.1| L-lactate dehydrogenase (cytochrome) [Acinetobacter baumannii AB0057] gi|213987991|gb|ACJ58290.1| L-lactate dehydrogenase (cytochrome) [Acinetobacter baumannii AB307-0294] gi|260408844|gb|EEX02148.1| L-lactate oxidase [Acinetobacter baumannii ATCC 19606] gi|322506287|gb|ADX01741.1| lldD [Acinetobacter baumannii 1656-2] Length = 383 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 123/376 (32%), Gaps = 80/376 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + + LS P+ ++ + TG + Sbjct: 29 AYAEYTLKRNVQDLSEIALRQRVL--NDMSALSLETKLFNETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A+AA+K + + + V + A F+L + + L Sbjct: 87 RGEV---QAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALER 143 Query: 124 ------------------GAVQLNYDFGVQKAHQAVHVLGADGLFLH------------- 152 GA + G+ + A+ H Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P G ++ + + D P+++K + L D + Sbjct: 204 LGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 303 ILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTALIR 335 G K + ++ L++ Sbjct: 363 GAKSISDI-NADCLVQ 377 >gi|302695769|ref|XP_003037563.1| hypothetical protein SCHCODRAFT_81005 [Schizophyllum commune H4-8] gi|300111260|gb|EFJ02661.1| hypothetical protein SCHCODRAFT_81005 [Schizophyllum commune H4-8] Length = 496 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 108/328 (32%), Gaps = 59/328 (17%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIA--AEKTKVAMAVGS-------Q 95 DPS LG K S P+ +S G + + L I + V S + Sbjct: 181 DPSTTILGFKSSIPVFVS---GAAMAKLAHPDGELNITRGCAAQGIIQMVSSNASYSYAE 237 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNL--------GAVQLNYDFGVQKAHQA------- 140 + F+L ++ + + + A+ L D V + Sbjct: 238 IAHAATPTQPLFFQLYKHKDDALALQRIREVEALGYKALFLTVDAVVPSKREFDIRAPWY 297 Query: 141 VHVLG----ADGLFLHLNPLQE-------IIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + L + + + LQ + N + + I L S +P++LK Sbjct: 298 LEELERGGPMEFVEEQADALQGQSFGTAGGLIVNDDRDMT-WERTIPWLRSVTRLPIVLK 356 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + C D L ++G+ I+ GG ++ + + Sbjct: 357 GIQC---VEDALLAAEAGVDGILISNHGGRQLDYSLPPIEVLYRLRKHHPE--------- 404 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESL 308 + + GG+ G D+LK++ LGA+ GL P+L V L Sbjct: 405 -----VFGKMEIYIDGGITRGSDVLKAVCLGATAVGLGRPYLYAQGAYGVAGVKRITHIL 459 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 E + +M L+G R+++L L+ Sbjct: 460 ETEIVTAMRLMGASRIKDL--TPELVER 485 >gi|149005822|ref|ZP_01829561.1| lactate oxidase [Streptococcus pneumoniae SP18-BS74] gi|147762762|gb|EDK69722.1| lactate oxidase [Streptococcus pneumoniae SP18-BS74] Length = 378 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|308185832|ref|YP_003929963.1| L-lactate dehydrogenase [Pantoea vagans C9-1] gi|308056342|gb|ADO08514.1| L-lactate dehydrogenase [Pantoea vagans C9-1] Length = 395 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L F+ A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAFIYALATHGQRGVENLLNLIEKEMRVAMTLTGAKSISEITR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|223997212|ref|XP_002288279.1| l-lactate dehydrogenase [Thalassiosira pseudonana CCMP1335] gi|220975387|gb|EED93715.1| l-lactate dehydrogenase [Thalassiosira pseudonana CCMP1335] Length = 431 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 116/374 (31%), Gaps = 73/374 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R K + + + L + +D S + G+ + P T GN Sbjct: 60 ADDEISLRRGKDAYSELEMHFHILSGLKPP-LDLSTKIFGQDVKLPFFGCP-TAGNRMFH 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------QRVMFSDHN---AIKSFELRQYAPHTVLISN 122 A AA+ + S + +D + ++ R+ + + Sbjct: 118 WEGETAAAKAAQHHGTLYGLSSLATTGITEIGKLTDGPKVFQLYVWKDRELVKEVLAKAK 177 Query: 123 LGAVQ-----------------------LNYDFGVQKAHQAVHVLG--ADGLF------- 150 G + + + + +A+ D L Sbjct: 178 EGGFNAMALTVDFTWYGNRERDIRNDFSIPPKYSMAQIVEAIRKPAWTYDFLSHEPYTYA 237 Query: 151 -----LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + L + F D L ++P +K V D ++ Sbjct: 238 CINTDVPADSLAAFVNSQLCPEF-DWRDA-EWLLGEWNMPSAVKGVCR---PDDAIKAVE 292 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G ++ G + D+ S+ A + + I G Sbjct: 293 TGFTTMWVSNHGARQLETSPATIDVLP---------------SIREA--VGPDVEIILDG 335 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G++ G DI K++ LGA G+ P+L A ++ V+ A + L+ E +M LLG V Sbjct: 336 GVQRGTDICKALALGADSVGVGKPYLYGLAAGGTEGVIKAYDILKVELDRAMGLLGAGTV 395 Query: 325 QELYLN-TALIRHQ 337 EL LI+ + Sbjct: 396 DELKKRGPGLIKRR 409 >gi|15900612|ref|NP_345216.1| lactate oxidase [Streptococcus pneumoniae TIGR4] gi|14972189|gb|AAK74856.1| lactate oxidase [Streptococcus pneumoniae TIGR4] Length = 378 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CNVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|107025690|ref|YP_623201.1| (S)-2-hydroxy-acid oxidase [Burkholderia cenocepacia AU 1054] gi|116693128|ref|YP_838661.1| (S)-2-hydroxy-acid oxidase [Burkholderia cenocepacia HI2424] gi|170737609|ref|YP_001778869.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia cenocepacia MC0-3] gi|105895064|gb|ABF78228.1| (S)-2-hydroxy-acid oxidase [Burkholderia cenocepacia AU 1054] gi|116651128|gb|ABK11768.1| (S)-2-hydroxy-acid oxidase [Burkholderia cenocepacia HI2424] gi|169819797|gb|ACA94379.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia cenocepacia MC0-3] Length = 381 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 112/380 (29%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + RN F+ L+ L +VD SV +G+KL P+ S Sbjct: 32 ADDETTYRRNTSAFESCDLVPNVLRG--VRDVDLSVTVMGQKLGMPVYCSPTALQRLFHH 89 Query: 66 ----------------------GG-NNKMIERI-----------------NRNLAIAAEK 85 G + + I NR + + + Sbjct: 90 DGERAVAAAAAKFDTMFGVSSLGTVSLEEARAISPGPQVYQFYFHKDRGLNREMMNRSRE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V + V S + + F + P + ++ L L + V Sbjct: 150 AGVNVMMLTVDSITGGNRERDKRTGFSI----PFRLTLAGLTEFALKPAWAVNYLTH--E 203 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGLS 196 L H++ + + F D+ +A + + LK V +S Sbjct: 204 RFRLPQLDRHVDMGGGAMS--ISRYFTDMLDPSMSWDDVAAMVREWNGQFCLKGV---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D G ++ GG + D +++ Sbjct: 259 VDDARRAADIGCTGIVLSNHGGRQLDGSRAAFDQLAEV-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A++ +R E Sbjct: 302 DRIDVMMDGGVQRGSHVLKALALGAKAVGLGRYYLFPLAAAGQPGVERALQLMRTEIERD 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V +L N R Sbjct: 362 MRLMGCASVAQLGRNQLRFR 381 >gi|317486882|ref|ZP_07945693.1| FMN-dependent dehydrogenase [Bilophila wadsworthia 3_1_6] gi|316921872|gb|EFV43147.1| FMN-dependent dehydrogenase [Bilophila wadsworthia 3_1_6] Length = 345 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 98/318 (30%), Gaps = 37/318 (11%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N L R + E + E LG +L P+L + + G + M ++ Sbjct: 44 AFKNNVAALAGVRLNMRLIHE--VKKPVTETEVLGFRLRLPVLAAPIGGTSFNMGGALSE 101 Query: 78 NLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A + + VG + + + Sbjct: 102 AEYARAIVSGCREAGIVGCVGDGA-----PDELHEAGNAAITAEGGWGIPFIKPWEGEEL 156 Query: 133 GVQKAHQAV---HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + A VLG D L L + +P + + I S + + +LK Sbjct: 157 ERKMCRAAATGTRVLGMDIDAAGLIALARMGRP-VSPKTCAELAAIVDRSHELGMKFVLK 215 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + ++ D ++G ++ GG + ++ I Sbjct: 216 GI---MTVEDAIAAERAGCDGIVVSNHGGRALDHTPGTIEVLPAIAA------------- 259 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESL 308 + GG+R+G+D+LK++ GA + PF L S+ V + L Sbjct: 260 ----QVKGRMAVLMDGGIRDGLDVLKALAFGADAVLIGRPFCLAAVGGGSEGVKLTADHL 315 Query: 309 RKEFIVSMFLLGTKRVQE 326 + + SM L G V+E Sbjct: 316 YNQLVRSMVLTGCPSVRE 333 >gi|322376963|ref|ZP_08051456.1| L-lactate oxidase [Streptococcus sp. M334] gi|321282770|gb|EFX59777.1| L-lactate oxidase [Streptococcus sp. M334] Length = 378 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFTGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGIRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|312962170|ref|ZP_07776662.1| L-lactate dehydrogenase [Pseudomonas fluorescens WH6] gi|311283507|gb|EFQ62096.1| L-lactate dehydrogenase [Pseudomonas fluorescens WH6] Length = 380 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 117/374 (31%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N D L R L + D + G++L+ P+++S + TG + Sbjct: 29 AYAEHTLRANSSDLADISLRQRIL--RNVDNLSLKTTLFGQELAMPVVLSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGA 125 E A AA +A + + V + A +S F+L + + L Sbjct: 87 RGEV---QAAKAAAAQGIAFCLSTVSVCPIEEVASQSPQSIWFQLYVLKDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHL--------------------- 153 Q D A + G + Sbjct: 144 AQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAQRRMLQAITKPQWAFDVGLMGRPHD 203 Query: 154 --NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + + +P ++ + + + P+++K + L D + Sbjct: 204 LGNISKYLGKPTHLADYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGI---LDPQDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 + G ++ GG + + T +L +A ++ Sbjct: 261 DAVSFGADGIVVSNHGGRQLDGV------------------LSTAKALPPIAEAVGDDLA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G+D+++ + LGA L P A D V ++ KE V+M L Sbjct: 303 VLVDSGIRSGLDVVRMLALGAKACLLGRAPSYALAADGQRGVENLLDIFAKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G + ++ T + Sbjct: 363 GVTSIDQIDHTTLV 376 >gi|283835988|ref|ZP_06355729.1| L-lactate dehydrogenase [Citrobacter youngae ATCC 29220] gi|291068168|gb|EFE06277.1| L-lactate dehydrogenase [Citrobacter youngae ATCC 29220] Length = 408 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLTGAKSISEISR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|114769269|ref|ZP_01446895.1| L-lactate dehydrogenase, putative [alpha proteobacterium HTCC2255] gi|114550186|gb|EAU53067.1| L-lactate dehydrogenase, putative [alpha proteobacterium HTCC2255] Length = 388 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 114/372 (30%), Gaps = 77/372 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + N F+ + + + S + LGK + P+ ++ + TG + Sbjct: 32 SEQTFRENVSDFNKLYFKQKV--AVDISNRTTSTKMLGKNVKMPVALAPVGLTGLQHPDG 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVL-------- 119 E A AAEK + + + + + A + F+L + Sbjct: 90 EI---KAARAAEKFGIPFTLSTMSICSIEDVAKHTSTPFWFQLYCMNDRPFIENLIDRAK 146 Query: 120 ISNLGAVQLNYDF-----------------GVQKAHQAVHV-------LGADGLFLHL-- 153 +N A+ + D +++ LG H Sbjct: 147 SANCSALVITLDLQILGQRHKDIKNQMTAPPRLTIKNMLNMATKPRWCLGMLQTKRHGFS 206 Query: 154 NPLQEIIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + T+ +D + + ++LK + D ++ Sbjct: 207 NIIGHATGVENLTSLSDWSAKTLMRTLNWDDLDWIIKRWGGKVILKGIQ---DVEDAKMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +K+G ++ GG S I ++ + Sbjct: 264 VKTGADAIIVSNHGGRQLDGALSSIRSLPSI-----------------IDAVGDQIEVWM 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+ K++ LGA + PF+ V A++ + KE +M L G + Sbjct: 307 DGGIRSGQDVAKAVSLGAKGVMIGRPFIYGLGAMGQKGVSKALDIIHKELDTTMALCGER 366 Query: 323 RVQELYLNTALI 334 + + + LI Sbjct: 367 NITNMSRDNLLI 378 >gi|312113669|ref|YP_004011265.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodomicrobium vannielii ATCC 17100] gi|311218798|gb|ADP70166.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodomicrobium vannielii ATCC 17100] Length = 377 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 115/374 (30%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + + E G+KL+ P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVSDLASIALRQRVLK--NVADRSLETEIFGQKLAMPVTLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGA 125 E A AA V + + V + KS F+L + + L Sbjct: 87 RGEV---QAARAAASRGVPFTLSTVSVCPIEEVQKKSPAPIWFQLYVLKDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVHVLGADGLFLHL------------------------ 153 Q D V A G G H Sbjct: 144 AQAAGITTLVFTVDMPVPGARYRDAHSGMSGKNAHFRRMIQAVTHPGWSWDVGLRGRPHD 203 Query: 154 --NPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + +P G ++ + + P+++K + L D Sbjct: 204 LGNISAYLGKPTGLGDYIGWLGSNFDPSISWKDLEWIREFWKGPMIIKGI---LDVEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA + + A V ++ KE V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADCTMIGRAYTYALAAAGEAGVANLLDLFAKEMRVAMALT 362 Query: 320 GTKRVQELYLNTAL 333 G + + E+ ++ + Sbjct: 363 GVRSIAEITRDSLV 376 >gi|262282587|ref|ZP_06060355.1| lactate oxidase [Streptococcus sp. 2_1_36FAA] gi|262261878|gb|EEY80576.1| lactate oxidase [Streptococcus sp. 2_1_36FAA] Length = 378 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTDIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAAYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNTELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|125810146|ref|XP_001361375.1| GA15579 [Drosophila pseudoobscura pseudoobscura] gi|54636550|gb|EAL25953.1| GA15579 [Drosophila pseudoobscura pseudoobscura] Length = 366 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 114/330 (34%), Gaps = 61/330 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISCPIFGEQMKWPLGIAPTA---MQKMAHSDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + K F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPDTCKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + I L S + Sbjct: 171 NNFSLPSHLTLANFQGVKATGVATTSMGASGINEYVSSQFDPTITW--QDIKWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K + L++ D L + G ++ G + + + ++ Sbjct: 229 PIVVKGI---LTAEDAVLAKEFGCAGIIVSNHGARQIDTVPASIEALPEV---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 A+ N+ + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------AKAVGNDLLVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + LRK+F ++M L+G + ++++ + + Sbjct: 329 MLGVLRKDFEITMALIGCQTLKDIKSSMVV 358 >gi|156538859|ref|XP_001608027.1| PREDICTED: similar to CG18003-PA [Nasonia vitripennis] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 120/351 (34%), Gaps = 55/351 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N++ F + R L + + D S LG+K+S P+ +S K+ Sbjct: 30 AGEGITLKQNREAFKRLRIRPRVL--RNVSKRDISTTILGEKISMPVGVSPTA--KQKLA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------QRVMFSDHNAIKSFE---LRQYAPHTVLISN 122 + A + + + S Q V + NA+K F+ L+ +L Sbjct: 86 HPDGESANARAAEAANTIFILSTYSNTTIQDVGKAAPNAVKWFQTTVLKDR--DCILHCI 143 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF------ADLSSKIA 176 A Q + V + + + N ++ F L + Sbjct: 144 RRAEQAGFKAIVMTVDNPI--ILKSKISKSNNASSDVRNAVYEDYFLTKTSGKGLDNFDQ 201 Query: 177 LLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + ++D L + VG L++ D L G ++ G Sbjct: 202 CVRQSIDDSLTWEAVGWIKSVTHLPIVLKGILTAEDAVLAANHGASAIIVSNHGARQLDG 261 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + DI ++ + GG+R G D+ K++ LGA + Sbjct: 262 SPATIEALPDI-----------------VNAVQDKLEVYLDGGIRQGTDVFKALALGARM 304 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P L A + V A +E++R+E + L G VQ++ ++ + Sbjct: 305 VFIGRPMLWGLACGGEEGVRAVLETMRREVSETFALTGCSNVQQVGKDSVV 355 >gi|119503798|ref|ZP_01625880.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119460306|gb|EAW41399.1| l-lactate dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 387 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 115/377 (30%), Gaps = 84/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN FD W +I AL I + + + ++ P +S G +++ Sbjct: 33 ADDEWSLRRNTNAFDQWEIIPSALTGI--TKPTLNTRLFDRDIALPFFLSPT--GMSRLF 88 Query: 73 ERINRNLAIAAEK------TKVAMAVGS---------------QRVMFSDHNAIKSF--- 108 ++ LA A ++ S Q +F D +SF Sbjct: 89 HH-DKELAAARAAGKAGTFYSLSSMGSSTIEEVASAVRGPKLFQIYVFRDRALTQSFLER 147 Query: 109 -----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++R ++ + + + Sbjct: 148 CKSARYDAICLTVDTTVAGNRERDIRTGMTIPPSLALKSLLSFTTKWPWLLGLRHNRDFT 207 Query: 146 ADGLFLHLNPLQ-------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 L +++P + + + + + + L + PL++K + LS+ Sbjct: 208 LANLSKNIDPKNSGALNIFDYVNQQFDPSISW--EDVTWLRDRWEGPLIIKGL---LSAE 262 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + + G ++ GG + D + R + Sbjct: 263 DAKQAQRIGCTGVIVSNHGGRQLDSAAAPID------------------CISAMRDAVGD 304 Query: 259 -AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSM 316 I GG+R G I K++ LGAS + P+L + V AIE L E M Sbjct: 305 SMDLILDGGIRRGSHICKALALGASACSIGRPYLYGLAAGGEPGVNQAIEILASETRRCM 364 Query: 317 FLLGTKRVQELYLNTAL 333 L G V L + A+ Sbjct: 365 QLAGFHSVAALQSSGAV 381 >gi|145641880|ref|ZP_01797455.1| L-lactate dehydrogenase LctD [Haemophilus influenzae R3021] gi|148827155|ref|YP_001291908.1| L-lactate dehydrogenase [Haemophilus influenzae PittGG] gi|166990705|sp|A5UFG9|LLDD_HAEIG RecName: Full=L-lactate dehydrogenase [cytochrome] gi|145273502|gb|EDK13373.1| L-lactate dehydrogenase LctD [Haemophilus influenzae 22.4-21] gi|148718397|gb|ABQ99524.1| L-lactate dehydrogenase [Haemophilus influenzae PittGG] Length = 381 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMHVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 ADIK 371 >gi|218510679|ref|ZP_03508557.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli Brasil 5] Length = 395 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 120/364 (32%), Gaps = 75/364 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L ++S + GK + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFRPRVLRDVSTR--STATSLFGKTHAVPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFS-----------------DHNAIKSFELRQYAP-- 115 + LA A+++ + M + GS + + + I + R A Sbjct: 104 DIVLAQGADQSGIPMIISGSSLIPLEEIAAASPQAWFQAYLPGEPDRIDALIDRVAAAGI 163 Query: 116 HTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLNPLQ 157 T+L++ A N + V+ + + H P Sbjct: 164 KTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIARHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F S + + L++K + + D Sbjct: 224 ENSYATRGAPIISSNVTRDFGKRDHLNWSHLERIRKRWSGKLVVKGI---MHPEDASRAA 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAA-----------------RVGDSIAVMVD 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG R Sbjct: 324 GGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGLPGVLRAADILKTELYSNMALLGVTR 383 Query: 324 VQEL 327 V ++ Sbjct: 384 VGDI 387 >gi|331266774|ref|YP_004326404.1| lactate oxidase [Streptococcus oralis Uo5] gi|326683446|emb|CBZ01064.1| lactate oxidase [Streptococcus oralis Uo5] Length = 378 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +S+ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFISTYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPASFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|302525297|ref|ZP_07277639.1| L-lactate oxidase [Streptomyces sp. AA4] gi|302434192|gb|EFL06008.1| L-lactate oxidase [Streptomyces sp. AA4] Length = 411 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 72/370 (19%), Positives = 122/370 (32%), Gaps = 72/370 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ + L +VD S E LGK+ + P + TG M Sbjct: 67 AELEDSLRRARQAYRRVEFQPNVLRG--VSDVDTSREILGKRSALPFAFAP-TGFTRMMQ 123 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFELRQYAPHTVLISNLGAV 126 +A A++ + MA+ + D +A K F+L + H + Sbjct: 124 TEGESAVARVAQRNNLPMALSTMGTTSIEDLAAAAPDARKWFQLYVWRDHGAGEDLMNRA 183 Query: 127 Q--------LNYDFGV-----QKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNT----NF 168 L D V + + + A L ++ + N T NF Sbjct: 184 WESGYDTLLLTVDTPVAGQRLRDVRNGLTIPPAITLKTFVDGAMHPAWWFNLLTTEPLNF 243 Query: 169 ADL--------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 A L + + L++K V + D +K G Sbjct: 244 ASLNRFGGTVAELLDKLFDPTLNFDDLDWVRQTWPGKLVVKGVQ---NVDDARDVVKHGA 300 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR--PYCNEAQFIASGG 266 ++ GG R PTP+ L A EA+ G Sbjct: 301 DAVLLSNHGGRQLDRA-------------------PTPIELLPAALDAVEGEAEVWVDTG 341 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +G DI+ ++ GA+ + FL M + V ++ LR E + +M LLG +RV Sbjct: 342 ILSGGDIVAALARGANAVLIGRAFLYGLMAGGERGVQRCVDILRTEMVRTMQLLGVRRVD 401 Query: 326 ELYLNTALIR 335 +L A +R Sbjct: 402 DLRPTHATLR 411 >gi|304395427|ref|ZP_07377310.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. aB] gi|304356721|gb|EFM21085.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. aB] Length = 395 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L F+ A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAFIYALATHGQRGVENLLNLIEKEMRVAMTLTGAKSISEITR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|189208145|ref|XP_001940406.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976499|gb|EDU43125.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 401 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 121/370 (32%), Gaps = 79/370 (21%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + + + R L +I +D SV G + S PL ++ + + + LA Sbjct: 46 ENITAYQKYRIRPRVLRDI--SSIDTSVNIFGHENSIPLGVAPTA---MQCLAHGDGELA 100 Query: 81 --IAAEKTKVAMAVGSQRVM-FSD-HNAIKS---------FELRQYAPHTVLISN---LG 124 A + + M + S D + + S FE R + + + Sbjct: 101 TARACKNMDIVMGLSSFSTTTLEDVKSELGSHPGALQLYLFEDRPKSQKLIQRAKKAGYK 160 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--------EIIQ--------------- 161 AV L D V + + + L HL E + Sbjct: 161 AVMLTVDTPV-LGRRNLEIRNQFTLPKHLKIANFAHDEHDNEAVDLEEKDTTSTMTEETN 219 Query: 162 ----PNGNTNFAD--------LSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSG 207 P G F I+ L S + + LK + ++ D L G Sbjct: 220 HRTPPQGPITFHTHAPNPTLCWDRDISWLKSQCGPEMQVWLKGIA---TAEDALLACHHG 276 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGG 266 + ++ GG + + D ++ + R + + GG Sbjct: 277 VDGIVVSNHGGRQLNGALATIDALPEV--------------VAAVRSHTGKKVPVHVDGG 322 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI K++ LGA + P L A + V A+ L EF + M L G RV+ Sbjct: 323 IRHGTDIFKALALGADFVWVGRPVLWGLAYKGQEGVELALRLLADEFRLCMGLAGVTRVE 382 Query: 326 ELYLNTALIR 335 ++ LI+ Sbjct: 383 DI-GKEYLIK 391 >gi|111017824|ref|YP_700796.1| FMN-dependent dehydrogenase [Rhodococcus jostii RHA1] gi|110817354|gb|ABG92638.1| FMN-dependent dehydrogenase [Rhodococcus jostii RHA1] Length = 432 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 129/377 (34%), Gaps = 78/377 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--KMI 72 + + RN+ FDDW + R + + +D + LGK ++ PL++S TGG Sbjct: 55 DEASVRRNRSSFDDWSFVPR---WGAVENLDLASTLLGKPVAMPLMLSP-TGGTRLFHPE 110 Query: 73 ERINRNLAIAAEK--TKVA--MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ISN 122 I A A +A + V + + F + A +L +N Sbjct: 111 GEIGAARAALAANVPYGLAHLSTTPMELVSAQTPSLRRWFNIEPMADKGMLQAMLDRTAN 170 Query: 123 LGAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNP---LQEIIQP--------NGNTNFAD 170 G L + + H+ L P ++ + P N F + Sbjct: 171 AGYEALLVNVDCRAIGHRERDYRNGFTAPPSLKPRTVIEGALHPVWAWRFLRNDAIAFPN 230 Query: 171 LSSKIA----------------------------LLSSAMDVPLLLKEVGCGLSSMDIEL 202 L IA L S P++LK +S+ D + Sbjct: 231 LDGTIAAGPLASTPDMWRTLLSGSYEPTDWDTLCDLRSRWSGPIVLKGC---VSADDAAI 287 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 GI ++ GG + S D+ +I + I Sbjct: 288 AADIGIDAIQVSNHGGRQLDHMASPMDVLPEI-----------------VERVNGRVEII 330 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R G D +K++ LGA+ + P+L A + V + +E +M LLG Sbjct: 331 VDGGIRRGSDAIKALALGANACAIGRPYLYGLAAAGQEGVAHVLRIFAEEMTRTMMLLGV 390 Query: 322 KRVQELYLN-TALIRHQ 337 ++EL N +L+R++ Sbjct: 391 SSIKELQDNGPSLVRNR 407 >gi|78707188|ref|NP_001027401.1| CG18003, isoform B [Drosophila melanogaster] gi|28380896|gb|AAO41411.1| CG18003, isoform B [Drosophila melanogaster] Length = 366 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 116/334 (34%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISTKIFGEQMQWPLGIAPTA---MQKMAHPDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + IA L + Sbjct: 171 NNFSLPSHLSLANFQGVKATGVGNAAMGASGINEYVSSQFDPTITW--KDIAWLKGITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 229 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F +M L+G + + ++ +A++ H+ Sbjct: 329 MLSVLRKDFETTMALIGCQNLGDI--TSAMVVHE 360 >gi|145633452|ref|ZP_01789182.1| L-lactate dehydrogenase [Haemophilus influenzae 3655] gi|229845417|ref|ZP_04465547.1| L-lactate dehydrogenase [Haemophilus influenzae 6P18H1] gi|144986015|gb|EDJ92617.1| L-lactate dehydrogenase [Haemophilus influenzae 3655] gi|229811613|gb|EEP47312.1| L-lactate dehydrogenase [Haemophilus influenzae 6P18H1] Length = 381 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMCVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 ADIK 371 >gi|84687956|ref|ZP_01015821.1| L-lactate dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84664042|gb|EAQ10541.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 381 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 115/367 (31%), Gaps = 79/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F D L R L VD ++E G+ S P I TG N Sbjct: 30 AEAEVTLRRNRSSFTDIVLTPRILKG---GSVDLTLELFGETYSKPFFIGP-TGLNGLYW 85 Query: 73 ERINRNLAIAAEKTKV----------------------------AMAVGSQRVMFSDHNA 104 + + +LA AAE++ V G+ D Sbjct: 86 PQGDLHLAAAAERSGVGFTVSTASNTTLEEIAGKSKGPLWFQLYPWGQGAFAEALIDRAQ 145 Query: 105 IKSFE-----------------LR-------QYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + LR + P TVL L L+ + + Sbjct: 146 ASGYSALVLTVDSLVGGKRERDLRHGFAHEIRIGPRTVLDGLLHPAWLSSVWLGPHRPRL 205 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 ++L G + L E + N F+ + + PLL+K + + D Sbjct: 206 ENLLDFVGNSASDSELAEFTRSQRNPEFSW--DDVRRIREKWKGPLLIKGI---MCPEDA 260 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 ++G+ ++ GG + D+ +DI + Sbjct: 261 IDAQRAGVDGVIVSNHGGRQLDGAPATIDVLADIIAALD-----------------RKFP 303 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G DI+K++ LGA L L A V A+ L E +M + Sbjct: 304 VLLDGGIRRGSDIVKALTLGAKGVLLGRAPLYGLAAQGEAGVSRALSILEDEMTRTMTFV 363 Query: 320 GTKRVQE 326 G + V Sbjct: 364 GARSVSA 370 >gi|152997714|ref|YP_001342549.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinomonas sp. MWYL1] gi|150838638|gb|ABR72614.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Marinomonas sp. MWYL1] Length = 382 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 71/373 (19%), Positives = 120/373 (32%), Gaps = 73/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN F+ L+ L +VD SV +G+KL+ P+ S T Sbjct: 32 ADDETTYRRNTAAFEACDLVPSVL--TGVKDVDLSVTVMGQKLALPIYCSP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNY 130 R +A +AEK V S + + A ++ ++ Q+ H N +Q Sbjct: 89 HDGERAVANSAEKYGTMFGVSSLGTVSMEEIAKQTTTPQVYQFYFHKDRELNRAMMQRAK 148 Query: 131 DFGVQKAHQAVHVLG------------ADGLFLHLN-PLQEIIQPN-------------- 163 D GVQ V + A L+L +Q I++P Sbjct: 149 DAGVQVMMLTVDSITGGNRERDLRTGFAIPFKLNLKGIMQFILKPMWGINYVTHEKFRLP 208 Query: 164 --------------------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + +A + D LK + +S D Sbjct: 209 QLEEHIDMGSGATSIGDYFTNMLDPSMNWDDVAEMVKFWDGQFCLKGI---MSREDARKA 265 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++ G I+ GG R + + + G +E I Sbjct: 266 VEIGCTGVIISNHGGRQLD---GSRSSFDQLAEIVDEVG--------------DEIDVIF 308 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G++ G +LK++ LGA G+ +L P A V A+ ++ E M L+G Sbjct: 309 DSGVQRGTHVLKALSLGAKAVGIGRMYLYPLAAAGQPGVERALGLMKAELERDMKLMGKT 368 Query: 323 RVQELYLNTALIR 335 + +L R Sbjct: 369 SIDQLTRENLRFR 381 >gi|300311906|ref|YP_003775998.1| L-lactate dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300074691|gb|ADJ64090.1| L-lactate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 114/340 (33%), Gaps = 73/340 (21%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV- 97 I+ DE +G ++ P+ I+ TG AIAAEK + + + + Sbjct: 54 INVDERSTRTTMIGHDVTMPVAIAP-TGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSIC 112 Query: 98 MFSDHNAIKS----FELRQYAPHTVL--------ISNLGAVQLNYDF--------GVQKA 137 D ++ + F+L + + A+ L D ++ Sbjct: 113 SIEDVASVTTKPFWFQLYVMRDRGFVKSLIERAKAAKCSALVLTLDLQILGQRHKDLKNG 172 Query: 138 HQAVHVLGADGLF-LHLNPLQEIIQPNGNTNFADLSSKI--------------------- 175 L + L L P + G F +L+ I Sbjct: 173 MSVPPKLTLETLLDLASKPGWALRALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFD 232 Query: 176 --------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A + L+LK + L D +L ++SG ++ GG S Sbjct: 233 PTLNWDDVAWIKQQWGGKLILKGI---LDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSS 289 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + I A+ ++ + GG+R+G D+LK++ LGA + Sbjct: 290 IEALPAI-----------------AQAVGDQIEVWFDGGIRSGQDVLKAVALGARGTMIG 332 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 FL + V +E +RKE VSM L GTK +++ Sbjct: 333 RAFLYSLGAMGGEGVSQMLEIMRKELDVSMALTGTKDIKD 372 >gi|194396827|ref|YP_002037363.1| L-lactate oxidase [Streptococcus pneumoniae G54] gi|194356494|gb|ACF54942.1| L-lactate oxidase [Streptococcus pneumoniae G54] Length = 378 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+K S P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKXSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A+ L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKDEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L G + +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPY 364 >gi|257455063|ref|ZP_05620306.1| L-lactate dehydrogenase [Enhydrobacter aerosaccus SK60] gi|257447535|gb|EEV22535.1| L-lactate dehydrogenase [Enhydrobacter aerosaccus SK60] Length = 382 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 122/370 (32%), Gaps = 77/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L ++D S E G++LS P+ +S + TG + Sbjct: 29 AYAEYTLKRNVEDLSSIALRQRVLK--DMTQLDLSTEIFGEQLSLPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A+AA+K + + + V + K F+L R++ + + Sbjct: 87 RGEV---QAAMAADKKGIPFTMSTVSVCPIEEVTPKINRPMWFQLYVLRDRKFMQNVLER 143 Query: 121 SNL---GAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP------------ 162 + + D V A + G + LQ P Sbjct: 144 AKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRY--LQACTHPHWAIDVGLLGRP 201 Query: 163 -------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIEL 202 L I L + D + K++ L D + Sbjct: 202 HDLGNVSKYLGKAIGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGAMVIKGILDPQDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + T +L ++ + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------MSTATALPKIVDAVKGDIKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+RNG+D+++ + LGA L L F+ A D V + + KE V+M L Sbjct: 304 LVDSGIRNGLDVVRMLALGADLCMLGRAFVYALAADGEAGVTNLLNLIDKEMRVAMTLTS 363 Query: 321 TKRVQELYLN 330 R+Q++ + Sbjct: 364 ANRIQDINRD 373 >gi|72384067|ref|YP_293421.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ralstonia eutropha JMP134] gi|72123410|gb|AAZ65564.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ralstonia eutropha JMP134] Length = 390 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 112/369 (30%), Gaps = 79/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN+ + + L L + + D LG +++ P++I+ TG N Sbjct: 42 AGDEATARRNRSALERYLLPQEVL--VDLSDRDIGTTVLGSRIATPIVIAP-TGMNGAYW 98 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLG 124 + LA AA + + + + + D + + LR L++ + Sbjct: 99 HNGDLCLARAAARLGIPFVMSTAATVGLDTLCEAAGPLRWFQLYMLRDRGLAAALLARVH 158 Query: 125 AVQLN-YDFGVQKA---HQAVHVLGADGLFLHLN-------------PLQ---------- 157 A + + + A +A + L N LQ Sbjct: 159 AAGFSVLELTIDTAVTGRRARDIRNGFTLPFRWNLKKLCDVSRRPRWALQMLRGGSPALK 218 Query: 158 ----------------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 E++Q + F +A L + L+LK V +++ Sbjct: 219 LFAEAVGRVPKGSTITEVMQQQISDAFTW--DDLAWLRAEWPGKLVLKGV---MTAGQTH 273 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + +G ++ GG G T L + Sbjct: 274 RAIAAGADGVVVSNHGGRQQDG------------------GRSTIECLPHVVDAAQARID 315 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLL 319 + G R G DI K+I LGA + P L + V AI L EF +M L Sbjct: 316 VLVDSGFRTGADIAKAIALGAVAVQIGRPALFGLAAGGERGVWQAISILADEFDRAMALT 375 Query: 320 GTKRVQELY 328 G V L Sbjct: 376 GATSVAALR 384 >gi|195172732|ref|XP_002027150.1| GL20092 [Drosophila persimilis] gi|194112963|gb|EDW35006.1| GL20092 [Drosophila persimilis] Length = 366 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 114/330 (34%), Gaps = 61/330 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 +D S G+++ +PL I+ + + + + A AA K + + Sbjct: 54 DVSRLDISCPIFGEQMKWPLGIAPTA---MQKMAHSDGEVGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + K F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLAAGAPDTCKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + E + + I L S + Sbjct: 171 NNFSLPSHLTLANFQGVKATGVATTSMGASGINEYVSSQFDPTITW--QDIKWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K + L++ D L + G ++ G + + + ++ Sbjct: 229 PIVVKGI---LTAEDAVLAKEFGCAGIIVSNHGARQIDTVPASIEALPEV---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 A+ N+ + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------AKAVGNDLLVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + LRK+F ++M L+G + ++++ + + Sbjct: 329 MLGVLRKDFEITMALIGCQTLKDIQSSMVV 358 >gi|167647570|ref|YP_001685233.1| L-lactate dehydrogenase [Caulobacter sp. K31] gi|259494969|sp|B0T7X2|LLDD_CAUSK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|167350000|gb|ABZ72735.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Caulobacter sp. K31] Length = 380 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 108/372 (29%), Gaps = 81/372 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L V G + + P+ ++ + TG + Sbjct: 29 AYAERTLARNVSDLADISLRQRVLK--DVSRVSTRTTLFGVEQTLPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFELRQYAPHTVLISNLGA 125 E A AA V + + V + +A F+L + L Sbjct: 87 RGEV---QAARAAAAKGVPFCLSTVSVCDLAEVSRASSAPIWFQLYMLRDRGFMRDLLAR 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN----------- 163 D V A + G + L +Q + +P Sbjct: 144 AADAGATALVFTVDMPVPGARYRDAHSGMTGPNAAMRRL--VQAVFKPGWAWDVGVMGRP 201 Query: 164 --------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 G +F + + PL+LK V L D Sbjct: 202 HTLGNVAPVLGENTGLEDFMGWLGANFDPSIQWKDLDWIRDQWKGPLILKGV---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G ++ GG + S DI + Sbjct: 259 AKAAADIGADGIVVSNHGGRQLDGVLSSARALPDIAE-----------------AVGDRL 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A GG+R+G+D+++ + LGA L F+ A V ++ + KE V+M L Sbjct: 302 TVLADGGVRSGLDVVRMLALGAKGVLLGRAFVYALAARGGPGVSQLLDLIEKEMRVAMAL 361 Query: 319 LGTKRVQELYLN 330 G + ++ + Sbjct: 362 TGVNTLDQIDRS 373 >gi|260803159|ref|XP_002596458.1| hypothetical protein BRAFLDRAFT_243691 [Branchiostoma floridae] gi|229281715|gb|EEN52470.1| hypothetical protein BRAFLDRAFT_243691 [Branchiostoma floridae] Length = 287 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 116/319 (36%), Gaps = 58/319 (18%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 + L+ R L + D +V LG L P++I+ T ++ + R A AA Sbjct: 1 RYRLLTRVL--RDVSKQDTAVTVLGSILDLPVVIAP-TAQHSLAHDDGERATAKAAAALN 57 Query: 88 VAMAVGS-QRVMFSD-----HNAIKSFEL---RQYAPHTVLISNL-----GAVQLNYDFG 133 V M V S D ++ F L + A + L++ AV L D Sbjct: 58 VGMVVSSWASCSIEDISDAAPVGVRWFHLTLQKDVARNKALLARAEKAGCTAVVLTVDQP 117 Query: 134 VQK---AHQAVH-VLGADGLFLHLNPLQEIIQPNGNTNF-------ADLSSKIALLSSAM 182 V + ++G+D +F N N + NF + + Sbjct: 118 VARRTCIEYRNEFLVGSDTMFCPFNSC-----YNSHHNFMVPILENPITWGDVVWTKTNT 172 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P++LK + LS+ D E ++ G+ ++ GG + D+ D+ Sbjct: 173 SLPVVLKGI---LSAEDAEEAVRRGVDAICVSNHGGRQLDGL----DVLPDV-------- 217 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAV 301 R + GG+R G DILK++ LGA + P L A D V Sbjct: 218 ---------VRVVGGRLEVYMDGGVRTGADILKALALGAKCVFVGRPVLWALAYQGEDGV 268 Query: 302 VAAIESLRKEFIVSMFLLG 320 A++ L E V+M G Sbjct: 269 RQALQVLNDELRVAMAHTG 287 >gi|145636802|ref|ZP_01792468.1| L-lactate dehydrogenase [Haemophilus influenzae PittHH] gi|145270100|gb|EDK10037.1| L-lactate dehydrogenase [Haemophilus influenzae PittHH] Length = 381 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L E+D S+E G+KLS P +++ + G R Sbjct: 31 AEQTLARNVSDLENIALRQRVLK--DMSELDTSIELFGEKLSMPTILAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA+ V + + + + A F+L + A++ Sbjct: 88 GEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMK---NALERA 144 Query: 130 YDFGVQKAHQAVHV--LGADGLFLH---LNPLQEI---IQPNGNTNFA------------ 169 G V + GA +H P +EI +Q + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTL 204 Query: 170 -----------DLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLK 205 L I L+ D + K++ L D + ++ Sbjct: 205 GNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I + + IA Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKIIADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ + LGA L F+ V ++ +KE V+M L + + Sbjct: 308 GIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMCVAMTLTSNRTI 367 Query: 325 QELY 328 ++ Sbjct: 368 SDIK 371 >gi|15966045|ref|NP_386398.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15075315|emb|CAC46871.1| (S)-2-hydroxy-acid oxidase [Sinorhizobium meliloti 1021] Length = 364 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 119/338 (35%), Gaps = 56/338 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ D R L +S VD S+E G++L P+ ++ TG N Sbjct: 42 AETETTLKRNRLAIDSIAFKPRVLRNVSV--VDLSIEHFGRRLRLPIFLAP-TGPLNLFG 98 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +A A+ VA + S + + AP + ++ L D Sbjct: 99 PGGGAAVASGAQVFGVAHMLSSGCTPLE--------SVAEAAPSALRMAQLYVR--GDDA 148 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA------------------DLSSK 174 V K G + L ++ + + + A L + Sbjct: 149 SVHKYVGRALASGCAAICLTVDS---AVLARRDRDIANRHRTAGLGKWPGQAYQAGLDWR 205 Query: 175 IALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 L + D+PL+LK + + D + + G+ + ++ GG D+ + Sbjct: 206 TVKLIKDSYDIPLVLKGIA---TVEDARIAVDHGVDWIYVSNHGGRQLDHGRGTMDVLPE 262 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +A+ + GG G DI+K++ +GA+L GL Sbjct: 263 I-----------------IDAVGGQAKVMVDGGFCRGTDIIKALAIGANLVGLGRMQCYA 305 Query: 294 AMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A++ +E + E + SM LLG + +L + Sbjct: 306 LAAGGEAAIIRMLELIEDEMLRSMALLGVPTIGDLDRS 343 >gi|307305599|ref|ZP_07585346.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] gi|307317540|ref|ZP_07596979.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306896698|gb|EFN27445.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti AK83] gi|306902302|gb|EFN32898.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sinorhizobium meliloti BL225C] Length = 364 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 119/338 (35%), Gaps = 56/338 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ D R L +S VD S+E G++L P+ ++ TG N Sbjct: 42 AETETTLKRNRLAIDSIAFKPRVLRNVSV--VDLSIEHFGRRLRLPIFLAP-TGPLNLFG 98 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +A A+ VA + S + + AP + ++ L D Sbjct: 99 PGGGAAVASGAQVFGVAHMLSSGCTPLE--------SVAEAAPSALRMAQLYVR--GDDA 148 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA------------------DLSSK 174 V K G + L ++ + + + A L + Sbjct: 149 SVHKYVGRALASGCAAICLTVDS---AVLARRDRDIANRHRTAGLGKWPGQAYQAGLDWR 205 Query: 175 IALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 L + D+PL+LK + + D + + G+ + ++ GG D+ + Sbjct: 206 TVKLIKDSYDIPLVLKGIA---TVEDARIAVDHGVDWIYVSNHGGRQLDHGRGTMDVLPE 262 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +A+ + GG G DI+K++ +GA+L GL Sbjct: 263 I-----------------IDAVGGQAKVMVDGGFCRGTDIIKALAIGANLVGLGRMQCYA 305 Query: 294 AMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A++ +E + E + SM LLG + +L + Sbjct: 306 LAAGGEAAIIRMLELIEDEMLRSMALLGVPTIGDLDRS 343 >gi|223647272|gb|ACN10394.1| Hydroxyacid oxidase 1 [Salmo salar] gi|223673151|gb|ACN12757.1| Hydroxyacid oxidase 1 [Salmo salar] Length = 369 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 IA L +P+++K V L + D L G+ ++ G + + D+ Sbjct: 218 CWEHIAWLKKNTHLPVVVKGV---LRAEDALEALIHGVDGILVSNHGARQLDGVPATLDV 274 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 S++ + GG+R G D+LK++ LGA+ L P Sbjct: 275 LSEV-----------------VSAVAGRCEVYLDGGVRRGTDVLKALALGATAVFLGRPV 317 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L A V +E +R E ++M L G V E +N +L+R Sbjct: 318 LWGLACQGEQGVSDVLELMRDELHLAMALAGCCSVAE--VNRSLVRR 362 >gi|170748958|ref|YP_001755218.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium radiotolerans JCM 2831] gi|170655480|gb|ACB24535.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium radiotolerans JCM 2831] Length = 381 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 63/384 (16%), Positives = 125/384 (32%), Gaps = 90/384 (23%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--- 63 D+I+ D RN FD L+ L + ++D SV +G++L+ P+ S Sbjct: 26 DYIDGAADDEVTYRRNTSAFDRCDLVPNVLRGVG--DIDLSVTVMGQRLALPVYCSPTAL 83 Query: 64 --------------------------------------MTGGNN------KMIERINRNL 79 ++GG +NR + Sbjct: 84 QRLFHHQGERAVAAAAGKYGTMFGVSSLGTVSLEEARRISGGPQVYQFYFHKDRGLNREM 143 Query: 80 AIAAEKTKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A++ + + V S + + F + P + ++ + + +G+ Sbjct: 144 MARAKQAGIEVMMLTVDSITGGNRERDKRTGFSI----PFRLTLAGMIQFAMKPAWGINY 199 Query: 137 A-HQAVHVLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 H++ + DG H++ + + + + +A + LK Sbjct: 200 VTHESFKLPQLDG---HVDMGGGALSISRYFTEMLDPSLSW--DDVAAMVREWGGQFCLK 254 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V +S D + + G ++ GG + D ++I Sbjct: 255 GV---MSVEDAKRAVDIGCTGIILSNHGGRQLDGSRTAFDQLAEI--------------- 296 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 + I GG++ G +LK++ +GA GL +L P A V A++ + Sbjct: 297 --VDAVGDRIDVIMDGGVQRGTHVLKALSVGAKAVGLGRYYLFPLAAAGQAGVERALDLM 354 Query: 309 RKEFIVSMFLLGTKRVQELYLNTA 332 R E M L+G V +L + Sbjct: 355 RSEIERDMRLMGCASVDQLTRSNL 378 >gi|257870144|ref|ZP_05649797.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus gallinarum EG2] gi|257804308|gb|EEV33130.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus gallinarum EG2] Length = 367 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 111/349 (31%), Gaps = 58/349 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N++ F+ +I L +I D F G L+ P++++ + + Sbjct: 42 AGDTFTYRENERAFNHKLIIPHVLKDIEL--PDTRTNFSGDTLNAPIIMAPVA---AHGL 96 Query: 73 ERINRNLAIA---AEKTKVAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL 123 +N A A A + A + A + F+ + L Sbjct: 97 ANVNAEKASAKGVARFGTIYTASSYASCTLEEIRAAGGEQAPQWFQFYMSKDDGINRDIL 156 Query: 124 --------GAVQLNYDFGVQKAHQ-----------AVHVLGADGLFLHLNPLQEIIQPNG 164 A+ L D V + A+ ++ A + Q + G Sbjct: 157 AMAKRNGAKAIVLTADATVGGNRETDRRNGFTFPLAMPIVQAYQSGI----GQTMDAVYG 212 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 ++ +A ++ D+P+ +K V S D+ L +G + ++ GG Sbjct: 213 SSKQKLSPQDVAFIAKESDLPVYVKGVQ---SEEDVARALDAGAQGIWVSNHGGRQLDGG 269 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D +A + G+R G + K+I GA L Sbjct: 270 PAAFDSLQ-----------------IVADAVAGRVPIVFDSGVRRGQHVFKAIASGADLV 312 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A+ S V + +KE + M L GT+ + ++ Sbjct: 313 AIGRPVIYGLALGGSTGVQQVFDFFKKELEMVMQLAGTQTIADIRQAKL 361 >gi|241766428|ref|ZP_04764303.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] gi|241363389|gb|EER58895.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] Length = 373 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 111/354 (31%), Gaps = 70/354 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ +D L R L ++ V LG L+ P+L++ + ++ Sbjct: 40 AADEITLRANRSAWDALALWPRVLRPLAGGH--TRVTLLGHTLAHPILLAPIA--AQRLA 95 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A A V S + S + + +R L L +Q + F Sbjct: 96 HPDGELAMAYAAAALGAGVVLSTQASASLESIAE--AVRPDPGRGPLWFQL-YLQHDRGF 152 Query: 133 GVQKAHQAVHVLGADGLFL-------------------------HLN------------- 154 +A G + L L H+N Sbjct: 153 TQALVARA-EAAGYEALVLTVDAPTSGARDRERRAGFRLPPGVGHVNLAGLQPLPAPPLS 211 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P Q + + +A L S +P++LK V L D + G ++ Sbjct: 212 PGQSALFDRLLHHAPTWDD-VAWLQSITRLPIVLKGV---LHPADARQAISLGAAGLIVS 267 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDI 273 GG + + T +L + + + GG+R G D+ Sbjct: 268 NHGGRTLDTAPA------------------TAHALPRVVQAVQGAVPVLVDGGIRRGTDV 309 Query: 274 LKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK+I LGAS + P A + V + LR E ++M L G + E Sbjct: 310 LKAIALGASAVLVGRPAVWGLANAGAAGVAHVLRLLRDELEIAMALTGCATMAE 363 >gi|49475082|ref|YP_033123.1| L-lactate dehydrogenase [Bartonella henselae str. Houston-1] gi|81827744|sp|Q6G4R2|LLDD_BARHE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|49237887|emb|CAF27083.1| L-lactate dehydrogenase [Bartonella henselae str. Houston-1] Length = 383 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 112/373 (30%), Gaps = 79/373 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L + EVD S + + L P++++ + TG + Sbjct: 29 AYAEETMRRNYADLQALALRQRILRGVG--EVDLSTKLFDQTLDLPIILAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIKS---FELRQYAPHTVLISNLGA 125 E A AA + + S + A+ S F+L + L Sbjct: 87 RGEV---QAARAAVAKGIPFTLSSVSVCPIAEVQKAVGSAFWFQLYVLKDRGFMRDVLER 143 Query: 126 VQ--------LNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPN------------- 163 D V A G G + L LQ I P+ Sbjct: 144 SWASGVRTLVFTVDMPVPGARYRDAHSGMSGSYAGLRRILQAFIHPHWAWNVGIMGRPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + ++LK + L D Sbjct: 204 LGNVSTYLQKKIALDDYIGWLGANFDPSIGWHDLQWIRDFWKGKMILKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A ++ Sbjct: 261 EAIQFGADGIVVSNHGGRQLDGV------------------LSTVRALPAIAEAVKSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G+D+++ I GA + F+ A V I+ E V+M L Sbjct: 303 ILVDSGVRSGLDVVRMIAQGADAVMIGRAFVYALAAAGEKGVAHLIDLFANEMRVAMTLT 362 Query: 320 GTKRVQELYLNTA 332 G + ++E+ + Sbjct: 363 GVRAIKEITRESL 375 >gi|188586641|ref|YP_001918186.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351328|gb|ACB85598.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 336 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 115/314 (36%), Gaps = 39/314 (12%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEF--LGKKLSFPLLISSMTGGNNKMIERINRNL 79 N + + + L R++ + + P E G++++ P+L + + G N I+ Sbjct: 48 NFRALNMYQLNLRSMHQ----AISPETELILFGERIATPILPAPIGGMNVNFNNVISEKE 103 Query: 80 AI-----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A++ G + + ++SF+ ++ + + + Sbjct: 104 YADSVSYGAKQAGTISTCGDGSLDEVFESGLQSFQKAGVPGIAMIKPR------SVEGII 157 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + QA GA + + ++ + G ++ + + +P ++K V Sbjct: 158 NRIRQA-EESGAIAVGVDVDACAFNMAEKGAPVGPKSFYQMRRIVQSTSLPFIIKGV--- 213 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ + E+ ++ G ++ GG + ++ +I Sbjct: 214 MTVQEAEMAVEMGAAGIVVSNHGGRALDYTPGTAEVLPEIAE-----------------K 256 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFI 313 E + GG+R+G+D+LK + LGA + P L D ++ V +E + E Sbjct: 257 VKGEIVIMVDGGIRSGIDVLKVLALGAEFVLVGRPVLHGVFADYNNGVSTVLEQMTSELR 316 Query: 314 VSMFLLGTKRVQEL 327 +M L G V+ + Sbjct: 317 RTMMLTGCAHVKAI 330 >gi|302889602|ref|XP_003043686.1| hypothetical protein NECHADRAFT_48201 [Nectria haematococca mpVI 77-13-4] gi|256724604|gb|EEU37973.1| hypothetical protein NECHADRAFT_48201 [Nectria haematococca mpVI 77-13-4] Length = 393 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 112/334 (33%), Gaps = 62/334 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPS--VEFLGKKLSFPLLISS-MTGGNNKMI 72 + N + ++ + R + + +++ S LG K S P IS T G Sbjct: 79 EWSYRNNLEVYERYRFRPRVM--VDVTDIESSMETTILGHKFSAPFFISPCATAGLAHAE 136 Query: 73 ERINRNLAIAAEKTKV------AMAVG--------------SQRVMFSDHNAIKSFELRQ 112 I L AA + + A +V +Q++ S++ S R+ Sbjct: 137 GEIG--LLKAAAEQNILYIPSIASSVPLEKIAAARTLTMLTTQQIYVSNNKTADSLLFRR 194 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 + LG L A L N Q + +F ++ Sbjct: 195 -------MEKLGVKALVL-----TVDSAGDRTRHRALRFEENTNQA-----RSASFRRMT 237 Query: 173 SKI-ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L +P++ K + + D +++G ++ GG + S ++ Sbjct: 238 WAIYRDLQKLTKLPIIPKGIQ---TVEDAVQAMEAGAPAIFLSNHGGRALDGSPSAFEVA 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I A + + A GG+R G D+L+ + LG GL PF+ Sbjct: 295 LEIHKK--------------APQVFKKIEVYADGGVRYGTDVLRLLALGVRAVGLGRPFM 340 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + ++ V A L+ E S LG ++ Sbjct: 341 FANLYGAEGVSRAATLLKTEITASGASLGVADLK 374 >gi|319406602|emb|CBI80244.1| L-lactate dehydrogenase [Bartonella sp. 1-1C] Length = 383 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 113/371 (30%), Gaps = 73/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L ++ +VD S E LG+KL P++++ + TG + Sbjct: 29 AYAEETMRRNCTDLQELALRQRILKQVG--DVDLSTEILGQKLGMPIVLAPVGLTGMYAR 86 Query: 71 MIE----------------------RINRNLAIAAEKTKVAMAV----GSQRVMFSDHNA 104 E I+ A ++ + V G R + A Sbjct: 87 RGEVKAARAAVAKDIPFTLSSVSVCPISEVHAAVGKEFWFQLYVLKDRGFMRDVLERSWA 146 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------N 154 L V + + + + ++ N Sbjct: 147 SGVRTLVFTVDMPVPGARYRDAHSGMSGPYAGLRRIIQSIFHPHWAWNVGVMGHPHDLGN 206 Query: 155 PLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + ++ + + ++LK + L D + Sbjct: 207 VSTYLKKKTTLKDYIGWLGANFDPSISWGDLRWIRDFWKGKMILKGI---LDPEDAREAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L ++A + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTARALPKIADVIKGDLTILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G+D+++ I GA + F+ A V +E +E V+M L G + Sbjct: 306 DSGIRSGLDVVRMIAQGADAVMIGRAFVYALAAAGEQGVTHLLELFSQEMRVAMTLTGVR 365 Query: 323 RVQELYLNTAL 333 ++E+ + Sbjct: 366 TIKEITHENLV 376 >gi|262040657|ref|ZP_06013895.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042021|gb|EEW43054.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 394 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 33/188 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K ++E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGAKSIREISR 372 Query: 330 NTALIRHQ 337 ++ + + Sbjct: 373 DSLVQNAE 380 >gi|330504854|ref|YP_004381723.1| L-lactate dehydrogenase [Pseudomonas mendocina NK-01] gi|328919140|gb|AEB59971.1| L-lactate dehydrogenase [Pseudomonas mendocina NK-01] Length = 379 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 123/378 (32%), Gaps = 80/378 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L + E+D S E G+K+S P+ ++ + G Sbjct: 29 AYAEHTLRRNVADLSDIELRQRVLK--NMSELDLSTELFGEKMSMPVGLAPV-GLTGMFA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN 122 R A AA + + + V + A F+L R + + + + Sbjct: 86 RRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMKNALERAK 145 Query: 123 L---GAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 + D V A + G + + LQ + P Sbjct: 146 AAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRM--LQAMTHPQWAWDVGLLGKPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + D P+++K + L D Sbjct: 204 LGNISAYRGNPTGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + G ++ GG + + + +L +A + + Sbjct: 261 DAVTFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGDLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R G+D+++ I LGA L FL A V ++ + KE V+M L Sbjct: 303 ILADSGIRTGLDVVRMIALGADTVLLGRAFLYALAAAGGAGVSNLLDLIEKEMRVAMVLT 362 Query: 320 GTKRVQELYLNTALIRHQ 337 G K + E+ + L++ + Sbjct: 363 GAKSIAEV-TSDLLVKER 379 >gi|311106987|ref|YP_003979840.1| L-lactate dehydrogenase [cytochrome] 2 [Achromobacter xylosoxidans A8] gi|310761676|gb|ADP17125.1| L-lactate dehydrogenase [cytochrome] 2 [Achromobacter xylosoxidans A8] Length = 381 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 111/381 (29%), Gaps = 89/381 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + RN F+ L+ L +VD SV +G+KL+ P+ S Sbjct: 32 ADDETTYRRNTAAFESCDLLPDVLRG--VSDVDMSVTVMGQKLALPVYCSPTALQRLFHH 89 Query: 64 --------------------------------MTGGNN------KMIERINRNLAIAAEK 85 ++GG +NR + A+ Sbjct: 90 DGERAVAAAAGKFGTMFGVSSLGTVSLEEARKISGGPQVYQFYFHKDRGLNREMMARAKD 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL-GAVQLNYDFGVQKAHQAV 141 V + V S + + F + NL G Q + Sbjct: 150 AGVQVMMLTVDSITGGNRERDKRTGFAI-------PFRLNLAGIAQFAIKPAWALNYLTH 202 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGL 195 L H++ + + F D+ +A + LK V + Sbjct: 203 ERFRLPQLDTHVDMGGGAMS--ISRYFTDMLDPAMTWDDVAAMVQEWGGQFCLKGV---M 257 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D G ++ GG S D ++I Sbjct: 258 SVEDARRAADIGCTGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAV 300 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIV 314 + + GG++ G +LK++ LGA GL +L P A V A+E +R E Sbjct: 301 GDRIDVMMDGGVQRGTHVLKALALGAKAVGLGRYYLFPLAAAGRPGVERALELMRVEIER 360 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M L+G + V EL R Sbjct: 361 AMKLMGCRTVAELQRRHLRFR 381 >gi|150376630|ref|YP_001313226.1| L-lactate dehydrogenase [Sinorhizobium medicae WSM419] gi|150031177|gb|ABR63293.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium medicae WSM419] Length = 378 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 118/364 (32%), Gaps = 73/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTEGTYRANEEDFARIKLRQRVL--VDMSDRSLETTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLI------- 120 A AAE + + + + + A + F+L ++ Sbjct: 87 ADGEMLAAQAAEAFGIPFTLSTMSICSIEDVASATTKPFWFQLYVMREREFVLNLIDRAK 146 Query: 121 -SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFL-------------------- 151 + A+ L D ++ A L L++ Sbjct: 147 AAKCSALVLTLDLQILGQRHKDLRNGLSAPPRLTPKHLWMMATRPGWCMKMLGTNRRTFG 206 Query: 152 ----HLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 H + ++ + N + + + PL+LK + L D ++ Sbjct: 207 NIVGHAKSVSDLSSLQVWTNEQFDPQLSWKDVEWIKERWGGPLILKGI---LDPEDAKMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 KSG ++ GG S + I ++ + Sbjct: 264 AKSGADAIIVSNHGGRQLDGAHSSISMLPRI-----------------VDAVGDQIEVHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL + V A++ +RKE +M L G + Sbjct: 307 DGGIRSGQDVLKAVALGAKGTYIGRPFLYGLGALGKEGVRIALDIIRKEMDTTMALCGKR 366 Query: 323 RVQE 326 R+ + Sbjct: 367 RITD 370 >gi|30250062|ref|NP_842132.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Nitrosomonas europaea ATCC 19718] gi|30139169|emb|CAD86037.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Nitrosomonas europaea ATCC 19718] Length = 361 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 114/340 (33%), Gaps = 46/340 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N FD LI R P + + G+ L+ P++++ + ++ Sbjct: 43 NQVTLHTNNCVFDSIRLIPR--PMADVRDGHTRITLFGQTLAHPVILAPLA--YQRLYHP 98 Query: 75 INR-NLAIAAEKTKVAMAVGS-QRVMFSD----HNAIKSFELR--QYAPHTVLISN--LG 124 A+AA + V S + F+L + P T+ + + Sbjct: 99 HGESASAMAANAQGGQLCVSSLASQTLEEIITAAGQPLWFQLYWQEDRPRTLKLLRRAVT 158 Query: 125 AVQLNYDFGVQK-AHQAVHVLGADGLFLHLN---PLQEIIQPNGNTNFADL------SSK 174 A F V QA L A ++L+ P ++ P+ + F Sbjct: 159 AGYQAIVFTVDAPIKQATIQLPASISAVNLDTPAPFPALL-PHQSQVFNGWMAQAPRWED 217 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A L + +PLL+K + L D + G ++ GG + +I Sbjct: 218 LAWLRAQTSLPLLVKGI---LHPEDARKVINLGYDGLVVSNHGGRVLDGAPASLACLPEI 274 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKP 293 + + G+RNG DI K++ LGA + P Sbjct: 275 -----------------VSTVSGRGKVLFDSGIRNGRDIYKALALGADAVLIGRPYIWGL 317 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A + V I LR E ++M L GT ++E+ + Sbjct: 318 ATVGALGVAHVIRLLRDELEMTMALTGTASIREITREKII 357 >gi|46581188|ref|YP_011996.1| FMN-dependent family dehydrogenase [Desulfovibrio vulgaris str. Hildenborough] gi|120601578|ref|YP_965978.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris DP4] gi|46450609|gb|AAS97256.1| dehydrogenase, FMN-dependent family [Desulfovibrio vulgaris str. Hildenborough] gi|120561807|gb|ABM27551.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris DP4] gi|311234859|gb|ADP87713.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Desulfovibrio vulgaris RCH1] Length = 341 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 99/307 (32%), Gaps = 41/307 (13%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---- 83 + L+H D LG L P+L + + G + M ++ I A Sbjct: 56 NMRLVH------GVSAPDTRTTLLGLDLDMPVLAAPIGGVSFNMGGGVSEEDYIDAIVRG 109 Query: 84 -EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + G F + + + + Sbjct: 110 CNERGLVGCTGDGVPPFIHESGFA--AITAAGGRGIPFVKPWDGDELDQKLDKALATGCK 167 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV---PLLLKEVGCGLSSMD 199 VLG D L L+++ G + ++A + + + +LK + + + D Sbjct: 168 VLGMDVDAAGLITLRKM----GRPVAPKTAEELAAIVTKVHGAGARFILKGI---MCADD 220 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ GG ++ I Sbjct: 221 ALRAAEVGVDAIVVSNHGGRVLDHTPGTAEVLPAIAD-----------------AVKGRL 263 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFL 318 + GG+R+GVD+ K + LGA + PF A+ ++ V + +++L+ + + +M L Sbjct: 264 AVLVDGGVRDGVDVFKMLALGADAVMIGRPFSIAAVGGLAEGVASYVDTLKAQLVQAMIL 323 Query: 319 LGTKRVQ 325 G+ V Sbjct: 324 TGSADVA 330 >gi|160898787|ref|YP_001564369.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160364371|gb|ABX35984.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] Length = 379 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 124/382 (32%), Gaps = 90/382 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L +D S+E G+KLS P+ +S + TG + Sbjct: 29 AYAEQTLRRNVEDLAAVALRQRVLK--DMSRLDTSIELFGEKLSIPVALSPVGLTGMYRR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ + + + V + A K F+L + A Sbjct: 87 RGEV---QAARAADAHGIPFTMSTVSVCPIEEVAPKIKRPMWFQLYVLKDRGFM---QNA 140 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN---------------------- 163 ++ G V + + + + PN Sbjct: 141 LERAQAAGCSTLVFTVDM--PVPGARYRDAHSGMSGPNAAMRRYWQSVTHPAWSMDVGLL 198 Query: 164 -----------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLS 196 G ++ + + + P+++K + L Sbjct: 199 GRPHDLGNISAYRGSPTGLADYIGWLGANFDPSISWKDLEWIRAFWKGPMVIKGI---LD 255 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPY 255 D + ++ G ++ GG + + + +L +A Sbjct: 256 PEDAKDAVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAV 297 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIV 314 + + +A G+RNG+D++++I LGA + F+ S +A V +E L KE V Sbjct: 298 KGQIKILADSGIRNGLDVVRAIALGADCAMIGRAFIYALATSGEAGVKHLLELLEKEMRV 357 Query: 315 SMFLLGTKRVQELYLNTALIRH 336 +M L +V ++ L+R Sbjct: 358 AMTLTSVSKVSDI-TGDLLVRQ 378 >gi|300716812|ref|YP_003741615.1| L-lactate dehydrogenase (cytochrome) [Erwinia billingiae Eb661] gi|299062648|emb|CAX59768.1| L-lactate dehydrogenase (Cytochrome) [Erwinia billingiae Eb661] Length = 413 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 109/361 (30%), Gaps = 75/361 (20%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 GI N + + + + R ++S D G P ++ + GG + + + + Sbjct: 68 GIAGNFEAYQRYAFLPRMFRDVSGR--DQRTTLFGHTYQHPFGVAPL-GGASFVAYQADV 124 Query: 78 NLAIAAEKTKVAMAVGSQRVM---------------------------FSDHNAIKSFEL 110 LA AA + V M + + ++ D A ++ Sbjct: 125 ALAKAAREMNVPMILSASSLVKLEDVHAANPDAWFQAYLAGDQPRIDRLVDRVAAAGYKT 184 Query: 111 RQYAPHTVLISN---------LGAVQLNYDFGVQKAHQAVHVLG--ADGLFLHLNPLQEI 159 T ++ N +++ + A +LG A H P E Sbjct: 185 LVVTGDTPMLGNREHNTRSGFSMPIKITPKVAFESAMSPRWLLGTVAQTFLRHGAPHFEN 244 Query: 160 IQPNGNT-----NFADL-------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + + + L++K + +S D + G Sbjct: 245 TDAERGPPMMSSKVRNTQARDKLNWKNVEAIRKKWRGNLVVKGL---MSPEDAFIARDLG 301 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG P SLE + I G+ Sbjct: 302 ADAVILSNHGGRQLDYT------------------FPPLYSLEEIAAKKGAMKVIIDSGI 343 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA-IESLRKEFIVSMFLLGTKRVQE 326 R G D++K++ LGA L PFL A+ A V + LR E + L+G + E Sbjct: 344 RRGTDVMKAMALGADFVFLGRPFLYGAVIGGQACVEHAMHILRDEIDRDLALIGVRTPGE 403 Query: 327 L 327 L Sbjct: 404 L 404 >gi|311742085|ref|ZP_07715895.1| (S)-2-hydroxy-acid oxidase [Aeromicrobium marinum DSM 15272] gi|311314578|gb|EFQ84485.1| (S)-2-hydroxy-acid oxidase [Aeromicrobium marinum DSM 15272] Length = 345 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 115/343 (33%), Gaps = 60/343 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + + L R L + E D SV LG++ P +++ M Sbjct: 26 AGDELTLRDNVEAWRRIALAPRVL--VDVSERDTSVTVLGRRRPHPFVVAPMA------Y 77 Query: 73 ERINRNLAIA-----AEKTKVAMAVGSQRVMFSDHN-------------AIKSFELRQYA 114 +R A A T + SQ D + F R Sbjct: 78 QRSAHEDAEIGTARAAAATGSTFVLSSQTST--DPRAVAAAGGAADRWMQLYVFRDRGLT 135 Query: 115 PHTVLISNLG---AVQLNYDFGV----QKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGNT 166 V + G A+ + DF + ++ +V+ A + L PL + + Sbjct: 136 DDLVQAAREGSFEALVITVDFPFGGWRDRDRRSGYVVDHAPYVQLSGTPLTPA-ERHAMH 194 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + IA A +P++LK V L D E ++ G ++ GG + Sbjct: 195 DPTLTWDDIAGFGEASGLPIVLKGV---LGPADAERAVQVGAAGIVVSNHGGRQLDTV-- 249 Query: 227 HRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + +L + + GG+R G D K++ LGA Sbjct: 250 ----------------LSGAAALPAVVDAVAGRIDVLVDGGVRRGWDAAKALALGADAVM 293 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P L A + SD +E L EF ++ LLG R ++L Sbjct: 294 VGRPVLWGLACEGSDGARRVLEQLVTEFDSTLGLLGCPRAEDL 336 >gi|111656782|ref|ZP_01407651.1| hypothetical protein SpneT_02001936 [Streptococcus pneumoniae TIGR4] Length = 338 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 110/349 (31%), Gaps = 65/349 (18%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + N + F+ ++ L + + +EF G+KLS P++++ + ++ Sbjct: 6 LRENIRAFNHKLIVPHTL--CNVENPSTEIEFAGEKLSSPIIMAPVA------AHKLANE 57 Query: 79 LAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV---LISNLG 124 A V ++ S + F+ + ++ + Sbjct: 58 QGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRHIMDRVK 117 Query: 125 A-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL-- 177 A + L D V ++ V + + ++E + P G D K A Sbjct: 118 AEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVYKSAKQR 175 Query: 178 --------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++ +P+ +K C D+E L +G + GG + D Sbjct: 176 LSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDGGPAAFD 232 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 ++ + G+R G + K++ GA L + P Sbjct: 233 SLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADLVAIGRP 275 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + A+ S V E L E M L GT+ +++ L N Sbjct: 276 VIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 324 >gi|307328187|ref|ZP_07607366.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] gi|306886174|gb|EFN17181.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] Length = 830 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 109/340 (32%), Gaps = 52/340 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM---TGGNN 69 ++ + N FD L R L E DPS LG++ P+ ++ M T + Sbjct: 40 AGEERTLAANLAAFDRTRLSPRVL--TGVGECDPSTTVLGRRWGAPVAVAPMAYHTLMHP 97 Query: 70 KMIERI-----------------NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 R A A + + Q F D + + L + Sbjct: 98 DGETATARAAGAAGLPLVVSTFAGRTFAEIAAAAGSPLWL--QVYCFRDRDT--TRRLIE 153 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQP----NGNTN 167 +A + + V + + L + +L Q + P + Sbjct: 154 HAAAAGFEALVLTVDTPRLGRRLRDLRNDFRLPPHIVPANLPADQADYSSPSEHGRTGLD 213 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + S IA L S +P+L+K V L++ D + +G ++ GG + Sbjct: 214 PSLDWSVIAWLRSVGQLPVLVKGV---LTAEDARRAIDAGADGIVVSNHGGRQLDGAPAT 270 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ + I + GG+R G D+L ++ LGA L Sbjct: 271 LDVLARIAA-----------------AVDGRCPLLMDGGVRRGRDVLGALALGADAVLLG 313 Query: 288 SPFLKPAMDSSDAVVAAIESL-RKEFIVSMFLLGTKRVQE 326 P L + A + L E +M L GT V + Sbjct: 314 RPVLHGLAVAGADGAAGVLDLVLDELSEAMTLTGTATVAD 353 >gi|146309797|ref|YP_001174871.1| L-lactate dehydrogenase [Enterobacter sp. 638] gi|166990703|sp|A4W540|LLDD_ENT38 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|145316673|gb|ABP58820.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterobacter sp. 638] Length = 395 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLTGAKTISEISK 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|332716589|ref|YP_004444055.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] gi|325063274|gb|ADY66964.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] Length = 382 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 117/380 (30%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL------------ 60 + RN F++ L+ L +VD SV +G+KL+ P+ Sbjct: 32 ADDEVTYRRNTAAFENCDLVPDVLRG--VADVDMSVTVMGQKLAMPVYCSPTALQRLFHH 89 Query: 61 -----ISSMTG-------------GNNKMIERI-----------------NRNLAIAAEK 85 +++ G + + RI NR++ A+ Sbjct: 90 QGERAVAAAAGKFGTMFGVSSLGTTSLEEARRISGGPQVYQFYFHKDRGLNRDMMARAKT 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQ-----LNYDFGVQK 136 V + V S + + F + + + + + F + + Sbjct: 150 AGVQTMMLTVDSITGGNRERDKRTGFAIPFKLNLSGIAQFAIKPAWGINYLTHESFSLPQ 209 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + L + E++ P + +A + P LK V +S Sbjct: 210 LDGHIKM-DGGALSIS-RYFTEMLDP------SMTWDDVAQMVREWGGPFCLKGV---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + G ++ GG S D ++I Sbjct: 259 VEDARRAVDIGCSGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E +R E Sbjct: 302 DRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALELMRIEIERG 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V +L R Sbjct: 362 MKLMGCTTVDQLTRRNLRFR 381 >gi|152972455|ref|YP_001337601.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897049|ref|YP_002921795.1| L-lactate dehydrogenase [Klebsiella pneumoniae NTUH-K2044] gi|329996840|ref|ZP_08302599.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] gi|166990706|sp|A6TFK0|LLDD_KLEP7 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|150957304|gb|ABR79334.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549377|dbj|BAH65728.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539251|gb|EGF65279.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] Length = 394 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 33/188 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDITILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K ++E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGAKSIREISR 372 Query: 330 NTALIRHQ 337 ++ + + Sbjct: 373 DSLVQNAE 380 >gi|119387599|ref|YP_918633.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] gi|119378174|gb|ABL72937.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] Length = 379 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 108/374 (28%), Gaps = 91/374 (24%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + R + D L R L LG++ PL+I+ T + ++ Sbjct: 31 DEVSLARIRASLDGVRLRPRILNGDCPA--SLETTLLGRRHPTPLVIAP-TALAGMVADK 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 LA AA + + V +Q V + ++R+ AP L L V + Sbjct: 88 GETKLARAASRFGIPFTVSTQSVEPVE-------DIRRGAPDAELWFQL-YVWKDRARTA 139 Query: 135 QKAHQAVHVLGADGLFLHLN----PLQEIIQPNG--------------NTNFADLSSKI- 175 + + V D L L ++ P +E Q NG ++ Sbjct: 140 ELLRR-VAACDCDTLVLTVDTQMPPKREYNQRNGFGVPFRPTPGNVADMLCHPRWLWEVI 198 Query: 176 ----------------ALLSSAMDVPLLLKE------------------------VGCGL 195 + + P+ +E + L Sbjct: 199 LRPGLRRGMPSYGHYPPEFRAGLLSPVTAEELRLDPALTWQDFRALRDGWQGRIILKGVL 258 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + D G ++ GG ++ + T +L Sbjct: 259 GTEDAMRAKAEGADAIVVSTHGGRNFDALP------------------TTAEALPRIAAN 300 Query: 256 CNEAQ-FIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFI 313 +A G+R G D+LK + LGAS L P A +E + E Sbjct: 301 PAAVPELLADSGVRRGSDVLKYLALGASAVQLGRAPLWGLAAGGETGAATLLEIILAEMR 360 Query: 314 VSMFLLGTKRVQEL 327 M LG + + +L Sbjct: 361 TGMGFLGARTLADL 374 >gi|332971151|gb|EGK10115.1| L-lactate dehydrogenase [Psychrobacter sp. 1501(2011)] Length = 412 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 65/371 (17%), Positives = 122/371 (32%), Gaps = 71/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ + P+ I+ TG M Sbjct: 45 QTTYRNNETDFDRIKLRQRVL--VDMDNRSLATQMIGEDVKMPIAIAP-TGFTGMMWANG 101 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI-----SN 122 + A AA+ V ++ + + + A + + +R LI +N Sbjct: 102 EMHAAKAAKDFGVPFSLSTMSICSIEDVAEYTNHPFWFQLYVMRDQDFMANLIRRAKAAN 161 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL- 171 A+ L D V Q+ + L A N L + +P + F ++ Sbjct: 162 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLANILNLMTKPEWCFNMLGAKSRTFGNIV 221 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L++K + + D + +S Sbjct: 222 GHAKGVGDLSSLSSWTSEQFDPSLSWEDVARIKDMWGGKLIIKGI---MEPEDAVMAARS 278 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S +DI ++ + + + G Sbjct: 279 GADALVVSNHGGRQLDGAPSSIACLADI--------------VQAVQAENSNIEIWLDSG 324 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+I LGA + FL D V A+E L E ++M G + Sbjct: 325 IRSGQDVLKAIALGAKGTMIGRSFLYGLGAYGEDGVRRALEILYNECDITMAFCGHTNIN 384 Query: 326 ELYLNTALIRH 336 + + L++ Sbjct: 385 NV-TDDILVKG 394 >gi|329119448|ref|ZP_08248133.1| L-lactate dehydrogenase [Neisseria bacilliformis ATCC BAA-1200] gi|327464381|gb|EGF10681.1| L-lactate dehydrogenase [Neisseria bacilliformis ATCC BAA-1200] Length = 428 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 119/365 (32%), Gaps = 73/365 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N F R L ++ + E +G+K+ PL I+ TG Sbjct: 75 QHTYRANTTDFAPIEFRQRVL--VNMEGRSLESEMIGQKVKMPLAIAP-TGFTGMAWADG 131 Query: 76 NRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLIS---N 122 + A AAEK V ++ + + + + +A F+L R++ + + + Sbjct: 132 EIHAARAAEKFGVPFSLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAQDAK 191 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGA-----DGLFLHLNPLQEIIQPNGN---TNFADL- 171 A+ L D V Q+ + L A ++L E + F ++ Sbjct: 192 CSALILTADLQVLGQRHKDIKNGLSAPPKPTIMNCINLATKWEWCWNMLHTERRTFRNIV 251 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L++K + + D EL +K Sbjct: 252 GHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAELAVKH 308 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S D D+ + ++ + G Sbjct: 309 GADAIVVSNHGGRQLDGAPSTIDALPDV-----------------VQAVGSQTEVWLDSG 351 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+ +GA FL D V A+E + E V+M G + + Sbjct: 352 IRSGQDMLKAWAMGARGFLTGRAFLYGLGAYGEDGVRRALEIMYNEMDVTMAFTGHRNLS 411 Query: 326 ELYLN 330 E+ N Sbjct: 412 EVDKN 416 >gi|85813709|emb|CAH18566.1| putative L-lactate dehydrogenase, TobD3 [Streptoalloteichus tenebrarius] Length = 358 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 121/344 (35%), Gaps = 58/344 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ID N +D L+ R + S E D SV LG+ +S P++++ + + + Sbjct: 26 AGTHRTIDDNAAAYDRIWLLPRGV-RTSTGEPDTSVTLLGRTVSSPVVLAP---TSPQRL 81 Query: 73 ERINRNLA------------------------IAAEKTKVAMA-VGSQRVMFSDHNAIKS 107 + LA IAAE ++ + R S + + Sbjct: 82 VHPDAELATARAARARDVLSIVSTDTHHAFPEIAAEAPGLSWFQLYGYR---SREDVAAT 138 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAH-QAVHVLGADGL-FLHLNPLQEIIQPNGN 165 EL + T L+ + A ++A + + L L + + Sbjct: 139 VELAERGGATALVVTVDASYSARRISTRRAGFRLPDDVDYGTLRALGVLDGAAPASGRLD 198 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 +A + S +P+L+K V L D ++ G ++ GG Sbjct: 199 RLPVTWDD-LAWIRSLTTLPVLVKGV---LRPEDALRCVELGAEGVIVSNHGGRQLDGA- 253 Query: 226 SHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +P+ ++L +AR + GG+R+GVD++K++ LGA Sbjct: 254 -----------------LPSLVALDRIARVLPRGRTLLVDGGVRSGVDVVKALALGAHAV 296 Query: 285 GLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P+L ++ V ++ E ++ LG V EL Sbjct: 297 CVGRPYLWGLGLNGQKGVEQVLDVFDVEVRDALRQLGVSSVSEL 340 >gi|325499154|gb|EGC97013.1| L-lactate dehydrogenase [Escherichia fergusonii ECD227] Length = 396 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 114/372 (30%), Gaps = 75/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYAEYTLRRNVEDLSQVALRQRVLK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLISN 122 R A AA+ + + + + + LR + + + + Sbjct: 86 RRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAK 145 Query: 123 L---GAVQLNYDFGVQKAHQAVH---VLGADGLFLH-----------------------L 153 + D A + G + Sbjct: 146 AAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLG 205 Query: 154 NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + +P G ++ + + + D P+++K + L D Sbjct: 206 NISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + + +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+D+++ I LGA L +L A V + + KE V+M L G Sbjct: 305 ADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 K + E+ ++ + Sbjct: 365 KSISEISQDSLV 376 >gi|218550883|ref|YP_002384674.1| L-lactate dehydrogenase [Escherichia fergusonii ATCC 35469] gi|259494984|sp|B7LTL2|LLDD_ESCF3 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|218358424|emb|CAQ91071.1| L-lactate dehydrogenase, FMN-linked [Escherichia fergusonii ATCC 35469] gi|324111935|gb|EGC05915.1| FMN-dependent dehydrogenase [Escherichia fergusonii B253] Length = 396 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 114/372 (30%), Gaps = 75/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYAEYTLRRNVEDLSQVALRQRVLK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLISN 122 R A AA+ + + + + + LR + + + + Sbjct: 86 RRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAK 145 Query: 123 L---GAVQLNYDFGVQKAHQAVH---VLGADGLFLH-----------------------L 153 + D A + G + Sbjct: 146 AAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLG 205 Query: 154 NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + +P G ++ + + + D P+++K + L D Sbjct: 206 NISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + + +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+D+++ I LGA L +L A V + + KE V+M L G Sbjct: 305 ADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 K + E+ ++ + Sbjct: 365 KSISEISQDSLV 376 >gi|293394637|ref|ZP_06638929.1| L-lactate dehydrogenase [Serratia odorifera DSM 4582] gi|291422763|gb|EFE96000.1| L-lactate dehydrogenase [Serratia odorifera DSM 4582] Length = 379 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 113/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + E+ G+KL+ P++++ + TG + Sbjct: 29 AYAEHTLRRNTADLADIALRQRILK--NMSELSLETTLFGEKLAMPVILAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLF-----------------LHLNP-- 155 Q D V A + G + +H P Sbjct: 144 AQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRVWQAMTHPQWAWDVGIHGKPHD 203 Query: 156 ---LQEIIQ-PNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + P ++ + + P+++K + L D Sbjct: 204 LGNVSAYRGTPTNLEDYIGWLGANFDPSISWQDLEWIREFWQGPMIIKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + T +L +A + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPAIADAVKGDIA 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 + G+RNG+D+++ I LGA L F+ A V + + KE V+M L Sbjct: 303 ILTDSGIRNGLDVVRMIALGADSVMLGRAFVYALAAAGEAGVANLLSLIDKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 G K + ++ Sbjct: 363 GAKSIGDI 370 >gi|159896762|ref|YP_001543009.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Herpetosiphon aurantiacus ATCC 23779] gi|159889801|gb|ABX02881.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Herpetosiphon aurantiacus ATCC 23779] Length = 364 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 107/355 (30%), Gaps = 66/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F+ L R L + EV + LGK L P+L++ Sbjct: 30 CEDEVTLRANLLSFEQVRLRPRFL--VDVREVSTATTLLGKPLDSPILVAP------SAY 81 Query: 73 ERINRNLAIAAEKTKVAMAVG----SQRVMFSDHNAIKS-----------FELRQYAPHT 117 + VA A S S + + R + Sbjct: 82 HGLAHAEGECETARGVAQAGSIFTVSTLATRSLEEVAAAAECPLWFQLYVYRDRSVSERL 141 Query: 118 VLISNLGAVQ-----------------LNYDFGVQKAHQAVHVLGADGLFLHLNPL-QEI 159 + + Q L FGV + + + Sbjct: 142 IARAEAAGYQALMLTIDRPWLGRRERELRSGFGVPAHLSMANFRDVPAAQNYRRAGPNAL 201 Query: 160 IQPNGNTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 P + A L IA L S +P+++K + L++ D L ++G ++ GG Sbjct: 202 PDPKADMFDAGLTWESIAWLRSVTSLPIIVKGI---LTAEDALLAAEAGAAAIVVSNHGG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ--FIASGGLRNGVDILKS 276 + T +L ++ GG+R G D LK+ Sbjct: 259 RQIDGT------------------VTTLEALPEVVAALAQSPCEIYIDGGIRRGSDALKA 300 Query: 277 IILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + LGA L P L A+ S V + ++++E SM L G + + + Sbjct: 301 LALGAQAIMLGRPVLWGLAVAGSAGVADVLTTMQRELQRSMALCGRPNLASIDRS 355 >gi|119504472|ref|ZP_01626551.1| L-lactate dehydrogenase (cytochrome) protein [marine gamma proteobacterium HTCC2080] gi|119459494|gb|EAW40590.1| L-lactate dehydrogenase (cytochrome) protein [marine gamma proteobacterium HTCC2080] Length = 384 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 106/366 (28%), Gaps = 74/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN ++D L+ L ++D SVE +G+KL PL + T Sbjct: 32 ADDELTYRRNTAAYEDVDLVPNVLRG--VADIDTSVEVMGQKLDMPLFCAP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSD-------HNAIKSFELRQYAPHTVLISNLG 124 R +A AA + V S V + + + + + L+ Sbjct: 89 HDGERAVAKAATEYGTMFGVSSLATVTVEEIAELAPGPKLFQFYFHKDRGLNNALLERAR 148 Query: 125 AVQLNY-DFGVQKA------------------------------------HQAVHVLGAD 147 A N V Sbjct: 149 AANFNVMALTVDTITGGNRERDLRTGFTSPPKLNLSSMWSFATHPAWAWNFFTGDKFDMP 208 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIAL-----LSSAMDVPLLLKEVGCGLSSMDIEL 202 L H+N + G+ L ++ L + + LK + +S D E Sbjct: 209 HLSGHINEGTNVAVSVGDYFSTMLDPTMSWDDAEKLCAQWNGQFALKGI---MSVEDAER 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G ++ GG + D +I ++ I Sbjct: 266 AVDIGCTGIMVSNHGGRQLDGSRAPFDQLEEI-----------------CDAVGDKIDVI 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG++ G +LK++ GA +L A V A+ + + E M L+G Sbjct: 309 CEGGIQRGTHVLKALSAGAKAVSGGRLYLYALAAAGQAGVERALGNFKTEIERDMRLMGV 368 Query: 322 KRVQEL 327 +R+ EL Sbjct: 369 QRIDEL 374 >gi|327192094|gb|EGE59072.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 395 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 119/364 (32%), Gaps = 75/364 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L ++S + GK + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFRPRVLRDVSTR--STATSLFGKTHAVPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFS-----------------DHNAIKSFELRQYAP-- 115 + LA A+++ + M + GS + + + I + R A Sbjct: 104 DIVLAQGADQSGMPMIISGSSLIPLEEIAAASPQAWFQAYLPGEPDRIDALIDRVAAAGI 163 Query: 116 HTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLNPLQ 157 T+L++ A N + V+ + + H P Sbjct: 164 DTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTLLRTIARHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F S + + L++K + + D Sbjct: 224 ENSYATRGAPIISSNVTRDFGKRDHLNWSHLERIRKRWSGKLVVKGI---MHPEDAARAA 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAA-----------------RVGDSIAVMVD 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG Sbjct: 324 GGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGLPGVLRAADILKTELYSNMALLGVTS 383 Query: 324 VQEL 327 V ++ Sbjct: 384 VGDI 387 >gi|225076498|ref|ZP_03719697.1| hypothetical protein NEIFLAOT_01544 [Neisseria flavescens NRL30031/H210] gi|224952177|gb|EEG33386.1| hypothetical protein NEIFLAOT_01544 [Neisseria flavescens NRL30031/H210] Length = 390 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 118/366 (32%), Gaps = 83/366 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L + + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VDMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLIS-- 121 + A AAEK + + + + + + ++ F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSSPFWFQLYVMRDREFMENLIKRAKD 151 Query: 122 -NLGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGN---TN 167 N A+ L D V + + A+ + L P E N Sbjct: 152 ANCSALVLTADLQV-LGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRT 208 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F ++ +A + L++K + + D E Sbjct: 209 FRNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAE 265 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +SG ++ GG S DI ++ + Sbjct: 266 RAARSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G DILK+ LGA + FL + V A+E L KE VSM G Sbjct: 309 WMDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTG 368 Query: 321 TKRVQE 326 + +Q+ Sbjct: 369 HRNIQD 374 >gi|320168155|gb|EFW45054.1| peroxisomal glycolate oxidase [Capsaspora owczarzaki ATCC 30864] Length = 372 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 116/360 (32%), Gaps = 69/360 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLG--KKLSFPLLISSMTGGNNK 70 + N+ F + R L +VD V L + L+ P+ I+ + Sbjct: 33 ANDQRTLAENRAAFYRLRFLPRIL--RDVSQVDLGVSLLNGTQTLASPICIAPTA---MQ 87 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHN------------AIKSFELRQYAPHTV 118 + + +A A E M + S + + + R V Sbjct: 88 RMAHPDGEIATARESL---MILSSWSTTSIEDVAAANGNAGARWFQLYVYRDRAVTAQLV 144 Query: 119 LISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNG----NTNF 168 + A+ L D + + + L HL N + + G + Sbjct: 145 KRAEQSGYTALVLTVDTPI-LGRREADIRNGFRLPPHLRLANFSETDSKATGVSITDKKD 203 Query: 169 ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + L + L S +P++LK V LS D L + G++ ++ Sbjct: 204 SGLAAYVAAQIDQTLTWKDVKWLQSITKLPIILKGV---LSPEDATLAVDHGVQGILVSN 260 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 G + + + GI + GG+R G D+L Sbjct: 261 HGARQLDGVPATIEALP---------GI--------VAAVGSRCDVYLDGGVRRGTDVLM 303 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + P L A + V A+ L++E ++M L G ++ +L +L+ Sbjct: 304 ALALGAKAVFVGRPVLWGLAYKGEEGVQIALTLLQQELKLAMQLAGCSKLADL--TPSLV 361 >gi|48478084|ref|YP_023790.1| lactate 2-monooxygenase [Picrophilus torridus DSM 9790] gi|48430732|gb|AAT43597.1| lactate 2-monooxygenase [Picrophilus torridus DSM 9790] Length = 384 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 116/373 (31%), Gaps = 87/373 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F + + R L +D S+ GK+ P ++ + G + + Sbjct: 48 AGSNDTEKNNERSFLKYRIRPRYL--RDVSNIDMSIRLFGKRFETPFILGPI-GVTSIIH 104 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFELRQYAPHTVLISNLGAV 126 + +A AAE + A+ + D NA + F+L ++ S + Sbjct: 105 NDGDIAIAKAAENLGMPFALSTVSSYSIEDVAKAAPNAERWFQLYPGRDKNIMKSMIRRA 164 Query: 127 QLN----------------------------------------YDFGVQKAHQAVHVLGA 146 + + +F + + A Sbjct: 165 EKSGYSAIIVTVDTTMLGWRETDLKNAYLPFLLGYGIANYITDPEFNARLDKSPEEDMNA 224 Query: 147 ---DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + L +++NP F + + S +PL++K + D++ Sbjct: 225 AIEEFLSIYVNPG-----------FTW--DDFSEIRSWTRLPLIIKGITHI---DDVKKA 268 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 I+ GG I + +L + Sbjct: 269 FDYNADAVVISNHGGRQVDGA------------------ISSIDALHELSLNDINGTILF 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+ D K+I LGAS + P++ A+ + ++ LR EF + M L G Sbjct: 311 DSGIRHAADAFKAIALGASAVLIGRPYIYALAVAGQAGIERYMDQLRSEFNLEMALSGYG 370 Query: 323 RVQELYLNTALIR 335 + EL T ++ Sbjct: 371 SLSELNRETIYVQ 383 >gi|93006713|ref|YP_581150.1| L-lactate dehydrogenase (cytochrome) [Psychrobacter cryohalolentis K5] gi|92394391|gb|ABE75666.1| L-lactate dehydrogenase (cytochrome) [Psychrobacter cryohalolentis K5] Length = 402 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 124/372 (33%), Gaps = 73/372 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N+ FD L R L ++ + + E LG + P+ I+ TG M Sbjct: 36 ETTYRNNETDFDRIKLRQRVL--VNMEGRSLATEMLGTPVKMPVAIAP-TGFTGMMWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL------- 123 A AAE V ++ + + + A + F+L I+NL Sbjct: 93 EILAAQAAENFGVPFSLSTMSICSIEDVATHTSQPFWFQL-YMMRDMDFIANLIRRAKEA 151 Query: 124 --GAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL 171 A+ L D V Q+ + L A N L + +P F ++ Sbjct: 152 NCSALILTADLQVLGQRHKDIKNGLSAPPKPTLANILNLMTKPEWCMNMLQTRRRTFGNI 211 Query: 172 --------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 +A + L++K + + D + + Sbjct: 212 VGHAKNVEDISSLSAWTAEQFDPALSWDDVARIKDMWGGKLIIKGI---MEPEDAIMAAR 268 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 SG ++ GG S SDI ++ R ++ + Sbjct: 269 SGADALVVSNHGGRQLDGAPSSISSLSDI--------------VQAVRAEDSQIEVWLDS 314 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ LGA+ + FL D V A+E + E +SM G + Sbjct: 315 GIRSGQDVLKAMALGANGTMIGRAFLYGLGAYGEDGVRRALELIYNECDISMAFCGHTDI 374 Query: 325 QELYLNTALIRH 336 E+ + L++ Sbjct: 375 NEVR-DDILVKG 385 >gi|295397513|ref|ZP_06807595.1| L-lactate oxidase [Aerococcus viridans ATCC 11563] gi|118138668|pdb|2J6X|A Chain A, The Crystal Structure Of Lactate Oxidase gi|118138669|pdb|2J6X|B Chain B, The Crystal Structure Of Lactate Oxidase gi|118138670|pdb|2J6X|C Chain C, The Crystal Structure Of Lactate Oxidase gi|118138671|pdb|2J6X|D Chain D, The Crystal Structure Of Lactate Oxidase gi|118138672|pdb|2J6X|E Chain E, The Crystal Structure Of Lactate Oxidase gi|118138673|pdb|2J6X|F Chain F, The Crystal Structure Of Lactate Oxidase gi|118138674|pdb|2J6X|G Chain G, The Crystal Structure Of Lactate Oxidase gi|118138675|pdb|2J6X|H Chain H, The Crystal Structure Of Lactate Oxidase gi|294974243|gb|EFG49988.1| L-lactate oxidase [Aerococcus viridans ATCC 11563] Length = 374 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 104/315 (33%), Gaps = 49/315 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-VM 98 + D S E LG K+ P +++ + + A A + M++ + Sbjct: 70 DVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTK-EAGTARAVSEFGTIMSISAYSGAT 128 Query: 99 FSDHNAI-----KSFEL----------------RQYAPHTVLISNLGAVQLNYDFGVQKA 137 F + + + F++ + ++++ V N D V+ Sbjct: 129 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKN- 187 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + V+ G + +L E + N G + I +++ +P+ +K + Sbjct: 188 -KFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAAHSGLPVFVKGIQH- 245 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D ++ +K+G ++ G D I Sbjct: 246 --PEDADMAIKAGASGIWVSNHGARQLYEAPGSFDTLPAIAE-----------------R 286 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFI 313 + G+R G + K++ GA + L P L A+ + ++ +K+ Sbjct: 287 VNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLT 346 Query: 314 VSMFLLGTKRVQELY 328 M L G++ V++L Sbjct: 347 RVMQLTGSQNVEDLK 361 >gi|1478355|gb|AAB36100.1| L-lactate oxidase, LOX [Aerococcus viridans, IFO12219, Peptide, 371 aa] Length = 371 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 104/315 (33%), Gaps = 49/315 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-VM 98 + D S E LG K+ P +++ + + A A + M++ + Sbjct: 67 DVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTK-EAGTARAVSEFGTIMSISAYSGAT 125 Query: 99 FSDHNAI-----KSFEL----------------RQYAPHTVLISNLGAVQLNYDFGVQKA 137 F + + + F++ + ++++ V N D V+ Sbjct: 126 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKN- 184 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + V+ G + +L E + N G + I +++ +P+ +K + Sbjct: 185 -KFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAAHSGLPVFVKGIQH- 242 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D ++ +K+G ++ G D I Sbjct: 243 --PEDADMAIKAGASGIWVSNHGARQLYEAPGSFDTLPAIAE-----------------R 283 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFI 313 + G+R G + K++ GA + L P L A+ + ++ +K+ Sbjct: 284 VNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLT 343 Query: 314 VSMFLLGTKRVQELY 328 M L G++ V++L Sbjct: 344 RVMQLTGSQNVEDLK 358 >gi|221134143|ref|ZP_03560448.1| L-lactate dehydrogenase [Glaciecola sp. HTCC2999] Length = 379 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 114/367 (31%), Gaps = 83/367 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + + N D L + L E+ + G+KLS P+++S + TG + E Sbjct: 32 ETTLKNNVSDLQDIALKQKVL--NDMSELSLEHDVFGEKLSMPVVLSPVGLTGMYARRGE 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL 123 A AAEK + + + + + L R++ + + + Sbjct: 90 V---QAAKAAEKMGIPFTMSTVSVCPIEEVTPAIKRPMWFQLYVLKDREFMKNVLERAKA 146 Query: 124 GAVQ---LNYDFGVQKAH---QAVHVLGADGLFLHLNPLQEIIQP--------------- 162 V D A + G F + +Q + P Sbjct: 147 AGVTTLVFTVDMPTPGARYRDMHSGMSGPYAEFRRV--MQAVAHPSWAMDVGLLGKPHDL 204 Query: 163 ----------NGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ + + D PL++K + L D + Sbjct: 205 GNISAYRNKTTKLGDYIGWLGDNFDTSISWQDLEWIREFWDGPLIIKGI---LDVEDAKD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIVVSNHGGRQLDGV------------------MSSAKALPLIADAVKGDIKL 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G+D+++ + LGA L ++ A V + + E V+M L G Sbjct: 304 FVDSGIRSGLDVVRMLALGADCTMLGRSYIYALAARGQQGVEHLLSLYQNEIRVAMTLTG 363 Query: 321 TKRVQEL 327 K + E+ Sbjct: 364 AKSIGEI 370 >gi|227112792|ref|ZP_03826448.1| L-lactate dehydrogenase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 377 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 114/372 (30%), Gaps = 75/372 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + L R L + + LS P++++ + G Sbjct: 29 AYAEYTLRHNVEDLSQVALRQRVL--NDMSALSLETRLFNETLSMPVVLAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQ--YAPHTVLISN 122 R A AA+ + + + + + LR + + + + Sbjct: 86 RRGEVQAAQAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAK 145 Query: 123 L---GAVQLNYDFGVQKAHQAVH---VLGADGL-------FLH----------------L 153 + D A + G + H Sbjct: 146 AAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLG 205 Query: 154 NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + +P G ++ +K + + D P+++K + L D Sbjct: 206 NISAYLGKPTGLEDYIGWLAKNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + + +L +A + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+D+++ I LGA L +L A + V + + KE V+M L G Sbjct: 305 ADSGVRNGLDVVRMIALGADSVLLGRAYLYALATHGREGVANLLTLIEKEMRVAMTLTGA 364 Query: 322 KRVQELYLNTAL 333 K ++ + ++ + Sbjct: 365 KSIKTITRDSLV 376 >gi|86357474|ref|YP_469366.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86281576|gb|ABC90639.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 395 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 122/367 (33%), Gaps = 75/367 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + F + R L ++S G + P I+ M G + M R Sbjct: 47 NASLRHNAEAFQAYAFRPRVLRDVSRR--STETSLFGNTHAAPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFSDHNAI---KSFELR-QYAPHTVL-------ISNL 123 + LA A+++ + M + GS + + A+ F+ P + + + Sbjct: 104 DIVLAQGADRSGIPMIISGSSLIPLEEIAAVSPQAWFQAYLPGEPDRIDALIDRVAAAGI 163 Query: 124 GAVQLNYDF--------------------GVQKAHQAVHVLG------ADGLFLHLNPLQ 157 G + L D G++ A Q + + H P Sbjct: 164 GTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIVRHGIPHF 223 Query: 158 E---------IIQPNGNTNF--ADLSS--KIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F D + + + L++K + + D Sbjct: 224 ENSYATRGAPIISSNVTRDFGKRDHLNWSHLERIRKRWSGKLVVKGI---MHPDDAARAA 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + +I + + Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIAA-----------------SVGDSIAVMID 323 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DI+K++ LGA + PFL A+ V+ A + L+ E +M LLG R Sbjct: 324 GGIRRGTDIMKALALGACFVFVGRPFLYAAAVAGLPGVLRAADILKAELHSNMALLGVTR 383 Query: 324 VQELYLN 330 V ++ + Sbjct: 384 VTDISTD 390 >gi|195028821|ref|XP_001987274.1| GH20058 [Drosophila grimshawi] gi|193903274|gb|EDW02141.1| GH20058 [Drosophila grimshawi] Length = 364 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 115/329 (34%), Gaps = 61/329 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 + D S + LG++ +P+ I+ + + + + A AA K + + Sbjct: 54 DVSQPDISCQILGQQQKWPVGIAPTA---MQKMAHPDGEIGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 D + K F+L Y ++ +N A+ L D + H+ V Sbjct: 111 TSLEDLAAGAPDTHKWFQLYIYKDRSLTKKLVHRAEKANFKALVLTIDAPI-FGHRRSDV 169 Query: 144 LGADGLFLHLNPL------------------QEIIQPNGNTNFADLSSKIALLSSAMDVP 185 L HL+ E + + + I L +P Sbjct: 170 RNKFSLPSHLSLANFQGEQANGVVTMGGSGINEYVVNQFDPSITW--KDINWLKQLTSLP 227 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +++K V L++ D L + G ++ G + + + ++ Sbjct: 228 IIVKGV---LTAEDAVLAREFGCAGIIVSNHGARQIDTVPASIEALPEV----------- 273 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAA 304 + + + GG+ G DI K++ LGA + P + A + V Sbjct: 274 ------VKAVGKDLLVMLDGGIMQGNDIFKALALGAKTVFIGRPAVYGLAYNGERGVEEL 327 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + LRK+F ++M L+G ++++++ N + Sbjct: 328 LSVLRKDFEITMALIGCQKLKDIQSNMVV 356 >gi|226310686|ref|YP_002770580.1| oxidoreductase [Brevibacillus brevis NBRC 100599] gi|226093634|dbj|BAH42076.1| putative oxidoreductase [Brevibacillus brevis NBRC 100599] Length = 381 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + IA L +P+L+K + L D L L+ G+ ++ GG Sbjct: 237 WNDIAFLREHTHLPILVKGI---LHPDDARLALEHGVDGIIVSNHGGRQMDGA------- 286 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I T +L +A + + G+R G D++K+I LGA+ + PF Sbjct: 287 -----------ISTLDALPAIAEVIAGKIPLLLDSGVRTGADVVKAIALGANAILIGRPF 335 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A+ V + +++L EF V+M L G+ + +L + Sbjct: 336 LYGLAVAGEQGVTSVLDTLIHEFDVAMALSGSNSIADLNRS 376 >gi|261341785|ref|ZP_05969643.1| hypothetical protein ENTCAN_08267 [Enterobacter cancerogenus ATCC 35316] gi|288316156|gb|EFC55094.1| L-lactate dehydrogenase [cytochrome] [Enterobacter cancerogenus ATCC 35316] Length = 395 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLDLIEKEMKVAMTLTGAKSISEISK 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|163791169|ref|ZP_02185587.1| L-Lactate oxidase [Carnobacterium sp. AT7] gi|159873564|gb|EDP67650.1| L-Lactate oxidase [Carnobacterium sp. AT7] Length = 372 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 111/352 (31%), Gaps = 64/352 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + +N + + ++ R L + D S L + P +++ + Sbjct: 48 DEFTLKQNNEAWSHKGILPRVLA--DVENPDTSTSILEHDIKVPFIMAPIA------AHG 99 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY----APHTVLISNLGAVQLNY 130 + A +A G+ + + A +FE + +P I ++N Sbjct: 100 LAHETKEAGTAKGIAEFGGTIMSISAYSGA--TFEEIEDGLKGSPRWFQIYMSKDDEMNK 157 Query: 131 DFGVQKAHQ--AVHVLGADGLFLHLNPLQEII--------QPNGNTNFADLSSKIAL--- 177 + + +A A ++ L N ++++ P + ++L Sbjct: 158 NI-LDEAKSDGATAIILTADSTLSGNREKDMLNKFVYPFGMPIVSRYLTGSGKNMSLNNI 216 Query: 178 ---------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 +S +P+ +K + + D L + +G ++ GG Sbjct: 217 YAQSKQKITPRDVKFISDYSGLPVFVKGIQ---TPEDASLAIGAGAAGIWVSNHGGRQLD 273 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 T S+ ++ + G+R G I K++ GA Sbjct: 274 GAPGS---------------FDTLESI--SKVVAGRVPIVFDSGIRRGEHIFKALASGAD 316 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + P L A+ V + +E + M L GT+ ++++ Sbjct: 317 IVAVGRPVLYGLALGGWKGVKSVLEYFETDLKRVMQLAGTQTIEDVKNARLF 368 >gi|302531055|ref|ZP_07283397.1| L-lactate oxidase [Streptomyces sp. AA4] gi|302439950|gb|EFL11766.1| L-lactate oxidase [Streptomyces sp. AA4] Length = 387 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 118/356 (33%), Gaps = 64/356 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F+ W L+ R + E D SV+ G KL PL ++ + G G Sbjct: 50 AGDERTQRGNVEAFERWGLVPRMF--VGAKERDLSVDLFGMKLPAPLFLAPV-GVIGLCA 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSD---HNAIKS---FEL-----RQYAPHTVL 119 + A A+ +T V M + V + + F+L R A V Sbjct: 107 QDGHGDLATARASARTGVPMVASTLSVDPVETLVPELGDTPGFFQLYTPTDRDLAASLVQ 166 Query: 120 ISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII-----------QPNGN 165 + + + D V + + A+ L + L P + Sbjct: 167 RAEAAGFRGIVVTLDTWV-TGWRPRDLSTANFPQLRGHCLANYFADPVFRKRLGKAPEDD 225 Query: 166 TNFA-DLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 A L + L S +PLL+K + D + G+ + Sbjct: 226 PAAAVGLWAQLFGNPLTWEDLPWLRSLTKLPLLVKGIQH---PDDARRAIDGGVDGIYCS 282 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + G+P L + + G+R+G D++ Sbjct: 283 NHGGRQ------------------ANGGLPALDCLAEVVDAADGTPVLFDSGVRSGADVV 324 Query: 275 KSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 K++ LGA+ G+ P+ ++ D VV + +L E + M + G + +L Sbjct: 325 KALALGATAVGVGRPYAWGLSLAGEDGVVHVLRTLLAEADLIMAVDGYPTLADLTR 380 >gi|222086153|ref|YP_002544685.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] gi|221723601|gb|ACM26757.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] Length = 381 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 115/387 (29%), Gaps = 101/387 (26%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + + RN F++ L+ L VD SV +G+KL+ P S Sbjct: 32 ADDEVTLRRNTTSFENCDLVPNVLRG--VSSVDMSVTVMGQKLATPFYCSPTALQRLFHH 89 Query: 64 ---------------MTGGNNKMI-----------------------ERINRNLAIAAEK 85 M G ++ +NR + A+ Sbjct: 90 QGENAVAAAASSMGTMFGVSSLGTVSLEEVRKKHQGPQVYQFYFHKDRGLNRAMMQRAKD 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL-GAVQL------------N 129 V + V S + + F + NL G Q + Sbjct: 150 AGVNVMMLTVDSITGGNRERDLRTGFSI-------PFKLNLAGLAQFAMKPAWGLNYVTH 202 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 F + + + V + G E++ P+ N +A + LK Sbjct: 203 EKFRLPQLDEHVDMSGGAMSI--GKYFTEMLDPSMN------WDDVAEMVRHWGGQFCLK 254 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V +S D + ++ G ++ GG S D ++I Sbjct: 255 GV---MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQLAEI--------------- 296 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 + + GG++ G +LK++ LGA G+ +L P A V A+ L Sbjct: 297 --VDAVGDRIDVMMDGGIQRGTHVLKALSLGAKAVGVGRFYLYPLAAAGQPGVERALGML 354 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 R E M L+G V +L R Sbjct: 355 RTEIERGMKLMGCTTVDQLSRANLRFR 381 >gi|238021175|ref|ZP_04601601.1| hypothetical protein GCWU000324_01073 [Kingella oralis ATCC 51147] gi|237868155|gb|EEP69161.1| hypothetical protein GCWU000324_01073 [Kingella oralis ATCC 51147] Length = 391 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 113/364 (31%), Gaps = 81/364 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 N F R L + + + LG+++ PL I+ TG + E Sbjct: 39 QTTYHANAADFAPIQFRQRVL--VDMENRSLKTQMLGQEVKMPLAIAPTGLTGMFHADGE 96 Query: 74 RINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYA--------- 114 + A A EK + M++ S + + A F+L R++ Sbjct: 97 ILA---ARACEKFGIPYTLSTMSICSIEDVAENTTAPFWFQLYVMRDREFMADLIRRAKA 153 Query: 115 ----------------------------PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 P ++NL + ++G++ + Sbjct: 154 AQCSALVLTADLQIVGQRHRDIKNGLTVPPRPTLANLINLATKIEWGLKMLNTRRRTFR- 212 Query: 147 DGLFLHLNP---LQEII-QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + H L E++ + IA + L++K + L D E Sbjct: 213 -NIAGHAKDVTNLSELMPWVAKQFDPKLSWDDIAHIKDLWGGKLIIKGI---LDPEDAEK 268 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++ G ++ GG S I + ++ + Sbjct: 269 AVQHGADAIIVSNHGGRQLDGAPSSIRALPAI-----------------IQAVGSQTEVW 311 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R G DILK+ LGA + P+L A V A+E L E +SM G Sbjct: 312 LDGGIRTGQDILKAWALGARGTFIGRPYLYGLAAYGEAGVTRALEILYNEMDLSMAFTGH 371 Query: 322 KRVQ 325 + +Q Sbjct: 372 RDIQ 375 >gi|227498598|ref|ZP_03928742.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904054|gb|EEH89972.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 337 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 109/321 (33%), Gaps = 50/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR--- 77 RN + + ++ L E E D + G ++P + ++ N Sbjct: 46 RNYQAWQTVRVVMDTLCE--KRETDTRLSLFGHSFAYPFFAGPVGAVAMHYSDKYNDVTY 103 Query: 78 --NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 L ++ + G E+ + A + + + +Q Sbjct: 104 NAQLVPGCAESGILAFTGDGMDA----------EVMRGATDAIKDCQGVGIPTVKPWNMQ 153 Query: 136 KAHQAVHVLGADGL--------FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + + ++ A G L L++ + P G+ + ++ + + DVP + Sbjct: 154 MIREKMDLVKASGALAVAMDVDAAGLPFLKKFVPPAGSKS----VEEMKEIIALTDVPFI 209 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 +K + +S ++G ++ GG + + ++ +I Sbjct: 210 VKGI---MSVKGAVKAAQAGAAAIVVSNHGGRVLDQSPATAEVLPEIAA----------- 255 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIE 306 + + GG+R GVD+ K++ LGA +A PF+ + V ++ Sbjct: 256 ------AVGGKVKIFVDGGIRTGVDVFKALALGADAVLIARPFVNAVYGGGKEGVRCLVD 309 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L E +M + G ++E+ Sbjct: 310 KLGAELKDTMEMCGAATLREI 330 >gi|88705628|ref|ZP_01103338.1| L-lactate dehydrogenase [Congregibacter litoralis KT71] gi|88700141|gb|EAQ97250.1| L-lactate dehydrogenase [Congregibacter litoralis KT71] Length = 375 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 114/382 (29%), Gaps = 87/382 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 + + N F L R + LG+ S PL ++ M G + Sbjct: 24 ANNEETLSANCADFSKIRLRQRVM--YDVSRGSTDTTLLGQPASMPLALAPVGMAGMYAR 81 Query: 71 MIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E A A+E + M V S + + N F+L + L Sbjct: 82 RGEV---QAAKASETVGIPFTGSTMGVCSINEINAATNTAAWFQLYMLRDRDFVQEML-- 136 Query: 126 VQLNYDFGVQKAHQAVHVL---------------------GADGLFLHLNPLQEI-IQPN 163 Q +D G + V + + L L +P + Sbjct: 137 -QNAWDSGTRTLIFTVDLAVPGLRLRDFRNGMIGGGWMGKASQMLQLATSPGWAYDVGIR 195 Query: 164 GNTNFAD---------------------------LSSKIALLSSAMDVPLLLKEVGCGLS 196 G +F I L LL+K V L Sbjct: 196 GKPHFLGNLSGKVKDAKDLNSYKSFVESQFDPSVTWEDIRWLRDQWKGQLLIKGV---LE 252 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + D G ++ GG + S + Sbjct: 253 ADDARAARDCGAEGVVVSNHGGRQLDAVASSISKLPAV-----------------VDAVG 295 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 +E + GG+R+G+D+++++ LGA + P++ A++ V +E ++E ++ Sbjct: 296 SETEVFIDGGIRSGLDVVRAVALGARGVLMGRPWIYALAVNGEAGVRNLLEIFQREIAIA 355 Query: 316 MFLLGTKRVQELYLNTALIRHQ 337 + L G VQEL N LI + Sbjct: 356 LALTGVNSVQEL--NRELIDSE 375 >gi|16264891|ref|NP_437683.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] gi|15141030|emb|CAC49543.1| putative L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium meliloti 1021] Length = 378 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 113/364 (31%), Gaps = 73/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTEGTYRANEEDFAGIKLRQRVL--VDMSDRSLETTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS-------FELRQYAPHTVLISNLG 124 A AAE V + + + D ++ + + +R+ LI Sbjct: 87 ADGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTTKPFWFQLYVMREREFVLDLIDRAK 146 Query: 125 AV---QLNYDFGVQ-KAHQAVHVLGADGLFLHLNPLQEIIQP-----------NGNTNFA 169 A L +Q + + L P + F Sbjct: 147 AAKCSALVMTLDLQILGQRHKDLRNGLSAPPRLTPKHLWMMATRPGWCMKMLGTNRRTFR 206 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + PL+LK + L D ++ Sbjct: 207 NIVGHAKSVADLSSLQAWTNEQFDPQLSWKDVEWIKERWGGPLILKGI---LDPEDAKMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G ++ GG S + I ++ + Sbjct: 264 AKTGADAIIVSNHGGRQLDGAHSSISMLPRI-----------------VEAVGDQIEVHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G + Sbjct: 307 DGGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKR 366 Query: 323 RVQE 326 R+ E Sbjct: 367 RITE 370 >gi|27381512|ref|NP_773041.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27354680|dbj|BAC51666.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 394 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 115/366 (31%), Gaps = 74/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN F + R L + + SV G+ L P +++ TG N + Sbjct: 51 AESERSLHRNLGAFAAINFAPRRL--VDVSHRNSSVSLFGRTLPTPFVVAP-TGLNGALW 107 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIK----SFEL---------------RQ 112 + LA AA + + + D F+L ++ Sbjct: 108 PDGDVALARAARSAGIPFVLSTASNATIEDVAERAGGDLWFQLYVVQRDLARLLVGRAKE 167 Query: 113 YAPHTVLISNLGAVQLNYDFGVQK------------AHQAV-HVLGADGLFLHLNP---- 155 ++++ AV D ++ AV H A G H P Sbjct: 168 AGYRVLVLTVDVAVNGKRDRDLRNGFAIPFRQTPRSVLDAVTHPRWALGQIRHGLPQLAN 227 Query: 156 ----------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 Q + + + + L A L++K + +++ D+ + Sbjct: 228 FASPDATDVNAQAALM-RRQMDASFCWQDLQALRDAWPGRLIVKGI---MTATDVNRCRE 283 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ GG +++ DL ++I N + G Sbjct: 284 LGVDAVVLSNHGGRQIEDVQAPIDLLAEISN-------------------QNAMPLLVDG 324 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D +K++ LGA L L A + ++ L EF ++ L+G Sbjct: 325 GIRRGADAVKALALGAKAVLLGRAILYGLAAAGEEGAGHVLQILTAEFDTTLALVGCPDP 384 Query: 325 QELYLN 330 L Sbjct: 385 ARLNRQ 390 >gi|261364551|ref|ZP_05977434.1| L-lactate dehydrogenase [Neisseria mucosa ATCC 25996] gi|288567118|gb|EFC88678.1| L-lactate dehydrogenase [Neisseria mucosa ATCC 25996] Length = 390 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSSIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G D+LK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDVLKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RNIQD 374 >gi|295098729|emb|CBK87819.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 395 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLNLIEKEMKVAMTLTGAKTIGEISK 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|307319772|ref|ZP_07599196.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti AK83] gi|306894503|gb|EFN25265.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti AK83] Length = 378 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 113/364 (31%), Gaps = 73/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTEGTYRANEEDFAGIKLRQRVL--VDMSDRSLETTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS-------FELRQYAPHTVLISNLG 124 A AAE V + + + D ++ + + +R+ LI Sbjct: 87 ADGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTTKPFWFQLYVMRERQFVLDLIDRAK 146 Query: 125 AV---QLNYDFGVQ-KAHQAVHVLGADGLFLHLNPLQEIIQP-----------NGNTNFA 169 A L +Q + + L P + F Sbjct: 147 AAKCSALVLTLDLQILGQRHKDLRNGLSAPPRLTPKHLWMMATRPGWCMKMLGTNRRTFR 206 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + PL+LK + L D ++ Sbjct: 207 NIVGHAKSVADLSSLQAWTNEQFDPQLSWKDVEWIKERWGGPLILKGI---LDPEDAKMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G ++ GG S + I ++ + Sbjct: 264 AKTGADAIIVSNHGGRQLDGAHSSISMLPRI-----------------VEAVGDQIEVHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G + Sbjct: 307 DGGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKR 366 Query: 323 RVQE 326 R+ E Sbjct: 367 RITE 370 >gi|39957328|ref|XP_364317.1| hypothetical protein MGG_09162 [Magnaporthe oryzae 70-15] gi|149210999|ref|XP_001522874.1| hypothetical protein MGCH7_ch7g962 [Magnaporthe oryzae 70-15] gi|86196917|gb|EAQ71555.1| hypothetical protein MGCH7_ch7g962 [Magnaporthe oryzae 70-15] gi|145016999|gb|EDK01362.1| hypothetical protein MGG_09162 [Magnaporthe oryzae 70-15] Length = 383 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 111/331 (33%), Gaps = 39/331 (11%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEV--DPSVEFLGKKLSFPLLISSMT-GGNNKMI 72 + N + ++ + L + + + + LG S P I G Sbjct: 75 EWSYRNNLEVYNRYKLRPKTM--VDITNIAESMPTTILGHNFSAPFFICPCARAGYGHPD 132 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS------NLGAV 126 +N L A K+ S + + A + AP +L S N A Sbjct: 133 AELN--LVQGAGAGKILYIPSSFSTLPIEQIAA------KRAPDQILFSQVYTNDNDTAN 184 Query: 127 QLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 Q+ +D + +A V + A G + + + + + +P Sbjct: 185 QILFDRAEKAGSKALVWAIDAPGSPSRQRAARYGVGSANAVFITNTWEVLDKFRTMTKLP 244 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +LK + + D +L ++ + ++ GG + S ++ +I Sbjct: 245 FILKGIQ---TVEDAKLAVQHKVPAIILSNHGGRNLDGSPSSLEIALEIH---------- 291 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 A + + +A GG+R G D L+ + LG G+ P + + D V A+ Sbjct: 292 ----REAPEIFEQIEVLADGGVRYGTDALRLLALGVKAVGIGRPMMYSNVFGVDGVKRAV 347 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 E R E LG ++ ++T+ + Sbjct: 348 EIFRNELTNDAANLGVADIK--KIDTSFVDW 376 >gi|104780002|ref|YP_606500.1| L-lactate dehydrogenase [Pseudomonas entomophila L48] gi|166990708|sp|Q1IF69|LLDD_PSEE4 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|95108989|emb|CAK13685.1| L-lactate dehydrogenase, FMN linked [Pseudomonas entomophila L48] Length = 381 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 33/185 (17%) Query: 161 QPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + D P+++K + L + D +K G Sbjct: 213 NPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGI---LDADDARDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A + + +A G+R+ Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIKILADSGIRS 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA + FL A V + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADTVLIGRAFLYALATHGEAGVKNLLALFEKEMRVAMVLTGAKSISEIT 371 Query: 329 LNTAL 333 ++ + Sbjct: 372 RDSLV 376 >gi|262164512|ref|ZP_06032250.1| L-lactate dehydrogenase [Vibrio mimicus VM223] gi|262026892|gb|EEY45559.1| L-lactate dehydrogenase [Vibrio mimicus VM223] Length = 324 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 115/348 (33%), Gaps = 77/348 (22%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 E+ E G+K++ P+ +S + G R A AAE + + + V Sbjct: 1 MSELSLETELFGEKMALPIALSPV-GLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPI 59 Query: 101 DHNAIK-----SFEL-----RQYAPHTVLISN---LGAVQLNYDFGVQKAH---QAVHVL 144 + A F+L R + + + + + + D V A + Sbjct: 60 EEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMS 119 Query: 145 GADGLFLHLNPLQEIIQP---------------------NGNT----NFADLS------- 172 G + + LQ + P G+ ++ Sbjct: 120 GPNAAMRRV--LQAMTHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPS 177 Query: 173 ---SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + D P+++K + L + D + ++ G ++ GG + Sbjct: 178 ISWKDLEWIRDFWDGPMIIKGI---LDTEDAKDAVRFGADGIVVSNHGGRQLDGV----- 229 Query: 230 LESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + T +L +A + + + G+R G+D+++ + LGA L Sbjct: 230 -------------LSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGR 276 Query: 289 PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 F+ A V ++ KE V+M L G K + EL ++ + R Sbjct: 277 SFIYALAAQGRTGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSLVKR 324 >gi|254420663|ref|ZP_05034387.1| FMN-dependent dehydrogenase superfamily [Brevundimonas sp. BAL3] gi|196186840|gb|EDX81816.1| FMN-dependent dehydrogenase superfamily [Brevundimonas sp. BAL3] Length = 377 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 113/366 (30%), Gaps = 79/366 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + + L P++++ + TG + Sbjct: 29 AYAEQTLRRNVEDWQAIALRQRVLQ--DMTSLSLETRLFDETLRLPIILAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A AA V + + V + A F+L R + + + Sbjct: 87 RGEV---QAAKAAASRGVPFTLSTVSVCSIEEVAPAIDRPMWFQLYVLRDRGFMKNALER 143 Query: 121 SN---LGAVQLNYDFGVQKAHQ----------AVHVLGADGLFLH--------------- 152 + + + D A + +H Sbjct: 144 ARAAGVKTLVFTVDMPTPGARYRDAHSGMSGPHAEIRRMIQAMMHPAWAWDVGVRGTPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + +P G ++ + + D P+++K V L + D Sbjct: 204 LGNVSAYLGKPTGLADYIGWLGQNFDPSISWKDLQWIRDFWDGPMIIKGV---LDAQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 + G ++ GG + + + +L +A + + Sbjct: 261 DAVSFGADGIVVSNHGGRQLDGV------------------LSSARALPAIAEAVKGDIR 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 + G+RNG+D++++I LGA L F+ +A V ++ KE V+M L Sbjct: 303 ILIDSGVRNGLDVVRAIALGADAVMLGRAFVYALAAGGEAGVANLLDLFEKEMRVAMTLT 362 Query: 320 GTKRVQ 325 G K V Sbjct: 363 GAKSVA 368 >gi|126664348|ref|ZP_01735332.1| L-lactate dehydrogenase, FMN-linked [Marinobacter sp. ELB17] gi|126630674|gb|EBA01288.1| L-lactate dehydrogenase, FMN-linked [Marinobacter sp. ELB17] Length = 384 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 110/365 (30%), Gaps = 77/365 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN + D L R L ++D + E + LS P+ +S + G R Sbjct: 31 NEHTLKRNVEDLSDIALRQRVL--NDMTQLDLTTELFDETLSMPVALSPV-GLTGMFARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNLG 124 A AA V + + V + A F+L R + + + + Sbjct: 88 GEVQAARAAANLGVPFTMSTVSVCPIEEVAPAISRPMWFQLYVLKDRGFMRNALERAKAA 147 Query: 125 AVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN--------------- 163 V D V A + G + LQ + P+ Sbjct: 148 GVTTLVFTVDMPVPGARYRDAHSGMSGPYAAQRRI--LQAMTHPHWALNVGLLGKPHDLG 205 Query: 164 ----------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G ++ + + D P+++K + L D Sbjct: 206 NISAYRGSATGLGDYIGWLGDNFDPSICWKDLEWIREFWDGPMVIKGI---LDPDDARDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 G ++ GG + S I + + + Sbjct: 263 RSFGADGIIVSNHGGRQLDGVPSTCRALPAIAD-----------------AVKGDMKILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G+D+L+ + LGA + ++ A D V ++ + E V+M L G + Sbjct: 306 DSGIRTGLDVLRMLALGADCTMIGRAYIYALAADGEAGVTNLLKLIESEMRVAMVLTGAR 365 Query: 323 RVQEL 327 + ++ Sbjct: 366 TIADI 370 >gi|158422446|ref|YP_001523738.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] gi|259494966|sp|A8HTC9|LLDD_AZOC5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|158329335|dbj|BAF86820.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 380 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 119/375 (31%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L + L + ++ E G+KL+ P+ ++ + G + Sbjct: 29 AYAEYTLRRNVEDLSHIALRQQVL--RNVADLSLETELFGQKLTMPVALAPV-GLTGMLA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ V + + V + + F+L + A++ Sbjct: 86 RRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHVL--GADGLFLHL----------NPLQEIIQPN------------ 163 G+ V + GA H LQ ++ P Sbjct: 143 RAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPH 202 Query: 164 -------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDI 200 ++ + + S P+++K + L +D Sbjct: 203 DLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGI---LDPVDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 + G ++ GG + + + +L +A ++ Sbjct: 260 RDAVAFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVGDDL 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+R G+D+++ + LGA L F A V ++ + KE V+M L Sbjct: 302 TVLADSGIRTGLDVVRMLALGAKGVLLGRAFAYALATHGQAGVANLLDLIEKEMRVAMAL 361 Query: 319 LGTKRVQELYLNTAL 333 G + + E+ ++ + Sbjct: 362 TGARSIAEITRDSLV 376 >gi|315044949|ref|XP_003171850.1| hypothetical protein MGYG_06395 [Arthroderma gypseum CBS 118893] gi|311344193|gb|EFR03396.1| hypothetical protein MGYG_06395 [Arthroderma gypseum CBS 118893] Length = 494 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 115/355 (32%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL P++ S ++ +A Sbjct: 144 NNSIYKSILLRPRVF--VDCKNCSLATTMLGYKLDTPIIASPTA--MARLAHPSGEAGIA 199 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ + A++ Sbjct: 200 AACAKFGAMQIISNNASMTPEEIVKGASPDQVFGWQLYVQVDRKKSEAMLARINKIKAIK 259 Query: 128 ---LNYDFGVQKAHQAVHVLGA--------DGLFLHLNPLQEIIQPNGNTNFAD------ 170 L D V + A D + G FA Sbjct: 260 FICLTLDAPVPGKRELDERTKAVAATPAIADIVKSSGGQEIAGGGGLGQQLFAGTDPTLT 319 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L ++P++LK + + I I+ ++ GG + Sbjct: 320 WKDTLPWLLKHTELPIVLKGIQTHEDAY-IASLHSPQIKGIILSNHGGRAMDTAP----- 373 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ +L R YC E + GG++ G D++K++ LGA G+ Sbjct: 374 -------------PSVHTLMEIRKYCPEVFNRLEVWIDGGIKRGTDVVKALCLGAKGVGV 420 Query: 287 ASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 421 GRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 475 >gi|254786548|ref|YP_003073977.1| peroxisomal-2-hydroxy-acid oxidase [Teredinibacter turnerae T7901] gi|237684300|gb|ACR11564.1| peroxisomal-2-hydroxy-acid oxidase [Teredinibacter turnerae T7901] Length = 371 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 122/350 (34%), Gaps = 60/350 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFD--EVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + LP + E V + L P++++ + K++ Sbjct: 40 DERALQNNCNAFAKYQ----CLPSLLRPCGEGTTEVRLIDTVLRHPIVLAPVA--YQKLV 93 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV------MFSDHNAIKSFEL-----RQYAPHTVLIS 121 + A ++ V S + + + F+L R V + Sbjct: 94 HDLAEIETARAADATDSLMVSSTLASVPMEEVITHNKGTNWFQLYFQPDRDITQDLVARA 153 Query: 122 N---LGAVQLNYDFGVQKAHQAVHVLG----ADGLFLHL-NPLQ----EIIQPNGNTNFA 169 A+ + D VQ + + G AD +L N Q EI + + F Sbjct: 154 EASGFSALMVTLDAPVQTFSRRLMRKGCGLPADITAANLINYAQPEPVEIGRYE-SRVFQ 212 Query: 170 DLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + K + L + +P+++K V L+ D E L G+ ++ GG +++ Sbjct: 213 GVMRKAPTFADLEWLINYSKLPVIVKGV---LNPNDAERLLGCGVSGIVVSNHGGRAFAA 269 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D L R +A + G+R+G D+ K++ LGA Sbjct: 270 APAAID------------------CLAAVRERVGDACVLVDSGVRSGYDVFKALALGADA 311 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P + A+ + V ++ LR E V+M + G + E+ Sbjct: 312 VMIGRPQVHALAIAGALGVAHMLQLLRDELEVAMAMAGCATIDEIKRVPV 361 >gi|302186473|ref|ZP_07263146.1| L-lactate dehydrogenase [Pseudomonas syringae pv. syringae 642] Length = 380 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 113/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D + G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRANSSDLSDISLRQRVLK--NVDNLSLETRLFGESLAMPIILSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA +V + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQAAKAAANKRVPFCLSTVSVCSIEEVASQSKPAIWFQLYVLKDRGFMKNALERAK 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAASRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 L G ++ GG + T +L + + ++ Sbjct: 261 DALSFGADGIVVSNHGGRQLDGA------------------LSTARALPPIVQAVGSDLT 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G+D+++ + LGA L D V ++ +E V+M L Sbjct: 303 VLVDSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLT 362 Query: 320 GTKRVQEL 327 G ++++ Sbjct: 363 GVTSIEQI 370 >gi|312141622|ref|YP_004008958.1| fmn-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] gi|311890961|emb|CBH50280.1| putative FMN-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] Length = 406 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 82/246 (33%), Gaps = 43/246 (17%) Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 M V + + + ++A V +G L GV A ++ + Sbjct: 183 GMGVP---PVLTPRRLLDVSRHPRWAYDVVKHRRIGGRNLASGDGVTAALASIEIQERQL 239 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + LN +A + + LK V L D + G+ Sbjct: 240 VQSRLN-----------------WDDVAWMRDNWHGTVHLKGV---LRPEDAARAVDLGL 279 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGL 267 ++ GG +P+ +L +A A+ + GG+ Sbjct: 280 DGVVVSNHGGRQLDGC------------------VPSVAALPAVADAVAGRAEVLLDGGI 321 Query: 268 RNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+LK++ LGA + P L A+ V + LR+E + LLG + +Q+ Sbjct: 322 RRGTDVLKALALGADAVLVGRPCLYGMAVAGERGVEHVLTILREEIARGLTLLGVRDIQD 381 Query: 327 LYLNTA 332 L + Sbjct: 382 LDRSHV 387 >gi|241760023|ref|ZP_04758121.1| L-lactate dehydrogenase (cytochrome) [Neisseria flavescens SK114] gi|241319477|gb|EER55907.1| L-lactate dehydrogenase (cytochrome) [Neisseria flavescens SK114] Length = 390 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 115/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L + + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VDMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S D+ ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDV-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RNIQD 374 >gi|311277469|ref|YP_003939700.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterobacter cloacae SCF1] gi|308746664|gb|ADO46416.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterobacter cloacae SCF1] Length = 385 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGL---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATHGRQGVANLLNLIEKEMKVAMTLTGAKSIGEISQ 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|261380292|ref|ZP_05984865.1| L-lactate dehydrogenase [Neisseria subflava NJ9703] gi|284796804|gb|EFC52151.1| L-lactate dehydrogenase [Neisseria subflava NJ9703] Length = 390 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + ++ F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSSPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S D+ ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDV-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RNIQD 374 >gi|312897989|ref|ZP_07757398.1| dehydrogenase, FMN-dependent [Megasphaera micronuciformis F0359] gi|310620914|gb|EFQ04465.1| dehydrogenase, FMN-dependent [Megasphaera micronuciformis F0359] Length = 344 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 118/321 (36%), Gaps = 50/321 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL---ISSMTG-----GNNKMI 72 RN +++ LI +L I +E EF G+KLS P++ I ++T G + + Sbjct: 46 RNIAALNEYGLIMNSLRGI--EEPSTETEFFGQKLSMPVMVAPIGAITLNCKVEGEPEQV 103 Query: 73 ER--INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E+ A AA +A + S A +I + + Sbjct: 104 EKEYALAVAAGAATAGTLAFCGDGGAPYMYEGTLAAS-----AACPGRVIPTIKPRE--D 156 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP-----LQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 D ++K + GA ++ ++ + QP G N + I + +P Sbjct: 157 DKIIEKIAR-GEAAGAPATACDIDAATLVNMRLLGQPVGPKN----EASIRRICQESPLP 211 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++K + +S+ + + +G ++ GG + D+ +I Sbjct: 212 FVVKGI---MSAKEARICADAGAGAIVVSNHGGRILDDMAGTADVLPEIAA--------- 259 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAA 304 GG+R+G D+LK + LGA + P A+ + V Sbjct: 260 --------EIKGNIPVFVDGGIRSGEDVLKMLALGADAVLIGRPVAVAAIGGGAEGVALY 311 Query: 305 IESLRKEFIVSMFLLGTKRVQ 325 ++ +R+E I +M + GT V+ Sbjct: 312 LDKIRRELIDAMVITGTADVR 332 >gi|255066421|ref|ZP_05318276.1| L-lactate dehydrogenase [Neisseria sicca ATCC 29256] gi|255049301|gb|EET44765.1| L-lactate dehydrogenase [Neisseria sicca ATCC 29256] Length = 390 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 119/366 (32%), Gaps = 83/366 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 KSG ++ GG I + +L ++ ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDT------------------ISSIKALPDIVSAVGSDIEV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G D+LK+ LGA + FL + V A+E L KE +SM G Sbjct: 309 WMDSGIRSGQDVLKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTG 368 Query: 321 TKRVQE 326 + +Q+ Sbjct: 369 HRNIQD 374 >gi|241202839|ref|YP_002973935.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856729|gb|ACS54396.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 382 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 65/380 (17%), Positives = 116/380 (30%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + RN F+ L+ L +VD SV +G+KL+ P+ S Sbjct: 32 ADDEVTYRRNTAAFEACDLVPDVLRG--VADVDMSVTVMGQKLAMPVYCSPTALQRLFHH 89 Query: 64 ---------------MTG------GNNKMIERI-----------------NRNLAIAAEK 85 M G + + +I NR + A+ Sbjct: 90 QGERAVAAAAAKHGTMFGVSSLGTISLEEARQISNGPQVYQFYFHKDRGLNREMMARAKN 149 Query: 86 TKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V AM V S + + F + P + ++ + + + + Sbjct: 150 AGVQAMMLTVDSITGGNRERDKRTGFAI----PFKLNLAGMTQFAIKPSWAIDWLTH--E 203 Query: 143 VLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 L H+ + + + + +A + P LK + +S Sbjct: 204 RFRLPQLENHVKMDGGALSISRYFTEMLDPSMSW--DDVAEMVREWGGPFCLKGI---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + + G ++ GG S D ++I Sbjct: 259 VEDAKRAAEIGCSGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E++R E Sbjct: 302 DRVDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRTEIERG 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V +L R Sbjct: 362 MKLMGCTSVSQLSRRNLRFR 381 >gi|170719881|ref|YP_001747569.1| L-lactate dehydrogenase [Pseudomonas putida W619] gi|259494490|sp|B1J244|LLDD_PSEPW RecName: Full=L-lactate dehydrogenase [cytochrome] gi|169757884|gb|ACA71200.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudomonas putida W619] Length = 381 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 118/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + N L R L + E+ + LS P+ ++ + TG + Sbjct: 29 AYAEHTLRHNVSDLAGIALRQRVLK--NMSELSLETRLFDETLSMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVA--MAVGSQRVMFSDHNAIK---SFELRQYAPHTVLISNLGA 125 E A AA + M+ S + AI F+L + A Sbjct: 87 RGEV---QAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-----PLQEIIQPN---------- 163 ++ GV+ V + A N LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGANGPMRRVLQAMTHPEWAWDVGVMGR 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + D P+++K + L + Sbjct: 201 PHDLGNISKYRGNPTGLADYIGWLGSNFDPSISWKDLEWIREFWDGPMIIKGI---LDAD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D +K G ++ GG + + + +L +A Sbjct: 258 DARDAVKFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ I LGA + FL A+ V +E KE V+M Sbjct: 300 DLKILADSGIRSGLDVVRMIALGADTVLIGRAFLWALAVHGQAGVKNLLELFEKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L G K + E+ ++ + Sbjct: 360 VLTGAKAISEISRDSLV 376 >gi|307312328|ref|ZP_07591963.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] gi|306899497|gb|EFN30128.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] Length = 378 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 113/364 (31%), Gaps = 73/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTEGTYRANEEDFAGIKLRQRVL--VDMSDRSLETTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS-------FELRQYAPHTVLISNLG 124 A AAE V + + + D ++ + + +R+ LI Sbjct: 87 ADGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTTKPFWFQLYVMREREFVLDLIDRAK 146 Query: 125 AV---QLNYDFGVQ-KAHQAVHVLGADGLFLHLNPLQEIIQP-----------NGNTNFA 169 A L +Q + + L P + F Sbjct: 147 AAKCSALVLTLDLQILGQRHKDLRNGLSAPPRLTPKHLWMMATRPGWCMKMLGTNRRTFR 206 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + PL+LK + L D ++ Sbjct: 207 NIVGHAKSVADLSSLQAWTNEQFDPQLSWKDVEWIKERWGGPLILKGI---LDPEDAKMA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G ++ GG S + I ++ + Sbjct: 264 EKTGADAIIVSNHGGRQLDGAHSSISMLPRI-----------------VEAVGDQIEVHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+I LGA + PFL + V A++ +RKE +M L G + Sbjct: 307 DGGIRSGQDVLKAIALGAKGTYIGRPFLYGLGALGKEGVTLALDIIRKEMDTTMALCGKR 366 Query: 323 RVQE 326 R+ E Sbjct: 367 RITE 370 >gi|325673120|ref|ZP_08152814.1| (S)-mandelate dehydrogenase [Rhodococcus equi ATCC 33707] gi|325556373|gb|EGD26041.1| (S)-mandelate dehydrogenase [Rhodococcus equi ATCC 33707] Length = 406 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 82/246 (33%), Gaps = 43/246 (17%) Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 M V + + + ++A V +G L GV A ++ + Sbjct: 183 GMGVP---PVLTPRRLLDVSRHPRWAYDVVKHRRIGGRNLASGDGVTAALASIEIQERQL 239 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + LN +A + + LK V L D + G+ Sbjct: 240 VQSRLN-----------------WDDVAWMRDNWHGTVHLKGV---LRPEDAARAVDLGL 279 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGL 267 ++ GG +P+ +L +A A+ + GG+ Sbjct: 280 DGVVVSNHGGRQLDGC------------------VPSVAALPAVADAVAGRAEVLLDGGI 321 Query: 268 RNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+LK++ LGA + P L A+ V + LR+E + LLG + +Q+ Sbjct: 322 RRGTDVLKALALGADAVLVGRPCLYGMAVAGERGVEHVLTILREEIARGLTLLGVRDIQD 381 Query: 327 LYLNTA 332 L + Sbjct: 382 LDRSHV 387 >gi|257899611|ref|ZP_05679264.1| L-lactate oxidase [Enterococcus faecium Com15] gi|293571550|ref|ZP_06682572.1| hydroxyacid oxidase 1 [Enterococcus faecium E980] gi|257837523|gb|EEV62597.1| L-lactate oxidase [Enterococcus faecium Com15] gi|291608356|gb|EFF37656.1| hydroxyacid oxidase 1 [Enterococcus faecium E980] Length = 366 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 115/358 (32%), Gaps = 73/358 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N F+ ++ R L I D G +L P+ I + + Sbjct: 42 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPI-IQA-----PSAAQG 93 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 + A VA A GS + + N ++ A + ++ D G Sbjct: 94 LAHEKGEADTAKGVA-AAGSIFSISTYANT----TIKDAADAAPGAPQFFQLYMSKDDGF 148 Query: 135 QK--AHQAVHVLGADGLFLH-------------LNPLQ-EIIQPN----------GNTNF 168 + +AV GA + L +N Q + PN GN Sbjct: 149 NEFILKKAVEA-GAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEG 207 Query: 169 ADLS------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 ++ I + ++P+++K + S D + + +G ++ Sbjct: 208 KGIAEIYAAAKQGLTPDDIKTIKEITNLPVIVKGIQ---SPEDAVIAISAGADGIWVSNH 264 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + ++ I V I G+R G + K+ Sbjct: 265 GGRQLDGGPASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKA 307 Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + GA L + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 308 LASGADLVAIGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 365 >gi|307103721|gb|EFN51979.1| hypothetical protein CHLNCDRAFT_16948 [Chlorella variabilis] Length = 357 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 119/362 (32%), Gaps = 71/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--------- 65 + + N + L+ R L + VD S LG+ LS P+L + M Sbjct: 12 DEWTLRENAAALRRYRLLPRVL--VDVSAVDTSTVLLGQALSAPILFAPMAQQRLCHPDG 69 Query: 66 -----------GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL---- 110 G + ++ AE +V G +D N F++ Sbjct: 70 ELAMARAAAACGLPYILSTMATSSIQEVAEAVQVRGGGGGGGGAGADPNL--WFQIYVMK 127 Query: 111 RQYAPHTVLISN--LGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLN-----------PL 156 R+ ++ LG L + H+ L HL+ Sbjct: 128 RRDVTEWMVREVTALGYRALMVTVDAPRLGHREADDRNRYSLPPHLSMKNLEMLTRAAAT 187 Query: 157 QEIIQPNGN---TNFADLSSK------IALLSSAMDVPLLLKEVGCG-LSSMDIELGLKS 206 E ++ G+ +F+DL + IA L + + P + G L+ D ++ Sbjct: 188 TEGVEAEGSKFGRHFSDLFDQRLDWGAIAWL-NPLPRPTPTRGCLQGVLAPDDARRAVEL 246 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + + D+ + + G Sbjct: 247 GVDGIILSNHGGRQLNYAPAAIDMLPSVAE-----------------AVAGRVPLLVDGC 289 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + G D++K + LGAS + P L + V A+ LR E +SM LLGT V Sbjct: 290 VTRGTDVIKCLALGASAVLVGRPLLWALTLGGQRGVEEAVGMLRSELELSMALLGTSAVG 349 Query: 326 EL 327 ++ Sbjct: 350 QI 351 >gi|145333373|ref|NP_001078406.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] gi|332658632|gb|AEE84032.1| (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] Length = 314 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 99/321 (30%), Gaps = 75/321 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F R L I ++D S LG +S P++I+ + + Sbjct: 29 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDVSTTVLGFNISMPIMIAPTA---MQKM 83 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV-LISNLGAVQLNYD 131 + LA A S ++ + + + A + V + + Sbjct: 84 AHPDGELATARAT--------SAAGTIMTLSSWATCSVEEVASTGPGIRFFQLYVYKDRN 135 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNT--NFADL-------- 171 +Q +A G + L ++ P G T NF L Sbjct: 136 VVIQLVKRA-EEAGFKAIALTVDTPRLGRRESDIKNRFALPRGLTLKNFEGLDLGKIDKT 194 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I L S +P+L+K V +++ D + ++ G + Sbjct: 195 NDSGLASYVAGQVDQSLSWKDIKWLQSITSLPILVKGV---ITAEDARIAVEYGAAGIIV 251 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 + G + + T ++LE + GG+R G D Sbjct: 252 SNHGARQLDYVPA------------------TIVALEEVVKAVEGRIPVFLDGGVRRGTD 293 Query: 273 ILKSIILGASLGGLASPFLKP 293 + K++ LGAS ++S + Sbjct: 294 VFKALALGASGVFVSSFIIYT 314 >gi|157149221|ref|YP_001456540.1| L-lactate dehydrogenase [Citrobacter koseri ATCC BAA-895] gi|166990699|sp|A8ARJ1|LLDD_CITK8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|157086426|gb|ABV16104.1| hypothetical protein CKO_05061 [Citrobacter koseri ATCC BAA-895] Length = 396 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDLIEKEMKVAMTLTGAKSISEISR 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|156544048|ref|XP_001604745.1| PREDICTED: similar to (s)-2-hydroxy-acid oxidase [Nasonia vitripennis] Length = 367 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 120/341 (35%), Gaps = 74/341 (21%) Query: 34 RALPEI--SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA 91 R LP + + D S LG+K+S P+ +S TG N A AAE Sbjct: 47 RILPRMLRNVSNRDISTTVLGEKVSMPVGVSP-TGFQNFAHPDGECGNARAAEAAGTVFV 105 Query: 92 VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL 151 + D E+ + AP+ + ++ + + + +A G + + Sbjct: 106 LSCYSTTGID-------EVAKAAPNGNKWL-MTSIFKDREATLHMVRKA-EKCGFKAILV 156 Query: 152 HL-NP-----------------------LQEIIQPNGNTNFADLSSKI------------ 175 + NP +E + + S+ I Sbjct: 157 IVDNPIYGKCKNSALVDCLNKYKAKAAIFEEYLSTKKDVLVKGYSNNILDYLLDLLDDSL 216 Query: 176 -----ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 A L S +P++LK + L+ D LG++SG ++ GG + ++ Sbjct: 217 TWDDVAWLKSVTKLPIVLKGI---LTPEDAVLGVESGASAIFVSNHGGRQLDNTPATLEV 273 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + GI A+ ++A+ GG+ G D+ K++ LGA + + Sbjct: 274 LA---------GI--------AKAVGDKAEVYVDGGVTRGTDVFKALALGARMVFVGRSM 316 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L A D + +E LR+E + L G V+++ + Sbjct: 317 LWGLACDGERGARSVLEILREEVEQTFALTGCSSVKQVTRD 357 >gi|239995812|ref|ZP_04716336.1| (S)-2-hydroxy-acid oxidase [Alteromonas macleodii ATCC 27126] Length = 365 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 123/341 (36%), Gaps = 53/341 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN++ DD L+ RAL ++ LG++ P++ + + + Sbjct: 41 DELSMRRNREKLDDLCLLPRALKDVKLGG--TKTTLLGQQFEHPIISGPVA---YQALAH 95 Query: 75 INRNLAIA---AEKTKVAMAVGSQRVMFSD----------------HNAIKSFELRQYAP 115 + +A A + + + F D ++ EL Q A Sbjct: 96 PDGEIATAMATQAQGGLWVMSTLASRSFEDISNQVESPRWFQLYVQPTRSQTLELIQKAE 155 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTN 167 H + + + + + +A L + ++++ + P G Sbjct: 156 HFQFSALVITIDAPINGLRNREQRAEFSLPPNVRAVNIDTPPPLAPPGEGKSVVFQGLMA 215 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A IA + +P++LK + L+ +D + + G+ ++ GG + + S Sbjct: 216 QAPTWDDIAFIQQHTSLPIVLKGI---LNPLDAQKAAELGVAGIVVSNHGGRALDSVPSP 272 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ + + +E +A G+R G D++K + LGA+ + Sbjct: 273 VEMLP-----------------IIRQTVGDEMMVLADSGVRRGADVVKLMALGANAVLIG 315 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P + A + V I LR E ++M L G ++E+ Sbjct: 316 RPLMYGLATAGALGVAHTIRLLRDELEMTMALCGVGSIEEI 356 >gi|326915006|ref|XP_003203813.1| PREDICTED: hydroxyacid oxidase 1-like [Meleagris gallopavo] Length = 358 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 122/353 (34%), Gaps = 59/353 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L ++S +D S LG+K+S P+ +++ +M Sbjct: 31 ADDQETLADNVAAFSRWKLYPRVLRDVSV--MDLSTSVLGQKISMPVCVAATA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 A A + M + S E+ + AP + L V + Sbjct: 87 HPDGETATAKACQAMGTGMMLSSWATSSIE--------EVAEAAPGGLRWLQL-YVYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHL-------------------------NPLQEIIQPNGN 165 + +A G G+F+ + N + + Sbjct: 138 EVTKSLVKRA-ERAGYKGIFVTVDTPFLGRRIDDVRNKFQLPPHLRLKNFSSNNLAFSSG 196 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 +F + S +++A+D + K++ + + K +R D E Sbjct: 197 QDFGENSGLAVYVANAIDASISWKDIKWLRELTSLPIVAKGILRADD----------AKE 246 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + D +P E+ + + GG+R G DILK++ LGA Sbjct: 247 AVKLGXXXXXXXXIDI-LP-----EIVEAVEGKVEVFLDGGVRKGTDILKALALGAKAVF 300 Query: 286 LASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + ++ L++EF ++M L G + V+E+ T + RH+ Sbjct: 301 IGRPLIWGLVYQGEEGAKEVLQMLKEEFRLAMALTGCRTVKEIGR-TLIRRHE 352 >gi|298368427|ref|ZP_06979745.1| L-lactate dehydrogenase [Neisseria sp. oral taxon 014 str. F0314] gi|298282430|gb|EFI23917.1| L-lactate dehydrogenase [Neisseria sp. oral taxon 014 str. F0314] Length = 390 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSSIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RNIQD 374 >gi|302882916|ref|XP_003040363.1| hypothetical protein NECHADRAFT_34838 [Nectria haematococca mpVI 77-13-4] gi|256721241|gb|EEU34650.1| hypothetical protein NECHADRAFT_34838 [Nectria haematococca mpVI 77-13-4] Length = 457 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 117/334 (35%), Gaps = 65/334 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMT------G--GNNK 70 N F L R I S LG ++ P+ +S +M G G K Sbjct: 132 ANGAIFKSILLRPRIF--IDCTHCSLSTTLLGNRVGMPIFVSPAAMAKLAHPSGEVGIAK 189 Query: 71 MIERINRNLAIAAEKTKVAMA----------VGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 ++N L I ++ +++A G Q + D A + + I Sbjct: 190 ACSKVN-ALQIISKNASISVADIVRAGPNAVFGWQLYVLKDIKATE-----RTLAQIRAI 243 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + + L D +A A E + G + +A L++ Sbjct: 244 PQIKFIVLTLDAPFPGKREADERYKAT----------EPPRAWGTESALTWHKTLAWLTT 293 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLK-SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 D+P++LK + + D + K S ++ ++ GG + + + Sbjct: 294 QTDLPIVLKGIH---THEDAFIASKFSAVKGIILSNHGGRALDTANTPIQV--------- 341 Query: 240 DWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-A 294 L R +C + + GG++ G D++K++ LGA GL L A Sbjct: 342 ---------LLEIRKFCPQILSQVEIWVDGGIKRGSDVVKALALGARGVGLGRAALYSLA 392 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + D V +++ L E I +M LLG V EL Sbjct: 393 VGGEDGVSRSLQILADETITTMRLLGASCVSELR 426 >gi|310658451|ref|YP_003936172.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Clostridium sticklandii DSM 519] gi|308825229|emb|CBH21267.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium sticklandii] Length = 342 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 113/314 (35%), Gaps = 50/314 (15%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 L + + E E ++ + LS PL+ + +TG M ++ Sbjct: 54 QVKLNLKTIHEAKKPE--TNIMIFNQNLSLPLISAPVTGSEINMGGYLSEADY------- 104 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHT-VLISNLGAVQLNYDFGVQKAH-----QAV 141 + + S +F + + + I L A+ G+ + + Sbjct: 105 -------CKAVVSGSKMADTFAMIGDSGNPQFYIDGLNAITEENGCGIAIIKPRENNKII 157 Query: 142 HVLG----ADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + A+ L + ++ + G +++ + S+ ++P++LK + Sbjct: 158 ENIKKAEIANALAVGVDIDGAGLVTMALLGQPVGPKSKAELKEIISSTNLPVILKGI--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ + L ++ G + ++ GG + ++ +I A+ Sbjct: 215 MTVEEALLAVEIGAKAIVVSNHGGRILDDTLAPIEVLPEI-----------------AKA 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFI 313 + +A G +R+G DI K I GA + A P + A+ + V + I L+ E I Sbjct: 258 VKGKITIMADGSVRSGRDIFKYIAAGADIVLCARPIIWGAIGGGSEGVASYINHLKNELI 317 Query: 314 VSMFLLGTKRVQEL 327 +M L G + E+ Sbjct: 318 QAMILTGANNIGEI 331 >gi|154247852|ref|YP_001418810.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Xanthobacter autotrophicus Py2] gi|259491780|sp|A7IMB0|LLDD_XANP2 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|154161937|gb|ABS69153.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Xanthobacter autotrophicus Py2] Length = 388 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 121/375 (32%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + D L R L S EVD S L ++LS P+ ++ + TG + Sbjct: 29 AYAEATLRRNVEDLSDLALRQRVLK--SVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A AA + + + + V + + F+L R + + + Sbjct: 87 RGEV---QAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALER 143 Query: 121 S---NLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP------------ 162 + + + D V A + G + F + +Q ++ P Sbjct: 144 AWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRM--VQAVLHPFWAYDVGLMGTP 201 Query: 163 -------------NGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMD 199 ++ + + P+++K + L D Sbjct: 202 HDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGI---LDPED 258 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 ++ G ++ GG + S I E Sbjct: 259 ARDAVRFGADGIIVSNHGGRQLDGVLSSARAMPAIAD-----------------AVKGEM 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+R+G+D+++ + GA L F+ A V ++ + KE V+M L Sbjct: 302 TLLADSGIRSGLDVVRMLAQGADGVLLGRAFVYALAAAGRAGVENLLDIIAKEMRVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 G + + ++ ++ + Sbjct: 362 TGARAISDISRDSLV 376 >gi|330501172|ref|YP_004378041.1| (S)-mandelate dehydrogenase [Pseudomonas mendocina NK-01] gi|328915458|gb|AEB56289.1| (S)-mandelate dehydrogenase [Pseudomonas mendocina NK-01] Length = 401 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 118/374 (31%), Gaps = 76/374 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F+ L R L + G+ P ++ TG N + Sbjct: 40 ADDEFTLGRNRSIFESVTLQPRTL--RDVGQRSLERSLFGRTSQLPFMVGP-TGFNGLLT 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF---------------------SDHNAIKSFELR 111 + +LA AA + + + DH A ++ Sbjct: 97 RDGDLHLARAAADAGIPFVLSNASTTSIEDIAALDGVRAWMQIYLYRTRDHVAKLVERVK 156 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + ++++ A+ N ++ + + + + + H + +++ P+G F Sbjct: 157 RLNLEAIVVTTDSAIFGNREWDKRNYAKPLQLDLRNRLDVLRHPEWIWDVLVPDGVPRFR 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L IA L L++K + + D L Sbjct: 217 NLGDLLPPGKDSVKGAASALAAELDPTLSWDDIAWLRDIWPGKLIVKGM---IHPDDARL 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 L+ G+ ++ GG S + ++ AR + Sbjct: 274 ALQYGVDGVVLSNHGGRQLDGAVSALETLPEV-----------------ARINQGRMEIF 316 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGT 321 GG R G DI K+++LGAS + L AI LR E ++ LLG Sbjct: 317 LDGGFRRGSDIAKALLLGASGVLIGRAGLYGLAAGKGPGAAHAIGILRTELDRTLGLLGC 376 Query: 322 KRVQELYLNTALIR 335 ++EL LI Sbjct: 377 SSLEEL--TPDLIH 388 >gi|322386070|ref|ZP_08059709.1| lactate 2-monooxygenase [Streptococcus cristatus ATCC 51100] gi|321269914|gb|EFX52835.1| lactate 2-monooxygenase [Streptococcus cristatus ATCC 51100] Length = 378 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A V ++ S F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISQALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYTAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGIRRGQHVFKALASGADL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ-----ELYLNTA 332 + P + A+ S V E L E M L GT+ ++ +L N Sbjct: 310 VAIGRPAIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIENVKHFKLRHNPY 364 >gi|307294957|ref|ZP_07574799.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingobium chlorophenolicum L-1] gi|306879431|gb|EFN10649.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingobium chlorophenolicum L-1] Length = 384 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 114/367 (31%), Gaps = 76/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN F + L+ L + V G+ +PL++S TG Sbjct: 33 ADDEVSLSRNSAAFRELELLPDVL--VDVSSVRTETTIFGQPCRWPLMLSP-TGLTRMFH 89 Query: 73 ERINRNLAIAAEKTKVAMAV--------------GS-----QRVMFSDHNAIKSFELR-- 111 +A AA + + + GS Q +F D F R Sbjct: 90 GHAELAVARAAARHGLPYCLSTMGTTRLEELGQAGSGPKLFQIYIFKDRGLTAEFVARCK 149 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL---FLHLNP-LQEIIQ------ 161 H ++++ V N + L L LH + LQ + Sbjct: 150 DAGYHGLVLTVDTPVAGNRERDRASGLSLPPRLTLSSLLSFALHPSWSLQALTGSKFDLA 209 Query: 162 ------------PNGNTNFAD-------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 P ++ + L++ + PL +K V ++ D E Sbjct: 210 NVSHRVDALAAGPMSLFDYIGGQFDRAVTWRDLEWLAAEWNGPLAIKGV---MTPADAEQ 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-F 261 + G ++ GG + D + R + Sbjct: 267 SINCGATGVILSNHGGRQLDGAPAPADQ------------------ISAVRARIGDGPDV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 I GG+R G D++K++ LGA+ + P++ +A V + L +EF +M L G Sbjct: 309 ICDGGVRRGSDVVKALALGATACSIGRPYIYGLAAGGEAGVDRVLSLLFEEFERTMTLAG 368 Query: 321 TKRVQEL 327 + L Sbjct: 369 VPDIAAL 375 >gi|84687807|ref|ZP_01015677.1| glycolate oxidase [Maritimibacter alkaliphilus HTCC2654] gi|84664179|gb|EAQ10673.1| glycolate oxidase [Rhodobacterales bacterium HTCC2654] Length = 381 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 64/377 (16%), Positives = 115/377 (30%), Gaps = 87/377 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + RN FD L+ + L DE+D SVE +G+KL+ P +S Sbjct: 32 ADDEVTYRRNSDSFDQVDLLPKVLRGT--DEIDLSVEIMGQKLALPFYLSPTALQRLFHH 89 Query: 66 ----------------------GGNN------------------KMIERINRNLAIAAEK 85 G + +NR + A++ Sbjct: 90 RGERAVAAAAEKYGTMFGVSSLGTTSLEELRRKHKTPQVYQFYFHRDRGLNRAMMQRAKE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNY----DFGVQK 136 V + V S + + F + R V + A +NY F + + Sbjct: 150 AGVDVMMLTVDSITGGNRERDKRTGFSIPFRLTLGGMVQFAMKPAWGINYVTHEKFSLPQ 209 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + V + G E++ P N +A + LK + + Sbjct: 210 LDEHVDMGGGTLSI--GRYFTEMLDPTMN------WDDLAEMVEEWGGKFCLKGI---IH 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + G ++ GG + D +++ Sbjct: 259 PEDAVRAAEVGCDAVILSNHGGRQLDGSRAPFDGLAEV-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ I G++ G I+K++ +GA G+ +L P A V + LR E Sbjct: 302 DKLDVIMDSGVQRGTHIVKALSMGAKAVGIGRGYLFPLAAAGQAGVERMVGLLRDEVERD 361 Query: 316 MFLLGTKRVQELYLNTA 332 M L+G +V +L + Sbjct: 362 MRLMGAAKVADLSRDNL 378 >gi|323524963|ref|YP_004227116.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1001] gi|323381965|gb|ADX54056.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1001] Length = 396 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 118/373 (31%), Gaps = 77/373 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F+ L+ R L + + D L + PLLIS M G Sbjct: 33 AEDEITLARNRSAFEQTTLVPRVL--NNVENPDLHTTLLRLPSAAPLLISPM-GSCALAC 89 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV--------L 119 + +A AA K + MA S + + F+L Sbjct: 90 RGADVAIARAAAKRGIPYVLSSMATTSMEEVRRSVDGRLWFQLYTLKDRAFTRSLVERAK 149 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-----------IQPNGNTNF 168 +N A+ + D + + + + + L Q + G F Sbjct: 150 AANFEALVVTVDLPIGGKRER-DLKNGVRIPMRLGIPQAYQLLTHPRWALQVAARGTPQF 208 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A L D P+++K V D Sbjct: 209 ENIRGLGGSDDAGLTIAAKVGQMLDSRFDWEDLARLRDLWDGPIVVKGVQH---PRDAIR 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQF 261 + G+ ++ GG E + SL +A + + Sbjct: 266 LSQVGVDAIWVSNHGGRQLDGAE------------------SSFESLRAIAAAVGSGIEL 307 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+R GVD++KS+ +GA + P L A D + AI+ L E +M L G Sbjct: 308 IIDSGIRRGVDLVKSVAVGARAVAIGRPALFGAAAGGHDGALRAIDILLDEARRAMMLCG 367 Query: 321 TKRVQELYLNTAL 333 K + + ++ + Sbjct: 368 VKTIDSISMSGLI 380 >gi|319405156|emb|CBI78762.1| L-lactate dehydrogenase [Bartonella sp. AR 15-3] Length = 383 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 114/371 (30%), Gaps = 73/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L +I +VD S E L +KL P++++ + TG + Sbjct: 29 AYAEETMRRNYTDLQKLALRQRILKQIG--DVDLSTEVLDQKLGMPIVLAPVGLTGMYAR 86 Query: 71 MIE----------------------RINRNLAIAAEKTKVAMAV----GSQRVMFSDHNA 104 E I+ A ++ + V G R A Sbjct: 87 RGEVKAARAAVAKNIPFTLSSVSVCPISEIQAAVGKEFWFQLYVLKDRGFMRDALERAWA 146 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL----------------GADG 148 L V + + + + Sbjct: 147 AGVRTLVFTVDMPVPGARYRDAHSGMSGPYAGVRRIIQAVFHPHWAWDVGIMGHPHDLGN 206 Query: 149 LFLHLN---PLQEII-QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + +L L++ I N + + S + + ++LK + L D + Sbjct: 207 ISAYLKKKTTLKDYIGWLGANFDPSIGWSDLQWIRDFWKGKMILKGI---LDPEDALEAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L ++A + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTAQALPKIADIIKGDLTILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G+D+++ I GA + F+ A VV +E +E V+M L G Sbjct: 306 DSGIRSGLDVIRMIAQGADAVMIGRAFVYALAAAGEQGVVHLLELFAQEMRVAMTLTGVS 365 Query: 323 RVQELYLNTAL 333 ++E+ + Sbjct: 366 TIKEITRGNLV 376 >gi|159898395|ref|YP_001544642.1| (S)-2-hydroxy-acid oxidase [Herpetosiphon aurantiacus ATCC 23779] gi|159891434|gb|ABX04514.1| (S)-2-hydroxy-acid oxidase [Herpetosiphon aurantiacus ATCC 23779] Length = 358 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 119/369 (32%), Gaps = 100/369 (27%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ + L R L + + LG+ ++ P+ I+ M G ++ Sbjct: 31 DEITLQANQAAYTKLKLRPRVL--VDVSQCTLETSVLGQTIAMPIGIAPM--GCQGLVHA 86 Query: 75 ----------------------INRNLAIAAEKTKVAM---------------------A 91 N +L A+ + A Sbjct: 87 EGECAMARAAEAAQTVMIASAMANYSLEAIAQAANGPLWFQLYVYRERQITEALVRRVEA 146 Query: 92 VGSQRVMF---------SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 G Q ++ + + F L P + +N A Q Sbjct: 147 AGYQALVLTVDVPFLGRRERDLRNGFAL----PQHLHFANF--------APTDAAGQHQQ 194 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 LGA G+ H G + A I L S +P++LK + LS+ D +L Sbjct: 195 TLGASGIATH---------AAGRFDAALTWEAIDWLRSLTRLPIVLKGI---LSAEDAQL 242 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G+ ++ GG + + T L + + + Sbjct: 243 AVQHGVDGLIVSNHGGRQLDTVAA------------------TIECLPAIVDAVGSTCEV 284 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R G D+LK++ LGA + + P L A+D +E LR E+ +++ L+G Sbjct: 285 YLDGGIRRGTDVLKALALGAKMVFVGRPLLWGLAVDGQQGAHHVLELLRSEYSLALGLIG 344 Query: 321 TKRVQELYL 329 +L Sbjct: 345 CPHSHQLNR 353 >gi|310791386|gb|EFQ26913.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 382 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 112/328 (34%), Gaps = 47/328 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---GNN 69 + N + F + L R + +I+ E LG S P+ IS G+ Sbjct: 71 AAGEWSYRNNLEVFGRYRLRPRTMVDITNIESTLPTTILGHNFSAPIFISPAARADYGHP 130 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 +N A AAE A+ + + + ++ L +N A ++ Sbjct: 131 DA--ELNLMRAAAAENILYMPALYAGKTIEQIAEVKADGQV--AFQQVYLTTNETATKIL 186 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD------------LSSKIAL 177 +D + A + ++ + N + + Sbjct: 187 FD--------RIKASDAKAIVYTVDSAAD---GNRHRAARFGVTSADSDYSLITWDEYKK 235 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 LS+ D+P+++K + ++ D E +++ + ++ GG S ++ +I Sbjct: 236 LSAMTDLPIIIKGI---MTVEDAEAAIENNVPAIVLSNHGGRQLDGSPSSLEVALEIYEK 292 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 + + + A GG+R G D+LK + LG G+ P + + Sbjct: 293 DPE--------------IFKKIEVYADGGVRYGADVLKLLSLGVKAVGIGRPIMFSNVFG 338 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 V AI+ L+ E + LG ++ Sbjct: 339 QPGVEKAIQLLKHEIAIDAGNLGVPDLK 366 >gi|303282791|ref|XP_003060687.1| glycolate oxidase [Micromonas pusilla CCMP1545] gi|226458158|gb|EEH55456.1| glycolate oxidase [Micromonas pusilla CCMP1545] Length = 422 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 114/376 (30%), Gaps = 83/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RNK + L R L + +D S F+ + + P +S T G+ Sbjct: 39 ADDEITLRRNKDAYSSLELHPRVLAGLKPP-LDLSARFMRSECALPFFVSP-TAGSKMFH 96 Query: 73 ERINRNLAIAAEKTK--------------------------------------------- 87 + +A AA K Sbjct: 97 ADGEQGVARAAAKHGVMYSLSTMGTSAPAEVAAAIPPKHPKLFQLYVWKDRALVRDMLRQ 156 Query: 88 --------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF--GVQKA 137 +A+ V + + F + + + A ++DF + A Sbjct: 157 AMDNGFDALALTVDLTWYGNRERDVRNGFTVPPAYTLRQIADAVRAPAWSWDFLANEEYA 216 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD--VPLLLKEVGCGL 195 + AV + + + +++ P + L + P+ LK V L Sbjct: 217 YAAVKLAAEGAFYTLVAFIRDAFDP------SFDWDDAEWLVNEWGDRGPVALKGV---L 267 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + D L ++ G ++ GG + D+ +I G+ Sbjct: 268 TPEDARLAVERGFDAVWVSNHGGRQLETSPAAIDVLPNIRDALGGTGL------------ 315 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIV 314 + + GG++ G D+LK + LGA L P+L +A V A LR E Sbjct: 316 --AVELVVDGGVQRGTDVLKGLALGADAVALGKPYLYGLGAGGEAGVDRAFTILRDELER 373 Query: 315 SMFLLGTKRVQELYLN 330 + LLG EL Sbjct: 374 AFGLLGVGTTAELRRR 389 >gi|329851237|ref|ZP_08265994.1| L-lactate dehydrogenase cytochrome [Asticcacaulis biprosthecum C19] gi|328840083|gb|EGF89655.1| L-lactate dehydrogenase cytochrome [Asticcacaulis biprosthecum C19] Length = 383 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 120/367 (32%), Gaps = 75/367 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N L R L + ++ E G+KL+ P+ ++ + G R Sbjct: 31 AEATLRANVDDLSRLALRQRILK--NVADLSLETELFGEKLAMPVALAPV-GLGGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN-L 123 +A AA+K + + + + KS F+L R + H + + L Sbjct: 88 GEVQVAKAAKKANIPYIISTVSLCPLKEIVEKSGHNVWFQLYVLKDRGFMKHALERAQSL 147 Query: 124 GAVQL--NYDFGVQKAHQAVHVLGADGLFLHL-NPLQEIIQPN----------------- 163 G +L D V A G G F + +Q + +P Sbjct: 148 GVTKLVFTVDMPVPGARYRDKHSGMSGDFGPIRRMVQAMFKPQWAWDVGVNGTPHDLGNV 207 Query: 164 --------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 G ++ + + P+++K + L D ++ Sbjct: 208 SDYLGKATGLEDYIGWLGANFDPSISWQDLEWIRDIWKGPMIIKGI---LDPEDARDAVR 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIAS 264 G ++ GG + T +L +A ++ +A Sbjct: 265 FGADGIVVSNHGGRQLDGA------------------LSTTRALPAIADAVGDDLTILAD 306 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLLGTKR 323 G+R G+D+++ + LGA L ++ +A V+ + L E +M L G R Sbjct: 307 SGVRTGLDVVRMLALGAKGVLLGRAYIYALATGGEAAVSNLLGLIDKEMRTAMALTGVTR 366 Query: 324 VQELYLN 330 + ++ + Sbjct: 367 IDQINES 373 >gi|302661314|ref|XP_003022326.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] gi|291186266|gb|EFE41708.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] Length = 512 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 125/374 (33%), Gaps = 86/374 (22%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FD R + + EV+ LG +S PL ++ + M++ I + Sbjct: 145 DANKSSFDRIWFRPRVM--RNVREVNTKSSILGCSVSMPLFVAP-----SAMVKLIHPDG 197 Query: 78 NL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLI----S 121 L A A + + + S FS + + R A + + Sbjct: 198 ELGIARACQSRGIMQGI-SNNASFSLKEISDAAPDTQFIFQLYVNRDRAKSAAQLHECSA 256 Query: 122 N--LGAVQLNYDFGVQKAHQAVHVLGADG-LFLHLNPLQEIIQPNGNTNFADL------- 171 N + A+ + D +A + AD L L + P + N + L Sbjct: 257 NPQVKAICITVDAAWPGKREADERVKADENLTLPMVPAK----GNNDKKGGGLGRVMAGF 312 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +PLLLK V S+ D + +++GI ++ GG + Sbjct: 313 IDPGLTWEDVKWARQHTHLPLLLKGVQ---SADDAVMAMEAGIDGIMLSNHGGRNLDTSP 369 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + ++ + + +R G DILK+I LGA+ G Sbjct: 370 ASIIVLLELH--------------RRCPEVFDRMEIYIDSEIRRGTDILKAICLGATAVG 415 Query: 286 LASPFLKPAMDSSDAVVAAIES--------------------LRKEFIVSMFLLGTKRVQ 325 + FL + + I+S +R E +M +G + Sbjct: 416 MGRSFLFASNYGQEGAEHLIDSMYYLFSYIFFFFHPPFWPVVMRDELEGAMRNIGITSLD 475 Query: 326 EL---YLNTALIRH 336 + Y+NTA I H Sbjct: 476 QAGPQYINTADIDH 489 >gi|170766903|ref|ZP_02901356.1| L-lactate dehydrogenase [Escherichia albertii TW07627] gi|170124341|gb|EDS93272.1| L-lactate dehydrogenase [Escherichia albertii TW07627] Length = 396 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L FL A V + + KE V+M L G K ++E+ Sbjct: 313 LDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLSLIEKEMKVAMTLTGAKSIKEITG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|15891091|ref|NP_356763.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15159430|gb|AAK89548.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 381 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 64/377 (16%), Positives = 120/377 (31%), Gaps = 87/377 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL------------ 60 + RN F++ L+ L +VD SV +G+KL+ P+ Sbjct: 32 ADDEVTYRRNTAAFENCDLVPDVLQG--VADVDMSVTVMGQKLAMPVYCSPTALQRLFHH 89 Query: 61 -----ISSMTG-------------GNNKMIERI-----------------NRNLAIAAEK 85 +++ G + + RI NR++ A+ Sbjct: 90 QGEKAVAAAAGKFGTMFGVSSLGTTSLEEARRISGGPQVYQFYFHKDRGLNRDMMARAKS 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQ-----LNYDFGVQK 136 V + V S + + F + + + + + F + + Sbjct: 150 AGVETMMLTVDSITGGNRERDKRTGFAIPFKLNLSGIAQFAMKPAWGINYLTHERFSLPQ 209 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + L + E++ P+ N +AL+ P LK + +S Sbjct: 210 LDDHIKM-DGGALSIS-RYFTEMLDPSMN------WDDVALMVREWGGPFCLKGI---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D ++ G ++ GG S D ++I Sbjct: 259 VDDARRAVEIGCSGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E++R E Sbjct: 302 DRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRIEIERG 361 Query: 316 MFLLGTKRVQELYLNTA 332 M L+G V +L Sbjct: 362 MKLMGCTTVDQLTRRNL 378 >gi|222102477|ref|YP_002539516.1| dehydrogenase [Agrobacterium vitis S4] gi|221739078|gb|ACM39811.1| dehydrogenase [Agrobacterium vitis S4] Length = 392 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 107/358 (29%), Gaps = 75/358 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + F D L R L +S G++ S P I+ M G + M R + LA Sbjct: 51 NAEAFRDISLTPRVLRNVSTR--TTKTILFGEEWSAPFGIAPM-GISALMAYRGDLVLAK 107 Query: 82 AAEKTKVAM-AVGSQRVMFSD--HNAIKSFELRQYAPHTVLISNL-----GAVQLNYDFG 133 AA+ +AM GS + + A +S+ I L A Sbjct: 108 AAQDAGIAMIMSGSSLIRLEEIIEAAPRSWFQAYLPGEPDRIDGLIDRVASAGYKTLVLT 167 Query: 134 VQKAHQAVHVLG------------------------------ADGLFLHLNPLQE----- 158 V A A A + H P E Sbjct: 168 VDTAVLANRENNIRAGFSTPLRPSLRLTWQGMTHPAWTIGTFARTILTHGIPHFENSYAT 227 Query: 159 ----IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 II N +F + + L++K + L D + + G Sbjct: 228 RGAPIIASNVMRDFGKKDHLSWGHFSRIRQRWTGNLVVKGI---LHPEDAAMAAERGADG 284 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + I ++ + GG+R G Sbjct: 285 IIVSNHGGRQLDGAIAPMKALPAI-----------------VDRVGSDTVVMIDGGIRRG 327 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D++K++ LGA + PF+ A+ S V A L E M LLG + EL Sbjct: 328 TDMVKALALGAKFVFVGRPFVYAVAVGSKAGVAKATSILSDELHRDMGLLGVTEIIEL 385 >gi|103487330|ref|YP_616891.1| (S)-2-hydroxy-acid oxidase [Sphingopyxis alaskensis RB2256] gi|98977407|gb|ABF53558.1| (S)-2-hydroxy-acid oxidase [Sphingopyxis alaskensis RB2256] Length = 382 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 69/377 (18%), Positives = 118/377 (31%), Gaps = 85/377 (22%) Query: 8 DHINIVCKDPGIDR-NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--- 63 D+I+ D R N+ FD LI R L + VD G++++ PL +S Sbjct: 26 DYIDGAADDEVTRRRNRDAFDQCDLIPRVLAG--VESVDMRTTLFGREMAMPLFLSPTAL 83 Query: 64 ---------------------MTGGNNKMI-----------------------ERINRNL 79 M G ++ E +NR + Sbjct: 84 QRLFHWQGERAVLRAAANAGTMAGISSLATIGLAEAGALTDGPKLFQLYVHKDEGLNRAM 143 Query: 80 AIAAEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 AA K VA+ V + + F +P N+ + +G+ Sbjct: 144 LDAARDAKFDAVALTVDTIVGGNRERCLRSGFT----SPPRFTPGNMLSYAARPGWGLDY 199 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-----SSKIALLSSAMDVPLLLKEV 191 + L H++ + + + + L ++ + D P LK + Sbjct: 200 LLR--EKFSLPNLATHVSEGSSVPKSVADYFTSMLDQSLDWKRVEAIRRQWDGPFCLKGI 257 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 ++ D + G ++ GG R L+ I GI Sbjct: 258 ---VAVEDAKRAADIGATAIMVSNHGG---------RQLDGSIAPFDALAGI-------- 297 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 + + I GG+ G +LK++ GA +L A D V AI LR Sbjct: 298 VDAVGDRVEVICDGGITRGTHVLKALSAGAKACSGGRLYLYALAAAGEDGVARAIALLRA 357 Query: 311 EFIVSMFLLGTKRVQEL 327 E M L+G + + +L Sbjct: 358 EIERGMKLMGARTLADL 374 >gi|146341043|ref|YP_001206091.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein glycolate oxidase [Bradyrhizobium sp. ORS278] gi|146193849|emb|CAL77866.1| Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein; putative Glycolate oxidase [Bradyrhizobium sp. ORS278] Length = 378 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 117/324 (36%), Gaps = 39/324 (12%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN+ D+ R L VD SVE G++L P++++ + G ++ + Sbjct: 52 ETTLRRNRMALDEIAFRPRVL--RDVSRVDASVELFGRRLRLPVVMAPV--GALEIFDPA 107 Query: 76 NRN-LAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFELRQYAPHTVLISNLG-AVQ 127 +A A + A + S +A++ F+L + +G AV Sbjct: 108 GAASVARGAGRFGAAHMLSSVSEPGLEKTAEAAPDALRIFQLYVRGDDAFVEDYVGRAVA 167 Query: 128 LNYD---FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 NY V AH + ++ + G+ A + L+ + Sbjct: 168 NNYTAFCLTVDTAHYSRRERDIAKRYVRE---SRLRATGGDHQKALSWHTVKLIKDKFRL 224 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 PL++K + ++ D + L G+ + ++ GG + +I Sbjct: 225 PLIIKGIA---TAEDAAIALDHGVDWIYVSNHGGRQLDHGRGAMHVLPEI---------- 271 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVA 303 A+ + GG G DI+K+I GA + G+ A + ++ Sbjct: 272 -------VAAVKGRAKILVDGGFCRGTDIVKAIASGADMVGIGRLQCWALAAAGENGILR 324 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 +E L E I ++ LLG EL Sbjct: 325 MLELLEDEVIRALGLLGVTSFAEL 348 >gi|227552590|ref|ZP_03982639.1| L-Lactate oxidase FMN-binding domain protein [Enterococcus faecium TX1330] gi|227178216|gb|EEI59188.1| L-Lactate oxidase FMN-binding domain protein [Enterococcus faecium TX1330] Length = 372 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 112/349 (32%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 48 DEWTMKENTTSFNAKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 105 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 106 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDGF---NEFILNKA 162 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 163 VEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 222 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + ++P+++K + S D + + +G ++ GG Sbjct: 223 AKQGLTPDDIKTIKEITNLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 279 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 280 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 322 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 323 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKSIDEVKNTKLM 371 >gi|94986156|ref|YP_605520.1| (S)-2-hydroxy-acid oxidase [Deinococcus geothermalis DSM 11300] gi|94556437|gb|ABF46351.1| (S)-2-hydroxy-acid oxidase [Deinococcus geothermalis DSM 11300] Length = 370 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 113/346 (32%), Gaps = 58/346 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F L R L + VDP E LG LSFP+ I+ + Sbjct: 43 AGDEVTLRANREGFCRLRLRPRVL--VDVSNVDPRTEVLGLPLSFPVGIAPSA---FHGL 97 Query: 73 ERINRNL--AIAAEKTK--VAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTV-- 118 + L A AA + ++ S + + A + R + V Sbjct: 98 AHPDAELGTARAAASAGSVLTLSTFSNTPIEAVAAAAAGRFWFQLYLYTDRNISAEIVRR 157 Query: 119 --------LISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTN 167 L+ + A L ++ A+ + G L L+ Sbjct: 158 AEAAGARALVLTVDAPFLGRREPNERHRFALPPHLSVPNAGSREQLRALESESGSQLVNY 217 Query: 168 FADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 F L K +A L +P++LK + L++ D L G ++ GG Sbjct: 218 FQGLVDKTVTWADLAWLRGLTTLPIVLKGI---LTAEDAALAAHHGCH-VWVSNHGGRQL 273 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 S + +I + + GG+ G D+LK++ LGA Sbjct: 274 DTAVSSIEALPEI-----------------VDAVQGQVEVYLDGGVTRGTDVLKALALGA 316 Query: 282 SLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 L L +A V +E L E +++ L G + V + Sbjct: 317 RCVFLGRAALWGLAAGGEAGVRRTLELLHDEVRLALALCGKQNVGQ 362 >gi|296100531|ref|YP_003610677.1| L-lactate dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054990|gb|ADF59728.1| L-lactate dehydrogenase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 395 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPDDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLNLIEKEMKVAMTLTGAKTIGEISK 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|317407518|gb|EFV87472.1| L-lactate dehydrogenase [Achromobacter xylosoxidans C54] Length = 381 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 64/381 (16%), Positives = 115/381 (30%), Gaps = 89/381 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + RN + F+ L+ L +VD SV +G+KL+ P+ S Sbjct: 32 ADDETTYRRNTEAFEACDLVPDVLRG--VADVDMSVTVMGQKLAMPVYCSPTALQRLFHH 89 Query: 64 --------------------------------MTGGNN------KMIERINRNLAIAAEK 85 ++GG +NR++ A+ Sbjct: 90 DGERAVAAAAGKFGTMFGVSSLGTVSLEEARQISGGPQVYQFYFHKDRGLNRDMMARAKA 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV- 141 V + V S + + F + NL + + A Sbjct: 150 AGVQVMMLTVDSITGGNRERDKRTGFAI-------PFRLNLAGIAQFAIKPAWAINYATH 202 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGL 195 L H++ + + F ++ +A + LK + + Sbjct: 203 ERFRLPQLDGHVDMGGGAMS--ISRYFTEMLDPAMTWDDVAAMVREWGGQFCLKGI---M 257 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D + + G ++ GG S D ++I Sbjct: 258 SVEDAKRAVDIGCTGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAV 300 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIV 314 + + GG++ G +LK++ LGA GL +L P A V A+E +R E Sbjct: 301 GDRIDVMMDGGVQRGTHVLKALALGAKAVGLGRYYLFPLAAAGRPGVERALEQMRVEIER 360 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M L+G + V +L R Sbjct: 361 AMKLMGCRTVGQLQRRHLRFR 381 >gi|320586824|gb|EFW99487.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 498 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 104/354 (29%), Gaps = 65/354 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLS--FPLLIS--SMT-GGNNKMIERIN 76 N F L R + + LG +L+ P+ +S +M G+ I Sbjct: 143 NHTVFQQILLRPRVF--VDMTACSTTTTLLGGQLAVGLPVFVSPAAMARLGHPDGEAGIA 200 Query: 77 R------NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL---RQYAPHTVLISNLGAVQ 127 R L I + A Q V + + +++ + +++ + + Sbjct: 201 RGVSRFGALQIVSHN---ASMTVEQIVADALPGQLFGWQIYVQKDRRKSEAMLARINGLS 257 Query: 128 -------LNYDFGVQKAHQAVHV----LGADGLFLHLNPLQEIIQPNGNT-NFAD----- 170 L D V + GA + + F Sbjct: 258 QYYRCVVLTLDASVPGKREDDERQQFGTGASFAAATQDVGSQPAGAGIGRQMFFGTATDI 317 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI---RYFDIAGRGGTSWSRIES 226 + + L++ +P++LK + + + + ++ GG S Sbjct: 318 TWQTTLPWLAAHTSLPIVLKGIQTHEDAWLAARYAAAHPGSVQAIILSNHGGRSLDTAP- 376 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGAS 282 P +L R YC + GG+ G D++K++ LGA Sbjct: 377 -----------------PAIHTLLEIRKYCPAVFDHVEVWIDGGVHRGTDVVKALCLGAK 419 Query: 283 LGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 G+ L V E L E M LLG + +L N L+ Sbjct: 420 AVGVGRAALWGLGAGGWRGVDRTFEILSDEIKTCMRLLGATSIADL--NPRLVN 471 >gi|134102334|ref|YP_001107995.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291003703|ref|ZP_06561676.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133914957|emb|CAM05070.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 404 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 124/372 (33%), Gaps = 74/372 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D L VD + LGK + P ++ TG M Sbjct: 59 AEGETSLRRARQAFRDVEFRPSVL--RDVSGVDTTTSVLGKPSAMPFSLAP-TGFTRMMN 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFEL-----RQYAPHTVLIS 121 + A++ + + + D A K F+L R + V + Sbjct: 116 HEGETAVVRVAQRAGIPYGLSTMGTTSIEDTATAGPAARKWFQLYVWRDRAASRDLVQRA 175 Query: 122 NLG---AVQLNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEIIQ------------PNG 164 A+ L D V A + + + L L + + P Sbjct: 176 REAGYEALILTVDTPVAGA-RLRDMRNGLTIPPALTLKTIADGAMHPAWWFNLLTTEPLS 234 Query: 165 NTNFADL-----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 +F+ + + L A D PL++K + + D ++ G Sbjct: 235 FASFSRWEGTAAELINEMFDPSLNFTDVEWLREAWDGPLIVKGLQ---NVPDARRVVELG 291 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE--MARPYCNEAQFIASG 265 ++ GG R PT L L + + A+ + Sbjct: 292 ADAVILSNHGGRQLDRA-------------------PTMLELLPQVREAIGDRAEIMLDT 332 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRV 324 G+ +G DI+ ++ LGA + +L M + V A++ LR E + +M LLG +V Sbjct: 333 GILSGADIVAALALGADSCLVGRAYLYGLMAGGEQGVQRAVDILRTEVVRTMQLLGVSKV 392 Query: 325 QELYLNTALIRH 336 +L + A++R Sbjct: 393 DDLDGSYAVLRR 404 >gi|257896928|ref|ZP_05676581.1| L-lactate oxidase [Enterococcus faecium Com12] gi|293379129|ref|ZP_06625280.1| putative L-lactate oxidase [Enterococcus faecium PC4.1] gi|257833493|gb|EEV59914.1| L-lactate oxidase [Enterococcus faecium Com12] gi|292642270|gb|EFF60429.1| putative L-lactate oxidase [Enterococcus faecium PC4.1] Length = 366 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 112/349 (32%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 42 DEWTMKENTTSFNAKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 100 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDGF---NEFILNKA 156 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 157 VEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 216 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + ++P+++K + S D + + +G ++ GG Sbjct: 217 AKQGLTPDDIKTIKEITNLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 273 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 274 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 316 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 317 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKSIDEVKNTKLM 365 >gi|161870249|ref|YP_001599419.1| L-lactate dehydrogenase [Neisseria meningitidis 053442] gi|218768394|ref|YP_002342906.1| L-lactate dehydrogenase [Neisseria meningitidis Z2491] gi|304387296|ref|ZP_07369489.1| L-lactate dehydrogenase [Neisseria meningitidis ATCC 13091] gi|121052402|emb|CAM08735.1| L-lactate dehydrogenase [Neisseria meningitidis Z2491] gi|161595802|gb|ABX73462.1| L-lactate dehydrogenase [Neisseria meningitidis 053442] gi|304338679|gb|EFM04796.1| L-lactate dehydrogenase [Neisseria meningitidis ATCC 13091] gi|308389495|gb|ADO31815.1| L-lactate dehydrogenase [Neisseria meningitidis alpha710] gi|319410640|emb|CBY91010.1| L-lactate dehydrogenase (cytochrome) [Neisseria meningitidis WUE 2594] gi|325128434|gb|EGC51315.1| L-lactate dehydrogenase [Neisseria meningitidis N1568] Length = 390 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|325136466|gb|EGC59072.1| L-lactate dehydrogenase [Neisseria meningitidis M0579] gi|325208334|gb|ADZ03786.1| L-lactate dehydrogenase [Neisseria meningitidis NZ-05/33] Length = 416 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 63 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 120 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 121 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 177 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 178 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 235 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 236 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 292 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 293 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 335 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 336 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 395 Query: 322 KRVQE 326 + +Q+ Sbjct: 396 RDIQD 400 >gi|298292487|ref|YP_003694426.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] gi|296928998|gb|ADH89807.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] Length = 369 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 119/355 (33%), Gaps = 70/355 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I N++ FD L R L F + G+ +P+L++ + + Sbjct: 37 AADEITIRWNREAFDRLKLRTRVLG--DFSGGGTGLTLFGQAFDYPILLAPTA---HHRL 91 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 +A A + M V ++ + + A S R+ A T L L +Q + Sbjct: 92 ATPEAEIATVVGAGGARAGMVVSTESDLTLEEIAQAS---RRMAAPTPLWFQL-YIQHDR 147 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP------------------LQEIIQPNGNT------ 166 F + +A G L + ++ L E G Sbjct: 148 GFTAELVRRA-ETAGYGALVVTVDAPVFSPRNREQRAGYEPPKLSEHANTRGLHTDYVAE 206 Query: 167 -------NFADLSS------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 F IA L S +P+LLK + ++ D EL + G + Sbjct: 207 AALGESLMFRGYLDVTARWADIAWLRSIARLPILLKGI---MAPEDAELAIGHGADGIVV 263 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + + D+ + + + GG+R G D+ Sbjct: 264 SNHGGRVLDTMPASLDVLPAV-----------------LQQVAGRVPVLMDGGIRRGTDV 306 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK++ LGAS + P L A+ V + LR E V+M L G + + ++ Sbjct: 307 LKALALGASAVMVGRPCLYGLAVAGPAGVAHVLHLLRCELEVAMVLAGCRTLADI 361 >gi|24214188|ref|NP_711669.1| putative glycolate oxidase [Leptospira interrogans serovar Lai str. 56601] gi|24195089|gb|AAN48687.1| putative glycolate oxidase [Leptospira interrogans serovar Lai str. 56601] Length = 760 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 116/320 (36%), Gaps = 43/320 (13%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N ++ ++ + + E + V FLGKK P++ + MTG + +N Sbjct: 455 FQDNINALREYSILPKYIREHTQASV--ETHFLGKKFRTPVMAAPMTG----AVTNMNGA 508 Query: 79 LAIAAEKTKVAMA--VGSQRVMFSDHNAIKSF-----ELRQYAPHTVLISNLGAVQLNYD 131 + + D + + + +R+ VLI D Sbjct: 509 MDEFTFAATLLEGCHTSGTLAWLGDGASPEKYLIMLEAIRKTKADAVLICK-----PRED 563 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLL 188 G+ + + L + ++ + N + + SK+A + S +P ++ Sbjct: 564 EGL-LKERFQESEKSGLLAIGMDVDAVNFKTMTLKNISSITRNVSKLAKIRSFTKLPFIV 622 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ D +L + +G ++ GG + + S GI + Sbjct: 623 KGI---MTPQDAQLAIDAGADCIVVSNHGGRVLDDMPGTARVLS---------GIRNVI- 669 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 ++ Q +A GG+R+G+D+ K I LGA + P A+ V I Sbjct: 670 -------GDKIQIVADGGVRSGMDVFKMIALGADTVLVGRPMAIFAVGGGVAGVRFLISQ 722 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 + SM + GT+ ++++ Sbjct: 723 YTDNLLQSMNVTGTETLKDI 742 >gi|261377489|ref|ZP_05982062.1| L-lactate dehydrogenase [Neisseria cinerea ATCC 14685] gi|269146219|gb|EEZ72637.1| L-lactate dehydrogenase [Neisseria cinerea ATCC 14685] Length = 390 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 115/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L + + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VDMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|159794907|pdb|2NLI|A Chain A, Crystal Structure Of The Complex Between L-Lactate Oxidase And A Substrate Analogue At 1.59 Angstrom Resolution gi|159794908|pdb|2NLI|B Chain B, Crystal Structure Of The Complex Between L-Lactate Oxidase And A Substrate Analogue At 1.59 Angstrom Resolution Length = 368 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 102/315 (32%), Gaps = 49/315 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-VM 98 + D S E LG K+ P +++ + + A A + M++ + Sbjct: 64 DVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTK-EAGTARAVSEFGTIMSISAYSGAT 122 Query: 99 FSDHNAI-----KSFEL----------------RQYAPHTVLISNLGAVQLNYDFGVQKA 137 F + + + F++ + ++++ V N D V+ Sbjct: 123 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKN- 181 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + V+ G + +L E + N G + I ++ +P+ +K + Sbjct: 182 -KFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQH- 239 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D ++ +K G ++ G D I Sbjct: 240 --PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAE-----------------R 280 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFI 313 + G+R G + K++ GA + L P L A+ + ++ +K+ Sbjct: 281 VNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLT 340 Query: 314 VSMFLLGTKRVQELY 328 M L G++ V++L Sbjct: 341 RVMQLTGSQNVEDLK 355 >gi|310778545|ref|YP_003966878.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ilyobacter polytropus DSM 2926] gi|309747868|gb|ADO82530.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ilyobacter polytropus DSM 2926] Length = 338 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 115/321 (35%), Gaps = 46/321 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI---- 81 + L + L S + S G+KLS P++ + +TG M + I Sbjct: 52 LKNIKLSMKTLH--SATNPNTSFSIFGEKLSIPVITAPITGTKFNMGGSVTDEEYINDVV 109 Query: 82 --AAEKTKVAMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + + +AM G A L++ + I + + Sbjct: 110 FGSIDAGTIAMIGDTGDSSCYVHGIEA-----LKKSKGKGIAI-------IKPRENSEII 157 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 ++ A L + ++ + G ++ L + ++P ++K V Sbjct: 158 YRIKMAEEAGALAVGVDIDGAGLVTMKLFGQPVGPKTPEELKELIESTELPFIVKGV--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS + ++ +K+G ++ GG + + ++ DI + Sbjct: 215 LSVEEAKICVKAGASAIVVSNHGGRVLNHTLAPCEVLKDI-----------------VKA 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFI 313 ++ +A G +R G D++K I LGA + P + ++ + V +E+++ + Sbjct: 258 VGDDIIVLADGNVREGADVIKYIALGAKGVLIGRPVIWGSIGGRQEGVKTILETIKSQLY 317 Query: 314 VSMFLLGTKRVQELYLNTALI 334 M L G+ ++ + + ++ Sbjct: 318 QGMILTGSHSIEAIDKDKIIL 338 >gi|204928721|ref|ZP_03219920.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322154|gb|EDZ07352.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 396 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ L KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLLEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|119389267|pdb|2DU2|A Chain A, Crystal Structure Analysis Of The L-Lactate Oxidase gi|119389268|pdb|2DU2|B Chain B, Crystal Structure Analysis Of The L-Lactate Oxidase gi|119389269|pdb|2DU2|C Chain C, Crystal Structure Analysis Of The L-Lactate Oxidase gi|119389270|pdb|2DU2|D Chain D, Crystal Structure Analysis Of The L-Lactate Oxidase gi|161172121|pdb|2E77|A Chain A, Crystal Structure Of L-Lactate Oxidase With Pyruvate Complex gi|161172122|pdb|2E77|B Chain B, Crystal Structure Of L-Lactate Oxidase With Pyruvate Complex gi|161172123|pdb|2E77|C Chain C, Crystal Structure Of L-Lactate Oxidase With Pyruvate Complex gi|161172124|pdb|2E77|D Chain D, Crystal Structure Of L-Lactate Oxidase With Pyruvate Complex gi|185177703|pdb|2ZFA|A Chain A, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus Viridans gi|185177704|pdb|2ZFA|B Chain B, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus Viridans gi|849022|dbj|BAA09172.1| lactate oxidase [Aerococcus viridans] Length = 374 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 102/315 (32%), Gaps = 49/315 (15%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-VM 98 + D S E LG K+ P +++ + + A A + M++ + Sbjct: 70 DVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTK-EAGTARAVSEFGTIMSISAYSGAT 128 Query: 99 FSDHNAI-----KSFEL----------------RQYAPHTVLISNLGAVQLNYDFGVQKA 137 F + + + F++ + ++++ V N D V+ Sbjct: 129 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKN- 187 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + V+ G + +L E + N G + I ++ +P+ +K + Sbjct: 188 -KFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQH- 245 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D ++ +K G ++ G D I Sbjct: 246 --PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAE-----------------R 286 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFI 313 + G+R G + K++ GA + L P L A+ + ++ +K+ Sbjct: 287 VNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLT 346 Query: 314 VSMFLLGTKRVQELY 328 M L G++ V++L Sbjct: 347 RVMQLTGSQNVEDLK 361 >gi|322612863|gb|EFY09815.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618928|gb|EFY15815.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625295|gb|EFY22122.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630038|gb|EFY26811.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634229|gb|EFY30964.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635870|gb|EFY32579.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643044|gb|EFY39620.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643829|gb|EFY40378.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649821|gb|EFY46244.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653027|gb|EFY49362.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661154|gb|EFY57382.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662357|gb|EFY58570.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667235|gb|EFY63401.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674388|gb|EFY70481.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678404|gb|EFY74465.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680910|gb|EFY76944.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687154|gb|EFY83127.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192114|gb|EFZ77347.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198203|gb|EFZ83310.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200823|gb|EFZ85893.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206577|gb|EFZ91535.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210510|gb|EFZ95396.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216202|gb|EGA00930.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220425|gb|EGA04879.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225288|gb|EGA09522.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228402|gb|EGA12533.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234223|gb|EGA18311.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237208|gb|EGA21275.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244727|gb|EGA28731.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249208|gb|EGA33126.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250919|gb|EGA34795.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256717|gb|EGA40445.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262257|gb|EGA45818.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264532|gb|EGA48036.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268822|gb|EGA52280.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 396 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ L KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLLEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|2239174|emb|CAA68903.1| lactate oxidase [Streptococcus iniae] Length = 403 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 107/355 (30%), Gaps = 66/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ LI L + + F+G KL+ P++++ + Sbjct: 52 AGDTFTLHENIRSFNH-KLIPHGLKG--VENPSTEITFIGDKLASPIILAPVA------A 102 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHNAIKS-------FELRQYAPHTV--- 118 ++ A V + S ++ F+ + Sbjct: 103 HKLANEQGEIASAKGVKEFGTIYTTSSYSTTDLPEISQTLGDSPHWFQFYYSKDDGINRH 162 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + PNG D Sbjct: 163 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PNGAGKTMDYVY 220 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 221 KATKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 277 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 278 GPAAFDSLQEVAE-----------------SVDRRVPIVFDSGVRRGQHVFKALASGADL 320 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E + E + M L GT+ + + L N Sbjct: 321 VALGRPVIYGLAMGGSVGTRQVFEKINDELKMVMQLAGTQTIDDVKHFKLRHNPY 375 >gi|332707880|ref|ZP_08427895.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] gi|332353346|gb|EGJ32871.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] Length = 382 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 121/368 (32%), Gaps = 74/368 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN ++D L+ L ++VD SVE +G+KL PL + T Sbjct: 32 ADDEVTYRRNAAAYEDVDLVPSVLAG--VEDVDMSVEVMGQKLDMPLYCAP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSD--------HNAIKSFELRQYAPHTVLISNLG 124 R +A AA K + S + ++ + + + +T L+ Sbjct: 89 HEGERAVARAATKYGTMFGISSLATVSAEEIAEIAPGPKMFQFYFHKDKGVNTALLERAR 148 Query: 125 AVQLNY-------------DFGVQKAHQAVHVLGADGL---FLH--------------LN 154 A + N + ++ A L + H + Sbjct: 149 AAKFNVMALTVDTITGGNRERDLRNGFTAPPALTPSSILRFATHPSWAWNFLTKEKFDMP 208 Query: 155 PLQEIIQPNGNT------NFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L E + GNT F++L + L +A + LK + +S D + Sbjct: 209 HLAEATRGGGNTVSFVSHYFSNLLDQSMNWKDAEKLCAAWNGQFALKGI---MSVEDAKR 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G ++ GG + D ++I ++ I Sbjct: 266 AVDIGCTGIMVSNHGGRQLDGSRAPFDQLAEI-----------------CDAVGDKIDVI 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG++ G LK++ +GA +L A V A+ +LR E M L+G Sbjct: 309 CEGGIQRGTHALKALSVGAKAVSGGRLYLYALAAAGQAGVERALGNLRTEIERDMKLMGA 368 Query: 322 KRVQELYL 329 KRV +L Sbjct: 369 KRVSDLTR 376 >gi|254805172|ref|YP_003083393.1| L-lactate dehydrogenase [Neisseria meningitidis alpha14] gi|254668714|emb|CBA06502.1| L-lactate dehydrogenase [Neisseria meningitidis alpha14] Length = 413 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 60 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 117 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 118 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 174 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 175 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 232 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 233 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 289 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 290 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 332 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 333 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 392 Query: 322 KRVQE 326 + +Q+ Sbjct: 393 RDIQD 397 >gi|160900052|ref|YP_001565634.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] gi|160365636|gb|ABX37249.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] Length = 393 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 119/352 (33%), Gaps = 63/352 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ +D L R L ++ ++ LG++L+ PLL++ M +M Sbjct: 58 AADERSLAANRSAWDALPLWPRVLRPLAGGH--TRLQLLGRELACPLLVAPMA--FQRMA 113 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A A V S + + R H L L +Q + F Sbjct: 114 HEDAELATAYAAAALGAGMVLSTQASLPLETVAQ--AARLTPGHGPLWFQL-YLQHDRGF 170 Query: 133 GVQKAHQAVHVLGADGLFLHLNP------------------------LQEI-------IQ 161 Q +A G + L L ++ LQ + + Sbjct: 171 TTQLIKRA-EAAGYEALVLTVDAPTSGVRDRERRARFCLPPGVSAVNLQGMAPLAAMQLA 229 Query: 162 PNGNTNFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + F L +A L +PLLLK V L S D + G+ ++ Sbjct: 230 PGQSALFDGLLHHAPTWDDVAWLQQQTRLPLLLKGV---LHSADALQAARLGVAGIIVSN 286 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + + + R +E +A GG+R G D+LK Sbjct: 287 HGGRTLDTAPATATALARVA--------------RAVRGAGHELPLLADGGIRRGTDVLK 332 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +I LGA+ + P L A + V + LR E ++M L G + + Sbjct: 333 AIALGATAVLIGRPVLWGLANAGAAGVAHVLRLLRDELEIAMALTGCATLAQ 384 >gi|221066182|ref|ZP_03542287.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni KF-1] gi|220711205|gb|EED66573.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni KF-1] Length = 380 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 110/355 (30%), Gaps = 63/355 (17%) Query: 9 HINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 HI + + N++ FD + L L + LG+ L +PLL++ + Sbjct: 45 HIESGADQGLTLAHNRQAFDRFRLCPEPLA--DLSDAHTRQSLLGRSLDWPLLLAPVA-- 100 Query: 68 NNKMIERINRNLAIAAEKTKV--AMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 + + LA A + M V + ++ L L Sbjct: 101 -YQQLAHPEGELATARAAMAMRTGMVVSTLSSYTLEAIAQAAQAAAQELGRSGPLWFQL- 158 Query: 125 AVQLNYDFGVQKAHQAVHV---------------------LGADGLFLHLNPLQE----- 158 Q + +Q +A G + + LH P Q Sbjct: 159 YQQAAREHTLQLIRRAEDAGYQALVWTVDAHIKRSSYPLPPGVEAVNLHGMPRQSQSGDL 218 Query: 159 -----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + L +PL++K + LS+ ++ G + Sbjct: 219 MSEHILFGSELARGAPTWDD-LVWLRQQTRLPLIVKGL---LSARAAAKAVELGADAIVV 274 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG S ++ ++ A P + GG+R G D+ Sbjct: 275 SNHGGRVLDSAVSALEVLP---------------AIREATPA--HIPLLMDGGVRQGTDV 317 Query: 274 LKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LK+I LGAS L P + A+ V + LR E ++M G + ++ Sbjct: 318 LKAIALGASAVLLGRPQMHALAVAGMLGVAHMLYLLRAELELAMAQTGCASLDQI 372 >gi|306829151|ref|ZP_07462341.1| L-lactate oxidase [Streptococcus mitis ATCC 6249] gi|304428237|gb|EFM31327.1| L-lactate oxidase [Streptococcus mitis ATCC 6249] Length = 378 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 111/355 (31%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A +++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAAYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA+L Sbjct: 267 GPASFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGQLVFKALASGANL 309 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E L E M L GT+ +++ L N Sbjct: 310 VAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIEDVKHFKLRHNPY 364 >gi|291301178|ref|YP_003512456.1| L-lactate dehydrogenase (cytochrome) [Stackebrandtia nassauensis DSM 44728] gi|290570398|gb|ADD43363.1| L-lactate dehydrogenase (cytochrome) [Stackebrandtia nassauensis DSM 44728] Length = 409 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 114/369 (30%), Gaps = 86/369 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F+D L VD E LG++++ P I+ TG M Sbjct: 58 AEAELSLARARQAFEDIEFNPTIL--RDVSSVDTGWEVLGERVALPFGIAP-TGFTRLMQ 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A AAE + A+ + + ++ +P+ L + + D Sbjct: 115 TEGEIAGATAAEAVGIPFAL----STLATTSIED---VKAASPNGRHWFQL-YMWKDRDR 166 Query: 133 GVQKAHQAVHVLGADGLFLHLN-----------------PLQEII--QPNGNTNFADLS- 172 + +A G D L + ++ P Q + N T A Sbjct: 167 SMALVERAA-AAGYDTLMVTVDTPVAGARLRDKRNGFSIPPQLTLKTMLNTATRPAWWFN 225 Query: 173 ---------------------------------SKIALLSSAMDVPLLLKEVGCGLSSMD 199 +A + +++K V + D Sbjct: 226 LLTTEPLSFASLDRWPGTVAELLDTMFDPTVDFDDLAWIKQQWPGKIVVKGVQ---NLAD 282 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ GG R L +PT R + Sbjct: 283 AKRLADLGVDGVVLSNHGGRQLDRAPVPFHL------------LPTV-----VREVGADM 325 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 + G+ +G DI+ S+ LGA + +L M V IE L ++ + +M L Sbjct: 326 EVHVDTGIMSGADIVASVALGARFTLVGRAYLYGLMAGGRRGVDKTIEILSEQVVRTMRL 385 Query: 319 LGTKRVQEL 327 LG ++EL Sbjct: 386 LGVSSLEEL 394 >gi|205354703|ref|YP_002228504.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858931|ref|YP_002245582.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|259494494|sp|B5R5C7|LLDD_SALEP RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494495|sp|B5RGI4|LLDD_SALG2 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|205274484|emb|CAR39517.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710734|emb|CAR35095.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629842|gb|EGE36185.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 396 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|75907652|ref|YP_321948.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Anabaena variabilis ATCC 29413] gi|75701377|gb|ABA21053.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Anabaena variabilis ATCC 29413] Length = 366 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 120/359 (33%), Gaps = 71/359 (19%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 I+ + + N+ F+ L R L + +++ + LG+ L PLLI+ M Sbjct: 30 ISGAGDEITLQENRTAFERIKLRPRML--VDVSQINLTTSVLGQPLQLPLLIAPMA---F 84 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + + LA A + VG S + + E+ ++ L + + Sbjct: 85 QCLAHAEGELATAMAAA--SAGVGMVLSTLSTKSLEEVAEVGSKFSDSLQWFQL-YIHKD 141 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT----------------------- 166 +A G L L ++ + Q + Sbjct: 142 QGLTRALVERAYTA-GYKALCLTVDAP-VLGQRERDRRNEFALPPGLDLANLATISGLDI 199 Query: 167 -----------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 N A + L S +PL+LK + G D ++ G + Sbjct: 200 PYVPGESGLLTYFAQQLNSALTWEDLEWLQSLSPLPLVLKGILRG---DDAARAVEYGAK 256 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + D +I +A+ + GG+R Sbjct: 257 AIVVSNHGGRQLDGAIASLDALPEI-----------------VAAVNGKAEVLLDGGIRR 299 Query: 270 GVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI+K++ +GA + P L A+ V I L+KE V+M L+G ++Q++ Sbjct: 300 GTDIIKALAIGAQAVLIGRPILWGLAVGGQAGVSHVISLLQKELNVAMALMGCSQLQDI 358 >gi|299533541|ref|ZP_07046917.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] gi|298718447|gb|EFI59428.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] Length = 375 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 107/356 (30%), Gaps = 65/356 (18%) Query: 9 HINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 H+ + + N++ FD L L LG+ L +PLL++ + Sbjct: 40 HLESGADQGLTLAHNRQAFDRIRLCPEPLA--DLSSAHTRQSLLGQSLDWPLLLAPVA-- 95 Query: 68 NNKMIERINRNLA--IAAEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLG 124 + + LA AA + M V + + ++ L L Sbjct: 96 -YQRLAHPEGELATVRAAMAMRTGMVVSTLSSCTLEEIAQAAQAAAQELGRSGPLWFQL- 153 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLN-----------PLQEIIQPNGNTNFADL-- 171 Q + +Q +A G L ++ P E + G Sbjct: 154 YQQPTREHTLQLIRRA-EDAGYQALVWTVDAHIKRSSYPLPPGVEAVNLRGIPQQRQTGD 212 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L +PL++K + LS+ + ++ G + Sbjct: 213 LMSEHILFGSELARGAPTWDDLVWLRQQTRLPLIVKGL---LSARAVAQVVELGADAIVV 269 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVD 272 + GG + L R + GG+R G D Sbjct: 270 SNHGGRVLDTA------------------VSALEVLPAIRAATPAHIPLLMDGGVRQGTD 311 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +LK+I LGAS L P + A+ V + LR E ++M G + ++ Sbjct: 312 VLKAIALGASAVLLGRPQMHALAVAGMVGVAHMLYLLRVELELAMAQTGCASLDQI 367 >gi|257888181|ref|ZP_05667834.1| L-lactate oxidase [Enterococcus faecium 1,141,733] gi|257824235|gb|EEV51167.1| L-lactate oxidase [Enterococcus faecium 1,141,733] Length = 366 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 112/349 (32%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 42 DEWTMKENTTSFNAKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 100 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDGF---NEFILNKA 156 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 157 VEAGSKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 216 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + ++P+++K + S D + + +G ++ GG Sbjct: 217 AKQGLTPDDIKTIKEITNLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 273 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 274 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 316 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 317 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKSIDEVKNTKLM 365 >gi|319403685|emb|CBI77270.1| L-lactate dehydrogenase [Bartonella rochalimae ATCC BAA-1498] Length = 383 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 113/371 (30%), Gaps = 73/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L ++ +VD S E LG+KL P++++ + TG + Sbjct: 29 AYAEETMRRNCTDLQELALRQRILKQVG--DVDFSTEILGQKLGMPIVLAPVGLTGMYAR 86 Query: 71 MIE----------------------RINRNLAIAAEKTKVAMAV----GSQRVMFSDHNA 104 E I+ A ++ + V G R + A Sbjct: 87 RGEVKAARAAVAKGIPFTLSSVSVCPISEVHAAVGKEFWFQLYVLKDRGFMRDVLERSWA 146 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------N 154 L V + + + + ++ N Sbjct: 147 SGVRTLVFTVDMPVPGARYRDAHSGMSGPYAGLRRIIQFIFHPHWAWNVGVMGHPHDLGN 206 Query: 155 PLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + ++ + + ++LK + L D + Sbjct: 207 VSTYLKKKTTLKDYIGWLGANFDPSISWGDLQWIRDFWKGKMILKGI---LDPEDAREAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L ++A + + Sbjct: 264 RFGADGIVVSNHGGRQLDGV------------------LSTARALPKIADIIKGDLTILV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G+D+++ I GA + F+ A V +E +E V+M L G + Sbjct: 306 DSGIRSGLDVVRMIAQGADAVMIGRAFVYALAAAGEKGVTHLLELFSQEMRVAMTLTGVR 365 Query: 323 RVQELYLNTAL 333 ++E+ + Sbjct: 366 TIKEITRENLV 376 >gi|15806052|ref|NP_294755.1| (S)-2-hydroxy-acid oxidase [Deinococcus radiodurans R1] gi|6458759|gb|AAF10604.1|AE001954_8 (S)-2-hydroxy-acid oxidase [Deinococcus radiodurans R1] Length = 353 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 119/345 (34%), Gaps = 59/345 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ + L R L + +D S LG L+FP+ ++ + Sbjct: 31 ANDEHTLRENREGYARLKLRPRML--VDVSHIDTSTTVLGLPLAFPVGVAPCA---LHGL 85 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLI 120 + +A A + + S + + + ++ R+ + V Sbjct: 86 VHPDAEVATARAAASLGSLMTLSTMSHRTIEDVSDAAGGQFWFQLYLYKDREVSRALVQR 145 Query: 121 SN---LGAVQLNYDFGV----QKAHQAVHVLGADGL----------FLHLNPLQEIIQPN 163 + A+ L D V + + + + HL+ LQ + Sbjct: 146 AEAAGARALVLTVDAPVLGRREAIIRTPVHIEPGTVLPNIGPRVPGSEHLDDLQYF---D 202 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + A + I L +P++LK + L++ D+ L ++ G + GG Sbjct: 203 SLLDPAITWNDIGWLRGITGLPIVLKGL---LTAEDVALAVQHGCH-IWASNHGGRQLDT 258 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D +I A+ GG+ G D+LK++ LGA+ Sbjct: 259 AVTALDALPEIAE-----------------AANGRAEIYLDGGVTRGTDVLKALALGANA 301 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LA L A+ D +E LR E ++M L G +V EL Sbjct: 302 VFLARAVLYGLALAGEDGARHTLELLRDEVRLAMMLCGKTQVSEL 346 >gi|261400316|ref|ZP_05986441.1| L-lactate dehydrogenase [Neisseria lactamica ATCC 23970] gi|269209936|gb|EEZ76391.1| L-lactate dehydrogenase [Neisseria lactamica ATCC 23970] Length = 390 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTQRRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKDVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE VSM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|91780295|ref|YP_555502.1| (S)-2-hydroxy-acid oxidase [Burkholderia xenovorans LB400] gi|91692955|gb|ABE36152.1| (S)-2-hydroxy-acid oxidase [Burkholderia xenovorans LB400] Length = 439 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 99/357 (27%), Gaps = 78/357 (21%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 F + + R L + V V G+ P I+ M GG + LA A Sbjct: 79 AFLAYRFVPRVL--CNVARVQQHVTVFGRSYQSPFGIAPM-GGVALTAYDGDLALARGAA 135 Query: 85 KTKVAMAVG---------------------------SQRVMFSDHNAIKSFE-------- 109 + M V D A +E Sbjct: 136 HADIPMVVSGAALTSLEAIRAQASNAWFQAYLSADRDADAALLDRVAAAGYETLVVTVDV 195 Query: 110 ----LRQYAPH----TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN------- 154 R++ L N L G+ + N Sbjct: 196 PVAANREHNKRSGYTAPLRPNAALAWQALTHPRWLVGTLARTLLMGGVPRYRNLAAGNGA 255 Query: 155 --PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 E D +A + L+LK + LS+ D + + G+ Sbjct: 256 RVFSSEAAHQFSRRAAFDWQD-LARIRQRWRGNLVLKGI---LSAADTVIAREHGVDGVI 311 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG R L+S I + T L + G+R G D Sbjct: 312 VSNHGG---------RQLDSAIAPL-------TV--LPEIVDAAAGLTVMIDSGIRRGTD 353 Query: 273 ILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 ILK++ LGA + + PF A+ + V LR E M LLG + L+ Sbjct: 354 ILKALALGAQMVFIGRPFNFAAAVGGAPGVAHLAALLRDEIARDMALLGVSTLDALH 410 >gi|46104760|ref|XP_380321.1| hypothetical protein FG00145.1 [Gibberella zeae PH-1] Length = 424 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 114/347 (32%), Gaps = 88/347 (25%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE---RINRNLAIAAEKTKVAMAVGSQR 96 + +D S GK P+ I+ ++ I+ A A +T + + S Sbjct: 59 NISSIDTSTRIFGKYYDIPIAIAPSA--YQRLAGYNGEIDVARAAFARRTNICL---SSN 113 Query: 97 VMFSDHNAIKSFELRQ-YAPHT-VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL- 153 S + ++ R P + + + + + +++A +A G + L L + Sbjct: 114 ATTSLEDVAQALPKRDGKYPKPWFQLYFVRSRDITKEL-IERAERA----GYEALVLTVD 168 Query: 154 ------------NPLQ---EIIQPN--------------------------GNTNFAD-- 170 NPL+ ++ N +D Sbjct: 169 TTTMGNRLHERKNPLKLPADLSMANMTTIKGGGASKGRLILNAETAEEAAKIEREHSDLL 228 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + I L S ++ ++LK + L++ D L +++G+ ++ GG + Sbjct: 229 IDSALTWAETIPWLRSQTNMKIILKGI---LTAEDALLSVEAGVDAIIVSNHGGRQLDSV 285 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASL 283 + T +L + GG+ G D+ K++ LGA L Sbjct: 286 PA------------------TLEALPEVSDAVKGRIPVLYDGGISKGSDVFKALALGADL 327 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L L A++ V + L +E +M L G ++++ Sbjct: 328 CLLGQSALWGLAVNGQQGVETVLNILERELWRTMVLSGAAAIKDISR 374 >gi|317491093|ref|ZP_07949529.1| FMN-dependent dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920640|gb|EFV41963.1| FMN-dependent dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 381 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 33/187 (17%) Query: 162 PNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ S + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLASNFDPSISWSDLEWIRDFWDGPMIIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + + +A G+R+G Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIKILADSGIRSG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V + + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADSVLLGRAYLYALATAGQAGVENLLGLIEKEMRVAMTLTGAKSIAEISR 372 Query: 330 NTALIRH 336 ++ + Sbjct: 373 DSLVQEG 379 >gi|163867562|ref|YP_001608761.1| L-lactate dehydrogenase [Bartonella tribocorum CIP 105476] gi|259494967|sp|A9IN89|LLDD_BART1 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|161017208|emb|CAK00766.1| L-lactate dehydrogenase [Bartonella tribocorum CIP 105476] Length = 383 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 116/371 (31%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L ++ VD S++ ++L P++++ + TG + Sbjct: 29 AYAEETLRRNCSDLQALALRQRILRQVG--GVDLSIKLFEQRLDLPIVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR--VMFSDHNAIK---SFELRQYAPHTVLISNLGA 125 E A AA + + S + A+ F+L + A Sbjct: 87 RGEV---QAAHAATAKGIPFTLSSVSVCPIAEVQEAVGGGFWFQLYVLKDRGFMRD---A 140 Query: 126 VQLNYDFGVQKAHQAVHVL--GADGLFLHL----------NPLQEIIQPN---------- 163 ++ + GV+ V + GA H LQ P+ Sbjct: 141 LERAWASGVRTLVFTVDMPIPGARYRDAHSGMSGPYAGLRRFLQAFTHPHWAWNVGIMGR 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 ++ + + ++LK + L Sbjct: 201 PHDLGNVSTYLEKKIALDDYVGWLGANFDPSIGWHDLQWIRDFWKGKMILKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + T +L +A N Sbjct: 258 DAREAVQFGADGIVVSNHGGRQLDGV------------------LSTARALPAIAEAVKN 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + +A G+R+G+D+++ I GA + F+ A V ++ E V+M Sbjct: 300 DLVILADSGVRSGLDVVRMIAQGADAVMIGRAFVYALAAAGEKGVAHLLDLFANEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L G + ++E+ Sbjct: 360 TLTGAQTLKEI 370 >gi|212723378|ref|NP_001131364.1| hypothetical protein LOC100192687 [Zea mays] gi|194691324|gb|ACF79746.1| unknown [Zea mays] Length = 221 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 23/164 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K + +++ D L ++ G ++ G + + Sbjct: 68 WKDVKWLQTITSLPILVKGI---VTAEDTRLAIEYGAAGIIVSNHGARQLDYVPA----- 119 Query: 232 SDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T LE AR GG+R G D+ K++ LGAS + P Sbjct: 120 -------------TISCLEEVAREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPV 166 Query: 291 L-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L A+D V ++ LR E ++M L G ++E+ + Sbjct: 167 LFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLREITRAHVI 210 >gi|189195198|ref|XP_001933937.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979816|gb|EDU46442.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 508 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 106/343 (30%), Gaps = 86/343 (25%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN----LAIAAEKTKV-------AMAVG 93 D S FL + P+ +S M N + +A A + A Sbjct: 163 DTSTTFLSHPVKLPIYVSPAA-----MARLANADGEWGIAQACSQYGAMQIISQNASMTP 217 Query: 94 SQRVMFSDHNAIKSFEL---RQYAPHTVLISNLGAVQ------LNYDFGVQKAHQAVHVL 144 Q V + + ++L + A +++ + ++ L D V + Sbjct: 218 EQIVADATPGQVFGWQLYVQNERAKSEAMLARMNKLECIKFICLTLDAPVPGKREHDERS 277 Query: 145 GADGLFLHLNP-LQEI--------------------------IQPNGNTNFAD------L 171 G L + +QE G + F Sbjct: 278 KNIGSNLPVRAAVQESQSVSKTSMSAQTPSSDADVNGKPKPKSMGVGQSLFWGTAADLTW 337 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + L +P++LK + + D L ++ ++ GG + Sbjct: 338 RTTLPWLREHTHLPIVLKGIQ---THEDAYLASLHAPHVKAIILSNHGGRALDTAP---- 390 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 P +L R YC E + GG++ G D++K++ LGA G Sbjct: 391 --------------PAVHTLLEIRKYCPEVFDRVEVWVDGGIKRGTDVVKALCLGARGVG 436 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + L + V +E L+ E M LLG +RV +L Sbjct: 437 VGRAALFGLGAGGKEGVARVLEILKAETETCMRLLGVERVDQL 479 >gi|62182188|ref|YP_218605.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309549|sp|Q57ID8|LLDD_SALCH RecName: Full=L-lactate dehydrogenase [cytochrome] gi|62129821|gb|AAX67524.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716676|gb|EFZ08247.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|332662608|ref|YP_004445396.1| Lactate 2-monooxygenase [Haliscomenobacter hydrossis DSM 1100] gi|332331422|gb|AEE48523.1| Lactate 2-monooxygenase [Haliscomenobacter hydrossis DSM 1100] Length = 423 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 82/235 (34%), Gaps = 36/235 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 D NA R +L + +VQ G + ++ +GA LF+ Sbjct: 218 AKLQDPNAAG--PPRPPLTMQLLKGLISSVQRYPGKGFLQKLRSGRPMGAVQLFV----- 270 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 Q P +A L +P+LLK + L D L G+ ++ Sbjct: 271 QTYSNPAIT------WEDLAFLREHTKLPILLKGI---LHPDDARKALDYGMNGIVVSNH 321 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILK 275 GG I +L + + I G+R G D+ K Sbjct: 322 GGRQVDGA------------------ISAIEALPGVVEAVNKQVPVILDSGIRGGADVFK 363 Query: 276 SIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++ LGAS GL P++ + V + L +F ++M L G +RV+E+ Sbjct: 364 ALALGASAVGLGRPYVYGLTLGGQQGVYEVLRHLMADFELTMRLAGCRRVEEIER 418 Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Query: 6 KIDH------INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL 59 K+DH + + N+ F W ++ R L + ++ D S+ G+ S P Sbjct: 37 KMDHKAAGYIVGGAGLQETVAANRSGFAQWKIVPRML--RNVEQSDTSINLFGQTFSSPF 94 Query: 60 LISSM 64 + + Sbjct: 95 WLCPI 99 >gi|223948343|gb|ACN28255.1| unknown [Zea mays] Length = 221 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 23/164 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K + +++ D L ++ G ++ G + + Sbjct: 68 WKDVKWLQTITSLPILVKGI---VTAEDTRLAIEYGAAGIIVSNHGARQLDYVPA----- 119 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T LE R GG+R G D+ K++ LGAS + P Sbjct: 120 -------------TISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPV 166 Query: 291 L-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L A+D V ++ LR E ++M L G ++E+ + Sbjct: 167 LFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLREITRAHVI 210 >gi|190892878|ref|YP_001979420.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190698157|gb|ACE92242.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 380 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 118/372 (31%), Gaps = 69/372 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTESTYRANESDFSRIKLRQRVL--VDMSDRTLETTMVGQKVSMPVGLAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS----FELRQYAPHTVLISNLGAVQ 127 A AAE+ V + + + D ++ + F+L ++ + + Sbjct: 87 ADGEMLAARAAEEFGVPFTLSTMSICSIEDVASVTTRPFWFQLYVMRDKDFVLGLINRAK 146 Query: 128 LN----------------YDFGVQKAHQAVHVLGADGL-------FLHLNPLQEIIQPNG 164 ++ A L F L+ LQ + G Sbjct: 147 AAKCSALVLTADLQILGQRHKDLRNGLSAPPRFTPKHLWQMASRPFWCLDMLQTRRRTFG 206 Query: 165 N-----TNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 N N ++++S A D L +V L D + Sbjct: 207 NIIGHAKNVSNITSLAAWTHEQFDPRLSWADVAWIKEQWGGPLIIKGVLDPEDARAAADT 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + I + + GG Sbjct: 267 GADAIVVSNHGGRQLDGAPSSISMLPAI-----------------VDAVGDRIEIHLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ LGA + PFL + V A+ +RKE ++M L G + + Sbjct: 310 IRSGQDVLKAVALGAKGTYIGRPFLYGLGAMGKEGVTLALGIIRKEMDITMALCGKRDIN 369 Query: 326 ELYLNTALIRHQ 337 + +N ++I Q Sbjct: 370 D--VNASIISGQ 379 >gi|194446309|ref|YP_002042943.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|259491769|sp|B4SXA4|LLDD_SALNS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194404972|gb|ACF65194.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|161505772|ref|YP_001572884.1| L-lactate dehydrogenase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|259494492|sp|A9MLC3|LLDD_SALAR RecName: Full=L-lactate dehydrogenase [cytochrome] gi|160867119|gb|ABX23742.1| hypothetical protein SARI_03948 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|16762615|ref|NP_458232.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144104|ref|NP_807446.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213427160|ref|ZP_03359910.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213647894|ref|ZP_03377947.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289811226|ref|ZP_06541855.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289826011|ref|ZP_06545169.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853191|sp|Q8Z2E5|LLDD_SALTI RecName: Full=L-lactate dehydrogenase [cytochrome] gi|25284061|pir||AH0975 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504920|emb|CAD03300.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139741|gb|AAO71306.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|159904260|ref|YP_001551604.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases [Prochlorococcus marinus str. MIT 9211] gi|159889436|gb|ABX09650.1| L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases [Prochlorococcus marinus str. MIT 9211] Length = 390 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 58/379 (15%), Positives = 126/379 (33%), Gaps = 86/379 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + +N F + + R ++ D ++ L ++ P +++ + G+++M Sbjct: 36 ADREQTLSQNCTAFKEIYFRPRC--AVATPSCDLNISVLDQEFKLPFILAPV--GSSRMF 91 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---------SFEL-----RQYAPHTV 118 + +AA + +A G S + ++L R A T+ Sbjct: 92 YP--KGEVVAAREAGIA-GTGYTLSTLSGCRLEEVKQATNCPAWYQLYLLGGRDVAMQTI 148 Query: 119 LISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ----------------EI 159 + A+ + D + + V L NP+Q + Sbjct: 149 ERAKSAGFSAIVVTIDTPISGLRER-DVRNGTKQLLSRNPIQMLPYIPQMLIKPCWLTQW 207 Query: 160 IQPNGNTNFADL----------------------SSKIALLSSAMDVPLLLKEVGCGLSS 197 + G +F ++ + + A +++K + G Sbjct: 208 LGDGGLMSFPNVELESGPMGYTEIGPALEESVVTWEDLNWIREAWGGKIIVKGIHIG--- 264 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYC 256 D + G+ ++ G + PT L E+ + Sbjct: 265 EDARKAIDLGVDAVVVSNHGARQLDSVA------------------PTIQVLPEVVKAVN 306 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVS 315 E + GG+R G D++K++ LGA ++ + A V AIE ++ + + + Sbjct: 307 GEIDVLIDGGIRRGGDVVKALCLGAKGVLISRAYAYGLAAGGGPGVAKAIEIIKTDILRT 366 Query: 316 MFLLGTKRVQELYLNTALI 334 M LLG V++L + I Sbjct: 367 MKLLGCDSVKKLDRSFVTI 385 >gi|168818478|ref|ZP_02830478.1| L-lactate dehydrogenase ( cytochrome) [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344295|gb|EDZ31059.1| L-lactate dehydrogenase ( cytochrome) [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088112|emb|CBY97874.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|161616771|ref|YP_001590736.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168260553|ref|ZP_02682526.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|259491770|sp|A9MVJ5|LLDD_SALPB RecName: Full=L-lactate dehydrogenase [cytochrome] gi|161366135|gb|ABX69903.1| hypothetical protein SPAB_04590 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205350397|gb|EDZ37028.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 396 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|16125645|ref|NP_420209.1| L-lactate 2-monooxygenase [Caulobacter crescentus CB15] gi|221234399|ref|YP_002516835.1| lactate 2-monooxygenase [Caulobacter crescentus NA1000] gi|13422753|gb|AAK23377.1| L-lactate 2-monooxygenase [Caulobacter crescentus CB15] gi|220963571|gb|ACL94927.1| lactate 2-monooxygenase [Caulobacter crescentus NA1000] Length = 391 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 114/356 (32%), Gaps = 66/356 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + RN F DW ++ R + + + D S+E G KL PL +S + G G Sbjct: 50 CGDEFTQRRNADAFHDWGVVPRMM--VDASKRDLSIELFGLKLPTPLFMSPI-GVIGMCA 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFEL 110 + A+AA++T V + + Q D + +S + Sbjct: 107 QDGHGDIATAVAAQRTGVPVMASTLANDPIEKVGAALGDGVGFFQLYTPKDRDLAESL-I 165 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAV-----------HVLGADGLFLHLNPLQEI 159 R+ + + + + A + L + P+ E Sbjct: 166 RRAETAGFKALVVTLDTWVTGWRPRDLNDANFPQLRGHVLQNYFTDPRFLEILGKPVAE- 224 Query: 160 IQPNGNTNFADL------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L +A L SA +P++LK + D + G+ Sbjct: 225 DPATAIRTWGGLFGKTLTWEDLAWLRSATKLPIVLKGICH---PDDARRAVDLGVDGVFC 281 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + GI LE + G+R+G D Sbjct: 282 SNHGGRQ------------------ANGGIAAIDLLEDVVTASGNTPVLFDSGVRSGSDA 323 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 K++ +GA G+ P+ A+ D VV + S+ E + M + G + L Sbjct: 324 AKALAMGARAVGIGRPYAYGLAIGGVDGVVHVLRSILAELDLLMAVDGFPTLAALR 379 >gi|257469395|ref|ZP_05633488.1| FMN-dependent family dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|317063642|ref|ZP_07928127.1| dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313689318|gb|EFS26153.1| dehydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 338 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 119/318 (37%), Gaps = 58/318 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------L 79 + ++ R + + + GK+LSFP L + +TG M + + Sbjct: 52 LKNIKVVMRTIH--DATDPILTTNLWGKELSFPCLGAPITGTKFNMGGGVTEEEYCLDVI 109 Query: 80 AIAAEKTKVAMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG-AVQLNYDFGVQK 136 A + + M G + AIK +N G V + ++ Sbjct: 110 GGAIDAGTIGMIGDTGDASCYLAGLEAIK--------------ANGGMGVAVIKPRSNEE 155 Query: 137 AHQAVHVLG-ADGLFLHLNP-------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 + + + A + + ++ ++ QP G +F +I L+++ +P ++ Sbjct: 156 IIKRIRLAEEAGAVAVGVDVDGAGLITMKLFGQPVGPKSF----EEIKELAASTKLPFMI 211 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + LS + EL +K+G+ ++ GG + + D+ DI Sbjct: 212 KGI---LSVDEAELCVKAGVDTIVVSNHGGRVLNETLAPCDVVEDI-------------- 254 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIES 307 + ++ + G +R GVDILK I LGA + P ++ + V ++ Sbjct: 255 ---VKAVGDKINVLVDGSVREGVDILKYIALGAKGVLVGRPLTWGSIGGRQEGVKTIFDT 311 Query: 308 LRKEFIVSMFLLGTKRVQ 325 L+ + +M L G K + Sbjct: 312 LKGQLTQAMILTGVKDIN 329 >gi|312914720|dbj|BAJ38694.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 396 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|168235301|ref|ZP_02660359.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734323|ref|YP_002116631.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|259491773|sp|B4TZU7|LLDD_SALSV RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194709825|gb|ACF89046.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291426|gb|EDY30778.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 396 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|86358732|ref|YP_470624.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86282834|gb|ABC91897.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 380 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 66/372 (17%), Positives = 120/372 (32%), Gaps = 69/372 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTESTYQANESDFSRIKLRQRVL--VDMSDRTLETTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS----FELRQYAPHTVLISNL---- 123 A AAE+ V + + + D ++ + F+L ++ + Sbjct: 87 ADGEMLAARAAEEFGVPFTLSTMSICSIEDVASVTTRRFWFQLYVMRDKDFVLGLINRAK 146 Query: 124 ----GAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQP--------NGNTNFA 169 A+ L D V Q+ + L A F + Q I+P F Sbjct: 147 AAKCSALVLTADLQVLGQRHKDLRNGLSAPPRFTPKHVWQMAIRPFWCLDMLKTKRRTFG 206 Query: 170 DLSSKIALLSS----------AMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 ++ +S+ D L +V L D + Sbjct: 207 NIIGHAKNVSNITSLAAWTHEQFDPRLSWADVAWIKEQWGGPLIIKGVLDPEDARAAADT 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + I + + GG Sbjct: 267 GADAIVVSNHGGRQLDGAPSSISMLPAI-----------------IDAVGDRIEVHLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ LGA + PFL + V A+ +RKE ++M L G + + Sbjct: 310 IRSGQDVLKAVALGAKGTYIGRPFLYGLGAMGKEGVTLALSIIRKEMDITMALCGKRDIN 369 Query: 326 ELYLNTALIRHQ 337 + +N ++I Q Sbjct: 370 D--VNASIISRQ 379 >gi|16766979|ref|NP_462594.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994313|ref|ZP_02575405.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232537|ref|ZP_02657595.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471842|ref|ZP_03077826.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251856|ref|YP_002148626.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265156|ref|ZP_03165230.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243712|ref|YP_002217656.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|81853650|sp|Q8ZL61|LLDD_SALTY RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494491|sp|B5EXA8|LLDD_SALA4 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494493|sp|B5FLH2|LLDD_SALDC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|16422260|gb|AAL22553.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194458206|gb|EDX47045.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197215559|gb|ACH52956.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243411|gb|EDY26031.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938228|gb|ACH75561.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205327787|gb|EDZ14551.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333248|gb|EDZ20012.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|261248842|emb|CBG26695.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995952|gb|ACY90837.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160230|emb|CBW19752.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321226747|gb|EFX51797.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132054|gb|ADX19484.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625440|gb|EGE31785.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990543|gb|AEF09526.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 396 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|168465000|ref|ZP_02698892.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|200387947|ref|ZP_03214559.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|195632179|gb|EDX50663.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|199605045|gb|EDZ03590.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 396 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|241667408|ref|ZP_04754986.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 382 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 123/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RKI H ++ + ++ N+K FD + + L +I + LG+ Sbjct: 15 RKIYHRRVPKMFVDYCESGSWQQNTLEHNQKDFDKYFFRQKVLTDIQHR--SLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + S PL + + G G I+ A AAE+ + + + + ++ A + Sbjct: 73 EYSMPLAFAPV-GLLGMQHADGEIHA--AKAAEEFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + D + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHADCSALVLTADLQMLGNRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ-------------------------PNGNTNFADL-------------SSKIALLSSA 181 I FA L + + Sbjct: 189 INLSTKTYWCLNMLKTKNRTFGNIANHAENKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+++K + + + D + +G ++ GG S + +I Sbjct: 249 WNGPMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISMLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA G + P + Sbjct: 299 ----------VDAVDPKLEVLIDSGIRSGQDLLKAKALGAKAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFHQEMDKTMAFCGFTDIN 373 >gi|309379663|emb|CBX21652.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 390 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 115/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTQRRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKDVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V +E L KE VSM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRTLEILYKEMDVSMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|224585495|ref|YP_002639294.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|259491771|sp|C0Q1T7|LLDD_SALPC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|224470023|gb|ACN47853.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 396 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGL---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|167549060|ref|ZP_02342819.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168241871|ref|ZP_02666803.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447309|ref|YP_002047724.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|238910271|ref|ZP_04654108.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|259491768|sp|B4T986|LLDD_SALHS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|194405613|gb|ACF65832.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205325623|gb|EDZ13462.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338956|gb|EDZ25720.1| L-lactate dehydrogenase (cytochrome) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 396 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|323454436|gb|EGB10306.1| hypothetical protein AURANDRAFT_22728 [Aureococcus anophagefferens] Length = 430 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 28/256 (10%) Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF---GV 134 +LA +A+ +A+ V + + + F + ++ + A +D Sbjct: 172 DLAASADFDHLALTVDLTWFGNRERDKRQGFTIPPSYSARQILDGVMAPAWTWDLLSSDP 231 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + A+ L +N Q + + + L + L + LK V Sbjct: 232 YTYANIDEDVPAEALAAFVNA-QLACDFDWD-DAKWLVGEWKRLRP--GGTIALKGV--- 284 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + D G ++ GG + D+ ++ A Sbjct: 285 VRPDDALRARDLGFDCVWVSNHGGRQLDTAPAPLDVLP---------------AIREA-- 327 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFI 313 + I GG++ G DI K++ LGAS G+ PFL A V + L E Sbjct: 328 VGCDFDLILDGGVQRGTDIAKALALGASAVGVGKPFLYGLGAGGKAGVDKCFDVLDAELR 387 Query: 314 VSMFLLGTKRVQELYL 329 M LLG + V EL Sbjct: 388 TCMGLLGVRTVAELRE 403 >gi|222106488|ref|YP_002547279.1| L-lactate dehydrogenase [Agrobacterium vitis S4] gi|259494965|sp|B9K115|LLDD_AGRVS RecName: Full=L-lactate dehydrogenase [cytochrome] gi|221737667|gb|ACM38563.1| L-lactate dehydrogenase [Agrobacterium vitis S4] Length = 379 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 120/379 (31%), Gaps = 84/379 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L S VD S ++L+ P++++ + TG + Sbjct: 29 AYSEHTMRRNIDDLADLALRQRVLK--SVGTVDISTTLFDEELAMPVVLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGA 125 E A AAEK + + + + V + S F+L + A Sbjct: 87 RGEV---QAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMK---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ + G++K V + A N +Q ++ P Sbjct: 141 LERAWAAGIRKLVFTVDMPVPGARYRDAHSGMSGPNASLRRIIQAVMHPTWAIDVGLLGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 ++ + + P+++K + L Sbjct: 201 PHDLGNVSAYRQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + ++ G ++ GG + S I + Sbjct: 258 DAKDAVRFGADGIIVSNHGGRQLDGVLSSARALPAIAA-----------------AVKGD 300 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 +A G+R+G+D+++ I GA + F+ A V ++ KE V+M Sbjct: 301 LTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMT 360 Query: 318 LLGTKRVQELYLNTALIRH 336 L G + + E+ +L+R Sbjct: 361 LTGARSIAEI-SPDSLVRG 378 >gi|86356082|ref|YP_467974.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] gi|86280184|gb|ABC89247.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CFN 42] Length = 382 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 71/384 (18%), Positives = 123/384 (32%), Gaps = 84/384 (21%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT- 65 D+I+ D RN F+ L+ L EVD SV +G+KL+ P+ S Sbjct: 26 DYIDGAADDEVTYRRNTAAFEACDLVPNVLRG--VAEVDMSVTVMGQKLAMPVYCSPTAL 83 Query: 66 ----------------------------GG-NNKMIERI-----------------NRNL 79 G + + +I N + Sbjct: 84 QRLFHHQGERAVAAAAAKHGTMFGVSSLGTISLEEARQISAGPQVYQFYFHKDRGLNHEM 143 Query: 80 AIAAEKTKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A+ V AM V S + + F + ++ D+ + Sbjct: 144 MARAKNAGVQAMMLTVDSITGGNRERDKRTGFAIPFKLNLAGMMQFAIKPSWAIDWMTHE 203 Query: 137 AHQAVHV---LGADGLFLHLN-PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 A + + + DG L ++ E++ P + +A + A LK + Sbjct: 204 AFRLPQLENHVKMDGGALSISRYFTEMLDP------SMSWDDVAEMVQAWGGQFCLKGI- 256 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 +S D + ++ G ++ GG S D ++I Sbjct: 257 --MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQLAEI-----------------V 297 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKE 311 + + GG++ G +LK++ LGA GL +L P A V A+E++R E Sbjct: 298 DAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALENIRTE 357 Query: 312 FIVSMFLLGTKRVQELYLNTALIR 335 M L+G V +L R Sbjct: 358 IERDMKLMGCTSVDQLTRRNLRFR 381 >gi|254875957|ref|ZP_05248667.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841978|gb|EET20392.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 388 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 123/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RKI H ++ + ++ N+K FD + + L +I + LG+ Sbjct: 21 RKIYHRRVPKMFVDYCESGSWQQNTLEHNQKDFDKYFFRQKVLTDIQHR--SLKTKILGQ 78 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + S PL + + G G I+ A AAE+ + + + + ++ A + Sbjct: 79 EYSMPLAFAPV-GLLGMQHADGEIHA--AKAAEEFGIPFTLSTMSICSTEEVAKHTTKPF 135 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + D + +LG +GL + P L+ + Sbjct: 136 WFQL-YMMKDRKFMANLIASAKHADCSALVLTADLQMLGNRHADIKNGLTVPPKPTLKNL 194 Query: 160 IQ-------------------------PNGNTNFADL-------------SSKIALLSSA 181 I FA L + + Sbjct: 195 INLSTKTYWCLNMLKTKNRTFGNIANHAENKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 254 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+++K + + + D + +G ++ GG S + +I Sbjct: 255 WNGPMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISMLEEI------- 304 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA G + P + Sbjct: 305 ----------VDAVDPKLEVLIDSGIRSGQDLLKAKALGAKAGLIGRPMVYGLGAYGEQG 354 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 355 AYRVLEIFHQEMDKTMAFCGFTDIN 379 >gi|15677240|ref|NP_274393.1| L-lactate dehydrogenase [Neisseria meningitidis MC58] gi|121635083|ref|YP_975328.1| L-lactate dehydrogenase [Neisseria meningitidis FAM18] gi|1381737|gb|AAB09666.1| lactate dehydrogenase [Neisseria meningitidis] gi|7413460|gb|AAF62327.1| L-lactate dehydrogenase [Neisseria meningitidis MC58] gi|120866789|emb|CAM10542.1| L-lactate dehydrogenase [Neisseria meningitidis FAM18] gi|261392350|emb|CAX49886.1| L-lactate dehydrogenase (cytochrome) [Neisseria meningitidis 8013] gi|316984195|gb|EFV63173.1| L-lactate dehydrogenase [cytochrome] [Neisseria meningitidis H44/76] gi|325132430|gb|EGC55123.1| L-lactate dehydrogenase [Neisseria meningitidis M6190] gi|325134387|gb|EGC57032.1| L-lactate dehydrogenase [Neisseria meningitidis M13399] gi|325138419|gb|EGC60987.1| L-lactate dehydrogenase [Neisseria meningitidis ES14902] gi|325140405|gb|EGC62926.1| L-lactate dehydrogenase [Neisseria meningitidis CU385] gi|325205857|gb|ADZ01310.1| L-lactate dehydrogenase [Neisseria meningitidis M04-240196] Length = 390 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|302405511|ref|XP_003000592.1| hydroxyacid oxidase [Verticillium albo-atrum VaMs.102] gi|261360549|gb|EEY22977.1| hydroxyacid oxidase [Verticillium albo-atrum VaMs.102] Length = 382 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 93/291 (31%), Gaps = 35/291 (12%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 LG S P IS G N E NL A + + + + Sbjct: 104 LPTTILGYNFSTPFFISPCARGINGHPEA-ELNLVKGAAAGNIMYMPSAFSSKSAAEISA 162 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + + L +NL A + G + L ++ + Sbjct: 163 AKAKDQVLFQQLYLTANLTADTATL--------RRYEAAGVNVFVLTIDSSAGSNRQRAA 214 Query: 166 TNFADLSSKI---------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 ++ L +P+ +K V S +K + ++ Sbjct: 215 RFGVGSANTQLTKLTWDYYEQLKKVTKLPIAVKGVT---SVETARQAIKHKVPAILVSNH 271 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S+ S ++ ++ A + + A GG+R G DILK Sbjct: 272 GGRSFDGSPSSLEILLELNQK--------------APEVFKKTEVWADGGVRYGGDILKL 317 Query: 277 IILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ P++ + ++ V E LR+E IV LG ++++ Sbjct: 318 LALGAKAVGVGRPYMFANIYGTEGVEKVTELLRRELIVDAGNLGLPSLKDI 368 >gi|83944054|ref|ZP_00956511.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. EE-36] gi|83845301|gb|EAP83181.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. EE-36] Length = 375 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 21/166 (12%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 +G FA + + L + VP+++K L + D + +G+ ++ GG Sbjct: 212 DGMMVFAPTWADLTRLIADSPVPVIIKGC---LRATDARRFVDAGVAGIIVSNHGGRVLD 268 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + P + + + GG+R G D+ K++ LGA Sbjct: 269 TVPA-----------------PVTQLAAVVQAVGQDVPVYLDGGIRRGSDVFKALALGAE 311 Query: 283 LGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P + + D + + LR E V+M L G V+++ Sbjct: 312 AVLVGRPVMHGLIVDGARGASQVLRRLRDELEVTMALCGCATVEDI 357 >gi|325142570|gb|EGC64966.1| L-lactate dehydrogenase [Neisseria meningitidis 961-5945] gi|325143451|gb|EGC65777.1| L-lactate dehydrogenase [Neisseria meningitidis M01-240013] gi|325198521|gb|ADY93977.1| L-lactate dehydrogenase [Neisseria meningitidis G2136] gi|325200004|gb|ADY95459.1| L-lactate dehydrogenase [Neisseria meningitidis H44/76] gi|325201914|gb|ADY97368.1| L-lactate dehydrogenase [Neisseria meningitidis M01-240149] gi|325204370|gb|ADY99823.1| L-lactate dehydrogenase [Neisseria meningitidis M01-240355] Length = 386 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 33 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 91 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 147 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 148 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 205 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 206 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 263 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 306 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 365 Query: 322 KRVQE 326 + +Q+ Sbjct: 366 RDIQD 370 >gi|33597475|ref|NP_885118.1| putative L-lactate dehydrogenase [Bordetella parapertussis 12822] gi|33573903|emb|CAE38218.1| putative L-lactate dehydrogenase [Bordetella parapertussis] Length = 402 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 118/363 (32%), Gaps = 76/363 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N++ F ++ + R L + E G++ + P ++ M G + Sbjct: 52 AEDNQALDDNRRAFAEYGFLPRVL--VDVSARHTRTELFGQEWAAPFGVAPM-GISALSA 108 Query: 73 ERINRNLAIAAEKTKV-AMAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA + A+ GS + + A ++ + + Sbjct: 109 YRGDIVLARAARAAGIPAIMSGSSLIPLEEVARQAPGTWFQAYLPGDPARIDALVERVAR 168 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + L H Sbjct: 169 AGYRTLVLTVDIPVSANRENNVRTGFSTPLKPGLRLAWDGLSRPRWLTGTFLRTLLAHGM 228 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ S + + + L++K + + D Sbjct: 229 PHFENSFATRGAPILSANVLRDFSARDHLDWSHVQRIRRSWRGELVIKGI---MHPRDAA 285 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L G ++ GG + + DI Sbjct: 286 LARAHGADGIIVSNHGGRQLDGACAPLRVLPDIAE------------------AAGAMAV 327 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + G+R G D+LK++ LGA L PF A +A V AI LR+E +M +LG Sbjct: 328 MMDSGIRRGGDVLKALALGARFVFLGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLG 387 Query: 321 TKR 323 R Sbjct: 388 VTR 390 >gi|116620898|ref|YP_823054.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116224060|gb|ABJ82769.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Solibacter usitatus Ellin6076] Length = 399 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 110/349 (31%), Gaps = 60/349 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D + N++ F L R L +D + G + P+ +G K ++ Sbjct: 70 DDATLRANREGFQHVQLRPRRL--CDATHLDMRTDLFGTVYASPIFTCPTSG--EKFLDP 125 Query: 75 INR-NLAIAAEKTKVAMAVG-SQRVMFSDHNAIKSFEL------------------RQYA 114 +A A + + S + N+ + R A Sbjct: 126 AGELAVARATKAHGAMQMLSNSTSTALEEVNSAHGRPVWFQLYAPSAWQACEKIIRRVEA 185 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH---LNPLQEII-QPNG------ 164 +I+ V + +A+ L H L P E +G Sbjct: 186 AGCPVIA--LTVDSTTGRNSETYLRALPKNLQPCLSCHAAGLGPSVEGRKMYDGIDMKGV 243 Query: 165 -NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 N A + L A + LLLK V + D L ++ GI ++ GG + Sbjct: 244 ALRNPAMTWEFVDRLRKATSLKLLLKGVD---TREDARLAVEHGIDGILVSNHGGRA--- 297 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + G T +L E+ GG+R G D+ K++ LGA Sbjct: 298 ---------------TETGRSTIEALPEVVTEVGGRIPVFLDGGVRRGTDVFKALALGAK 342 Query: 283 LGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 G+ P+L V +E ++ E ++M GT V + + Sbjct: 343 AVGIGRPYLWGLGAFGQAGVERVLEIVQGELKLAMGNCGTPTVAAIDRS 391 >gi|2501812|gb|AAB80700.1| glycolate oxidase [Arabidopsis thaliana] Length = 259 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 25/180 (13%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + I L + ++P+L+K V L+ D + +++G ++ G Sbjct: 94 YVAGQIDRTLSW--KDIQWLQTITNMPILVKGV---LTGEDARIAIQAGAAGIIVSNHGA 148 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSI 277 + + T +LE + GG+R G D+ K++ Sbjct: 149 RQLDYVPA------------------TISALEEVVKATQGGVPVFLDGGVRRGTDVFKAL 190 Query: 278 ILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LG S + P + A + V ++ LR EF ++M L G + + E+ N + Sbjct: 191 ALGTSGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSISEITRNHIVTEW 250 >gi|326493606|dbj|BAJ85264.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 172 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 23/163 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +P+LLK + +++ D +++G ++ G + Sbjct: 20 WKDVEWLKSITGLPILLKGI---VTAEDARKAVEAGAAGIIVSNHGARQLDYAPA----- 71 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T +LE + + GG+R G D+LK++ LGA + P Sbjct: 72 -------------TISALEEVVKAVGGAVPVLVDGGVRRGTDVLKALALGARAVMVGRPV 118 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L A IE L +E ++M L G + V E+ + Sbjct: 119 LYGLAARGEAGAKHVIEMLNRELELAMALCGCRSVAEITRDRV 161 >gi|322832877|ref|YP_004212904.1| (S)-mandelate dehydrogenase [Rahnella sp. Y9602] gi|321168078|gb|ADW73777.1| (S)-mandelate dehydrogenase [Rahnella sp. Y9602] Length = 383 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 126/377 (33%), Gaps = 78/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F W I L + D SV G++LS PLLI+ TG N + Sbjct: 31 ADDEQTLQDNREVFGRWRFIPPVL--NDSSQRDLSVTVCGQRLSAPLLIAP-TGYNGMLR 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLG 124 + LA A++ +A + + A ++ + L+ T L+ Sbjct: 88 FGADTMLARTAKRAGIAYIQSTVSTASLEEIAAQNLPQHWFQLYVLKDRTVTTSLLERAR 147 Query: 125 AVQL--------NYDFGVQKAHQA-------VHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 A FG ++ + + VL + LH + ++P G F Sbjct: 148 AAGCTTLVVSVDAVHFGNREKDKRNYRRPMKLSVLSMIDVALHPGWVWRTLKPAGMPGFG 207 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L + + S LL+K + L+ D +L Sbjct: 208 NLKPYVPADKQRGAGGASYFSAQMDTRLNWETLRWIRSQWQGALLIKGI---LAPEDAQL 264 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQF 261 SG ++ GG + L R C +A Sbjct: 265 AFASGADGIVLSNHGGRQLDGS------------------VSALEVLPEIRKLCGSQATI 306 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D++K++ LGA L P L A A+E + +E +M LG Sbjct: 307 LIDSGFRRGTDVVKALALGADAVLLGRPMLYGVAAAGEAGAQRALEIILQEVDRTMAQLG 366 Query: 321 TKRVQELYLNTALIRHQ 337 V++L L+R Q Sbjct: 367 CTSVRQL--GPHLLRQQ 381 >gi|313619030|gb|EFR90851.1| isopentenyl-diphosphate delta-isomerase [Listeria innocua FSL S4-378] Length = 136 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 3/118 (2%) Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILG 280 ++IE+ R + + DWGI T +L M + ++ASGG+RN +DI+K++ LG Sbjct: 1 AQIENDRRRDQAYNFLL-DWGISTGQALIDMQHADAPKIAYLASGGIRNPLDIVKALALG 59 Query: 281 ASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A G+A + D + +E +++ L K + EL ++ + Sbjct: 60 ADSVGMAGQIIYSLKKDGVSKTIEKLELWKEQLRGLFVLANAKNIAELKETPLIVSGE 117 >gi|195382217|ref|XP_002049827.1| GJ21802 [Drosophila virilis] gi|194144624|gb|EDW61020.1| GJ21802 [Drosophila virilis] Length = 364 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 108/324 (33%), Gaps = 61/324 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRV 97 ++D G++L +PL I+ + + + + A AA K + + Sbjct: 54 DVSQLDLGCMIFGQQLKWPLGIAPTA---MQKMAHPDGEIGNARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 D + K F+L Y ++ +N A+ L D V H+ V Sbjct: 111 TSLEDLSAGAPDTCKWFQLYIYKDRSLTEKLVRRAERANFKALVLTVDAPV-FGHRRSDV 169 Query: 144 LGADGLFLHLNPL------------------QEIIQPNGNTNFADLSSKIALLSSAMDVP 185 L HL+ E + + + I L +P Sbjct: 170 RNKFSLPQHLSLANFRGEQANGVVTMGGSGINEYVASQFDASITW--EDINWLKQLTHLP 227 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++ K V L++ D L + G ++ G + + + ++ Sbjct: 228 IIAKGV---LTAEDAVLAREFGCAGVIVSNHGARQIDTVPASIEALPEV----------- 273 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAA 304 + N+ + GG+ G DI K++ LGA + P + A + V Sbjct: 274 ------VKAVGNDLVVMLDGGIMQGNDIFKALALGAKTVFIGRPAVYGLAYNGQRGVEQL 327 Query: 305 IESLRKEFIVSMFLLGTKRVQELY 328 + LR +F ++M L G + + ++ Sbjct: 328 LTVLRNDFEITMKLTGCQSLGDIQ 351 >gi|118486419|gb|ABK95049.1| unknown [Populus trichocarpa] Length = 267 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 25/177 (14%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + L + +P+L+K V L++ D L +++G ++ G Sbjct: 100 YVAGQIDRTLSW--KDVEWLQTITRLPILVKGV---LTAEDARLSVQAGAAGIIVSNHGA 154 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSI 277 + T ++LE + GG+R G D+ K++ Sbjct: 155 RQLDYVP------------------STIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKAL 196 Query: 278 ILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGAS + P + A + V ++ LR+EF ++M L G + ++E+ + + Sbjct: 197 ALGASGIFIGRPVVFSLASEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIV 253 >gi|326333022|ref|ZP_08199277.1| L-lactate dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325949185|gb|EGD41270.1| L-lactate dehydrogenase [Nocardioidaceae bacterium Broad-1] Length = 415 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 112/358 (31%), Gaps = 69/358 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN++ FD L A ++ EV LG+ + P++++ TG Sbjct: 71 EHAMRRNREAFDRVELRPTAFGQVGEPEV--RTTILGRPAAAPIVLAP-TGYTRLSHHAG 127 Query: 76 NRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTVLI--------- 120 R +A AA + + + V + F++ +V + Sbjct: 128 ERAVAAAAAAAGLPYTLSTYATTSITDVARAAPQGRNWFQVYLMKDRSVTLEHLSEAAAQ 187 Query: 121 -------------------SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 L + ++ G L PL+ Sbjct: 188 GYEALMLTIDTTVTGMKSKDKLNGFAIPPQLSLRTFAGMARHPGWVANILTTEPLRFATF 247 Query: 162 PNGNTNFADLSSK-----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G+ S I L D P+++K V LS D +++G Sbjct: 248 PEGSHYGRWGMSNELREQAIRPSDIGWLKEYWDGPVVVKGV---LSVADAVACVEAGADA 304 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG R +L + + + G+R+G Sbjct: 305 LVLSNHGGRQLDRAPVPLELLPAV-----------------VDAVGDRTEVYVDSGVRSG 347 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 DI ++ LGA + P+L M V AA+ L +E +M LLGT + + Sbjct: 348 GDIAAALGLGARGVLIGRPYLYGLMVGGRQGVDAALTLLVEELRRAMCLLGTPDIAAI 405 >gi|302922632|ref|XP_003053507.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256734448|gb|EEU47794.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 488 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 101/319 (31%), Gaps = 62/319 (19%) Query: 45 DPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNLAIAAEKTKV-------AMAVGSQ 95 D + +G K+ P+ ++ +M + E + +A A + A Q Sbjct: 164 DLTTTLIGNKVGLPVFVAPAAMARLAHPDGE---QGIAKACSRFGAMQIVSNNASMTPEQ 220 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ----------LNYDFGVQKAHQAVHVLG 145 + + ++L + L ++ L D V + Sbjct: 221 VIEGAKPGQTFGWQLYVQNQRQKSEAMLKRIEAMRDYYKFVCLTLDAPVPGKRELDEKAN 280 Query: 146 ADGLFLHLNPLQEIIQPN----GNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGL 195 D P +P G F + + L+ D+P++LK + Sbjct: 281 FDYSEPS--PASGESKPGAGGVGQQLFFGTAADLTWKTTLPWLAEHTDLPIVLKGLQ--- 335 Query: 196 SSMDIELGLKSGIR--YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 + D L + + ++ GG + P L + Sbjct: 336 THEDAYLAAQYAPQVKAIILSNHGGRAADTAP------------------PAIHVLLEIQ 377 Query: 254 PYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESL 308 YC E + GG++ G D++K++ LGAS G+ L A V +E L Sbjct: 378 KYCPEVFSKIEVWVDGGIKRGTDVVKALCLGASAVGIGRGALFGLGAGGQAGVERVLEIL 437 Query: 309 RKEFIVSMFLLGTKRVQEL 327 E M LLG K + EL Sbjct: 438 EAETATCMRLLGAKNISEL 456 >gi|91788909|ref|YP_549861.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas sp. JS666] gi|91698134|gb|ABE44963.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas sp. JS666] Length = 379 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 115/354 (32%), Gaps = 71/354 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ +D+ L+ R L ++ +E +G+ L+ PLL++ + +M Sbjct: 45 AGDELTLRANRTAWDNLTLLPRVLRPMAGGH--TKIELMGRTLAHPLLLAPVA--YQRMA 100 Query: 73 ER---INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 I A A++ + + S + ++F YA L L Q + Sbjct: 101 HPDGEIATAHAAASQGAGLVL---STQASVPLETVAEAFG--AYAERGPLWFQL-YFQHD 154 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFA------------------- 169 F + +A G + L L ++ P F Sbjct: 155 RGFTRELVQRA-EHAGYEALVLTVDAPTSGARDRERRVAFKLPAGISAVNLARLSPQPSN 213 Query: 170 ----------DLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 L + + L S +P++LK V L D + + Sbjct: 214 PGPGYNALFDGLLAHAPTWADVEWLQSTTRLPVVLKGV---LHPEDARQAAALRLAALIV 270 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + + + I + + GG+R G D+ Sbjct: 271 SNHGGRTLDTAPATATILPRIAEALAG-----------------DLPLLVDGGIRRGTDV 313 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK+I LGA + P++ A + V + LR E ++M L G + + Sbjct: 314 LKAIALGARAVLVGRPYVYGLANAGALGVAHVLRLLRDELEIAMALCGCATLDQ 367 >gi|299134515|ref|ZP_07027708.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Afipia sp. 1NLS2] gi|298591262|gb|EFI51464.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Afipia sp. 1NLS2] Length = 382 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 73/368 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N ++ R L + ++ E G++L+ P+ I+ + G R Sbjct: 32 EQTLRSNIDDLQRVNIKQRIL--RNVGDLSLKTELFGQQLAMPVAIAPI-GLMGMCARRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS---N 122 A AA+ + + + V + +S F+L R++ + + + Sbjct: 89 EVQTAKAAQAKGIPFTMSTVSVCSIEEVQSQSRQPIWFQLYVLKDRKFMKNALERAWAAG 148 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPN------------------ 163 + + D + G G + + LQ + +P Sbjct: 149 IRTLVFTVDMPTPGSRYRDPHSGMSGPYRYPKRILQAMFKPGWAMDVGIMGRPHDLGNIS 208 Query: 164 -------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 G ++ + + + +++K + L D + Sbjct: 209 AYTGKVVGLEDYIGWLANNFDPTIGWSDLEWIREFWKGTIIIKGI---LDPQDARDAVSF 265 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S I N+ +A G Sbjct: 266 GANGIVVSNHGGRQLDGAASSARALPAIADT-----------------VGNDLTILADSG 308 Query: 267 LRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G+DI++ + LGA L + A V ++ L KE V+M L+G +Q Sbjct: 309 IRSGLDIVRMLALGAKSVLLGRATIYALATAGQSGVENLLDMLAKEMRVAMTLMGVNSIQ 368 Query: 326 ELYLNTAL 333 E+ + Sbjct: 369 EINRDNIF 376 >gi|219884085|gb|ACL52417.1| unknown [Zea mays] Length = 305 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 102/316 (32%), Gaps = 53/316 (16%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT--KVAMAVGSQRVMFSDHN- 103 S LG + P++++ G +K+ A + M S + Sbjct: 2 STSLLGYNMPSPIIVAPT--GAHKLANPEGEVATARAAAACNTIMMLSFSSSCRIEEVAS 59 Query: 104 --------AIKSFELRQYAPHTVLISN---LGAVQLNYDFGV---QKAHQAVHVLGADGL 149 + ++ R + V + A+ L D V ++A ++ Sbjct: 60 SCDAIRFYQLYVYKRRDVSATLVRRAESLGFRAIVLTVDTPVLGRREADIRNKMIAPPLS 119 Query: 150 FL----HLNPLQEIIQPNGNTNFAD-------LSSKIALLSSAMDVPLLLKEVGCGLSSM 198 L L+ + + F+ + L S +P+LLK + +++ Sbjct: 120 NLEGLMSLDDFDDAEGGSKLERFSRETLDPSLSWKDVEWLKSITSLPILLKGI---VTAE 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCN 257 D +++G ++ G + T +LE + Sbjct: 177 DARKAVEAGAAGLIVSNHGARQLDYAPA------------------TISALEEVVKAVAG 218 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSM 316 + GG+R G D+LK++ LGA + P F A IE L KE ++M Sbjct: 219 AVPVLVDGGVRRGTDVLKALALGAKAVMVGRPVFFGLAARGEAGARHVIEMLNKELELAM 278 Query: 317 FLLGTKRVQELYLNTA 332 L G + V E+ Sbjct: 279 ALCGCRSVAEVTRAHV 294 >gi|195483598|ref|XP_002090352.1| GE12845 [Drosophila yakuba] gi|194176453|gb|EDW90064.1| GE12845 [Drosophila yakuba] Length = 366 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 117/334 (35%), Gaps = 63/334 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLI--SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV 97 +D S + G+++ +PL I ++M + E N A AA K + + Sbjct: 54 DVSRLDISCKIFGEQMKWPLGIAPTAMQKMAHPEGEVGN---ARAAGKAGSIFILSTLST 110 Query: 98 M-FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA--- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 111 TSLEDLANGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVR 170 Query: 141 ----------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 V G + + + + + IA L S + Sbjct: 171 NNFSLPSHLTLANFQGVKATGVGNAAMGASGINAYVSSQFDPTITW--KDIAWLKSITHL 228 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K V L++ D L + G ++ G + + + +I Sbjct: 229 PIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI---------- 275 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVA 303 + + GG+ G DI K++ LGA + P A + V Sbjct: 276 -------VKAVGENLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEE 328 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F ++M L+G + + ++ +A++ H+ Sbjct: 329 MLSVLRKDFEITMALIGCQTLGDI--TSAMVVHE 360 >gi|148557147|ref|YP_001264729.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] gi|148502337|gb|ABQ70591.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] Length = 348 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 122/346 (35%), Gaps = 50/346 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ + W L R L ++ D +V+ G +S PLLI+ G + ++ Sbjct: 30 AGEGKAVARNRAAWGRWALRQRVLRDVGTC--DTAVDLFGVPVSMPLLIAPS--GLHGLV 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 + A + + V S F+L A L + Sbjct: 86 HPDAESATARAAQAADTLMVLSMNSTLPVEEVAPHCDKFWFQLYWGADRGFLRELMARAA 145 Query: 128 --------LNYDFGVQ--------KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 L D V+ +A AV + F LQ+ + + Sbjct: 146 GAGAKAFCLTLDMPVRPWLLGPMRRALAAVGDVRPAHGFPRSGHLQD--DARWDHDARLT 203 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + ++ L + +P++LK + +++ D L ++ G ++ GG Sbjct: 204 WADLSWLRANSPLPIVLKGI---MTAEDAALAVEHGADAIIVSNHGGRVLDE-------- 252 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+ T +L + GG+R+G DI K++ LGA + P Sbjct: 253 ----------GLATAEALPAIVAAVAGRIDVHVDGGIRSGADIAKALALGARTALIGRPA 302 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L A D + + A ++ LR E M ++G V + ++ + R Sbjct: 303 LWGIAADGDEGLAAMLDLLRGELRSVMGMIGAGSVAAIDRSSIVER 348 >gi|241205841|ref|YP_002976937.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859731|gb|ACS57398.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 380 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 119/375 (31%), Gaps = 75/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R + + + +G+K+S P+ ++ TG Sbjct: 30 AWTESTYAANESDFSQIKLRQRVM--VDMTNRTLATTMIGQKVSMPVALAP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL---- 123 A AAE+ V + + + + A + F+L +++ + Sbjct: 87 ADGEMLAARAAEEFGVPFTLSTMSICSIEDVASATTRPFWFQLYVMRDKDFVVNLINRAK 146 Query: 124 --GAVQLNYDFGVQKAHQAVHVLG------ADGLFLHL-------------------NPL 156 G L +Q Q L H+ N Sbjct: 147 AAGCSALVLTADLQILGQRHKDLRNGLSAPPKFTPKHVWQMATRPFWCLDMLQTKRRNFG 206 Query: 157 QEIIQPNGNTNFADLSSKIAL-------------LSSAMDVPLLLKEVGCGLSSMDIELG 203 + TN A LS+ + PL++K + L D + Sbjct: 207 NIVGHAKNVTNIASLSAWTHEQFDPRLSWADVAWIKEQWGGPLIIKGI---LDPEDAKAA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G ++ GG S + I + + Sbjct: 264 ADTGADAIVVSNHGGRQLDGAPSSISMLPKI-----------------VDAVGDRIEIHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + PFL + V A+ +RKE ++M L G + Sbjct: 307 DGGIRSGQDVLKAVALGAKGTYIGRPFLYGLGAMGKEGVSLALGIIRKEMDITMALCGKR 366 Query: 323 RVQELYLNTALIRHQ 337 + + +N+++I + Sbjct: 367 DIND--VNSSIIDGR 379 >gi|158423891|ref|YP_001525183.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158330780|dbj|BAF88265.1| L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 382 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 107/360 (29%), Gaps = 71/360 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + + N D L R + + + + + FLG+ ++ P+ I+ TG + Sbjct: 32 DERTLAANYAELDALRLRQRVM--VDVSKRNVATTFLGQDVTIPVGIAPTGLTGLFHADG 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQYAPHTVLISNL- 123 E + A AA+ V + + + + + +R A L+ Sbjct: 90 EILG---ARAAQAFGVPFTLSTMSICSIEDVAGAVDKPFWFQLYVMRDRAFTQSLVERAR 146 Query: 124 --GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNT---- 166 G L + Q + A+ L + P + G Sbjct: 147 AAGCPVLVLTLDLAAHGQRHRDIKNGLSVPPRLTLANALDIATKPGWALNVLRGQRRSFG 206 Query: 167 NFADLSSK-------IALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 N ++ D L K+V L D + Sbjct: 207 NLQGWMPAGKNLNAMAQWVAQQFDPSLSWKDVAWIRSLWPGKLVLKGILDPEDARIAADH 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG + + +I + + + GG Sbjct: 267 GADAIVVSNHGGRQLDSAPASISVLPEIAS-----------------AVGSRTEILLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + +L A V +E LRKE SM L G V+ Sbjct: 310 IRTGQDVLKALALGARGCLIGRSWLYGLAAGGQGGVTQVLEILRKELDTSMALAGLTDVR 369 >gi|169778897|ref|XP_001823913.1| hypothetical protein AOR_1_278094 [Aspergillus oryzae RIB40] gi|238499483|ref|XP_002380976.1| FMN dependent dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|83772652|dbj|BAE62780.1| unnamed protein product [Aspergillus oryzae] gi|220692729|gb|EED49075.1| FMN dependent dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 403 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 126/356 (35%), Gaps = 65/356 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N+ F W +I R L + D D SVE G+K P+L++ + G + Sbjct: 52 AGEKATMDSNRLAFRQWKIIPRMLRQ--VDNQDLSVELFGQKYPNPVLMAPV-GVQSLFH 108 Query: 73 ERINRNLAIAAEKTKVA--MAVGSQRVMFS----DHNAIKSFEL-------------RQY 113 E LA + + V ++ S + + + + F+L ++ Sbjct: 109 EDKETGLAESCAEVGVPYTLSTASTSSIEEVAETNGDGKRWFQLYWPQDDDVTLSLLKRA 168 Query: 114 APHTVLI--------------SNLGAVQLNYDFGV-QKAHQAVHVLGADGLFLHLNPLQE 158 + + ++L + + GV + + V A + L+E Sbjct: 169 KDNGFSVLVVTLDTWSLAWRPADLDNAYVPFIKGVGNQIGFSDPVFRAKFEKESGSKLEE 228 Query: 159 IIQPNGNTNFADL-------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I +D+ IA L D P++LK + D EL L++G Sbjct: 229 DIVGASRAWISDVFPGRPHTWEHIAFLRKNWDGPIVLKGIQH---VEDAELALQAGCDGI 285 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG D+ +I ++ + G+R G Sbjct: 286 VVSNHGGRQVDGAIGSLDVLPEI-----------------VEAVGDKMTVLFDSGVRTGA 328 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D++K++ LGA + P + A++ + + ++ L + +M L G V E Sbjct: 329 DVVKALCLGAKAVFVGRPVIYGLAINGREGAKSVMKGLLADLWQTMSLSGICTVAE 384 >gi|254822975|ref|ZP_05227976.1| lactate 2-monooxygenase [Mycobacterium intracellulare ATCC 13950] Length = 385 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 116/367 (31%), Gaps = 92/367 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N F W L R I+ +E D SVE G + P+ ++ + G G Sbjct: 49 AGDEHTQRANCAAFKRWGLYPRM--GIAPEERDMSVELFGMRFPSPIFMAPI-GVIGVCD 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV---- 126 + A A+ +T V VG+ P + + LG Sbjct: 106 PEGHGDMLCARASVRTGVPFFVGTLTSD----------------PMEDIAAELGDSPAFF 149 Query: 127 QLNYDFGVQKAHQAVHVLGA---DGLFLHLN-------------------PLQEIIQPNG 164 QL + A VH A + + L+ P + Sbjct: 150 QLYTPPDRKMAASLVHRAEAAGFKAIAVTLDTWVTGWRPRDLSGGNYPQVPSGCLANYTS 209 Query: 165 NTNFADLSSK-----------------------IALLSSAMDVPLLLKEVGCGLSSMDIE 201 + F S+ + L + D+PL++K V D+ Sbjct: 210 DPVFRSRLSRGEDATEAAVRKLPIFGGPFRWDDLEWLRAETDLPLMVKGVCH---PDDVR 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ + GG + G+P L + Sbjct: 267 RAKDIGVDGIYCSNHGGRQ------------------ANGGLPCLDCLPDVLEAADGLPV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R+G DI+K++ LGA+ G+ P+ A+ + VV + SL E + M + G Sbjct: 309 LFDSGVRSGADIIKALALGATAVGIGRPYAYGLALGGVEGVVHVLRSLLAEADLIMAVDG 368 Query: 321 TKRVQEL 327 +++L Sbjct: 369 YPSLKDL 375 >gi|119186239|ref|XP_001243726.1| hypothetical protein CIMG_03167 [Coccidioides immitis RS] Length = 398 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 104/319 (32%), Gaps = 58/319 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N F + + R L + + PS+E LG+K++FP+ I+ + I Sbjct: 100 DQITVRENSTAFLKYRIRPRVL--VDVSQCCPSIECLGRKVAFPVGIAP----TVQFIAH 153 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI----SNLGAVQL 128 + +A A + + MA+GS + + + + + + A +L Sbjct: 154 PDAEVATSRACARKGINMAIGSLASNTVKDICGAGKSVDSNMTYAMQMYPFKNRVMAAKL 213 Query: 129 NYDFGVQKAHQAVHVLGADGLFL---------HLNPLQ-----------------EIIQP 162 + Q + L + + Q + + Sbjct: 214 IKEAEAQGCKAVFLTADSPTLGVRYREWKDDFRIPSEQGFPNIGWTVERLRAQSNDSVGQ 273 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + + + IA S + + +K V L++ D + ++ G ++ GG Sbjct: 274 DTLDDSQNWARDIAWFKSQTKMEIWIKGV---LTAEDTQKAVEMGCHGIIVSNHGGRQLD 330 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + D + + + GG+R G DI K+I LGA Sbjct: 331 GVPATIDALPEC-----------------VKAASGRLKVHIDGGIRTGSDIFKAIALGAE 373 Query: 283 LGGLASPFLKPAMDSSDAV 301 L P L S A+ Sbjct: 374 CCWLGRPALWALAVSRLAL 392 >gi|327194716|gb|EGE61561.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 380 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 119/372 (31%), Gaps = 69/372 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R L + + +G+K+S P+ ++ TG Sbjct: 30 AWTESTYQANESDFRRIKLRQRVL--VDMSDRTLETTMIGQKVSMPVALAP-TGLTGMQY 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS----FELRQYAPHTVLISNLGAVQ 127 A AAE+ V + + + D ++ + F+L ++ + + Sbjct: 87 ADGEMLAARAAEEFGVPFTLSTMSICSIEDVASVTTRPFWFQLYVMRDKDFVLGLINRAK 146 Query: 128 LN----------------YDFGVQKAHQAVHVLGADGL-------FLHLNPLQEIIQPNG 164 ++ A L F L+ LQ + G Sbjct: 147 AAKCSALVLTADLQILGQRHKDLRNGLSAPPRFTPKHLWQMASRPFWCLDMLQTKRRTFG 206 Query: 165 N-----TNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 N N ++++S A D L +V L D + Sbjct: 207 NIIGHAKNVSNITSLAAWTHEQFDPRLSWADVAWIKAQWGGPLIIKGVLDPEDARAAADT 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + I + + GG Sbjct: 267 GADAIVVSNHGGRQLDGAPSSISMLPAI-----------------VDAVGDRMEIHLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ LGA + PFL + V A+ +RKE ++M L G + + Sbjct: 310 IRSGQDVLKAVALGAKGTYIGRPFLYGLGAMGKEGVTLALGIIRKEMDITMALCGKRDIN 369 Query: 326 ELYLNTALIRHQ 337 + +NT++I Q Sbjct: 370 D--VNTSIILPQ 379 >gi|315222278|ref|ZP_07864184.1| L-lactate oxidase [Streptococcus anginosus F0211] gi|315188611|gb|EFU22320.1| L-lactate oxidase [Streptococcus anginosus F0211] Length = 379 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 111/355 (31%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + +EF G KLS P++++ + Sbjct: 41 AEDTFTLRENIRAFNHKLIVPHTL--RNVENPSTEIEFDGDKLSSPIILAPVA------A 92 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A V ++ S F+ + Sbjct: 93 HKLANVQGEVASAKGVHEFGSLYTTSSYSTVDLPEISQALQGTPHWFQFYFSKDDGINRH 152 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P+G D Sbjct: 153 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PDGAGKTMDFVY 210 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++S D+P+ +K C D+E L +G + GG Sbjct: 211 KSAKQKLSPRDVEFIASYSDLPVYVKGPQC---REDVERSLDAGASGIWVTNHGGRQIDG 267 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 268 GPAAFDSLQEVAET-----------------VDKRVPIVFDSGVRRGQHVFKALASGADL 310 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 + P + A+ S V E + E M L GT+ ++E L N Sbjct: 311 VAIGRPVIYGLALGGSVGVRQVFEHINDELKTVMQLSGTQTIEEVKHFKLRHNPY 365 >gi|238023625|ref|YP_002907857.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] gi|237878290|gb|ACR30622.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] Length = 387 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 122/371 (32%), Gaps = 73/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L + L E+ +VD S G++L+ P+ + + TG + Sbjct: 29 AYAEDTLRRNSEDLRALALRQKVLKEVG--DVDLSTRIFGQQLALPVALGPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLI 120 E A AA V + + V + + F+L R + + + Sbjct: 87 RGEV---QAARAASAKGVPFTLSTVGVCSIEEVQSQVARPIWFQLYVLKDRGFMKNVLER 143 Query: 121 S---NLGAVQLNYDFGVQKAHQAVH---VLGADGLF-------LHLNPLQE---IIQPNG 164 + + + D V A + G H + + P+ Sbjct: 144 AWAVGIRTLVFTVDMPVPGARYRDKHSGMSGPHAAIRRYWQSVFHPHWATAVGLLGMPHD 203 Query: 165 NTNFADLSSK-------IALLSSAMDVPLLLKEVGCG-------------LSSMDIELGL 204 N + + + L + D + +++ L +D + Sbjct: 204 LGNVSAYLKRRSKLDDYVGWLGANFDPTIGWRDLQWIRDFWKGSMILKGILDPLDARDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 K G ++ GG + + T +L +A E + Sbjct: 264 KFGADGIVVSNHGGRQLDGV------------------LSTARALPTIADAVKKEITVLV 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTK 322 G+R+G+D+++ + LGA L ++ + + V ++ +R E V+M L G + Sbjct: 306 DSGVRSGLDVVRMLALGADTVLLGRAYIYALASAGERGVAHLLDLIRNEMRVAMTLTGAR 365 Query: 323 RVQELYLNTAL 333 + ++ + + Sbjct: 366 SIADISRSNLV 376 >gi|89093532|ref|ZP_01166480.1| putative L-lactate dehydrogenase (cytochrome) protein [Oceanospirillum sp. MED92] gi|89082222|gb|EAR61446.1| putative L-lactate dehydrogenase (cytochrome) protein [Oceanospirillum sp. MED92] Length = 384 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 111/362 (30%), Gaps = 73/362 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N+ F L R + + + +G+ +S P+ I+ TG Sbjct: 33 ESTYRANESDFQKIMLRQRV--AVDMTNRNLKTQLVGQNISMPVAIAP-TGLAGMQHADG 89 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL------G 124 A A E+ + + + + + A + F+L + S + G Sbjct: 90 EMLAAQACEEAGIPYTLSTMSICSIEDVAAATSQPFWFQLYVMKDRGFVNSLIDRAKAAG 149 Query: 125 AVQLNYDFGVQ-KAHQAVHVLGADGLFLHLNP---LQEIIQPN--------GNTNFADL- 171 L F +Q + + L P LQ +P +F ++ Sbjct: 150 CSALVLTFDLQILGQRHKDIRNQLSAPPRLTPKHLLQMATRPGWCLKMAGTKRHDFRNIV 209 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 I + PL+LK + L D + +S Sbjct: 210 GHAPGVTDLSSLGAWTAEQFDPKLSWEDIEWIKERWGGPLILKGI---LDPDDAAIAAQS 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S I ++ + GG Sbjct: 267 GADALIVSNHGGRQLDGARSSIQALPSI-----------------VDKVGDQIEIHLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ +GA + P+L V +E +R E ++M L G + V Sbjct: 310 IRSGQDVLKALCMGAKGVYIGRPYLYGLGALGKPGVSKVLEIIRNELDITMALCGERDVT 369 Query: 326 EL 327 +L Sbjct: 370 QL 371 >gi|313668523|ref|YP_004048807.1| L-lactate dehydrogenase [Neisseria lactamica ST-640] gi|313005985|emb|CBN87444.1| L-lactate dehydrogenase [Neisseria lactamica 020-06] Length = 390 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKDVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE VSM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|56415584|ref|YP_152659.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364511|ref|YP_002144148.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821571|sp|Q5PLQ7|LLDD_SALPA RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491772|sp|B5BHX7|LLDD_SALPK RecName: Full=L-lactate dehydrogenase [cytochrome] gi|56129841|gb|AAV79347.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095988|emb|CAR61575.1| putative L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 396 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 214 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 270 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 271 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 312 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 313 LDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLVEKEMKVAMTLTGAKSISEISG 372 Query: 330 NTAL 333 ++ + Sbjct: 373 DSLV 376 >gi|326493534|dbj|BAJ85228.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 192 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 23/163 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +P+LLK + +++ D +++G ++ G + Sbjct: 40 WKDVEWLKSITGLPILLKGI---VTAEDARKAVEAGAAGIIVSNHGARQLDYAPA----- 91 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T +LE + + GG+R G D+LK++ LGA + P Sbjct: 92 -------------TISALEEVVKAVGGAVPVLVDGGVRRGTDVLKALALGARAVMVGRPV 138 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 L A IE L +E ++M L G + V E+ + Sbjct: 139 LYGLAARGEAGAKHVIEMLNRELELAMALCGCRSVAEITRDRV 181 >gi|229821772|ref|YP_002883298.1| L-lactate dehydrogenase (cytochrome) [Beutenbergia cavernae DSM 12333] gi|229567685|gb|ACQ81536.1| L-lactate dehydrogenase (cytochrome) [Beutenbergia cavernae DSM 12333] Length = 403 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 106/360 (29%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R + F L ++ + LG + P + TG M Sbjct: 59 AEAEISLRRARAAFRSVEFQPSILH--DVSDLSTATPMLGVDSALPFAFAP-TGFTRMMQ 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFEL---RQYAPHTVLISNL 123 + + A + + A+ + V + A K F+L R + L++ Sbjct: 116 TQGESAVVRVAGRRGIPYALSTMGTTSIEDVAAASPEARKWFQLYVWRDRSAGEDLMARA 175 Query: 124 GAVQ-----LNYDFGVQKAH--------QAVHVLGADGLF------------LHLNPLQE 158 A L D V A L + L PLQ Sbjct: 176 RAAGYEALVLTVDVPVAGARLRDARNGFSIPPALTLKTIADGATHPSWWIDLLTTPPLQF 235 Query: 159 IIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + ADL + + S D PL++K + + D +G Sbjct: 236 ASLESWDGTIADLLDALFDPTMTMADLEWIRSQWDGPLVIKGIQ---TLDDARRVADAGA 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L D + + G+ Sbjct: 293 DAIILSNHGGRQLDRAPVPLRLVPDTRE-----------------AVGDRTEVWVDTGIL 335 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G D++ +I LGA + +L M + V A++ L E +M LLG + L Sbjct: 336 SGADVVAAIALGAHATLVGRAYLYGLMAGGERGVERAVDILEAEVRRTMKLLGVNDIASL 395 >gi|226329437|ref|ZP_03804955.1| hypothetical protein PROPEN_03342 [Proteus penneri ATCC 35198] gi|225202623|gb|EEG84977.1| hypothetical protein PROPEN_03342 [Proteus penneri ATCC 35198] Length = 286 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 21/159 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I + +P+++K + S D + +K+G ++ GG + D+ I Sbjct: 140 IQYVKKMSGLPVIVKGIE---SPEDADTAIKAGADAIWVSNHGGRQLDSAPATIDVLPAI 196 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 A+ + G+R G + K++ GA + + P L Sbjct: 197 -----------------AKVVNKRVPIVFDSGVRRGSHVFKALASGADVVAVGRPILYGL 239 Query: 295 -MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + ++ V + I+ L KE ++M L G K V+++ Sbjct: 240 NLGGAEGVNSVIQHLNKELKINMMLGGAKTVKDIQATHL 278 >gi|326472276|gb|EGD96285.1| mitochondrial cytochrome b2 [Trichophyton tonsurans CBS 112818] Length = 493 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 119/360 (33%), Gaps = 72/360 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL+ P++ S ++ +A Sbjct: 143 NNSIYRSILLRPRVF--VDCKNCSLATSMLGYKLNTPIIASPTA--MARLAHPSGEAGIA 198 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ + A++ Sbjct: 199 AACAKFGAMQIISNNASMTPEEIVKGAPPDQVFGWQLYVQIERKKSEAMLARINKIKAIK 258 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-------------- 170 L D V + + +I++ +G A Sbjct: 259 FICLTLDAPVPGKRELDERTKTIAA---TPAVADIVKSSGGHEIAGGSGLGQQLFAGTDP 315 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGTSWSRIE 225 + L D+P++LK + + D L I+ ++ GG + Sbjct: 316 SLTWKDTLPWLLKHTDLPIVLKGIQ---THEDAYLASLHTPQIKAIILSNHGGRAMDTAP 372 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 P+ +L R YC E + GG++ G D++K++ LGA Sbjct: 373 ------------------PSIHTLMEIRKYCPEVFNRIEVWIDGGVKRGTDVVKALCLGA 414 Query: 282 SLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 415 KGVGVGRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 474 >gi|167626827|ref|YP_001677327.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596828|gb|ABZ86826.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 382 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 122/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RKI H ++ + ++ N+K FD + + L +I + LG+ Sbjct: 15 RKIYHRRVPKMFVDYCESGSWQQKTLEHNQKDFDKYFFRQKVLTDIQHR--SLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + S PL + + G G I+ A AAE+ + + + + ++ A + Sbjct: 73 EYSMPLAFAPV-GLLGMQHADGEIHA--AKAAEEFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGNRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ-------------------------PNGNTNFADL-------------SSKIALLSSA 181 I FA L + + Sbjct: 189 INLSTKTYWCLNMLKTKNRTFGNIANHAENKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+++K + + + D + +G ++ GG S + +I Sbjct: 249 WNGPMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISMLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA G + P + Sbjct: 299 ----------VDAVDPKLEVLIDSGIRSGQDLLKAKALGAKAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFHQEMDKTMAFCGFTDIN 373 >gi|194098837|ref|YP_002001900.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae NCCP11945] gi|239999123|ref|ZP_04719047.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae 35/02] gi|240013969|ref|ZP_04720882.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae DGI18] gi|240016410|ref|ZP_04722950.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae FA6140] gi|240080530|ref|ZP_04725073.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae FA19] gi|240113102|ref|ZP_04727592.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae MS11] gi|240115858|ref|ZP_04729920.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae PID18] gi|240118156|ref|ZP_04732218.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae PID1] gi|240121537|ref|ZP_04734499.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae PID24-1] gi|240123704|ref|ZP_04736660.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae PID332] gi|240125895|ref|ZP_04738781.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae SK-92-679] gi|240128407|ref|ZP_04741068.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae SK-93-1035] gi|254493900|ref|ZP_05107071.1| L-lactate dehydrogenase [Neisseria gonorrhoeae 1291] gi|260440327|ref|ZP_05794143.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae DGI2] gi|268594959|ref|ZP_06129126.1| L-lactate dehydrogenase [Neisseria gonorrhoeae 35/02] gi|268596662|ref|ZP_06130829.1| L-lactate dehydrogenase [Neisseria gonorrhoeae FA19] gi|268599187|ref|ZP_06133354.1| L-lactate dehydrogenase [Neisseria gonorrhoeae MS11] gi|268601534|ref|ZP_06135701.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID18] gi|268603872|ref|ZP_06138039.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID1] gi|268682336|ref|ZP_06149198.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID332] gi|268684493|ref|ZP_06151355.1| L-lactate dehydrogenase [Neisseria gonorrhoeae SK-92-679] gi|268686804|ref|ZP_06153666.1| L-lactate dehydrogenase [Neisseria gonorrhoeae SK-93-1035] gi|291043620|ref|ZP_06569336.1| L-lactate dehydrogenase [Neisseria gonorrhoeae DGI2] gi|293398929|ref|ZP_06643094.1| L-lactate dehydrogenase (cytochrome) [Neisseria gonorrhoeae F62] gi|193934127|gb|ACF29951.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae NCCP11945] gi|226512940|gb|EEH62285.1| L-lactate dehydrogenase [Neisseria gonorrhoeae 1291] gi|268548348|gb|EEZ43766.1| L-lactate dehydrogenase [Neisseria gonorrhoeae 35/02] gi|268550450|gb|EEZ45469.1| L-lactate dehydrogenase [Neisseria gonorrhoeae FA19] gi|268583318|gb|EEZ47994.1| L-lactate dehydrogenase [Neisseria gonorrhoeae MS11] gi|268585665|gb|EEZ50341.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID18] gi|268588003|gb|EEZ52679.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID1] gi|268622620|gb|EEZ55020.1| L-lactate dehydrogenase [Neisseria gonorrhoeae PID332] gi|268624777|gb|EEZ57177.1| L-lactate dehydrogenase [Neisseria gonorrhoeae SK-92-679] gi|268627088|gb|EEZ59488.1| L-lactate dehydrogenase [Neisseria gonorrhoeae SK-93-1035] gi|291012083|gb|EFE04072.1| L-lactate dehydrogenase [Neisseria gonorrhoeae DGI2] gi|291610343|gb|EFF39453.1| L-lactate dehydrogenase (cytochrome) [Neisseria gonorrhoeae F62] gi|317164416|gb|ADV07957.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae TCDC-NG08107] Length = 390 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 115/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGGDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE VSM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|194884141|ref|XP_001976154.1| GG20155 [Drosophila erecta] gi|190659341|gb|EDV56554.1| GG20155 [Drosophila erecta] Length = 366 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 111/333 (33%), Gaps = 61/333 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVM 98 +D S G+++ +PL I+ KM A AA K + + Sbjct: 54 DVSRLDISCHIFGEQMKWPLGIAPTA--MQKMAHPEGEVANARAAGKAGSIFILSTLSTT 111 Query: 99 -FSD-----HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQA---- 140 D + IK F+L Y T+ +N A+ L D + +A Sbjct: 112 SLEDLATGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVRN 171 Query: 141 ---------------VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 V G + + + + + IA L +P Sbjct: 172 NFSLPSHLTLANFQGVKATGVGNAAMGASGINAYVSSQFDPTITW--KDIAWLKGITHLP 229 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +++K V L++ D L + G ++ G + + + +I Sbjct: 230 IVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEI----------- 275 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAA 304 + GG+ G DI K++ LGA + P A + V Sbjct: 276 ------VEAVGENLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEEM 329 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + LRK+F ++M L+G + + ++ +A++ H+ Sbjct: 330 LSVLRKDFEITMALIGCQTLGDI--TSAMVAHE 360 >gi|304312691|ref|YP_003812289.1| L-lactate dehydrogenase [gamma proteobacterium HdN1] gi|301798424|emb|CBL46649.1| L-lactate dehydrogenase [gamma proteobacterium HdN1] Length = 386 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 65/371 (17%), Positives = 117/371 (31%), Gaps = 83/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 + + +N + F + L R L ++ + LG+ + PL ++ M G Sbjct: 35 ANAEHTLAKNTQAFGNITLRQRVL--RDVSQLSTQHQLLGQHVQMPLALAPLGMAGLFAT 92 Query: 71 MIERINRNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIK----- 106 E A AAE+ V ++ + Q M D +A+K Sbjct: 93 RGEV---QAARAAEQMGVPFSLSTVGICSLEEVRAATQQACWFQLYMLRDRDAVKALLER 149 Query: 107 ------------------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 F R Y + G + + + +G G Sbjct: 150 ALQAGCTTLLFTVDLPVAGFRQRDYRNGMLDPGLTGRFAKAVQLAPR--PKWLLDVGLRG 207 Query: 149 LFLHL-NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSS 197 H N + PN F I L L+LK + + Sbjct: 208 KPHHFGNLSDRVANPNDIQAFKAWIDAQFDPSVTWQDIRWLREQWPHTLVLKGI---MEP 264 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + +G ++ GG + + +P+ +S R Sbjct: 265 EDAVQAVHAGADAIVLSNHGGRQLDSVAATIHQ------------LPSVVSALEGR---- 308 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSM 316 + GG+R+G+D+LK++ LGA + P+ A V A + + E ++M Sbjct: 309 -LPVLLDGGVRSGIDLLKALALGAQGALIGRPWAWSLAAQGQLGVEALLRDFQTELSIAM 367 Query: 317 FLLGTKRVQEL 327 L G R++E+ Sbjct: 368 ALCGVSRIEEI 378 >gi|238757344|ref|ZP_04618530.1| FMN-dependent dehydrogenase [Yersinia aldovae ATCC 35236] gi|238704383|gb|EEP96914.1| FMN-dependent dehydrogenase [Yersinia aldovae ATCC 35236] Length = 423 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 121/375 (32%), Gaps = 91/375 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 + + N F W L R L I +VD SV LG P+++ G K Sbjct: 49 ASSESTLKSNVDDFALWELKQRVLSGI--TDVDLSVHLLGNTHKLPVMLGPVGFAGMYYK 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 E ++ AA+K + + + + + +R+ L S L + + Sbjct: 107 DGEI---EVSYAADKMGIPQCLSTFSI----CSMEDVASVRK----GPLYSQL-YIFKHR 154 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN----PLQEIIQPNGNTNF------------------ 168 + + + +G D +F+ ++ P++E + NG Sbjct: 155 ELTLDMLER-CKKIGIDTIFITIDTPYTPVRERDERNGFRASPVPSAKMILSMLSHPFWS 213 Query: 169 ---------------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS- 206 + + + L +D L ++ +L +K Sbjct: 214 VGAIAHGVPKVHQVDKYEKLGSWIMEQSVKLGREIDPTLTWDDIRWFREQWKGKLVVKGI 273 Query: 207 ------------GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 G ++ GG S +I D Sbjct: 274 LSAQDAQLAADAGADAIVVSNHGGRQLDPASSTIRRLPEIKNALGD-------------- 319 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFI 313 + + I GG+R G DI+K+I LGA+ L ++ + V+ +IE L+ E Sbjct: 320 ---QIEIIFDGGIRRGSDIIKAIALGANCVSLGRAYIYGLGAGGEKGVLRSIEILKNEME 376 Query: 314 VSMFLLGTKRVQELY 328 ++ ++G K + EL Sbjct: 377 PALKMMGFKSINELR 391 >gi|302909981|ref|XP_003050192.1| hypothetical protein NECHADRAFT_85061 [Nectria haematococca mpVI 77-13-4] gi|256731129|gb|EEU44479.1| hypothetical protein NECHADRAFT_85061 [Nectria haematococca mpVI 77-13-4] Length = 393 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 102/323 (31%), Gaps = 24/323 (7%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + ++ L L ++ V G S P+ IS G Sbjct: 74 AAGEWAYRHNLEVWEKARLRPHQLASVTGLNETLGVSIFGHNFSAPIFISPAARGAYGDP 133 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 +R N AA + V + A + +NL Sbjct: 134 DRAELNFVDAAAEEDVLYVAALYASKTIEEIGAQRKKHDSTIFQQIYSNANLSVTWDAMK 193 Query: 132 FGVQKAHQA-VHVLGADGLF-LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + +A V + A H + NG T+ + S +P++LK Sbjct: 194 RAEAQGVKAFVWTIDAPATSTRHRAARYDTTNANGATSVLSW-ELFDEIKSHTKLPIILK 252 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + ++ D ++ G ++ GG S ++ ++ Sbjct: 253 GIT---TTEDALKAVEKGADGIWLSNHGGRQVDYSPSPLEIAYELR-------------- 295 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 A + + +A G+R G D++K + LG GL PF+ + + I+ L+ Sbjct: 296 RNAPEVFEKTEVLADSGVRYGSDVIKLLALGVKAVGLGRPFMYSNIYGVEGPKKLIQILK 355 Query: 310 KEFIVSMFLLGTKRVQELYLNTA 332 E + +G + +L+ A Sbjct: 356 TEILADAAQIG---INDLHNIPA 375 >gi|59801066|ref|YP_207778.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae FA 1090] gi|59717961|gb|AAW89366.1| putative L-lactate dehydrogenase [Neisseria gonorrhoeae FA 1090] Length = 390 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 115/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGGDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALVVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE VSM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|302510741|ref|XP_003017322.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] gi|291180893|gb|EFE36677.1| FMN dependent dehydrogenase, putative [Arthroderma benhamiae CBS 112371] Length = 508 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 119/355 (33%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL+ P++ S ++ +A Sbjct: 158 NNSIYRSILLRPRVF--VDCKNCSLATSMLGYKLNTPIIASPTA--MARLAHPSGEAGIA 213 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ L A++ Sbjct: 214 AACAKFGAMQIISNNASMTPEEIVKGAPPDQVFGWQLYVQIERKKSEAMLARINKLKAIK 273 Query: 128 ---LNYDFGVQKAHQAVHVLG------ADGLFLHLNPLQEIIQPNGNTN--FAD------ 170 L D V + A + + EI +G FA Sbjct: 274 FICLTLDAPVPGKRELDERTKVIADTPAVADIVKSSGGHEIAGGSGLGQQLFAGTDPSLT 333 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L D+P++LK + + I I+ ++ GG + Sbjct: 334 WKDTLPWLLKHTDLPIVLKGIQTHEDAY-IASLHTPQIKGIILSNHGGRAMDTAP----- 387 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ +L R YC E + GG++ G D++K++ LGA G+ Sbjct: 388 -------------PSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKGVGV 434 Query: 287 ASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 435 GRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 489 >gi|302423212|ref|XP_003009436.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261352582|gb|EEY15010.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 376 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 92/312 (29%), Gaps = 36/312 (11%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N + R L +++ + LG S P I+ G ER Sbjct: 78 EQSYRHNLDIWKSVQFRSRHLSDVTKLNETLATTILGYNFSAPFFIAPAARGVYGDPERA 137 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N AA K + + + S + V+ + N Sbjct: 138 ELNFVEAAGKENI-LYIPSMYASKTIEEIAAGKSNSTLNGPQVIFQQI-YTNANLSVTWD 195 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 +A GA + ++ P + V L Sbjct: 196 NIRRA-ERTGAKAIVFTIDA------PGNSVRHRAARYDTTN----------ANSVSSAL 238 Query: 196 SSMDIEL--GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 + D+ L ++ G + I+ GG ++ +I A Sbjct: 239 TW-DVRLCWAVEKGAQAIYISNHGGRQLDHTPGPLEIAYEIY--------------RNAP 283 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFI 313 + +A G+R G D+LK + LG G+ PF+ + + V AI+ +R E + Sbjct: 284 QVFQQVDVLADSGIRYGSDVLKLLALGVKAVGMGRPFMYSNVYGLEGVTKAIDIMRTEIV 343 Query: 314 VSMFLLGTKRVQ 325 LG +Q Sbjct: 344 RDGAQLGATNLQ 355 >gi|328932956|gb|AEB70295.1| LctO [Streptococcus iniae] Length = 404 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + F G KL+ P++++ + Sbjct: 52 AGDTFTLHENIRSFNHKLIVPHGLKG--VENPSTEITFDGDKLASPIILAPVA------A 103 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHNAIKS-------FELRQYAPHTV--- 118 ++ A V + S ++ F+ + Sbjct: 104 HKLANEQGEIASAKGVKEFGTIYTTSSYSTTDLPEISQTLGDSPHWFQFYYSKDDGINRH 163 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + PNG D Sbjct: 164 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PNGAGKTMDYVY 221 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 222 KATKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 278 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 279 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 321 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E + E + M L GT+ + + L N Sbjct: 322 VALGRPVIYGLAMGGSVGTRQVFEKINDELKMVMQLAGTQTIDDVKHFKLRHNPY 376 >gi|312195251|ref|YP_004015312.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EuI1c] gi|311226587|gb|ADP79442.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EuI1c] Length = 392 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 114/357 (31%), Gaps = 70/357 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N F W LI R L + E D SVE G++ P+ ++ + G G Sbjct: 53 AGDEATQRANVAAFQTWGLIPRML--VGAVERDLSVELWGRRWPAPVFLAPI-GVIGLCA 109 Query: 71 MIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFEL 110 + A AA + V M + Q D +S Sbjct: 110 QSGHGDLETARAAARADVPMVASTLTVDPLEDVAAELGETPGFFQLYTPKDRELAESLVA 169 Query: 111 RQYA------------------PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 R P + SN ++ + + +LGA+ Sbjct: 170 RAERAGFAGIVVTLDTWVTGWRPRDLATSNFPQLRGHCLANYFTDPRFRAMLGAEPAE-- 227 Query: 153 LNPLQEIIQPNGNTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 Q + T + +A L S D+PL+LK + D +G Sbjct: 228 --TAQAAVLQWATTFGHSVTWDDLAWLRSLTDLPLILKGIQH---PDDARRARDAGADGI 282 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 + GG + G+P L + + G+R+G Sbjct: 283 YCSNHGGRQ------------------ANGGLPAIQCLPDVVEAAGDLPVLFDSGVRSGA 324 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D++K++ LGAS G+ P+ A+ D +V + +L E + M + G + +L Sbjct: 325 DVVKALALGASAVGIGRPYAYGLALGGVDGIVHVLRTLLAEADLIMAVDGYPALADL 381 >gi|294618921|ref|ZP_06698428.1| glycolate oxidase [Enterococcus faecium E1679] gi|291594837|gb|EFF26207.1| glycolate oxidase [Enterococcus faecium E1679] Length = 366 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 42 DEWTMKENTTSFNSKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 100 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 156 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 157 VEAGAKSIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 216 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 217 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 273 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 274 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 316 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 317 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 365 >gi|302666314|ref|XP_003024758.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] gi|291188827|gb|EFE44147.1| FMN dependent dehydrogenase, putative [Trichophyton verrucosum HKI 0517] Length = 508 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 119/355 (33%), Gaps = 62/355 (17%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL+ P++ S ++ +A Sbjct: 158 NNSIYRSILLRPRVF--VDCKNCSLATNMLGYKLNTPIIASPTA--MARLAHPSGEAGIA 213 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ L A++ Sbjct: 214 AACAKFGAMQIISNNASMTPEEIVKGAPPDQVFGWQLYVQIERKKSEAMLARINKLKAIK 273 Query: 128 ---LNYDFGVQKAHQAVHVLG------ADGLFLHLNPLQEIIQPNGNTN--FAD------ 170 L D V + A + + EI +G FA Sbjct: 274 FICLTLDAPVPGKRELDERTKVIADTPAVADIVKSSGGHEIAGGSGLGQQLFAGTDPSLT 333 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L D+P++LK + + I I+ ++ GG + Sbjct: 334 WKDTLPWLLKHTDLPIVLKGIQTHEDAY-IASLHTPQIKGIILSNHGGRAMDTAP----- 387 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGL 286 P+ +L R YC E + GG++ G D++K++ LGA G+ Sbjct: 388 -------------PSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKGVGV 434 Query: 287 ASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 435 GRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 489 >gi|83954605|ref|ZP_00963316.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. NAS-14.1] gi|83840889|gb|EAP80060.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sulfitobacter sp. NAS-14.1] Length = 364 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 21/166 (12%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 +G FA + + L + VP+++K L + D + +G+ ++ GG Sbjct: 201 DGMMVFAPTWADLTRLIADSPVPVIIKGC---LRAADARRFVDAGVAGIIVSNHGGRVLD 257 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + P + + + GG+R G D+ K++ LGA Sbjct: 258 TVPA-----------------PVTQLAAVVQAVGQDVPVYLDGGIRRGSDVFKALALGAE 300 Query: 283 LGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + P + + D + + LR E V+M L G V ++ Sbjct: 301 AVLVGRPVMHGLIVDGARGASQVLRRLRDELEVTMALCGCATVADI 346 >gi|253583823|ref|ZP_04861021.1| dehydrogenase [Fusobacterium varium ATCC 27725] gi|251834395|gb|EES62958.1| dehydrogenase [Fusobacterium varium ATCC 27725] Length = 338 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 113/312 (36%), Gaps = 46/312 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------L 79 + +I R + E + + GK+LSFP L + +TG M + + Sbjct: 52 LKNIKVIMRTIH--DATEPILTTKLWGKELSFPCLGAPITGTKFNMGGGVTEEEYCLDVI 109 Query: 80 AIAAEKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A + + M + + P + + ++L + G Sbjct: 110 GGAIDAGTIGMIGDTGDASCYTAGLEAIKTNGGMGVAIIKPRSND-EIIKRIRLAEEAGA 168 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 V G + L QP G +FA+L L+++ +P ++K + Sbjct: 169 IAVGVDVDGAGLITMKL-------FGQPVGPKSFAEL----KELAASTKLPFIVKGI--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS + +L +++G+ ++ GG + + ++ DI + Sbjct: 215 LSVDEAKLCVEAGVDTIVVSNHGGRVLNETLAPCEVIEDI-----------------VKA 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFI 313 ++ + G +R GVDILK + LGA + P ++ + V E+L+ + Sbjct: 258 VGDKINVLVDGSVREGVDILKYMALGAKGVLVGRPLTWGSIGGRQEGVKTIFENLKGQLT 317 Query: 314 VSMFLLGTKRVQ 325 +M L G K + Sbjct: 318 QAMILTGVKDIN 329 >gi|90761110|gb|ABD97860.1| glycolate oxidase [Pachysandra terminalis] Length = 186 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K V L++ D + +++G ++ G + Sbjct: 30 WKDVKWLQTITTLPILVKGV---LTAEDTRIAIQNGAAGIIVSNHGARQLDYSPA----- 81 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T ++LE + GG+R G D+ K++ LGAS + P Sbjct: 82 -------------TIMALEEVVKAAQGRVPVFVDGGIRRGTDVFKALALGASGIFIGRPV 128 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L A + V ++ L EF ++M L G + ++E+ N L Sbjct: 129 LFALAAEGEAGVRKVLQMLHDEFELTMALSGCRSLKEITRNHILTEW 175 >gi|323223894|gb|EGA08192.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 239 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 21/166 (12%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 IA + +P+++K + S D E+ +++G ++ GG S D+ Sbjct: 91 EDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLP 147 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I A+ I G+R G + K++ GA + + P L Sbjct: 148 AI-----------------AKVVNKRVPVIFDSGVRRGSHVFKALASGADIVAVGRPVLY 190 Query: 293 PA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + V + IE L KE ++M L G + ++++ L + Sbjct: 191 GLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTRLLTEKE 236 >gi|294011347|ref|YP_003544807.1| L-lactate dehydrogenase (cytochrome) [Sphingobium japonicum UT26S] gi|292674677|dbj|BAI96195.1| L-lactate dehydrogenase (cytochrome) [Sphingobium japonicum UT26S] Length = 387 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 110/368 (29%), Gaps = 86/368 (23%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + ++RN L R L ++D + G+KL P+ ++ + + Sbjct: 36 AEVTLERNLADLAGTALRQRVL--TDVSQLDLTTTLFGQKLGLPVALAPI------GLAG 87 Query: 75 INRNLAIAAEKT-----KVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL- 123 +N + + + D A F+L + + L Sbjct: 88 MNARRGEVQAARAAEAAGIPFCLSTVSACPLDEVAAGVNAPFWFQLYMIRDRGFMRALLQ 147 Query: 124 -------GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 A+ D V + + G G + ++ + Q + +A + Sbjct: 148 KAKALGCSALIFTVDMPVPGSRYRDYHSGLAGAAGTVGAIRRLGQAMRHPRWAWDVGLLG 207 Query: 177 L---------------------------------------LSSAMDVPLLLKEVGCGLSS 197 + D PL++K V L S Sbjct: 208 RPHQLGNIAPVLGKNTGLEDFFAWMRTNFDPGVTWRDLDFIRDIWDGPLIIKGV---LDS 264 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D ++ ++ G ++ GG + S I D Sbjct: 265 EDAQMAVRVGADGIVVSNHGGRQLDGVPSTARALPPIADAVDD----------------- 307 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSM 316 + GG+R+G+D+++ + LGA L ++ A VA + L + E V+M Sbjct: 308 RLTVLVDGGVRSGLDVVRMLALGAKGVLLGRAWVYALAAGGQAGVAHVLRLIEAEMRVAM 367 Query: 317 FLLGTKRV 324 L G++ + Sbjct: 368 ALTGSRDI 375 >gi|254672181|emb|CBA05037.1| L-lactate dehydrogenase [Neisseria meningitidis alpha275] Length = 390 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F + + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKEIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|188989513|ref|YP_001901523.1| L-lactate dehydrogenase [Xanthomonas campestris pv. campestris str. B100] gi|259491778|sp|B0RLM2|LLDD_XANCB RecName: Full=L-lactate dehydrogenase [cytochrome] gi|167731273|emb|CAP49447.1| L-lactate dehydrogenase (cytochrome) [Xanthomonas campestris pv. campestris] Length = 386 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 119/368 (32%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLN-PLQEIIQPNGNTNFAD------- 170 ++ GV V + A N PL+ ++Q + +A Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNAPLRRMLQAMTHPRWAWDVGLLGK 200 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIE 201 L I L++ D + K++ L D Sbjct: 201 PHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A E + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A V + + +E V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAMILT 362 Query: 320 GTKRVQEL 327 GT V E+ Sbjct: 363 GTHSVAEI 370 >gi|225679554|gb|EEH17838.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 406 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 112/375 (29%), Gaps = 82/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLI--SSM---TGG 67 ++ + RN+ FD L R L VD S G+K P+ I S+M GG Sbjct: 42 ADEENALRRNRGAFDRLILRPRVL--RDVSRVDTSTTLFGEKYLIPIGISPSAMQRLAGG 99 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIK----SFEL-------- 110 N ++ ++A AA M + S + + F+L Sbjct: 100 NGEI------DMARAAASRGTTMILSSHTTCALEDVIRAPDGGSLVDFWFQLYISQNRER 153 Query: 111 ------RQYAP---------HTVLISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLF 150 R A T ++ N A+ L + HQ ++ ++G Sbjct: 154 CAQVIGRAEAAGYKALVLTVDTPILGNRINERKTALILPPHLSLANLHQTINQSSSEGNS 213 Query: 151 LHLNP------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL---KE-----VGCGLS 196 P L+ + S + K + ++ Sbjct: 214 PQAKPTMNRVLLEARNAQEAAKIARGSHDTLNDASLTWSNTISWLRSKSSLKIILKGIMT 273 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + D L + G ++ GG + S + +I Sbjct: 274 AEDALLAIDYGADAVIVSNHGGRQLDSVSSTIEALPEI-----------------VSAVR 316 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVS 315 I G+ G D+ K++ LGA + L + V+ ++ L +E + Sbjct: 317 GRIPVIIDSGITRGSDVFKALALGADFTLVGRSALWGLSFGGQEGVIRVLDILERELSRT 376 Query: 316 MFLLGTKRVQELYLN 330 M L G V E+ + Sbjct: 377 MALAGAGTVGEIRRS 391 >gi|307726257|ref|YP_003909470.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] gi|307586782|gb|ADN60179.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] Length = 381 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 127/365 (34%), Gaps = 71/365 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ FD L+ R L ++S E SV LG+++ FPL+I+ TG N+ Sbjct: 34 ADDESGLTHNRSAFDKLQLLPRRLSDVSTRE--QSVALLGRRIPFPLVIAP-TGLNSAFW 90 Query: 73 ERINRNLAIAAEKTKV--AMAVGSQRVM---FSDHNAIKSFEL----RQYAPHTVLISN- 122 + + LA AA K + A++ S + + F+L R A V + Sbjct: 91 PKGDLALARAAGKAGIPFALSTASNMSIEEVAKGADGELWFQLYVVHRNLAKSLVNRARA 150 Query: 123 ----------------LGAVQLNYDFGV---QKAHQAVHVL-GADGLFLHL--------- 153 L F + A AV L L+ +L Sbjct: 151 ARYATLILTTDVAVNGFRRRDLRNGFAMPFKASARAAVDGLSHPRWLWSYLMNGMPELKN 210 Query: 154 -------NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + + L LL+K + L++ D ++ Sbjct: 211 FATDDASDTASQAAVLRRQMDASFSWDDLRRLRDDWPGKLLVKGI---LTADDAVRCIEL 267 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG + + + T L + + + I G Sbjct: 268 GADGVIVSNHGGRQLADLPA------------------TADVLPDIVEHTSGSTVILDSG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++K+I LGA+ L L A V I + +E ++ L+G + V Sbjct: 310 IRTGADVVKAIALGANAVMLGRATLYGLAARGETGVSDVIGMITRETDRTLALIGCRSVD 369 Query: 326 ELYLN 330 EL + Sbjct: 370 ELDRS 374 >gi|303290108|ref|XP_003064341.1| glycolate oxidase [Micromonas pusilla CCMP1545] gi|226453939|gb|EEH51246.1| glycolate oxidase [Micromonas pusilla CCMP1545] Length = 422 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%) Query: 164 GNTNFA-DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 G+ + + SS I L S + +P++LK V ++ D L + G+ ++ GG Sbjct: 245 GDRDASLTWSSLIPWLKSIVPALPIILKGV---MTREDAALAVAHGVDGVWVSNHGGRQL 301 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 S +++ D G N + GG+R G D+LK++ LGA Sbjct: 302 DGAPSTLRALAEVVAGVND-G-------RNGNATSNVVPVVFDGGVRRGSDVLKALALGA 353 Query: 282 SLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + + P A V AI+ L +E SM L G ++ Sbjct: 354 DVVAIGRPVAWGLACGGEAGVRKAIDVLTEELESSMRLAGVTSARDAREK 403 Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF----LGKKLSFPLLISSMT 65 + + N F D L R L + +VD S LG+KL PLL++ + Sbjct: 42 AETESTLRANASAFADVTLWPRVL--VDVRDVDTSTSAPAIGLGRKLRTPLLVAPVA 96 >gi|163746894|ref|ZP_02154251.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Oceanibulbus indolifex HEL-45] gi|161380008|gb|EDQ04420.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Oceanibulbus indolifex HEL-45] Length = 341 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 118/348 (33%), Gaps = 59/348 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ F ++ R L ++ V LG+KL+ PLLI+ +++ Sbjct: 15 DEQTASANEAAFQQAQVMPRMLRDLRGG--STEVSVLGQKLAAPLLIAPFA--YQRLLH- 69 Query: 75 INR---NLAIAAEKTKVAMAVGSQRVMFSDH-----NAIKSFEL-----RQYAP------ 115 N A AE + M + +Q D + F+L R+ Sbjct: 70 -NEGETATARGAEAQSIKMVLSAQSSEPLDSVRASGPSSDWFQLHWMGSRETTQALAQMA 128 Query: 116 -----HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-------LQEIIQPN 163 + ++++ VQ D ++ Q + A L P Q II + Sbjct: 129 LAAGFNRLILTIDAPVQGVRDQEIEAQFQLPPDVSAVNLAQFAPPAFTPRENAQSIIFDH 188 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +A L + VPLLLK + L D + G ++ GG R Sbjct: 189 IAETLPTWAD-VAWLIKTLQVPLLLKGI---LHPEDAAQAQRIGAAGVIVSNHGGRVLDR 244 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + I + + GG+R GVDIL ++ LGA Sbjct: 245 APATLSALPAI-----------------VDRVGPDYPVLMDGGIRRGVDILIALALGAKA 287 Query: 284 GGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P A+ V + LR E ++M L G VQ++ + Sbjct: 288 VLVGRPIACGLAVAGDLGVSHVLRLLRDELEIAMLLSGCATVQDIRRD 335 >gi|310795146|gb|EFQ30607.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 384 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 115/338 (34%), Gaps = 70/338 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRN 78 RN F L R + S S LG + P+ ++ +M Sbjct: 54 RNGAVFRSILLRPRVFADCSRC--SLSTNILGNPVGMPVYVAPAAMA------------K 99 Query: 79 LAIAAEKTKVAMAVGSQR--VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 LA A+ + ++ A R + S + + + Q PH + A QL ++ Sbjct: 100 LAHASGEVGISAACSRFRGLQIISKNAFMSPSAIVQAGPHA-----VFAWQLYVLKDIKA 154 Query: 137 AHQAVHVLGA----DGLFLHLNPL----QEIIQPNGNTNFAD--------------LSSK 174 + + + A + L L+ +E + T A Sbjct: 155 TERTLAQIRAIPQIKFIVLTLDAPFPGKREADERFKMTEVAGGAAPQVWGTESSLTWRKT 214 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L+ +P++LK + + L ++ I+ GG + Sbjct: 215 LEWLTKQTSLPIVLKGIQTHEDAYAATLFPS--VKGIIISNHGGRALDTT---------- 262 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPF 290 + L R YC + + GG+R G D++K++ LGA G+ Sbjct: 263 --------LTPVQVLLEIRKYCPQVLGRIDVLIDGGVRRGTDVVKALALGAKGVGIGRAA 314 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A+ V A++ L E + SM L+G +RV +L Sbjct: 315 LYGLAVGGQAGVERALQILADEIVTSMRLIGVERVDQL 352 >gi|296129974|ref|YP_003637224.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cellulomonas flavigena DSM 20109] gi|296021789|gb|ADG75025.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Cellulomonas flavigena DSM 20109] Length = 343 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 92/302 (30%), Gaps = 42/302 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D S LG +L+ P++++ +++ + S + + Sbjct: 57 DLSTTLLGAELAAPVVVAPTA--FHRLAHPDGEVATAVGVAAAGGLMTLSMMATVAVEHV 114 Query: 105 IK-----SFELRQYAPHTVLISNL-GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 F L + + A V A V L L E Sbjct: 115 ADVGVPLWFGLYLQPDRGFTAAVVARAQDAGCRALVVTADSPVRGRHTRDLAHGFRALPE 174 Query: 159 IIQPNGNTNFAD-----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + + +A L + +P+L+K V L D L + G Sbjct: 175 GMVCENMRDADWRVRDLVVDADLTWDDVAWLRATTSLPVLVKGV---LHPADARLAVGHG 231 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGG 266 + ++ GG + T +L + + GG Sbjct: 232 VDGVIVSNHGGRQLDGA------------------VSTLDALPGVVDAVAGRVPVLLDGG 273 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D L ++ LGA + P L A+ + V A + L E ++ L+G +R Sbjct: 274 VRSGTDALVALALGADAVMVGRPVLWGLALGGAAGVRAVLGDLADELAHALTLVGARRPG 333 Query: 326 EL 327 +L Sbjct: 334 DL 335 >gi|296810262|ref|XP_002845469.1| L-lactate ferricytochrome c oxidoreductase [Arthroderma otae CBS 113480] gi|238842857|gb|EEQ32519.1| L-lactate ferricytochrome c oxidoreductase [Arthroderma otae CBS 113480] Length = 494 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 110/348 (31%), Gaps = 80/348 (22%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR 96 + + LG KL P+ S +M LA + + +A A Sbjct: 159 VDCKNCSLATTILGHKLDTPIYASPTAMA------------RLAHTSGEAGIAAACAKFG 206 Query: 97 VM--FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 M S++ ++ E+ + AP + VQ++ + + + L L+ Sbjct: 207 AMQIISNNASMTPEEIVKDAPSDQMFGWQLYVQVDRKKSEAMLARINKIKAIKFICLTLD 266 Query: 155 ---PLQEIIQPNGN----------------------------TNFAD------LSSKIAL 177 P + + FA + Sbjct: 267 APVPGKRELDERTKAIAATPAIADIVKSSGGHEIAGGGGLGQQLFAGTDPSLTWKDTLPW 326 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L D+P++LK + + I I+ ++ GG + Sbjct: 327 LLKHTDLPIVLKGIQTHEDAY-IASLHSPQIKAVILSNHGGRAMDTAP------------ 373 Query: 238 FQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFL-K 292 P +L R YC E + GG++ G D++K++ LGA G+ L Sbjct: 374 ------PAVHTLMEIRKYCPEVFNRVEVWIDGGIKRGTDVVKALCLGAKGVGVGRNALFS 427 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 A V E L E + +M LLG +V++L ++N + Q Sbjct: 428 LAAGGIQGVERMFEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 475 >gi|116250213|ref|YP_766051.1| lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115254861|emb|CAK05935.1| putative lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 382 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 116/380 (30%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-------------- 58 + RN F+ L+ L +VD SV +G+KL+ P Sbjct: 32 ADDEVTYRRNTAAFEACDLVPDVLRG--VADVDMSVTVMGQKLAMPVYCSPTALQRLFHH 89 Query: 59 ----------------LLISSMTGGNNKMIERI-----------------NRNLAIAAEK 85 +SS+ + + +I NR + A+ Sbjct: 90 QGERAVAAAAAKHGTMFGVSSLGTISLEEARQISNGPQVYQFYFHKDRGLNREMMARAKN 149 Query: 86 TKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V AM V S + + F + P + ++ + + + + Sbjct: 150 AGVQAMMLTVDSITGGNRERDKRTGFAI----PFKLNLAGMTQFAVKPSWAIDWLTH--E 203 Query: 143 VLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 L H+ + + + + +A + P LK + +S Sbjct: 204 RFRLPQLENHVKMDGGALSISRYFTEMLDPSMSW--DDVAEMVREWGGPFCLKGI---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + + G ++ GG S D ++I Sbjct: 259 VEDAKRAAEIGCSGIVLSNHGGRQLDGSRSAFDQLAEI-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A+E++R E Sbjct: 302 DRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETMRTEIERG 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V +L R Sbjct: 362 MKLMGCTSVSQLTRRNLRFR 381 >gi|327295673|ref|XP_003232531.1| mitochondrial cytochrome b2 [Trichophyton rubrum CBS 118892] gi|326464842|gb|EGD90295.1| mitochondrial cytochrome b2 [Trichophyton rubrum CBS 118892] Length = 493 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 119/358 (33%), Gaps = 68/358 (18%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL+ P++ S ++ +A Sbjct: 143 NNSIYRSILLRPRVF--VDCKNCSLATSMLGYKLNTPIIASPTA--MARLAHPSGEAGIA 198 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ + A++ Sbjct: 199 AACAKFGAMQIISNNASMTPEEIVKGATPDQVFGWQLYVQIERKKSEAMLARINKIKAIK 258 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ-----------PNGNTNFAD--- 170 L D V + A + +I++ G FA Sbjct: 259 FICLTLDAPVPGKRELDERTKAIA---STPAVADIVKSSGGHEITGGGGLGQQLFAGTDP 315 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + L D+P++LK + + I I+ ++ GG + Sbjct: 316 SLTWKDTLPWLLKHTDLPIVLKGIQTHEDAY-IASLHTPQIKGIILSNHGGRAMDTAP-- 372 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASL 283 P+ +L R YC E + GG++ G D++K++ LGA Sbjct: 373 ----------------PSIHTLMEIRKYCPEVFNRIEVWIDGGIKRGTDVVKALCLGAKG 416 Query: 284 GGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 417 VGVGRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 474 >gi|257463754|ref|ZP_05628142.1| hydroxyacid oxidase 1 [Fusobacterium sp. D12] gi|317061296|ref|ZP_07925781.1| dehydrogenase [Fusobacterium sp. D12] gi|313686972|gb|EFS23807.1| dehydrogenase [Fusobacterium sp. D12] Length = 340 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 111/332 (33%), Gaps = 44/332 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N HL R L + + +VE G+ LS P+L + +TG Sbjct: 39 CGSGFSFQHNYTTLKALHLQMRCLHQ--VKDPKTAVEIFGQNLSMPILGAPITGTKFNFG 96 Query: 73 ERINR-----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + ++ + A+ +G + I S + + LG Sbjct: 97 GYVTQEEFCDDIILGAKAAGTLAMIGDTGDPAAYEAGIASLKKAKG---------LGIAI 147 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-----DLSSKIALLSSAM 182 + + + A + + ++ + F + +L + Sbjct: 148 IKPRHNEEIIKRIRLAEEASAIAVGIDLDGAGLL--TMKLFHQPVEPKSIEDLKILVQST 205 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P L+K + LS + + +++G+ ++ GG S ++ +I Sbjct: 206 KLPFLVKGI---LSVKEAKACVEAGVHAIVVSNHGGRVLDDCISPVEVLQEI-------- 254 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AV 301 + ++ +A G +R+G D+LK + LGA + P + ++ + + Sbjct: 255 ---------VKEVGDKIIVLADGNVRSGEDVLKYLSLGAKAVLVGRPCIWASVGNRQSGI 305 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + +M + G V + NT Sbjct: 306 ETLFHELQAQLYKAMLMTGNASVNSIAPNTIF 337 >gi|67527052|gb|AAY68321.1| putative L-lactate dehydrogenase [uncultured marine bacterium 66A03] Length = 383 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 115/371 (30%), Gaps = 83/371 (22%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + RN+K D + +FLG+ S P ++ + G ++ + Sbjct: 34 HAMSRNRKALDKVTFTPELMHGRFVPN--LETQFLGQTFSMPFGVAPI-GLSSMIWPLSE 90 Query: 77 RNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS------NLGA 125 +LA + K + +A S + S + F+L ++ S N Sbjct: 91 HHLAAMSAKLNIPYTLSTVAGASIEDIGSKSDGFGWFQLYAPHSREIMYSLLERAENSNM 150 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNP--------LQEIIQP---------NGNTNF 168 L V + + A N LQ + P NG F Sbjct: 151 QVLVVTGDVPGPSRREDMRKAGAPIGSRNATKMNLKMLLQILQHPRWALAALKLNGKLRF 210 Query: 169 ADL-------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ ++ + LLLK V + D Sbjct: 211 KNMEPYVPRDNTKPISEFIGEQLNGSLTWQYLSEIRKHWKGKLLLKGV---MQKSDAMKA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + G+ ++ GG + + I S+ A + + Sbjct: 268 VDIGVDGIVVSNHGGRQFDGNPAS---------------ISALPSIRQA--VGPKYPVVF 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA----MDSSDAVVAAIESLRKEFIVSMFLL 319 G+R+G+DIL+++ LGA + PFL + V +E +E I ++ + Sbjct: 311 DSGIRSGLDILRALALGADFVLVGRPFLYGLAAIGTRGGEHVARILE---EEIINALLQI 367 Query: 320 GTKRVQELYLN 330 G K++ EL Sbjct: 368 GAKKIPELRER 378 >gi|221068727|ref|ZP_03544832.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni KF-1] gi|220713750|gb|EED69118.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni KF-1] Length = 378 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 124/373 (33%), Gaps = 74/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L + ++D S+E G+K S P+ ++ + G Sbjct: 29 AYAEKTLARNVDDLADVALRQRVLK--NMSQLDTSIELFGEKFSIPVALAPV-GLTGMFA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN 122 R A+AA+K + + S V + A + F+L R + + + + Sbjct: 86 RRGEVQAAMAADKKGIPFTMSSVSVCPIEEVAPRLGRPMWFQLYVLKDRGFMKNALERAQ 145 Query: 123 ---LGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNTNF 168 + + D V A + G + LQ + P G + Sbjct: 146 AAGVSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRY--LQAVTHPHWALDVGLMGRPHT 203 Query: 169 AD-----------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGL 204 L + L + D + ++ L D + Sbjct: 204 LGNISTYKGQNVSLEDYMGYLGANFDPSISWSDLEWIRDFWKGPMLIKGILDPEDARDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + + +L +A + + +A Sbjct: 264 RFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQIKILA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+RNG+DI++ + LGA + F+ A + V + L KE V+M L K Sbjct: 306 DSGVRNGLDIVRLLALGADCTMIGRAFVYALAAEGEAGVTNLLNLLEKEMRVAMTLTSVK 365 Query: 323 RVQELYLNTALIR 335 V E+ L+R Sbjct: 366 NVSEI-TGDLLVR 377 >gi|115443412|ref|XP_001218513.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188382|gb|EAU30082.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 460 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 106/335 (31%), Gaps = 64/335 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRN 78 N F R + SV +G ++ P+ IS +M Sbjct: 130 ANGNIFKSILFRPRIF--VDCSSCSLSVTIMGNQVGLPIFISPAAMA------------K 175 Query: 79 LAIAAEKTKVAMAVGSQRV--MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 LA + + +A A + S + ++ ++ + P + + V + + + Sbjct: 176 LAHPSGEAGIASACSRFNALQIISKNASMSVADIVRAGPDA-VFAWQLYVLKDMNVTERI 234 Query: 137 AHQAVHVLGADGLFLHLNPL------------------QEIIQPNGNTNFADLSSKIALL 178 Q + + L L+ Q G + L Sbjct: 235 LAQVSKIPQIKFIVLTLDAPFPGKREADERYKAAVVAAGAPPQVWGTNATLTWKKTLNWL 294 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 +P++LK V + D L + ++ ++ GG + + Sbjct: 295 CGHTRLPIVLKGVQ---THEDAYLATQFPAVKGIILSNHGGRALDSANTP---------- 341 Query: 238 FQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLK- 292 L + +C + + G++ G D++K++ +GA GL L Sbjct: 342 --------MQVLLEIQKFCPQVLNQLEVFIDDGIKRGTDVVKALAMGAKAVGLGRAALYG 393 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V A++ L E +M LLG V +L Sbjct: 394 LAVGGEEGVHKALQILADETTTAMRLLGVSNVSDL 428 >gi|330925795|ref|XP_003301198.1| hypothetical protein PTT_12641 [Pyrenophora teres f. teres 0-1] gi|311324303|gb|EFQ90725.1| hypothetical protein PTT_12641 [Pyrenophora teres f. teres 0-1] Length = 514 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 111/372 (29%), Gaps = 94/372 (25%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN--- 78 N + L R + D S FLG + P+ +S M N + Sbjct: 142 NNSVYRSILLRPRVF--VDCTRCDTSTSFLGHSVKLPIYVSPAA-----MARLANADGEW 194 Query: 79 -LAIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN--- 122 +A A K A Q V + + ++L R + + N Sbjct: 195 GIAQACSKYGAMQIISQNASMTPEQIVADATPGQVFGWQLYVQNERPKSEAMLARMNKLD 254 Query: 123 -LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-LQEI--------------------- 159 + + L D V + G L + +QE Sbjct: 255 CIKFICLTLDAPVPGKREHDERSKNIGSNLPVRAAVQESQSVSKTSTSAQTPSSSTTTTT 314 Query: 160 -----------IQPNGNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 G + F + + L + ++P++LK + + D L Sbjct: 315 DADVNGKPKPKSMGVGQSLFWGTAADLTWRTTLPWLRTHTNLPIVLKGIQ---THEDAYL 371 Query: 203 --GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA- 259 ++ ++ GG + P +L R YC E Sbjct: 372 ASLHAPHVKAIILSNHGGRALDTAP------------------PAVHTLLEIRKYCPEVF 413 Query: 260 ---QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVS 315 + GG++ G D++K++ LGA G+ L + V +E L+ Sbjct: 414 DRVEVWVDGGIKRGTDVVKALCLGARGVGVGRAALFGLGAGGKEGVERVLEILKAGTETC 473 Query: 316 MFLLGTKRVQEL 327 M LLG +RV +L Sbjct: 474 MRLLGVERVDQL 485 >gi|293557112|ref|ZP_06675667.1| glycolate oxidase [Enterococcus faecium E1039] gi|291600733|gb|EFF31030.1| glycolate oxidase [Enterococcus faecium E1039] Length = 366 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 42 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 100 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 156 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 157 VEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 216 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 217 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 273 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 274 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 316 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 317 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 365 >gi|311106470|ref|YP_003979323.1| FMN-dependent dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] gi|310761159|gb|ADP16608.1| FMN-dependent dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] Length = 405 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 117/368 (31%), Gaps = 76/368 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F + R L + E G++ + P I+ M G + Sbjct: 53 AEDNQSLRGNRSAFAQYSFSPRVL--VDVSRRTQQTEIFGRRYASPFGIAPM-GISALSA 109 Query: 73 ERINRNLAIAAEKTKV-AMAVGSQRVMFS-----------------DHNAIKSF--ELRQ 112 R + LA AA + + A+ G+ + D I + R+ Sbjct: 110 YRGDIVLARAAREQGIPAILSGTSLIPMEEVIRAAPGTWFQAYLPGDPQRIDALVERARR 169 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + L H Sbjct: 170 AGYETLVLTVDIPVSANRENNVRTGFSTPLKPSLRLAWDGLTRPRWLAGTFMRTLLAHGM 229 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ + +F+ +A + S L++K + L D Sbjct: 230 PHFENSFATRGAPIVSASVLRDFSARDHLSWEHVARIRSQWPGTLIIKGI---LHPQDAA 286 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L + G ++ GG + +L Sbjct: 287 LARQHGADGIIVSNHGGRQLDGA------------------VSPLRALPGVVAAAGGMTV 328 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + G+R G D+LK++ LGAS + PF A +A V AI LR E +M +LG Sbjct: 329 MMDSGVRRGSDVLKALALGASFVFVGRPFNYAAAVGGEAGVSHAIGLLRAEIDRNMAMLG 388 Query: 321 TKRVQELY 328 ++E+ Sbjct: 389 INNLREMQ 396 >gi|299532504|ref|ZP_07045894.1| L-lactate dehydrogenase [Comamonas testosteroni S44] gi|298719451|gb|EFI60418.1| L-lactate dehydrogenase [Comamonas testosteroni S44] Length = 377 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 125/373 (33%), Gaps = 74/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L ++D S+E G+K S P+ ++ + G Sbjct: 29 AYAEKTLARNVDDLADVALRQRVLK--DMSQLDTSIELFGEKFSIPVALAPV-GLTGMFA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN 122 R A+AA+K + + S V + A + F+L R + + + + Sbjct: 86 RRGEVQAAMAADKKGIPFTMSSVSVCPIEEVAPRLGRPMWFQLYVLKDRGFMKNALERAQ 145 Query: 123 ---LGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNTNF 168 + + D V A + G + LQ + P G + Sbjct: 146 AAGVSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRY--LQAVTHPHWAVDVGLMGRPHT 203 Query: 169 AD-----------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGL 204 L + L + D + ++ L D + Sbjct: 204 LGNISTYKGQNVSLEDYMGYLGANFDPSISWSDLEWIRDFWKGPMLIKGILDPEDARDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + + +L +A + + +A Sbjct: 264 RFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQIKILA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+RNG+DI++ + LGA + F+ A + V + L KE V+M L K Sbjct: 306 DSGVRNGLDIVRLLALGADCTMIGRAFVYALAAEGEAGVTNLLNLLEKEMRVAMTLTSVK 365 Query: 323 RVQELYLNTALIR 335 +V E+ + L+R Sbjct: 366 KVSEI-TDDLLVR 377 >gi|15988269|pdb|1HUV|A Chain A, Crystal Structure Of A Soluble Mutant Of The Membrane- Associated (S)-Mandelate Dehydrogenase From Pseudomonas Putida At 2.15a Resolution gi|38492723|pdb|1P4C|A Chain A, High Resolution Structure Of Oxidized Active Mutant Of (S)- Mandelate Dehydrogenase gi|38492733|pdb|1P5B|A Chain A, High Resolution Structure Of Reduced Active Mutant Of (S)- Mandelate Dehydrogenase Length = 380 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 107/344 (31%), Gaps = 55/344 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ F W + L + E LGK+ S PLLI TG N + Sbjct: 31 AEDEYGVKHNRDVFQQWRFKPKRL--VDVSRRSLQAEVLGKRQSMPLLIGP-TGLNGALW 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 + + LA AA K + + + M + A + F+L L A+ Sbjct: 88 PKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIHREIAQGMVLKALH 147 Query: 128 LNYDFGVQKAHQAVHVLGADGL--------FLHLN---------------PLQEIIQPNG 164 Y V AV+ L FL L +Q + Sbjct: 148 TGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQ 207 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + L LL+K + LS+ D + + G ++ GG Sbjct: 208 MDASFNW-EALRWLRDLWPHKLLVKGL---LSAEDADRCIAEGADGVILSNHGGRQL--- 260 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 D I P+ + + G R G DI+K++ LGA Sbjct: 261 ---------------DCAIS-PMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAV 304 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L L A V + L+ + ++ +G + L Sbjct: 305 LLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSL 348 >gi|158634552|gb|ABW76126.1| lactate oxidase [Streptococcus iniae] gi|158634554|gb|ABW76127.1| lactate oxidase [Streptococcus iniae] gi|158634558|gb|ABW76129.1| lactate oxidase [Streptococcus iniae] gi|158634560|gb|ABW76130.1| lactate oxidase [Streptococcus iniae] gi|158634562|gb|ABW76131.1| lactate oxidase [Streptococcus iniae] gi|158634564|gb|ABW76132.1| lactate oxidase [Streptococcus iniae] Length = 390 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + F G KL+ P++++ + Sbjct: 52 AGDTFTLHENIRSFNHKLIVPHGLKG--VENPSTEITFDGDKLASPIILAPVA------A 103 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHNAIKS-------FELRQYAPHTV--- 118 ++ A V + S ++ F+ + Sbjct: 104 HKLANEQGEIASAKGVKEFGTIYTTSSYSTTDLPEISQTLGDSPHWFQFYYSKDDGINRH 163 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + PNG D Sbjct: 164 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PNGAGKTMDYVY 221 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 222 KATKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 278 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 279 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 321 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E + E + M L GT+ + + L N Sbjct: 322 VALGRPVIYGLAMGGSVGTRQVFEKINDELKMVMQLAGTQTIDDVKHFKLRHNPY 376 >gi|323445311|gb|EGB01985.1| hypothetical protein AURANDRAFT_35604 [Aureococcus anophagefferens] Length = 179 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 18/171 (10%) Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 N + A +A S +P++LK V CG D L K+G+ ++ GG + Sbjct: 26 NRDPALNWKDVAWFCSNTTIPIVLKGVQCG---EDAVLAAKAGVAAILVSNHGGRNMDTA 82 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 S + +I + + G+ ++ + GG+R G D++K++ LGA+ Sbjct: 83 RSSIEALPEIISMLTEAGL------------RSKLEVWLDGGIRRGSDVVKALALGANAC 130 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 G+ P + + + + +E L++E + +M L GT R L + +L+ Sbjct: 131 GIGKPAMYGMSCYGAAGITKCVEILKREMVQTMQLCGTPRFDLL--SPSLV 179 >gi|241765896|ref|ZP_04763828.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] gi|241364171|gb|EER59371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] Length = 379 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 121/377 (32%), Gaps = 82/377 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L +D S+E G+KLS P+ +S + TG + Sbjct: 29 AYAEQTLRRNVDDLAAVALRQRVLK--DMSRLDTSIELFGEKLSIPVALSPVGLTGMYRR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA++ + + S V + A K F+L + + L Sbjct: 87 RGEV---QAARAADQHGIPFTMSSVSVCPIEEVAPKLQRPMWFQLYVLKDRGFMQNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVHVLGADGLFLHLNPL-----QEIIQPN--------G 164 Q D V A A N Q + P G Sbjct: 144 AQAAGCTTLVFTVDMPVPGARYR----DAHSGMSGPNAALRRYWQAVTHPRWAVDVGLLG 199 Query: 165 NTN-----------FADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDI 200 + L + LS+ D + K++ L D Sbjct: 200 RPHDLGNISAYRGSPTGLEDYMGYLSANFDPSISWKDLEWIRAFWKGPMVIKGILDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+RNG+D++++I LGA + ++ A V +E L KE V+M L Sbjct: 302 KILADSGIRNGLDVVRAIALGADCAMIGRAYIYALAAAGEAGVKHLLELLEKEMRVAMTL 361 Query: 319 LGTKRVQELYLNTALIR 335 +V ++ L+R Sbjct: 362 TSVAKVGDI-TGDLLVR 377 >gi|254456202|ref|ZP_05069631.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] gi|207083204|gb|EDZ60630.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] Length = 383 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 22/167 (13%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + P LK V +S D + + G I+ GG S D Sbjct: 237 GWKDA-EYCAKKWNGPFALKGV---MSVEDAKKAIDIGCTAIMISNHGGRQLDGSRSPFD 292 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 I ++ + I GG+R G +LK++ GA+ Sbjct: 293 QVKAISD-----------------AVGDKLEIILDGGVRRGTHVLKALAAGATACSFGKM 335 Query: 290 FL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 FL A V ++++ E +M L+G K ++EL + + R Sbjct: 336 FLFSLAAGGQQGVEHLLQNMHDEINRNMVLMGCKNLKELNSSKLIYR 382 >gi|330813423|ref|YP_004357662.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063] gi|327486518|gb|AEA80923.1| L-lactate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063] Length = 382 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + P LK + +S D + + G I+ GG + D Sbjct: 238 WKHAEYAIKKWNGPFALKGI---MSVEDAKKAIDIGASAIMISNHGGRQLDGSRAPFDQL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + I GG++ G +LK++ LGA + +L Sbjct: 295 QTI-----------------VDAVGDKVEVILDGGVQRGTHVLKALALGAKACSIGKAYL 337 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V + LR E M L+G + V+EL N L R Sbjct: 338 YGLSAGGQVGVEQVVGKLRDEIQRGMTLMGCRSVKELTKNKVLFR 382 Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + + RN + F++ LI L +D S + LG+K+ FPL S Sbjct: 32 ADDEVTLKRNTEAFENCDLIPSVL--TDVSNIDLSTKVLGQKIKFPLFFSPTA 82 >gi|254670044|emb|CBA04858.1| L-lactate dehydrogenase [Neisseria meningitidis alpha153] Length = 390 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S GI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALP---------GI--------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|294891763|ref|XP_002773726.1| cytochrome b2, putative [Perkinsus marinus ATCC 50983] gi|239878930|gb|EER05542.1| cytochrome b2, putative [Perkinsus marinus ATCC 50983] Length = 308 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 97/321 (30%), Gaps = 67/321 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L+ R L + +VD S LG+ P ++++ M Sbjct: 27 AGDEFSYAENEDAFSRIALVPRVL--VDVSKVDCSSSVLGRHFDVPFYMTAVA-----MA 79 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + N + + A A +++ G + Sbjct: 80 KLYNVD-GEKCVARGIG----------KTKEAG-----IDMAYMIPTLASCGNGEFYGGL 123 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 KA + +H + + Sbjct: 124 K-DKADARGRRMDVFLKGIH---------------SRKWLK----YRAYWN--------A 155 Query: 193 CGLSSMDIEL---GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF--QDWGIPTPL 247 CGL+ + + GIR ++ G ++S + + W Sbjct: 156 CGLAVDAVRAYGERNQLGIRGIVVSNHGARQVDTVKSGVQMLYECTRALKKAGW------ 209 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIE 306 E GG+R G DI+K I LGAS G+ PF+ A +V Sbjct: 210 ----RGRIDPEFSVFVDGGVRRGTDIIKCIALGASAVGIGRPFMTAMAAFGEAGMVRLAA 265 Query: 307 SLRKEFIVSMFLLGTKRVQEL 327 L++E +V+M LLG + ++EL Sbjct: 266 LLKEEILVNMRLLGCRSLEEL 286 >gi|257880339|ref|ZP_05659992.1| L-lactate oxidase [Enterococcus faecium 1,230,933] gi|257882193|ref|ZP_05661846.1| L-lactate oxidase [Enterococcus faecium 1,231,502] gi|257885386|ref|ZP_05665039.1| L-lactate oxidase [Enterococcus faecium 1,231,501] gi|257890998|ref|ZP_05670651.1| L-lactate oxidase [Enterococcus faecium 1,231,410] gi|257894252|ref|ZP_05673905.1| L-lactate oxidase [Enterococcus faecium 1,231,408] gi|258614710|ref|ZP_05712480.1| L-lactate oxidase [Enterococcus faecium DO] gi|260562357|ref|ZP_05832871.1| s-2-hydroxy-acid oxidase [Enterococcus faecium C68] gi|293559850|ref|ZP_06676364.1| hydroxyacid oxidase 1 [Enterococcus faecium E1162] gi|293568370|ref|ZP_06679691.1| hydroxyacid oxidase 1 [Enterococcus faecium E1071] gi|294623147|ref|ZP_06702033.1| glycolate oxidase [Enterococcus faecium U0317] gi|314937975|ref|ZP_07845286.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133a04] gi|314944025|ref|ZP_07850710.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133C] gi|314948415|ref|ZP_07851803.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0082] gi|314951397|ref|ZP_07854449.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133A] gi|314991326|ref|ZP_07856805.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133B] gi|314995336|ref|ZP_07860442.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133a01] gi|257814567|gb|EEV43325.1| L-lactate oxidase [Enterococcus faecium 1,230,933] gi|257817851|gb|EEV45179.1| L-lactate oxidase [Enterococcus faecium 1,231,502] gi|257821242|gb|EEV48372.1| L-lactate oxidase [Enterococcus faecium 1,231,501] gi|257827358|gb|EEV53984.1| L-lactate oxidase [Enterococcus faecium 1,231,410] gi|257830631|gb|EEV57238.1| L-lactate oxidase [Enterococcus faecium 1,231,408] gi|260073281|gb|EEW61622.1| s-2-hydroxy-acid oxidase [Enterococcus faecium C68] gi|291588891|gb|EFF20718.1| hydroxyacid oxidase 1 [Enterococcus faecium E1071] gi|291597516|gb|EFF28681.1| glycolate oxidase [Enterococcus faecium U0317] gi|291606186|gb|EFF35606.1| hydroxyacid oxidase 1 [Enterococcus faecium E1162] gi|313590429|gb|EFR69274.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133a01] gi|313594099|gb|EFR72944.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133B] gi|313596455|gb|EFR75300.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133A] gi|313597370|gb|EFR76215.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133C] gi|313642650|gb|EFS07230.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0133a04] gi|313645140|gb|EFS09720.1| dehydrogenase, FMN-dependent [Enterococcus faecium TX0082] Length = 339 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 15 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 72 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 73 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 129 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 130 VEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 189 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 190 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 246 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 247 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 289 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 290 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 338 >gi|261209268|ref|ZP_05923660.1| s-2-hydroxy-acid oxidase [Enterococcus faecium TC 6] gi|260076814|gb|EEW64549.1| s-2-hydroxy-acid oxidase [Enterococcus faecium TC 6] Length = 372 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 48 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAVQGLAHEKG 105 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 106 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 162 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 163 VEAGAKAIILTAASTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 222 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 223 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 279 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 280 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 322 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 323 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 371 >gi|328675863|gb|AEB28538.1| L-lactate dehydrogenase [Francisella cf. novicida 3523] Length = 382 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 123/361 (34%), Gaps = 72/361 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + S ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDCSHRN--QAIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISNLG 124 LA AAEK +A MA+ S + ++ N F++ R + + + + Sbjct: 91 GEIALAQAAEKLGIAYTMSTMAICSLETVRNEVNNPFWFQVYLMKDRGFTKSLLERAKVS 150 Query: 125 ---AVQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQP---NGNTNFAD 170 + +N D V + + + +++ Q + N F + Sbjct: 151 GCKTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDLINIITKQNWNWGYLLSKNKQFGN 209 Query: 171 LSSKIAL-----------LSSAMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 LSS I + S D + K++ L++ E +K Sbjct: 210 LSSHIPTGAKGMKSVIDFMDSQFDQSVTWKDIEWLRSIWDGNLVIKGLLNTQCAENAVKI 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASG 265 G ++ GG + +PT +L +A + I Sbjct: 270 GADGIVVSNHGGRQLDGV------------------LPTIEALPAIAEKVKGNTKIILDS 311 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D++K++ LGA + PFL V + ++KE +M L G + Sbjct: 312 GIRSGQDVIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDIIKKEIDNTMALAGISNL 371 Query: 325 Q 325 Sbjct: 372 N 372 >gi|126640182|ref|YP_001083166.1| L-lactate dehydrogenase FMN linked [Acinetobacter baumannii ATCC 17978] Length = 329 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 34/186 (18%) Query: 162 PNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + D P+++K + L D + ++ G Sbjct: 160 PTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDAKDAVRFGADGI 216 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 217 VVSNHGGRQLDGV------------------MSSARALPAIADAVKGDLAILADSGIRNG 258 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ + LGA L F+ A V ++ + KE V+M L G K + ++ Sbjct: 259 LDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDI-N 317 Query: 330 NTALIR 335 L++ Sbjct: 318 ADCLVQ 323 >gi|242809218|ref|XP_002485323.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218715948|gb|EED15370.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 401 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 116/359 (32%), Gaps = 67/359 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N+ F W LI + L EVD S+E G+K S P+L++ + G + Sbjct: 52 AGEKATMDSNRLAFRQWKLIPKML---RTTEVDTSIELFGEKYSHPVLMAPI--GVQALA 106 Query: 73 ERINRN-LAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFELRQYAPHTVLISNLGA 125 R LA A + V + + F D + K ++L + + IS L Sbjct: 107 HRDKETGLAEACSEVDVPYILSTASGSSFEDIAASCGDVPKWYQLYWPNDNDITISLLKR 166 Query: 126 VQ----LNYDFGVQKAHQAVHVLGADGLFLHL-----------NPLQEI---------IQ 161 + + A D +L +P+ ++ Sbjct: 167 AKENGYKALVVTLDTWTLAWRPADLDTGYLPFLAGIGTEFGLTDPVFRAKFEADTGSKVE 226 Query: 162 PNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I A L D PL+LK + D LK G Sbjct: 227 DEPLGAARAWLQSIFGVNHTWEDVAFLRKNWDGPLILKGIQH---VDDARTALKYGCDGI 283 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG ++ +I + + G+R G Sbjct: 284 VVSNHGGRQLDGAIGSLEVLPEI-----------------VDAVGKDMTVLFDSGIRTGS 326 Query: 272 DILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 DI+K+I LGA + P + ++ + ++ L +F +SM + G + + + Sbjct: 327 DIVKAIALGAKAVFVGRPVMYGYGINGKEGAKEVLQGLLADFYLSMAIAGIPSIADCHR 385 >gi|299115220|emb|CBN74053.1| Glycolate Oxidase [Ectocarpus siliculosus] Length = 394 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 106/336 (31%), Gaps = 63/336 (18%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ--RV 97 VD S LG+K+S P+ I+ +M A A+ S Sbjct: 77 DVSMVDTSTSVLGQKISSPICIAPTA--MQRMAHDSGECATAGAAAKAGALMTLSSWSTT 134 Query: 98 MFSD------HNAIKSFELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAVHV 143 D + F+L Y + L + A+ + D V + + Sbjct: 135 SLEDVAKAGGPGGARWFQLYVYKDRKITEQLVKRALAAGYTALAVTVDTPV-LGRREADM 193 Query: 144 LGADGLFLHL---NPLQEIIQPNGNTNFADLSSKIALLSSAM------------------ 182 L HL N + T S +A +++ Sbjct: 194 RNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICG 253 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +++K V +++ D ++ G+ ++ G + ++ ++ Sbjct: 254 SMKIVVKGV---MTAEDAAESVRQGVDGIWVSNHGARQLDTTPATIEVLPEV-------- 302 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAV 301 + GG+ G D+ K++ LGA + P L A + V Sbjct: 303 ---------VAAVSGRCEIYLDGGICRGTDVFKALALGAKAVFIGRPVLWGLAHSGEEGV 353 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 ++ L E ++++ L G RV + +++ HQ Sbjct: 354 SKVLKLLHDELVMALQLTGCTRVSS--ASRSMVTHQ 387 >gi|289566017|ref|ZP_06446455.1| lactate 2-monooxygenase [Enterococcus faecium D344SRF] gi|294616179|ref|ZP_06695976.1| hydroxyacid oxidase 1 [Enterococcus faecium E1636] gi|289162215|gb|EFD10077.1| lactate 2-monooxygenase [Enterococcus faecium D344SRF] gi|291590934|gb|EFF22646.1| hydroxyacid oxidase 1 [Enterococcus faecium E1636] Length = 366 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 55/349 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 42 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAVQGLAHEKG 99 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 100 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 156 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 157 VEAGAKAIILTAASTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 216 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 217 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 273 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 274 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 316 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + P + + ++ V + E L KE ++M L GTK + E+ + Sbjct: 317 IGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLM 365 >gi|326483332|gb|EGE07342.1| cytochrome b2 [Trichophyton equinum CBS 127.97] Length = 383 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 119/360 (33%), Gaps = 72/360 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-LA 80 N + L R + + LG KL+ P++ S ++ +A Sbjct: 33 NNSIYRSILLRPRVF--VDCKNCSLATSMLGYKLNTPIIASPTA--MARLAHPSGEAGIA 88 Query: 81 IAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL------RQYAPHTVLISNLGAVQ 127 A K A + V + + + ++L ++ I+ + A++ Sbjct: 89 AACAKFGAMQIISNNASMTPEEIVKGAPPDQVFGWQLYVQIERKKSEAMLARINKIKAIK 148 Query: 128 ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-------------- 170 L D V + + +I++ +G A Sbjct: 149 FICLTLDAPVPGKRELDERTKTIAA---TPAVADIVKSSGGHEIAGGSGLGQQLFAGTDP 205 Query: 171 ---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL--GLKSGIRYFDIAGRGGTSWSRIE 225 + L D+P++LK + + D L I+ ++ GG + Sbjct: 206 SLTWKDTLPWLLKHTDLPIVLKGIQ---THEDAYLASLHTPQIKAIILSNHGGRAMDTAP 262 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGA 281 P+ +L R YC E + GG++ G D++K++ LGA Sbjct: 263 ------------------PSIHTLMEIRKYCPEVFNRIEVWIDGGVKRGTDVVKALCLGA 304 Query: 282 SLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 G+ L A + V +E L E + +M LLG +V++L ++N + Q Sbjct: 305 KGVGVGRNALFSLAAGGPEGVERMLEILCAETMTAMRLLGVDKVEDLGMQHINARAVEQQ 364 >gi|152986454|ref|YP_001350813.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PA7] gi|166990707|sp|A6VCM8|LLDD_PSEA7 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|150961612|gb|ABR83637.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PA7] Length = 381 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 34/187 (18%) Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + + P+++K + L D + +K G Sbjct: 213 NPTGLEDYIGWLGANFDPSISWKDLEWIREFWNGPMVIKGI---LDPEDAKDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A E +A G+R Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELAILADSGIRT 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA L F+ A V +E + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEI- 370 Query: 329 LNTALIR 335 +L+R Sbjct: 371 SADSLVR 377 >gi|320586339|gb|EFW99018.1| L-lactate dehydrogenase [Grosmannia clavigera kw1407] Length = 419 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 60/166 (36%), Gaps = 27/166 (16%) Query: 171 LSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +A + + P+++K + S D + G+ ++ GG Sbjct: 261 VWEDLAWIRARWGSRPIIVKGIQ---SVEDAVEATRHGVDGIYLSNHGGRQLDYAP---- 313 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGG 285 +L R E + GG+ G D++K++ LGAS G Sbjct: 314 --------------SAVQTLLDIRRLHPELLAKTKIYLDGGVTRGSDVVKALCLGASGVG 359 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + FL +D V+ AI L E +M LLG + +L N Sbjct: 360 IGRGFLFALSAYGTDGVIKAISILSDEIQTTMRLLGVNDISQLNNN 405 >gi|225680206|gb|EEH18490.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 430 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 100/326 (30%), Gaps = 79/326 (24%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--NR 77 D NK FFD R L + V+ + + LG S PL +S M + I + Sbjct: 148 DANKSFFDRTWFRPRVLRK--VRNVNTNTKILGCDSSMPLFVSPAA-----MAKLIHPDG 200 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 LAIA R + + S+ ++ +N +A Sbjct: 201 ELAIARACE--------SRFIIQGISNSASYSMKDITAAGPQ-AN---YFFQLYVNKDRA 248 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 A H+ G P F + + Sbjct: 249 KSAAHLHECSG------------NPRIRAVF------------------ITVDAAWPGKR 278 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 E +G+ ++ GG + P L+L C Sbjct: 279 EADER---AGLNGILLSNHGGRNLDTSP------------------PALLTLLELHKRCP 317 Query: 258 EA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFI 313 E + GG+R G DILK++ LGA+ G+ L + V + ++ E Sbjct: 318 EIFDKMEIYLDGGIRRGSDILKAVCLGATAVGMGRSVLYATNYGQEGVEHLFDIMKDELE 377 Query: 314 VSMFLLGTKRVQELY---LNTALIRH 336 +M L+G + E +NTA I H Sbjct: 378 GAMRLVGITSLDEARPELVNTADIDH 403 >gi|254372948|ref|ZP_04988437.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida GA99-3549] gi|151570675|gb|EDN36329.1| L-lactate dehydrogenase [Francisella novicida GA99-3549] Length = 380 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 123/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKVRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEVNNPFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQP----------- 162 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 163 ------------NGNTNFADL-------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 T+F DL I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDLQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L +A + + I Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V E L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYEILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 SDLN 372 >gi|332638635|ref|ZP_08417498.1| L-lactate oxidase [Weissella cibaria KACC 11862] Length = 368 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 116/359 (32%), Gaps = 76/359 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNKMI 72 + + N++ F + LI R L +I D S L+ P++ + + G ++ Sbjct: 42 DEQVLRDNEQAFRHYQLIPRMLQDI--AAPDLSTTLFDIPLTMPVIAAPIAAHGLMHQDG 99 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNY 130 E++ VG+ +FS S ++ AP T L + + Sbjct: 100 EQVTVK------------GVGAAGSIFSLSTYGNSRIADVASAAPDTPKFFQL-YMSRDD 146 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNP-LQEIIQPNGNTNFADLS--SKIALLSSAMD---- 183 DF +AV+ G + L + L + + NF +A S+A Sbjct: 147 DFNQYLLDEAVNN-GYKAIILTADATLGGYREADIINNFTFPLPMENLAAFSNAAGSGEG 205 Query: 184 ----------------------------VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +P+++K + D + +G ++ Sbjct: 206 LGIADIYARAKQDLSLRDINKVKEMAHGLPVIVKGIQ---DPDDALAAIAAGADGIWVSN 262 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + I T ++ A+ I G+R G D+ K Sbjct: 263 HGGRELNGAPAS---------------IDTLAAI--AKAVNRRVPVIFDSGIRRGEDVAK 305 Query: 276 SIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ LGA + L P L A V + E L E M L G V EL + Sbjct: 306 ALALGADVVALGRPMLWGLNQGGAAGVQSVYEHLATELRSVMQLTGAHTVAELQRAKII 364 >gi|208779382|ref|ZP_03246728.1| L-lactate dehydrogenase [Francisella novicida FTG] gi|208745182|gb|EDZ91480.1| L-lactate dehydrogenase [Francisella novicida FTG] Length = 380 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKVRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEVNNPFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + + I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTNFMDSQFDQSITWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L +A + + I Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V E L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYEILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 SDLN 372 >gi|162455953|ref|YP_001618320.1| (S)-2-hydroxy-acid oxidase [Sorangium cellulosum 'So ce 56'] gi|161166535|emb|CAN97840.1| (S)-2-hydroxy-acid oxidase [Sorangium cellulosum 'So ce 56'] Length = 367 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 118/356 (33%), Gaps = 60/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F + +R L + E D S LG ++ FP+L++ + + Sbjct: 36 ADEGRTLRENRRAFRRLEIHYRVL--VDVAERDMSTTVLGTRVPFPILVAPTA---YQRL 90 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL-- 123 + +A AA + + + + A S F+L + + + + Sbjct: 91 AHPDGEIASSRAASELGTIFTLSTLSTTSLEAVAGASPGPKWFQLYVHKDRGLTRALVER 150 Query: 124 ------GAVQLNYDFGVQKAHQAVHVLGADGLFLHL---------------NPLQEIIQP 162 A+ L D V + V L L + Sbjct: 151 AESSGYRALMLTVDTPV-LGRRIADVRNGFALPEGLVMANLADAATAAPAEERGSLLASY 209 Query: 163 NGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + A L+ + + L+S +PLLLK + + D L++G ++ G Sbjct: 210 VATRHDASLTWRDVGWLASLTRLPLLLKGI---VRPDDALRALEAGAAGVVVSNHGARQL 266 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + I + GG+R G D+LK+I LGA Sbjct: 267 DGAPATIEALPAIAD-----------------AVAGRCLVLMDGGIRWGTDVLKAIALGA 309 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + P L A + V + LR E ++M L G + + + LIR Sbjct: 310 RAVLIGRPVLWGLAALGGEGVARVLAGLRDELSIAMALAGCPTLASI--DRDLIRR 363 >gi|325919389|ref|ZP_08181417.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325550130|gb|EGD20956.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 376 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 116/371 (31%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 19 AYAEHTLRRNVADLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 76 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 77 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 130 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 131 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGTNAALRRMLQAVTHPRWAWDVGLLGK 190 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 191 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSISWKDLEWIREFWTGPMVIKGI---LDPD 247 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 248 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 289 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ + LGA L F+ A V + + +E V+M Sbjct: 290 QLKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAM 349 Query: 317 FLLGTKRVQEL 327 L GT+ + E+ Sbjct: 350 TLTGTRSITEI 360 >gi|295395339|ref|ZP_06805540.1| L-lactate dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] gi|294971798|gb|EFG47672.1| L-lactate dehydrogenase [Brevibacterium mcbrellneri ATCC 49030] Length = 409 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 114/369 (30%), Gaps = 72/369 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F + L +VD S G + P+ I+ TG M Sbjct: 59 AQDEYTYRGNREAFRNLEFDPAILAGS--ADVDLSTTIAGVESRLPVGIAP-TGFTRMMH 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFEL-----RQYAPHTVLIS 121 A++ V + + D NA K F+L R + + + Sbjct: 116 TEGEVAGVRTADRFGVPFTLSTMGTRSIEDVAACAPNATKWFQLYLWRDRDASQDLLERA 175 Query: 122 -----------------NLGAVQLNYDFGVQKAHQAVHVLGADGL------FLHLNPLQE 158 + + + A VL A FL +PL Sbjct: 176 WKNGFETLLVTVDTTVAGRRLRDVRHGLTIPPKLSAGTVLDASYRPEWWFNFLTTDPLTY 235 Query: 159 IIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 N ++ A L + + S L +K V L+ +D +G Sbjct: 236 ASLSNEVSDLASLTSSMFDPTLSFEDLKWIRSVWPGKLFVKGV---LTEVDASKSFDAGA 292 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGL 267 ++ GG R T +L + R + I G+ Sbjct: 293 DGLVVSNHGGRQLDRAPI------------------TLEALPVVREAVGEDVPIILDSGI 334 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 G DI+ ++ LGA + +L M + +A V E L E V+M L+G + + Sbjct: 335 MRGQDIIGALALGADFTLIGRAYLYGLMAAGEAGVRKVFEILENEMTVTMQLMGAGSISD 394 Query: 327 LYLNTALIR 335 L N ++R Sbjct: 395 L--NPDMVR 401 >gi|213405165|ref|XP_002173354.1| lactate 2-monooxygenase [Schizosaccharomyces japonicus yFS275] gi|212001401|gb|EEB07061.1| lactate 2-monooxygenase [Schizosaccharomyces japonicus yFS275] Length = 405 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 122/366 (33%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM 71 ++ RN + I L P+ S +E G K P+L++ + G ++ Sbjct: 63 AGRESTERRNTEALGRVRFIPHMLTPKASTRN--LEIELFGVKYPTPILVAPI--GVQRL 118 Query: 72 IERINR-NLAIAAEKTK---------------VAMAVGS-----QRVMFSDHNA------ 104 A AA K VA A G Q D N Sbjct: 119 YHSEGEVAAARAASKLGIPYIMSSASSSSMEQVAQASGDGPRWFQLYWPEDPNVTVSMLE 178 Query: 105 -------------IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL 151 + ++ L + P + + + D + + + L Sbjct: 179 AATAAGFRTLVVTLDTWNL-SWRPRDLKNAYVPFYHGVGDQVCNSTEAFLDKMRSLNLSP 237 Query: 152 HLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 NP +E+ + F +I LL P++LK + D + ++ G+ Sbjct: 238 KSNP-REVGKHWVKHIFPGSQHGWDEINLLRRHWKGPIILKGIQH---VDDAKKAVEYGL 293 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGL 267 ++ GG + GI + +LE + ++ + G+ Sbjct: 294 DGIIVSNHGGRQFDG------------------GIGSIEALEPIVDAVGDKLTVLFDSGV 335 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R+GVD+++++ LGA + PFL + +D VV + + + ++M L G ++E Sbjct: 336 RSGVDVMRALALGAKAVLIGRPFLWGLSLAGTDGVVHVLRCIMADLDLNMGLAGYHSIKE 395 Query: 327 LYLNTA 332 L Sbjct: 396 LTKKDV 401 >gi|332969369|gb|EGK08394.1| L-lactate dehydrogenase [Kingella kingae ATCC 23330] Length = 391 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 119/363 (32%), Gaps = 77/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N FD + L + + + + +G+ + P ++ TG G + Sbjct: 37 ETTYRANSSDFDAIKFRQKVL--VDMEGRSLATKLIGQDVVMPTALAP-TGLTGMQRADG 93 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLIS-- 121 I A AAEK V + + + + + +A F+L R++ + + + Sbjct: 94 EILA--AKAAEKFGVPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMQNLIKRAHD 151 Query: 122 -NLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFAD 170 N A+ L D + Q+ + L A LN L ++P F + Sbjct: 152 ANCSALVLTADLQILGQRHKDIKNGLSAPPKPTLLNLLNLAMKPEWCWHMLHTQRRTFRN 211 Query: 171 L--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + +A + L++K + + + D Sbjct: 212 IVGHAKNVQDVSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MDAEDAIKAA 268 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G ++ GG S DI + ++ + Sbjct: 269 EHGADAIVVSNHGGRQLDGALSSIHALPDI-----------------VQAAGSQTEVWLD 311 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+ +G DILK+ LGA + FL D V +E L KE VSM L G + Sbjct: 312 GGITSGQDILKAWALGAKGTMIGRAFLYGLGAYGEDGVRRVLEILYKEMDVSMALAGYRN 371 Query: 324 VQE 326 + + Sbjct: 372 LHD 374 >gi|296391598|ref|ZP_06881073.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PAb1] gi|313109753|ref|ZP_07795693.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 39016] gi|310882195|gb|EFQ40789.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 39016] Length = 381 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 34/187 (18%) Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + D P+++K + L D +K G Sbjct: 213 NPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A E +A G+R Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELAILADSGIRT 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA L F+ A V +E + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEI- 370 Query: 329 LNTALIR 335 +L+R Sbjct: 371 SADSLVR 377 >gi|254283384|ref|ZP_04958352.1| hypothetical protein NOR51B_1884 [gamma proteobacterium NOR51-B] gi|219679587|gb|EED35936.1| hypothetical protein NOR51B_1884 [gamma proteobacterium NOR51-B] Length = 188 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 A L+ D P ++K + + D ++ G ++ GG + D Sbjct: 39 WDDAAWLADQWDGPFVIKGMS---TPEDARRAVEIGASAVMLSNHGGRQLETAPAPVDCL 95 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + I ++ + I GG+R G ++K++ LGA+ + P+L Sbjct: 96 APIRD-----------------AVGDQLELIVDGGIRRGTHVIKALALGANACSIGRPYL 138 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A V A+ LR+E M LLG + V EL Sbjct: 139 YGLGAGGEAGVAHALSLLREEVERGMALLGCRSVAEL 175 >gi|90425590|ref|YP_533960.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisB18] gi|90107604|gb|ABD89641.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisB18] Length = 379 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 121/364 (33%), Gaps = 74/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ F D R L + E D S + +G++ + PL+++ + G Sbjct: 32 AEETLRANRADFQDIKFRQRIL--VDISERDLSTDIIGERAALPLILAPV-GSTGMQYGD 88 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL------ 123 + AA+ + M++ S + ++ F+L + + + Sbjct: 89 GEIHACRAAQTAGIPYTLSTMSICSIEDVAANVEQPFWFQLYVMRDRGFVKALIERAIAA 148 Query: 124 --GAVQLNYDFGV---------------QKAHQAVHVLGADG------------------ 148 A+ L D V + + +++ Sbjct: 149 KCSALVLTVDLQVIGQRHQDIKNGMSVPPEIFRLKNIIDIATKPRWVKGILAGKSRNFGN 208 Query: 149 LFLHLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + HL +++ + + I + S L++K + L D L + Sbjct: 209 IAGHLPGSKDLGSVSAWVASQFDPSLSWRDIDWIRSIWPGKLIIKGI---LDVEDAALAV 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K+G ++ GG S ++ D+ ++ + + Sbjct: 266 KAGAEALVVSNHGGRQLDGAPSSIEVLPDV-----------------VDAVGDQIEVMFD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+++++ LGA + ++ V AI+ ++ E +M L G Sbjct: 309 GGIRSGQDVMRALALGARSCMIGRAYIYGLGAFGGPGVAKAIDIIKNELSTTMALCGVNS 368 Query: 324 VQEL 327 + E+ Sbjct: 369 IDEI 372 >gi|251781881|ref|YP_002996183.1| putative lactate oxidase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390510|dbj|BAH80969.1| putative lactate oxidase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126694|gb|ADX23991.1| L-lactate oxidase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 393 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 105/347 (30%), Gaps = 60/347 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L D + F G +LS P++++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHGLKG--VDNPSTEITFDGDRLSSPIIMAPVA------A 106 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A V+ + S A F+ + Sbjct: 107 HKLANEQGEVASAKGVSEFGTIYTTSSYSTTDLPEITTALNGAPHWFQFYYSKDDGINRH 166 Query: 119 LISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L ++ L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRLKEQGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G I K+I GA L Sbjct: 282 GPAAFDSLQEVAET-----------------VDKRVPIVFDSGVRRGQHIFKAIASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L P + AM S E L E + M L GT+ V+++ Sbjct: 325 VALGRPVIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTVEDIRN 371 >gi|114330395|ref|YP_746617.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrosomonas eutropha C91] gi|114307409|gb|ABI58652.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nitrosomonas eutropha C91] Length = 365 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 116/348 (33%), Gaps = 53/348 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N FD HLI R L ++ + G+ L+ P++++ + Sbjct: 43 NNVSLQANPHAFDSIHLIPRPLSDVRSGH--TKITLFGQTLAHPVILAPLAYQQLYHPHG 100 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSD----HNAIKSFEL-----RQYAPHTV---LISN 122 + + A+ + + D F+L R+ + + + Sbjct: 101 ESASAMAASAQEGQSCVSSLASQTLEDIISAAGQPLWFQLYWQENRERTLKLLQRTIAAG 160 Query: 123 LGAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL------SSKI 175 A+ D V++A Q + L L + P + F + Sbjct: 161 YNAIIFTVDAPVKQATIQLPTTIQPINLDLPAPFP--ALLPQQSQVFNGWMAQAPRWEDL 218 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 A L +PLL+K + L S D E + G ++ GG Sbjct: 219 AWLRDQTSLPLLVKGI---LHSEDAEKVINLGCDGLVVSNHGGRVLDG------------ 263 Query: 236 IVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 TP SL + + + G+RNG DI K++ LGA + P Sbjct: 264 ---------TPASLACLPPIVSAISGRGKVLFDSGIRNGRDIYKALALGADAVMVGRPYI 314 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI-RHQ 337 A + V I LR E ++M L GT +QE+ I R+Q Sbjct: 315 WGLATAGALGVAHIIRLLRDELELTMALTGTASIQEITQEKIQISRNQ 362 >gi|88799084|ref|ZP_01114664.1| L-lactate dehydrogenase [Reinekea sp. MED297] gi|88778067|gb|EAR09262.1| L-lactate dehydrogenase [Reinekea sp. MED297] Length = 380 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 115/371 (30%), Gaps = 79/371 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N+ F L R + ++ +G+ S P+ ++ TG Sbjct: 32 ESTYRANESDFQSIKLRQRV--AVDMTNRSTAMPMVGQPTSMPVALAP-TGLTGMQCADG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLIS-NLG 124 A AAEK V + + + + A F+L +++A + + + N G Sbjct: 89 EIKAARAAEKAGVPFTLSTMSICSIEDVAEHTQAPFWFQLYVMKDKEFAQNLIDRARNAG 148 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI--------------IQPNGNTN-FA 169 L +Q Q + L NPL+ + + F Sbjct: 149 CSALVLTLDLQILGQRHKDIRN---GLSTNPLKSLKGWSHILTRPRWCLGMAGTKRHSFR 205 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + L+LK + L D +L Sbjct: 206 NIVGHAKGVTDVDSLFSWTAEQFDPQLSWDDVQWIKERWGGKLILKGI---LDVEDAKLA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + SG ++ GG S I ++ + Sbjct: 263 VASGADAIIVSNHGGRQLDGAPSSISQLKAI-----------------VDAVGDQIEVHM 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+I LGA + PFL V A+E + KE ++M G + Sbjct: 306 DGGIRSGQDVLKAIALGAKGTYIGRPFLYGLGAQGETGVSKALEIIHKELDLTMAFCGER 365 Query: 323 RVQELYLNTAL 333 + + N L Sbjct: 366 ELTRINRNHLL 376 >gi|238023660|ref|YP_002907892.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] gi|237878325|gb|ACR30657.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia glumae BGR1] Length = 372 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 122/342 (35%), Gaps = 68/342 (19%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA- 80 N + F L+ RAL +++ S E G L++P+L++ + + LA Sbjct: 55 NHEAFTRMKLLPRALADLAGA--SASSELFGTPLAYPILLAPTA---YHRLVHPDGELAT 109 Query: 81 -IAAEKTKVAMAVGSQRVMFSD-----------------HNAIKSFELRQYAPHTVLISN 122 AA T+ M V +Q + + + L + A + Sbjct: 110 VEAASLTRTWMTVSAQASVPLEAIAQRASSPLWLQLYWLPRRDDTLTLVRRAEQAGYRAI 169 Query: 123 L--------GAVQ------LNYDFGVQKAHQAVHVLGADGLFLHLNPL--QEIIQPNGNT 166 + GA GV + A L + +P+ Q G Sbjct: 170 VVTLDAVVSGARNVEQRAGFRLPHGVSAVNLAACALPPPAVARTGSPVFSQ---MLGGAP 226 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + D IA L+ +P+LLK V L+ D++ L +G ++ GG + + + Sbjct: 227 TWPD----IAWLAERSVLPILLKGV---LNPADVQQALSAGAAGLIVSNHGGRTLDTLPA 279 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + + + GG+R G D++K++ LGAS + Sbjct: 280 ALEALPGVAS-----------------AVAGRVPVLLDGGIRRGTDVVKALALGASAVLI 322 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P + A+ V + L+ EF +M L+G R++++ Sbjct: 323 GQPVVHALAVGGMRGVAHMLTILQTEFEAAMALVGRARIRDI 364 >gi|15599965|ref|NP_253459.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107103868|ref|ZP_01367786.1| hypothetical protein PaerPA_01004939 [Pseudomonas aeruginosa PACS2] gi|218893866|ref|YP_002442735.1| L-lactate dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254238495|ref|ZP_04931818.1| L-lactate dehydrogenase [Pseudomonas aeruginosa C3719] gi|254244328|ref|ZP_04937650.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 2192] gi|81856972|sp|Q9HV37|LLDD_PSEAE RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494986|sp|B7V1I3|LLDD_PSEA8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|9951035|gb|AAG08157.1|AE004890_10 L-lactate dehydrogenase [Pseudomonas aeruginosa PAO1] gi|126170426|gb|EAZ55937.1| L-lactate dehydrogenase [Pseudomonas aeruginosa C3719] gi|126197706|gb|EAZ61769.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 2192] gi|218774094|emb|CAW29910.1| L-lactate dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 381 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 34/187 (18%) Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + D P+++K + L D +K G Sbjct: 213 NPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A E +A G+R Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELAILADSGIRT 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA L F+ A V +E + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEI- 370 Query: 329 LNTALIR 335 +L+R Sbjct: 371 SADSLVR 377 >gi|332286857|ref|YP_004418768.1| L-lactate cytochrome c reductase [Pusillimonas sp. T7-7] gi|330430810|gb|AEC22144.1| L-lactate cytochrome c reductase [Pusillimonas sp. T7-7] Length = 396 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 124/383 (32%), Gaps = 92/383 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+D+ L+ R L +S +E G+ S P IS + G Sbjct: 39 ADDEVSLAHNRTAFNDYLLLPRMLEGVSAR--SQQIELFGQAYSSPFGISPVGLGAMYAY 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + LA AA + + + S + I E+ + AP+T + + D Sbjct: 97 RG-DIVLANAAARANIP-------AILSGASLIPMEEVARQAPNTWFQAYMPGDVDRVDA 148 Query: 133 GVQKAHQA--VHVLGADGLFLHLNPL-------------------QEIIQPN-------- 163 + + A ++ L + +NP Q + P Sbjct: 149 LLARIKAAGFKTLVVTVDLPVSVNPENYIRNGFSSPLRPSVQLAWQGLSHPRWLLGTFGR 208 Query: 164 -----GNTNFADL------------------------SSKIALLSSAMDVPLLLKEVGCG 194 G +F + + + D L++K + Sbjct: 209 TLLQHGMPHFENWRAERGAPILSSRVEKDFQARDHFNWGHVRQVRDRWDGKLIVKGL--- 265 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + D L +G+ ++ GG S + L Sbjct: 266 VRWQDAVLARDAGVDGIIVSNHGGRQMDGAVSPLHV------------------LPEIVK 307 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFI 313 + + G+R G D++K++ LGA PF ++ + V AI L+ E Sbjct: 308 AVPDVVVMMDSGVRRGSDVIKALSLGARCVFAGRPFNYASSVAGAAGVDHAIRILQTELH 367 Query: 314 VSMFLLGTKRVQELYLNTALIRH 336 +M LLG R++EL + ++RH Sbjct: 368 RNMALLGLNRLEEL--DDTMVRH 388 >gi|322411224|gb|EFY02132.1| L-lactate oxidase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 393 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 105/347 (30%), Gaps = 60/347 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L D + F G +LS P++++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHGLKG--VDNPSTEITFDGDRLSSPIIMAPVA------A 106 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A V+ + S A F+ + Sbjct: 107 HKLANEQGEVASAKGVSEFGTIYTTSSYSTTDLPEITTALNGAPHWFQFYYSKDDGINRH 166 Query: 119 LISNLG-----AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L ++ L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRLKEQGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K+I GA L Sbjct: 282 GPAAFDSLQEVAET-----------------VDKRVPIVFDSGVRRGQHVFKAIASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L P + AM S E L E + M L GT+ V+++ Sbjct: 325 VALGRPIIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTVEDIRN 371 >gi|49088724|gb|AAT51599.1| PA4771 [synthetic construct] Length = 382 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 34/187 (18%) Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + D P+++K + L D +K G Sbjct: 213 NPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A E +A G+R Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELAILADSGIRT 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA L F+ A V +E + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEI- 370 Query: 329 LNTALIR 335 +L+R Sbjct: 371 SADSLVR 377 >gi|163854584|ref|YP_001628882.1| L-lactate dehydrogenase [Bordetella petrii DSM 12804] gi|163258312|emb|CAP40611.1| L-lactate dehydrogenase [Bordetella petrii] Length = 404 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 67/370 (18%), Positives = 117/370 (31%), Gaps = 76/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 V N++ F + R L ++S D VE G++ + P+ I+ M G Sbjct: 53 VEDRQAERDNRQAFSRYGFRTRVLVDVSSRRQD--VELFGQRYASPVGIAPM-GIAALTA 109 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNLGA 125 R + LA AA+ V + GS + + +++ + LI + A Sbjct: 110 YRGDIVLARAAQAANVPCIMSGSSLIRLEEVMDAAPGTWFQAYLPGDDSHIGALIDRVAA 169 Query: 126 VQL-NYDFGVQKAHQAVHVLGADG-LFLHLNPL-----QEIIQPN-------------GN 165 + V QA L P Q + P G Sbjct: 170 AGVQTLVLTVDTPVQANRENNVRAGFSTPLKPGLGLAYQGLSHPRWLLGTFLRTLVRHGM 229 Query: 166 TNF----------------------ADLSSKI--ALLSSAMDVPLLLKEVGCGLSSMDIE 201 +F + A + P+++K + L + D Sbjct: 230 PHFENNYATRGAPILSKRVLRDFSDRGYLNWTHAAQIRRRWQGPMVIKGI---LGTDDAR 286 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G+ ++ GG S + +I Sbjct: 287 RAREQGMDGIIVSNHGGRQLDGAVSPLRVLPEILE------------------QAGGMTV 328 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G D +K++ LGA + PF A + D V A++ +R E +M +LG Sbjct: 329 MLDSGVRRGTDAMKALALGAHAVFVGRPFNYAASVAGEDGVRHALQLMRDEIARNMGMLG 388 Query: 321 TKRVQELYLN 330 R+QEL + Sbjct: 389 ITRLQELDRS 398 >gi|325924572|ref|ZP_08186086.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas gardneri ATCC 19865] gi|325544950|gb|EGD16290.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas gardneri ATCC 19865] Length = 386 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 116/371 (31%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVADLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGTNAALRRMLQAVTHPRWAWDVGLLGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSISWKDLEWIREFWTGPMVIKGI---LDPD 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 258 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSM 316 + + +A G+R+G+D+++ + LGA L F+ A V + + +E V+M Sbjct: 300 QLKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAM 359 Query: 317 FLLGTKRVQEL 327 L GT+ + E+ Sbjct: 360 TLTGTRSITEI 370 >gi|325293675|ref|YP_004279539.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] gi|325061528|gb|ADY65219.1| L-lactate dehydrogenase [Agrobacterium sp. H13-3] Length = 377 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 120/367 (32%), Gaps = 71/367 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F L R L + + + E +G+K+S P+ +S TG Sbjct: 30 AWTEGTYRANEEDFSKIKLRQRVL--VDMTDRSLATEMIGQKVSMPVALSP-TGLTGMQH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS----FELRQYAPHTVLISNL---- 123 A AAE+ V + + + D ++ S F+L ++NL Sbjct: 87 ADGEMLAAKAAEEFGVPFTLSTMSICSIEDVASVTSKPFWFQL-YVMKDRDFVNNLIDRA 145 Query: 124 ---GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------- 166 G L +Q Q L +GL + I Sbjct: 146 KAAGCSALVLTLDLQILGQRHKDLR-NGLSAPPKFTPKHIWQMATRPRWCLDMLRTQRCS 204 Query: 167 ---------NFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGL 204 N +DLSS + + D L K+V L D L Sbjct: 205 FGNIVGHAKNVSDLSSLSSWTAEQFDPRLSWKDVEWIKERWGGKLILKGILDEEDARASL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + I + + Sbjct: 265 DTGADAIIVSNHGGRQLDGAHSSIAMLPRI-----------------VDAVGDRVEVHMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL D V A+E +RKE +SM L G + Sbjct: 308 GGIRSGQDVLKAVALGAKGTYIGRPFLYGLGADGKQGVTTALEIIRKEMDISMALCGKRL 367 Query: 324 VQELYLN 330 + ++ + Sbjct: 368 ITDVDRS 374 >gi|116052918|ref|YP_793235.1| L-lactate dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|122257071|sp|Q02FQ1|LLDD_PSEAB RecName: Full=L-lactate dehydrogenase [cytochrome] gi|115588139|gb|ABJ14154.1| L-lactate dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] Length = 381 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 34/187 (18%) Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P G ++ + + D P+++K + L D +K G Sbjct: 213 NPTGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGI---LDPEDARDAVKFGADG 269 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRN 269 ++ GG + + + +L +A E +A G+R Sbjct: 270 IVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELAILADSGIRT 311 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+D+++ I LGA L F+ A V +E + KE V+M L G K + E+ Sbjct: 312 GLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEI- 370 Query: 329 LNTALIR 335 +L+R Sbjct: 371 SADSLVR 377 >gi|187931842|ref|YP_001891827.1| L-lactate dehydrogenase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712751|gb|ACD31048.1| L-lactate dehydrogenase [Francisella tularensis subsp. mediasiatica FSC147] Length = 380 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + S ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDCSRRN--QTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFE-----LRQYAPHTVLISNLG 124 LA+AAEK +A MA+ S + + N F+ R + + + Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQFYLMKDRGFTKSLLERAKAC 150 Query: 125 AVQ---LNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 Q +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G+ ++ GG + +PT +L +A + + I Sbjct: 267 VKVGVDGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 SDLN 372 >gi|257867383|ref|ZP_05647036.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC30] gi|257873714|ref|ZP_05653367.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC10] gi|257801439|gb|EEV30369.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC30] gi|257807878|gb|EEV36700.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC10] Length = 367 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 115/346 (33%), Gaps = 68/346 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L +I D ++ F G LS P++++ + Sbjct: 48 YQENERAFNHKLIIPHVLKDIEL--PDTTLSFGGDTLSAPIIMAPVAA----------HG 95 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGV-QK 136 LA A + A V S+ ++ S L + A ++ D G+ + Sbjct: 96 LANVAAEQASAKGV-SRFGTIYTASSYASCTLEEIRAAGGQEAPQWFQFYMSKDDGINKD 154 Query: 137 AHQAVHVLGADGLFLHLNP------------------------------LQEIIQPNGNT 166 GA + L + Q + G++ Sbjct: 155 ILAMAKRNGAKAIVLTADATVGGNRETDRRNGFTFPLAMPIVQAYQSGIGQTMDAVYGSS 214 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A ++ D+P+ +K V S D+E L +G + ++ GG + Sbjct: 215 KQKLSPQDVAFIAKESDLPVYVKGVQ---SEEDVERALGAGAQGIWVSNHGGRQLDGGPA 271 Query: 227 HRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + SL +A A + G+R G + K+I GA L Sbjct: 272 ------------------SFDSLQIVAEAVAGRAPIVFDSGVRRGQHVFKAIACGADLVA 313 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A+ + V + +KE + M L GT+ V ++ Sbjct: 314 IGRPVIYGLALGGATGVQQVFDFFKKELEMVMQLAGTQTVADIKKA 359 >gi|45658117|ref|YP_002203.1| putative glycolate oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601359|gb|AAS70840.1| putative glycolate oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 760 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 116/320 (36%), Gaps = 43/320 (13%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N ++ ++ + + E + V FLGKK P++ + MTG + +N Sbjct: 455 FQDNINALREYSILPKYIREHTQASV--EAHFLGKKFRTPVMAAPMTG----AVTNMNGA 508 Query: 79 LAIAAEKTKVAMA--VGSQRVMFSDHNAIKSF-----ELRQYAPHTVLISNLGAVQLNYD 131 + + D + + + +R+ VLI D Sbjct: 509 MDEFTFAATLLEGCHTSGTLAWLGDGASPEKYLIMLEAIRKTKADAVLICK-----PRED 563 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLL 188 G+ + + L + ++ + N + + SK+A + S +P ++ Sbjct: 564 EGL-LKERFQESEKSGLLAIGMDVDAVNFKTMTLKNISSITRNVSKLAKIRSFTKLPFIV 622 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + ++ D +L + +G ++ GG + + S GI + Sbjct: 623 KGI---MAPQDAQLAIDAGADCIVVSNHGGRVLDDMPGTARVLS---------GIRNVI- 669 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIES 307 ++ Q +A GG+R+G+D+ K I LGA + P A+ V I Sbjct: 670 -------GDKIQIVADGGVRSGMDVFKMIALGADTVLVGRPMAIFAVGGGVAGVRFLISQ 722 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 + SM + GT+ ++++ Sbjct: 723 YTDNLLQSMNVTGTETLKDI 742 >gi|121603929|ref|YP_981258.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] gi|120592898|gb|ABM36337.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Polaromonas naphthalenivorans CJ2] Length = 372 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 123/378 (32%), Gaps = 88/378 (23%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN+ F L+ R L + ++D +V G S P ++ TG Sbjct: 22 DYIDGAADDGACRQRNQADFAALTLLPRVLRDT--SQIDTTVTVFGSPWSVPFGVAP-TG 78 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 N + + LA AA + + A+ + M + +R AP + L + Sbjct: 79 LNGLIRPGGDALLAAAAARAGIPFALSTASNMPLE-------AVRAAAPEGLQWMQLYVM 131 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPL-------------------------QEIIQ 161 ++ Q G L L ++ + + Sbjct: 132 HREM---AERIVQRARRAGYQALVLTVDVPVSGNRELDLRNGFRMPFKPTPQIAWEALTH 188 Query: 162 PN--------GNTNFADLSS----------KIALLSSAMDVPLLLKEVGC---------- 193 P G +FA+L+ + AL++ AMD L+ + +G Sbjct: 189 PRWSLRMARSGTPDFANLTVAGEDAGSASLQAALMARAMDRSLVWETLGWLRKSWPGPLL 248 Query: 194 ---GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 L D L ++ GI ++ GG S + Sbjct: 249 LKGLLHPEDARLAVEHGIDGLIVSNHGGRQLDAAPSAIHALPAV---------------- 292 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLR 309 G+R G DI K+I LGA L P L A + + A ++ Sbjct: 293 -VASVQGRIPVFMDSGVRRGSDIAKAIALGAKAVFLGRPLLYGLAAQGAAGIDAVMKQFS 351 Query: 310 KEFIVSMFLLGTKRVQEL 327 E + +M LLG R+ +L Sbjct: 352 DELVRTMILLGASRIADL 369 >gi|254489163|ref|ZP_05102367.1| peroxisomal (S)-2-hydroxy-acid oxidase [Roseobacter sp. GAI101] gi|214042171|gb|EEB82810.1| peroxisomal (S)-2-hydroxy-acid oxidase [Roseobacter sp. GAI101] Length = 370 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 111/353 (31%), Gaps = 72/353 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L+ + L + LGK+ P++++ M + Sbjct: 39 AEAGQSVTENRAAFGRIGLLPKLLSPCAGGH--TRTTILGKQAPHPIMVAPMA--FQNLF 94 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + A + A V S + + I + R++ + Q +++ Sbjct: 95 HPQGESATAMAAAAQDATMVLSCQTS-TPPEDIATIPGRRWFQLYM--------QADHEA 145 Query: 133 GVQKAHQAVHVLGADGLFLHLNP------------------------LQEIIQP------ 162 + +AV GAD L + L+ L + QP Sbjct: 146 TMALVTRAVD-CGADALVVTLDAPINGLRDREVAAGFTLPDDVRPVMLDVLPQPPRPHLR 204 Query: 163 -------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +G FA + +A L + VP+++K L D + G + ++ Sbjct: 205 DGQSVVFDGMMVFAPTADDLARLIADSPVPVIVKGC---LRPADATRLIDLGAQGIIVSN 261 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + P + GG+R G D+ K Sbjct: 262 HGGRVLDTVPA-----------------PITQLAAVVDAVAGAVPVYVDGGIRRGSDVFK 304 Query: 276 SIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA + P + + D + LR E V+M L G V ++ Sbjct: 305 ALALGAQAVLVGRPVMHGLIVDGPRGASQVLRRLRDELEVTMALCGCATVADI 357 >gi|332678284|gb|AEE87413.1| L-lactate dehydrogenase [Francisella cf. novicida Fx1] Length = 380 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 120/364 (32%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALARAAEKLDIAYTMSTMAICSLETVAKEVNNPFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q I Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWIWGYLLSRYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L +A + + I Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 SDLN 372 >gi|167627822|ref|YP_001678322.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597823|gb|ABZ87821.1| L-lactate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 380 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 118/363 (32%), Gaps = 76/363 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 + + N++ F + A + E + ++E G K S P I+ M G Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDC--SERNQAIEIFGFKSSVPFAIAPIGMAGMFWPKG 91 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 E LA AAEK +A MA+ S + + N F+L R + + + Sbjct: 92 EI---ALAQAAEKLDIAYTMSTMAICSLETVRDEVNNPFWFQLYLMKDRGFIKSLLERAK 148 Query: 123 LG---AVQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQPNGNTNF--- 168 + + +N D V + + + +++ Q + + Sbjct: 149 VSGCKTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDLINIATKQSWAWGYLLSKYKQF 207 Query: 169 -----------ADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGL 204 + S + S D + K+V L++ E + Sbjct: 208 GNLSGHIPTGARGMKSVTDFMDSQFDQSVTWKDVEWLRSIWDGNLIIKGLLNTQGAENAV 267 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 K G ++ GG + +PT +L +A + I Sbjct: 268 KVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIAEKVKGNTKIIL 309 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D++K++ LGA + PFL V L+KE +M L G Sbjct: 310 DSGIRSGQDVIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYNILKKEIDNTMALAGIT 369 Query: 323 RVQ 325 + Sbjct: 370 DLN 372 >gi|149184828|ref|ZP_01863146.1| hypothetical protein ED21_28958 [Erythrobacter sp. SD-21] gi|148832148|gb|EDL50581.1| hypothetical protein ED21_28958 [Erythrobacter sp. SD-21] Length = 382 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 64/390 (16%), Positives = 112/390 (28%), Gaps = 95/390 (24%) Query: 8 DHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN FD+ L+ L + +D S +G + PL++S T Sbjct: 26 DYIDGAADDELTKARNTSAFDEVDLVPDVLAG--VERIDTSCTIMGCRSELPLMLSP-TA 82 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 R +A AAEK V + S + A + AP + V Sbjct: 83 LQRAFHRDGERAVAKAAEKFGVWFGISSLATHSIEEIAALT-----SAPKLFQL----YV 133 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---------------- 170 + + D L L ++ I+ Sbjct: 134 HKDKGLNASMIER-CKAADFDALALTVDT---IVSGKRERCLRSGFTTPPRFSASSLWSY 189 Query: 171 -----------------LSSKIALLSSAMDVPLLLKE-----VGCGLSSMDIELG----- 203 L + +S + +++ + G+ Sbjct: 190 ATRPRWTLDYVFGPKFRLPNLDGYVSEGTGKSVSIQDYFNTMLDTGMDWDTAARIRQDWG 249 Query: 204 -----------------LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 ++ G I+ GG + D +I Sbjct: 250 GTFALKGIMSVADARRAVEIGADAIWISNHGGRQLDGSRAPFDQLKEI------------ 297 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAI 305 E + I GG+R G ++KS+ +GA+ +L A + V A+ Sbjct: 298 -----VDAVGGEIEIILDGGVRRGTHVMKSLAMGATAASGGRLYLYALAAAGQEGVERAL 352 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L++E +M L+G VQ+L R Sbjct: 353 TILKEEIERAMRLMGVASVQQLNRERLRFR 382 >gi|186470942|ref|YP_001862260.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gi|184197251|gb|ACC75214.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 357 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 123/366 (33%), Gaps = 73/366 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ FD W L R L I + S E LG+++S PL+I+ TG N+ Sbjct: 10 ADDESGLRHNRAAFDRWELRPRRL--IDVSKRVQSTELLGRQISSPLVIAP-TGLNSAFW 66 Query: 73 ERINRNLAIAAEKTKV--AMAVGSQRVMFSDHNAIK---SFEL----RQYAPHTVLISN- 122 + +LA AA K + A++ S + F+L R A V + Sbjct: 67 PNGDLSLARAASKAGIPFALSTASNMSIEEVSRGADGDLWFQLYVVHRNLAKSLVSRARA 126 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQPN-------------- 163 + L D V Q + + + P L I P Sbjct: 127 ASYSTLILTTDVAVNGFRQR-DLRNGFAMPFKVTPRGALDGISHPRWLWSYLTNGMPQLK 185 Query: 164 ------------------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + L LL+K + +++ D E ++ Sbjct: 186 NFATDDASDTASQAAVLRREMDASFGWDDLRRLRDDWPGKLLVKGI---VTAEDAERCVE 242 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + + + D +L I Sbjct: 243 IGADGVIVSNHGGRQLADLPAPID------------------ALPSISDATPTTDLILDS 284 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K++ LGA+ L L +A V + +++E S+ L+G + Sbjct: 285 GIRRGADVVKAVALGATAVMLGRATLYGLSAKGEAGVSDVVAMIKEEIDRSLALIGYSSI 344 Query: 325 QELYLN 330 E+ + Sbjct: 345 MEVDRS 350 >gi|325192617|emb|CCA27043.1| peroxisomal (S)2hydroxyacid oxidase putative [Albugo laibachii Nc14] Length = 379 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 100/359 (27%), Gaps = 77/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R L + + LG ++ P+ I+ T + Sbjct: 37 ADDKVTLKENQNAFQRIKLRPRVL--RNVSTMHMRTSLLGSEVDTPVCIAP-TAMHCMAH 93 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A AA + M + S + + + + + L V + D Sbjct: 94 YEGEVATARAAARMNTCMIL----STLSTKSIED---VANASGNGLRWFQL-YVFKDRDL 145 Query: 133 GVQKAHQAVHVLGADGLFLHLNP-------------------LQEIIQPNGNTNFADL-- 171 + +A G + L ++ L+ +A Sbjct: 146 TLSLVKRA-EQAGYKAIVLTVDTPVFGQREADVRNRFALPRHLKLANFTEVERKYAHSVQ 204 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + L +PL++K + L++ D L + G Sbjct: 205 STEGSGVAEYVSTFFDPTLDWDDVKWLKRNTTLPLVIKGI---LTAEDAVLVAEIGCDAI 261 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRN 269 ++ G + + T +L + GG R Sbjct: 262 IVSNHGARQLDGV------------------LATIEALPEVVKAVKGMTVEVYVDGGFRR 303 Query: 270 GVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI K++ LGA L P L + + L E +M GT+R+ ++ Sbjct: 304 GTDIFKALALGARAVFLGRPILWGLSHDGETGAYKVLRMLTDELQTTMVFSGTRRLCDI 362 >gi|332527990|ref|ZP_08404024.1| L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332112564|gb|EGJ12357.1| L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 378 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 119/371 (32%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L ++D S+E G+KLS P+ ++ + TG + Sbjct: 29 AYAEQTLRRNVDDLAGVALRQRVLK--DMSQLDTSIELFGEKLSIPVTLAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AAE + + S V + A K F+L + A Sbjct: 87 RGEV---QAARAAEAQGIPFTMSSVSVCAIEEVAPKIQRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHVL--GADGLFLHLN------PLQEIIQPNGNTNFAD------- 170 ++ G V + GA +H PL+ Q + +A Sbjct: 141 LERAQAAGCSALVFTVDMPVPGARYRDMHSGMSGPNAPLRRYWQGLTHPRWAWDVGLMGK 200 Query: 171 --------------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSM 198 + + P+L+K + L Sbjct: 201 PHDLGNISTYRGQQVGLQDYMGYLGANFDPSISWKDLEWIREFWRGPMLIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D + ++ G ++ GG + + + +L +A Sbjct: 258 DAKDAVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + +A G+RNG+D+++ + LGA + ++ A V + + KE V+M Sbjct: 300 QIKIVADSGVRNGLDVVRMLALGADATMIGRAYIYALAAAGEAGVRHLLALMEKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L RV ++ Sbjct: 360 TLTSVARVADI 370 >gi|298291899|ref|YP_003693838.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] gi|296928410|gb|ADH89219.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Starkeya novella DSM 506] Length = 421 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 22/155 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + L++K + L++ D+ + G+ I+ GG + Sbjct: 276 HVEAIRRRWKGKLVVKGL---LAAADVRKARQIGVDGVIISNHGGRQLDYALAPIR---- 328 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +L R E + GG+R G D+LK++ LGA L PFL Sbjct: 329 --------------ALPELRAEAQEMTVMLDGGIRRGTDVLKALALGADFVFLGRPFLYA 374 Query: 294 A-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + ++ V+ AI L +E M L+G + + EL Sbjct: 375 ASLGGTEGVLHAIRLLSEEIHRDMALMGLRTLDEL 409 >gi|270264876|ref|ZP_06193140.1| L-lactate dehydrogenase [Serratia odorifera 4Rx13] gi|270041174|gb|EFA14274.1| L-lactate dehydrogenase [Serratia odorifera 4Rx13] Length = 379 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 111/365 (30%), Gaps = 73/365 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + + L R L + ++ G+KL+ P+++ + TG + Sbjct: 29 AYAEHTLRRNTEDLANVALRQRVL--RNMSDLSLETSLFGEKLAMPVILGPVGLTGMYAR 86 Query: 71 MIE------------RINRNLAIAAEKTKVAMAV--------------GSQRVMFSDHNA 104 E + +VA A+ G R A Sbjct: 87 RGEVQAAQAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKA 146 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG----ADGLFLHLNP----- 155 L V + + + A + L P Sbjct: 147 AGVKTLVFTVDMPVPGARYRDAHSGMSGPNAALRRMLQAFTHPQWAWDVGLRGKPHDLGN 206 Query: 156 LQEII-QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + QP ++ + + + P+++K + L D + + Sbjct: 207 VSAYRGQPTSLEDYIGWLGTNFDPSISWKDLEWIREFWEGPMIIKGI---LDPEDAKDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + T +L +A E +A Sbjct: 264 RFGADGIIVSNHGGRQLDGV------------------LSTARALPAIADAVKGEITLLA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+RNG+D+++ I LGA L F+ A V +E + KE V+M L G K Sbjct: 306 DSGIRNGLDVVRMIALGADSVLLGRAFVYALAAAGGAGVSNLLELIDKEMRVAMTLTGAK 365 Query: 323 RVQEL 327 + E+ Sbjct: 366 TIAEI 370 >gi|257877470|ref|ZP_05657123.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC20] gi|257811636|gb|EEV40456.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus casseliflavus EC20] Length = 367 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 115/346 (33%), Gaps = 68/346 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L +I D ++ F G LS P++++ + Sbjct: 48 YQENERAFNHKLIIPHVLKDIEL--PDTTLSFGGDTLSAPIIMAPVAA----------HG 95 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGV-QK 136 LA A + A V S+ ++ S L + A ++ D G+ + Sbjct: 96 LANVAAEQASAKGV-SRFGTIYTASSYASCTLEEIRAAGGQEAPQWFQFYMSKDDGINKD 154 Query: 137 AHQAVHVLGADGLFLHLNP------------------------------LQEIIQPNGNT 166 GA + L + Q + G++ Sbjct: 155 ILAMAKRNGAKAIVLTADATVGGNRETDRRNGFTFPLAMPIVQAYQSGIGQTMDAVYGSS 214 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A ++ D+P+ +K V S D+E L +G + ++ GG + Sbjct: 215 KQKLSPQDVAFIAKESDLPVYVKGVQ---SEEDVERALGAGAQGIWVSNHGGRQLDGGPA 271 Query: 227 HRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + SL +A A + G+R G + K+I GA L Sbjct: 272 ------------------SFDSLQIVAEAVAGRAPIVFDSGVRRGQHVFKAIACGADLVA 313 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A+ + V + +KE + M L GT+ V ++ Sbjct: 314 IGRPVIYGLALGGATGVQQVFDFFKKELEMVMQLAGTQTVADIKKA 359 >gi|254488445|ref|ZP_05101650.1| L-lactate dehydrogenase [Roseobacter sp. GAI101] gi|214045314|gb|EEB85952.1| L-lactate dehydrogenase [Roseobacter sp. GAI101] Length = 394 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 106/358 (29%), Gaps = 79/358 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIERINRNL 79 N+ D + L D S E G + P I+ M+G E +L Sbjct: 42 NRAALDRIGFMPSILHGEFV--PDLSTELFGHRFPLPFGIAPVGMSGLIWPDAE---AHL 96 Query: 80 AIAAEKTKVAMA---VGSQRVMFSDHNAIKSF----------ELRQYAPHTVLISNLGAV 126 A A + + + V SQ + ++ E+R + + + Sbjct: 97 ARTAARVGLPYSLSTVASQNPEDLSPHLGENAWFQLYPPRDPEIRTDMLNRARGAGFKGL 156 Query: 127 QLNYDFGVQ---------------------KAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 L D V A A A G+ P ++ + Sbjct: 157 ILTVDVPVASRRERLTRSGLTNPPRLTPRLMAQVARRPAWAMGMARRGMPNMRMLDKYKD 216 Query: 166 TNFADL---------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 T L + L A D P L+K V L D + G Sbjct: 217 TTAKGLSSTAHVGYLLRTSPDWDYVKWLRDAWDGPFLIKGV---LRPDDATQLEQIGADA 273 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + + D+ GI I G+ NG Sbjct: 274 IWVSNHAGRQFDAAPATIDMLP---------GI----------RAATGLPVIFDSGIENG 314 Query: 271 VDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +DIL+++ LGA L F L A + I+ L K+ +M LG + +++L Sbjct: 315 IDILRALALGADFVMLGQAFHLALAALGPKGIDHLIDILAKDLTANMGQLGARTLRDL 372 >gi|21229584|ref|NP_635501.1| L-lactate dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766459|ref|YP_241221.1| L-lactate dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|81307547|sp|Q4V0H2|LLDD_XANC8 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|81860437|sp|Q8PE75|LLDD_XANCP RecName: Full=L-lactate dehydrogenase [cytochrome] gi|21111056|gb|AAM39425.1| L-lactate dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571791|gb|AAY47201.1| L-lactate dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] Length = 386 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 118/368 (32%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-LQEIIQPNGNTNFAD------- 170 ++ GV V + A N L+ ++Q + +A Sbjct: 141 LERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGK 200 Query: 171 ----------------LSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIE 201 L I L++ D + K++ L D Sbjct: 201 PHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A E + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A V + + +E V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAMILT 362 Query: 320 GTKRVQEL 327 GT V E+ Sbjct: 363 GTHSVAEI 370 >gi|258653353|ref|YP_003202509.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nakamurella multipartita DSM 44233] gi|258556578|gb|ACV79520.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nakamurella multipartita DSM 44233] Length = 347 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 110/340 (32%), Gaps = 52/340 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 + + D+ R P VD + LG ++ P+ I+ ++ Sbjct: 36 ESGAAWADYRF--RPFPLRDVSAVDTASTALGVPVATPIAIAPSA--FQRLAHPDGERAT 91 Query: 81 IAAEKTKVAMAVGSQRVMF---------SDHNAIKSFELRQYAPHTVLISNL---GAVQL 128 AA ++ V S R + + + +R ++++ GA L Sbjct: 92 AAAAGQAGSLFVLSTRASLPIAEVAAAATGPWWFQVYVMRDRELTRRVVADAVTAGARAL 151 Query: 129 NYDFGVQKAHQ-------AVHVLGADGL---FLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + + + L HL P + + + I L Sbjct: 152 VLTGDTPYVGRKRQVRGTRIPLPDDHFLVNIAPHLAPGVDGRAAAAQ-DPSIGLETIDWL 210 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +P+L+K V G + L++G ++ GG R Sbjct: 211 RREFGLPVLVKGVLRG---DAADECLRAGAAGVIVSNHGGRQLDRA-------------- 253 Query: 239 QDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 +P+ +L ++ A GG+ G+D+L ++ LGA + P L Sbjct: 254 ----VPSAHALGDVVDAVAGRAPVYVDGGISCGLDVLTALALGAHGVLIGRPVLWALAAG 309 Query: 298 S-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 AV + ++ + +M L G + ++ N +L+ H Sbjct: 310 GCQAVADTLSAMTDDLRHAMALTGVAGLDQI--NRSLLHH 347 >gi|218463061|ref|ZP_03503152.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli Kim 5] Length = 324 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + PL++K V L D +G ++ GG S + Sbjct: 179 WADVAWIKEQWGGPLIIKGV---LDPEDARAAADTGADAIVVSNHGGRQLDGAPSSISML 235 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK++ LGA + PFL Sbjct: 236 PSI-----------------VDAVGDRIEIHLDGGIRSGQDVLKAVALGAKGTYIGRPFL 278 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V A+ +RKE ++M L G + + + +NT++I Q Sbjct: 279 YGLGAMGKEGVTLALGIIRKEMDITMALCGKRDIND--VNTSIISRQ 323 >gi|209547680|ref|YP_002279597.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533436|gb|ACI53371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 382 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 88/386 (22%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL------ 60 D+I+ D RN F+ L+ L EVD SV +G+KL+ P+ Sbjct: 26 DYIDGAADDEVTYRRNTAAFEACDLVPDVLRG--VAEVDMSVTVMGQKLAMPVYCSPTAL 83 Query: 61 -----------ISSMTG-------------GNNKMIERI-----------------NRNL 79 +++ G + + +I N + Sbjct: 84 QRLFHHQGERAVAAAAGKYGTMFGVSSLGTISLEEARQISAGPQVYQFYFHKDRGLNHEM 143 Query: 80 AIAAEKTKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A+ V AM V S + + F + P + ++ + + + + Sbjct: 144 MARAKNAGVQAMMLTVDSITGGNRERDKRTGFAI----PFKLNLAGMAQFAIKPSWAIDW 199 Query: 137 AHQAVHVLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 L H+ + + + + +A + A LK Sbjct: 200 LTH--ERFRLPQLENHVKMDGGSLSISRYFTEMLDPSMSW--DDVAEMVRAWGGQFCLKG 255 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + +S D + ++ G ++ GG S D ++I Sbjct: 256 I---MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQLAEI---------------- 296 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLR 309 + + GG++ G +LK++ LGA GL +L P A V A+E++R Sbjct: 297 -VDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETIR 355 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 E M L+G V +L R Sbjct: 356 TEIERDMKLMGCTSVDQLTRRNLRFR 381 >gi|296313981|ref|ZP_06863922.1| L-lactate dehydrogenase [Neisseria polysaccharea ATCC 43768] gi|296839411|gb|EFH23349.1| L-lactate dehydrogenase [Neisseria polysaccharea ATCC 43768] Length = 390 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F D + L ++ + + +G+ + P+ I+ TG + E Sbjct: 37 ETTYRENTSDFKDIRFRQKVL--VNMEGRSLEAKMIGQDVKMPVAIAPTGFTGMAHADGE 94 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 + A AAEK + + + + + + +A F+L R++ + + + Sbjct: 95 ILA---ARAAEKFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKD 151 Query: 123 LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGN---TNF 168 L +Q Q + A+ + L P E N F Sbjct: 152 AKCSALVLTADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKP--EWCMKMLNTERRTF 209 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +A + L++K + + D E Sbjct: 210 RNIVGHAKDVGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAEK 266 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 KSG ++ GG S DI ++ + Sbjct: 267 AAKSGADALIVSNHGGRQLDDTVSAIKALPDI-----------------VSAVGSDIEVW 309 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DILK+ LGA + FL + V A+E L KE +SM G Sbjct: 310 MDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGH 369 Query: 322 KRVQE 326 + +Q+ Sbjct: 370 RDIQD 374 >gi|264677079|ref|YP_003276985.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262207591|gb|ACY31689.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 378 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 124/373 (33%), Gaps = 74/373 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L ++D S+E G+K S P+ ++ + G Sbjct: 29 AYAEKTLARNVDDLADVALRQRVLK--DMSQLDTSIELFGEKFSIPVALAPV-GLTGMFA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN 122 R A+AA+K + + S V + A + F+L R + + + + Sbjct: 86 RRGEVQAAMAADKKGIPFTMSSVSVCPIEEVAPRLGRPMWFQLYVLKDRGFMKNALERAQ 145 Query: 123 ---LGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP--------NGNTNF 168 + + D V A + G + LQ + P G + Sbjct: 146 AAGVSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRY--LQAVTHPHWAVDVGLMGRPHT 203 Query: 169 AD-----------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGL 204 L + L + D + ++ L D + Sbjct: 204 LGNISTYKGQNVSLEDYMGYLGANFDPSISWSDLEWIRDFWKGPMLIKGILDPEDARDAV 263 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 + G ++ GG + + + +L +A + + +A Sbjct: 264 RFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQIKILA 305 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+RNG+DI++ + LGA + F+ A + V + L KE V+M L K Sbjct: 306 DSGVRNGLDIVRLLALGADCTMIGRAFVYALAAEGEAGVSNLLNLLEKEMRVAMTLTSVK 365 Query: 323 RVQELYLNTALIR 335 +V E+ L+R Sbjct: 366 KVSEI-TGDLLVR 377 >gi|284990924|ref|YP_003409478.1| (S)-2-hydroxy-acid oxidase [Geodermatophilus obscurus DSM 43160] gi|284064169|gb|ADB75107.1| (S)-2-hydroxy-acid oxidase [Geodermatophilus obscurus DSM 43160] Length = 427 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 119/374 (31%), Gaps = 94/374 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ RN + AL S E D SVE LG++++ PL+ + TG M Sbjct: 69 AEEEITAARNSAAYRRVTFRPDAL--RSVAEPDTSVELLGRRIAMPLVFAP-TGYTRMMH 125 Query: 73 ERINRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 +A A+ V A VGS + ++R +P L L + Sbjct: 126 HHGEAAVATVAQHVGVPYALSTVGSTSIE----------DVRAASPDGDLWFQLYYTA-D 174 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNP------LQEIIQP-------------NGNTNFAD 170 + +A G + L ++ L++++ N + Sbjct: 175 PEVNEDLLARA-EAAGYSTILLTVDTTVSGMRLRDVVNGLTIPPTLTARTVLNMSKFPVW 233 Query: 171 LSSKI------------------------------------ALLSSAMDVPLLLKEVGCG 194 +K+ L LL+K + Sbjct: 234 WFNKLTTGGMTFASLSGVPGNPTPAEVASMMFDPGLDLGSLDRLRKRWRGDLLVKGIT-- 291 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + ++ G ++ GG R + D+ I Sbjct: 292 -TPASAREVMEHGADGVVVSNHGGRQLDRSAATLDVLPAI-----------------RSA 333 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFI 313 +A + GG+ +G D++ + LGA + +L M D V+ A E L +E+ Sbjct: 334 VGQQAPVLIDGGVLHGQDVVAARALGADAVMIGRAYLYGLMAGGQDGVLRAYEILAEEYQ 393 Query: 314 VSMFLLGTKRVQEL 327 S+ LLG +R ++L Sbjct: 394 RSIQLLGVRRSEDL 407 >gi|294788903|ref|ZP_06754143.1| L-lactate dehydrogenase [Simonsiella muelleri ATCC 29453] gi|294483005|gb|EFG30692.1| L-lactate dehydrogenase [Simonsiella muelleri ATCC 29453] Length = 414 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 119/361 (32%), Gaps = 73/361 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N+ F L + L ++ + + LG++ + PL I+ TG + Sbjct: 30 ETTLRDNRNDFTPIKLRQKVL--VNMENRSLKSKLLGEEYTMPLAIAP-TGLTGMVCADG 86 Query: 76 NRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLI---SN 122 +A AAEK V M++ S + ++ ++ F+L R++ + +N Sbjct: 87 EILVARAAEKFGVPYTLSTMSIASIEDVANNTSSPFWFQLYVMRDREFMADLIQRAKKAN 146 Query: 123 LGAVQLNYDF--------GVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFAD--- 170 A+ L D ++ A + + L L + P + N + Sbjct: 147 CSALVLTADLQILGQRHRDIKNGLTAPIKPTLPNLLNLAIKPEWCMKMLNTDRRTFGNIM 206 Query: 171 ------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L+LK + L D + + Sbjct: 207 GHAKYVTDASSLMKWTAQQFDQTLSWEDVARIKDLWGGKLILKGI---LDPEDAQKAAQY 263 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG S DI N+ Q G Sbjct: 264 GVDAVVVSNHGGRQLDGALSSIQALPDI-----------------VSAVGNKVQVWLDSG 306 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+ LGA FL D V A+E L E +SM G + +Q Sbjct: 307 IRSGQDMLKAWALGARGMMTGRAFLYGLGAYGEDGVRRALEILYNEMDLSMAFTGHRNLQ 366 Query: 326 E 326 + Sbjct: 367 D 367 >gi|294625492|ref|ZP_06704121.1| L-lactate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600213|gb|EFF44321.1| L-lactate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 388 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 115/371 (30%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADVALRQRVL--RNMSDLRLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V D A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIDEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 258 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSM 316 E + +A G+R+G+D+++ + LGA L F+ A V + + KE V+M Sbjct: 300 ELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L GT + E+ Sbjct: 360 TLTGTHSIAEI 370 >gi|118497583|ref|YP_898633.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida U112] gi|195536280|ref|ZP_03079287.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida FTE] gi|118423489|gb|ABK89879.1| L-lactate dehydrogenase [Francisella novicida U112] gi|194372757|gb|EDX27468.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida FTE] Length = 380 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKVRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEVNNPFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + + I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTNFMDSQFDQSITWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L +A + + I Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 SDLN 372 >gi|300770988|ref|ZP_07080865.1| possible L-lactate dehydrogenase (cytochrome) [Sphingobacterium spiritivorum ATCC 33861] gi|300762261|gb|EFK59080.1| possible L-lactate dehydrogenase (cytochrome) [Sphingobacterium spiritivorum ATCC 33861] Length = 388 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 114/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + RN++ F+D L L + + +D S G K P IS + + + Sbjct: 39 CNEEVNLRRNERDFEDILLKPSYLQKYN--GIDMSTTIFGHKYDAPFGISPI---GLQGL 93 Query: 73 ERIN--RNLAIAAEKTKVA----------------MAVGSQRVMFSDHNA---------- 104 N LA AA K V ++ G Sbjct: 94 MWPNAPEILAKAAAKHNVPYILSTVSTSSIERIAEVSGGKAWFQLYHPTENRLRDDIIKR 153 Query: 105 --------------IKSFELRQY-------APHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + SF LR P + ISN+ + +G++ + Sbjct: 154 LQDVECPVLVVLIDVPSFGLRYREIKSGLSMPPKMNISNIFQASIRPVWGIETLRHGIPG 213 Query: 144 LGAD--GLFLHLNPLQEIIQPNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + LN Q + Q N F KI + L+LK V ++ D Sbjct: 214 FATLQPYMEKGLNMSQ-LGQFM-NRTFTGRVDIEKIKAIRDMWKGKLVLKGV---VTEED 268 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + ++ G+ ++ GG ES + + N+ Sbjct: 269 MRACIEMGVDGVIVSNHGGRQVDAGESSIASLQRLAKD---------------PEFTNKI 313 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFL 318 + GGLR+G DI +++ GA + PF+ + I + + M Sbjct: 314 TIMMDGGLRSGPDIGRALASGAEFAFMGRPFMYGVGALGTKGGDHTIAMFKAQLKQVMEQ 373 Query: 319 LGTKRVQE 326 + +++ + Sbjct: 374 ISCEKIVD 381 >gi|312381090|gb|EFR26913.1| hypothetical protein AND_06682 [Anopheles darlingi] Length = 184 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +P+++K + L+ D + G++ ++ G + + + Sbjct: 34 WDDVKWLVSFTKLPVIVKGI---LTREDALIAANLGVKGIFVSNHGARQVDSVPASIEAL 90 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 +I + + + GG+ G D+ K++ LGA + P Sbjct: 91 PEI-----------------VKAVGDRVEVFLDGGITQGTDVFKALALGARMVFFGRPAV 133 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+D V + ++ LRKE ++M L G + ++++ N Sbjct: 134 WGLAVDGQRGVESILDILRKELDLTMALAGCRTIKDITSN 173 >gi|17473683|gb|AAL38298.1| glycolate oxidase [Arabidopsis thaliana] gi|20148475|gb|AAM10128.1| glycolate oxidase [Arabidopsis thaliana] Length = 177 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K V L+ D + +++G ++ G + + Sbjct: 23 WKDVQWLQTITKLPILVKGV---LTGEDARIAIQAGAAGIIVSNHGARQLDYVPA----- 74 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T +LE + GG+R G D+ K++ LGAS + P Sbjct: 75 -------------TISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 121 Query: 291 L-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A + V ++ LR EF ++M L G + ++E+ N Sbjct: 122 VFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRN 162 >gi|120403197|ref|YP_953026.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium vanbaalenii PYR-1] gi|119956015|gb|ABM13020.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 122/367 (33%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + N+ FD W LI R L + E D +V+ G L PL ++ + G ++ Sbjct: 49 AGDEHTQRANRTAFDRWGLIPRML--VGATERDLTVDLFGMTLPSPLFMAPIGVIGICSQ 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A AA +T V M V ++ + T L + Sbjct: 107 NGQG-DLAAARAAARTGVPMTV----STLTEDPLED---VAAEFGDTPGFFQLYTPT-DR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQ-----------------E 158 D H+A G + + L N Q Sbjct: 158 DLAASLVHRA-EAAGYKAIIVTLDTWIPGWRPRDLAMSNFPQLRGRCLANYTSDPVFRAA 216 Query: 159 IIQPNGNTNFADLSSKIA------------LLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + QP A + +A L S D+PL+LK + D+ + Sbjct: 217 LSQPPEENMQAAVLQWVAQFGNALTWEDLPWLRSLTDLPLVLKGLCH---PDDVRRAKDA 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + G Sbjct: 274 GVDGVYCSTHGGRQ------------------ANGGLPALDCLPGVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI+K++ LGA+ G+ P+ A+ D +V + SL E + M + G + + Sbjct: 316 IRSGADIVKALALGATAVGVGRPYAYGLAIGGEDGIVHVLRSLLAEADLIMAVDGYRSLA 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLTPDTL 382 >gi|209558894|ref|YP_002285366.1| Lactate oxidase [Streptococcus pyogenes NZ131] gi|209540095|gb|ACI60671.1| Lactate oxidase [Streptococcus pyogenes NZ131] Length = 393 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 106 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 107 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 166 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 282 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 325 VALGRPAIYGLAMGGSTGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 379 >gi|1063400|emb|CAA63482.1| glycolate oxidase [Solanum lycopersicum] Length = 290 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 25/180 (13%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + L + +P+L+K V +++ L +++G ++ G Sbjct: 122 YVAGQIDRTLSW--KDVQWLQTITSMPILVKGV---ITADHARLAVQAGAAGIIVSNHGA 176 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSI 277 + + T +LE + GG+R G D+ K++ Sbjct: 177 RQLDYVPA------------------TISALEEVVKGAQGRIPVFLDGGVRRGTDVFKAL 218 Query: 278 ILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGAS + P + A + V ++ LR EF ++M L G + ++E+ N + Sbjct: 219 ALGASGIFIGRPVVFSLAAEGEAGVKKVLQMLRDEFELTMALSGCRSLKEITRNHIVTEW 278 >gi|326318206|ref|YP_004235878.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375042|gb|ADX47311.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] Length = 378 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 66/368 (17%), Positives = 124/368 (33%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L +D S+E G+KLS P+ ++ + TG + Sbjct: 29 AYAEQTLRRNVEDLAAVALRQRVLK--DMSRLDTSIELFGEKLSIPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA++ V + S V + A K F+L + + L Sbjct: 87 RGEV---QAARAADRHGVPFTMSSVSVCPIEEVAPKLGRPMWFQLYVLKDRGFMKNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADG-------LFLH--------------- 152 Q D V A + G + +H Sbjct: 144 AQAAGCTALVFTVDMPVPGARYRDAHSGMSGPNAALRRYWQAAMHPRWAWDVGALGRPHD 203 Query: 153 -LNPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N + +P G ++ + + + P+++K + L D + Sbjct: 204 LGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWIRAFWKGPMIIKGI---LDPEDAK 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIIVSNHGGRQLDGV------------------LSSAHALPPIADAVKGQIK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+RNG+D++++I LGA + F+ A V +E L KE V+M L Sbjct: 303 ILADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 +V ++ Sbjct: 363 SVAKVSDI 370 >gi|94987974|ref|YP_596075.1| L-lactate oxidase [Streptococcus pyogenes MGAS9429] gi|94989848|ref|YP_597948.1| L-lactate oxidase [Streptococcus pyogenes MGAS10270] gi|94541482|gb|ABF31531.1| L-lactate oxidase [Streptococcus pyogenes MGAS9429] gi|94543356|gb|ABF33404.1| L-lactate oxidase [Streptococcus pyogenes MGAS10270] Length = 395 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSTGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|269125863|ref|YP_003299233.1| Lactate 2-monooxygenase [Thermomonospora curvata DSM 43183] gi|268310821|gb|ACY97195.1| Lactate 2-monooxygenase [Thermomonospora curvata DSM 43183] Length = 389 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 110/342 (32%), Gaps = 64/342 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAE 84 FD W ++ R L + S D SV LG + PL++ + G ++ +A AA Sbjct: 63 FDRWRIVPRMLRDTSRR--DLSVRVLGTAMPAPLVVGPI--GVLSILHPDAEPGVARAAA 118 Query: 85 KTKVAMAVGSQRVMFSDHNAIKS-------FEL-----RQYAPHTVLISNL-GAVQLNYD 131 + V M + S + + A S F+L R A + + G L Sbjct: 119 ELGVPMVLSSVSSVTMEEAAEASGEGSPRWFQLYWSKNRDVAASFLERAKAAGYTALVVT 178 Query: 132 FGVQKAHQAVHVLGADGL----------FLHLNPLQEIIQP---NGNTNFADL------- 171 L L + Q+ + + N + A L Sbjct: 179 LDTHAMGWRPRDLDTAYLPFLRGIGVANYFTDPAFQKAVGGPITDANRDAAILQWVADFG 238 Query: 172 -----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + L D P+ LK + L D + +G+ ++ GG + Sbjct: 239 DPTLTWDDLPFLREHWDGPIALKGI---LHPDDARRAVDAGMDGVIVSNHGGRQVDGAMA 295 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D + A+ + G+R G DI+K++ LGA + Sbjct: 296 ALDALPGV-----------------VEAVGERAEVLFDSGIRTGADIVKALALGARAVLV 338 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A P+ + V + L E ++M L G QEL Sbjct: 339 ARPYAYGLGLAGQAGVRHVLRCLLAELELTMMLSGFTGPQEL 380 >gi|301629625|ref|XP_002943938.1| PREDICTED: l-lactate dehydrogenase [cytochrome]-like [Xenopus (Silurana) tropicalis] Length = 379 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 117/369 (31%), Gaps = 81/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN L R L ++D S+ G+KLS P+ ++ + TG + Sbjct: 29 AYAEQTLRRNVDDLAAVALRQRVLK--DMSQLDTSIALFGEKLSIPVALAPVGLTGMYRR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ +A + S V + A K F+L + + L Sbjct: 87 RGEV---QAARAADAHGIAFTMSSVSVCPIEEVAPKLQRPMWFQLYVLKDRGFMQNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVHVLGADGLFLHLNPL-----QEIIQPN--------G 164 Q D V A A N Q + P G Sbjct: 144 AQAAGCSTLVFTVDMPVPGARYR----DAHSGMSGPNAALRRYWQAVTHPRWAWDVGLLG 199 Query: 165 NTN-----------FADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDI 200 + L + L + D + K++ L D Sbjct: 200 RPHDLGNISAYRGSPTGLQDYMGYLGANFDPSISWKDLEWIRAFWKGPMVIKGILDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQI 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 + +A G+RNG+D++++I LGA + ++ A V +E L KE V+M L Sbjct: 302 KILADSGIRNGLDVVRAIALGADCAMIGRAYIYALATAGEAGVKHLLELLEKEMRVAMTL 361 Query: 319 LGTKRVQEL 327 +V ++ Sbjct: 362 TSVAKVADI 370 >gi|254374399|ref|ZP_04989881.1| hypothetical protein FTDG_00566 [Francisella novicida GA99-3548] gi|151572119|gb|EDN37773.1| hypothetical protein FTDG_00566 [Francisella novicida GA99-3548] Length = 383 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 119/367 (32%), Gaps = 81/367 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALARAAEKLDIAYTMSTMAICSLETVAKEVNNPFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL----EMARPYCNEA 259 +K G ++ GG + +PT +L + + Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAIADKVNKVKGDI 308 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFL 318 + I G+R+G DI+K++ LGA + PFL V + L+KE +M L Sbjct: 309 KIILDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMAL 368 Query: 319 LGTKRVQ 325 G + Sbjct: 369 AGISDLN 375 >gi|325526165|gb|EGD03809.1| putative L(+)-mandelate dehydrogenase [Burkholderia sp. TJI49] Length = 388 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 125/368 (33%), Gaps = 75/368 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ R L + + +VE G++ + P I+ M G + Sbjct: 36 AEDNRTRDDNRAVFDEYGFTTRVL--RNVSQRQQTVELFGRRYASPFGIAPM-GIHALST 92 Query: 73 ERINRNLAIAAEKTKVA--MAVGSQRVMFSDHNAIK--SFE----------------LRQ 112 R + LA AA++ +A M+ S + A F+ + + Sbjct: 93 YRGDIVLARAAQRAGIASIMSGSSLIPLEEVAAAAPGTWFQAYLPGDTDRISALLERVAR 152 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++I+ V N + V+ + + A L H Sbjct: 153 AGYRTLVITVDIPVSANRENNVRTGFTTPLRPGPRLFWDGITHPRWLAGTFARTLLAHGM 212 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ +F+ + + L++K + LS D Sbjct: 213 PHFENSFATRGAPILSSTVLRDFSARDHLDWGHLERIRREWKGELVIKGI---LSVDDAV 269 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + +G ++ GG S + D+ R + Sbjct: 270 IARDAGADAIILSNHGGRQLDGAVSPLRILPDV-----------------VRALGADYPV 312 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ +GA + + PF A +A V+ AI LR E +M +LG Sbjct: 313 MIDSGFRRGSDVLKAVAMGARMVFVGRPFNYAAAVGGEAGVLHAIGLLRDEVDRNMAMLG 372 Query: 321 TKRVQELY 328 ++ EL Sbjct: 373 VEQCSELK 380 >gi|116328676|ref|YP_798396.1| dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330667|ref|YP_800385.1| dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121420|gb|ABJ79463.1| Dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124356|gb|ABJ75627.1| Dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 760 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 107/308 (34%), Gaps = 41/308 (13%) Query: 32 IHRALPEISFDEVD--PSVEFLGKKLSFPLLISSMTGGNNKMIERINR------NLAIAA 83 + LP+ + + FLGK + P++ + MTG M ++ L Sbjct: 464 EYSILPKYIREHIQAVVETNFLGKAIQTPVMAAPMTGAVTNMNGAMDEFTFAATLLEGCR 523 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV-QKAHQAVH 142 +A + I +R+ +LI D G+ ++ + Sbjct: 524 TSGTLAWLGDGASP---EKYLIMLEAVRKTKADAILICK-----PREDEGLLEERFRESE 575 Query: 143 VLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + ++ + + ++ S++ + S +P ++K + ++ D + Sbjct: 576 NSDLFAIGMDVDAVNFRTMMSKNISSVTRNVSRLGRIRSLTKLPFIVKGI---MTPQDAQ 632 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L + +G ++ GG + T L R + Sbjct: 633 LAIDAGADCIVVSNHGGRVLDDMPG------------------TARVLPGIRKVIGDKVQ 674 Query: 262 IA-SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA-AIESLRKEFIVSMFLL 319 IA GG+R+G+D+ K I LGA + P A+ A + I + + SM + Sbjct: 675 IAVDGGVRSGMDVFKMIALGADTVLIGRPMAIFAIGGGVAGIRFLISQYTENLLQSMNVT 734 Query: 320 GTKRVQEL 327 G ++E+ Sbjct: 735 GVGTLKEI 742 >gi|54025265|ref|YP_119507.1| putative L-lactate dehydrogenase [Nocardia farcinica IFM 10152] gi|54016773|dbj|BAD58143.1| putative L-lactate dehydrogenase [Nocardia farcinica IFM 10152] Length = 416 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 110/370 (29%), Gaps = 88/370 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + IDR +K F D H A+ +V E LG +S P I+ TG M Sbjct: 58 AEAEISIDRARKAFQDIEF-HPAILR-DVSKVTTGWEVLGGPVSLPFGIAP-TGFTRMMQ 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A A + + ++ + D + PH L + + D Sbjct: 115 TEGEHAGARVAGRAGIPFSLSTMGTASIED--------VAAANPHGRNWFQL-YMWKDRD 165 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------FADLS 172 + +A G D L + ++ + N Sbjct: 166 RSMALVERAATA-GFDTLLVTVDVPVAGARLRDTRNGMSIPPALTPATVLDALPRPRWWI 224 Query: 173 S----------------------------------KIALLSSAMDVPLLLKEVGCGLSSM 198 +A + +++K + + Sbjct: 225 DFLTTEPLAFASLDRWSGTVAELLDTMFDPTVTFEDLAWIRDQWPGKVVVKGIQ---TLA 281 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + +G+ ++ GG R L ++ AR + Sbjct: 282 DARAVVDTGVDGIVLSNHGGRQLDRAPVPFHLLPEV-----------------ARELGGD 324 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMF 317 + + G+ +G DI+ ++ LGA + +L M +A V A++ L + +M Sbjct: 325 TEILLDTGIMSGADIVAAVALGARCTLVGRAYLYGLMAGGEAGVQRAVDILTGQLERTMR 384 Query: 318 LLGTKRVQEL 327 LLG ++EL Sbjct: 385 LLGVTCLEEL 394 >gi|298290692|ref|YP_003692631.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] gi|296927203|gb|ADH88012.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] Length = 379 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 121/361 (33%), Gaps = 70/361 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + I N+ + L R + I + + +G+K++ PL I+ TG G Sbjct: 32 DEVTIRANRTALEAIPLRQRVM--IDVSDRSTATTMIGEKVALPLAIAP-TGLTGLFHGN 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTV---L 119 I+ AA+ + + + + + A F+L R+++ + Sbjct: 89 GEIHG--CRAAQAAGIPFTLSTVSICSIEDVAGAVDKPFWFQLYVMRDRKFSESLIERAK 146 Query: 120 ISNLGAVQLNYDFGVQKAHQA---------VHVLGADGLFLHLNPLQEI-IQPNGNTNFA 169 + A+ L D +Q + A+ + + P + + F Sbjct: 147 AAKCSALVLTLDLQIQGQRHMDIKNGLSVPPKLTLANAIDIATKPGWALGVLGGKRRTFG 206 Query: 170 DLSSKI----------ALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKS 206 +L+ ++ + S D L K+V L D ++ + Sbjct: 207 NLADRVPGGDSLTTLSQWIGSQFDPSLSWKDVEWVRSIWPGKLILKGVLDVEDAKMAAAT 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG + I +++ GG Sbjct: 267 GADAIVVSNHGGRQLDGAVASISALPRIVDAIGG----------------GKSEIWFDGG 310 Query: 267 LRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +++G D+LK++ LGA + FL A V AI+ +RKE VSM L G K + Sbjct: 311 VQSGQDVLKAVALGAKGCLMGKAFLWSLAAGGQAGVAKAIDIIRKELDVSMALTGVKDIT 370 Query: 326 E 326 + Sbjct: 371 Q 371 >gi|227537597|ref|ZP_03967646.1| possible L-lactate dehydrogenase (cytochrome) [Sphingobacterium spiritivorum ATCC 33300] gi|227242546|gb|EEI92561.1| possible L-lactate dehydrogenase (cytochrome) [Sphingobacterium spiritivorum ATCC 33300] Length = 388 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 114/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + RN++ F+D L L + + +D S G K P IS + + + Sbjct: 39 CNEEVNLRRNERDFEDILLKPSYLQKYN--GIDMSTTIFGHKYDAPFGISPI---GLQGL 93 Query: 73 ERIN--RNLAIAAEKTKVA----------------MAVGSQRVMFSDHNA---------- 104 N LA AA + V ++ G Sbjct: 94 MWPNAPEILAKAAARHNVPYILSTVSTSSIERIAEVSGGKAWFQLYHPTENRLRDDIIKR 153 Query: 105 --------------IKSFELRQY-------APHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + SF LR P + ISN+ + +G++ + Sbjct: 154 LQDVECPVLVVLIDVPSFGLRYREIKSGLSMPPKMNISNIFQASIRPVWGIETLRNGIPS 213 Query: 144 LGAD--GLFLHLNPLQEIIQPNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + LN Q + Q N F KI + L+LK V ++ D Sbjct: 214 FATLKPYMEKGLNMSQ-LGQFM-NRTFTGRVDIEKIKAIRDMWKGKLVLKGV---VTEED 268 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + ++ G+ ++ GG ES + + N+ Sbjct: 269 MRACIEMGVDGVIVSNHGGRQVDAGESSIASLQRLAKD---------------PEFTNKI 313 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFL 318 + GGLR+G DI +++ GA + PF+ + I + + M Sbjct: 314 TIMMDGGLRSGPDIGRALASGAEFAFMGRPFMYGVGALGTKGGDHTIAMFKAQLKQVMEQ 373 Query: 319 LGTKRVQE 326 + +++ + Sbjct: 374 ISCEKIVD 381 >gi|58579645|ref|YP_198661.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621679|ref|YP_449051.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188574291|ref|YP_001911220.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] gi|81312033|sp|Q5H6Z4|LLDD_XANOR RecName: Full=L-lactate dehydrogenase [cytochrome] gi|123523707|sp|Q2P9K0|LLDD_XANOM RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259491779|sp|B2SUY3|LLDD_XANOP RecName: Full=L-lactate dehydrogenase [cytochrome] gi|58424239|gb|AAW73276.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365619|dbj|BAE66777.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188518743|gb|ACD56688.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 388 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 114/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ + + TG + Sbjct: 29 AYAEHTLRRNVSDLADVALRQRVL--RNMSDLRLSTELFGETLAMPVALGPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGK 200 Query: 164 ---------GNTNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIE 201 N L I L + D + K++ L D Sbjct: 201 PHDLGNISAYRGNPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A E + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A D V + + KE V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAADGQAGVENLLTLIEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 GT + ++ Sbjct: 363 GTHSIAQI 370 >gi|93279062|pdb|2CDH|0 Chain 0, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. gi|93279063|pdb|2CDH|1 Chain 1, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. gi|93279064|pdb|2CDH|2 Chain 2, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. gi|93279065|pdb|2CDH|3 Chain 3, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. gi|93279096|pdb|2CDH|Y Chain Y, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. gi|93279097|pdb|2CDH|Z Chain Z, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution Length = 226 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 58/279 (20%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 + LG K+S P++I+ KM E S ++ Sbjct: 1 TTTILGFKISMPIMIAPTA--MQKMAHP---------EGEYATARAASAAGTIMTLSSWA 49 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV---HVLGADGLFLHLNPLQEIIQPN 163 + + + A + QL Q V G + L + Sbjct: 50 TSSVEEVASTGP---GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV---------- 96 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 +A L + +P+L+K V +++ D L ++ G ++ G Sbjct: 97 --------WKDVAWLQTITSLPILVKGV---ITAEDARLAVQHGAAGIIVSNHGARQLDY 145 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T ++LE + GG+R G D+ K++ LGA+ Sbjct: 146 VPA------------------TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAA 187 Query: 283 LGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + P + A + V ++ +R EF ++M L G Sbjct: 188 GVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSG 226 >gi|289663361|ref|ZP_06484942.1| L-lactate dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 388 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 115/371 (30%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERARAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 258 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 E + +A G+R+G+D+++ + LGA L F+ A V + + KE V+M Sbjct: 300 ELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAAGQAGVENLLTLIEKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L GT + E+ Sbjct: 360 TLTGTHSIAEI 370 >gi|165977292|ref|YP_001652885.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|259494964|sp|B0BTC7|LLDD_ACTPJ RecName: Full=L-lactate dehydrogenase [cytochrome] gi|165877393|gb|ABY70441.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 381 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 124/372 (33%), Gaps = 79/372 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + ++RN D L R L ++D +E G+KL+ P +++ + G R Sbjct: 31 SERTLERNVTDLADLALRQRVLK--DMSQLDTEIELFGEKLAMPAVLAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL- 123 A AAE + + + + + L R + H + + Sbjct: 88 GEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAA 147 Query: 124 --------------GAVQLNYDFGV----QKAHQAVHVL--------------------- 144 GA + G+ ++ +A+ + Sbjct: 148 GCSTLVFTVDMPTPGARYRDRHSGMSGDYKEIRRALQAVTHPFWAWDVGIKGKPHTLGNV 207 Query: 145 -GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + L+ + N + + + + + D P+++K + L D + Sbjct: 208 SAYTGKAVGLDDYVVWLGENFDPSISW--KDLEWIRDFWDGPMVIKGI---LDPEDAKDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + +L +A + + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGA------------------LSSARALPSIADAVKGDIKIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+DI++ + LGA L F+ V ++ +KE V+M L Sbjct: 305 ADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSN 364 Query: 322 KRVQELYLNTAL 333 +++ ++ + + Sbjct: 365 QKISDITRDALV 376 >gi|197104607|ref|YP_002129984.1| L-lactate dehydrogenase [Phenylobacterium zucineum HLK1] gi|196478027|gb|ACG77555.1| L-lactate dehydrogenase [Phenylobacterium zucineum HLK1] Length = 379 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + D P+++K V L D +++G + ++ GG ++S Sbjct: 236 WKDLDWVRENWDRPIVVKGV---LDVEDARDAVRAGAQGVVVSNHGGRQLDGVKSSIASL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I E + GG+R+G+D+LK++ LGA + P+ Sbjct: 293 PRIAD-----------------AVGGELEVFMDGGVRSGLDVLKALALGAKACFVGRPWA 335 Query: 292 KPAMDSSDAVV-AAIESLRKEFIVSMFLLGTKRVQ 325 +A + + +R E V+M L G V+ Sbjct: 336 YALGAGGEAAIGKMLGLMRSELAVAMILTGCNDVR 370 >gi|166710046|ref|ZP_02241253.1| L-lactate dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 388 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 113/368 (30%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSELADVALRQRVL--RNMSDLRLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGK 200 Query: 164 ---------GNTNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIE 201 N L I L + D + K++ L D Sbjct: 201 PHDLGNISAYRGNPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A E + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A V + + E V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIENEMRVAMTLT 362 Query: 320 GTKRVQEL 327 GT + E+ Sbjct: 363 GTHSIAEI 370 >gi|317054438|ref|YP_004118463.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] gi|316952433|gb|ADU71907.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] Length = 384 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 117/373 (31%), Gaps = 86/373 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F W L + L+ PLL++ TG N + Sbjct: 28 ADDELTLRHNREVFARWMFKPPVLQ--DASQRSLQTSLANDLLAAPLLVAP-TGYNGMLR 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + + LA AA + + G + S + +S + Q P + L Q+ Sbjct: 85 YQADLMLARAAAQQGI----GYIQSTVSTASLEESAAVSQG-PRWFQLYVLKDRQVTASL 139 Query: 133 GVQKAHQA--------VHVLGA-----------DGLFLHLNPLQEI----------IQPN 163 +++A A V + L L + L ++ ++P Sbjct: 140 -IERAQAAGCSALVVSVDAVHFGNRERDKSHYRRPLKLSVKALADVASHPGWVWRTLRPA 198 Query: 164 GNTNFADL---------------------------SSKIALLSSAMDVPLLLKEVGCGLS 196 G F +L + L PL +K + ++ Sbjct: 199 GMPGFGNLKPYLPPEYQQGLNAATYFAQQMDPTLNWETLRWLRELWSGPLYIKGI---MT 255 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D + + G ++ GG S + I Sbjct: 256 EQDALIARQLGFDGIVLSNHGGRQLDGTFSPMQVLPAI-----------------RAAVG 298 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV-AAIESLRKEFIVS 315 + + G R G D++K++ LGA+ L P L +A+V A ++ + E + Sbjct: 299 PDFSLLIDSGFRRGTDVVKALALGANAVLLGRPLLYAVAAGGEALVNATLQGMIAEIDRT 358 Query: 316 MFLLGTKRVQELY 328 + LG + + +L+ Sbjct: 359 LAQLGCRAISDLH 371 >gi|325568885|ref|ZP_08145178.1| lactate 2-monooxygenase [Enterococcus casseliflavus ATCC 12755] gi|325157923|gb|EGC70079.1| lactate 2-monooxygenase [Enterococcus casseliflavus ATCC 12755] Length = 367 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 114/346 (32%), Gaps = 68/346 (19%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N+ F+ +I L +I D ++ F G LS P++++ + Sbjct: 48 YQENELAFNHKLIIPHVLKDIEL--PDTTLSFGGDTLSAPIIMAPVAA----------HG 95 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGV-QK 136 LA A + A V S+ ++ S L + A ++ D G+ + Sbjct: 96 LANVAAEQASAKGV-SRFGTIYTASSYASCTLEEIRAAGGQEAPQWFQFYMSKDDGINKD 154 Query: 137 AHQAVHVLGADGLFLHLNP------------------------------LQEIIQPNGNT 166 GA + L + Q + G++ Sbjct: 155 ILAMAKRNGAKAIVLTADATVGGNRETDRRNGFTFPLAMPIVQAYQSGIGQTMDAVYGSS 214 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A ++ D+P+ +K V S D+E L +G + ++ GG + Sbjct: 215 KQKLSPQDVAFIAKESDLPVYVKGVQ---SEEDVERALGAGAQGIWVSNHGGRQLDGGPA 271 Query: 227 HRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + SL +A A + G+R G + K+I GA L Sbjct: 272 ------------------SFDSLQIVAEAVAGRAPIVFDSGVRRGQHVFKAIACGADLVA 313 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A+ + V + +KE + M L GT+ V ++ Sbjct: 314 IGRPVIYGLALGGATGVQQVFDFFKKELEMVMQLAGTQTVADIKKA 359 >gi|295680951|ref|YP_003609525.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1002] gi|295440846|gb|ADG20014.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1002] Length = 419 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 118/369 (31%), Gaps = 74/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F + + R L ++ ++ SV G++ + P +I TG + M Sbjct: 40 AEDEATLRRNRDVFREIAFLPRTL--VNVEKRKQSVTLFGERSASPFMIGP-TGYSGLMF 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKS---------FELRQYAPHTVLISN 122 + LA AA + + + V D + R+ + Sbjct: 97 REGDVKLASAAAAAGIPFVLSNVSTVSLEDVVQRAGGRVWMQVYMYRTRESLAKLAQRAK 156 Query: 123 ---LGAVQLNYDFGVQKAHQA-----VHVLGADG-----LFLHLNPLQEIIQPNGNTNFA 169 + A+ + D V + + L D + H + ++ PNG FA Sbjct: 157 AAGIEALVVTTDSAVFGKREWDLRNYIEPLKLDWRNKFDVLRHPGWMANVLWPNGMPRFA 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L L++K V L + D Sbjct: 217 NLGDLLPPGQDSVKGATITLGRELDPSLSWDDIRWLRDLWPRRLIVKGV---LGAPDALK 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 L++G+ ++ GG S D+ ++ + + Sbjct: 274 ALEAGVDGIVLSNHGGRQLDSAVSAMDVLPEV-----------------VEQVGGKLCVM 316 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG R G +ILK++ LGA L V AIE L+ E ++ LLG Sbjct: 317 LDGGFRRGSEILKAVALGADAVLLGRATTYGLSAGGQPGVERAIEILQTEIDRALGLLGC 376 Query: 322 KRVQELYLN 330 + L + Sbjct: 377 CDIAGLDRS 385 >gi|115768301|ref|XP_799303.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115971322|ref|XP_001188735.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 327 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 105/322 (32%), Gaps = 70/322 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N++ F L R L + D S LG++L +P+ I+ + + Sbjct: 30 ANDEQTLDDNREAFKRLRLYPRIL--RDVSKRDMSTTVLGQRLPYPIAIAPTA---MQRM 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + +A A T +M G ++ S + E+ + + + + L V + D Sbjct: 85 AHPDGEVATARAST--SMGTG---MILSSWSTRSIEEVAEASRNGLRWFQL-YVYRDRDV 138 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQ------------EIIQPNGNTNF------------ 168 +A G +F+ ++ + +P NF Sbjct: 139 TRDLVKRA-EKAGYKAIFVTVDTPMLGKRLADMRNKFSLPEPYRLANFTIKTNRGGVQGS 197 Query: 169 ---------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + I L + +P++LK V L++ D + + Sbjct: 198 SSSGLSEYVASLIDPSLSWKHIEWLKTITSLPIILKGV---LTAEDAREAAAHNLAGVVV 254 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + G + S D ++ + G+ + GG+R G D+ Sbjct: 255 SNHGARQLDGVPSTIDALPEVADALKGTGL----------------EVYLDGGVRTGTDV 298 Query: 274 LKSIILGASLGGLASPFLKPAM 295 LK+I LGA + P L Sbjct: 299 LKAIALGARAVFVGRPALWALT 320 >gi|119898761|ref|YP_933974.1| L-lactate dehydrogenase [Azoarcus sp. BH72] gi|119671174|emb|CAL95087.1| conserved hypothetical L-lactate dehydrogenase (cytochrome) [Azoarcus sp. BH72] Length = 373 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 102/366 (27%), Gaps = 75/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + + N + L L + +D S+E G++ P ++ TG G + Sbjct: 26 AGDETCLQENLAALRNIRLWPSVLRDT--SGIDTSIEVFGERWRLPFAVAP-TGFNGLFR 82 Query: 71 MIERI-------------------NRNLAIAAEKTK-------VAMAVGSQRVMFSDHNA 104 I N L A + M S Sbjct: 83 PDGDILIARAAARAGVPFSLSTASNTRLEEVARQADGLRWLQLYVMGDRSIAEQIMRRGW 142 Query: 105 IKSFELRQYAPHTVL-------ISNLGAVQLNYDF--GVQKAHQAVHVLGADG------- 148 + + + I N + + A +L G Sbjct: 143 DAGYRVLVLTVDVPVNGYRKRDIRNGFRLPFRPGLMTALDLARHPRWILQFAGRRFPNFA 202 Query: 149 -LFLHLN-PLQEIIQP---NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L H + +Q N + ++ + + P+++K V L D Sbjct: 203 NLSEHPDTAASAQVQAALLNRTMDRTLAWESLSWVRAHWKGPVVVKGV---LHPDDAARA 259 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 + G ++ GG + T +L + Sbjct: 260 VAEGADGIVVSNHGGRQLKSAPA------------------TIEALPLVVERVDGAVPVF 301 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG R+G D+ K++ GA L P L A V + LR++ +M L+G Sbjct: 302 VDGGFRSGEDVAKALGRGAKAVFLGRPVLYGLAAAGEAGVERVFDWLREDLERTMILMGR 361 Query: 322 KRVQEL 327 +R+ EL Sbjct: 362 RRIDEL 367 >gi|307727919|ref|YP_003911132.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1003] gi|307588444|gb|ADN61841.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1003] Length = 411 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 115/369 (31%), Gaps = 74/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ FD+ + R L ++ + S G++++ P +I TG + M Sbjct: 40 AEDETTLRRNRNVFDEIAFLPRTL--VNVEHRCQSRTLFGQRVASPFMIGP-TGYSGLMY 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKS---------FELRQYAPHT---VL 119 + LA AA + + + + D + R++ L Sbjct: 97 REGDVQLASAAAAAGIPFVLSNASTIALEDVVQRAGGRVWMQVYMYRTREFVAKLAQRSL 156 Query: 120 ISNLGAVQLNYDFGVQKAHQ----------AVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + + A+ + D V + + + H + ++ P+G FA Sbjct: 157 AAGIEALVVTTDSAVFGKREWDLRNYIKPLMLDWRNRFDVLGHPRWMSNVLWPSGMPRFA 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L L++K V L + D Sbjct: 217 NLGDLLPPGQTSVKGATITLGQQLDPSLSWDDIRWLRDLWPKRLIVKGV---LGAPDALR 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +++G+ ++ GG S D+ ++ + Sbjct: 274 AVEAGVDGIVLSNHGGRQLDGAVSAMDVLPEV-----------------VDQVRGRLAVM 316 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG R G DILK++ LGA L AI+ L+ E + LLG Sbjct: 317 LDGGFRRGSDILKAVALGADAVLLGRATTYGLSAGGQRGAARAIQILQTEVDRGLGLLGC 376 Query: 322 KRVQELYLN 330 + L + Sbjct: 377 SDIAALDRS 385 >gi|260904860|ref|ZP_05913182.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Brevibacterium linens BL2] Length = 422 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 112/368 (30%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + ++R+ + F D L +VD + + LG + P I+ Sbjct: 59 AEGEISMERSVQAFQDIEFHPSILH--DVSQVDTTTQILGGSSAMPFGIAPTGFTRLMQT 116 Query: 65 --------------------TGGNN--KMIERINRN------------------LAIAAE 84 T G + ++++N N L A Sbjct: 117 EGETAGASASGAAGIPFTLSTLGTTSIEDVKKVNPNGRNWFQLYVMRQREISYGLVERAA 176 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + V + ++ F + Q +P TVL + + +DF Sbjct: 177 AAGYDTLFFTVDTPIAGARLRDSRNGFSIPPQLSPKTVLNA-IPRPWWWWDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + E++ N + + +A + L +K V + D Sbjct: 230 TEKLQFASLSETGGTVGELL--NSAMDPSIDFEDLATIRKMWPGKLAIKGVQ---TVADA 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 G+ ++ GG R +L + A+ E + Sbjct: 285 RKLADLGVDAIVLSNHGGRQLDRAPVPFELLPSV-----------------AKEVGQELE 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 I G+RNG DI+ ++ LGA + +L M + V I L ++ +M LL Sbjct: 328 IIVDTGIRNGADIVAAMALGADFTLIGRAYLYGLMAGGREGVDRTIAILSEQVERTMKLL 387 Query: 320 GTKRVQEL 327 V EL Sbjct: 388 QVSNVAEL 395 >gi|126730557|ref|ZP_01746367.1| dehydrogenase, FMN-dependent family protein [Sagittula stellata E-37] gi|126708723|gb|EBA07779.1| dehydrogenase, FMN-dependent family protein [Sagittula stellata E-37] Length = 393 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 109/366 (29%), Gaps = 81/366 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 ++ N++ + + R L ++ + +VE G++ + P I+ M + Sbjct: 33 SGSLNANRQSYGEIFFKPRTLRDVGKRQ--QAVELFGRRHAAPFGIAPM---GAAALMGF 87 Query: 76 NRN-----------------------LAIAAEKTKVAMAVG------SQRVMFSDHNAIK 106 + + L E T G + D A Sbjct: 88 DADVAMARAAQAAGVPFILTSAALTPLERVREATGTGWFAGYLPADRERMGALVDRVANA 147 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------------ADGLFLHLN 154 +E+ + +N L F V +L A L+ H Sbjct: 148 GYEVLVVTADVPVPAN-REQNLRSGFSVPLRLTPSLLLDGLMHPHWLVSTAARTLWCHGV 206 Query: 155 PLQEII------------QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 P E Q + +A + PL++K + L+ D Sbjct: 207 PHFENFSASRGASMLAGPQAPDTSRARLTWDDLAWVRQRWSGPLIVKGI---LAPDDAVA 263 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G ++ GG + +L + + Sbjct: 264 ARQAGADGVIVSNHGGRQLDGAVAP------------------LQALPSIVSVAGDMTVM 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GGLR G D+LK++ LGA L PFL A+ V AI+ L +E + LLG Sbjct: 306 IDGGLRRGTDVLKALALGADFVFLGRPFLYAAALAGEAGVAHAIDLLSQEIDRDLALLGC 365 Query: 322 KRVQEL 327 + L Sbjct: 366 PDIATL 371 >gi|148255844|ref|YP_001240429.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Bradyrhizobium sp. BTAi1] gi|146408017|gb|ABQ36523.1| Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Bradyrhizobium sp. BTAi1] Length = 378 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 108/330 (32%), Gaps = 39/330 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ D+ R L +VD SVE G+++ PL+++ + + Sbjct: 49 AETETTLRRNRMALDEIAFRPRVL--RDVSKVDASVERFGRRMRLPLVMAPV-----GAL 101 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E + A A + S+ ++ E A + G D+ Sbjct: 102 EIFDPAGAAAVARGAGRFGAAHMLSSVSEPGLERTAEAAPDALRIFQLYVRGDDAFVEDY 161 Query: 133 GVQKAHQAVHVL-----GADGLFLHLNPLQEIIQPNGNTNFAD------LSSKIALLSSA 181 + + A + + ++ + + L+ Sbjct: 162 VSRAVANSYTAFCLTVDTAHYSRRERDIAKRYVRESRLRATGGDHQKALSWHTVKLIKDK 221 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +PL++K + ++ D + + G+ + ++ GG + +I Sbjct: 222 FKLPLIIKGIA---TAEDAHIAVDHGVDWIYVSNHGGRQLDHGRGAMHVLPEI------- 271 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDA 300 A+ + GG G DI+K+I GA L G+ A D Sbjct: 272 ----------VAAVNGRAKIMVDGGFCRGTDIVKAIACGADLVGVGRLQCWALAAAGEDG 321 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +V +E L E I ++ LLG EL + Sbjct: 322 IVRMLELLEDEVIRTLGLLGLASFAELNTS 351 >gi|332522921|ref|ZP_08399173.1| L-lactate oxidase [Streptococcus porcinus str. Jelinkova 176] gi|332314185|gb|EGJ27170.1| L-lactate oxidase [Streptococcus porcinus str. Jelinkova 176] Length = 389 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 106/347 (30%), Gaps = 60/347 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L F+ V F G L+ P++++ + Sbjct: 51 AGDTFTLHENIRSFNHKLIVPHGLKG--FENPSTEVTFDGDTLTSPIIMAPVA------A 102 Query: 73 ERINRNLAIAAEKTKVAMA-----VGSQR------VMFSDHNAIKSFELRQYAPHTV--- 118 ++ A V S + + ++ F+ + Sbjct: 103 HKLANEQGEVASAKGVKEFGTIYTTSSYSTTDLPEISQALGDSPHWFQFYYSKDDGINRH 162 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + P+G D Sbjct: 163 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 220 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 221 KSAKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 277 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G I K++ GA L Sbjct: 278 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHIFKALASGADL 320 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 L P + AM S E L E + M L GTK + ++ Sbjct: 321 VALGRPVIYGLAMGGSVGTKQVFEHLNDELKMVMQLAGTKTIDDIKH 367 >gi|119387399|ref|YP_918433.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Paracoccus denitrificans PD1222] gi|119377974|gb|ABL72737.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Paracoccus denitrificans PD1222] Length = 363 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 23/164 (14%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + A I L S +P+LLK + +S+ D E + G ++ GG + Sbjct: 211 GLMDAAPRWEDIGWLKSQTRLPVLLKGI---MSAHDAERAVAVGADGVIVSNHGGRALDG 267 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + T +L +AR + GG+R G D LK++ LGAS Sbjct: 268 LPA------------------TAEALPVVARAIAGRVPVLCDGGIRRGTDALKALALGAS 309 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + P + A+ + V + LR E V+M L G + + Sbjct: 310 AVLIGRPQIHALAVGGAAGVAHMLTILRAELEVAMALTGRRDLA 353 >gi|32034278|ref|ZP_00134489.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209311|ref|YP_001054536.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae L20] gi|190151208|ref|YP_001969733.1| L-lactate dehydrogenase (cytochrome) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250899|ref|ZP_07337091.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252765|ref|ZP_07338926.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246784|ref|ZP_07528850.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248925|ref|ZP_07530935.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251121|ref|ZP_07533044.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253538|ref|ZP_07535407.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255767|ref|ZP_07537569.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257954|ref|ZP_07539707.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260219|ref|ZP_07541927.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262349|ref|ZP_07543996.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264558|ref|ZP_07546141.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|166990698|sp|A3N3E5|LLDD_ACTP2 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494963|sp|B3GZA5|LLDD_ACTP7 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|126098103|gb|ABN74931.1| L-lactate dehydrogenase (cytochrome) [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189916339|gb|ACE62591.1| L-lactate dehydrogenase (cytochrome) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648415|gb|EFL78610.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650249|gb|EFL80413.1| L-lactate dehydrogenase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852255|gb|EFM84494.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854536|gb|EFM86729.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856853|gb|EFM88986.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858986|gb|EFM91030.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861230|gb|EFM93222.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863501|gb|EFM95431.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865666|gb|EFM97546.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867965|gb|EFM99794.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870087|gb|EFN01848.1| L-lactate dehydrogenase [cytochrome] [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 381 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 124/372 (33%), Gaps = 79/372 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + ++RN D L R L ++D +E G+KL+ P +++ + G R Sbjct: 31 SERTLERNVTDLADLALRQRVLK--DMSQLDTEIELFGEKLAMPAVLAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL- 123 A AAE + + + + + L R + H + + Sbjct: 88 GEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAA 147 Query: 124 --------------GAVQLNYDFGV----QKAHQAVHVL--------------------- 144 GA + G+ ++ +A+ + Sbjct: 148 GCSTLVFTVDMPTPGARYRDRHSGMSGDYKEIRRALQAVTHPFWAWDVGIKGKPHTLGNV 207 Query: 145 -GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + L+ + N + + + + + D P+++K + L D + Sbjct: 208 SAYTGKAVGLDDYVVWLGENFDPSISW--KDLEWIRDFWDGPMVIKGI---LDPEDAKDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG + + +L +A + + + Sbjct: 263 VRFGADGIVVSNHGGRQLDGA------------------LSSARALPSIADAVKGDIKIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+DI++ + LGA L F+ V ++ +KE V+M L Sbjct: 305 ADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSN 364 Query: 322 KRVQELYLNTAL 333 +++ ++ + + Sbjct: 365 QKISDITRDALV 376 >gi|94993734|ref|YP_601832.1| L-lactate oxidase [Streptococcus pyogenes MGAS10750] gi|94547242|gb|ABF37288.1| L-lactate oxidase [Streptococcus pyogenes MGAS10750] Length = 395 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKVAMA-----VGSQR---------VMFSDHNAIKSFELRQYAPHTV 118 ++ A + S + + + + + + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGETPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|325917860|ref|ZP_08180036.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas vesicatoria ATCC 35937] gi|325535906|gb|EGD07726.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas vesicatoria ATCC 35937] Length = 386 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 115/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADIALRQRVL--RNMSDLSLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGK 200 Query: 164 ---------GNTNFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIE 201 + L I L++ D + K++ L D Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPDDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A + + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGQLK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A V + + KE V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLGLIEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 GT + E+ Sbjct: 363 GTHSIAEI 370 >gi|112489856|pdb|2A7N|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera Of (S)- Mandelate Dehydrogenase gi|112489857|pdb|2A7P|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera Of (S)-Mandelate Dehydrogenase In Complex With Its Substrate 3-Indolelactate gi|112489859|pdb|2A85|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera Of (S)-Mandelate Dehydrogenase In Complex With Its Substrate 2-Hydroxyoctanoate gi|281500758|pdb|3GIY|A Chain A, Crystal Structures Of The G81a Mutant Of The Active Chimera Of (S)-Mandelate Dehydrogenase And Its Complex With Two Of Its Substrates Length = 380 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 106/344 (30%), Gaps = 55/344 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ F W + L + E LGK+ S PLLI T N + Sbjct: 31 AEDEYGVKHNRDVFQQWRFKPKRL--VDVSRRSLQAEVLGKRQSMPLLIGP-TALNGALW 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 + + LA AA K + + + M + A + F+L L A+ Sbjct: 88 PKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIHREIAQGMVLKALH 147 Query: 128 LNYDFGVQKAHQAVHVLGADGL--------FLHLN---------------PLQEIIQPNG 164 Y V AV+ L FL L +Q + Sbjct: 148 TGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQ 207 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + L LL+K + LS+ D + + G ++ GG Sbjct: 208 MDASFNW-EALRWLRDLWPHKLLVKGL---LSAEDADRCIAEGADGVILSNHGGRQL--- 260 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 D I P+ + + G R G DI+K++ LGA Sbjct: 261 ---------------DCAIS-PMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAV 304 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L L A V + L+ + ++ +G + L Sbjct: 305 LLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSL 348 >gi|167584181|ref|ZP_02376569.1| dehydrogenase, FMN-dependent family protein [Burkholderia ubonensis Bu] Length = 392 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N+ FD++ L+ R L ++S + +VE G++ + P I+ M G N Sbjct: 40 AEDNRTLDDNRAVFDEYGLLTRVLRDVSRRQ--QTVELFGQRFASPFGIAPM-GINALST 96 Query: 73 ERINRNLAIAAEKTKV-AMAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ + ++ GS + + A ++ + + Sbjct: 97 YRGDIVLARAAKAAGIVSIMSGSSLIPLEEVAEAAPGTWFQAYIPGDHARISALLERIAR 156 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++I+ V N + V+ + + A L H Sbjct: 157 AGYRTLVITVDIPVSANRENNVRAGFSTPLRPSLRLCWDGLTRPRWLLGTFARTLAAHGM 216 Query: 155 PLQE---------IIQPNGNTNFADL----SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ +A + L++K + LS D Sbjct: 217 PHFENSFATRGAPILSANVLRDFSARDHLNWEHLARIRQQWKGELIIKGI---LSVEDAV 273 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + +E Sbjct: 274 IAREAGADGIILSNHGGRQLDGATSPMRILRDV-----------------VQAMGSEYPV 316 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI L++E +M ++G Sbjct: 317 MVDSGFRRGADVLKALALGARMVFVGRPFNYAAAVAGEAGVTHAIRLLQEEIDRNMAMVG 376 Query: 321 TKRVQELYLNTALIRHQ 337 EL + LIR + Sbjct: 377 ANGCDEL-TSDLLIRRR 392 >gi|86741103|ref|YP_481503.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] gi|86567965|gb|ABD11774.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. CcI3] Length = 406 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + S + PLLLK + G + + ++ G+ ++ GG + + D+ Sbjct: 251 WEDVERIRSLWEGPLLLKGLMRG---DECDRLVELGVDGVVVSNHGGRQLDGVPATIDIL 307 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ GG+R G D++K++ LGA+ + P+L Sbjct: 308 PEV-----------------VDAAARRLTVFLDGGVRRGNDVVKALALGAAGVFVGRPYL 350 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +A V+ IE LR EF +M LLG V +L + Sbjct: 351 YGLAAGGEAGVLRMIELLRVEFDHAMALLGAATVADLDRS 390 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 + + RN+ FD R L +++ D S G++LS P++++ TG Sbjct: 32 AGDEVSLRRNRTAFDRIEFRPRPLADVATR--DLSTTVFGERLSMPIMLAP-TG 82 >gi|167841290|ref|ZP_02467974.1| putative L-lactate dehydrogenase [Burkholderia thailandensis MSMB43] Length = 381 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 104/363 (28%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFQKIKLRQRV--GVDISDRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS-------FELRQYAPHTVLISNL-- 123 I A AA + V + + + D A S + +R A LI Sbjct: 91 EILA--ARAARRFGVPFTLSTMSICSIEDIVAHASGPFWFQLYMMRDRAFIERLIGRASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P I Sbjct: 149 AGCPALVLTMDLQVAGQRHKDVKNGLSTPPRITLPNLLDMMRKPRWCIGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L D Sbjct: 209 IVGHVKGVTDMSSLDSWTREQFDPAIGWRDVEWVRQRWSGKLIVKGV---LDPDDAIRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 +G ++ GG + + +L + + Sbjct: 266 DAGADAIVVSNHGGRQLDGA------------------MSSVEALPAIVEAAGKRVEVWL 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK++ LGA + FL A + + ++E + +E +M L G Sbjct: 308 DGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEEGALRSLELIARELDTTMALCGCT 367 Query: 323 RVQ 325 ++ Sbjct: 368 DIR 370 >gi|119716212|ref|YP_923177.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nocardioides sp. JS614] gi|119536873|gb|ABL81490.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nocardioides sp. JS614] Length = 356 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 107/336 (31%), Gaps = 49/336 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + L+ R L +V+ SV LG P ++ T + Sbjct: 35 ARDSLTAGEAVAAWRAVRLLPRVLH--DVTQVETSVSLLGHPAQVPWGVAPST---LQRA 89 Query: 73 ERINRNLAIAAEKT--KVAMAVGSQ--RVMFSDHNAIKSFELRQYAP----------HTV 118 + LA+A M V S + L+ Y P Sbjct: 90 VHPDGELAMARACAAAGSVMVVSSNAGTAFSEIGGTGVHWWLQAYLPADRTLAGPMLDRA 149 Query: 119 LISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + AV L D V A + L ++ P + QP Sbjct: 150 VAAGARAVVLTVDTPVVGTKYASPGTALVWETVDPALLRVNFEPGYD-EQPGAEKALDLG 208 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I +++ +P+++K V L D ++G ++ GG R Sbjct: 209 PHDIGWVAARTGLPVVVKGV---LRPEDALRCAQAGAGAVWVSNHGGRQLDRSA------ 259 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T L ++ ++A+ GGLR G+D++ ++ LGA L Sbjct: 260 ------------STAACLPDVVDAVGDQAEVYVDGGLRTGLDVVAALALGARAVFLGRSP 307 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L +D ++ V + L ++ + ++ L G + + Sbjct: 308 LLALLDGAEGVARLHQELLEQTVETLRLAGCRTPAD 343 >gi|319408065|emb|CBI81719.1| L-lactate dehydrogenase [Bartonella schoenbuchensis R1] Length = 383 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 113/375 (30%), Gaps = 81/375 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + EVD S + + LS P++++ + G Sbjct: 29 AYAEETMQRNCRDLHALTLRQRILKHVG--EVDLSTQIFDQILSMPIVLAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA + + S V F+L + L Sbjct: 86 RRGEVKAARAAVAKGIPFTLSSVSVCSIAEVQTAVGDAFWFQLYVLKDRGFMRDVLERSW 145 Query: 128 LNYDFGVQKAHQAVHVL--GADGLFLHL----------NPLQEIIQP--------NGNT- 166 + GV+ V + GA H LQ ++ P G Sbjct: 146 VA---GVRTLVFTVDMPVPGARYRDAHSGMSGPYAKLRRMLQAVVHPHWAWNVGVMGRPH 202 Query: 167 ----------------NFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 ++ + + ++LK + L D Sbjct: 203 DLGNVSTYLQKKIKLEDYIGWLDANFDPSIAWRDLQWIRDFWKGQIILKGI---LDPRDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + T +L +A + Sbjct: 260 REAVQFGADGIVVSNHGGRQLDGV------------------LSTVRALPAIAEAVKGDL 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+R+G+D+++ + GA + F A V ++ KE V+M L Sbjct: 302 TILADSGVRSGLDVVRMVAQGADAAMIGRAFAYALAATGEKGVAHLLDLFAKEMRVAMTL 361 Query: 319 LGTKRVQELYLNTAL 333 +G + ++E+ + Sbjct: 362 IGARTIKEITRENLV 376 >gi|313891322|ref|ZP_07824940.1| L-lactate oxidase [Streptococcus pseudoporcinus SPIN 20026] gi|313120389|gb|EFR43510.1| L-lactate oxidase [Streptococcus pseudoporcinus SPIN 20026] Length = 389 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L F+ V F G L+ P++++ + Sbjct: 51 AGDTFTLHENIRSFNHKLIVPHGLKG--FENPSTEVTFDGDTLTSPIIMAPVA------A 102 Query: 73 ERINRNLAIAAEKTKVAMA-----VGSQR------VMFSDHNAIKSFELRQYAPHTV--- 118 ++ A V S + + ++ F+ + Sbjct: 103 HKLANEQGEVASAKGVKEFGTIYTTSSYSTTDLPEISQALGDSPHWFQFYYSKDDGINRH 162 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + P+G D Sbjct: 163 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 220 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 221 KSAKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 277 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G I K++ GA L Sbjct: 278 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHIFKALASGADL 320 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GTK + + L N Sbjct: 321 VALGRPVIYGLAMGGSVGTKQVFEHLNDELKMVMQLAGTKTIDDVKHFKLRHNPY 375 >gi|241895457|ref|ZP_04782753.1| possible (S)-2-hydroxy-acid oxidase [Weissella paramesenteroides ATCC 33313] gi|241871431|gb|EER75182.1| possible (S)-2-hydroxy-acid oxidase [Weissella paramesenteroides ATCC 33313] Length = 364 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 113/335 (33%), Gaps = 48/335 (14%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N K FD ++ L + D SV+F L+ P++++ + +E + Sbjct: 47 YKNNIKAFDKKVIVPGVL--RDVENPDTSVDFQDMHLTAPIIMAPVAAHGLAHVEGEKYS 104 Query: 79 LAIAAEKTKVAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--------G 124 A + A D +A + F+ + + + Sbjct: 105 AKGVANFGSIFTASSFASTTLEDIREAGGQDANQWFQFYMSKDNGINDQIIATAERNGSK 164 Query: 125 AVQLNYDF---GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA----- 176 A+ L D G ++A + H + + + Q + + + K+A Sbjct: 165 AIVLTADATLGGNREADKRNHFTFPLAMPI-VAAYQSGVGQTMDAVYKSAKQKLAPRDVE 223 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 ++S D+P+ +K V S+ D+ L +G R + GG + Sbjct: 224 YIASHTDIPVYVKGVQ---SAEDVYRSLDAGARGIWVTNHGGRQLDGGPAA--------- 271 Query: 237 VFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA- 294 SLE +A A + G+R G + K++ GA L + P + Sbjct: 272 ---------FESLEIVAEAVNGRAPVVFDSGVRRGQHVFKALASGADLVAIGRPVIYGLS 322 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + V + E + M L GT+ + ++ Sbjct: 323 LGGATGVEQVFNFFKDELALVMQLAGTQTIDDVRK 357 >gi|224031779|gb|ACN34965.1| unknown [Zea mays] Length = 193 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 23/163 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +P+LLK + +++ D +++G ++ G + Sbjct: 41 WKDVEWLKSITSLPILLKGI---VTAEDARKAVEAGAAGLIVSNHGARQLDYAPA----- 92 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 T +LE + + GG+R G D+LK++ LGA + P Sbjct: 93 -------------TISALEEVVKAVAGAVPVLVDGGVRRGTDVLKALALGAKAVMVGRPV 139 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 F A IE L KE ++M L G + V E+ Sbjct: 140 FFGLAARGEAGARHVIEMLNKELELAMALCGCRSVAEVTRAHV 182 >gi|71082985|ref|YP_265704.1| l-lactate dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] gi|71062098|gb|AAZ21101.1| l-lactate dehydrogenase [Candidatus Pelagibacter ubique HTCC1062] Length = 383 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + P LK V +S D + + G I+ GG S Sbjct: 238 WKDAEYCVKRWNGPFALKGV---MSIEDAKRAIDIGCTAIMISNHGGRQLDGSRSP---- 290 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 F ++ A ++ + I GG+R G +LK++ GA+ FL Sbjct: 291 ------FDQ-----VNAIREA--VGDKLEIILDGGVRRGTHVLKALAAGATACSFGKMFL 337 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V ++++ E +M L+G K ++EL + + R Sbjct: 338 FALSAGGQPGVERLLQNMHDEINRNMVLMGCKTLKELDASKLIYR 382 >gi|27379934|ref|NP_771463.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27353087|dbj|BAC50088.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 377 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 113/331 (34%), Gaps = 41/331 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ D+ R L +VD SVE G+++ P++++ + G ++ Sbjct: 48 AETETTMRRNRMALDEIAFRPRVL--RDVRKVDGSVEQFGRRMRLPVVLAPV--GALEIF 103 Query: 73 ERINRN-LAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFELRQYAPHTVLISNLGA 125 + +A AA A + S +A++ ++L + + Sbjct: 104 DPDGAASVARAAGTFGAAHMLSSVSEPGLEKTAAAAPDALRLYQLYVRGDDAFVADVVSR 163 Query: 126 VQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL-LSS 180 + + V AH + ++ + L+ G L + + Sbjct: 164 AEKHAYAAFCLTVDTAHYSRRERDIAKRYVRESRLRAT----GGDFQKGLEWRTVKMIKD 219 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +PL+LK + ++ D + L G+ + ++ GG + +I Sbjct: 220 KFKIPLILKGIA---TAEDALIALDHGVEWIYVSNHGGRQLDHGRGAMHVLPEI------ 270 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSD 299 A+ + GG G DI+K+I GA L G+ A Sbjct: 271 -----------VEAVKGRAKIMVDGGFGRGTDIVKAIAAGADLVGIGRLQCWALAAAGEA 319 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V +E L E + + LLG E+ + Sbjct: 320 GVTRMLELLEDEVLRCLGLLGATSFAEVNKS 350 >gi|37927400|gb|AAP69813.1| putative glycolate oxidase [Vitis vinifera] Length = 156 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 23/163 (14%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + L + +P+L+K V L++ D + + G ++ G + + Sbjct: 1 KDVKWLQTITKLPILVKGV---LTAEDARIAVNVGAAGIIVSNHGARQLDYVPA------ 51 Query: 233 DIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 T ++LE + GG+R G D+ K++ LGAS + P + Sbjct: 52 ------------TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 99 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A D V A++ LR EF ++M L G + ++E+ N + Sbjct: 100 YSLAADGEAGVRKALQMLRDEFELTMALSGCRSLKEISRNHIM 142 >gi|315498313|ref|YP_004087117.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] gi|315416325|gb|ADU12966.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Asticcacaulis excentricus CB 48] Length = 365 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 22/175 (12%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P Q + I + S +P++LK + ++ D + + G+ ++ Sbjct: 206 PGQSRVFDGLMKTAPGWDD-IEWVLSEARLPVILKGI---MAPEDADHACRMGVHGLIVS 261 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + + + +PT ++ R + GG+R G D+ Sbjct: 262 NHGGRVLDTLPAAIEA------------LPTVAAVVAGR-----VPILLDGGIRRGSDVF 304 Query: 275 KSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 K++ LGAS + P+++ A V AI +LR+E V M L GT + + Sbjct: 305 KALALGASAVLVGRPYVQALAAAGPLGVAHAIRTLREELEVVMALSGTPTLDRIR 359 >gi|325964606|ref|YP_004242512.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Arthrobacter phenanthrenivorans Sphe3] gi|323470693|gb|ADX74378.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Arthrobacter phenanthrenivorans Sphe3] Length = 447 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 109/362 (30%), Gaps = 69/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D L + +D S E LGK P+ I+ TG M Sbjct: 98 AEGEITLRRARQAFLDIEFRPGIL--RNVSAIDLSTEILGKPSRLPVGIAP-TGFTRMMQ 154 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFEL-----RQYA------- 114 + AAE + + + D N F+L R+ + Sbjct: 155 SEGEYAGSQAAEAAGIPYTLSTMGTASIEDVAAAAPNGRNWFQLYLWTDRERSLELIERA 214 Query: 115 ------------PHTVLISNLGAVQLNYDFGVQKAHQAV----------------HVLGA 146 V + L V+ + V L Sbjct: 215 AKAGNDTLMVTVDTAVAGARLRDVRNGMTIPPALTLKTVLDASYRPAWWFNFLTHEPLTF 274 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L + + ++I + + L L++K + + D + Sbjct: 275 ASLSRYTGTVADLINSMFDPTLT--FEDLDWLRETWKGKLVVKGIQ---TVEDARRVVDH 329 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L ++ F T +A + G Sbjct: 330 GADGIVLSNHGGRQLDRAPIPFHLLPEVKQAF------TAD--------NTDAAIMLDTG 375 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 + +G DI+ ++ LGA + +L M A V ++ L K+ +M LLG R+ Sbjct: 376 IMSGADIVAALALGADFTLVGRAYLYGLMAGGRAGVDRMLQILEKDMARTMALLGVSRIS 435 Query: 326 EL 327 EL Sbjct: 436 EL 437 >gi|170057203|ref|XP_001864379.1| glycolate oxidase [Culex quinquefasciatus] gi|167876701|gb|EDS40084.1| glycolate oxidase [Culex quinquefasciatus] Length = 238 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +P+++K + L+ D + + G + ++ G + ++ Sbjct: 88 WDDVEWLLKLTKLPVIVKGI---LTKEDALIAVDRGAQGIWVSNHGARQVDSEPATIEVL 144 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + I GG+ G D+ K++ LGA + + P L Sbjct: 145 PEI-----------------VAAVADRIPIIIDGGVTQGTDVFKALALGAKMVCIGRPAL 187 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A++ V ++ L+KE M + G + ++ Sbjct: 188 WGLAVNGQQGVENVLDILKKELDNVMAIAGCHSIADI 224 >gi|254369295|ref|ZP_04985307.1| hypothetical protein FTAG_00257 [Francisella tularensis subsp. holarctica FSC022] gi|157122245|gb|EDO66385.1| hypothetical protein FTAG_00257 [Francisella tularensis subsp. holarctica FSC022] Length = 380 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L ++ + + I Sbjct: 267 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAISDKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 368 Query: 322 KRVQ 325 + Sbjct: 369 LDLN 372 >gi|50913712|ref|YP_059684.1| L-lactate oxidase [Streptococcus pyogenes MGAS10394] gi|50902786|gb|AAT86501.1| L-lactate oxidase [Streptococcus pyogenes MGAS10394] Length = 395 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ ++ + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDHKVPIVFDSGIRRGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|78045666|ref|YP_361841.1| L-lactate dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926763|ref|ZP_08188071.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas perforans 91-118] gi|85540710|sp|Q3BZH2|LLDD_XANC5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|78034096|emb|CAJ21741.1| L-lactate dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542844|gb|EGD14299.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Xanthomonas perforans 91-118] Length = 388 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 115/371 (30%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADVALRQRVL--RNMSDLRLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGR 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 258 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 E + +A G+R+G+D+++ + LGA L F+ A V + + KE V+M Sbjct: 300 ELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAAGQAGVENLLTLIEKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L GT + E+ Sbjct: 360 TLTGTHSIAEI 370 >gi|213052717|ref|ZP_03345595.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 187 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 33/184 (17%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 5 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 61 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 62 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 103 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 +D+++ I LGA L +L A V ++ + KE V+M L G K + E+ Sbjct: 104 LDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLTGAKSISEISG 163 Query: 330 NTAL 333 ++ + Sbjct: 164 DSLV 167 >gi|300784029|ref|YP_003764320.1| L-lactate dehydrogenase [Amycolatopsis mediterranei U32] gi|299793543|gb|ADJ43918.1| L-lactate dehydrogenase [Amycolatopsis mediterranei U32] Length = 403 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 70/376 (18%), Positives = 120/376 (31%), Gaps = 84/376 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ + L +VD + E LG+ + P + TG M Sbjct: 59 AELEDSLLRARQAYRRVEFHPNVLRG--VSDVDTTREILGQTSALPFAFAP-TGFTRMMQ 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ-RVMFSD-----HNAIKSFELRQYAPHTVLISNLGAV 126 R +A AE+ + + + + D A K F+L + H + Sbjct: 116 HEGERAVARVAERNGIPVGLSTMATTSIEDLAEASPGARKWFQLYVWRDHGAGEDLMNRA 175 Query: 127 Q--------LNYDFGVQKAHQAVHVLGADGL--FLHLNPLQEIIQPNGNTNFADLSSKI- 175 L D V A + V + L L + G T+ A + + Sbjct: 176 WAAGYDTLMLTVDTPVAGA-RLRDVRNGLTIPPALTLKTFLD-----GATHPAWWFNLLT 229 Query: 176 ----------------ALLSSAMDVP-----------------LLLKEVGCGLSSMDIEL 202 A L + + P L++K V + D Sbjct: 230 TEPLTFASLNQFGGTVAELLNKLFDPTLNYDDLDWVRRTWPGKLVVKGVQ---NVDDARD 286 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE--MARPYCNEAQ 260 +K G ++ GG R PTPL L + A+ Sbjct: 287 VVKHGADAVLLSNHGGRQLDRA-------------------PTPLELLPAVLDELQGGAE 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLL 319 G+ +G DI+ +I GA + FL M + V ++ LR E + +M LL Sbjct: 328 VWIDTGILSGGDIVAAIARGADAVLIGRAFLYGLMAGGERGVQRCVDILRTEMVRTMQLL 387 Query: 320 GTKRVQELYLNTALIR 335 G + + +L + A +R Sbjct: 388 GVRTLADLKPSHATLR 403 >gi|19745559|ref|NP_606695.1| L-lactate oxidase [Streptococcus pyogenes MGAS8232] gi|306827918|ref|ZP_07461185.1| L-lactate oxidase [Streptococcus pyogenes ATCC 10782] gi|19747681|gb|AAL97194.1| putative lactate oxidase [Streptococcus pyogenes MGAS8232] gi|304429837|gb|EFM32879.1| L-lactate oxidase [Streptococcus pyogenes ATCC 10782] Length = 393 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 106 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 107 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 166 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 282 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 325 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 379 >gi|326385335|ref|ZP_08206980.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Novosphingobium nitrogenifigens DSM 19370] gi|326210141|gb|EGD60913.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Novosphingobium nitrogenifigens DSM 19370] Length = 378 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 124/374 (33%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++RN+ L R L E+ EVD S + G+ L+ P+ ++ + G Sbjct: 29 AYAEQTLERNQSDLHAIGLRQRVLKEVG--EVDLSTKLFGEDLAMPVALAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGAVQ 127 R A AAE + + S V + A ++ F+L + + L Sbjct: 86 RRGEVQAAQAAEARGIPFTLSSVSVCSIEEVARQTTRPIWFQLYVLRDRGFMRNVLDRAW 145 Query: 128 --------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 D V A + G + LQ ++ P+ Sbjct: 146 AAGVRTLVFTVDMPVPGARYRDAHSGMSGPRAASRRI--LQAMLHPHWAWNVGVMGRPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + ++LK + L D Sbjct: 204 LGNVSAYLQKKTGLEDYVGWLGANFDPGIGWKDLQWIRDTWKGAMVLKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQ 260 ++ G ++ GG + + T +L +A + + Sbjct: 261 EAVRFGADGIVVSNHGGRQLDGV------------------LSTARALPPIANAVKGDIR 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLL 319 +A G+R+G+D+++ + LGA L F + A VA + +L E V+M L Sbjct: 303 LLADSGIRSGLDVVRMVALGADCVLLGRAFAYALAAAGGAGVANLLNLIDKEMRVAMTLT 362 Query: 320 GTKRVQELYLNTAL 333 G +R+ +L ++ + Sbjct: 363 GARRISDLSPDSLV 376 >gi|121535487|ref|ZP_01667296.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosinus carboxydivorans Nor1] gi|121305906|gb|EAX46839.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermosinus carboxydivorans Nor1] Length = 337 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 38/317 (11%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + + L R + + + S LG LS P++ +++ G M + Sbjct: 48 NVEALAGFRLNLRTIHNVHTPK--LSCRILGLDLSLPVIAAAIGGIAMNMNGAMTEEEYA 105 Query: 82 AA------EKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNLGAVQLNYDFGV 134 AA + + M + + + L P V+L Sbjct: 106 AAIVAGCRQAGTIGMTGDGPKPEVFEAGLKAMAAGLGPAIPIIKPRDVDKIVELAQRAAA 165 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 A + A L N Q+ + P ++A + +P ++K + Sbjct: 166 AGAPAFGIDIDAAALINMTNAGQK-VGPKTK-------DELAYIKQHTSIPFIVKGI--- 214 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 ++ + E +G+ ++ GG + + I Sbjct: 215 MTPDEAEACCAAGVDAIVVSNHGGRALDHTPGTAQVLPYIAET----------------- 257 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFI 313 + GG+R+G DILK + LGA + P A+ VA + E Sbjct: 258 VKGRITILVDGGIRSGADILKMLALGADAVLIGRPLAIGAVGGGADGVATVLNKFAGELR 317 Query: 314 VSMFLLGTKRVQELYLN 330 +M L GT V + + Sbjct: 318 AAMVLTGTADVAAVKED 334 >gi|323358450|ref|YP_004224846.1| L-lactate dehydrogenase [Microbacterium testaceum StLB037] gi|323274821|dbj|BAJ74966.1| L-lactate dehydrogenase [Microbacterium testaceum StLB037] Length = 418 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 106/367 (28%), Gaps = 82/367 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + +DR ++ F+D L + EVD S E LG + P I+ Sbjct: 59 AEGELSLDRARRAFEDVEFHPDILRPAN--EVDTSCEILGGPSALPFGIAPTGFTRLMQT 116 Query: 65 --------------------TGGNN-----KMIERINRN---------------LAIAAE 84 T G K + RN L A Sbjct: 117 EGETAGASAAAAAGIPFTLSTLGTTSIEGVKAANPVGRNWFQLYVMKQREISYGLVERAA 176 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 K + V + + F + +++ + YDF Sbjct: 177 KAGFDTLQFTVDTPIAGARLRDKRNGFSIPPQLTVGTIVNAIPRPWWWYDF------LTT 230 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L L + E++ + + + ++ L++K V + D Sbjct: 231 PKLEFASLSTTGGTVGELLNAAMDPTIS--YDDLDIIRGMWPGKLVVKGVQ---NVQDAA 285 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G+ ++ GG R L + R +A Sbjct: 286 RLVDLGVDGIVLSNHGGRQLDRAPIPFRLLPHV-----------------VREVGKDATV 328 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 + G+ NG DI+ SI LGA + +L M + V I LR E +M LLG Sbjct: 329 MVDTGIMNGADIVASIALGAKFTLIGRAYLYGLMAGGREGVDRTIAILRSEIERTMTLLG 388 Query: 321 TKRVQEL 327 + EL Sbjct: 389 VSSLAEL 395 >gi|308813437|ref|XP_003084025.1| COG1304: L-lactate dehydrogenase (ISS) [Ostreococcus tauri] gi|116055907|emb|CAL57992.1| COG1304: L-lactate dehydrogenase (ISS) [Ostreococcus tauri] Length = 400 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 75/384 (19%), Positives = 120/384 (31%), Gaps = 83/384 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------ 66 + + R+ FD+ H + +VD V FLG + + G Sbjct: 37 ADDERALQRHSSAFDELEF-HPSTCR-GVSDVDTRVSFLGHNNTECVFPCPTAGHALWAP 94 Query: 67 -----GNNKMIERINR-------------NLAI--------------------------- 81 + NR ++A Sbjct: 95 REGELASANACATSNRVFTLSTLGTRSPKDIAERVPGLNSDRKMFQVYVWKDRGLMRDVL 154 Query: 82 -AAEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF-GVQK 136 +A + VA+ + + F + + + A Y+F Q+ Sbjct: 155 ASAREAGFSSVALTTDLTWFGNRERDVRNQFSVPPKHSFKTTVDAMSAPAWTYEFLTSQR 214 Query: 137 AHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 A + L DGL P+ E + NF S D P+ LK + L Sbjct: 215 IEYALIRDLQRDGLLRDSLPIAEFATEQFDANFNW--KDAEWFRSQWDGPIALKGI---L 269 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D L G + G R LES + I S+ A Sbjct: 270 RPDDAMRALDVGYDAVWVTAHG---------ARQLESTVAP------IDVLPSIREA--V 312 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIV 314 +AQ I GG+ GVD++K++ LGA+ G+ +L + V A + L E Sbjct: 313 GEDAQVIYDGGVMRGVDVVKALALGATAVGVGKAYLYGLAAGGERGVSKAFDMLTCETKR 372 Query: 315 SMFLLGTKRVQELYLNTA-LIRHQ 337 +M LLG + V+EL L+R + Sbjct: 373 AMGLLGVRDVKELRDRGRDLVRRR 396 >gi|81319535|sp|Q6WB83|LLDD_ALCFA RecName: Full=L-lactate dehydrogenase [cytochrome] gi|33469576|gb|AAQ19817.1| putative L-lactate dehydrogenase [Alcaligenes faecalis] Length = 379 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 121/375 (32%), Gaps = 78/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L ++D S++ G+KLS P+ +S + TG + Sbjct: 29 AYAEHTLRRNVDDLAEVALRQRVLK--DMSQLDTSIDLFGEKLSMPVALSPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA+ + + S V + A + F+L + + L Sbjct: 87 RGEV---QAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALER 143 Query: 126 VQ--------LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQP------------ 162 Q D V A + G + Q ++ P Sbjct: 144 AQAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAALRRY--AQAVMHPRWAWDVGLLGRP 201 Query: 163 ----NGNT---NFADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIEL 202 N + L + L + D + K++ L D Sbjct: 202 HDLGNISRYLGKPTGLEDYMGYLGANFDPSISWKDLEWIREFWKGPMLIKGILDPDDARD 261 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQF 261 ++ G ++ GG + + + +L +A + + Sbjct: 262 AVRFGADGIIVSNHGGRQLDGV------------------LSSARALPAIADAVKGQIKI 303 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 +A G+R+G+D+++ I LGA L ++ A V + + KE V+M L Sbjct: 304 LADSGIRSGLDVVRMIALGADAAMLGRAYIYALAAAGQSGVDHLLGLIEKEIRVAMTLTS 363 Query: 321 TKRVQELYLNTALIR 335 + ++ + L+R Sbjct: 364 VSSISQI-TSELLVR 377 >gi|264679180|ref|YP_003279087.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262209693|gb|ACY33791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 375 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 107/356 (30%), Gaps = 65/356 (18%) Query: 9 HINI-VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 H+ + + N++ FD L L ++S LG+ L +PLL++ + Sbjct: 40 HLESGADQGLTLAHNRQAFDRIRLCPEPLADLSAAH--TRQSLLGQSLDWPLLLAPVA-- 95 Query: 68 NNKMIERINRNLAIAAEKTKV--AMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLG 124 + + LA A + M V + + ++ L L Sbjct: 96 -YQQLAHPEGELATARAAMAMRTGMVVSTLSSCTLEEIAQAAQAAAQELGRSGPLWFQL- 153 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLN-----------PLQEIIQPNGNTNFADL-- 171 Q + +Q +A G L ++ P E + G Sbjct: 154 YQQPTREHTLQLIRRA-EDAGYQALVWTVDAHIKRSSYPLPPGVEAVNLRGIPQQRQTGD 212 Query: 172 ------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + L +PL++K + LS+ ++ G + Sbjct: 213 LMSEHILFGSELARGAPTWDDLVWLRQQTRLPLIVKGL---LSARAAAQAVELGADAIVV 269 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVD 272 + GG + L R + GG+R G D Sbjct: 270 SNHGGRVLDTA------------------VSALEVLPAIRAATPAHIPLLMDGGVRQGTD 311 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +LK+I LGAS L P + A V + LR E ++M G + ++ Sbjct: 312 VLKAIALGASAVLLGRPQMHALAAAGMLGVAHMLHLLRAELELAMAQTGCASLDQI 367 >gi|87198797|ref|YP_496054.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Novosphingobium aromaticivorans DSM 12444] gi|87134478|gb|ABD25220.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Novosphingobium aromaticivorans DSM 12444] Length = 361 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 111/345 (32%), Gaps = 59/345 (17%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN- 68 +N V + + + + HL RAL + +D S LG++++ P++ + G Sbjct: 37 VNNVGMERTLHDDIAAWQAMHLRPRAL--VDVSHIDTSATVLGQQIAMPIMTAPFVGSTL 94 Query: 69 -NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF-------ELRQYAPHTV-- 118 + E A+AA +G++ A + R + Sbjct: 95 VDPEGEVATARGAVAAGTITTLSMMGTRPPEAVGAVASGRYWQQIYFMRDRGVVKDVIER 154 Query: 119 -LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-------------- 163 + + A+ D V A L A LF Q +P Sbjct: 155 AVAAGASALCFTVDLPVMPAFPRPMRLAAQALF------QRWQEPEHVMYAVRDYADRPM 208 Query: 164 --GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + A + + + + ++PL+LK V + + D G ++ G Sbjct: 209 GATFPDAAATWADVEWMRTLSNLPLILKGV---IRTDDAARARDHGASALIVSNHAG--- 262 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + R P +L + + + A G+R G D+L+++ LG Sbjct: 263 ---QGLRHS------------QPVAHALPAIVEAVGRDIEVYADSGIRTGADVLRALALG 307 Query: 281 ASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRV 324 A + P L V ++ L+ E M + G + Sbjct: 308 ARAVLVGRPVLWGLTTGGSQGVERVLKLLQAELAEIMAITGASSI 352 >gi|285016840|ref|YP_003374551.1| l-lactate dehydrogenase [cytochrome] protein [Xanthomonas albilineans GPE PC73] gi|283472058|emb|CBA14565.1| probable l-lactate dehydrogenase [cytochrome] protein [Xanthomonas albilineans] Length = 418 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 111/375 (29%), Gaps = 83/375 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L +D E G++L+ P+ ++ + TG + Sbjct: 61 AYAEHTLRRNVADLADIALRQRVL--RDMSALDLHTELFGERLALPVALAPVGLTGMYAR 118 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA V + + V + A F+L + A Sbjct: 119 RGEV---QAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 172 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 173 LERAKAVGVTTLVFTVDMPTPGARYRDAHSGMSGPNAALRRMLQAVAHPRWAWDVGVWGK 232 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 233 PHDLGNISAYRGHPTGLADYIGWLGANFDPSISWKDLEWIREFWTGPMVIKGI---LDPD 289 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D ++ G ++ GG + S I + Sbjct: 290 DARDAVRFGADGIIVSNHGGRQLDGVLSSTRALPAIAD-----------------AVKGK 332 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMF 317 + +A G+R+G+D+++ + LGA L F+ A V + + KE V+M Sbjct: 333 LKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLSLIEKEMRVAMT 392 Query: 318 LLGTKRVQELYLNTA 332 L G K + + ++ Sbjct: 393 LTGAKSIDAITRDSL 407 >gi|21240907|ref|NP_640489.1| L-lactate dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|81805971|sp|Q8PR33|LLDD_XANAC RecName: Full=L-lactate dehydrogenase [cytochrome] gi|21106184|gb|AAM35025.1| L-lactate dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 388 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 115/371 (30%), Gaps = 85/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADVALRQRVL--RNMSDLRLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + V + A F+L + A Sbjct: 87 RGEV---QAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV V + A N LQ + P Sbjct: 141 LERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 G ++ + + P+++K + L Sbjct: 201 PHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D ++ G ++ GG + + + +L +A Sbjct: 258 DARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 E + +A G+R+G+D+++ + LGA L F+ A V + + KE V+M Sbjct: 300 ELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAAGQAGVENLLTLIEKEMRVAM 359 Query: 317 FLLGTKRVQEL 327 L GT + ++ Sbjct: 360 TLTGTHSIADI 370 >gi|309807495|ref|ZP_07701455.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|308169260|gb|EFO71318.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] Length = 103 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 3 NDRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS 62 + RK DHI++ K + F +LI ALPE F K S P I Sbjct: 5 SQRKKDHIDLANKYY-LPHPDADFSGINLIRPALPESKISSDSIQTTFFHKIASAPFFIE 63 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHN 103 +MTGG+++ E INR LA A+K +AMA+GS ++ + Sbjct: 64 AMTGGSDESYE-INRRLAFCAKKENIAMALGSASILEKEPE 103 >gi|261868446|ref|YP_003256368.1| L-lactate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413778|gb|ACX83149.1| L-lactate dehydrogenase LctD [Aggregatibacter actinomycetemcomitans D11S-1] Length = 381 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 73/369 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L ++D +E G+KLS P +++ + G R Sbjct: 31 AEQTLKRNVNDLENIALRQRVLK--DMSQLDTQIELFGEKLSIPAILAPV-GALGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA + + + + + A K F+L + A++ Sbjct: 88 GEVQAAKAAASRNIPFTLSTVSICSIEEVAPKIDRPMWFQLYVLKDRGFMR---NALERA 144 Query: 130 YDFGVQKAHQAVHVL--GADGLFLH------LNPLQEIIQPNGNTNFAD----------- 170 G V + GA +H ++ IIQ + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRIIQGITHPFWAWDVGVKGKPHTL 204 Query: 171 ------------LSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLK 205 L I L+ D + K++ L D + + Sbjct: 205 GNVSHYMGKQIGLDDYIGWLTENFDPSISWKDLEWIREFWDGPMIIKGILDPKDAKDAVL 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I E + +A Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAE-----------------AVKGEIKILADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ I LGA + F+ V ++ +KE V+M L +++ Sbjct: 308 GIRNGLDIVRMIALGADACMIGRSFVYALGAAGQLGVENMLDIFKKEMHVAMTLTSNQKI 367 Query: 325 QELYLNTAL 333 ++ + + Sbjct: 368 SDITKDALV 376 >gi|326336184|ref|ZP_08202356.1| L-lactate dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691693|gb|EGD33660.1| L-lactate dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 391 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 111/368 (30%), Gaps = 86/368 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 N+ F+ R L + D LG+K+ FP +MT G Sbjct: 36 QATYRENETDFNPIKFRQRIL--VDMDNRTLETTLLGQKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLI 120 I ++A AA+K + M++ S + F+L R + + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDRAFMKDLIRR 147 Query: 121 S-------------------------------------NLGAVQLNYDFGVQKA--HQAV 141 + NL + +G++ + Sbjct: 148 AKEAKCSALMVTVDLQVLGNRHRDIKNGLSTPPKFTIPNLLNLSTKIPWGLRYVFGSRRW 207 Query: 142 HVLGADGLFLHLNPLQEII-QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 G +++ L + + + IA + P++LK + ++ D Sbjct: 208 TFRNIAGHAKNVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPEDA 264 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 + +K G ++ GG I T +L ++ ++ Sbjct: 265 QEAVKYGADAIIVSNHGGRQMDDT------------------ISTIKALPDIVSAVGSQT 306 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + G G ++LK+ LGA L P + V A++ L E +M Sbjct: 307 EVWIDSGFYTGQNMLKAWALGAKGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMAF 366 Query: 319 LGTKRVQE 326 G + +Q+ Sbjct: 367 SGHRNIQD 374 >gi|15889595|ref|NP_355276.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] gi|15157485|gb|AAK88061.1| L-lactate dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 382 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 117/367 (31%), Gaps = 71/367 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F L R L + + + E +G+K+S P+ +S TG Sbjct: 35 AWTESTYRANEDDFAKIKLRQRVL--VDMTDRSLATEMVGEKVSMPVALSP-TGLTGMQH 91 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS----FELRQYAPHTVLISNL---- 123 A AAE+ V + + + D ++ S F+L ++NL Sbjct: 92 ADGEMLAAKAAEEFGVPFTLSTMSICSIEDVASVTSKPFWFQL-YVMKDRDFVNNLIDRA 150 Query: 124 ---GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------- 166 G L +Q Q L +GL + I Sbjct: 151 KAAGCSALVLTLDLQILGQRHKDLR-NGLSAPPKFTPKHIWQMATRPQWCMDMARTKRRS 209 Query: 167 ---------NFADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGL 204 N +DLSS + D L ++V L D + Sbjct: 210 FGNIVGHAKNVSDLSSLSTWTAEQFDPRLSWQDVEWIKQRWGGKLILKGILDEEDARAAI 269 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + I + + Sbjct: 270 DTGADAIIVSNHGGRQLDGAHSSIAMLPKI-----------------VDAVGDRIEVHMD 312 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK++ LGA + PFL V A+E +RKE +SM L G + Sbjct: 313 GGIRSGQDVLKAVALGARGTYIGRPFLYGLGAGGKQGVTTALEIIRKELDISMALCGKRL 372 Query: 324 VQELYLN 330 + ++ + Sbjct: 373 ITDVDRS 379 >gi|227822933|ref|YP_002826905.1| L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium fredii NGR234] gi|227341934|gb|ACP26152.1| L-lactate dehydrogenase (cytochrome) protein [Sinorhizobium fredii NGR234] Length = 381 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + PL+LK + L D ++ K+G ++ GG S + Sbjct: 235 WKDVEWIKERWGGPLILKGI---LDPEDAKMAAKTGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R+G D+LK++ LGA + PFL Sbjct: 292 PKI-----------------IDAVGDQIEVHVDGGIRSGQDVLKAVALGAKGTFIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D V A++ +RKE ++M L G + + + Sbjct: 335 YGLGAMGKDGVTLALDIIRKEMDITMALCGKRSITD 370 >gi|139474327|ref|YP_001129043.1| L-lactate oxidase [Streptococcus pyogenes str. Manfredo] gi|134272574|emb|CAM30840.1| L-lactate oxidase [Streptococcus pyogenes str. Manfredo] Length = 393 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSIEITFDGDHLTSPLILAPVA------A 106 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 107 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 166 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 282 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 325 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 379 >gi|119963703|ref|YP_949020.1| L-lactate dehydrogenase [Arthrobacter aurescens TC1] gi|119950562|gb|ABM09473.1| L-lactate dehydrogenase [Arthrobacter aurescens TC1] Length = 422 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 111/367 (30%), Gaps = 79/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + R ++ F D L +D + LG++ P I+ TG M Sbjct: 73 AEEEITLRRARQAFQDIEFRPGIL--RDVSTIDLRTDILGQESRLPFGIAP-TGFTRMMQ 129 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + AAE + + + D + AP+ L + + D Sbjct: 130 SEGEYAGSQAAEAAGIPYTLSTMGTASIED--------VATAAPNGRNWFQL-YLWTDRD 180 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------FADLS 172 ++ +A G D L + ++ + N A Sbjct: 181 RSLELIERAAKA-GNDTLMVTVDTAVAGARLRDVRNGMTIPPALTIKTVLDASYRPAWWF 239 Query: 173 S-----------------KIALLSSAMDVPLL-----------LKE---VGCGLSSMDIE 201 + +A L ++M P L K V + D Sbjct: 240 NFLTHEPLTFASLSRYTGTVADLINSMFDPTLTYEDLDWLRETWKGKLVVKGIQTVEDAR 299 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG R L ++ + ++A Sbjct: 300 KVVDHGADGIILSNHGGRQLDRAPIPFHLLPEVTAAL--------------KADNSKAAV 345 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 + G+ +G DI+ ++ LGA + +L M + V I+ L K+ +M LLG Sbjct: 346 MLDTGIMSGADIVAALALGADFALIGRAYLYGLMAGGREGVDRTIQILEKDMTRTMALLG 405 Query: 321 TKRVQEL 327 ++ +L Sbjct: 406 VSKISDL 412 >gi|85710464|ref|ZP_01041528.1| L-lactate 2-monooxygenase [Erythrobacter sp. NAP1] gi|85687642|gb|EAQ27647.1| L-lactate 2-monooxygenase [Erythrobacter sp. NAP1] Length = 399 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 112/365 (30%), Gaps = 76/365 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N F W ++ R + + E D S+ G L PL ++ + G N + Sbjct: 62 CGDEHTQDTNASAFHHWGMVPRMM--VDCTERDLSINLFGMDLPTPLFMAPI-GLNGEAT 118 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + +R+ +AA + V S+ F T + L + N + Sbjct: 119 Q--DRHGDMAAARASAMTGVPFCVSTLSNDPMEDVFP---ACGDTPAMFQLYTPR-NREL 172 Query: 133 GVQKAHQAVHVLGADGLFLHLN---------PLQEIIQPN----------GNTNFADLSS 173 +A GA + + L+ L P + F + Sbjct: 173 ATSLIQRA-EKSGAKAIVVTLDTWLTGWRPRDLNASNFPQLRGKVLHNYFSDPVFRSMLD 231 Query: 174 KIAL-------------------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 K S D+P++LK + D + G+ G Sbjct: 232 KPPEEDPRAAIMLFAGIFGQVLTWEDMEFFKSVTDLPIVLKGICH---PDDAKRGIDHGA 288 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + GG + GI T L + + G+R Sbjct: 289 DAIYCSNHGGRQ------------------ANGGISTIDLLPDVVAASGDLPVLFDSGIR 330 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTKRVQEL 327 +G D +K+I LGA+ G+ P+ D A + S+ E + M + G ++ + Sbjct: 331 SGTDAIKAIALGATAVGVGRPYTYGLAIGGDKGAAWVLRSILAEADLLMAVNGYPTLEAV 390 Query: 328 YLNTA 332 A Sbjct: 391 REAGA 395 >gi|83644522|ref|YP_432957.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Hahella chejuensis KCTC 2396] gi|83632565|gb|ABC28532.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase [Hahella chejuensis KCTC 2396] Length = 372 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 68/352 (19%), Positives = 121/352 (34%), Gaps = 62/352 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-----GKKLSFPLLISSMTGG 67 ++ + N LI R L +VD S L G+ + PL+I+ Sbjct: 29 AGRERTLKENINALSQIRLISRVLRG--VSKVDISAPRLSPVQHGRTPATPLIIAPSA-- 84 Query: 68 NNKMIERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAP 115 +++++ + LA AA + +A+ + + +S ++ R Sbjct: 85 HHQLVHP-DGELATLAAANQCGAPLALSTMSDTPLETVCKQSTAPVMFQLYLYKDRARNR 143 Query: 116 HTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL----QEIIQP---NGN 165 + + A+ L D A D + Q +IQP + Sbjct: 144 DIIQQAQDAGCSALMLTVDVPRMGARLRDRRNEFDVNRYRKSADRSGEQPLIQPHNSGRS 203 Query: 166 TNFADLSSKI---------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 A ++ + A + S +PL+LK V L D E+ K + ++ Sbjct: 204 RVAAFVAEHLEPAISWTDVAWVKSQTRMPLILKGV---LHPQDAEIAQKHEVDALYLSNH 260 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG S D+ I + I GG+R+G DILK+ Sbjct: 261 GGRQLDHHVSAIDMLPHI-----------------RQRLGAAMPLIVDGGIRSGADILKA 303 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA G+ P A + V A + L + I+SM + G + ++ Sbjct: 304 LALGADAVGVGRPALWGLAAAGAQGVAAVLRQLIDDLILSMHICGCASLADI 355 >gi|58381834|ref|XP_311494.2| AGAP010455-PA [Anopheles gambiae str. PEST] gi|55242699|gb|EAA07214.2| AGAP010455-PA [Anopheles gambiae str. PEST] Length = 370 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 105/359 (29%), Gaps = 77/359 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + +N+ FD + R L I +V G P+ I+ + Sbjct: 28 AASERTVAQNRAAFDRLIIRPRCLQRIGGSR-SLAVTSFGVSYRMPIGIAPVALQCLAHP 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E + +A AA V + + + S + + A + + D Sbjct: 87 EG-EKAMARAARTHGVPFVL----------SVLSSVSIEELAEAVPRAPKWFQLYIFKDR 135 Query: 133 GVQKAH-QAVHVLGADGLFLHL-------------NPL---------------------Q 157 + + + L + + NPL Sbjct: 136 ELTECLVRRAEKARFRALVVSVDTPAPGLSRSERRNPLTLPAKVTCANFVPGGNGANGNG 195 Query: 158 EIIQP---------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + QP + + I L S +P+++K + L+ D + G+ Sbjct: 196 KASQPCSASVLDYVRSQLDPSLGWDAIQWLMSITTLPVIVKGI---LNRADALIAADIGV 252 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG + ++ +I N + + G+ Sbjct: 253 HGLIVSNSGGRQLDYAPAAIEVLPEI-----------------VHAVGNRLEVMLDSGVS 295 Query: 269 NGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G D K++ +GA + + + A++ V ++ L+ E +M G + + Sbjct: 296 QGTDTFKALAIGARMVFVGRAAVYGLAVNGQRGVEEVLDILKTELESTMLNAGCGTLAD 354 >gi|170690401|ref|ZP_02881568.1| L-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] gi|170144836|gb|EDT12997.1| L-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] Length = 392 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 113/370 (30%), Gaps = 76/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ F+ W L+ R L E VE G++ + P+ I+ M G Sbjct: 32 AEDHRAVVGNRTAFNRWVLVPRML--TGVAERSQEVEIFGQRYTSPVGIAPM-GLAGLCA 88 Query: 73 ERINRNLAIAAEKT---------------KVAMAVG------------SQRVMFSDHNAI 105 + LA AA KVAMA S Sbjct: 89 YEGDLQLAAAARDAKVPFVLSAASTVPLEKVAMAAPGSWYQGYLSADRSTITPLLARIER 148 Query: 106 KSFELRQYAPHTVLIS-------NLGAVQLNYDF-----GVQKAHQAVHVLGADGLFLHL 153 F + L + N +V L G+ + + G L + Sbjct: 149 AGFGVLVITVDVPLAAQRENELRNGFSVPLRLSRRLVYGGLARPRWLLSTFGRTLLTQGV 208 Query: 154 NPLQEIIQPNGNTNFAD------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + G + I + S L++K + L D Sbjct: 209 PHFENFTANRGGPIITGATGDHRSGRAALCWNDIHWIRSQWKGTLVVKGI---LHPDDAL 265 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 ++G ++ GG + T +L + Sbjct: 266 RAKQAGADGIIVSNHGGRQLDGA------------------LATLDALPAITAVAGDMPV 307 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+R G D++K++ LGA + + P + A+ V A++ LR+E V + LLG Sbjct: 308 ILDSGVRRGTDVIKALSLGARMVLVGRPAMYGLAVGGHAGVRHALQLLRREIDVDLALLG 367 Query: 321 TKRVQELYLN 330 R+++L + Sbjct: 368 CPRIEKLNRD 377 >gi|296171499|ref|ZP_06852763.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894061|gb|EFG73822.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 387 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 114/367 (31%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N++ FD W L+ R + E D SVE G L P+ ++ + G G Sbjct: 50 AGDERTQRANREAFDRWGLMPRMF--VGAAERDLSVELFGMTLPSPMFMAPI-GVIGICA 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA T V M V + + A + T L N Sbjct: 107 QDGHGDLATARAAAATGVPMVVSTLTADPLEDVAAQ-------FGDTPGFFQLYTP-KNR 158 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQE----IIQPNGNTNFADL 171 + +A G + + L N Q + + F Sbjct: 159 ELAASLVQRA-EAAGYKAIIVTLDTWIPGWRPRDLSTANFPQLRGLCLSNYTSDPVFRAG 217 Query: 172 SSK-------------------------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + L S +PL++K V D Sbjct: 218 LPRPPEEDPQATVLQWVTTFGNPLTWDDLPWLRSLTKLPLIVKGVCH---PDDARRAKDG 274 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + G Sbjct: 275 GVDGIYCSTHGGRQ------------------ANGGLPALDCLPGVVEAADGLPVLFDSG 316 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G DI+K++ LGA+ G+ P+ A+ +D VV + SL E + M + G ++ Sbjct: 317 IRGGADIVKALALGATAVGVGRPYAYGLALGGTDGVVHVLRSLLAEADLIMAVDGYPTLK 376 Query: 326 ELYLNTA 332 +L +T Sbjct: 377 DLTPDTL 383 >gi|213962200|ref|ZP_03390464.1| L-lactate dehydrogenase [cytochrome] [Capnocytophaga sputigena Capno] gi|213955206|gb|EEB66524.1| L-lactate dehydrogenase [cytochrome] [Capnocytophaga sputigena Capno] Length = 391 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 109/369 (29%), Gaps = 88/369 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 + +N F+ R L + D LGKK+ FP +MT G Sbjct: 36 EATYKQNVSDFNPIKFRQRIL--VDMDNRTLESTLLGKKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R++ + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDREFMKDLIRR 147 Query: 121 SN---------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + LG + G+ + + L + + N Sbjct: 148 AKEAKCSALMITVDLQVLGNRHRDIKNGLSTPPK-FTIPNMLNLSTKIPWGLRYVFGNRR 206 Query: 166 TNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F ++ IA + P++LK + ++ D Sbjct: 207 WTFRNIAGHAKNVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG I T +L ++ ++ Sbjct: 264 AIEAVKYGADAIIVSNHGGRQMDDT------------------ISTIKALPDIVSAVGSQ 305 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G G ++LK+ LGA L P + V A++ L E +M Sbjct: 306 TEVWIDSGFYTGQNMLKAWALGAKGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMA 365 Query: 318 LLGTKRVQE 326 G + +Q+ Sbjct: 366 FAGHRNLQD 374 >gi|190890098|ref|YP_001976640.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] gi|190695377|gb|ACE89462.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 652] Length = 382 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 114/381 (29%), Gaps = 90/381 (23%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-------- 58 D+I+ D RN F+ L+ L EVD SV +G+KL+ P Sbjct: 26 DYIDGAADDEVTYRRNTAAFEACDLVPNVLRG--VAEVDMSVTVMGQKLAMPVYCSPTAL 83 Query: 59 ----------------------LLISSMTGGNNKMIERI-----------------NRNL 79 +SS+ + + +I N + Sbjct: 84 QRLFHHQGERAVAAAAAKHGTMFGVSSLGTISLEEARQISDGPQVYQFYFHKDRGLNHEM 143 Query: 80 AIAAEKTKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNL-GAVQLNYDFGVQ 135 A+ V AM V S + + F + NL G Q Sbjct: 144 MARAKNAGVQAMMLTVDSITGGNRERDKRTGFAI-------PFKLNLAGVTQFAIKPSWA 196 Query: 136 KAHQAVHVLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 L H+ + + + + +A + A LK Sbjct: 197 IGWLTHERFALPQLENHVKMDGGALSISRYFTEMLDPSMSW--DDVAEMVRAWGGHFCLK 254 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + +S D + + G ++ GG S D ++I Sbjct: 255 GI---MSVEDAKRAVDIGCTGIVLSNHGGRQLDGSRSAFDQLAEI--------------- 296 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 + + GG++ G +LK++ LGA GL +L P A V A+E++ Sbjct: 297 --VDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQPGVERALETI 354 Query: 309 RKEFIVSMFLLGTKRVQELYL 329 R E M L+G + +L Sbjct: 355 RTEIERDMKLMGCTSIDQLTR 375 >gi|209517885|ref|ZP_03266719.1| L-lactate dehydrogenase (cytochrome) [Burkholderia sp. H160] gi|209501718|gb|EEA01740.1| L-lactate dehydrogenase (cytochrome) [Burkholderia sp. H160] Length = 417 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 119/369 (32%), Gaps = 74/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F + + R L ++ + + SV G++ + P +I TG + M Sbjct: 40 AEDEATLRRNRDVFGEIAFLPRTL--VNVEHRNQSVTLFGQRSAAPFMIGP-TGYSGLMF 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHTVLISN 122 + LA AA + + + + + ++ + R++ + Sbjct: 97 REGDVKLASAAAAAGIPFVLSNVSTVALEDVVRRAGGRVWMQVYMYRTREFLAKLAQRAK 156 Query: 123 ---LGAVQLNYDFGVQKAHQA-----VHVLGADG-----LFLHLNPLQEIIQPNGNTNFA 169 + A+ + D V + + L D + H + ++ PNG FA Sbjct: 157 AAGIEALVVTTDSAVFGKREWDLRNYIEPLKLDWRNKFDVLRHPRWMANVLWPNGMPRFA 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L L++K V L + D Sbjct: 217 NLGDLLPPGQDSVKGATITLGRELDPSLSWDDIRWLRDLWPNRLIVKGV---LGAPDALR 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 L++G+ ++ GG S D+ ++ + Sbjct: 274 ALETGVDGIVLSNHGGRQLDSAVSAMDVLPEV-----------------VEQVGGRLCVM 316 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG R G +ILK++ LGA L AIE L+ E ++ LLG Sbjct: 317 LDGGFRRGSEILKAVALGADAVLLGRATTYGLSAGGQPGAERAIEILKTEIDRTLGLLGC 376 Query: 322 KRVQELYLN 330 + L + Sbjct: 377 SDIAGLDRS 385 >gi|288917523|ref|ZP_06411888.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] gi|288351069|gb|EFC85281.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] Length = 387 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 122/355 (34%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + D N FDDW LI R L + D SVE G L PLL++ + G G Sbjct: 50 AGDERTQDLNVSVFDDWGLIPRML--VDGSHRDLSVELCGITLPSPLLMAPV-GVIGLCA 106 Query: 71 MIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFEL 110 + +A A+ +T V M + Q +D +S Sbjct: 107 QDGHGDLAVARASARTGVPMIASTLAADPLEDVASQLGETPGFFQLYTPNDRELAESLVH 166 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQ---------AVHVLGADGLFLH--LNPLQEI 159 R + + + + A+ +D +F+ P +E Sbjct: 167 RAEN-AGFRGIVVTLDTWVPGWRPRDLTRSNFPQLRGLALENYFSDPVFVSRLARPPKED 225 Query: 160 IQPNGNT------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 +Q T N + + +A S +PL+LK + + D+ + G+ Sbjct: 226 LQAAVGTWALTFGNPSLTWTDLAWFRSMTSLPLILKGI---MHPEDVRRAVDGGVDAIYC 282 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + G+ + L E + G+R+G I Sbjct: 283 SNHGGRQ------------------ANGGLASLDMLPDVVEAAGEIPVVFDSGVRSGDHI 324 Query: 274 LKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +K++ LGA G+ P++ + D VV + SL E + M + G R+ +L Sbjct: 325 VKALALGARAVGVGRPYVYGLSLGGEDGVVHVLRSLLAEADLLMAVDGYPRIADL 379 >gi|114797920|ref|YP_760815.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] gi|114738094|gb|ABI76219.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] Length = 365 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 94/297 (31%), Gaps = 66/297 (22%) Query: 55 LSFPLLISSMT----------GG------NNKMIERINRNLAIAAEKTK---VAMAVGSQ 95 + PL +S M GG + L AE + + V + Sbjct: 111 MQAPLAVSCMATETVEAIAGQGGPVWFQIYMQATRAATEALVRRAEAAGCRALLVTVDAP 170 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 + F L P ++ +NL A GA +F Sbjct: 171 IGGIRNRAQRVGFSL----PLGMVAANLPAEGAPPPL----------KAGASAVF----- 211 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +G A + I L+ +P+ +K + L + D E L +G ++ Sbjct: 212 -------DGMMRAAPGWADIEWLTRLTRLPVFVKGI---LHADDAERALSAGAAGIVVSN 261 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + I A + G+R G D K Sbjct: 262 HGGRVLDTAPAAINALPAIAARLNG-----------------AAPILFDSGVRRGSDAFK 304 Query: 276 SIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 +I LGA + P++ + + V + +LR+E ++M L+G + + ++ + Sbjct: 305 AIALGADAVMIGRPYIWALSVAGALGVAHLLRTLREELEITMALMGCRTLTDIRQAS 361 >gi|228473551|ref|ZP_04058303.1| L-lactate dehydrogenase (cytochrome) [Capnocytophaga gingivalis ATCC 33624] gi|228274923|gb|EEK13733.1| L-lactate dehydrogenase (cytochrome) [Capnocytophaga gingivalis ATCC 33624] Length = 391 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 108/369 (29%), Gaps = 88/369 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 N F+ R L + D LG+K+ FP +MT G Sbjct: 36 QSTYRENVSDFNPIKFKQRIL--VDMDNRTLETTLLGQKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R++ + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDREFMKDLIRR 147 Query: 121 SN---------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + LG + G+ + + L + + N Sbjct: 148 AKEAKCSALMVTVDLQVLGNRHRDIKNGLSTPPK-FTIPNILNLSTKIPWGLRYVFGNRR 206 Query: 166 TNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F ++ IA + P++LK + ++ D Sbjct: 207 WTFRNIAGHAKNVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 + +K G ++ GG I + +L ++ ++ Sbjct: 264 AQEAVKYGADAIIVSNHGGRQMDDT------------------ISSIKALPDIVSAVGSQ 305 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G G ++LK+ LGA L P + V A++ L E +M Sbjct: 306 TEVWIDSGFYTGQNMLKAWALGAKGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMA 365 Query: 318 LLGTKRVQE 326 G + +Q+ Sbjct: 366 FSGHRNIQD 374 >gi|218658859|ref|ZP_03514789.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli IE4771] Length = 178 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + PL++K V L D +G ++ GG S + Sbjct: 25 WADVAWIKEQWGGPLIIKGV---LDPEDARAAADTGADAIVVSNHGGRQLDGAPSSISML 81 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+I LGA + PFL Sbjct: 82 PSI-----------------VDAVGDRIEIHLDGGIRSGQDVLKAIALGAKGTYIGRPFL 124 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V A+ +RKE ++M L G + + + +N ++I Q Sbjct: 125 YGLGAMGKEGVTLALGIIRKEMDITMALCGKRDIND--VNASIISRQ 169 >gi|209550452|ref|YP_002282369.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536208|gb|ACI56143.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 380 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + PL++K V L D + +G ++ GG S + Sbjct: 235 WADVAWIKEQWGGPLIIKGV---LDPEDAKAAADTGADAIVVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK++ LGA + PFL Sbjct: 292 PAI-----------------VDAVGDRIEVHLDGGIRSGQDVLKAVALGAKGTYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V A+ +RKE ++M L G + ++ ++N+++I + Sbjct: 335 YGLGAMGKEGVTLALGIIRKEMDITMALCGKRDIK--HVNSSIIAGR 379 >gi|163734581|ref|ZP_02142020.1| putative L-lactate dehydrogenase [Roseobacter litoralis Och 149] gi|161392074|gb|EDQ16404.1| putative L-lactate dehydrogenase [Roseobacter litoralis Och 149] Length = 389 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 121/370 (32%), Gaps = 75/370 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N F+ L R + + + +G+ +S P+ ++ + G+ M Sbjct: 33 EQTFHENTTDFEKIRLRQRV--AVDMTGRSTAGQMIGEDVSMPVALAPV--GSTGMQHAD 88 Query: 76 NRNLA-IAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN-- 122 LA AAE V + + + + A + F+L +++ + + Sbjct: 89 GEILAAQAAEAFGVPFTLSTMSICSIEDVAANTSKPFWFQLYAMKDKRFVERVIQRAKDA 148 Query: 123 -------------LGAVQLNYDFGVQ-----KAHQAVHV------LGADG---------L 149 LG + G+ + + + A + Sbjct: 149 KCSALVLTLDLQILGQRHKDIKNGLSIPIRPTVPNLIDLATKWRWIAAMAKTKRRQFGNI 208 Query: 150 FLHLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 H++ + ++ I + + ++ + PL+LK + L + D ++ L Sbjct: 209 VGHIDGISDMSSLSIWAAESFDPKLNWDEVKEIKKMWGGPLILKGI---LDAEDAKMALN 265 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG S I ++ + G Sbjct: 266 VGADAIIVSNHGGRQLDGALSSIRALPAILD-----------------AVGDKVEVHMDG 308 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ LGA + F+ V A+E + KE +M L G V Sbjct: 309 GIRSGQDVLKALALGAKGTYIGRAFVHGLGAMGGPGVTKALEIIHKELDTTMALCGETNV 368 Query: 325 QELYLNTALI 334 +L + L+ Sbjct: 369 ADLGRHNLLV 378 >gi|170744680|ref|YP_001773335.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium sp. 4-46] gi|168198954|gb|ACA20901.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium sp. 4-46] Length = 391 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + PL+LK + L D EL +SG + ++ GG S Sbjct: 241 WDDVKRIQDRWGGPLILKGI---LDPEDAELAARSGAQALIVSNHGGRQLDGAPSSITAL 297 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + + GG+R+G D++K++ LGA + FL Sbjct: 298 PAIAE-----------------AVGSRIEVLMDGGIRSGQDVIKALALGAKGVFIGRAFL 340 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 +A V ++ +RKE +M + G + V+ Sbjct: 341 YGLGAGGEAGVTQCLDIIRKELDTTMAMCGLRDVKA 376 >gi|116253321|ref|YP_769159.1| L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115257969|emb|CAK09067.1| putative L-lactate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 380 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + PL++K + L D + +G ++ GG S + Sbjct: 235 WADVAWIKEQWGGPLIIKGI---LDPEDARAAVDTGADAIVVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK++ LGA + PFL Sbjct: 292 PKI-----------------VDAVGDRIEVHLDGGIRSGQDVLKAVALGAKGTYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V A+ +RKE ++M L G + + + +N+++I + Sbjct: 335 YGLGAMGKEGVSLALGIIRKEMDITMALCGKRDIND--VNSSIIDGR 379 >gi|251793699|ref|YP_003008429.1| L-lactate dehydrogenase [Aggregatibacter aphrophilus NJ8700] gi|247535096|gb|ACS98342.1| L-lactate dehydrogenase (cytochrome) [Aggregatibacter aphrophilus NJ8700] Length = 381 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 114/360 (31%), Gaps = 73/360 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + RN + L R L +++ +E G+KLS P++++ + G R Sbjct: 32 EYTLARNVSDLSEIALRQRVL--NDMSQLNTEIELFGEKLSMPVILAPV-GACGMYASRG 88 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLNY 130 A AA + + + + + A F+L + A++ Sbjct: 89 EVQAAKAAAAKGLPFTLSTVSICPIEEVAPAINRPMWFQLYVLKDRGFMK---NALERAK 145 Query: 131 DFGVQKAHQAVHV--LGADGLFLH------LNPLQEIIQPNGNTNFAD------------ 170 G V + GA +H L+ +IQ + ++ Sbjct: 146 AAGCSTLVFTVDMPTPGARYRDMHSGMSGDYKWLRRVIQGATHPFWSYDMMTKGRPFTLG 205 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKS 206 L I L+ D + K++ L D + + Sbjct: 206 NVSKYMGKPVALDDYIGWLTENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVHF 265 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG + S I + + + GG Sbjct: 266 GADGIVVSNHGGRQLDGVLSSARALPPIAD-----------------AVKGDIKILVDGG 308 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +RNG+D+++ + LGA + PF+ D V ++ +KE V++ L TK + Sbjct: 309 IRNGLDVVRMMALGADATMIGRPFVYALGADGQRGVENLLDIFKKEMRVALTLTSTKDIS 368 >gi|42516885|emb|CAD92065.1| isopentenyl diphosphate isomerase type 2 [Natronobacterium gregoryi] Length = 94 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%) Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDF 132 NR LA AAE+T VAM VGSQR D ++S+ + R AP+ L N+GA QL ++ Sbjct: 1 NRTLAEAAERTNVAMGVGSQRAGLELDDEAVLESYTVVRDAAPNAFLYGNVGAAQL-LEY 59 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 GV +AV ++ AD + +HLN LQE +QP G+ + Sbjct: 60 GVDDVEEAVEMIDADAMAIHLNFLQEAVQPEGDVD 94 >gi|71910154|ref|YP_281704.1| L-lactate oxidase [Streptococcus pyogenes MGAS5005] gi|71852936|gb|AAZ50959.1| L-lactate oxidase [Streptococcus pyogenes MGAS5005] Length = 393 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDYLTSPLILAPVA------A 106 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 107 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 166 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 282 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 325 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 379 >gi|89256319|ref|YP_513681.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica LVS] gi|254367651|ref|ZP_04983672.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica 257] gi|89144150|emb|CAJ79409.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica LVS] gi|134253462|gb|EBA52556.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica 257] Length = 389 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 120/364 (32%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 43 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 99 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 100 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQLYLMKDRGFTKSLLERAKAC 159 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 160 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINITAKQSWVWGYLLSKYKQFGN 218 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 219 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 275 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L ++ + + I Sbjct: 276 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAISDKVKGDIKII 317 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+ DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 318 LDSGIRSDQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 377 Query: 322 KRVQ 325 + Sbjct: 378 SDLN 381 >gi|118463486|ref|YP_883479.1| lactate 2-monooxygenase [Mycobacterium avium 104] gi|118164773|gb|ABK65670.1| lactate 2-monooxygenase [Mycobacterium avium 104] Length = 392 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 115/353 (32%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F W L R I+ ++ D SVE G + P+ ++ + G G Sbjct: 49 AGDEQTQRANCEAFKRWGLYPRM--GIAPEQRDMSVELFGTRFPSPIFMAPI-GVIGVCD 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 + A A+ +T V VG+ + A + +F P + ++L Sbjct: 106 PDGHGDLACARASIRTGVPFFVGTLSADPMEDLADELGDTPAFFQLYTPPDRKMAASLVH 165 Query: 124 ---GAVQLNYDFGVQK-----------------------AHQAVHVLGADGLFLHLNPLQ 157 A + A+ + GL +P + Sbjct: 166 RAEAAGFKGIAVTLDTWVTGWRPRDLSGGNYPQVPSGCLANYTSDPVFRAGLSRGEDPTE 225 Query: 158 EIIQPNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + F + L S +PL+ K + D+ G+ + Sbjct: 226 AAV--RKLPIFGGPFRWEDLEWLRSRTSLPLMAKGICH---PDDVRRAKDIGVDAIYCSN 280 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + G+P L + + G+R+G DI+K Sbjct: 281 HGGRQ------------------ANGGLPCLDCLPGVVEAADGLPVLFDSGVRSGADIVK 322 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA+ G+ P+ A+ D +V + SL E + M + G +++L Sbjct: 323 ALALGATAVGIGRPYAYGLALGGVDGIVHVLRSLLAEADLIMAVDGYPSLKDL 375 >gi|15674548|ref|NP_268722.1| L-lactate oxidase [Streptococcus pyogenes M1 GAS] gi|13621653|gb|AAK33443.1| putative lactate oxidase [Streptococcus pyogenes M1 GAS] Length = 395 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDYLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|238486164|ref|XP_002374320.1| FMN dependent dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|220699199|gb|EED55538.1| FMN dependent dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 404 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 119/371 (32%), Gaps = 71/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N+K F W ++ L + F G+ +P+ I+ + G ++ Sbjct: 56 AGTRETDDNNRKAFRKWGIVPSRLVKSDF--PSLKTTLFGEDYEYPIAIAPV--GVQRIF 111 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIK-------------SFELRQYAPHTV 118 R +A A+ + + S + A S+E + Sbjct: 112 HRDGEVAVASTAQNEGITYILSSASSTSIEDVAEANGDGSRWFQLYWPSYEHNDITASLL 171 Query: 119 LIS-------------------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 + N L D + + V H Sbjct: 172 KRAKAANYKVLVVTLDTYILGWRPSDLENGYNPFLRKDNIGVEIGFSDPVFQKKFAEKHG 231 Query: 154 NPLQEIIQPNG----NTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +QE + + F + + L D P++LK + + D +L ++ Sbjct: 232 KSIQEDMATAAAEWAHMIFPGMSHGWEDLQFLRQHWDGPIVLKGIQ---TVEDAKLAVEY 288 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G++ ++ GG D+ DI + + I G Sbjct: 289 GMQGIVVSNHGGRQQDGGVGSLDMLPDI-----------------VDAVGKDLEVIFDSG 331 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+ K++ LGA + + P++ A+ + V ++S + +++ L G + VQ Sbjct: 332 VRCGADVAKALALGAKMVLIGRPYVYGLAIAGREGVRHVLQSTLGDLQLTLHLSGIRSVQ 391 Query: 326 ELYLNTALIRH 336 +LN + +R Sbjct: 392 PEHLNRSRLRR 402 >gi|49473920|ref|YP_031962.1| L-lactate dehydrogenase [Bartonella quintana str. Toulouse] gi|81827642|sp|Q6G0J2|LLDD_BARQU RecName: Full=L-lactate dehydrogenase [cytochrome] gi|49239423|emb|CAF25762.1| L-lactate dehydrogenase [Bartonella quintana str. Toulouse] Length = 383 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 117/374 (31%), Gaps = 81/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN L R L ++ EVD S++ ++L+ P++++ + G Sbjct: 29 AYAEETMRRNYADLQALALRQRILRQVG--EVDLSIKLFDQRLNLPIVLAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA + + S V + F+L + L Sbjct: 86 RRGEVKAARAAVAKGIPFTLSSVSVCSLAEVHAEVGSGFWFQLYVLKDRGFMRDVLERSW 145 Query: 128 LNYDFGVQKAHQAVHVL--GADGLFLHL----------NPLQEIIQPN------------ 163 L GV+ V + GA H LQ ++ P+ Sbjct: 146 LA---GVRTLVFTVDMPVPGARYRDAHSGMSGPYAGLRRILQAVVHPHWAWNVGIMGRPH 202 Query: 164 -------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDI 200 ++ S + + ++LK + L D Sbjct: 203 DLGNVSTYLQKKITLEDYVGWLGANFDPSIGWSDLQWIRDFWKGKMILKGI---LDPQDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + T +L +A + Sbjct: 260 REAVQFGADGIVVSNHGGRQLDGV------------------LSTARALPAIAEVVTGDL 301 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFL 318 +A G+R+G+D+++ I GA + F+ A V+ ++ E V+M L Sbjct: 302 TILADSGVRSGLDVVRMIAQGADAVMIGRAFIYALAAAGEKGVMHLLDLFANEMRVAMTL 361 Query: 319 LGTKRVQELYLNTA 332 G + V+E+ + Sbjct: 362 TGVRAVKEITHESL 375 >gi|294665260|ref|ZP_06730556.1| L-lactate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604975|gb|EFF48330.1| L-lactate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 388 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 115/368 (31%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN D L R L + ++ S E G+ L+ P+ ++ + TG + Sbjct: 29 AYAEHTLRRNVSDLADVALRQRVL--RNMSDLRLSTELFGETLAMPVALAPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 E A AA + + + V + A F+L + + L Sbjct: 87 RGEV---QAARAAAARGIPFILSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALER 143 Query: 124 ----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLN---PLQEIIQPN------------- 163 G L + + + H + LQ + P Sbjct: 144 AKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPHASLRRMLQAVTHPRWAWDVGLLGKPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 G ++ + + P+++K + L D Sbjct: 204 LGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPEDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ G ++ GG + + + +L +A E + Sbjct: 261 DAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGELK 302 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLL 319 +A G+R+G+D+++ + LGA L F+ A V + + KE V+M L Sbjct: 303 ILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEKEMRVAMTLT 362 Query: 320 GTKRVQEL 327 GT + ++ Sbjct: 363 GTHSIADI 370 >gi|71902994|ref|YP_279797.1| L-lactate oxidase [Streptococcus pyogenes MGAS6180] gi|71802089|gb|AAX71442.1| L-lactate oxidase [Streptococcus pyogenes MGAS6180] Length = 395 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 107/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFE--------LRQY 113 ++ A + ++ S F+ + + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYCSKDDGINRN 168 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 V A+ L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ ++ + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDHKVPIVFDSGIRRGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|327189427|gb|EGE56591.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CNPAF512] Length = 382 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 115/387 (29%), Gaps = 90/387 (23%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-------- 58 D+I+ D RN F+ L+ L EVD SV +G+KL+ P Sbjct: 26 DYIDGAADDEVTYRRNTAAFEACDLVPNVLRG--VAEVDMSVTVMGQKLAMPVYCSPTAL 83 Query: 59 ----------------------LLISSMTGGNNKMIERI-----------------NRNL 79 +SS+ + + +I N + Sbjct: 84 QRLFHHQGERAVAAAAAKHGTMFGVSSLGTISLEEARQISAGPQVYQFYFHKDRGLNHEM 143 Query: 80 AIAAEKTKV-AMA--VGSQRVMFSDHNAIKSFELRQYAPHTVLISNL-GAVQLNYDFGVQ 135 A+ V AM V S + + F + NL G Q Sbjct: 144 MARAKNAGVQAMMLTVDSITGGNRERDKRTGFAI-------PFKLNLAGVTQFAIKPSWA 196 Query: 136 KAHQAVHVLGADGLFLHLN------PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 L H+ + + + + +A + A LK Sbjct: 197 IGWLTHERFALPQLENHVKMDGGALSISRYFTEMLDPSMSW--DDVAEMVRAWGGHFCLK 254 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + +S D + + G ++ GG S D ++I Sbjct: 255 GI---MSVEDAKRAVDIGCTGIVLSNHGGRQLDGSRSAFDQLAEI--------------- 296 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 + + GG++ G +LK++ LGA GL +L P A V A+E++ Sbjct: 297 --VDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETM 354 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 R E M L+G V +L R Sbjct: 355 RTEIERGMKLMGCTSVDQLTRRNLRFR 381 >gi|58039621|ref|YP_191585.1| putative oxidoreductase [Gluconobacter oxydans 621H] gi|58002035|gb|AAW60929.1| Putative oxidoreductase [Gluconobacter oxydans 621H] Length = 381 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 112/364 (30%), Gaps = 74/364 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIE 73 + + N++ F+ W ++ + L + + D S FLG P + + + GG Sbjct: 31 SERTVRANRRAFERWAVVPKCL--VDVSDCDLSGSFLGATHRLPFMFAPLGFGGLMCPDG 88 Query: 74 RINRNLAIAAEKTKVAMAVG----------SQRVMFSDHNAIKSFELRQYAPHTVLISN- 122 I A A + MAV S+ + I F R + + Sbjct: 89 EI--RAARVAASAGLPMAVSTFAIQSLETLSRVPGVTLAAQIYVFRDRGITRDMLRRAES 146 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLG-----ADGLFLHLNPLQEIIQP--------NGNTN 167 + + L D + + V H+ L P NG Sbjct: 147 CGIRNIILTVDTPI-TPLRLRDVRNGFRNLTRPSLRHV--LSMAAHPRWTAGMLRNGMPK 203 Query: 168 F---------ADLSSKIALLSSAMDVPLLLKE-------------VGCGLSSMDIELGLK 205 ++L + +S +D L K+ V + + D K Sbjct: 204 IGNLAPYGMGSNLMEQARNAASQIDPTLTWKDLDWLRSVWPGQLAVKGIMDAGDALACQK 263 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + ++ GG S + SDI E I G Sbjct: 264 AGAQTVIVSNHGGRQMDPAPSSLSVLSDI-----------------VEALKGETDVILDG 306 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++ ++ LGA G+ P+ + V + ++ L E + L G + Sbjct: 307 GVRWGGDVVTALALGAKAVGIGRPWAWALAAGGERGVRSLVDGLGGEIRDVLRLGGMVDL 366 Query: 325 QELY 328 L Sbjct: 367 ASLR 370 >gi|240849933|ref|YP_002971322.1| L-lactate dehydrogenase [Bartonella grahamii as4aup] gi|240267056|gb|ACS50644.1| L-lactate dehydrogenase [Bartonella grahamii as4aup] Length = 383 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 23/164 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + ++LK + L D +K G ++ GG + Sbjct: 234 WHDLQWIRDFWKGKMILKGI---LDPEDAREAVKFGADGIVVSNHGGRQLDGV------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + T +L +A + +A G+R+G+D+++ I GA + F Sbjct: 284 -----------LSTTRALPAIADAVKDHLTILADSGVRSGLDVVRMIAQGADAVMIGRAF 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + A V+ ++ E V+M L GT+ ++++ + + Sbjct: 333 VYALAAAGKKGVMHLLDLFANEMRVAMTLTGTQTIKDITRKSLV 376 >gi|290952890|ref|ZP_06557511.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|295313935|ref|ZP_06804500.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica URFT1] Length = 387 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I ++TG + Sbjct: 41 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAI-ALTGLAGMFWPK 97 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 98 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQLYLMKDRGFTKSLLERAKAC 157 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 158 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINITAKQSWVWGYLLSKYKQFGN 216 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 217 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 273 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L ++ + + I Sbjct: 274 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAISDKVKGDIKII 315 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+ DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 316 LDSGIRSDQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 375 Query: 322 KRVQ 325 + Sbjct: 376 SDLN 379 >gi|322513385|ref|ZP_08066503.1| L-lactate dehydrogenase [Actinobacillus ureae ATCC 25976] gi|322120816|gb|EFX92680.1| L-lactate dehydrogenase [Actinobacillus ureae ATCC 25976] Length = 381 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 115/367 (31%), Gaps = 69/367 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + ++RN D L R L ++D +E G+KL+ P +++ + G R Sbjct: 31 AERTLERNVTDLADLALRQRVLK--DMSKLDIEIELFGEKLAMPAVLAPV-GACGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFEL--RQYAPHTVLISNL- 123 A AAE + + + + + L R + H + + Sbjct: 88 GEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAA 147 Query: 124 --GAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQP--------NGNT------ 166 + D A G G + + LQ + P G Sbjct: 148 GCSTLVFTVDMPTPGARYRDRHSGMSGEYKEIRRALQAVAHPFWAWDVGIKGKPHTLGNV 207 Query: 167 -----NFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKSGI 208 L + L D + K++ L D + ++ G Sbjct: 208 SAYTGKAVGLDDYVVWLGENFDPSISWKDLEWIRDFWDGSMVIKGILDPEDAKDAVRFGA 267 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGL 267 ++ GG + + +L +A + + +A G+ Sbjct: 268 DGIVVSNHGGRQLDGA------------------LSSARALPSIADAVKGDIKILADSGI 309 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 RNG+DI++ + LGA + F+ V ++ +KE V+M L +++ + Sbjct: 310 RNGLDIVRMLALGADATMIGRSFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISD 369 Query: 327 LYLNTAL 333 + + + Sbjct: 370 ITRDALV 376 >gi|56695715|ref|YP_166066.1| L-lactate dehydrogenase, putative [Ruegeria pomeroyi DSS-3] gi|56677452|gb|AAV94118.1| L-lactate dehydrogenase, putative [Ruegeria pomeroyi DSS-3] Length = 387 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 120/374 (32%), Gaps = 83/374 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD L R + + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENSSDFDLIRLRQRV--AVDMSGRSTASQMVGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI----- 120 I A AA + V + + + + A + + +R + LI Sbjct: 90 EI--KAARAANEFGVPFTLSTMSINSIEEVAEATGRPFWFQLYTMRDTDYTSRLIQRAKA 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQEIIQP-----NGNTN 167 +N A+ + D ++ A L + N + + N Sbjct: 148 ANCSALVITLDLQILGQRHKDLKNGLSAPPKLTPRTIA---NLMTKWAWGIEMLGAKRRN 204 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F ++ K+A L D ++LK + L + D + Sbjct: 205 FGNIVGHVHGVSDTANLGAWTAEQFDPTLDWGKVAKLMEQWDGKVILKGI---LDAEDAK 261 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + K G ++ GG S + +I + + Sbjct: 262 MAAKLGADAIVVSNHGGRQLDGALSSIRVLPEIMD-----------------AVGGDIEV 304 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G D+LK++ LGA + F+ V A+E +RKE +M L G Sbjct: 305 HLDSGIRSGQDVLKALALGAKGTMIGRAFVYGLGAMGQKGVTTALEVIRKELDTTMALCG 364 Query: 321 TKRVQELYLNTALI 334 + V +L + L+ Sbjct: 365 ERNVADLGRHNLLV 378 >gi|70989906|ref|XP_749802.1| FMN dependent dehydrogenase [Aspergillus fumigatus Af293] gi|66847434|gb|EAL87764.1| FMN dependent dehydrogenase, putative [Aspergillus fumigatus Af293] gi|159122821|gb|EDP47942.1| FMN dependent dehydrogenase, putative [Aspergillus fumigatus A1163] Length = 404 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 121/371 (32%), Gaps = 71/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N+K F W ++ L + F G+ +P+ I+ + G ++ Sbjct: 56 AGTRETDDNNRKAFRKWGIVPSRLVKSDFPN--LKTTLFGEDYEYPIAIAPV--GVQRIF 111 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMF------SDHNAIKSFEL--------------- 110 R +A A+ + + S ++ + + F+L Sbjct: 112 HRDGEVAVASTAQNEGITYILSSASSTSIEDVAEANGDGSRWFQLYWPSNEHNDITASLL 171 Query: 111 ---RQYAPHTVLIS--------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 + ++++ N L D + + V H Sbjct: 172 KRAKAANYKVLVVTLDTYILGWRPSDLENGYNPFLRKDNIGVEIGFSDPVFQKKFAEKHG 231 Query: 154 NPLQEIIQPNGNTNFA-------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +QE + + L D P++LK + + D +L ++ Sbjct: 232 KSIQEDMATAAAEWAHMIFPGMSHGWEDLQFLRQHWDGPIVLKGIQ---TVEDAKLAVEY 288 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G++ ++ GG D+ DI + + I G Sbjct: 289 GMQGIVVSNHGGRQQDGGVGSLDMLPDI-----------------VDAVGKDLEVIFDSG 331 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+ K++ LGA + + P++ A+ + V ++S + +++ L G + VQ Sbjct: 332 VRCGADVAKALALGAKMVLIGRPYVYGLAIAGREGVRHVLQSTLGDLQLTLHLSGIRSVQ 391 Query: 326 ELYLNTALIRH 336 +LN + +R Sbjct: 392 PEHLNRSRLRR 402 >gi|307543733|ref|YP_003896212.1| L-lactate dehydrogenase [Halomonas elongata DSM 2581] gi|307215757|emb|CBV41027.1| L-lactate dehydrogenase [Halomonas elongata DSM 2581] Length = 393 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 68/377 (18%), Positives = 123/377 (32%), Gaps = 77/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ FD++ R L + D S G+ + PL+I TG N + Sbjct: 40 ADDERTLRHNRDAFDNYLFEPRTLTRVGPR--DLSTTLQGRPHALPLVIGP-TGYNGMLT 96 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSDHNAIKS---------FELRQYAPHTVLISN 122 + LA AA + + + + D A++ + R Y V Sbjct: 97 RHGDIKLATAASRKGIPFVLSNVATTSLEDIAALEGLDAWMQIYFYRDRDYVRKLVERCR 156 Query: 123 L-----------GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFA 169 A+ N ++ ++ + + + L P + +++ P+G F Sbjct: 157 SAGYSTLVVTTDSAIYGNREWDLRNFRKPMQPTLRNLFHLVSRPRWIADVLVPDGMPTFK 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L IA L L++K + L+ + E Sbjct: 217 NLGDLLPPGKQSVQGASAIIGQQLDPTLNWDDIAWLRDLWPGRLIVKGI---LAPAEAER 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQF 261 + G+ ++ GG + L AR Q Sbjct: 274 AAEIGVDGVVLSNHGGRQLDHA------------------LSPMDVLPEARSRAGKRCQL 315 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 G R G D++K++ LGA L L A V A++ L +E ++ LLG Sbjct: 316 FIDSGFRRGTDVVKALALGADAVWLGRATLYGLAAGGQAGVEHALDILHREIDRTVGLLG 375 Query: 321 TKRVQELYLNTALIRHQ 337 R+ +L + L RH+ Sbjct: 376 VDRIDDL-DASVLARHR 391 >gi|87199072|ref|YP_496329.1| L-lactate dehydrogenase [Novosphingobium aromaticivorans DSM 12444] gi|87134753|gb|ABD25495.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Novosphingobium aromaticivorans DSM 12444] Length = 381 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + S + PL++K + L D G ++ GG + Sbjct: 237 WSDLDFIRSEWNGPLVIKGL---LDPEDAVEAANLGADGIVVSNHGGRQLDGV------- 286 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 + + +L +A + +A GG+R+G+D+++ + LGA L Sbjct: 287 -----------LSSAKALPAIADAVGDRMTVLADGGVRSGLDVVRLLALGAKGVLLGRAW 335 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A V + + E V+M L G K + E+ + Sbjct: 336 VFALAAQGQAGVEHMLRLIEAEMRVAMTLTGVKNIGEIDRS 376 >gi|156502389|ref|YP_001428454.1| FMN dependent dehydrogenase [Francisella tularensis subsp. holarctica FTNF002-00] gi|156252992|gb|ABU61498.1| FMN dependent dehydrogenase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 389 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 121/364 (33%), Gaps = 78/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I ++TG + Sbjct: 43 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAI-ALTGLAGMFWPK 99 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 100 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQLYLMKDRGFTKSLLERAKAC 159 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 160 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINITAKQSWVWGYLLSKYKQFGN 218 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 219 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 275 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ GG + +PT +L ++ + + I Sbjct: 276 VKVGADGIVVSNHGGRQLDGV------------------LPTIEALPAISDKVKGDIKII 317 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+ DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 318 LDSGIRSDQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 377 Query: 322 KRVQ 325 + Sbjct: 378 SDLN 381 >gi|299532500|ref|ZP_07045890.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] gi|298719447|gb|EFI60414.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] Length = 392 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 104/364 (28%), Gaps = 78/364 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 N+ F L R ++ + +G++++ P+ I+ TG G Sbjct: 36 QGTYRANEDEFQSIKLRQRV--AVNMEGRSTRTTMIGEEVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---------FELRQYAPHTVLISNLG 124 I A AA+ V + + + + A + + +R A LI+ Sbjct: 93 EILG--AKAAKAFGVPFTLSTMSICSLEDIAEHTDRHPFWFQLYVMRDKAFMERLINRAK 150 Query: 125 AVQ---LNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 A L +Q Q + A+ + L P + Sbjct: 151 AANCSALVVTLDLQILGQRHKDIKNGLSTPPKPTLANLINLATKPHWCLGMLGTKRRSFG 210 Query: 171 L---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 S + + ++LK V + + D L Sbjct: 211 NIVGHVDGVGDVSSLSSWTADQFDPSLNWSDVEWIKKLWGGKIILKGV---MDAEDARLA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +SG ++ GG S I + + Sbjct: 268 AQSGADALVVSNHGGRQLDGAPSSIAALPSIAE-----------------AAGKDIEVWM 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + FL V A++ + KE +M G Sbjct: 311 DGGIRSGQDVLKARALGAQGTMIGRSFLYGLGAYGQAGVSKALQIIHKELDTTMAFCGHT 370 Query: 323 RVQE 326 + + Sbjct: 371 NINQ 374 >gi|264677084|ref|YP_003276990.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262207596|gb|ACY31694.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 392 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 104/364 (28%), Gaps = 78/364 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 N+ F L R ++ + +G++++ P+ I+ TG G Sbjct: 36 QGTYRANEDEFQSIKLRQRV--AVNMEGRSTRTTMIGEEVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---------FELRQYAPHTVLISNLG 124 I A AA+ V + + + + A + + +R A LI+ Sbjct: 93 EILG--AKAAKAFGVPFTLSTMSICSLEDIAEHTDRHPFWFQLYVMRDKAFMERLINRAK 150 Query: 125 AVQ---LNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 A L +Q Q + A+ + L P + Sbjct: 151 AANCSALVVTLDLQILGQRHKDIKNGLSTPPKPTLANLINLATKPHWCLGMLGTKRRSFG 210 Query: 171 L---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 S + + ++LK V + + D L Sbjct: 211 NIVGHVDGVGDVSSLSSWTADQFDPSLNWSDVEWIKKLWGGKIILKGV---MDAEDARLA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +SG ++ GG S I + + Sbjct: 268 AQSGADALVVSNHGGRQLDGAPSSIAALPSIAE-----------------AAGKDIEVWM 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + FL V A++ + KE +M G Sbjct: 311 DGGIRSGQDVLKARALGAQGTMIGRSFLYGLGAYGQAGVSKALQIIHKELDTTMAFCGHT 370 Query: 323 RVQE 326 + + Sbjct: 371 NINQ 374 >gi|111019977|ref|YP_702949.1| L-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] gi|110819507|gb|ABG94791.1| probable L-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] Length = 421 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 104/362 (28%), Gaps = 71/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--K 70 ++ G+ R + F D L D S G P I+ TG Sbjct: 56 AEQEIGLGRARSTFRDIEFQPGIL--RDVSSTDISTTVGGHVSGLPFGIAP-TGFTRLMN 112 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFEL---RQYAPHTVLIS 121 I AAEK + + + + +A + F+L R L+ Sbjct: 113 SEGEIAG--VRAAEKYGMPFVLSTMGTASIEEVGAAAPDAQRWFQLYLWRDRDKSMALVD 170 Query: 122 N-----LGAVQLNYDFGVQKAH---------------------------QAVHVLGADGL 149 G + + D V A V VL + L Sbjct: 171 RAHRAGYGTLVVTVDTPVGGARLRDVRNGMTVPPALGARTFADIARHPGWWVDVLTTEPL 230 Query: 150 -FLHLN--PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 F L+ P N + + L L++K V + D + Sbjct: 231 SFASLDSYPGSVAQLINEMFDPTLTFDDLDWLRREWGGRLVVKGVQ---TVDDARRCAEH 287 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L + ++ + G Sbjct: 288 GADAVVLSNHGGRQLDRAPVPLRLLPRVKDALTG----------------SDTEIYLDTG 331 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + G DI+ ++ LGA + +L M V AIE LR + + ++ L G + + Sbjct: 332 ILTGGDIVAALALGADFTFVGRAYLYGLMAGGRRGVERAIEILRDDIVRTLQLTGVRTIG 391 Query: 326 EL 327 EL Sbjct: 392 EL 393 >gi|94991857|ref|YP_599956.1| L-lactate oxidase [Streptococcus pyogenes MGAS2096] gi|94545365|gb|ABF35412.1| L-lactate oxidase [Streptococcus pyogenes MGAS2096] Length = 395 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDHLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + + G+R G I K++ A L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDQKVPIVFDSGIRRGQHIFKALASSADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSTGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|83767976|dbj|BAE58115.1| unnamed protein product [Aspergillus oryzae] Length = 404 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 121/371 (32%), Gaps = 71/371 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N+K F W ++ L + F G+ +P+ I+ + G ++ Sbjct: 56 AGTRETDDNNRKAFRKWGIVPSRLVKSDF--PSLKTTLFGEDYEYPIAIAPV--GVQRIF 111 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMF------SDHNAIKSFEL--------------- 110 R +A A+ + + S ++ + + F+L Sbjct: 112 HRDGEVAVASTAQNEGITYILSSASSTSIEDVAEANGDGSRWFQLYWPSNEHNDITASLL 171 Query: 111 ---RQYAPHTVLIS--------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 + ++++ N L D + + V H Sbjct: 172 KRAKAANYKVLVVTLDTYILGWRPSDLENGYNPFLRKDNIGVEIGFSDPVFQKKFAEKHG 231 Query: 154 NPLQEIIQPNGNTNFA-------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +QE + + L D P++LK + + D +L ++ Sbjct: 232 KSIQEDMATAAAEWAHMIFPGMSHGWEDLQFLRQHWDGPIVLKGIQ---TVEDAKLAVEY 288 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G++ ++ GG D+ DI + + I G Sbjct: 289 GMQGIVVSNHGGRQQDGGVGSLDMLPDI-----------------VDAVGKDLEVIFDSG 331 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+ K++ LGA + + P++ A+ + V ++S + +++ L G + VQ Sbjct: 332 VRCGADVAKALALGAKMVLIGRPYVYGLAIAGREGVRHVLQSTLGDLQLTLHLSGIRSVQ 391 Query: 326 ELYLNTALIRH 336 +LN + +R Sbjct: 392 PEHLNRSRLRR 402 >gi|222106753|ref|YP_002547544.1| L-lactate dehydrogenase [Agrobacterium vitis S4] gi|221737932|gb|ACM38828.1| L-lactate dehydrogenase [Agrobacterium vitis S4] Length = 386 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 110/365 (30%), Gaps = 77/365 (21%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKM 71 + N+ F L R L + E + +G+ ++ P+ ++ MT G Sbjct: 31 LSESTYHANESDFSRIKLRQRVL--VDMTERSLASTMIGEPVTMPVALAPTGMT-GMQHA 87 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRV-------------------MFSDHNAIKSFELRQ 112 I A AAE V + + + + D + + S R Sbjct: 88 DGEI--LAAEAAEAYGVPFTLSTMSICSIEDVALHTRRPFWFQLYVMKDRDFVNSLIDRA 145 Query: 113 YAPHTVLISNLGAVQL--NYDFGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFA 169 A H + +Q+ ++ A L + P I N Sbjct: 146 KAAHCSALVLTLDLQILGQRHKDLRNGLSAPPKFTPKHLWQMATKPQWCIGMANTRRRHF 205 Query: 170 D---------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 S +A + L+LK + L D Sbjct: 206 GNIVGHAKNVSSLSSLSAWTAEQFDPKLSWSDVAWIKERWGGKLILKGI---LDVEDARA 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 SG ++ GG S I S+ A + + Sbjct: 263 AADSGADAIIVSNHGGRQLDGAPSS---------------ISMLASIVEA--VGDRIEVH 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R+G D+LK++ LGA + PFL D V A+E + +E +SM L G Sbjct: 306 IDGGIRSGQDVLKALALGAKGTYIGRPFLYGLGADGRAGVQRALEIIARELDISMALCGK 365 Query: 322 KRVQE 326 + + E Sbjct: 366 RLISE 370 >gi|134302004|ref|YP_001121973.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049781|gb|ABO46852.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis WY96-3418] Length = 380 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 122/369 (33%), Gaps = 78/369 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N++ F + A + + + ++E G K S P I+ TG + Sbjct: 34 QQQTVYENEQAFRKIRINQSAFKDC--SQRNQTIEIFGFKSSVPFAIAP-TGLAGMFWPK 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTV---LISNLGA- 125 LA+AAEK +A MA+ S + + N F+L L+ A Sbjct: 91 GEIALALAAEKLDIAYTMSTMAICSLETVAKEANNHFWFQLYLMKDRGFTKSLLERAKAC 150 Query: 126 ----VQLNYDFGVQKAHQAVHVLGADGL--------FLHLNPLQEIIQ------------ 161 + +N D V + + + +++ Q + Sbjct: 151 GCQTIFVNADLPVSGIRYS-DMRNGLSIPPKFGIRDIINIAAKQSWVWGYLLSKYKQFGN 209 Query: 162 --------PNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 G + D I L + D L++K + L++ E Sbjct: 210 LSGHIPTGAKGMKSVTDFMDSQFDQSVTWKDIEWLRNIWDGNLIIKGL---LNTQGAENA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 +K G ++ G + +PT +L +A + + I Sbjct: 267 VKVGADGIVVSNHRGRQLDGV------------------LPTIEALPAIADKVKGDIKII 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G DI+K++ LGA + PFL V + L+KE +M L G Sbjct: 309 LDSGIRSGQDIIKALALGADFTLVGRPFLYGLSAFGQKGVEKVYDILKKEIDNTMALAGI 368 Query: 322 KRVQELYLN 330 + + N Sbjct: 369 SDLNNISTN 377 >gi|239832568|ref|ZP_04680897.1| L-lactate dehydrogenase [cytochrome] [Ochrobactrum intermedium LMG 3301] gi|239824835|gb|EEQ96403.1| L-lactate dehydrogenase [cytochrome] [Ochrobactrum intermedium LMG 3301] Length = 381 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + L+LK + L + D + KSG ++ GG S + Sbjct: 235 WNDVAWIKEQWGGKLILKGI---LDAEDARMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VDAVGDAIEVHVDGGIRSGQDVLKARALGAQGVFIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D V A+E +RKE V+M L G + + E+ + Sbjct: 335 YGLGAMGKDGVTLALEIIRKELDVTMALCGKRDINEIDKS 374 >gi|220927130|ref|YP_002502432.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium nodulans ORS 2060] gi|219951737|gb|ACL62129.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium nodulans ORS 2060] Length = 405 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + PL+LK + L D EL +SG + ++ GG S Sbjct: 255 WDDVKRIQDRWGGPLILKGI---LDPEDAELAARSGAQALIVSNHGGRQLDGALSSISAL 311 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + + GG+R+G D++K++ LGA + FL Sbjct: 312 PAIAA-----------------AVGDRIEVLMDGGIRSGQDVIKALALGAKGVFIGRAFL 354 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 +A V ++ +RKE +M + G + ++ Sbjct: 355 YGLGAGGEAGVTQCLDIIRKELDTTMAMCGLRDIKA 390 >gi|163744224|ref|ZP_02151584.1| L-lactate dehydrogenase (cytochrome) [Oceanibulbus indolifex HEL-45] gi|161381042|gb|EDQ05451.1| L-lactate dehydrogenase (cytochrome) [Oceanibulbus indolifex HEL-45] Length = 396 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 113/371 (30%), Gaps = 73/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N FD L R + + + +G+ ++ P+ ++ + G Sbjct: 33 EQTFRENSSDFDQIRLRQRV--AVDMSGRSTATQMIGEDVAMPVALAPV-GLTGMQCADG 89 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI-----SN 122 A AAE V + + + + A + + +R + LI + Sbjct: 90 EIKAARAAEAFGVPFTLSTMSINSIEDVAEATTKPFWFQLYTMRDQDYVSRLIQRAKDAK 149 Query: 123 LGAVQLNYDF--------GVQKAHQAVHVLGADGLF-LHLNPLQEIIQPNGNTNFAD--- 170 A+ + D ++ A L A + L I Sbjct: 150 CSALVITLDLQILGQRHKDLKNGLSAPPKLTAKTIANLATKWGWGIEMLGAKRRHFGNIV 209 Query: 171 ------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 KIA + ++LK + L + D + LK Sbjct: 210 GHVHGVTDNADLGAWTAEQFDPSLDWDKIAKIKEQWGGKVILKGI---LDAEDARMALKV 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + +I ++ + GG Sbjct: 267 GADAIIVSNHGGRQLDGALSSIRMLPEILD-----------------AVGDQIEVHLDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ +GA + F+ V A+E + +E ++M L G +V Sbjct: 310 IRSGQDVLKAMAMGAKGTYIGRAFIYGLGAMGQQGVTRALEVIHRELDLTMALCGETQVA 369 Query: 326 ELYLNTALIRH 336 L + LI Sbjct: 370 NLGRHNLLIPR 380 >gi|307205766|gb|EFN83996.1| Hydroxyacid oxidase 1 [Harpegnathos saltator] Length = 365 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 112/345 (32%), Gaps = 66/345 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + NK+ F+ + + R L + D S LG+K+S PL ++ +M Sbjct: 30 AGAQYSVKLNKEAFNRYRIRPRFL--RDVSKRDISTTVLGQKVSMPLGVAPTA--MQRMA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + A A G+ + S + E+ + AP+ + L + + Sbjct: 86 HPDGE-----CASARAAQAAGT-IFILSTISTSSIEEVMEAAPNGINWFQL-YIYRDRSV 138 Query: 133 GVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGNT--NFADLSSK------ 174 + +A G L ++ + P+ NF S+ Sbjct: 139 TLNLIRRA-EHSGFKALIFTVDAPLFGDRRADVRNKFTLPSHLRFANFEGDLSQRINSAK 197 Query: 175 ----IALLSSA-MDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDIAGR 216 + + D L K+V L+ D L ++SG ++ Sbjct: 198 TGSGLNEYVTEMFDASLTWKDVKWIKRITKLPIILKGILTVEDACLAVESGADGIIVSNH 257 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 G + + + +I R ++ + GG+ G+D+ K+ Sbjct: 258 GARQIDSVPATIEALPEI-----------------IRGVGDKIEVYMDGGVTQGIDVFKA 300 Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + LGA + P L + + +E +RKE ++ L G Sbjct: 301 LALGAKMVFFGRPMLWGLTYNGENGAKEILELMRKEIDLAFALTG 345 >gi|317053167|ref|YP_004119521.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] gi|316953494|gb|ADU72965.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] Length = 415 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 113/361 (31%), Gaps = 75/361 (20%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 GI + + + + R ++S D V LG S P ++ + GG + + R + Sbjct: 64 GIAAAYEAYQQYVFVPRMFRDVSGR--DQGVNLLGHHWSHPFGVAPL-GGASFVSYRADL 120 Query: 78 NLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTVLISN--------- 122 LA AA V M + + V+ ++ +A L P + + Sbjct: 121 MLAQAARAMNVPMILSASSLIPLEEVIAANPDAWFQAYLAGDQPRIDRLLDRVERAGYKT 180 Query: 123 ---------LGAVQLNYDFGVQKAHQAVHVLG--------------ADGLFLHLNPLQEI 159 LG + N G + + H P E Sbjct: 181 LVVTGDTPMLGNREHNTRSGFSMPIKITPKVMWQSAISPRWLLGTVVQTFLRHGAPHFEN 240 Query: 160 IQPNG----------NTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 NTN D + + L++K + +S D + G Sbjct: 241 TDAERGPPMMSNKVRNTNARDKLSWKHVEAIRKKWKGNLVIKGL---MSPDDAFIARDLG 297 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG +P +L + + I G+ Sbjct: 298 ADAVILSNHGGRQLDHT------------------VPPLHTLPEIAAAKGDMKVIIDSGI 339 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA-IESLRKEFIVSMFLLGTKRVQE 326 R G D++K++ LGA L PFL A+ + A + + LR E M L+G + + Sbjct: 340 RRGTDVMKAMALGADFVFLGRPFLYGAVIGAQAGIEHAMHILRDEIDRDMALIGVTQPDQ 399 Query: 327 L 327 L Sbjct: 400 L 400 >gi|163741696|ref|ZP_02149086.1| L-lactate dehydrogenase, putative [Phaeobacter gallaeciensis 2.10] gi|161384869|gb|EDQ09248.1| L-lactate dehydrogenase, putative [Phaeobacter gallaeciensis 2.10] Length = 408 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 118/371 (31%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + + +G+ +S P+ ++ + TG Sbjct: 53 EQTFRDNTNDFEKIRLRQRV--AVDMAGRSTASQMIGQDVSMPVALAPVGLTG-MQHADG 109 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FE---------LRQYAPHT-- 117 I A AAE V + + + + A + F+ +R+ Sbjct: 110 EI--KAARAAETFGVPFTLSTMSINSIEEVAEATTKPFWFQLYTMKDDDYVRRLIQRAKD 167 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQAVHVLGADGL-----------FLHLNPLQ 157 + + LG + G+ + A+ + N Sbjct: 168 ARCSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWTWGLQMLSAKRRNFGN 227 Query: 158 EIIQPNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + G ++ + L SKIA L D ++LK + L D ++ Sbjct: 228 IVGHVEGISDASSLGAWTAEQFDPSLDWSKIAKLIELWDGKVILKGI---LDVEDAKMAA 284 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + I ++ + Sbjct: 285 KLGADAIVVSNHGGRQLDGALSSIQMLPAI-----------------IDAVGDQIEVHLD 327 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ V A+E L KE +M L G K Sbjct: 328 SGIRSGQDVLKALALGAKGTMIGRAFVYGLGAMGQHGVTRALEVLHKELDTTMALCGEKS 387 Query: 324 VQELYLNTALI 334 V +L + L+ Sbjct: 388 VADLGRHNLLV 398 >gi|226356535|ref|YP_002786275.1| (S)-2-hydroxy-acid oxidase [Deinococcus deserti VCD115] gi|226318525|gb|ACO46521.1| putative (S)-2-hydroxy-acid oxidase (Glycolate oxidase); putative L-lactate dehydrogenase (cytochrome) (Lactic acid dehydrogenase) [Deinococcus deserti VCD115] Length = 359 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 120/353 (33%), Gaps = 75/353 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTG---- 66 + + N+ F L R L + +D S E LG LSFP+ I+ +M G Sbjct: 35 ANDEHTLRANRASFSRVKLRPRVL--VDVSHIDLSTEVLGLPLSFPVGIAPCAMHGLVHP 92 Query: 67 -------------GN----NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE 109 G+ + M + ++A AA Q ++ D + Sbjct: 93 EAEVATATAAAAAGSLATLSTMSHKPIEDVAQAAAGRMWF-----QLYLYRDREVSRDLV 147 Query: 110 LRQYAP---------HTVLISN-----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 R A T + + L + + HL+ Sbjct: 148 QRAEAAGARALVLTVDTPFLGRREVMLRSPLHLPEGMSLPNVGRRQPGTE------HLDD 201 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 L + N + + + L S +P++LK + ++ D L ++SG + ++ Sbjct: 202 LNYL---NTLFDPSMNWRDLEWLRSVTRLPIVLKGIH---TAEDAALTVESG-GHVWVSN 254 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + ++ +I + A+ GG+ G D+LK Sbjct: 255 HGGRQLDTAVTPLEVLPEI-----------------VQAVQGRAEIYLDGGITRGTDVLK 297 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA L L A+ V +E LR+E ++M L G R+ EL Sbjct: 298 AVALGARAVFLGRAPLYGLALAGEAGVRHTLELLREELQLAMALCGKVRLAEL 350 >gi|153008779|ref|YP_001369994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ochrobactrum anthropi ATCC 49188] gi|151560667|gb|ABS14165.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ochrobactrum anthropi ATCC 49188] Length = 381 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WNDVAWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VDAVGDKIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D V A++ +RKE ++M L G + + ++ + Sbjct: 335 YGLGAMGQDGVTLALDIIRKELDITMALCGKRDINDIDKS 374 >gi|254695934|ref|ZP_05157762.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|261216362|ref|ZP_05930643.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|260917969|gb|EEX84830.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 3 str. Tulya] Length = 381 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|311104474|ref|YP_003977327.1| FMN-dependent dehydrogenase family protein 1 [Achromobacter xylosoxidans A8] gi|310759163|gb|ADP14612.1| FMN-dependent dehydrogenase family protein 1 [Achromobacter xylosoxidans A8] Length = 391 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 58/176 (32%), Gaps = 25/176 (14%) Query: 162 PNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 PNG D I + L+LK V + D L +G ++ GG Sbjct: 229 PNGFRGERDKLSWEHIRWIRENWPGKLVLKGV---MHPDDARLACAAGADGVIVSNHGGR 285 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 S D+ + + GG R G D+LK++ L Sbjct: 286 QLDGCISPLQALPDV-----------------VAAVPSGFPVMVDGGFRRGSDVLKAVAL 328 Query: 280 GASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 GA + P L A+ S + E R E +M LLG + +L LI Sbjct: 329 GARMVFTGRPQLFGAAVAGSAGIRKVAEIFRSEISTNMALLGCATLADL--TPDLI 382 >gi|163739062|ref|ZP_02146475.1| L-lactate dehydrogenase (cytochrome) [Phaeobacter gallaeciensis BS107] gi|161387867|gb|EDQ12223.1| L-lactate dehydrogenase (cytochrome) [Phaeobacter gallaeciensis BS107] Length = 388 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 118/371 (31%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + + +G+ +S P+ ++ + TG Sbjct: 33 EQTFRDNTNDFEKIRLRQRV--AVDMAGRSTASQMIGQDVSMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FE---------LRQYAPHT-- 117 I A AAE V + + + + A + F+ +R+ Sbjct: 90 EI--KAARAAETFGVPFTLSTMSINSIEEVAEATTKPFWFQLYTMKDDDYVRRLIQRAKD 147 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQAVHVLGADGL-----------FLHLNPLQ 157 + + LG + G+ + A+ + N Sbjct: 148 ARCSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWSWGLQMLSAKRRNFGN 207 Query: 158 EIIQPNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + G ++ + L SKIA L D ++LK + L D ++ Sbjct: 208 IVGHVEGISDASSLGAWTAEQFDPSLDWSKIAKLIELWDGKVILKGI---LDVEDAKMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + I ++ + Sbjct: 265 KLGADAIVVSNHGGRQLDGALSSIQMLPAIMD-----------------AVGDQIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ V A+E L KE +M L G K Sbjct: 308 SGIRSGQDVLKALALGAKGTMIGRAFVYGLGAMGQHGVTRALEVLHKELDTTMALCGEKS 367 Query: 324 VQELYLNTALI 334 V +L + L+ Sbjct: 368 VADLGRHNLLV 378 >gi|84685086|ref|ZP_01012985.1| putative l-lactate dehydrogenase (cytochrome) protein [Maritimibacter alkaliphilus HTCC2654] gi|84666818|gb|EAQ13289.1| putative l-lactate dehydrogenase (cytochrome) protein [Rhodobacterales bacterium HTCC2654] Length = 381 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 57/375 (15%), Positives = 112/375 (29%), Gaps = 87/375 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT------- 65 + + RN FD L+ L +V+ SVE +G+KL+ P +S Sbjct: 32 ADDEVTMRRNSAAFDAVDLVPHVLRGT--KDVELSVEVMGQKLALPFYLSPTALQRLFHH 89 Query: 66 ----------------------GGNN------------------KMIERINRNLAIAAEK 85 G + +NR + A++ Sbjct: 90 DGERAVAAAAAKYGTMFGVSSLGTTSLEELRRTHDTPQVYQFYFHKDRGLNRAMMQRAKE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V + V S + + F + P + ++ + + +G+ Sbjct: 150 AGVDVMMLTVDSMTGGNRERDKRTGFSI----PFKLTLAGMAQFAMKPAWGINYVTH--E 203 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGLS 196 L H++ + F ++ +A + D LK V + Sbjct: 204 KFSLPQLDDHVDMGGGAMS--IGRYFTEMLDPTMNWEDLAEMIELWDGKFCLKGV---IH 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D G ++ G R L+ + GI Sbjct: 259 PDDAARAADLGCDAVVLSNHAG---------RQLDGSLAPFDALGGI--------VDQVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 ++ + G++ G I+K++ +GA G+ +L P A V + L+ E Sbjct: 302 DKLDVMMDSGIQRGTHIIKALAMGAKAVGIGRGYLFPLAAAGQAGVERMVGLLKDEVERD 361 Query: 316 MFLLGTKRVQELYLN 330 M L+G ++ +L + Sbjct: 362 MRLMGAAKISDLTRD 376 >gi|307309135|ref|ZP_07588812.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] gi|306900449|gb|EFN31064.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti BL225C] Length = 381 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 112/362 (30%), Gaps = 69/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + N+ F L L E D + +LGK+ P ++ + G + Sbjct: 31 EEETMRANRSDFSRLTLRQNVLVEPQPQ--DLATAYLGKRHPLPFMLGPV-GFLGLYSGK 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRV-------------------MFSDHNAIKSF--ELRQY 113 AA + + + + + D + + F Sbjct: 88 GEVKAVRAAHAAGIPFCLSTFSIASLADLRIVTDGPLHFQLYVLEDRSLCEEFLRAAEYA 147 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF-LHLNP--LQEII---QP----- 162 T+ ++ A+ + V+ +++ + D L L L P L E++ P Sbjct: 148 GVDTLFVTVDTAITGIRERDVRNGFRSLTRVTPDLLARLALKPRWLAEVVLAGMPSVRAI 207 Query: 163 NGNTNF-ADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGI 208 F + A LS +D L K++ L+ D G Sbjct: 208 EHRPEFGRGALEQAANLSRRIDKTLSWKDIAWLRERWTGKLVIKGVLTPADAVRARDLGC 267 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGL 267 ++ GG T +L R + + GG+ Sbjct: 268 DGVVVSNHGGRQLDGAP------------------STIRALPSIRATVGTDFCLMLDGGI 309 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D++K+I LGA L + V I L +E +S+ L+G V++ Sbjct: 310 RRGADVIKAIALGADGVMLGRAYAYGLSAAGQAGVAEVIAILEREISISLALMGIASVEQ 369 Query: 327 LY 328 L Sbjct: 370 LK 371 >gi|297159022|gb|ADI08734.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 386 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 22/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S ++PL+LK + D+ G+ + GG Sbjct: 242 WDDLPWLRSITNLPLILKGICH---PDDVRRAKDGGVDGIYCSNHGGRQ----------- 287 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P +L + + G+R G D++K++ LGA+ G+ P+L Sbjct: 288 -------ANGGLPALNALPEVVEAADGLPVLFDSGVRTGADVIKALALGATAVGIGRPYL 340 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ +D VV + SL E + M + G + +L Sbjct: 341 YGLALAGADGVVHVLRSLLAEADLLMAVDGYPTLADL 377 >gi|323524931|ref|YP_004227084.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1001] gi|323381933|gb|ADX54024.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1001] Length = 411 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 118/369 (31%), Gaps = 74/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ FD+ + R L ++ + + S LG++ + P +I TG + M Sbjct: 40 AETEATLRRNRDVFDEIAFLPRTL--VNVEHRNQSSTLLGQRTASPFMIGP-TGYSGLMF 96 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHT---VL 119 + LA AA + + + + + ++ + R++ L Sbjct: 97 REGDVQLASAAAAAGIPFVLSNASTVALEEVVQRAGGRVWMQVYMYRTREFVAKLAQRSL 156 Query: 120 ISNLGAVQLNYDFGVQKAHQ----------AVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + + A+ + D V + + + H + ++ P+G FA Sbjct: 157 AAGIEALVVTTDSAVFGKREWDLRNYIKPLMLDWRNKFDVLGHPRWMSNVLWPSGMPRFA 216 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L L++K V L + D Sbjct: 217 NLGDLLPPGQTSVKGATITLGQQLDPSLSWDDIRWLRDLWPKRLVVKGV---LGAPDALR 273 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +++G+ ++ GG S D+ ++ + Sbjct: 274 AIEAGVDGIVLSNHGGRQLDGAVSAMDVLPEV-----------------VDQVRGRLAVM 316 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG R G DILK++ LGA L AI+ L+ E + LLG Sbjct: 317 LDGGFRRGSDILKAVALGADAVLLGRATTYGLSAGGQPGAARAIQILQTEVDRGLGLLGC 376 Query: 322 KRVQELYLN 330 + L + Sbjct: 377 SDIAALDRS 385 >gi|158423243|ref|YP_001524535.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158330132|dbj|BAF87617.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 378 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 112/342 (32%), Gaps = 70/342 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N+ +D L+ R L + + +G L P+L++ + R+ Sbjct: 54 ANRAAYDRLRLLPRVLS--DLSKATTRINLMGFALEHPILLAPVA------YHRLFHPDG 105 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A A+A Q + A S E + A L L +Q ++ F V +A Sbjct: 106 ELATAQGAAIA---QAPLVVSTQASTSLEEVRAASRGQLWFQL-YIQPDWGFTVNLLRRA 161 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFA------------------------------- 169 G + L ++ + F+ Sbjct: 162 -EAAGYSAVVLTVDAPVSLRTQERRAGFSLPPGVEAVNLAGLKPRPLHSGGIGSSPLFGT 220 Query: 170 -----DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 L +A L S +P+LLK V L+ D L G+ ++ GG + Sbjct: 221 ALPHTPLWGDVARLRSLTRLPILLKGV---LAPDDASRALAEGVDGIIVSNHGGRVLDSL 277 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + + I + + GG+R G DILK++ LGA+ Sbjct: 278 PASIEALPRIVETLEG-----------------RIPVLVDGGIRRGTDILKAMALGANAV 320 Query: 285 GLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + P++ A+ + V A+ LR E V+M L G + Sbjct: 321 MIGRPYIHALAVAGAAGVAHAMHVLRAELEVAMALTGRPTLD 362 >gi|254511974|ref|ZP_05124041.1| lactate dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221535685|gb|EEE38673.1| lactate dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 388 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 123/371 (33%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+D L R + + + +G+ +S P+ ++ + TG + E Sbjct: 33 EQTFRENSSDFEDIRLRQRV--AVDMTGRSTASQMIGQDVSMPVALAPVGLTGMQHADGE 90 Query: 74 RINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFE---------LRQYAPHT-- 117 A AAE+ V M++ S + NA F+ +R+ Sbjct: 91 M---KAAKAAEEFGVPFTLSTMSINSIEDVAEYTNAPFWFQLYTMKDEDYIRRLIQRAKD 147 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQA---------------VHVLGAD-----G 148 + + LG + G+ + + +L A Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWAWGIEMLSAKRREFGN 207 Query: 149 LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H++ + + + + K+ L ++LK + L + D ++ Sbjct: 208 IVGHVDSITDTSSLGTWTAEQFDPSLDWKKVEKLMEQWGGKVILKGI---LDADDAKMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + +I + + Sbjct: 265 KLGADAIVVSNHGGRQLDGALSSIRVLPEIMD-----------------AVGGDIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ V A+E +++E +M L G + Sbjct: 308 SGIRSGQDVLKALALGAKGTYIGRAFVYGLGAMGQKGVTTALEIIQRELDTTMALCGERN 367 Query: 324 VQELYLNTALI 334 V +L + LI Sbjct: 368 VTKLGRHNLLI 378 >gi|294633184|ref|ZP_06711743.1| peroxisomal (S)-2-hydroxy-acid oxidase [Streptomyces sp. e14] gi|292830965|gb|EFF89315.1| peroxisomal (S)-2-hydroxy-acid oxidase [Streptomyces sp. e14] Length = 277 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 21/167 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + +P+L+K V L D L ++ G ++ GG + + D Sbjct: 128 WQDLDEIVRGTPLPVLVKGV---LHPADARLAVEHGAAGVLVSNHGGRQCDTVPAALDCL 184 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 + + GG+R G DI ++ LGA G+ P Sbjct: 185 PAVAD-----------------AVAGRVPVLMDGGVRRGADIAVALALGARAVGVGRPVV 227 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A V + LR E+ ++ L G +R +L + + R + Sbjct: 228 WGLAAAGESGVRRVLALLRDEYDHTLALCGGRRNADLTRDMVVRRGE 274 >gi|293390386|ref|ZP_06634720.1| L-lactate dehydrogenase LctD [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950920|gb|EFE01039.1| L-lactate dehydrogenase LctD [Aggregatibacter actinomycetemcomitans D7S-1] Length = 381 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 117/369 (31%), Gaps = 73/369 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN ++ L R L ++D +E G++LS P +++ + G R Sbjct: 31 AEQTLKRNVNDLENIALRQRVLK--DMSQLDTQIELFGEQLSIPAILAPV-GALGMYARR 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQLN 129 A AA + + + + + A K F+L + A++ Sbjct: 88 GEVQAAKAAASRNIPFTLSTVSICSIEEVAPKIDRPMWFQLYVLKDRGFMR---NALERA 144 Query: 130 YDFGVQKAHQAVHVL--GADGLFLH------LNPLQEIIQPNGNTNFAD----------- 170 G V + GA +H ++ IIQ + +A Sbjct: 145 KAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRIIQGITHPFWAWDVGVKGKPHTL 204 Query: 171 ------------LSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLK 205 L I L+ D + K++ L D + + Sbjct: 205 GNVSHYMGKQIGLDDYIGWLTENFDPSISWKDLEWIREFWDGPMIIKGILDPKDAKDAVL 264 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG + S I E + +A Sbjct: 265 FGADGIVVSNHGGRQLDGVLSSARALPPIAE-----------------AVKGEIKILADS 307 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+DI++ I LGA + F+ V ++ +KE V+M L +++ Sbjct: 308 GIRNGLDIVRMIALGADACMIGRSFVYALGAAGQLGVENMLDIFKKEMHVAMTLTSNQKI 367 Query: 325 QELYLNTAL 333 ++ + + Sbjct: 368 SDITKDALV 376 >gi|306846130|ref|ZP_07478692.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO1] gi|306273381|gb|EFM55242.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO1] Length = 381 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|16125403|ref|NP_419967.1| L-lactate dehydrogenase [Caulobacter crescentus CB15] gi|221234146|ref|YP_002516582.1| L-lactate dehydrogenase [Caulobacter crescentus NA1000] gi|81856327|sp|Q9A943|LLDD_CAUCR RecName: Full=L-lactate dehydrogenase [cytochrome] gi|259494968|sp|B8H3Q5|LLDD_CAUCN RecName: Full=L-lactate dehydrogenase [cytochrome] gi|13422469|gb|AAK23135.1| L-lactate dehydrogenase [Caulobacter crescentus CB15] gi|220963318|gb|ACL94674.1| L-lactate dehydrogenase (FMN-linked) [Caulobacter crescentus NA1000] Length = 383 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 115/369 (31%), Gaps = 75/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN D L R L + VDPS G + + P+ ++ + G Sbjct: 29 AYAERTMARNIDDLADIALRQRVL--MDVSVVDPSTTLFGVRQALPVALAPV-GLTGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL---- 123 R A AA V + + V D S F+L + L Sbjct: 86 RRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARAS 145 Query: 124 --GAVQL--NYDFGVQKAHQAVH---VLGADGLFLHL----------------------- 153 GA L D V A + G + L Sbjct: 146 AAGATTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLVQAALKPAWAWDVGVMGHPHRLG 205 Query: 154 NPLQEIIQPNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + + +G +F + + + A PL++K V L D + Sbjct: 206 NVAPALGKASGLQDFMGWLAANFDPSIQWSDLKWIRDAWKGPLVIKGV---LDPEDAKAA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 G ++ GG + + + +L +A + + Sbjct: 263 ADIGADGVVVSNHGGRQLDGV------------------LSSARALPAIADAVGDRLTVL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGT 321 A GG+R+G+D+++ + LGA + + +A V ++ + KE V+M L G Sbjct: 305 ADGGVRSGLDVVRMLALGARGVLIGRAYAYALAARGEAGVTQLLDLIDKEMRVAMALTGV 364 Query: 322 KRVQELYLN 330 + V + Sbjct: 365 RDVASINET 373 >gi|115526164|ref|YP_783075.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisA53] gi|115520111|gb|ABJ08095.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisA53] Length = 379 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 119/373 (31%), Gaps = 80/373 (21%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 DH + + + N R L + + D S + +G++ + PL+++ + G Sbjct: 27 DHGSYA--EETLRANVDDLKKIKFRQRIL--VDIGKRDLSTDIIGERANLPLILAPV--G 80 Query: 68 NNKMIERINRNLA-IAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 + M LA AA + M++ S + ++ F+L + + Sbjct: 81 STGMQHGDGEILACRAAHAAGIPYTLSTMSICSIEDVAANVEKPFWFQLYVMRDRGFVKA 140 Query: 122 --------------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 +G + G+ + + + ++ I+ Sbjct: 141 LIERAIAAKCSALVLTVDLQVIGQRHQDIKNGMSVPPEIFKLKNIIDIATKPGWVKGILG 200 Query: 162 PNGNTNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGL 195 + NF ++ I + S L++K + L Sbjct: 201 AK-SRNFGNIAGHLPGSKDLGSVSAWVASQFDPSLNWKDIDWIRSIWPGKLIIKGI---L 256 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D L +K+G ++ GG S ++ I + Sbjct: 257 DVEDAALAVKAGAEALVVSNHGGRQLDGAPSSIEVLPQI-----------------VEQF 299 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIV 314 + + GG+R+G D+++++ LGA + ++ V AI+ ++ E Sbjct: 300 GHRIEIQFDGGIRSGQDVMRALALGAKSCMIGRAYIYGLGAFGGPGVAKAIDIIKNELST 359 Query: 315 SMFLLGTKRVQEL 327 +M L G + E+ Sbjct: 360 TMALCGVNSIAEI 372 >gi|23500647|ref|NP_700087.1| L-lactate dehydrogenase [Brucella suis 1330] gi|62317254|ref|YP_223107.1| L-lactate dehydrogenase LldD [Brucella abortus bv. 1 str. 9-941] gi|83269235|ref|YP_418526.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis biovar Abortus 2308] gi|148558478|ref|YP_001257841.1| L-lactate dehydrogenase [Brucella ovis ATCC 25840] gi|161620972|ref|YP_001594858.1| L-lactate dehydrogenase (cytochrome) [Brucella canis ATCC 23365] gi|163845035|ref|YP_001622690.1| hypothetical protein BSUIS_B0912 [Brucella suis ATCC 23445] gi|189022515|ref|YP_001932256.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus S19] gi|254690761|ref|ZP_05154015.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254698540|ref|ZP_05160368.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254703239|ref|ZP_05165067.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|254705616|ref|ZP_05167444.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|254710846|ref|ZP_05172657.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|254720217|ref|ZP_05182028.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|254731987|ref|ZP_05190565.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256029229|ref|ZP_05442843.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|256058916|ref|ZP_05449130.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|256255944|ref|ZP_05461480.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260167677|ref|ZP_05754488.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|260544492|ref|ZP_05820313.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus NCTC 8038] gi|260567827|ref|ZP_05838296.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 4 str. 40] gi|260756332|ref|ZP_05868680.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260759760|ref|ZP_05872108.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260762999|ref|ZP_05875331.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260882156|ref|ZP_05893770.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|261313026|ref|ZP_05952223.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261318419|ref|ZP_05957616.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|261322853|ref|ZP_05962050.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|261753870|ref|ZP_05997579.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|261757113|ref|ZP_06000822.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|265985227|ref|ZP_06097962.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|265986217|ref|ZP_06098774.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|297249301|ref|ZP_06933002.1| L-lactate dehydrogenase (cytochrome) [Brucella abortus bv. 5 str. B3196] gi|306838641|ref|ZP_07471477.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. NF 2653] gi|23464291|gb|AAN34092.1| L-lactate dehydrogenase [Brucella suis 1330] gi|62197447|gb|AAX75746.1| LldD, L-lactate dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|82939509|emb|CAJ12481.1| FMN-dependent alpha-hydroxy acid dehydrogenase:FMN/related compound-binding core [Brucella melitensis biovar Abortus 2308] gi|148369763|gb|ABQ62635.1| L-lactate dehydrogenase [Brucella ovis ATCC 25840] gi|161337783|gb|ABX64087.1| L-lactate dehydrogenase (cytochrome) [Brucella canis ATCC 23365] gi|163675758|gb|ABY39868.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021089|gb|ACD73810.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus S19] gi|260097763|gb|EEW81637.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus NCTC 8038] gi|260154492|gb|EEW89573.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 4 str. 40] gi|260670078|gb|EEX57018.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260673420|gb|EEX60241.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|260676440|gb|EEX63261.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260871684|gb|EEX78753.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella abortus bv. 9 str. C68] gi|261297642|gb|EEY01139.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis B2/94] gi|261298833|gb|EEY02330.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella neotomae 5K33] gi|261302052|gb|EEY05549.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M163/99/10] gi|261737097|gb|EEY25093.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. F5/99] gi|261743623|gb|EEY31549.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 3 str. 686] gi|264658414|gb|EEZ28675.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella pinnipedialis M292/94/1] gi|264663819|gb|EEZ34080.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. 83/13] gi|297173170|gb|EFH32534.1| L-lactate dehydrogenase (cytochrome) [Brucella abortus bv. 5 str. B3196] gi|306406284|gb|EFM62527.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. NF 2653] Length = 381 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|85711685|ref|ZP_01042742.1| L-lactate dehydrogenase [Idiomarina baltica OS145] gi|85694545|gb|EAQ32486.1| L-lactate dehydrogenase [Idiomarina baltica OS145] Length = 390 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 108/374 (28%), Gaps = 71/374 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F W L R L + ++ +V LG+ + PL + + G M Sbjct: 33 AFAEQTAHANVHSFSRWRLQQRVL--RDVEHINLAVNRLGQSYAAPLALGPV-GLAGMMA 89 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 R AA+ + + + + + ++ VQL Sbjct: 90 RRGETQAYRAAQHEHIPFCASTVSLCGINEIHQHRDTQPAWFQLYMMRDREFVVQLLDRV 149 Query: 133 GVQKAHQAVHVLGADGLFL----------------------------------------H 152 Q V + L + H Sbjct: 150 QAQGVEVLVVTVDLAVLGVRYRDVRNGFESSTGLAKLKRFYDFVSHPQWLWDVGLKGGPH 209 Query: 153 L--NPLQEIIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + N + T+F IA + S L++K + L S D Sbjct: 210 VFGNLTDAVPNARQLTDFKSWVDAQFDPRVTWDDIAWIRSRWPGKLVIKGI---LHSDDA 266 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +K G I+ GG D+ +I + G + Sbjct: 267 LKAVKVGADGLIISNHGGRQLDGAPCPIDILPEIHQHLLNQG------------CRERIE 314 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLL 319 GGLRN D+L ++ LGA G L ++ + V ++ +K VS+ L+ Sbjct: 315 LWLDGGLRNPQDLLIALALGADGGLLGRAWIYALAGYGEFGVTQLLKQWQKALSVSLALM 374 Query: 320 GTKRVQELYLNTAL 333 G + +L + + Sbjct: 375 GCNDINQLNESHLI 388 >gi|306841520|ref|ZP_07474218.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO2] gi|306288357|gb|EFM59716.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella sp. BO2] Length = 382 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 236 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 293 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 335 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 336 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 375 >gi|225629376|ref|ZP_03787409.1| FMN-dependent dehydrogenase [Brucella ceti str. Cudo] gi|237816814|ref|ZP_04595806.1| L-lactate dehydrogenase [cytochrome] [Brucella abortus str. 2308 A] gi|294853868|ref|ZP_06794540.1| L-lactate dehydrogenase [Brucella sp. NVSL 07-0026] gi|225615872|gb|EEH12921.1| FMN-dependent dehydrogenase [Brucella ceti str. Cudo] gi|237787627|gb|EEP61843.1| L-lactate dehydrogenase [cytochrome] [Brucella abortus str. 2308 A] gi|294819523|gb|EFG36523.1| L-lactate dehydrogenase [Brucella sp. NVSL 07-0026] Length = 382 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 236 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 293 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 335 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 336 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 375 >gi|218671010|ref|ZP_03520681.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli GR56] Length = 208 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + + + + L++K + + D +G ++ GG Sbjct: 57 GRRDHLNW-AHLEQIRKRWSGKLVVKGI---MHPEDAARAADTGADGVIVSNHGGRQLDG 112 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S + +I + + GG+R G DI+K++ LGA Sbjct: 113 TASPLQVLPEIAA-----------------RVGDSIAVMVDGGIRRGTDIMKALALGARF 155 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + PFL A+ V+ A + L+ E +M LLG +V ++ Sbjct: 156 VFVGRPFLYAAAVAGLPGVLRAADILKAELHSNMALLGVTKVADI 200 >gi|126919|sp|P20932|MDLB_PSEPU RecName: Full=(S)-mandelate dehydrogenase; AltName: Full=L(+)-mandelate dehydrogenase; Short=MDH gi|151355|gb|AAC15503.1| S-mandelate dehydrogenase [Pseudomonas putida] Length = 393 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 102/363 (28%), Gaps = 74/363 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ F W + L + E LGK+ S PLLI TG N + Sbjct: 31 AEDEYGVKHNRDVFQQWRFKPKRL--VDVSRRSLQAEVLGKRQSMPLLIGP-TGLNGALW 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM---------------------------------- 98 + + LA AA K + + + M Sbjct: 88 PKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIHREIAQGMVLKALH 147 Query: 99 -------FSDHNAIKSFELRQYA-----PHTVLISNLGAVQLNYDFGVQKAHQ-AVHVLG 145 + A+ + R P + + L+ + + + Sbjct: 148 TGYTTLVLTTDVAVNGYRERDLHNRFKIPMSYSAKVVLDGCLHPRWSLDFVRHGMPQLAN 207 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 +Q + + + L LL+K + LS+ D + + Sbjct: 208 FVSSQTSSLEMQAALMSRQMDASFNW-EALRWLRDLWPHKLLVKGL---LSAEDADRCIA 263 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG D I P+ + + Sbjct: 264 EGADGVILSNHGGRQL------------------DCAIS-PMEVLAQSVAKTGKPVLIDS 304 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G R G DI+K++ LGA L L A V + L+ + ++ +G + Sbjct: 305 GFRRGSDIVKALALGAEAVLLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDI 364 Query: 325 QEL 327 L Sbjct: 365 TSL 367 >gi|254700120|ref|ZP_05161948.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] gi|261750612|ref|ZP_05994321.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] gi|261740365|gb|EEY28291.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella suis bv. 5 str. 513] Length = 381 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|256015681|ref|YP_003105690.1| L-lactate dehydrogenase [Brucella microti CCM 4915] gi|255998341|gb|ACU50028.1| L-lactate dehydrogenase [Brucella microti CCM 4915] Length = 381 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|322708871|gb|EFZ00448.1| oxidoreductase [Metarhizium anisopliae ARSEF 23] Length = 411 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 114/363 (31%), Gaps = 70/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D ++ F W ++ R L + D S G+K P+L++ + G Sbjct: 59 AGESSTMDADRLAFRQWKIVPRVLTPTTPR--DLSTTLFGEKYDTPVLMAPI--GVQSWY 114 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMF------SDHNAIKSFEL-----RQYAPHTVL 119 ++ + A A +V + + K F+L + + Sbjct: 115 HD-DKEVGTATACANLRVPFTLSTAASTNIEELVEKVPRGPKWFQLYWPLDEEITASILT 173 Query: 120 ISNLGA-------------VQLNYDFGVQKAHQAV---HVLGADGLFLHLNPLQEIIQ-- 161 + + YD V +G + Q Sbjct: 174 RAKVSGFKVLVVTLDTWTLAWRPYDLDPASVPFIVGEGDDVGFNDPVFRQKFAQRTDGET 233 Query: 162 PNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + A + + +L D P++LK + LS D L ++ G+ Sbjct: 234 PEESKVQAGMYWCSEVFPGVSRSWEDLKILRRYWDGPIVLKGI---LSVEDARLAVEHGM 290 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG D+ DI ++ + G+R Sbjct: 291 DGLIVSTHGGRQLDGAVGTLDVLPDIAD-----------------AVGDKITVMIDSGIR 333 Query: 269 NGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DILK++ LGA L P + +D + A I + +F ++M G K + ++ Sbjct: 334 TGADILKAVALGAKGVFLGRPVVYGLGIDGAAGAEAVIAGILADFDLTMGFCGAKTIADI 393 Query: 328 YLN 330 + Sbjct: 394 KRS 396 >gi|254490988|ref|ZP_05104170.1| FMN-dependent dehydrogenase superfamily [Methylophaga thiooxidans DMS010] gi|224463897|gb|EEF80164.1| FMN-dependent dehydrogenase superfamily [Methylophaga thiooxydans DMS010] Length = 369 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 123/349 (35%), Gaps = 57/349 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + ++RN++ D+ + L + + D LG+K PLL++ + + + Sbjct: 44 DEITLNRNRQKLDEILINPSLLQDCTNGGTDTVC--LGEKFRHPLLLAPVA---FQQLAH 98 Query: 75 INRNLAIAAEKTKV--AMAVGSQR-----VMFSDHNAIKSFEL-----RQYAPHTVLISN 122 + +A A + M V + + + K F+L R + V + Sbjct: 99 PDGEIATAQAADLLETGMIVSTLATQPLEDIAENLTQPKWFQLYIQQSRDFTLSLVQRAE 158 Query: 123 -----------------LGAVQLNYDFGVQKAHQAVHVLGADGLFL-HLNPLQEIIQPNG 164 + F + + AV++ L +P Q ++ Sbjct: 159 KAGYTKLVVTIDAPLHGIRNRAQRAGFVLPEGISAVNLKDRPPLPRQSFDPSQSVVFQGM 218 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + IA L +P++LK V LS D GI ++ GG + + Sbjct: 219 MSEAPTWDD-IAWLQQQTSLPIILKGV---LSVDDAIKAKAMGIAGIVVSNHGGRTLDCL 274 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + ++ + + + + G + G DI K++ LGA+L Sbjct: 275 PASIEMLP-----------------LIRQAVGPDYPLVFDGAVERGTDIFKALALGANLV 317 Query: 285 GLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P F A+ + V + LR+E V M L GT ++ +++ + Sbjct: 318 CVGRPQFYALAVAGALGVAHLLRVLREELEVCMSLAGTPQIADIHADKL 366 >gi|225686679|ref|YP_002734651.1| FMN-dependent dehydrogenase [Brucella melitensis ATCC 23457] gi|256043786|ref|ZP_05446708.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. Rev.1] gi|256111169|ref|ZP_05452205.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 3 str. Ether] gi|256262188|ref|ZP_05464720.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260564971|ref|ZP_05835456.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265990213|ref|ZP_06102770.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|265992680|ref|ZP_06105237.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|225642784|gb|ACO02697.1| FMN-dependent dehydrogenase [Brucella melitensis ATCC 23457] gi|260152614|gb|EEW87707.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|262763550|gb|EEZ09582.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|263000882|gb|EEZ13572.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|263091884|gb|EEZ16206.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella melitensis bv. 2 str. 63/9] Length = 381 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGNEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|254712680|ref|ZP_05174491.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] gi|254715750|ref|ZP_05177561.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261217510|ref|ZP_05931791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261320385|ref|ZP_05959582.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] gi|260922599|gb|EEX89167.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M13/05/1] gi|261293075|gb|EEX96571.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M644/93/1] Length = 381 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 235 WSDVKWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|124268014|ref|YP_001022018.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] gi|124260789|gb|ABM95783.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] Length = 388 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 107/363 (29%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R ++ + G+ + P++I+ TG G Sbjct: 33 EGTYRANETDFARILLRQRV--AVNMEGRSLRTTLAGQDCAMPVVIAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTV---LI 120 I A AAE V + + + + A + F+L R + + Sbjct: 90 EILG--ARAAEAFGVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMERLIERAKA 147 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 + A+ L D V + + A+ + L + P + + Sbjct: 148 ARCSALVLTLDLQV-LGQRHKDLKNGMTAPPKPTLANLINLAMKPRWCLGMAGTRRHSFG 206 Query: 171 ---------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +A + L+LK + + D +L Sbjct: 207 NLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGI---MEVADAKLA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I + + Sbjct: 264 ADSGADAIVVSNHGGRQLDGAPSSIAALPAIAE-----------------AVGDRIEVWM 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + FL V A+E +R E ++M G Sbjct: 307 DGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAMGQAGVTRALEIIRNELDITMAFTGHT 366 Query: 323 RVQ 325 ++ Sbjct: 367 DIR 369 >gi|17988722|ref|NP_541355.1| L-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. 16M] gi|17984534|gb|AAL53619.1| l-lactate dehydrogenase (cytochrome) [Brucella melitensis bv. 1 str. 16M] gi|326411071|gb|ADZ68135.1| FMN-dependent dehydrogenase [Brucella melitensis M28] gi|326554362|gb|ADZ89001.1| FMN-dependent dehydrogenase [Brucella melitensis M5-90] Length = 382 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG ++ GG S + Sbjct: 236 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISML 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 293 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 335 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ V A+E +RKE ++M L G + + E+ + Sbjct: 336 YGLGAMGNEGVTLALEIIRKEMDITMALCGKRDINEIDKS 375 >gi|329907273|ref|ZP_08274592.1| L-lactate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gi|327547055|gb|EGF31940.1| L-lactate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 378 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 114/363 (31%), Gaps = 77/363 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 + N F+D R I+ + G+ + P+ I+ MTG Sbjct: 30 SETTYRANVSDFNDLKFRQRV--AINMENRSLKTTMAGQDAAMPVAIAPCGMTGMQRADG 87 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVL-------- 119 E + A AAE+ V M++ S + ++ + F+L + Sbjct: 88 EILA---ARAAEQFGVPFTLSTMSIASIEDVAANTSKPFWFQLYVMKDRGFVNDLIDRAK 144 Query: 120 ------------ISNLGAVQLNYDFGVQKAHQA-----VHVLGADGLFLHL--------- 153 + LG + G+ + V+++ G + + Sbjct: 145 AAKCSALVLTLDLQILGQRHKDLKNGLSAPPKLTLPNIVNMMTKPGWCMGMLGTKRRTFG 204 Query: 154 NPLQEIIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + + ++ + + + L+LK + + D +L Sbjct: 205 NIVGHVKGVENMSSLSAWTAQQFDPALSWDDVQWIKDKWGGKLILKGI---MDPEDAQLA 261 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++SG ++ GG S + + + Sbjct: 262 MRSGADALIVSNHGGRQLDGAASSIAALPGV-----------------IEAVGDGIEVHM 304 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+L+++ LGA + P L + V +E + KE ++M L G Sbjct: 305 DGGVRSGQDVLRAVALGARGVYIGRPVLYGLGAMGGEGVSKCLELIHKELDITMALCGQT 364 Query: 323 RVQ 325 ++ Sbjct: 365 DIR 367 >gi|316935836|ref|YP_004110818.1| L-lactate dehydrogenase [Rhodopseudomonas palustris DX-1] gi|315603550|gb|ADU46085.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris DX-1] Length = 379 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 117/372 (31%), Gaps = 78/372 (20%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 DH + + + N R L +IS E S LG + PL+++ + G Sbjct: 27 DHGSYA--EETLRANVDDLKRIKFRQRILVDISKRE--LSTTILGDTYAMPLILAPV--G 80 Query: 68 NNKMIERINRNLA-IAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 + M LA AA+ + M++ S + ++ + F+L + + Sbjct: 81 STGMQHADGEILACRAAQAAGIPYTLSTMSICSIEDVAANVDKPFWFQLYVMRDRGFVKA 140 Query: 122 NL------GAVQLNYDFGVQKAHQAVHVLG-----ADGLFLHLNPLQEIIQPN------- 163 + L +Q Q + LF N L +P Sbjct: 141 LIERAIAAKCSALVLTVDLQVIGQRHQDIKNGMTVPPQLFKLKNVLDIATKPGWVKGILG 200 Query: 164 -GNTNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLS 196 NF ++ I + S L++K + L Sbjct: 201 TPRRNFGNIAGHLPGSKDLESVSAWVASQFDASLNWRDIDWIRSIWPGKLIIKGI---LD 257 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D +K G ++ GG S ++ +I Sbjct: 258 VEDAREAVKVGAEALVVSNHGGRQLDGAPSSIEVLPEI-----------------VHTVG 300 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVS 315 + + + GG+R+G D+++++ LGA + ++ V AI+ + KE + Sbjct: 301 SHIEVLFDGGIRSGQDVMRALALGARSCMIGRAYIYGLGAYGGPGVAKAIDIIGKELSTT 360 Query: 316 MFLLGTKRVQEL 327 M L G + E+ Sbjct: 361 MGLCGVNSIHEI 372 >gi|126727674|ref|ZP_01743506.1| L-lactate dehydrogenase, putative [Rhodobacterales bacterium HTCC2150] gi|126703090|gb|EBA02191.1| L-lactate dehydrogenase, putative [Rhodobacterales bacterium HTCC2150] Length = 388 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 109/370 (29%), Gaps = 75/370 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N FD L R + + +G+ ++ P+ ++ + G Sbjct: 33 EQTFRENVTDFDHIRLRQRV--AVDMSGRSTASTMIGEDVAMPVALAPI-GITGMQCADG 89 Query: 76 NRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVL--------ISN 122 A AAE V M+V S + F+L + + Sbjct: 90 EIKSARAAEAFGVPYTLTTMSVNSIEQVAEATEKPFWFQLYVMRDENFVDTMIERAKAAK 149 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGA----------DGLFLHLNPLQEIIQ----------- 161 A+ L D + + + + + + L P + Sbjct: 150 CSALVLTLDLQI-LGQRHMDIKNGLTTPPKPTLKNIINLSTKPHWGLAMLGAKSWTFGNI 208 Query: 162 ---PNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 G + + L KI + L+LK + L + D + + Sbjct: 209 VGHAKGVDDISSLSSWAAEQFDPTLDWDKIKEIKKKWGGELILKGI---LDAEDAKKAIN 265 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG S + I + + Sbjct: 266 VGADAILVSNHGGRQLDGALSSIRSLAPILD-----------------AVNGKIEVFLDS 308 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ +GA + ++ V A+E + KE +M L G + V Sbjct: 309 GIRSGQDVLKAMAMGADGVFIGRSYIYGLGAMGQKGVTTALEVIHKELDTTMALCGRRDV 368 Query: 325 QELYLNTALI 334 + L + LI Sbjct: 369 KTLDRSDLLI 378 >gi|145589552|ref|YP_001156149.1| L-lactate dehydrogenase (cytochrome) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047958|gb|ABP34585.1| L-lactate dehydrogenase (cytochrome) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 381 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 111/362 (30%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R ++ +G++++ P+ ++ TG G Sbjct: 33 ESTYRANESDFQKIKLRQRV--AVNMTNRTTKTTMVGQEVAMPVALAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVL--------I 120 I A AAEK V + + + + A ++ F+L + Sbjct: 90 EILA--AKAAEKFGVPFCLSTMSICSIEDVAEQTTKPFWFQLYVMKDRGFIERLIERAKA 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNG-NTNFAD 170 + A+ L D ++ A L A+ + + P + F + Sbjct: 148 AKCSALVLTLDLQILGQRHKDLKNGLSAPPKLTIANMINMATKPRWCLGMAMTPRRTFRN 207 Query: 171 LSSK--------------------------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + L++K + L D L Sbjct: 208 IVGHATGVGNMSSLSSWTAEQFDPGLNWGDVEWIKKLWGGKLIIKGI---LDEDDARLAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 SG ++ GG S GI N+ + Sbjct: 265 NSGADALIVSNHGGRQLDGAVSSIQALP---------GI--------VNAVGNDIEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+ LGA + PFL +A V +E + E ++M G + Sbjct: 308 GGIRSGQDVLKAWALGARGTMIGRPFLYGLGAMGEAGVTKCLELIHNELDITMAFTGHRD 367 Query: 324 VQ 325 +Q Sbjct: 368 IQ 369 >gi|91779970|ref|YP_555178.1| putative FMN-dependent dehydrogenase [Burkholderia xenovorans LB400] gi|91692630|gb|ABE35828.1| putative FMN-dependent dehydrogenase [Burkholderia xenovorans LB400] Length = 420 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 115/367 (31%), Gaps = 73/367 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F W LI + L I + D +LG++ P+L+ + G M Sbjct: 33 ANSETTMQSNRLDFAQWALIQKVLAGIQENSTDLGTTYLGERHELPVLLGPV--GFAGMY 90 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------FELRQYAPHTVLI- 120 R A A V S + S +S F R+ H + Sbjct: 91 HRNGEIAAGRAAGKAGIAQVLSTFSIASLEEVAQSHRCSLYFQLYVFRKRELTEHMLERC 150 Query: 121 --SNLGAVQLNYDFGVQKAHQ----------------------------AVHVLGADGLF 150 + +G + L D + + Sbjct: 151 RKAKIGTIFLTVDTPFAPVRERDARNGFRARTTLSPGMLLSMLRHPLWCMGAIANGIPSV 210 Query: 151 LHLNPLQEI--------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + P E+ + + S I L + +++K + L + D Sbjct: 211 GNCKPYPELGSSLMEQSVNLGRMIDPTLAWSDIKWLRDRWEGKIVIKGI---LDADDARR 267 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + +G ++ GG S + +I A+ + + Sbjct: 268 AVDAGANGIVVSNHGGRQLDPAPSTISVLPEI-----------------AKAVGKRTEVL 310 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG+R G D+LK++ LGA+ L ++ + V ++ LR+E ++ ++G Sbjct: 311 MDGGIRRGADVLKALALGATAVLLGRAYIYGLGAGGEKGVTRCLDLLREEMRPALNMMGF 370 Query: 322 KRVQELY 328 + + +L Sbjct: 371 RTIDQLK 377 >gi|256371828|ref|YP_003109652.1| L-lactate dehydrogenase (cytochrome) [Acidimicrobium ferrooxidans DSM 10331] gi|256008412|gb|ACU53979.1| L-lactate dehydrogenase (cytochrome) [Acidimicrobium ferrooxidans DSM 10331] Length = 458 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 105/364 (28%), Gaps = 75/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ F D L VDP+ LG + P + TG M Sbjct: 74 AEAERSMLRNEGSFADVVFRPHVL--RDVSSVDPTWTVLGSPSALPFGFAP-TGFTRMMH 130 Query: 73 ERINRNLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + A + + + + + + + F+L + + V Sbjct: 131 TDGELAVGRVAASLGIPYGLSTVGTTTPEELAAELPHLRRWFQLYVWRDRGPTRA---FV 187 Query: 127 QLNYDFGVQKAHQAVHVLGADGLF------LHLNP-------LQEIIQPNGNTNF----- 168 + + G + V V A L L P LQ + P + +F Sbjct: 188 ERAREAGFEALILTVDVPVAGARMRDVRNGLTLPPTPSLRTFLQGALHPAWSRDFLTKPP 247 Query: 169 ------------------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 I + S +++K V D E Sbjct: 248 VRFASLETGFEGTAGSFIDRMFDPTVTFDDIEWVRSLWSGKIVVKGVQRI---DDAERLA 304 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G+ ++ GG R L+ + + L + + Sbjct: 305 AIGVDAIVVSNHGG---------RQLDRTLAPL--------ALLPIVRERLDGRVEVWVD 347 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D++ +I LGA + +L M + V A L +M LLG + Sbjct: 348 GGVRAGSDVVAAIGLGAQFVLVGRAYLYGLMAGGERGVAVAGRILADGVTRTMALLGIRS 407 Query: 324 VQEL 327 EL Sbjct: 408 FDEL 411 >gi|167567232|ref|ZP_02360148.1| S-mandelate dehydrogenase (MdlB) [Burkholderia oklahomensis EO147] gi|167574803|ref|ZP_02367677.1| S-mandelate dehydrogenase (MdlB) [Burkholderia oklahomensis C6786] Length = 388 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 117/351 (33%), Gaps = 78/351 (22%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIERINRNLAIAAEK 85 + L R L ++ V G+ + P+ I+ M+G + + +LA AA + Sbjct: 47 EIRLHPRRL--VNVSNVTTQAALFGRTYAAPIGIAPVGMSGCFRRGGDL---HLATAAAR 101 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELR--------QYAPHTVLISNLGAVQ-----LNYDF 132 V + + +R + A L+++L A + D Sbjct: 102 ANVPFVMSMASNSTVEEAVAIGGPVRTWFQLYVMEAALSDALLADLRAAGCETLVVTVDV 161 Query: 133 GVQKAHQA-----------------VHVLGADGLFLHLNPLQEIIQPNGNT--NFADLSS 173 V + V VL + H + L ++ N + D + Sbjct: 162 PVSGKRERDLRNGFALPFRLRPAHCVDVLRTPRYWRHGSRLADLRLRNIERVLDVRDPLA 221 Query: 174 KIALLSSA----------------MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + +LL L++K + L + D + +G ++ G Sbjct: 222 QASLLRRQMDMTFDAAALRRIRAAWPGRLIVKGI---LRASDALACVSAGADAIVVSNHG 278 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G S D+ +++ + + G+R G D+LK++ Sbjct: 279 GRQIDSCVSPFDVLAEVADAVR-------------------VPVLVDSGIRCGEDVLKAL 319 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +GASL + P + A+D +D A + L E ++M L G + V + Sbjct: 320 AMGASLVLVGRPAIYGLAVDGADGSEAVLRLLADELRLAMALCGCRSVAAI 370 >gi|240167855|ref|ZP_04746514.1| lactate 2-monooxygenase [Mycobacterium kansasii ATCC 12478] Length = 387 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 112/363 (30%), Gaps = 84/363 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F W + R I+ E D S+E G +L P+ ++ + G G Sbjct: 49 AGDEHTQRANVEAFKRWGVFPRM--GIAPTERDLSIELFGIRLPSPVFMAPI-GVIGVCA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A A+ +T V VG+ + A + L G QL Sbjct: 106 QDGHGDLAAARASARTGVPFFVGTLTADPMEDVAAE------------LGDTPGFFQLYT 153 Query: 131 DFGVQKAHQAVHVLGA---DGLFLHLN-------------------PLQEIIQPNGNTNF 168 + A V A + + L+ P + + F Sbjct: 154 PPDREMATSLVRRAEACGFKAIAVTLDTWVTGWRPRDLSAGNYPQVPSGCLSNYTSDPVF 213 Query: 169 ADLS-----------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + L S D+PL++K + D+ Sbjct: 214 RASLQPGEDATEAAVRKLPIFGGPFRWDDLEWLRSQTDLPLMVKGICH---PDDVRRAKD 270 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ + GG + G+P L + + Sbjct: 271 LGVDGIYCSNHGGRQ------------------ANGGLPALDCLPGVLAAADGLPVLFDS 312 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G DI+K++ +GA+ G+ P+ A+ D +V + SL E + M + G Sbjct: 313 GIRGGADIIKALAMGATAVGIGRPYAYGLALGGVDGIVHVLRSLLAETDLIMAVDGYPSR 372 Query: 325 QEL 327 ++L Sbjct: 373 KDL 375 >gi|256820903|ref|YP_003142182.1| L-lactate dehydrogenase (cytochrome) [Capnocytophaga ochracea DSM 7271] gi|256582486|gb|ACU93621.1| L-lactate dehydrogenase (cytochrome) [Capnocytophaga ochracea DSM 7271] Length = 394 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 107/369 (28%), Gaps = 88/369 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 + N F+ R L + D LG+K+ FP +MT G Sbjct: 36 ESTYRENVSDFNPIKFRQRIL--VDMDNRTLESTLLGQKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R + + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDRDFMKDLIRR 147 Query: 121 SN---------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + LG + G+ + + L + + N Sbjct: 148 AKDAKCSALMITVDLQVLGNRHRDIKNGLSTPPK-FTIPNMINLSTKIPWGLRYVFGNRR 206 Query: 166 TNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F ++ IA + P++LK + ++ D Sbjct: 207 WTFRNIAGHAKNVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG I T +L ++ ++ Sbjct: 264 AIEAVKYGADAIIVSNHGGRQMDDT------------------ISTIKALPDIVSAVGSQ 305 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G G ++LK+ LGA L P + V A++ L E +M Sbjct: 306 TEVWIDSGFYTGQNMLKAWALGAKGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMA 365 Query: 318 LLGTKRVQE 326 G + +Q+ Sbjct: 366 FSGHRNLQD 374 >gi|67903200|ref|XP_681856.1| hypothetical protein AN8587.2 [Aspergillus nidulans FGSC A4] gi|40741431|gb|EAA60621.1| hypothetical protein AN8587.2 [Aspergillus nidulans FGSC A4] gi|259483201|tpe|CBF78386.1| TPA: FMN dependent dehydrogenase, putative (AFU_orthologue; AFUA_1G00500) [Aspergillus nidulans FGSC A4] Length = 400 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 22/184 (11%) Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 QE I+ L D P++LK + + D + ++ G+ + Sbjct: 236 KAAQEWAHTIFPGTSHGWED-ISFLKEHWDGPIVLKGIQ---TVADAKRAIEVGVHGIVV 291 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG ++ +I + + + G+R G DI Sbjct: 292 SNHGGRQQDGGVGSLEVLPEI-----------------VDAVGQKIEVLFDSGVRCGADI 334 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ LGA + + P++ A+ + V I SL + + + L G + LN Sbjct: 335 AKALALGAKMVLVGRPYVYGLAISGQEGVRHVIRSLLGDLQLILHLSGVPDISSRKLNRE 394 Query: 333 LIRH 336 ++R Sbjct: 395 VLRR 398 >gi|120612170|ref|YP_971848.1| L-lactate dehydrogenase [Acidovorax citrulli AAC00-1] gi|120590634|gb|ABM34074.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax citrulli AAC00-1] Length = 378 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 75/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L +D VE G++LS P+ ++ + G Sbjct: 29 AYAEQTLRRNVEDLAAVALRQRVLK--DMSRLDTRVELFGEQLSIPVALAPV-GLTGMFA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA++ V + S V + A + F+L + + L Q Sbjct: 86 RRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPELGRPMWFQLYVLKDRGFMKNALERAQ 145 Query: 128 --------LNYDFGVQKAHQAVH---VLGADGL-------FLH----------------L 153 D V A + G + +H Sbjct: 146 AAGCTALVFTVDMPVPGARYRDAHSGMSGPNAALRRYWQAAMHPRWAWDVGALGRPHDLG 205 Query: 154 NPLQEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + +P G ++ + + + P+L+K + L D + Sbjct: 206 NISAYLGKPTGLADYMGYLGANFDPSISWKDLEWIRAFWKGPMLIKGI---LDPEDAKDA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFI 262 ++ G ++ GG + + + +L +A + + Sbjct: 263 VRFGADGIIVSNHGGRQLDGV------------------LSSAHALPPIADAVKGRIKIL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+RNG+D++++I LGA + F+ A V +E L KE V+M L Sbjct: 305 ADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTLTSV 364 Query: 322 KRVQEL 327 +V ++ Sbjct: 365 AKVSDI 370 >gi|302680801|ref|XP_003030082.1| hypothetical protein SCHCODRAFT_235927 [Schizophyllum commune H4-8] gi|300103773|gb|EFI95179.1| hypothetical protein SCHCODRAFT_235927 [Schizophyllum commune H4-8] Length = 417 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 69/209 (33%), Gaps = 30/209 (14%) Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-----------LSSKIALLSSAMDVPLLL 188 A G L + ++ E Q D I + + D+P++L Sbjct: 215 AAKAAGCSALLITVDTTSEGWQARAWRAGGDEPTGNAQLHVLTWENIEWIKNNTDLPVVL 274 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + LS D L +G+ ++ GG + + +I Sbjct: 275 KGI---LSVEDAILARDAGLAGIYLSNHGGRQLDGAPAPVQVLMEINKY----------- 320 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 A +E A G + + LK + LGA + GL P V +++L Sbjct: 321 ---APGLVDEIPVFADGAIYSANHALKMLALGARMLGLGRPVQLSLTMGQAGVERMLQNL 377 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + +V M +G +L NT I Q Sbjct: 378 HDDMLVEMRQIGVSSPSQL--NTRYINTQ 404 >gi|190345236|gb|EDK37091.2| hypothetical protein PGUG_01189 [Meyerozyma guilliermondii ATCC 6260] Length = 453 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 95/295 (32%), Gaps = 41/295 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L +VD S EFLG K S P S+ Sbjct: 169 ADDEITLRENHYAFSRIFFNPKVL--TDVSDVDISTEFLGVKSSAPFYCSA-AAQARMGN 225 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------QRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E ++A + + S + V + N + F+L + N Sbjct: 226 EDGELSIARGCGNEGIIQMISSTASYSLGEIVEAARKNQPQWFQL-YVNEDRDISYN--T 282 Query: 126 VQLNYDFGVQKAHQAVHVL-----GADGLFLHLNPLQEIIQPNGN-----TNFADL---S 172 ++ G++ V D F + E+ + NF D+ Sbjct: 283 IKQCEKLGLKAIFVTVDTAMLRRREKDLKFRLFDDEDEVSSTESHADDPLMNFKDVRLTW 342 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I S +P+++K V D+ L + G+ ++ GG + ++ + Sbjct: 343 EDIDKFKSMTKLPIVIKGVQR---VQDVLLAIDHGVDAVVLSNHGGRQLDFSRAPVEVLA 399 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ + + + + GG+R G D+LK++ L G+ Sbjct: 400 DVMP------------VLKEKKLEEKIEVYIDGGIRRGTDVLKALCLRCKRRGIG 442 >gi|297170651|gb|ADI21676.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured Rhizobium sp. HF0130_09F11] Length = 414 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 110/362 (30%), Gaps = 76/362 (20%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 N+ F+D L+ R L ++ D S GK P IS M G + + Sbjct: 64 AFRANRSDFEDIRLVPRILAGLAVR--DQSRTLFGKTWKHPFGISPM-GLSALTAYDGDI 120 Query: 78 NLAIAAEKTKVAMAVGSQRVM---------------------------FSDHNAIKSFEL 110 L +A + + + + ++ D +++ Sbjct: 121 VLTRSAHECGIPAVLSATSLISLERVAKEGHARWFQAYLPGDDARVTGMVDRLTAANYDT 180 Query: 111 RQYAPHTVLISN--------LGAV-QLNYDFGVQKAHQAVHVLG--ADGLFLHLNPLQE- 158 + N GA + + D +Q + V+G A L H P E Sbjct: 181 LVITADVPVAGNREDSRRDRFGAPMKPSLDLALQGVVRPGWVMGTMARTLMNHGMPHFEN 240 Query: 159 --------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 II N +F A+ L++K V LS D + Sbjct: 241 ADVERGPAIISKNVVRSFGGRGTFSWRHAAIARERWRGKLVIKGV---LSPQDARRAREL 297 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + + + GG Sbjct: 298 GADGIIVSNHGGRQLDYAVSGIAALPAVK------------------AAAGDMAVMLDGG 339 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA-IESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK+I LGA + PFL A + DA V + L E M ++G + Sbjct: 340 VRRGSDVLKAIALGADFVFVGRPFLFAAAVAGDAGVKHAVSLLAAEIDRDMAMIGAPSLD 399 Query: 326 EL 327 + Sbjct: 400 AI 401 >gi|312381086|gb|EFR26909.1| hypothetical protein AND_06677 [Anopheles darlingi] Length = 894 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 111/364 (30%), Gaps = 69/364 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I N+ F+ + R L + ++ L P+ I+ + Sbjct: 186 AASERTIAHNRSAFERLRIRPRCLQRLGGSR-SLAITCLDIGYKLPIGIAPVALQRLAHP 244 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E + +A AA + + + + S + + A + + D Sbjct: 245 EG-EKAMARAARTFGIPFVL----------SVLSSVSIEELAEAVPRAPKWFQLYIFKDR 293 Query: 133 GVQKAH-QAVHVLGADGLFLHLN-PLQEIIQPNGNT-----------NF----------- 168 + + + L + ++ P + + NF Sbjct: 294 ELTECLVRRAEKARFRALVVTVDCPAPGLSRTERRNPLTLPPKVTCANFVPAGADGKKSC 353 Query: 169 -------------ADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 L I L S +P+++K + L D + G+ ++ Sbjct: 354 SASVLDYVRSQLDPGLGWDAIRWLMSITTLPVIVKGI---LHRNDALIAADIGVHGLIVS 410 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-----------EMARPYCNEAQFIA 263 GG + S G++ G+PT L L E+ + + + Sbjct: 411 NSGGRQIDCAPAAVS-NSVYGLLP---GVPTKLFLCKTHLQIEILPEIVHAVGHRLEVML 466 Query: 264 SGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+ G D+ K++ LGA L + P A++ V ++ L+ E +M G Sbjct: 467 DSGICEGTDVFKALALGARLVFVGRAPMYGLAVNGQRGVEEVLDILKMELESTMLNAGCA 526 Query: 323 RVQE 326 V + Sbjct: 527 TVAD 530 >gi|110668746|ref|YP_658557.1| isopentenyl-diphosphate delta-isomerase [Haloquadratum walsbyi DSM 16790] gi|109626493|emb|CAJ52954.1| isopentenyl-diphosphate delta-isomerase [Haloquadratum walsbyi DSM 16790] Length = 400 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 125/358 (34%), Gaps = 67/358 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +RNK F W +I R L + D S LG + S+PL+I+ + G ++ Sbjct: 62 AGTEETFERNKD-FSRWRIIPRMLRG--VADRDLSTTVLGNEHSYPLMITPL--GVQSLL 116 Query: 73 ERINR-NLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFELR 111 A A + V + S Q SD + SF R Sbjct: 117 HDDGEIATARACAEMDVPFVLSSLSSATMEDVAEALGDTPKWFQYYWASDRDVATSFLDR 176 Query: 112 -QYAPHTVLISNLGAVQLNY-DFGVQKAHQAVHVLGADGLFLHLN----------PLQEI 159 + A + ++ + A L + D ++K + L +G+ + + P +E Sbjct: 177 AETAGYDAIVVTVDAPTLGWRDRLLEKGYY--PFLEGEGIGNYFSDPAFRDSLARPPEED 234 Query: 160 IQPNGNT------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + + + +A + D+P+++K V L D +++G + Sbjct: 235 PEAAVDRFLSIFGDASLTWDDLAFVREQTDLPIIIKGV---LHPDDARRAVEAGADAVQV 291 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + + +I +E + G+R G Sbjct: 292 STHGGRQVDGSIAAIEALPEIAE-----------------AVGDETTVLFDSGIRRGAQA 334 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 K++ LGA L PF A + V +E+ + ++M L G V ++ + Sbjct: 335 FKALALGADTVLLGRPFAYGLAHSGQEGVEQVLENTLSQIDLTMGLAGIDDVDDIDRS 392 >gi|254459503|ref|ZP_05072919.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206676092|gb|EDZ40579.1| L-lactate dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 387 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA + ++LK + L + D ++ LK G ++ GG S + Sbjct: 235 WDKIAKIKEMWGGKVILKGI---LDAEDAKMALKVGADAIVVSNHGGRQLDGAMSSIKML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 S+ A + + GG+R+G D+LK++ +GA + F+ Sbjct: 292 ---------------QSILDA--VGDHIEVHMDGGIRSGQDVLKALAMGAKGTYIGRAFI 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V A+E + KE SM L G + V EL + ++ Sbjct: 335 YGLGAMGQAGVTKALEVIHKELDTSMALCGKRNVGELTNDALMV 378 >gi|124265553|ref|YP_001019557.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] gi|124258328|gb|ABM93322.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] Length = 370 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 107/363 (29%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R ++ + G+ + P++I+ TG G Sbjct: 13 EGTYRANETDFARILLRQRV--AVNMEGRSLRTTLAGQDCAMPVVIAP-TGLTGMQHADG 69 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTV---LI 120 I A AAE V + + + + A + F+L R + + Sbjct: 70 EILG--ARAAEAFGVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMERLIERAKA 127 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 + A+ L D V + + A+ + L + P + + Sbjct: 128 ARCSALVLTLDLQV-LGQRHKDLKNGMTAPPKPTLANLINLAMKPRWCLGMAGTRRHSFG 186 Query: 171 ---------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +A + L+LK + + D +L Sbjct: 187 NLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGI---MEVADAKLA 243 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I + + Sbjct: 244 ADSGADAIVVSNHGGRQLDGAPSSIAALPAIAE-----------------AVGDRIEVWM 286 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK++ LGA + FL V A+E +R E ++M G Sbjct: 287 DGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAMGQAGVTRALEIIRNELDITMAFTGHT 346 Query: 323 RVQ 325 ++ Sbjct: 347 DIR 349 >gi|305679971|ref|ZP_07402781.1| putative (S)-mandelate dehydrogenase [Corynebacterium matruchotii ATCC 14266] gi|305660591|gb|EFM50088.1| putative (S)-mandelate dehydrogenase [Corynebacterium matruchotii ATCC 14266] Length = 439 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 107/369 (28%), Gaps = 86/369 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++R ++ F D L VD S E G + P I+ TG M Sbjct: 80 ADDEISMNRARQAFKDVEFHPSIL--NDVSNVDTSCEVFGGPSALPFGIAP-TGFTRLMQ 136 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A AA K + + + + +++ PH L V + Sbjct: 137 TEGELAGASAAGKAGIPFCLSTLGTTSIE-------DVKAANPHGRNFFQL-YVMRQREI 188 Query: 133 GVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQ--PNGNTNFADLSS 173 +A G D LF ++ P Q + N Sbjct: 189 SYGLVKRAAEA-GFDTLFFTVDTPIAGARLRDKRNGFSIPPQISLGTVANAIPRPWWWVD 247 Query: 174 ----------------------------------KIALLSSAMDVPLLLKEVGCGLSSMD 199 + + S L++K V + D Sbjct: 248 FLTTPTLSFASLSSTGGTVGELLNSAMDPSIQFSDLEEIRSMWPGKLVVKGVQ---NVED 304 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ GG R W +P E+ R + Sbjct: 305 SKKLADLGVDGIILSNHGGRQLDRAPVP------------FWLLP-----EVVREVGKDL 347 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFL 318 G+ +G DI+ ++ +GA + +L M +A V AIE L ++ +M L Sbjct: 348 DVTMDTGIMHGADIVAAMAMGAKFTFIGRAYLYGLMAGGEAGVTRAIEILAEQVRRTMQL 407 Query: 319 LGTKRVQEL 327 L + + EL Sbjct: 408 LQVETIDEL 416 >gi|146423774|ref|XP_001487812.1| hypothetical protein PGUG_01189 [Meyerozyma guilliermondii ATCC 6260] Length = 453 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 95/295 (32%), Gaps = 41/295 (13%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F + L +VD S EFLG K S P S+ Sbjct: 169 ADDEITLRENHYAFSRIFFNPKVL--TDVSDVDISTEFLGVKSSAPFYCSA-AAQARMGN 225 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------QRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 E ++A + + S + V + N + F+L + N Sbjct: 226 EDGELSIARGCGNEGIIQMISSTASYSLGEIVEAARKNQPQWFQL-YVNEDRDISYN--T 282 Query: 126 VQLNYDFGVQKAHQAVHVL-----GADGLFLHLNPLQEIIQPNGN-----TNFADL---S 172 ++ G++ V D F + E+ + NF D+ Sbjct: 283 IKQCEKLGLKAIFVTVDTAMLRRREKDLKFRLFDDEDEVSSTESHADDPLMNFKDVRLTW 342 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I S +P+++K V D+ L + G+ ++ GG + ++ + Sbjct: 343 EDIDKFKSMTKLPIVIKGVQR---VQDVLLAIDHGVDAVVLSNHGGRQLDFSRAPVEVLA 399 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ + + + + GG+R G D+LK++ L G+ Sbjct: 400 DVMP------------VLKEKKLEEKIEVYIDGGIRRGTDVLKALCLRCKRRGIG 442 >gi|294668750|ref|ZP_06733843.1| L-lactate dehydrogenase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309267|gb|EFE50510.1| L-lactate dehydrogenase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 395 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 116/365 (31%), Gaps = 73/365 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N F + L + + + + +G+ + PL I+ TG Sbjct: 42 QTTYRANTADFIPIQFRQKVL--VDMEGRSLAAKMIGQDVKMPLAIAP-TGFTGMAWADG 98 Query: 76 NRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTV---LISN 122 + A AAEK V ++ + + + + +A F+L R++ + + + Sbjct: 99 EIHAARAAEKFGVPFSLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAQAAK 158 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQ-----EIIQPNGN---TNFADL- 171 A+ L D V Q+ + L A LN + E + F ++ Sbjct: 159 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLLNCINLAMKWEWCWNMLHTERRTFRNIV 218 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L++K + + D EL +K Sbjct: 219 GHAKNVGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MEPEDAELAVKH 275 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S DI + + + G Sbjct: 276 GADAIVVSNHGGRQLDGAPSSIHALPDI-----------------VQAVGSRTEVWLDSG 318 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK+ +GA FL D V A+E + E ++M G + + Sbjct: 319 IRSGQDMLKAWAMGARGFMTGRAFLYGLGAYGEDGVRRALEIMYNEMDITMAFTGHRNLH 378 Query: 326 ELYLN 330 ++ N Sbjct: 379 DVDKN 383 >gi|158634556|gb|ABW76128.1| lactate oxidase [Streptococcus iniae] gi|158634566|gb|ABW76133.1| lactate oxidase [Streptococcus iniae] Length = 407 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 105/372 (28%), Gaps = 82/372 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + + F G KL+ P++++ + Sbjct: 52 AGDTFTLHENIRSFNHKLIVPHGLKG--VENPSTEITFDGDKLASPIILAPVA------A 103 Query: 73 ERINRNLAIAAEKTKVA----MAVGSQRVMFSDHNAIKS-------FELRQYAPHTV--- 118 ++ A V + S ++ F+ + Sbjct: 104 HKLANEQGEIASAKGVKEFGTIYTTSSYSTTDLPEISQTLGDSPHWFQFYYSKDDGINRH 163 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ L A + L D V ++ V + + +QE + PNG D Sbjct: 164 IMDRLKAEGVKSIVLTVDATV-GGNREVDKRNGFVFPVGMPIVQEYL-PNGAGKTMDYVY 221 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K + ++ +P+ +K C D L++G + GG Sbjct: 222 KATKQALSPKDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDG 278 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ + G+R G + K++ GA L Sbjct: 279 GPAAFDSLQEVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADL 321 Query: 284 GGLASPFLKPAMDSSD------------------AVVAAIESLRKEFIVSMFLLGTKRVQ 325 L P + +D E + E + M L GT+ + Sbjct: 322 VALGRPVIYGLASGADLVALGRPVIYGLAMGGSVGTRQVFEKINDELKMVMQLAGTQTID 381 Query: 326 E-----LYLNTA 332 + L N Sbjct: 382 DVKHFKLRHNPY 393 >gi|226506390|ref|NP_001146005.1| glycolate oxidase1 [Zea mays] gi|219885291|gb|ACL53020.1| unknown [Zea mays] Length = 309 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 60/321 (18%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 + LG K+S P++++ KM N A + S S Sbjct: 2 TTTVLGFKISMPIMVAPTA--MQKMAHPDGENATARAAAAAGTIMTLSSWATSSVEEVAS 59 Query: 107 S-----------FELRQYAPHTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 + ++ R+ V + A+ L D + + + L H Sbjct: 60 TGPGIRFFQLYVYKDRKVVEQLVRRAERAGFKAIALTVDTP-RLGRREADIKNRFVLPPH 118 Query: 153 L------------------NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 L + L + + + + L + +P+L+K V Sbjct: 119 LTLKNFEGLDLGKMDQAADSGLASYVAGQVDRTLSW--KDVKWLQTITTLPILVKGV--- 173 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-AR 253 L++ D L + +G ++ G + + T +LE + Sbjct: 174 LTAEDTRLAVANGAAGIIVSNHGARQLDYVPA------------------TISALEEVVK 215 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEF 312 + GG+R G D+ K++ LGA+ + P + A V + LR EF Sbjct: 216 AARGQLPVFVDGGVRRGTDVFKALALGAAGVFVGRPVVFSLAAAGEAGVSNVLRMLRDEF 275 Query: 313 IVSMFLLGTKRVQELYLNTAL 333 ++M L G + E+ + Sbjct: 276 ELTMALSGCTSLAEITRKHII 296 >gi|328912111|gb|AEB63707.1| hypothetical protein LL3_02170 [Bacillus amyloliquefaciens LL3] Length = 384 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 135/371 (36%), Gaps = 82/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F +W++ R L ++S + +V G+ P L++ + G ++ Sbjct: 46 AGSEDTMRSNREAFFEWNIRPRKLRDVSKRNI--TVSLFGQTFPAPFLLAPI--GVQEIA 101 Query: 73 E-RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA +T + + + + + P + + Sbjct: 102 HPHGDLASAKAAAETGIPFILSTHSSY----SIEDVAAVMGKCPRWFQLYWPKDRDIMIS 157 Query: 132 FGVQKAHQAVHVLGADGLFLHLN-PLQEIIQ----------------------------- 161 F V++A QA G + + L+ P Q + Sbjct: 158 F-VRRAEQA----GYSAIVVTLDLPEQGWRERDIRNGYHPSKKGLGIANFLTDPVFRSRL 212 Query: 162 ---PNGNTN---------FAD---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 P + N F + +A L + ++P+LLK + L D EL ++ Sbjct: 213 KLPPEKDMNTAIAFFIDIFHEPSLTWDDLACLRTHTNLPILLKGI---LDPRDAELAVQY 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L +I + +P +++ N + G Sbjct: 270 GADGIIVSNHGG---------RQLNGEIASLKA---LP-----KISETVQNRIPVLLDSG 312 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++K++ LGAS L ++ A+ S V I ++ +SM G K + Sbjct: 313 IRGGSDVIKALALGASAVFLGRTYVYGLAVAGSSGVRRVISHFIRDIDISMTNAGIKSIS 372 Query: 326 ELYLNTALIRH 336 ++ + +L++H Sbjct: 373 DI--DRSLLQH 381 >gi|169609020|ref|XP_001797929.1| hypothetical protein SNOG_07595 [Phaeosphaeria nodorum SN15] gi|160701766|gb|EAT85061.2| hypothetical protein SNOG_07595 [Phaeosphaeria nodorum SN15] Length = 442 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 ++ D + + L D P++LK + + D + G+ ++ GG S Sbjct: 285 HYRDW-NDLQTLRKYWDGPIVLKGIQ---TVEDAHRAIDHGMDGIIVSNHGGRQLDGAIS 340 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D ++IG R + + G+R G D+LK++ LGA + Sbjct: 341 SIDALAEIG--------------ADERVKDSNLTLLFDSGIRTGSDVLKALALGAKAVLV 386 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P++ AM + V + + + S+ LG K + E+ N + + Sbjct: 387 GRPYVYGLAMGGEEGVKHVLNCMLADTDSSLANLGKKSIAEISRNDLRVLQE 438 >gi|21909833|ref|NP_664101.1| L-lactate oxidase [Streptococcus pyogenes MGAS315] gi|21904019|gb|AAM78904.1| putative lactate oxidase [Streptococcus pyogenes MGAS315] Length = 393 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 55 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDYLTSPLILAPVA------A 106 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 107 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 166 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 167 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 224 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 225 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 281 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ ++ + G+R G I K++ GA L Sbjct: 282 GPAAFDSLQEVAE-----------------AVDHKVPIVFDSGIRWGQHIFKALASGADL 324 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 325 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 379 >gi|308173957|ref|YP_003920662.1| hypothetical protein BAMF_2066 [Bacillus amyloliquefaciens DSM 7] gi|307606821|emb|CBI43192.1| hypothetical protein BAMF_2066 [Bacillus amyloliquefaciens DSM 7] gi|328553116|gb|AEB23608.1| hypothetical protein BAMTA208_07170 [Bacillus amyloliquefaciens TA208] Length = 384 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 135/371 (36%), Gaps = 82/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F +W++ R L ++S + +V G+ P L++ + G ++ Sbjct: 46 AGSEDTMRSNREAFFEWNIRPRKLRDVSKRNI--TVSLFGQTFPAPFLLAPI--GVQEIA 101 Query: 73 E-RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + A AA +T + + + + + P + + Sbjct: 102 HPHGDLASAKAAAETGIPFILSTHSSY----SIEDVAAVMGKCPRWFQLYWPKDRDIMIS 157 Query: 132 FGVQKAHQAVHVLGADGLFLHLN-PLQEIIQ----------------------------- 161 F V++A QA G + + L+ P Q + Sbjct: 158 F-VRRAEQA----GYSAIVVTLDLPEQGWRERDIRNGYHPSKKGLGIANFLTDPVFRSRL 212 Query: 162 ---PNGNTN---------FAD---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 P + N F + +A L + ++P+LLK + L D EL ++ Sbjct: 213 KLPPEKDMNTAIAFFIDIFHEPSLTWDDLACLRTHTNLPILLKGI---LDPRDAELAVQY 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L +I + +P +++ N + G Sbjct: 270 GADGIIVSNHGG---------RQLNGEIASLKA---LP-----KISETVQNRIPVLLDSG 312 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++K++ LGAS L ++ A+ S V I ++ +SM G K + Sbjct: 313 IRGGSDVIKALALGASAVFLGRTYVYGLAVAGSSGVRRVISHFIRDIDISMTNAGIKSIS 372 Query: 326 ELYLNTALIRH 336 ++ + +L++H Sbjct: 373 DI--DRSLLQH 381 >gi|256157424|ref|ZP_05455342.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] gi|256253598|ref|ZP_05459134.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|261220734|ref|ZP_05935015.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|265995913|ref|ZP_06108470.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] gi|260919318|gb|EEX85971.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti B1/94] gi|262550210|gb|EEZ06371.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Brucella ceti M490/95/1] Length = 381 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + L+LK + L D ++ KSG I+ GG S + Sbjct: 235 WSDVEWIKEQWGGKLILKGI---LDVEDAKMAAKSGADAIIISNHGGRQLDGAPSSISML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK+ LGA + PFL Sbjct: 292 QPI-----------------VEAVGDRIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFL 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + V A+E +RKE ++M L G + + E+ + Sbjct: 335 YGLGAMGKEGVTLALEIIRKEMDITMALCGKRDINEIDKS 374 >gi|255084986|ref|XP_002504924.1| glycolate oxidase [Micromonas sp. RCC299] gi|226520193|gb|ACO66182.1| glycolate oxidase [Micromonas sp. RCC299] Length = 374 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 27/166 (16%) Query: 165 NTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +F+ L + P+ LK V + D + G ++ GG Sbjct: 199 DPSFSW--DDAEWLCQEWNEGPVALKGV---VRPSDALKAVDRGFDAVWVSNHGGRQLET 253 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D+ S+ A + GG++ G D+LK + +GA Sbjct: 254 APAPIDVLP---------------SIRDAM-----GGIVVDGGVQRGTDVLKGLAMGADA 293 Query: 284 GGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELY 328 + P+L +A V A + L E +M LLG V+EL Sbjct: 294 VAIGKPYLYGLCAGGEAGVRKAFDVLTDELERAMGLLGVGTVRELR 339 >gi|28896472|ref|NP_802822.1| L-lactate oxidase [Streptococcus pyogenes SSI-1] gi|28811723|dbj|BAC64655.1| putative lactate oxidase [Streptococcus pyogenes SSI-1] Length = 395 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 65/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ +L + + F G L+ PL+++ + Sbjct: 57 AGDTFTLHENIRSFNHKLIVPHSLKG--VENPSTEITFDGDYLTSPLILAPVA------A 108 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHN-------AIKSFELRQYAPHTV--- 118 ++ A + ++ S F+ + Sbjct: 109 HKLANEQGEVASAKGLKEFGSIYTTSSYSTTDLPEISAALGGTPHWFQFYYSKDDGINRN 168 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + +QE + P+G D Sbjct: 169 IMDRVKAQGCKAIVLTADATV-GGNREVDRRNGFVFPVGMPIVQEYL-PDGAGKTMDYVY 226 Query: 174 K----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K I +++ +P+ +K C D L +G + GG Sbjct: 227 KSAKQALTSKDIEYIATYSGLPVYVKGPQCA---EDTLRALDAGASGIWVTNHGGRQLDG 283 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D ++ ++ + G+R G I K++ GA L Sbjct: 284 GPAAFDSLQEVAE-----------------AVDHKVPIVFDSGIRWGQHIFKALASGADL 326 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 L P + AM S E L E + M L GT+ +Q+ L N Sbjct: 327 VALGRPAIYGLAMGGSIGTRQVFEKLNDELKMVMQLAGTQTIQDVKAFNLRHNPY 381 >gi|16262669|ref|NP_435462.1| FMN-dependent dehydrogenase [Sinorhizobium meliloti 1021] gi|14523290|gb|AAK64874.1| FMN-dependent dehydrogenase [Sinorhizobium meliloti 1021] Length = 381 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 111/362 (30%), Gaps = 69/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + N+ F L L E D + +LGK+ P ++ + G + Sbjct: 31 EEETMRANRSDFSRLTLRQNVLVEPQPQ--DLATAYLGKRHPLPFMLGPV-GFLGLYSGK 87 Query: 75 INRNLAIAAEKTKVAMAVGSQRV-------------------MFSDHNAIKSF--ELRQY 113 AA + + + + + D + + F Sbjct: 88 GEVKAVRAAHAAGIPFCLSTFSIASLADLRIVTDGPLHFQLYVLEDRSLCEEFLRAAEYA 147 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF-LHLNP--LQEII---QP----- 162 T+ ++ A+ + V+ +++ + D L L P L E++ P Sbjct: 148 GVDTLFVTVDTAITGIRERDVRNGFRSLTRVTPDLFARLALKPRWLAEVVLAGMPSVRAV 207 Query: 163 NGNTNF-ADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGI 208 F + A LS +D L K++ L+ D G Sbjct: 208 EHRPEFGRGALEQAANLSRRIDKTLSWKDIAWLRERWAGKLVIKGVLTPADAVRARDLGC 267 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGL 267 ++ GG T +L R + + GG+ Sbjct: 268 DGVVVSNHGGRQLDGAP------------------STIRALPSIRATVGTDFCLMLDGGI 309 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D++K+I LGA L + V I L +E +S+ L+G V++ Sbjct: 310 RRGADVIKAIALGADGVMLGRAYAYGLSAAGQAGVAEVIAILEREISISLALMGIASVEQ 369 Query: 327 LY 328 L Sbjct: 370 LK 371 >gi|330924496|ref|XP_003300663.1| hypothetical protein PTT_11971 [Pyrenophora teres f. teres 0-1] gi|311325083|gb|EFQ91232.1| hypothetical protein PTT_11971 [Pyrenophora teres f. teres 0-1] Length = 449 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 19/172 (11%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N+ D + + +L D P++LK + + D + + G+ ++ GG + Sbjct: 292 NYRDW-NDLKVLRKYWDGPIVLKGIQ---TVEDAQRAVDYGMDGIVVSNHGGRQLDGAIA 347 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D ++IG R + + G+R G D+LK++ LGA + Sbjct: 348 SLDALAEIG--------------ADDRIKSSGLTILFDSGIRTGSDVLKALALGAKAVLV 393 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P++ AM + V + + + S+ LG K V E+ + Q Sbjct: 394 GRPYVYGLAMGGEEGVKHVLNCMLADTDNSLANLGKKNVGEISREDLRVMQQ 445 >gi|300023345|ref|YP_003755956.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hyphomicrobium denitrificans ATCC 51888] gi|299525166|gb|ADJ23635.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Hyphomicrobium denitrificans ATCC 51888] Length = 382 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 21/163 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L++K + L D +K+G ++ GG S + Sbjct: 237 WDDVAWIRERWPGKLIVKGI---LDVEDAREAVKAGADAIVVSNHGGRQLDGAASSISIL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I +E + + GG+R+G D+ +++ LGA L +L Sbjct: 294 PRIAD-----------------AVGSETEILFDGGIRSGQDVFRALALGARGCLLGRAYL 336 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V AIE + KE V+M L G + + ++ + + Sbjct: 337 YGVCAAGEEGVTKAIEIIAKELDVTMALAGLRTIADIGKTSLV 379 >gi|160900726|ref|YP_001566308.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160366310|gb|ABX37923.1| L-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] Length = 391 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 109/363 (30%), Gaps = 78/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 N+ F L R ++ + +G++++ P+ I+ TG G Sbjct: 37 QGTYRANEDDFQKIKLRQRV--AVNMEGRSTRTTMIGQQVAMPVAIAP-TGLTGMQHADG 93 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV----MFSDHNAIKSF-------ELRQYAPHTV---L 119 I A AA+ + + + + +DH A F R++ + Sbjct: 94 EILG--ARAAQAFGIPFTLSTMSICSIEDIADHTARHPFWFQLYVMRDRRFMERLIERAR 151 Query: 120 ISNLGAVQLNYDF--------GVQKAHQAVHVLGADGLF-LHLNPLQEIIQPNG-NTNFA 169 +N A+ L D ++ L L P + F Sbjct: 152 AANCSALVLTLDLQILGQRHKDIKNGLSTPPKPTLRNLANLATKPHWCLGMLGTKRRTFG 211 Query: 170 DLSSKI--------------------------ALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + L+LK + + + D L Sbjct: 212 NIVGHVDGVADMSSLSSWTASQFDPSLNWGDVERIKKLWGGKLILKGI---MDAEDARLA 268 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S + GI A + + Sbjct: 269 ADSGADALIVSNHGGRQLDGAPSSIEALP---------GI--------AEAAGKDIEVWM 311 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + FL D V A++ ++KE +M G Sbjct: 312 DGGIRSGQDVLKARALGAQGTMIGRSFLYGLGAYGQDGVTRALQIIQKELETTMAFCGHT 371 Query: 323 RVQ 325 ++ Sbjct: 372 QID 374 >gi|254820362|ref|ZP_05225363.1| lactate 2-monooxygenase [Mycobacterium intracellulare ATCC 13950] Length = 386 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 117/367 (31%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N++ FD W LI R + + D SV+ G L P+ ++ + G G Sbjct: 49 AGDERTQRANREAFDRWGLIPRMF--VGAADRDLSVQMFGLTLPSPVFMAPI-GVIGICA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V M V + + A + T L + Sbjct: 106 QDGHGDLATARAAARTGVPMVVSTLTADPMEDVAAQ-------FGDTPGFFQLYTP-KDR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQE----IIQPNGNTNFADL 171 D +A G G+ + L N Q + + F Sbjct: 158 DLAASLVRRA-EAAGFQGIIVTLDTWIPGWRPRDLSTANFPQLRGLCLSNYTSDPIFRAG 216 Query: 172 SSK-------------------------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + L S D+PL++K + D Sbjct: 217 LQRPPEEDPQGTVLQWITTFGNPLTWDDLEWLRSLTDLPLIIKGICH---PDDARRAKDG 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + G Sbjct: 274 GVDGIYCSTHGGRQ------------------ANGGLPALDCLPGVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D++K++ LGA+ G+ P+ A+ D +V + S+ E + M + G ++ Sbjct: 316 VRSGADVVKALALGATAVGIGRPYAYGLALGGDDGIVHVLRSILAETDLIMAVDGYPTLK 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLSPDTL 382 >gi|293553134|ref|ZP_06673772.1| lactate oxidase [Enterococcus faecium E1039] gi|291602725|gb|EFF32939.1| lactate oxidase [Enterococcus faecium E1039] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHVLRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVRQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|186685764|ref|YP_001868960.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nostoc punctiforme PCC 73102] gi|186468216|gb|ACC84017.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Nostoc punctiforme PCC 73102] Length = 373 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 124/354 (35%), Gaps = 61/354 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F+ L R L + + + + LG+ L PLLI+ M + + Sbjct: 38 AWDEITLRDNRAAFERVKLRPRIL--VDVSDRNLTTSILGQPLQLPLLIAPMA---FQCL 92 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMF---------SDHNAIKSFELRQYAPHTVLIS 121 + + A+AA V M + + +++ F+L + + + Sbjct: 93 AHPDGEVATALAAASAGVGMVLSTMATKSIEEVATACDKFPESLRWFQLYIHKDKGLTRA 152 Query: 122 NL--------GAVQLNYDFGVQKAHQAVHVLG-ADGLFLH---------LNPLQEIIQPN 163 + A+ L D V + A LH L+ E + Sbjct: 153 LVEKAYKAGYKALCLTVDAPVLGQRERDRRNEFALPTDLHLANLATISGLDISHEKGESG 212 Query: 164 GNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 T FA + L S +PL++K V G D ++ G + ++ G Sbjct: 213 LFTYFAQQLNPAVTWDDLEWLQSLSPLPLVIKGVLRG---DDAVRAVEYGAKAIVVSNHG 269 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D +E+ + + + GG+R G DILK++ Sbjct: 270 GRQLDGAIASLDAL-----------------VEIVAAVDGKIEVLLDGGIRRGTDILKAL 312 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 LGA + P L A+ V I L+ E V M L G ++Q++ L+ Sbjct: 313 ALGAKAVLIGRPILWGLAVAGQVGVSHVISLLQGELNVGMALSGCAKLQDINLS 366 >gi|156351424|ref|XP_001622505.1| predicted protein [Nematostella vectensis] gi|156209061|gb|EDO30405.1| predicted protein [Nematostella vectensis] Length = 272 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 88/245 (35%), Gaps = 41/245 (16%) Query: 97 VMFSDHNAIKSFELRQYA---PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 V K++ + + P + I NLG + + +G + Sbjct: 61 VTVDSPEGPKNYSIERNKFTLPSNLTIPNLG-----------HKKYVLKSVDGNGNTKFV 109 Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + E+ D K++ L P++LK + L+ D L ++ GI + Sbjct: 110 SAGNELFDGGVTWKSIDWLKKLSRL------PIVLKGI---LTPEDARLAVEHGIDGIIV 160 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG +++ D DI + + + GG+R G D+ Sbjct: 161 SNHGGRQLDGVQATIDALPDI-----------------VKAVQGKLEVYMDGGVRLGTDV 203 Query: 274 LKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K++ LGA + P A + V +E LR+E ++M L G + ++ + Sbjct: 204 FKALALGARAVFVGRPVIWGLAYKGEEGVRQVLELLREELRLAMILSGCGSLDDVTSSYV 263 Query: 333 LIRHQ 337 + +Q Sbjct: 264 IPANQ 268 >gi|159043500|ref|YP_001532294.1| L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157911260|gb|ABV92693.1| L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 390 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 113/371 (30%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD L R + D +G++++ P+ ++ + TG Sbjct: 33 EQTFRENSSDFDLLKLRQRI--AMDMDNRSTKTTMVGQEVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLI----- 120 I A AAEK V + + + + L+ L Sbjct: 90 EI--KAARAAEKFGVPFTLSTMSICSIEDVAAHTETPFWFQVYTLKDDDFMKRLFDRAKE 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFAD- 170 + A+ + D ++ A L + + +Q + F Sbjct: 148 AKCSALVITVDLQLLGQRHRDLKNGLSAPPKLTPASIANMMTKVQWGLGMLGTKRRFFGN 207 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 +I S D P++LK + L D ++ L Sbjct: 208 IVGHAKGVTDPSSLSSWTAEAFDQSLDWERIKQFRSWWDGPVILKGI---LDPEDAKMAL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G + GG S + I ++ + Sbjct: 265 NVGADAIVCSNHGGRQLDGALSSIRMLPQIMD-----------------AVGDKIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + + +A V A+E + KE +SM L G + Sbjct: 308 SGIRSGQDVLKAVALGARGTMIGRAWTYGLGAMGEAGVTRALEVIHKELDLSMGLCGRRS 367 Query: 324 VQELYLNTALI 334 V++L + LI Sbjct: 368 VEDLDASNLLI 378 >gi|119896900|ref|YP_932113.1| (S)-2-hydroxy-acid oxidase [Azoarcus sp. BH72] gi|119669313|emb|CAL93226.1| probable (S)-2-hydroxy-acid oxidase [Azoarcus sp. BH72] Length = 373 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 80/257 (31%), Gaps = 48/257 (18%) Query: 75 INRNLAIAAEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 ++R L AE+ + + + + F+L P V +NL Sbjct: 151 VSRALVERAERAGYSGIVFTIDAPLNGVRNREHRAGFQL----PPGVDSANLRGAPAPVR 206 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + + AV Q + + LS +P++LK V Sbjct: 207 PALGEHDSAV--------------FQGL-----MREAPTWRD-VEWLSGITRLPVILKGV 246 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 L D + G ++ GG + + ++ + Sbjct: 247 ---LHPEDARIAADLGAAGLIVSNHGGRTLDTLPPALEMLPAMAD--------------- 288 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 + + GG+R G D+ K+I LGA + ++ A V I LR Sbjct: 289 --AVGDRVALLLDGGIRRGSDVFKAIALGARAVLVGRGYIHALAAAGPLGVAHVIRLLRD 346 Query: 311 EFIVSMFLLGTKRVQEL 327 E V+M L G + ++ Sbjct: 347 ELEVAMALAGCATLADI 363 >gi|302383940|ref|YP_003819763.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] gi|302194568|gb|ADL02140.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] Length = 394 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 124/375 (33%), Gaps = 74/375 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + RN F D+ ++ L + + G+ ++PL++S+ TG Sbjct: 33 ADEEWSLGRNVTAFSDYEIVPDVL--TDVSSIRTATTVFGQPAAWPLMLSA-TGLTRMFH 89 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIKSF--ELR 111 +A AA + + + Q +F D + F R Sbjct: 90 GAAEPAVARAAAAQGLPYCLSTMGTTRLEDLAATVPVPMLFQVYVFKDRGLTREFVSRCR 149 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL---FLHLNPLQEIIQPNGNT-N 167 + + ++ V N + L A L LH P I G+ + Sbjct: 150 EAGYAGLCLTVDTPVAGNRLRDRRSGLSLPPRLTARSLLDFALH--PGWSIPALTGDRFD 207 Query: 168 FADLSSKIALLS-----------SAMDVPLLLKEVGC-------------GLSSMDIELG 203 A++S + L+ D L ++V ++ D Sbjct: 208 LANVSHRTDALATNPMSLFDFIGRQFDPGLTWRDVEWLASEWNGPLAIKGLMTPEDATRA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + SG ++ GG + D ++ A + I Sbjct: 268 IGSGASGVILSNHGGRQLDGAPAPIDQ---------------VAAVRDALGDGPD--VIC 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DI+K++ LGA+ + P+L A V A+ LR EF ++ L G Sbjct: 311 DGGVRRGSDIVKAVALGATACSIGRPYLYGLAAAGEAGVARALAILRDEFERTLALAGVP 370 Query: 323 RVQELYLNTALIRHQ 337 +Q L + IRH+ Sbjct: 371 AIQSL--SRRHIRHR 383 >gi|27382520|ref|NP_774049.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] gi|27355692|dbj|BAC52674.1| L-lactate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 120/365 (32%), Gaps = 77/365 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + + N++ R L + + D S LG+ + PL+++ + G G Sbjct: 32 AEETLRANREDMQAIKFRQRIL--VDVSKRDTSTTILGETSTMPLVLAPV-GLLGMQHGD 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL---- 123 I+ AA+ + + + + A F+L + + + Sbjct: 89 GEIHA--CRAAQAAGIPFTQSTMSICSIEDIAASVEKPFWFQLYVMKDRGFIKALIERAI 146 Query: 124 ----GAVQLNYDFGV---------------------QKAHQAVHVLGADG---------- 148 A+ L D V + A G Sbjct: 147 AAKCSALVLTVDLQVIGQRHQDIKNGMTVPPEWSLSKLIDFATKPAWVSGVLQGKRRTFG 206 Query: 149 -LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L HL +I N + + + I + S L+LK + L D EL Sbjct: 207 NLAGHLKVSDDITSLSTWINSQFDTSLNWNDIDWIRSIWPGKLVLKGI---LDVEDAELA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + ++ GG S ++ +I + + + Sbjct: 264 AKTGAQAIVVSNHGGRQLDGAPSSIEVLPEI-----------------VDAVGDRMEIMF 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+++++ LGA + + A V AI+ ++KE + +M L G Sbjct: 307 DGGIRSGQDVMRALALGAKSCMIGRAYAYGLGAGGQAGVAKAIDIIQKELLTTMGLCGVN 366 Query: 323 RVQEL 327 R++E+ Sbjct: 367 RIEEI 371 >gi|134094917|ref|YP_001099992.1| L-lactate dehydrogenase [Herminiimonas arsenicoxydans] gi|133738820|emb|CAL61867.1| L-lactate dehydrogenase [Herminiimonas arsenicoxydans] Length = 381 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 112/359 (31%), Gaps = 71/359 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N + F R ++ + +G+++ P+ I+ TG G Sbjct: 33 ESTYRANSEDFARMKFRQRV--AVNMENRTLKTTMVGQEVHMPVAIAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVL--------I 120 I A AAEK + + + + + A + F+L + Sbjct: 90 EILA--ARAAEKFGIPFTLSTMSICSIEDIAAHTSKPFWFQLYVMKDRPFIERLIERAKA 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGNT----- 166 + A+ L D ++ A L + L + P + Sbjct: 148 AKCSALVLTLDLQILGQRHKDLKNGLSAPPKLTIPNILNMMGKPRWCMGMLGTRRRSFGN 207 Query: 167 ------NFADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKSG 207 + +D+SS A S D+ L K+V + + D L + SG Sbjct: 208 IVGHASDVSDMSSLSAWTSQQFDLALSWKDVEWIKKCWGGKLIIKGIMDAEDARLAVASG 267 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S I ++ + GG+ Sbjct: 268 ADAIIVSNHGGRQLDGALSSIAALPSI-----------------VEAVGDQIEVHMDGGI 310 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R+G D++K++ LGA + FL + V +E + +E ++M G V+ Sbjct: 311 RSGQDVIKALALGAKGTYIGRSFLYGLGAMGEEGVSKCLEIIERELDLTMAFCGLTDVK 369 >gi|186473946|ref|YP_001861288.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gi|184196278|gb|ACC74242.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 415 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 122/376 (32%), Gaps = 76/376 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ FD+ + R L ++ + + S G++ + P +I TG + M Sbjct: 44 AEDEATLRRNRDVFDEIAFLPRTL--VNVEHRNQSRTLFGQRTASPFMIGP-TGYSGLMF 100 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHT---VL 119 + LA AA + + + + + ++ + R++ L Sbjct: 101 REGDVQLASAAAAAGIPFVLSNASTVALEEVVQRAGGRVWMQVYMYRTREFVAKLAQRSL 160 Query: 120 ISNLGAVQLNYDFGVQKAHQ----------AVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + + A+ + D V + + + H + ++ P+G +FA Sbjct: 161 AAGIEALVVTTDSAVFGKREWDLRNYIKPLMLDWRNKFDVLGHPRWMSNVLWPSGMPHFA 220 Query: 170 DL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +L I L L++K V L + D Sbjct: 221 NLGDLLPSGQTSVKGATITLGQQLDPSLSWDDILWLRDLWPKRLVVKGV---LGAPDAVR 277 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +++G+ ++ GG S D+ ++ + Sbjct: 278 AIEAGVDGIVLSNHGGRQLDGAVSAMDVLPEV-----------------VDQVRGRLAVM 320 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGT 321 GG R G DILK++ LGA L AI+ L+ E + LLG Sbjct: 321 LDGGFRRGSDILKAVALGADAVLLGRATTYGLSAGGRPGAARAIQILQTEVDRGLGLLGC 380 Query: 322 KRVQELYLNTALIRHQ 337 + L + + +R Q Sbjct: 381 SDIAAL--DRSYLRWQ 394 >gi|222086703|ref|YP_002545237.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] gi|221724151|gb|ACM27307.1| L-lactate dehydrogenase (cytochrome) protein [Agrobacterium radiobacter K84] Length = 379 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 118/359 (32%), Gaps = 71/359 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + + N+ F L R L + +G+K+S P+ ++ MTG + E Sbjct: 33 ESTYEANEADFRKIKLRQRVL--VDMTNRTLESTMIGQKVSMPVALAPTGMTGMQHADGE 90 Query: 74 RINRNLAI------------AAEKTKVAMAVGS----QRVMFSDHNAIKSFELRQYAPHT 117 + A VA A Q + D + + S R A Sbjct: 91 MLAARAAEEFGIPFTLSTMSICSIEDVASATTKPFWFQLYVMQDRDFVMSLIDRAKAAKC 150 Query: 118 ----------VLISNLGAVQLNYDFGVQKAHQAV-----------HVLGAD-----GLFL 151 +L V+ + A + V +L + Sbjct: 151 SALVLTADLQILGQRHNDVRNGLSAPPKFAPKHVWQVATRPSWCWQMLQTKRHSFGNIIG 210 Query: 152 H---LNPLQEII-QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H +N ++ + G + S +A + PL++K + L D + + +G Sbjct: 211 HAKGVNDVKSLSNWTTGQFDQRLSWSDVAWIKEYWGGPLIIKGI---LDVEDAKAAVDTG 267 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 I+ GG S + GI ++ + GG+ Sbjct: 268 ADAIIISNHGGRQLDGAPSSISVLP---------GI--------VDAVGDKIEVHIDGGI 310 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R+G D+L+++ LGA + PFL D V A+E +RKE +SM G + ++ Sbjct: 311 RSGQDVLRAVALGAKGTYIGRPFLYGLGAMGKDGVTLALEIIRKEMDLSMAFCGKRDIK 369 >gi|254373678|ref|ZP_04989162.1| hypothetical protein FTDG_01686 [Francisella novicida GA99-3548] gi|151571400|gb|EDN37054.1| hypothetical protein FTDG_01686 [Francisella novicida GA99-3548] Length = 385 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 15 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 73 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 189 INLSTKVPWCLNMLKTSNRTFGNIVNHAANEGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + P+++K + + + D + G ++ GG S + +I Sbjct: 249 WNGPMIIKGI---MDTQDAIMAKNIGADAIIVSNHGGRQLDGAPSSISVLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA+ G + P + Sbjct: 299 ----------IDAVDRKLEVLIDSGIRSGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFYQEMDKTMAFCGHTNIN 373 >gi|224824749|ref|ZP_03697856.1| L-lactate dehydrogenase (cytochrome) [Lutiella nitroferrum 2002] gi|224603242|gb|EEG09418.1| L-lactate dehydrogenase (cytochrome) [Lutiella nitroferrum 2002] Length = 406 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 69/379 (18%), Positives = 116/379 (30%), Gaps = 98/379 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F D+ R L + + + SVE G++ + P I+ M G + Sbjct: 55 AEDNASLADNRAAFGDYGFQTRVL--VDVSQRNQSVELFGRRYAAPFGIAPM-GISALSA 111 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 R + LA AA+ + + S + I E+ + AP T + L D Sbjct: 112 YRGDIVLARAAQAANIP-------AILSGTSLIPLEEVIEQAPGTWFQAYLPGDPARIDA 164 Query: 133 GVQKAHQAVHVLGADGLFLHLN-------------------------PLQEIIQPN---- 163 VQ+ +A G + L L ++ Q + P Sbjct: 165 LVQRVARA----GVETLVLTVDIPVSANRENNVRTGFSTPLRPSLALAYQGLTHPRWLLG 220 Query: 164 ---------GNTNFADL------------------------SSKIALLSSAMDVPLLLKE 190 G +F + + PL++K Sbjct: 221 VLLRTLLKHGMPHFENSFATRGAPIISASVLRDFSARDHLSWPHFDRIRRQWKGPLIIKG 280 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + LS+ D G ++ GG S + DI Sbjct: 281 I---LSAEDARQARLHGADGIIVSNHGGRQLDGAVSPLRVLPDI---------------- 321 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLR 309 + + G+R G D+LK++ LGA + PF A+ V A L Sbjct: 322 --VDVAQDMTVMMDSGVRRGSDVLKALALGARCVFVGRPFNYAAAVAGEAGVAHACRLLY 379 Query: 310 KEFIVSMFLLGTKRVQELY 328 E +M +LG EL+ Sbjct: 380 DEVDRNMAMLGVNSCAELH 398 >gi|327393593|dbj|BAK11015.1| L-lactate dehydrogenase LldD [Pantoea ananatis AJ13355] gi|327396722|dbj|BAK14143.1| L-lactate dehydrogenase [Pantoea ananatis AJ13355] Length = 387 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L D ++ G ++ GG Sbjct: 234 WKDLEWIRESWQGNLIIKGI---LEPEDARNAVRLGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +PT +L +A ++ + G+R+GVD+++ + LGA L + Sbjct: 284 -----------VPTARALPRVADAVGDDLTVLVDSGIRSGVDVIRMLALGAKGVLLGRAY 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A V + ++ V+M L G ++ Sbjct: 333 IYALAAAGEQGVEHLLRLYAEDMKVTMTLTGATSPSDI 370 >gi|257897903|ref|ZP_05677556.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium Com15] gi|257835815|gb|EEV60889.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium Com15] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHVLRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVRQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|257886722|ref|ZP_05666375.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,141,733] gi|257892920|ref|ZP_05672573.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,408] gi|257822776|gb|EEV49708.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,141,733] gi|257829299|gb|EEV55906.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,408] Length = 367 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHILRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVRQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|163746113|ref|ZP_02153472.1| L-lactate dehydrogenase, putative [Oceanibulbus indolifex HEL-45] gi|161380858|gb|EDQ05268.1| L-lactate dehydrogenase, putative [Oceanibulbus indolifex HEL-45] Length = 399 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 69/367 (18%), Positives = 115/367 (31%), Gaps = 84/367 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALP-EISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 + RN+ D L+ L E S D VE +G+KL P +S M+G Sbjct: 53 EATKHRNRAALDRVGLMPSVLHGEFS---PDLGVELMGQKLPLPFGMSPLGMSGLIWPDA 109 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQYAPHTVLISNLG 124 E +LA AA++ + + + H + + R T +++ Sbjct: 110 E---AHLARAADRAGIPFGLSTVAAASPEDVAPHLGKHGWFQLYPPRDPEIRTDMLARAK 166 Query: 125 AVQ-----LNYDFGVQ---------------------KAHQAVHVLGADGLFL----HLN 154 A L D V A A+ A G+ H+ Sbjct: 167 AAGFTTLVLTVDVPVASRRERQTRSGLTSPPKLTPRLMAQVAMRPAWAMGMARRGLPHMK 226 Query: 155 PLQEIIQPNGNTN-------------FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L + + N D + L D PL++K V L D Sbjct: 227 MLDKYTEGTATANLPPTAHVGYLLRTAPDWDY-LHWLRDHWDGPLVIKGV---LRPEDAT 282 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 ++G ++ G + + + +L R + Sbjct: 283 ALEQAGADAIWVSNHAGRQFDAAPA------------------SAEALPAIRAA-TKLPV 323 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 I G+ G+DIL++ LGA L F + A V I+ L ++ +M LG Sbjct: 324 IFDSGVETGLDILRAFALGADFVMLGRAFHIALAALGPRGVDHLIDLLARDLTANMGQLG 383 Query: 321 TKRVQEL 327 ++EL Sbjct: 384 AHNLREL 390 >gi|121595780|ref|YP_987676.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax sp. JS42] gi|120607860|gb|ABM43600.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax sp. JS42] Length = 383 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L LLLK + L D + ++ G ++ GG + Sbjct: 238 WQDIDWLRGQWKGRLLLKGI---LDVQDAQAAVQVGADGIVVSNHGGRQLDSVA------ 288 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 T L +A+ + + + GG+R+GVD+ K++ LGA + P Sbjct: 289 ------------STAAKLPAIAQAVGAQTEVLVDGGVRSGVDVFKALALGARGVLIGRPW 336 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + ++E +++M L G RV ++ Sbjct: 337 VWALAAQGEAGVRTLLAQWQRELLLAMTLAGVTRVADI 374 >gi|310790688|gb|EFQ26221.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 393 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 124/365 (33%), Gaps = 66/365 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + +D N+ F W ++ R L + D E G P+L++ + Sbjct: 41 AGELSTMDANRLAFRQWKIVPRFLRPNNPR--DLRTELFGLTYETPVLMAPIGVQGIFHA 98 Query: 65 ---TGGNNKMIE-RINRNLAIAAEKT--KVAMAVGSQRVMFS-----DHNAIKSFELR-Q 112 TG E ++ L+ AA T +VA G F D S R + Sbjct: 99 DKETGLAAACAELKVPYTLSTAATSTIEEVAEVCGDHHRWFQLYWPMDDEITASILRRAK 158 Query: 113 YAPHTVLISNLGAVQLNY-DFGVQKA--------------------HQAVHVLGADGLFL 151 + VL+ L V L + + A + D + Sbjct: 159 ANGYKVLVVTLDTVTLAWRPTDLDNAYLPQIAGTGNAVAFSDPVFRRKFAEQNDGDVVEE 218 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 ++ +ALL D P++LK V LS+ D +L ++ G+ Sbjct: 219 NVIGASRHWLSEAFPGEHHGWKDLALLKKHWDGPIVLKGV---LSAEDAKLAVEHGMSGV 275 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG + ++ +I ++ + G+R G Sbjct: 276 IVSNHGGRQLDGGVASLEMLPEI-----------------VEAVGDKLTVMFDSGIRTGA 318 Query: 272 DILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DI+K++ LGA + P + + + A I L + ++M L G K++ +L Sbjct: 319 DIVKALALGAKAVFVGRPAIYGLGIAGKEGAKAVIAGLLADLDLTMGLAGFKKISDL--T 376 Query: 331 TALIR 335 +++R Sbjct: 377 PSILR 381 >gi|254250045|ref|ZP_04943365.1| L-lactate dehydrogenase [Burkholderia cenocepacia PC184] gi|124876546|gb|EAY66536.1| L-lactate dehydrogenase [Burkholderia cenocepacia PC184] Length = 381 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 111/380 (29%), Gaps = 87/380 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK------------------- 53 + RN F+ L+ L +VD SV +G+ Sbjct: 32 ADDETTYRRNTSAFESCDLVPNVLRG--VRDVDLSVTVMGQKLGMPVYCSPTALQRLFHH 89 Query: 54 -----------KLSFPLLISSMTGGNNKMIERI-----------------NRNLAIAAEK 85 K +SS+ + + I NR + + + Sbjct: 90 DGERAVAAAAAKFDTMFGVSSLGTVSLEEARAISPGPQVYQFYFHKDRGLNREMMNRSRE 149 Query: 86 TKV---AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V + V S + + F + P + ++ + L + + Sbjct: 150 AGVNVMMLTVDSITGGNRERDKRTGFSI----PFRLTLAGMTEFALKPAWAINYLTH--E 203 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLKEVGCGLS 196 L H++ + + F D+ +A + + LK V +S Sbjct: 204 RFRLPQLDRHVDMGGGAMS--ISRYFTDMLDPSMSWDDVAAMVREWNGQFCLKGV---MS 258 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D G ++ GG + D +++ Sbjct: 259 VDDARRAADIGCTGIVLSNHGGRQLDGSRAAFDQLAEV-----------------VDAVG 301 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVS 315 + + GG++ G +LK++ LGA GL +L P A V A++ +R E Sbjct: 302 DRIDVMMDGGVQRGSHVLKALALGAKAVGLGRYYLFPLAAAGQPGVERALQLMRTEIERD 361 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L+G V +L N R Sbjct: 362 MRLMGCASVAQLGRNQLRFR 381 >gi|220913882|ref|YP_002489191.1| L-lactate dehydrogenase (cytochrome) [Arthrobacter chlorophenolicus A6] gi|219860760|gb|ACL41102.1| L-lactate dehydrogenase (cytochrome) [Arthrobacter chlorophenolicus A6] Length = 410 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 105/360 (29%), Gaps = 65/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F + L + +D S + LGK P+ I+ TG M Sbjct: 61 AEGEITLRRARQAFLNIEFRPGIL--RNVSSIDLSTDILGKPSRLPVGIAP-TGFTRMMQ 117 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFELR---------QYAPHT 117 + AAE + + + D N F+L + Sbjct: 118 SEGEYAGSQAAEAAGIPYTLSTMGTASIEDVAAAAPNGRNWFQLYLWTDRDRSLELIERA 177 Query: 118 VLISN-------------LGAVQLNYDFGVQKAHQAVHVLGADGL------FLHLNPLQE 158 N + + A VL A FL PL Sbjct: 178 AKAGNDTLMVTVDTAVAGARLRDVRNGMTIPPALTLTTVLDASYRPAWWFNFLTHEPLTF 237 Query: 159 IIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 ADL + L L++K + + D + G Sbjct: 238 ASLSRYTGTVADLINSMFDPTLTFEDLDWLRETWKGKLVVKGIQ---TVEDARRVVDHGA 294 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L D+ F +A + G+ Sbjct: 295 DGVVLSNHGGRQLDRAPIPFHLLPDVRQAFT--------------ADNRDAAIMLDTGIM 340 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ ++ LGA + +L M A V ++ L K+ +M LLG R+ +L Sbjct: 341 SGADIVAALALGADFTLIGRAYLYGLMAGGRAGVDRTLQILEKDMARTMALLGVSRIADL 400 >gi|126730591|ref|ZP_01746401.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Sagittula stellata E-37] gi|126708757|gb|EBA07813.1| glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal [Sagittula stellata E-37] Length = 372 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 103/369 (27%), Gaps = 97/369 (26%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---- 65 + + N + + + RAL I+ + LG+ L P+L++ M Sbjct: 32 LRGAGAEDTCRANLRDLEAIRIWPRALAPIAGGH--TRLTLLGQSLDAPMLVAPMAYLRV 89 Query: 66 -------------------------GGNN------------------KMIERINRNLAIA 82 G + LA Sbjct: 90 LDAGGEAGVAAAATAQGLGMCLSAQAGQPMEAVRDVGPACRWMQLYWQAGRAPTMALAER 149 Query: 83 AEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A + + + V + D F L P + NL + +Q Sbjct: 150 AARAGFTALVLTVDAPVNGIRDAEIASGFAL----PDGLRAVNLDGLPQPQFAPLQDRES 205 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + A L D +A + +P+LLK + L D Sbjct: 206 LLFDRVAHVL-------------------PDWED-VAWFCANAPLPVLLKGI---LHPDD 242 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +K+G ++ GG S + Sbjct: 243 ATQAVKTGAAGIIVSNHGGRVLDGAPSAIAALPGV-----------------VAQVGGAV 285 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R GVD+ +++ LGA+ + P A+ + V + LR E V+M L Sbjct: 286 PVLMDGGIRRGVDVFRALALGATAVLIGRPVCHGLAVAGALGVSHVLRLLRDELEVTMAL 345 Query: 319 LGTKRVQEL 327 G + + ++ Sbjct: 346 AGCRTLDDI 354 >gi|91762593|ref|ZP_01264558.1| l-lactate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] gi|91718395|gb|EAS85045.1| l-lactate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002] Length = 383 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + P LK V +S D + + G I+ GG S D Sbjct: 238 WKDAEYCVKRWNGPFALKGV---MSVEDAKRAIDIGCTAIMISNHGGRQLDGSRSPFDQV 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + I ++ + I GG+R G +LK++ GA+ FL Sbjct: 295 NVIRE-----------------AVGDKLEIILDGGVRRGTHVLKALAAGATACSFGKMFL 337 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V ++++ E +M L+G K ++ L ++ + R Sbjct: 338 FALSAGGQPGVERLLQNMHDEINRNMVLMGCKTLKGLDMSKLIYR 382 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN FDD LI L S + D S GKK+ P+ +S ++ Sbjct: 32 ADDEKTLKRNTDSFDDCDLIPNILA--SVGKPDLSTTVFGKKIDMPVFLSPTA--MQRLY 87 Query: 73 ERI-NRNLAIAAEKTK 87 ++ A AAEK Sbjct: 88 HHEGDKASARAAEKFG 103 >gi|301056980|gb|ADK54805.1| hydroxymandelate oxidase [uncultured soil bacterium] Length = 371 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 108/341 (31%), Gaps = 55/341 (16%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + ++ N+ D + R L +V LG+ P+ ++ + + Sbjct: 45 ETTLEANRTALDRIRFVSRVL--RDVSQVTTDATLLGRPAGLPVAVAPIA---YHRLVHP 99 Query: 76 NRNL--AIAAEKTKVAM-AVGSQRVMFSDHNAIKS------FELRQYAPHTVLI-----S 121 + L A AA+ V A V + A+ + LR+ L+ + Sbjct: 100 DGELVAARAAKTAGVPFIASTLSSVPIEEITAVGGTVWFQLYWLRETDQSLELVRRAEDA 159 Query: 122 NLGAVQLNYDFG---------------VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 AV L D A GA N + Sbjct: 160 GCEAVVLTVDVPWMGRRLRDVRNRFVLPGHVRAANITTGATAHQRSANASAVAVHTGEAF 219 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + A S +A L +PL+LK V L++ D +SG+ ++ GG Sbjct: 220 SPAVTWSTVAALRRQTALPLVLKGV---LAAEDALRAAESGVDAVVVSNHGGRQLDGAVP 276 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D D+ AR + + G+R+G D+L++I LGAS + Sbjct: 277 SIDALPDV-----------------ARAVGGSCEVLLDSGIRSGTDVLRAIALGASGVLV 319 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 P L A D + L E ++ L G V Sbjct: 320 GRPLLWGVAADGEAGAGRVLSLLADELRDALGLSGCDSVAA 360 >gi|88854912|ref|ZP_01129578.1| (S)-2-hydroxy-acid oxidase [marine actinobacterium PHSC20C1] gi|88816073|gb|EAR25929.1| (S)-2-hydroxy-acid oxidase [marine actinobacterium PHSC20C1] Length = 395 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L P ++K + + D +L + G ++ GG + S Sbjct: 241 WEDVKWLRELWGGPFMIKGIS---TIKDAKLAVDMGADAISVSNHGGNNIDGTPSPIRFL 297 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R G D++K++ LGA + +L Sbjct: 298 PSI-----------------VDAVGSDIDVMVDGGIRRGSDVVKAMALGAKAVFIGRAYL 340 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A+ D V +E +R +MF +G + +L ++ +I Sbjct: 341 YGLAVSGEDGVHKVLEIMRDGIDETMFGIGRDSIHDLSMDDLII 384 >gi|160896238|ref|YP_001561820.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] gi|160361822|gb|ABX33435.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Delftia acidovorans SPH-1] Length = 431 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 119/375 (31%), Gaps = 75/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F +W L R L + +VE G++ + P I+ M G N Sbjct: 77 AEDNASLRDNREVFGEWGLTTRVLA--DVSQRSQAVELFGERYASPFGIAPM-GINALST 133 Query: 73 ERINRNLAIAAEKTKV-------------------------AMAVGSQ--RVMFSDHNAI 105 R + LA AA++ + A G Q D Sbjct: 134 YRGDLVLARAAQRAGIVSVMSGTSLIPMEEVARESPATWFQAYIPGDQARIDALIDRVER 193 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQA----------VHVLGADGLFLHLN 154 F + +N ++ + ++ + + V L H Sbjct: 194 AGFRTLVVTVDIPISANRENNIRTGFSTPLKPSLRLAWDGMVRPGWVAGTFLRTLLRHGM 253 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ + +F+ I + PL++K V LS D Sbjct: 254 PHFENSFATRGAPIMSSSVMRDFSARDHLSWRHIEAIRRRWKGPLVIKGV---LSVEDAL 310 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG S + D+ + Sbjct: 311 QARRVGADGIVLSNHGGRQLDGAVSAMRILEDV-----------------VAALGPDYPV 353 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + GG R G D+LK++ LGA + + PF A +A V+ AI LR E ++ +LG Sbjct: 354 LIDGGFRRGSDVLKAVALGARMVLVGRPFNYAAAVGGEAGVLHAIGLLRDEVDRNLAMLG 413 Query: 321 TKRVQELYLNTALIR 335 L + + R Sbjct: 414 ASSCGALDRSHIVRR 428 >gi|134302604|ref|YP_001122575.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis WY96-3418] gi|134050381|gb|ABO47452.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis WY96-3418] Length = 385 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 122/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 15 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 73 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 189 INLSTKVPWCLNMLKTSNRTFGNIVNHAANKGGFASLGKWTNEQFDLSLNWHDVEWIQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + +G ++ GG S + +I Sbjct: 249 WNGRMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISVLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R G D+LK+ LGA+ G + P + Sbjct: 299 ----------IDAVDRKLEVLIDSGIRTGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFYQEMDKTMAFCGHTNIN 373 >gi|254776773|ref|ZP_05218289.1| lactate 2-monooxygenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 392 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 114/353 (32%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F W L R I+ ++ D SVE G + P+ ++ + G G Sbjct: 49 AGDEHTQRANCEAFKRWGLYPRM--GIAPEQRDMSVELFGTRFPSPIFMAPI-GVIGVCD 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNL-- 123 + A+ +T V VG+ + A + +F P + ++L Sbjct: 106 PDGHGDLACVRASIRTGVPFFVGTLSADPMEDLADELGDTPAFFQLYTPPDRKMAASLVH 165 Query: 124 ---GAVQLNYDFGVQK-----------------------AHQAVHVLGADGLFLHLNPLQ 157 A + A+ + GL +P + Sbjct: 166 RAEAAGFKGIAVTLDTWVTGWRPRDLSGGNYPQVPSGCLANYTSDPVFRAGLSRGEDPTE 225 Query: 158 EIIQPNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + F + L S +PL+ K + D+ G+ + Sbjct: 226 AAV--RKLPIFGGPFRWEDLEWLRSTTSLPLMAKGICH---PDDVRRAKDIGVDAIYCSN 280 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + G+P L + + G+R+G DI+K Sbjct: 281 HGGRQ------------------ANGGLPCLDCLPGVVEAADGLPVLFDSGVRSGADIVK 322 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA+ G+ P+ A+ D +V + SL E + M + G +++L Sbjct: 323 ALALGATAVGIGRPYAYGLALGGVDGIVHVLRSLLAEADLIMAVDGYPSLKDL 375 >gi|227552116|ref|ZP_03982165.1| possible (S)-2-hydroxy-acid oxidase [Enterococcus faecium TX1330] gi|257895288|ref|ZP_05674941.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium Com12] gi|293378158|ref|ZP_06624327.1| putative L-lactate oxidase [Enterococcus faecium PC4.1] gi|227178756|gb|EEI59728.1| possible (S)-2-hydroxy-acid oxidase [Enterococcus faecium TX1330] gi|257831853|gb|EEV58274.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium Com12] gi|292643022|gb|EFF61163.1| putative L-lactate oxidase [Enterococcus faecium PC4.1] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHILRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQLGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVRQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|2894155|emb|CAA11762.1| PCZA361.2 [Amycolatopsis orientalis] Length = 357 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 110/343 (32%), Gaps = 54/343 (15%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N+ + +I R L +V ++ G++ + P+ ++ + + + Sbjct: 32 EASLVANRTALERVFVIPRML--RDLTDVTTEIDIFGRRAALPMAVAPVA---YQRLFHP 86 Query: 76 NRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKS------FELRQYAPHTVLI---SNL 123 LA AA V + + V + A+ + LR L+ + Sbjct: 87 EGELAVARAARDAGVPYTICTLSSVSLEEIAAVGGRPWFQLYWLRDEKRSLDLVRRAEDA 146 Query: 124 GAVQLNYDFGVQK-AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL----------- 171 G + + V + + L + + + Sbjct: 147 GCEAIVFTVDVPWMGRRLRDMRNGFALPEWVTAANFDAGTAAHRRTQGVSAVADHTAREF 206 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + + D+P++LK + L+ D + +G ++ GG Sbjct: 207 APATWESVEAVRAHTDLPVVLKGI---LAVEDARRAVDAGAGGIVVSNHGGRQLDGAVPG 263 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ +I + + GG+R+G D+LK+ LGAS + Sbjct: 264 IEMLGEI-----------------VAAVSGGCEVLVDGGIRSGGDVLKATALGASAVLVG 306 Query: 288 SPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 P + A D V +E L +E +M L G + V Sbjct: 307 RPVMWALAAAGQDGVRQLLELLAEEVRDAMGLAGCESVGAARR 349 >gi|319442074|ref|ZP_07991230.1| dehydrogenase [Corynebacterium variabile DSM 44702] Length = 640 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 23/164 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +P++ K + L D E G ++ GG Sbjct: 280 WDMLTTLRDRTSLPVVFKGI---LDPEDAERAFAVGADAVVVSNHGGRQVDGF------- 329 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQ-FIASGGLRNGVDILKSIILGASLGGLASPF 290 + + +L R + + + G+R G D+ ++ LGA L P+ Sbjct: 330 -----------VSSLDALIEIRRHLGDEPTLLLDSGIRTGRDVAVALALGADAVLLGRPW 378 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + A+ I+++ E ++M L G K V L + Sbjct: 379 MYGLAVAGRRGAEEVIQNVLAELELTMALCGAKNVAGLRGTRVV 422 >gi|84500220|ref|ZP_00998486.1| L-lactate dehydrogenase, putative [Oceanicola batsensis HTCC2597] gi|84392154|gb|EAQ04422.1| L-lactate dehydrogenase, putative [Oceanicola batsensis HTCC2597] Length = 387 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 123/372 (33%), Gaps = 79/372 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F D L R ++ + + +G++++ P+ ++ + TG + Sbjct: 33 EQTFRENTADFQDIRLRQRV--AVNMEGRTLATRMIGQEVAMPVALAPVGLTG-MQRADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----------------FELRQYAPH 116 I A AAEK V + + + + A + L Q A Sbjct: 90 EI--KAARAAEKAGVPFTLSTMSICSIEDVAEHTTKPFWFQLYTMKDQDYLRRLIQRAKD 147 Query: 117 T--------VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----------------- 151 + + LG + G+ + AD + Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPRLTPATIADLMTKWTWGLEMLRTERRKFGN 207 Query: 152 ---HLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 H+ +++ + KI + P++LK + L D L Sbjct: 208 IVGHVKGVEDTSRLGEWTAQQFDQKLDWKKIEEIKKLWGGPVILKGI---LDPEDAILAR 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIA 263 K G ++ GG I + +L+ + + ++ + Sbjct: 265 KVGCDAIVVSNHGGRQQDGA------------------ISSIRALDPILQAVGDDLEVHI 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+L++I +GA + P++ +A V A+E +R E ++M G + Sbjct: 307 DSGIRSGQDVLRAIAMGARGTYIGRPWVYGLGAMGEAGVTRALEVIRNELDIAMAFTGKR 366 Query: 323 RVQELYLNTALI 334 ++ + + L+ Sbjct: 367 DIENVDRSCILV 378 >gi|222111980|ref|YP_002554244.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Acidovorax ebreus TPSY] gi|221731424|gb|ACM34244.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax ebreus TPSY] Length = 382 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L S LLLK + L D + ++ G ++ GG + Sbjct: 238 WRDIDWLRSQWQGRLLLKGI---LDVQDAQAAVQVGADGIVVSNHGGRQLDSVA------ 288 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 T L +A+ + + + GG+R+GVD+ K++ LGA + P Sbjct: 289 ------------STAAKLPAIAQAVGAQTEVLVDGGVRSGVDVFKALALGARGVLIGRPW 336 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + ++E +++M L G RV ++ Sbjct: 337 VWALAAQGEAGVHTLLAQWQRELLLAMTLAGVTRVADI 374 >gi|294618364|ref|ZP_06697944.1| peroxisomal (S)-2-hydroxy-acid oxidase [Enterococcus faecium E1679] gi|291595375|gb|EFF26688.1| peroxisomal (S)-2-hydroxy-acid oxidase [Enterococcus faecium E1679] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 107/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L +I D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHRLIIPHVLRDIEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDNGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVHQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|301064436|ref|ZP_07204855.1| dehydrogenase, FMN-dependent [delta proteobacterium NaphS2] gi|300441446|gb|EFK05792.1| dehydrogenase, FMN-dependent [delta proteobacterium NaphS2] Length = 318 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 110/328 (33%), Gaps = 38/328 (11%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 ++ V + I N++ D + + R I + D LG L P+++SSMT Sbjct: 23 LDGVETEFVISNNRRILDRFTVRQRC---IDGTKPDTRCTVLGLDLKTPVIMSSMTMPIP 79 Query: 70 KMIERINRNLAIAA--EKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++E N L A ++ + G+ D A P GA+ Sbjct: 80 AIME--NGLLQTAKGLKEAGSLIWTGTPVPKNLKDIVATGVPVAANVKPLINREKMFGAI 137 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 GV + + G +H + + ++ + + PL Sbjct: 138 DEVQSAGVNWIG--IEIDSGQGTKIHDKQV-------ASDCSPLTLKELKEIRKRVFTPL 188 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 + K V LS D + L++G ++ G + + + +I Sbjct: 189 IFKGV---LSKEDADKSLEAGADGIFLSNHGAHTLDYLPHPFQVMDEI------------ 233 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAI 305 EA + G R G D+ K + GA L GL P L A ++ V I Sbjct: 234 -----VEIVQGEAVILVDSGFRRGSDVFKGLAFGAQLVGLGRPILYGLAAHGAEGVREVI 288 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + +E M + G+ + + N + Sbjct: 289 HEITRELERFMSMTGSVDARHVKRNLLI 316 >gi|116694411|ref|YP_728622.1| L-lactate cytochrome reductase [Ralstonia eutropha H16] gi|113528910|emb|CAJ95257.1| L-Lactate cytochrome reductase [Ralstonia eutropha H16] Length = 381 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 109/377 (28%), Gaps = 90/377 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F R + E + +G+ +S P+ I+ TG G Sbjct: 33 EYTYRANEADFQRIEFRQRV--AVDITERSTASTMVGQPVSMPVAIAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV--------------------MFSDHNAIKSFELRQY 113 I A AA++ + + + + + D ++S R Sbjct: 90 EILA--ARAAKRHGIPFTLSTMSICPIEAVAEATGRHPFWFQLYVLRDRTFVESLIDRAR 147 Query: 114 APHT------VLISNLGAVQLNYDFGVQK-----AHQAVHVL------------------ 144 + + + G + G+ V++ Sbjct: 148 NANCSALVVTMDLQVFGQRHKDKKNGLSTPPKPTLRNLVNMASKPRWCIGMLGTRHRQFG 207 Query: 145 -------GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 G D + + QE P + + + D L++K + Sbjct: 208 NIVGHARGVDKIGSLVEWTQEQFDPRLS------WQDVEWIKKRWDGKLIVKGIQ---DP 258 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D L + SG ++ GG S I T + + Sbjct: 259 EDARLAVASGADAIIVSNHGGRQLDGAASS---------------ISTLPRIVEV--VGD 301 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSM 316 + GG+R+G D+LK+I LGA + + V A+ ++ E +SM Sbjct: 302 RVEVHMDGGIRSGQDVLKAIALGARGTYIGRAMMYGLGALGEQGVTTALNIIQNELDLSM 361 Query: 317 FLLGTKRVQELYLNTAL 333 G +Q + + L Sbjct: 362 AFCGKTDIQSVDRSILL 378 >gi|164654894|ref|XP_001728585.1| hypothetical protein MGL_4274 [Malassezia globosa CBS 7966] gi|159102452|gb|EDP41371.1| hypothetical protein MGL_4274 [Malassezia globosa CBS 7966] Length = 399 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L D P++LK + + D +L +K G+ ++ GG + S ++ Sbjct: 252 WDDLKYLREYWDGPIVLKGI---MDVEDAKLAVKHGMDGIVVSSHGGRQVNDSVSSIEVL 308 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I ++ + G+R+G DI K++ LGA + + P + Sbjct: 309 PEI-----------------VDAVGDKLDVLFDSGIRSGTDIAKALALGAKMVLVGRPCV 351 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 AM + + L + +SM L G +++ LN + +R Sbjct: 352 YGLAMGGQKGALHVLRCLLADLELSMRLCGVASIEKEELNPSRLR 396 >gi|167564700|ref|ZP_02357616.1| putative L(+)-mandelate dehydrogenase [Burkholderia oklahomensis EO147] Length = 392 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 66/378 (17%), Positives = 127/378 (33%), Gaps = 78/378 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L + +VE G++ + P I+ M G + + Sbjct: 40 AEDNRTRDDNRAVFDEYGFVTRVL--CDVSQRQQAVELFGQRFASPFGIAPM-GIHALSV 96 Query: 73 ERINRNLAIAAEKTKV-AMAVG--------------------------SQRVMFSDHNAI 105 R + LA AA+ + ++ G S+ + A Sbjct: 97 YRGDVVLARAAQHAGIVSIMSGSSLIPLEEVAAAAPGTWFQAYLPGDASRIRALLERVAR 156 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHV----------LGADGLFLHLN 154 + + +N V+ + ++ + + A L H Sbjct: 157 AGYRTLVITVDIPVSANRENNVRTGFSTPLRPSLRLFWDGLTRPSWLLGTFARTLLKHGM 216 Query: 155 PLQE---------IIQPNGNTNFA-----DLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 P E I+ N +F+ + + + + L++K + LS D Sbjct: 217 PHFENSFATRGAPILSANVLRDFSARDHLNW-THVRQIRRQWTGDLVIKGI---LSVEDA 272 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + ++G ++ GG S + D+ + ++ Sbjct: 273 VIAREAGADGIILSNHGGRQLDGASSPMRILRDV-----------------VQTVGDDYP 315 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + G R G D+LK++ LGA + + PF A+ V AI L++E +M +L Sbjct: 316 VMIDSGFRRGSDVLKALALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLQEEVDRNMAML 375 Query: 320 GTKRVQELYLNTALIRHQ 337 G EL LIR + Sbjct: 376 GANGCGEL-TPDMLIRKR 392 >gi|319761334|ref|YP_004125271.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] gi|330823209|ref|YP_004386512.1| (S)-2-hydroxy-acid oxidase [Alicycliphilus denitrificans K601] gi|317115895|gb|ADU98383.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] gi|329308581|gb|AEB82996.1| (S)-2-hydroxy-acid oxidase [Alicycliphilus denitrificans K601] Length = 365 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 114/349 (32%), Gaps = 53/349 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D + N+ F W ++ R L ++ ++ G L PLL++ + + ++ Sbjct: 37 CGWDATVAANRAAFAGWAVLPRLLRDVRAGH--TRLQLAGMDLPHPLLLAPVA--HQRLA 92 Query: 73 ERINR-NLAIAAEKTK---------------VAMAVGSQR--VMFSDHNAIKSFELRQYA 114 A AA+ T +A A G R ++ S +L + A Sbjct: 93 HPDAEIATARAAQATGSCLVASTLSSCTLEDIAAASGPARWFQLYLQPEREHSLDLLRRA 152 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------NPLQEIIQPNG 164 + + + + + A QA + AD + +L E G Sbjct: 153 EAAGYRAIVLTLDASIQLASRGALQAGFAMPADCVSANLARYPQPAPAQPAAGESRIFQG 212 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 A + L ++ +P+ +K V L D +G ++ GG S Sbjct: 213 AMRHAPRWDDLRWLLASTRLPVWIKGV---LHPEDARELQAAGAAGLIVSNHGGRSLDGA 269 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + + + + GG+R+G D K++ LGA Sbjct: 270 PASLRMLPALRT-----------------AVGAGYPLLLDGGVRSGQDAFKALALGADAV 312 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + A+ + V ++ L +E M G R+ ++ +T Sbjct: 313 LVGRLQVYALAVAGALGVAHMLQMLVEELHACMAQAGCARLSDITHDTL 361 >gi|41409584|ref|NP_962420.1| hypothetical protein MAP3486 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398415|gb|AAS06036.1| hypothetical protein MAP_3486 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 392 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 117/353 (33%), Gaps = 64/353 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F W L R I+ ++ D SVE G + P+ ++ + G G Sbjct: 49 AGDEHTQRANCEAFKRWGLYPRM--GIAPEQRDMSVELFGTRFPSPIFMAPI-GVIGVCD 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDH---NAIKS---FEL-----RQYAPHTV- 118 + A+ +T V VG+ + + F+L R+ A V Sbjct: 106 PDGHGDLACVRASIRTGVPFFVGTLSADPMEDLADELGDTPAFFQLYTPPDRKMAASLVH 165 Query: 119 --LISNLGAVQLNYDFGVQ-------------------KAHQAVHVLGADGLFLHLNPLQ 157 ++ + + D V A+ + GL +P + Sbjct: 166 RAEAASFSGIAVTLDTWVTGWRPRDLSGGNYPQVPSGCLANYTSDPVFRAGLSRGEDPTE 225 Query: 158 EIIQPNGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + F + L S +PL+ K + D+ G+ + Sbjct: 226 AAV--RKLPIFGGPFRWEDLEWLRSRTSLPLMAKGICH---PDDVRRAKDIGVDAVYCSN 280 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + G+P L + + G+R+G DI+K Sbjct: 281 HGGRQ------------------ANGGLPCLDCLPGVVEAADGLPVLFDSGVRSGADIVK 322 Query: 276 SIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ LGA+ G+ P+ A+ D +V + SL E + M + G +++L Sbjct: 323 ALALGATAVGIGRPYAYGLALGGVDGIVHVLRSLLAEADLIMAVDGYPSLKDL 375 >gi|256378083|ref|YP_003101743.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Actinosynnema mirum DSM 43827] gi|255922386|gb|ACU37897.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Actinosynnema mirum DSM 43827] Length = 373 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 24/174 (13%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P G + + +A L ++ +P+L+K V L D +L +++G ++ GG Sbjct: 213 PIGMSAGSSWDD-LAALVASTPLPVLVKGV---LHPADADLAVRAGAAGVLVSNHGGRQS 268 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 P +L + + GG+R G D+ ++ LG Sbjct: 269 DVTP------------------PAVTALPAVVDAVAGRVPVLVDGGVRRGSDVAVALALG 310 Query: 281 ASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 AS G+ P A D V +E LR E+ ++ L G + +L + + Sbjct: 311 ASAVGVGRPVVWGLAADGEAGVRRVLEVLRDEYDHALALCGGRSNADLTRDLVV 364 >gi|108798957|ref|YP_639154.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. MCS] gi|119868072|ref|YP_938024.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. KMS] gi|108769376|gb|ABG08098.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. MCS] gi|119694161|gb|ABL91234.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. KMS] Length = 386 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 116/367 (31%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N+ FD+W L+ R + E D SV+ G L P+ ++ + G G Sbjct: 49 AGDERTQRVNRTAFDNWGLVPRMF--RATRERDLSVDLFGLSLPAPVFMAPI-GVIGICA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V M V ++ + T L + Sbjct: 106 QDGHGDLATARAAARTGVPMVV----STLTEDPLED---VAAEFGETPGFFQLYTPT-DR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHL---------------NPLQE----IIQPNGNTNFADL 171 + +A G G+ + L N Q + + F Sbjct: 158 ELAASLVQRA-EAAGYKGIIVTLDTWVPGWRPRDLSTSNFPQLRGRCLANYTSDPVFRAG 216 Query: 172 SSKIAL-------------------------LSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 ++ L S +P++LK + + D Sbjct: 217 LAQPPEENPQGAVLKWVSLFGNPLTWDDLPWLRSLTKLPVILKGICH---ADDARRAKDE 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + G Sbjct: 274 GVDGIYCSNHGGRQ------------------ANGGLPAIDCLPGVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI+K++ LGA+ G+ P+ A+ D VV + SL E ++M + G + Sbjct: 316 IRSGSDIVKALALGATAVGIGRPYAYGLALGGVDGVVHVLRSLLAEADLTMAVDGYPTLA 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLTPDTL 382 >gi|330946434|ref|XP_003306771.1| hypothetical protein PTT_19987 [Pyrenophora teres f. teres 0-1] gi|311315590|gb|EFQ85126.1| hypothetical protein PTT_19987 [Pyrenophora teres f. teres 0-1] Length = 470 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 98/340 (28%), Gaps = 74/340 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKM 71 I N + + R + +VD E G +P I M T G Sbjct: 138 ANTGASIKGNIDDWGRINFRPRVM--RDVGDVDTRREIFGHSSPYPFYICPMGTMGAIHP 195 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ---------------YAP- 115 + A + V V + S ++S++ Q Y P Sbjct: 196 GAEP--EMIRGAVRKGVHTVVSTASSK-SSEQIMQSYKDEQEQLGHGSPTQLFYQYYMPV 252 Query: 116 ---------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD-GLFLHLNPLQEIIQPNGN 165 H V + + D V A L A+ + L G Sbjct: 253 DRKKAIELLHIVKRCGYKGLWITVDTPVLGKRTADRYLQAEEAFAVGLAEESTADWEAGG 312 Query: 166 TNF----------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 N + + + A D ++LK + C D +L + G Sbjct: 313 DNAFAPAMGGRPVQGQLSPHLSWADLEWIRKAWDGHIVLKGIQCA---EDAKLAMDYGCD 369 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASG 265 ++ GG ++L R YC E + G Sbjct: 370 GILLSNHGGRQIHTAP------------------SALMTLLEIRTYCPEVLGKLEVFLDG 411 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAA 304 GLR+G D+LK++ LGA+ G+ PFL S V + Sbjct: 412 GLRDGNDVLKALCLGATAVGVGRPFLYALGAYGSKGVEST 451 >gi|221068723|ref|ZP_03544828.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] gi|220713746|gb|EED69114.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] Length = 392 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 104/364 (28%), Gaps = 78/364 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 N+ F L R ++ + +G++++ P+ I+ TG G Sbjct: 36 QGTYRANEDEFQTIKLRQRV--AVNMEGRSTRTTMIGEEVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---------FELRQYAPHTVLISNLG 124 I A AA+ V + + + + A + + +R A LI+ Sbjct: 93 EILG--AKAAKAFGVPFTLSTMSICSLEDIAEHTDHHPFWFQLYVMRDKAFMERLINRAK 150 Query: 125 AVQ---LNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 A L +Q Q + A+ L L P + Sbjct: 151 AANCSALVVTLDLQILGQRHKDIKNGLSTPPKPTLANLLNLATKPHWCLGMLGTKRRSFG 210 Query: 171 L---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + ++LK V + + D L Sbjct: 211 NIVGHVDGVGDVSSLSSWTADQFDPSLNWNDVEWIKKLWGGKIILKGV---MDAEDARLA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +SG ++ GG S I + + Sbjct: 268 AQSGADALVVSNHGGRQLDGAPSSIAALPSIAE-----------------AAGKDIEVWM 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + FL V A++ + KE +M G Sbjct: 311 DGGIRSGQDVLKARALGAQGTMIGRSFLYGLGAYGQAGVSKALQIIHKELDTTMAFCGHT 370 Query: 323 RVQE 326 + + Sbjct: 371 HIDQ 374 >gi|110681035|ref|YP_684042.1| putative L-lactate dehydrogenase [Roseobacter denitrificans OCh 114] gi|109457151|gb|ABG33356.1| putative L-lactate dehydrogenase [Roseobacter denitrificans OCh 114] Length = 389 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ + PL+LK + L + D + L G ++ GG S Sbjct: 235 WDEVKEIKKMWGGPLILKGI---LDAEDARMALNVGADAIVVSNHGGRQLDGALSSIRAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R+G D+LK++ LGA + F+ Sbjct: 292 PAILD-----------------AVGDKVEVHMDGGIRSGQDVLKALALGAKGTYIGRAFV 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V A+E + KE +M L G V +L + L+ Sbjct: 335 HGLGAMGGPGVTKALEIIHKELDTTMALCGETDVADLGRHNLLV 378 >gi|257882641|ref|ZP_05662294.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,502] gi|293568778|ref|ZP_06680092.1| L-Lactate oxidase [Enterococcus faecium E1071] gi|294621475|ref|ZP_06700643.1| Glycolate oxidase [Enterococcus faecium U0317] gi|257818299|gb|EEV45627.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,502] gi|291588495|gb|EFF20329.1| L-Lactate oxidase [Enterococcus faecium E1071] gi|291598916|gb|EFF29965.1| Glycolate oxidase [Enterococcus faecium U0317] Length = 367 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHVLRDVEL--PDTTTHFDKETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVHQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|170745292|ref|YP_001766749.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium radiotolerans JCM 2831] gi|170658893|gb|ACB27947.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylobacterium radiotolerans JCM 2831] Length = 397 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + PL+LK + L D E +G ++ GG S Sbjct: 236 WDDVRRIRDRWQGPLILKGI---LDVEDAEKAAATGADALIVSNHGGRQLDGAPSSIAAL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A + + GG+R+G D+LK++ LGA + FL Sbjct: 293 P---------GI--------ADAVGPRIEVLMDGGIRSGQDVLKAVALGAKGVFIGRAFL 335 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V ++E +R E +M L G + ++ + + Sbjct: 336 YGLGAYGQAGVARSLEIIRTELDTTMALCGHRDIRAVDRS 375 >gi|225020992|ref|ZP_03710184.1| hypothetical protein CORMATOL_01003 [Corynebacterium matruchotii ATCC 33806] gi|224946269|gb|EEG27478.1| hypothetical protein CORMATOL_01003 [Corynebacterium matruchotii ATCC 33806] Length = 439 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 107/369 (28%), Gaps = 86/369 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++R ++ F D L VD S E G + P I+ TG M Sbjct: 80 ADDEISMNRARQAFKDVEFHPSIL--NDVSNVDTSCEVFGGPSALPFGIAP-TGFTRLMQ 136 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A AA K + + + + +++ PH L V + Sbjct: 137 TEGELAGASAAGKAGIPFCLSTLGTTSIE-------DVKAANPHGRNFFQL-YVMRQREI 188 Query: 133 GVQKAHQAVHVLGADGLFLHLN-----------------PLQEIIQ--PNGNTNFADLSS 173 +A G D LF ++ P Q + N Sbjct: 189 SYGLVKRAA-AAGFDTLFFTVDTPIAGARLRDKRNGFSIPPQISLGTVANAIPRPWWWVD 247 Query: 174 ----------------------------------KIALLSSAMDVPLLLKEVGCGLSSMD 199 + + S L++K V + D Sbjct: 248 FLTTPTLSFASLSSTGGTVGELLNSAMDPSIQFSDLEEIRSMWPGKLVVKGVQ---NVED 304 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ GG R W +P E+ R + Sbjct: 305 SKKLADLGVDGIILSNHGGRQLDRAPVP------------FWLLP-----EVVREVGKDL 347 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFL 318 G+ +G DI+ ++ +GA + +L M +A V AIE L ++ +M L Sbjct: 348 DVTMDTGIMHGADIVAAMAMGAKFTFIGRAYLYGLMAGGEAGVTRAIEILAEQVRRTMQL 407 Query: 319 LGTKRVQEL 327 L + + EL Sbjct: 408 LQVETIDEL 416 >gi|331005033|ref|ZP_08328438.1| L-lactate dehydrogenase [gamma proteobacterium IMCC1989] gi|330421161|gb|EGG95422.1| L-lactate dehydrogenase [gamma proteobacterium IMCC1989] Length = 327 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 107/349 (30%), Gaps = 79/349 (22%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIERINRNLAIAAEKTKVAMAVGSQR 96 I + +G+ S PL I+ TG + E + A AAE+ + + + Sbjct: 2 IDVGQRQLGTTLVGETASMPLAIAPTGLTGIMHGSGEILA---AQAAEEAGIPFTLSTMS 58 Query: 97 VMFSDHNAIKS-----FELRQYAPHTVLISNL--------GAVQLNYDFGVQ-------- 135 + + K+ F+L + + A+ L D +Q Sbjct: 59 ICSIEQVREKTTKPFWFQLYVMRDRGFVRELIERAKAAECSALMLTADLQIQGQRHQDIK 118 Query: 136 ---------KAHQAVHVL-----------GADGLFLHLNPLQEIIQPNGNTNFADL---- 171 A+ + F +LN + N ++ Sbjct: 119 NGLSVPPRLTLKNALDMATKPRWVGGLLTSPSRSFGNLNTAK--TDGNSMKTLSEWIAGQ 176 Query: 172 ------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + L++K V L + D + +G ++ GG Sbjct: 177 FDPSLTWDDVEWIKQQWPGKLIIKGV---LDAEDARHAVHAGADAVVVSNHGGRQLDYAP 233 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D+ I Q + G+R+G D+LK++ +GA G Sbjct: 234 AAIDMLPAI-----------------IDAVGGNTQVLFDSGIRSGQDLLKAMAMGAQGGL 276 Query: 286 LASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + FL V AIE +RKE VSM L G + L NT Sbjct: 277 IGKAFLYGLGAMGKQGVTTAIELIRKELDVSMALTGNCDINHLRSNTIF 325 >gi|300690959|ref|YP_003751954.1| L-lactate dehydrogenase, FMN-linked [Ralstonia solanacearum PSI07] gi|299078019|emb|CBJ50661.1| L-lactate dehydrogenase, FMN-linked [Ralstonia solanacearum PSI07] Length = 383 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 69/370 (18%), Positives = 117/370 (31%), Gaps = 71/370 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R L + G+ +S P+ ++ TG G Sbjct: 33 EGTYRANEADFGAIKLRQRVL--VDMSGRSLDTTMAGQAVSMPVALAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLGA 125 I A AAE V ++ + + + A + + +R + LI A Sbjct: 90 EILA--AQAAEAFGVPFSLSTMSICSIEDVAAHTTQPFWFQLYVMRDRSFIEALIERAKA 147 Query: 126 -------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN------------- 165 V L+ Q+ + L A L+ Q +P Sbjct: 148 ARCSALIVTLDLQILGQRHKDVRNRLSAPPKITPLHLWQMACRPRWCLNMARTKRHSFGN 207 Query: 166 -----TNFADLSSKIALLSSAMDVPLLLKEVGCGLSS-------------MDIELGLKSG 207 N +DLSS + D L K+V S D ++SG Sbjct: 208 IVGHAKNVSDLSSLSVWTAEQFDPRLSWKDVEWIKSRWGGKLILKGILDEDDARAAVESG 267 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S ++ I + + G+ Sbjct: 268 ADALIVSNHGGRQLDGAPSSIEVLPRI-----------------VDAVGDRIEIHLDSGI 310 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R+G D+LK++ LGA + PFL V A+E +R E V+M L G + + + Sbjct: 311 RSGQDVLKAVALGARGVYIGRPFLYGLGAGGRRGVTRALEIIRSELDVTMALTGKRVITD 370 Query: 327 LYLNTALIRH 336 + + + R Sbjct: 371 VDRSVLVDRG 380 >gi|198419758|ref|XP_002130414.1| PREDICTED: similar to hydroxyacid oxidase 1 (mapped) [Ciona intestinalis] Length = 374 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 108/362 (29%), Gaps = 75/362 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK----KLSFPLLISSMTGGNNK 70 + + + + + + L+ LP ++ +EF + L P S + Sbjct: 30 DENTLRDSIQAYQRYKLVPSGLP-TQTCDLRTRIEFPKRGISLDLELPFGFSPV---GLM 85 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + LA + S H++ E++Q AP + + L V L+ Sbjct: 86 GAGHKDAELATTKAAENFGAC-----AILSSHSSKSIEEIQQAAPGCIKMLQL-YVYLSR 139 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-------------PL-QEIIQPNGNTNFADLS---- 172 + +A G + + ++ PL E N + L Sbjct: 140 EVSEALVQRA-ERAGFKAIVVTIDGQVRGIRYSTMRTPLGNEYQSGNFGSEEKKLLASVG 198 Query: 173 ---------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 I L S D+P++LK V L + D L + Sbjct: 199 LDVDKRRQGIGYEIKDPSLTWDDIKWLRSITDLPIILKGV---LRADDAIKALDYDVDGI 255 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG + D +I GG+R+G Sbjct: 256 MVSTHGGRQLDGTPAPIDALPEI-----------------VDAVKGRLVIFVDGGVRSGD 298 Query: 272 DILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+LKSI +GA + P L + V +++ + +M G R+ + Sbjct: 299 DVLKSIAVGADVVFFGRPMLWGLVWKGQAGVETVLQTYKDGLSTAMMRNGLSRLSNITRA 358 Query: 331 TA 332 Sbjct: 359 NV 360 >gi|329948276|ref|ZP_08295120.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 170 str. F0386] gi|328522800|gb|EGF49908.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 170 str. F0386] Length = 422 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 111/371 (29%), Gaps = 90/371 (24%) Query: 13 VCKDPGIDRNKKFFDDWHL----IHRALPEISFDEVDPSVEFLGKKLSFPLLISSM---- 64 + + R ++ F D +H AL +VD S E LG + + P I+ Sbjct: 59 AEGEVSLRRARQAFRDIEFHPDILHPAL------DVDTSCEILGGRSAMPFGIAPTGFTR 112 Query: 65 ------------------------TGGNN-----KMIER---------------INRNLA 80 T G K I+ L Sbjct: 113 LMQTEGEVAGAGAAGAAGIPFTLSTLGTTSIEDVKAANPHGRNWFQLYVMRQRDISYGLV 172 Query: 81 IAAEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 A + V + + F + ++ + +DF Sbjct: 173 ERAAAAGFDTLMFTVDTPVAGARLRDKRNGFSIPPQITAGTVLDAIPRPWWWFDF----- 227 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 L L + E++ + +D + ++ S +++K V + Sbjct: 228 -LTTPKLEFASLKSTGGTVGELLDNAMDPTISD--EDLKVIRSMWPGKIVIKGVQ---TV 281 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + + G+ ++ GG R L ++ R Sbjct: 282 EDSKRLIDLGVDGVLLSNHGGRQLDRAPVPFRLLPEV-----------------VREVGK 324 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSM 316 +A + G+ NG D++ ++ LGA G + +L M + V IE L E I +M Sbjct: 325 DATIMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREGVDRMIEILSDEVIRTM 384 Query: 317 FLLGTKRVQEL 327 LLG ++EL Sbjct: 385 KLLGVSSLEEL 395 >gi|171692325|ref|XP_001911087.1| hypothetical protein [Podospora anserina S mat+] gi|170946111|emb|CAP72912.1| unnamed protein product [Podospora anserina S mat+] Length = 460 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 112/342 (32%), Gaps = 63/342 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG------NNKMIER 74 N + L R L +S L +S P+ IS + G K I Sbjct: 135 ANSSLYSHLTLRPRILINVSTPTTPLVTTILNCPVSSPIFISPTSLGKIIHPSGEKAIAL 194 Query: 75 INRNLAIAAEKTKVAMAVGSQRVM------------FSDHNAIKSFELRQYAPHTVLISN 122 NL +A + A S+ + + D N + S + + A + + Sbjct: 195 ACSNLDMAQTISTSASFTLSEILSGQNTSHPAFLQLYVDKNRVNSERVIEEA----VRNG 250 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 + AV + D V +A + L P+ A ++ + A Sbjct: 251 VRAVMVTVDAPVPGKREADERIPTAAGGERLAPM------------AGTAAAVGDGKGAA 298 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++ + S D+ G G+ I+ GG S Sbjct: 299 LGRVMGGYIDDSFSWEDLGRGWWMGLS---ISNHGGRSLETATG---------------- 339 Query: 243 IPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDS 297 T L L + C + + GG+R G D+ K++ LGA G L + Sbjct: 340 --TILVLLELQRCCPGVFDRMEVLIDGGVRRGTDVFKALCLGARGVGFGRAPLWALGLYG 397 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELY---LNTALIRH 336 + V +E L E + +M + G ++EL+ +NT + H Sbjct: 398 REGVERYLEILNDELVTTMKMCGVTSLEELHPGLVNTRAVDH 439 >gi|241766257|ref|ZP_04764153.1| L-lactate dehydrogenase (cytochrome) [Acidovorax delafieldii 2AN] gi|241363646|gb|EER59044.1| L-lactate dehydrogenase (cytochrome) [Acidovorax delafieldii 2AN] Length = 388 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 108/364 (29%), Gaps = 78/364 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N F L R ++ + +G+ ++ P+ I+ TG G Sbjct: 36 EGTYRSNTADFQGIKLRQRV--AVNMEGRSTRTTMIGQDVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FEL-----RQYAPHTVLISN 122 I A AA+ + + + + + A + F+L R + + + Sbjct: 93 EILG--ARAAKAFGIPFTLSTMSICSIEDVAEHTGRHPFWFQLYVMRDRDFIERLIDRAK 150 Query: 123 L-GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQ-PNGNTNFA 169 G L +Q Q + A+ + L P + F Sbjct: 151 AAGCSALQLTLDLQILGQRHKDIKNGLSTPPKPTIANLINLATKPQWCLGMLATRRRTFG 210 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ S + + L+LK + + + D L Sbjct: 211 NIVGHAKGVGDLSSLSSWTAEQFDPQLNWSDVEWIKKRWGGKLILKGI---MDAEDARLA 267 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I A+ + + Sbjct: 268 ANSGADALIVSNHGGRQLDGAPSSIAALPAI-----------------AQAVGKDIEVWM 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + FL V A+E ++KE ++M G Sbjct: 311 DGGIRSGQDVLKARALGARGTLIGRSFLYGLGAYGEAGVTRALEIIQKELDITMAFCGHT 370 Query: 323 RVQE 326 + Sbjct: 371 DINA 374 >gi|257883951|ref|ZP_05663604.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,501] gi|261208757|ref|ZP_05923194.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium TC 6] gi|289565559|ref|ZP_06446006.1| lactate 2-monooxygenase [Enterococcus faecium D344SRF] gi|294614412|ref|ZP_06694328.1| lactate oxidase [Enterococcus faecium E1636] gi|257819789|gb|EEV46937.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,501] gi|260077259|gb|EEW64979.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium TC 6] gi|289162641|gb|EFD10494.1| lactate 2-monooxygenase [Enterococcus faecium D344SRF] gi|291592720|gb|EFF24313.1| lactate oxidase [Enterococcus faecium E1636] Length = 367 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 107/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHRLIIPHVLRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDNGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVHQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|254185143|ref|ZP_04891732.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1655] gi|184215735|gb|EDU12716.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1655] Length = 447 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 95 AEDNRTRDDNRAAFDEYGFVTRVLHDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 151 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 152 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 212 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 271 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 272 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 328 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 329 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 371 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 372 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 431 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 432 ANGCDAL-TPDMLIRKR 447 >gi|86748430|ref|YP_484926.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris HaA2] gi|86571458|gb|ABD06015.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris HaA2] Length = 379 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 117/368 (31%), Gaps = 70/368 (19%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 DH + + + N R L + + D S +G+K + PL+++ + G Sbjct: 27 DHGSYA--EETLRANVDDLKRIKFRQRIL--VDISKRDLSTTIIGEKSAMPLILAPV-GS 81 Query: 68 NNKMIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 + AA+ + M++ S + ++ + F+L + + Sbjct: 82 TGMQYGDGEIHACRAAQAAGIPYTLSTMSICSIEDVAANVDKPFWFQLYVMKDRGFVKAL 141 Query: 123 L------GAVQLNYDFGVQKAHQAVHVLG-----ADGLFLHLNPLQEIIQPN-------- 163 + L +Q Q + +F N L +P Sbjct: 142 IERAIAAKCSALVLTVDLQVIGQRHQDIKNGMTVPPEIFRPKNLLDIATKPGWVKGILGA 201 Query: 164 GNTNF----------ADLSSKIALLSSAMDVPLLLKEVGCG-------------LSSMDI 200 NF DL S A ++S D L K++ L D Sbjct: 202 KQRNFGNIAGHLPGSKDLESVSAWVASQFDASLNWKDIDWIRSIWPGKLIIKGILDVEDA 261 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +K G ++ GG S ++ +I + + Sbjct: 262 REAVKVGAEALVVSNHGGRQLDGAPSSIEVLPEI-----------------VHTVGSHIE 304 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R+G D+++++ LGA + ++ V AI+ + KE +M L Sbjct: 305 VMFDGGIRSGQDVMRALALGARSCMIGRAYIYGLGAYGGPGVAKAIDIIGKELSTTMGLC 364 Query: 320 GTKRVQEL 327 G + ++ Sbjct: 365 GVNAINQI 372 >gi|241767916|ref|ZP_04765473.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] gi|241360942|gb|EER57724.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Acidovorax delafieldii 2AN] Length = 231 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 23/176 (13%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 LN + + + + I L LLLK + L D + G Sbjct: 70 LNAFKAWVDAQFDPSVTW--KDIEWLRGHWKGRLLLKGI---LDVEDARSAMAVGAEGIV 124 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + S I A+ + + + GG+R+GVD Sbjct: 125 VSNHGGRQLDSVASSVSKLPAI-----------------AQAVGTQTEVLVDGGVRSGVD 167 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 I K++ LGA + P++ +A + A + +L++E +++M L G R ++ Sbjct: 168 IFKALALGARGVLIGRPWVWALAGGGEAGLSALLATLQRELLLAMTLAGVTRTADI 223 >gi|218288375|ref|ZP_03492665.1| Lactate 2-monooxygenase [Alicyclobacillus acidocaldarius LAA1] gi|218241348|gb|EED08522.1| Lactate 2-monooxygenase [Alicyclobacillus acidocaldarius LAA1] Length = 388 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 114/351 (32%), Gaps = 66/351 (18%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N++ F W ++ R + D S+E G KL +P+L++ + G ++ + Sbjct: 56 ETMRANEEAFAKWRIVPRVF--RDVSDRDLSIELFGDKLPYPVLLAPI--GVQSILHA-D 110 Query: 77 RNLAIA--AEKTKVAMAVGSQRVMF------SDHNAIKSFEL-----RQYAPHTVLISNL 123 +A A A K + V S M A F+L R A V + Sbjct: 111 GEVAAARGAAKLGLPYIVSSASTMSLETIAEKAPGATLWFQLYWSRDRDVAQSFVRRA-E 169 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------------------NPLQE 158 A + A + +L +P Sbjct: 170 AAGCKALVVTLDTPMMAWRERDLERAYLPFLLGEGLGNYLSDPAFRAKLRRPPEEDPASA 229 Query: 159 -IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 ++ + N + L D+PLLLK + L D E + G ++ G Sbjct: 230 ILLWTHIFGNPGLTWDDLDWLRQTTDLPLLLKGI---LHPDDAEEAFRRGADGIVVSNHG 286 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D + I + + + GG+R G D++K++ Sbjct: 287 GRQVDGAVASLDALAVI-----------------RQRVGPDRVVLMDGGIRRGSDVVKAL 329 Query: 278 ILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA+ + A+D V + L +F ++M L G + L Sbjct: 330 ALGANAVLVGRLYAYGLAVDGDRGVETVLRYLLADFDLTMALSGHSSLSTL 380 >gi|33600095|ref|NP_887655.1| FMN-dependent dehydrogenase [Bordetella bronchiseptica RB50] gi|33567693|emb|CAE31607.1| FMN-dependent dehydrogenase [Bordetella bronchiseptica RB50] Length = 397 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 76/244 (31%), Gaps = 24/244 (9%) Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQLNYDFGVQKAH 138 A A + + + V + DH+ F L + P +L + Sbjct: 152 AREARFSTLMVTVDTPVHGTRDHDVRNGFRLPLRPGPRLMLDFAAHPRWCLRMLRQRGGP 211 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 Q V++ + G LN Q + L P+L+K + LS Sbjct: 212 QLVNLARSMGEQASLN-RQAAAMSRQMDMGLGW-DALPWLRRHWQGPVLVKGI---LSVE 266 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D L L+ G ++ GG S ++ + Sbjct: 267 DARLALRHGADGIVLSNHGGRQLEGAPSALEVLPRVMD-----------------AVGTR 309 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMF 317 + GG+R G D+ K+ LGA L L A V + L++E ++ Sbjct: 310 LAVLVDGGVRRGSDVAKARALGAQAVLLGRAPLYGLAARGPRGVAEVLAILQRELETTLR 369 Query: 318 LLGT 321 L+G Sbjct: 370 LVGC 373 >gi|114797165|ref|YP_759910.1| L-lactate dehydrogenase [Hyphomonas neptunium ATCC 15444] gi|114737339|gb|ABI75464.1| L-lactate dehydrogenase (cytochrome) [Hyphomonas neptunium ATCC 15444] Length = 388 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 108/365 (29%), Gaps = 71/365 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + L R L + FLG L+ PL +S + G + M Sbjct: 34 AYAELTLRRNVADLEAIELRQRIL--RDVSALTTEKSFLGNTLTMPLALSPV-GLSGMMA 90 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGAVQ 127 R + A A + + + + + + A + F+L + + + Sbjct: 91 RRGEASAAKVAGEFGIPYCLSTLSICSVEEVAAATQGPLWFQLYMIRDRGSVADLIARAK 150 Query: 128 --------LNYDFGV-----QKAHQAVHVLGADGLFLHLNPLQEIIQPN-----GNTNFA 169 L D V + + G L L ++ P G Sbjct: 151 AAGASALVLTVDLPVVGTRYRDVRNTMSGGGGAWARLRRGLLSYMMHPGWSMDVGLRGGP 210 Query: 170 DLSSKIALLSSAMDVP--------------LLLKEVGC-------------GLSSMDIEL 202 + + +A P + K++ L D Sbjct: 211 HILANVAPYVPDAATPADFSAWANASLDPSVSWKDIEWIKAQWGGPLIIKGILDREDALE 270 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G ++ GG + S I + + Sbjct: 271 AVNCGADGIVVSNHGGRQLDGVASSIRALPPIAE-----------------AVSGKTLIL 313 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 GG+R+G DILK++ GA L + P++ + + + +++ E VSM L G Sbjct: 314 MDGGIRSGQDILKALSSGADLAMMGRPWVYALAGGGEKGLAHLLAAMKGELTVSMALTGI 373 Query: 322 KRVQE 326 +V E Sbjct: 374 TQVTE 378 >gi|126434557|ref|YP_001070248.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. JLS] gi|126234357|gb|ABN97757.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium sp. JLS] Length = 386 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 22/162 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +P++LK + D G+ + GG Sbjct: 242 WDDLPWLRSLTKLPVILKGICHA---DDARRAKDEGVDGIYCSNHGGRQ----------- 287 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P L + + G+R+G DI+K++ LGA+ G+ P+ Sbjct: 288 -------ANGGLPAIDCLPGVVEAADGLPVLFDSGIRSGSDIVKALALGATAVGIGRPYA 340 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ D VV + SL E ++M + G + +L +T Sbjct: 341 YGLALGGVDGVVHVLRSLLAEADLTMAVDGYPTLADLTPDTL 382 >gi|62260732|gb|AAX77931.1| unknown protein [synthetic construct] Length = 420 Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 122/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 41 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 98 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 99 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 155 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 156 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 214 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 215 INLSTKVPWCLNMLKTSNRTFGNIVNHAANKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 274 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + +G ++ GG S + +I Sbjct: 275 WNGRMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISVLEEI------- 324 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R G D+LK+ LGA+ G + P + Sbjct: 325 ----------IDAVDRKLEVLIDSGIRTGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 374 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 375 AYRVLEIFYQEMDKTMAFCGHTNIN 399 >gi|258544826|ref|ZP_05705060.1| L-lactate dehydrogenase [cytochrome] [Cardiobacterium hominis ATCC 15826] gi|258519931|gb|EEV88790.1| L-lactate dehydrogenase [cytochrome] [Cardiobacterium hominis ATCC 15826] Length = 385 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 114/360 (31%), Gaps = 73/360 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N + FD R L + +G+ + P+ I+ TG M Sbjct: 37 ESTLHHNTRDFDPIKFQQRVL--VDMTNRTLETTMIGETVKMPVAIAP-TGFTGMMYADG 93 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLIS---N 122 A AAEK V ++ + + + A + F+L R++ + + N Sbjct: 94 EILAAKAAEKFGVPFSLSTMSICSIEDVAANTSKPFWFQLYVMRDREFMEDLIKRAKAAN 153 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL- 171 A+ L D V Q+ + L A LN + ++P F ++ Sbjct: 154 CSALILTADLQVLGQRHRDIKNGLSAPPKPTLLNMMDLALRPQWCWHMLHTKRRTFGNIV 213 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + L++K + +++ D E KS Sbjct: 214 GHAKNVSDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGI---MTTDDAEKAAKS 270 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + DI ++ + G Sbjct: 271 GADALIVSNHGGRQLDGALSTIKVLPDI-----------------VSAVGSQIEVWLDSG 313 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +G DILK I LGA + FL D V +E L E +M G ++ Sbjct: 314 IVSGQDILKCIALGAKGTMIGKSFLYGLGAYGEDGVRRCLEILYTEMDTTMAFCGHTDIK 373 >gi|239814338|ref|YP_002943248.1| L-lactate dehydrogenase (cytochrome) [Variovorax paradoxus S110] gi|239800915|gb|ACS17982.1| L-lactate dehydrogenase (cytochrome) [Variovorax paradoxus S110] Length = 385 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 107/367 (29%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N+ F L R ++ + +G+ ++ P+ I+ TG G Sbjct: 33 AWTESTYRANESDFQKIKLRQRV--AVNMEGRSTRSTMIGQDVAMPVAIAP-TGLTGMQH 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FEL-----RQYAPHTV- 118 I A AA+ + + + + + A + F+L R + + Sbjct: 90 ADGEILG--ARAAKAFGIPFTLSTMSICSLEDIAEHTGRHPFWFQLYVMKDRDFIERLIE 147 Query: 119 --LISNLGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNGNT 166 +N+ A+QL D + + + A+ + L P + Sbjct: 148 RARAANVSALQLTLDLQI-LGQRHKDIKNGLSTPPKPTIANMINLATKPHWCLGMLGTRR 206 Query: 167 NFAD---------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + + + L+LK + + D Sbjct: 207 RTFGNIAGHAKGVKDLSSLSSWTAEQFDPALSWADVEWIKKRWGGKLILKGI---MDVED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 L SG ++ GG S I E Sbjct: 264 ARLAAASGADALIVSNHGGRQLDGAPSSIAALPAI-----------------VDAVGREI 306 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R+G D+LK+ LGA + FL V A++ + KE ++M Sbjct: 307 EVWMDGGIRSGQDVLKARALGARGTLIGRSFLYGLGAHGQAGVTRALQIIHKELDITMAF 366 Query: 319 LGTKRVQ 325 G ++ Sbjct: 367 CGRTDIE 373 >gi|206564113|ref|YP_002234876.1| putative FMN-dependent dehydrogenase [Burkholderia cenocepacia J2315] gi|198040153|emb|CAR56136.1| putative FMN-dependent dehydrogenase [Burkholderia cenocepacia J2315] Length = 381 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + + LK V +S D + G ++ GG + D Sbjct: 237 WDDVAAMVREWNGQFCLKGV---MSVDDARRAVDIGCTGIVLSNHGGRQLDGSRAAFDQL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++I + + GG++ G +LK++ LGA GL +L Sbjct: 294 AEI-----------------VDAVGDRIDVMMDGGVQRGSHVLKALALGAKAVGLGRYYL 336 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A V A++ +R E M L+G V +L + R Sbjct: 337 FPLAAAGQPGVERALQLMRAEIERDMRLMGCASVAQLGRDQLRFR 381 Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + RN + F+ L+ L +VD SV +G+KL P+ S Sbjct: 32 ADDEATYRRNTRAFERCDLVPNVLRG--VRDVDLSVTVMGQKLGMPVYCSPTA 82 >gi|146342782|ref|YP_001207830.1| putative L-lactate dehydrogenase (cytochrome)/FMN-dependent alpha-hydroxy acid dehydrogenase [Bradyrhizobium sp. ORS278] gi|146195588|emb|CAL79615.1| putative L-lactate dehydrogenase (Cytochrome); FMN-dependent alpha-hydroxy acid dehydrogenase [Bradyrhizobium sp. ORS278] Length = 378 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 117/362 (32%), Gaps = 71/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + + N+ R L + + D S LG+ S PL+++ + G G Sbjct: 32 AEETLRANRDDLQKIKFRQRIL--VDVSKRDLSTTILGEPSSMPLVLAPV-GLLGMQHGD 88 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL---- 123 I+ AA+ + M++ S + S F+L + + + Sbjct: 89 GEIHA--CRAAQAAGIPFTQSTMSICSIEDIASSVEKPFWFQLYVMKDRGFIKALIERAI 146 Query: 124 --GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNP--LQEIIQPNGNT-- 166 L +Q Q + + P +Q ++Q T Sbjct: 147 AAKCTALCLTVDLQVIGQRHQDIKNGMSVPPEWSLSKLFDFATKPAWVQGVLQGKRRTFG 206 Query: 167 -------NFADLSSKIALLSSAMDVPLLLKEVGCGLSS-------------MDIELGLKS 206 N DL+ A +S D L K+V S D +L + Sbjct: 207 NIAGHVKNTEDLTKLSAWTASQFDTSLNWKDVDWIRSIWPGKLIIKGIHDIEDAKLAAAT 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G + ++ GG S + GI A ++ + + GG Sbjct: 267 GAQAMVVSNHGGRQLDGAPSSIHVLP---------GI--------AEAVGDKIEIMFDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+++++ LGA + + V AI+ +R E + +M L G V Sbjct: 310 IRSGQDVMRALALGAKSCMIGRAYAYGLGAGGQVGVAKAIDIIRNELLTTMGLCGVNTVA 369 Query: 326 EL 327 E+ Sbjct: 370 EI 371 >gi|148253340|ref|YP_001237925.1| putative L-lactate dehydrogenase (cytochrome) [Bradyrhizobium sp. BTAi1] gi|146405513|gb|ABQ34019.1| putative L-lactate dehydrogenase (Cytochrome) [Bradyrhizobium sp. BTAi1] Length = 378 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 71/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + + N+ R L + + D S LG+ S PL+++ + G G Sbjct: 32 AEETLRANRDDLQKIKFRQRIL--VDVSKRDLSTTILGEPSSMPLILAPV-GLLGMQHGD 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSDH----NAIKSFELRQYAPHTVLISNL---- 123 I+ AA+ + + + D F+L + + + Sbjct: 89 GEIHA--CRAAQAAGIPFTQSTMSICSIEDIAGSVEKPFWFQLYVMKDRGFIKALVERAI 146 Query: 124 --GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNP--LQEIIQPNGNT-- 166 L +Q Q + + P +Q ++Q T Sbjct: 147 AAKCTALCLTVDLQVIGQRHQDIKNGMSVPPEWSLSKLFDFATKPAWVQGVLQGKRRTFG 206 Query: 167 -------NFADLSSKIALLSSAMDVPLLLKEVGCGLSS-------------MDIELGLKS 206 N DL+ A +S D L K+V S D +L +++ Sbjct: 207 NIAGHVKNTEDLTKLSAWTASQFDTSLNWKDVDWIRSIWPGKLIIKGIHDIEDAKLAVET 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G + ++ GG S + GI A ++ + + GG Sbjct: 267 GAQAMVVSNHGGRQLDGAPSSIHVLP---------GI--------ADAVGDKIEIMFDGG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+++++ LGA + + A V AI+ +R E + +M L G V Sbjct: 310 IRSGQDVMRALALGAKSCMIGRAYAHGLGAGGQAGVAKAIDIIRNELLTTMGLCGVNTVA 369 Query: 326 EL 327 E+ Sbjct: 370 EI 371 >gi|171913871|ref|ZP_02929341.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Verrucomicrobium spinosum DSM 4136] Length = 382 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 115/352 (32%), Gaps = 58/352 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN++ F + L R L ++ + LG + P+ ++ + ++M Sbjct: 40 AGDEITVRRNREAFTELALAPRVLAPMTGGH--TRISLLGHEYDHPIFLAPIA--YHRMA 95 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 + +A A A K M + + M + A ++L + L Sbjct: 96 HP-DGEVATALGASALKAGMILSTHASMLLEQVAAAAQAPLWYQLYLQPDRGFIRELLQR 154 Query: 126 VQ----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--------------- 166 V V + + LF L P E + G Sbjct: 155 VAAAGYRAIVLTVDAPLKGLRNREHHALFK-LPPGIEAVNLKGMKSLPPVYAQPGAPSIY 213 Query: 167 -----NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + A IA L +P+++K + + D L L+ + ++ GG + Sbjct: 214 FGPHLDAALTWKDIAWLQENTHLPIIVKGI---MHPDDASLALQHQVAGMVVSNHGGRTL 270 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + ++ I + + GG+R G DILK++ LGA Sbjct: 271 DTAPATIEVLPAIAD-----------------RVAGQVPILLDGGIRRGTDILKALALGA 313 Query: 282 SLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + P++ + V + LR E ++M G + ++ +T Sbjct: 314 KAVLIGRPYIYGLAAAGAVGVAHVLNILRAELEMAMAFTGRATLDQVDASTL 365 >gi|312218944|emb|CBX98889.1| similar to peroxisomal (S)-2-hydroxy-acid oxidase [Leptosphaeria maculans] Length = 400 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 17/169 (10%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 PN N+ + + ++ ++ + +K + ++ D L G+ ++ GG Sbjct: 233 PNPTLNWDRDIAWLKIICQP-EMQVWVKGIA---TAEDALLACHHGVDGIIVSNHGGRQL 288 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D ++ ++ A+ + GG+R+G D+ K+I LGA Sbjct: 289 NGALATIDALPEV-----------VEAVHSAQGDR-KIPVHVDGGIRHGTDVFKAIALGA 336 Query: 282 SLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + P L A + V A+ L E + M L G +V+++ Sbjct: 337 DFVWIGRPVLWGLAYKGQEGVELALRLLGDEIRLCMGLAGVTKVEDIRK 385 >gi|302556022|ref|ZP_07308364.1| L-lactate oxidase [Streptomyces viridochromogenes DSM 40736] gi|302473640|gb|EFL36733.1| L-lactate oxidase [Streptomyces viridochromogenes DSM 40736] Length = 389 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 111/345 (32%), Gaps = 60/345 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N+ + ++ R L E D SVE LG+ LS PL ++ + G + M Sbjct: 51 AGNGSTARANRAALERRRIVPRVL--RDVHERDLSVEVLGRALSAPLALAPV-GVLSIMH 107 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF--------------------SDHNAIKSFELRQ 112 A AA V + S D +SF R Sbjct: 108 PDAETAAARAAAAQGVPFVLSSASSTPMEQVAEAMGDAERWFQLYWPRDPEVARSFLNRA 167 Query: 113 YAP---------HTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGLF--LHLNPLQ 157 A T L++ +L L + GV A+ GL +H +P Sbjct: 168 RAAGFGVLVVTLDTPLLAWRPRDLDQAYLPFLHGVGTANYFSDPAFQAGLARPVHEDPNA 227 Query: 158 EIIQ-PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + A +A L D P++LK V L D ++G+ ++ Sbjct: 228 AVTHFVQMFADPAKTWPDLAFLRENWDGPIVLKGV---LHPDDARQAAEAGMDGVVVSNH 284 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + + D + + + G+R G DI K+ Sbjct: 285 GGRQVAGSVAAADALPRVAE-----------------AVGDRLTVLFDSGVRTGDDIFKA 327 Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + LGA + P++ +D V I L E +++ L G Sbjct: 328 LALGARAVLVGRPYVYGLGLDGGPGVEHVIRCLLAELDLTLALSG 372 >gi|254465906|ref|ZP_05079317.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] gi|206686814|gb|EDZ47296.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] Length = 388 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 122/371 (32%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTSDFEKIRLRQRV--AVDMSGRTTASRMIGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FE---------LRQYAPHT-- 117 I A AAE V + + + + A + F+ +R+ Sbjct: 90 EI--KAARAAEDFGVPFTLSTMSINSIEEVAEATSKPFWFQLYTMKDEDYIRRLIQRAKD 147 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQA---------------VHVLGAD-----G 148 + + LG + G+ + + +LGA Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWAWGIEMLGAKRRNFGN 207 Query: 149 LFLHLNPLQEIIQPNGNT----NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H++ + + Q T + A K+ L ++LK + L + D + Sbjct: 208 IVGHVHGVSDTSQLGAWTAEQFDPALDWGKVEKLMEMWGGKVILKGI---LDAEDARMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + +I N+ + Sbjct: 265 KLGADAIVVSNHGGRQLDGALSSIRMLPEI-----------------VDAVGNDVEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ V AA+E +RKE +M L G + Sbjct: 308 SGIRSGQDVLKALALGAKGTMIGRAFVYGLGAMGQKGVTAALEVIRKELDTTMALCGERS 367 Query: 324 VQELYLNTALI 334 V+ L + LI Sbjct: 368 VEGLGRHNLLI 378 >gi|56707456|ref|YP_169352.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis SCHU S4] gi|89255648|ref|YP_513009.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica LVS] gi|110669927|ref|YP_666484.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis FSC198] gi|115314151|ref|YP_762874.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica OSU18] gi|156501597|ref|YP_001427663.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009910|ref|ZP_02274841.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica FSC200] gi|187932162|ref|YP_001892147.1| L-lactate dehydrogenase [Francisella tularensis subsp. mediasiatica FSC147] gi|224456538|ref|ZP_03665011.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis MA00-2987] gi|254367041|ref|ZP_04983077.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica 257] gi|254370850|ref|ZP_04986855.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|254874295|ref|ZP_05247005.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603948|emb|CAG44936.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis SCHU S4] gi|89143479|emb|CAJ78655.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica LVS] gi|110320260|emb|CAL08319.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis FSC198] gi|115129050|gb|ABI82237.1| L-lactate dehydrogenase (cytochrome) [Francisella tularensis subsp. holarctica OSU18] gi|134252867|gb|EBA51961.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica 257] gi|151569093|gb|EDN34747.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|156252200|gb|ABU60706.1| FMN-dependent dehydrogenase [Francisella tularensis subsp. holarctica FTNF002-00] gi|187713071|gb|ACD31368.1| L-lactate dehydrogenase [Francisella tularensis subsp. mediasiatica FSC147] gi|254840294|gb|EET18730.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158600|gb|ADA77991.1| L-lactate dehydrogenase [Francisella tularensis subsp. tularensis NE061598] Length = 385 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 122/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 15 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 73 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 189 INLSTKVPWCLNMLKTSNRTFGNIVNHAANKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + +G ++ GG S + +I Sbjct: 249 WNGRMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISVLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R G D+LK+ LGA+ G + P + Sbjct: 299 ----------IDAVDRKLEVLIDSGIRTGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFYQEMDKTMAFCGHTNIN 373 >gi|307329288|ref|ZP_07608452.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] gi|306885077|gb|EFN16099.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] Length = 397 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 L A D+P+L+K V L D E + G+ ++ GG R ++ D + Sbjct: 250 FDKLREATDLPVLIKGV---LHPDDAEQAIAHGVSGVVVSNHGGRQLDRSKAALDALPAV 306 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-P 293 AR + G R+G D+ ++ LGA L P+L Sbjct: 307 -----------------ARQVAGRVPVLFDSGTRSGADVAIALGLGADAVLLGRPWLYGL 349 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 A+D +D V + + E ++M + G V++L Sbjct: 350 AIDGADGVRHVLRCVLAELELTMLMSGAATVEDLRH 385 >gi|32487229|emb|CAD91196.1| putative hydroxymandelate oxidase [Nonomuraea sp. ATCC 39727] Length = 366 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 104/344 (30%), Gaps = 57/344 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + N+ FD L+ R L LG + P+ ++ + + Sbjct: 33 REQTLRANRAAFDRVFLVPRVLQ--DVSACSTRATLLGHPATMPVAVAPVA---YHRLVH 87 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKS-------FELRQYAPHTVLI---SN 122 + LA AA V V + + + + LR++A LI + Sbjct: 88 PDGELATARAARDAGVPFTVSTLSSVPVEDVTALGGHVWFQLYCLREHAATLGLIRRAED 147 Query: 123 LGAVQLNYDFGVQK-AHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFADL-------- 171 G L V + + L H+ P L + + Sbjct: 148 AGCRALMLTLDVPWMGRRPRDIRNRFRLPPHVRPVHLTANSGTEAHRGASGGSALAAHTA 207 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 S + L +A +PL++K + L D GI ++ GG Sbjct: 208 MELSAAVDWSYLETLRAASGLPLVVKGI---LHPEDARRAADLGIDGIVVSNHGGRQLDG 264 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D + + + GG+R+G D+LK++ LGAS Sbjct: 265 AVASLDALPGVAE-----------------SVGGRCEIMLDGGVRSGADVLKALALGASG 307 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + P A D V + L E + L G V Sbjct: 308 VLVGRPVIWGLAADGERGVRTVLGLLGAEIEDGLGLAGCGDVAA 351 >gi|329898142|ref|ZP_08272343.1| L-lactate dehydrogenase [gamma proteobacterium IMCC3088] gi|328920897|gb|EGG28330.1| L-lactate dehydrogenase [gamma proteobacterium IMCC3088] Length = 387 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 112/361 (31%), Gaps = 80/361 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N + D L L VD SVE G S P ++ + G M Sbjct: 36 SETTLRANVSAYQDITLKQTVLK--DVSSVDTSVELFGTTYSMPAGLAPI--GMGGMFGA 91 Query: 75 INRNLAIAAE-KTKVAMAVGSQRVMFSDHNAIKS--------FELRQ---YAPHTVLISN 122 A AA + + + + + A S + LR N Sbjct: 92 RGELQAKAASDALNIPFVLSTVAICSLEEVAQVSDKSFWFQLYMLRDRGAVQQMLQRAQN 151 Query: 123 LGAVQLNYDFGVQ---------------------KAHQAVHVLG----ADGLFLHLNP-- 155 +G L + + + A+++ + L P Sbjct: 152 VGVDTLVFTVDLAVLGARYRDKRNGLSGGTSLGGRLRTALNLASKPSWIKSVGLGGKPHT 211 Query: 156 ---LQEIIQPNGNT--NFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L+E + PN + +F I L S L++K + L+ D Sbjct: 212 FGNLEEYV-PNASRPDDFQAWITQQVDSTVTWKDIEWLRSIWPGKLIIKGI---LTEEDA 267 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + ++ G ++ GG +++ ++ SDI + Sbjct: 268 KQAVQVGADGIVVSNHGGRQLDCVDATINVVSDIKS-----------------AVGDATT 310 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLL 319 I GG+R+G DI K+ LGA + ++ A+ + + + E +SM L Sbjct: 311 VILDGGIRSGQDIFKAYALGADFTLIGRSWVYALAAGGQRAITDLLATFKAEIEISMALT 370 Query: 320 G 320 G Sbjct: 371 G 371 >gi|332283630|ref|YP_004415541.1| hypothetical protein PT7_0377 [Pusillimonas sp. T7-7] gi|330427583|gb|AEC18917.1| hypothetical protein PT7_0377 [Pusillimonas sp. T7-7] Length = 386 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 114/370 (30%), Gaps = 77/370 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F R + + +G ++ P+ I+ TG G Sbjct: 36 ESTYRANETDFQKIKFRQRV--AVDISQRSLRSSMVGIDVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTV---LI 120 I A AAE+ + + + + + + F+L R + + Sbjct: 93 EILG--AKAAERFGIPFTLSTMSICSIEDIAKHTSQPFWFQLYVMRDRDFMERLIDRAKA 150 Query: 121 SNLGAVQLNYDFGV---------------------------QKAHQAVHVLGAD-----G 148 +N A+ L D V K V++LG Sbjct: 151 ANCSALVLTLDLQVLGQRHKDIRNGLSTPPKPTLANLINLATKPRWCVNMLGTKRRSFGN 210 Query: 149 LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H + ++ + A + I + L+LK + + D L + Sbjct: 211 IVGHAKGVSDLSSLSSWTAEQFDPALCWADIEWIKKRWGGKLVLKGI---MDPQDAHLAV 267 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +SG ++ GG S I E + Sbjct: 268 ESGADALIVSNHGGRQLDGAPSSISALPAI-----------------THAVGKEIEVWMD 310 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+++++ LGA + FL +A V ++ L E ++M G Sbjct: 311 GGIRSGQDVIRAVALGAKGTMVGRAFLYSLGAMGEAGVYRCLQMLANEMDITMGFCGRTD 370 Query: 324 VQELYLNTAL 333 ++++ + L Sbjct: 371 IRDVDRSILL 380 >gi|114570667|ref|YP_757347.1| (S)-2-hydroxy-acid oxidase [Maricaulis maris MCS10] gi|114341129|gb|ABI66409.1| (S)-2-hydroxy-acid oxidase [Maricaulis maris MCS10] Length = 381 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 23/165 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + A P +K + D + +G I+ GG + D Sbjct: 236 WEDAKWMKEAWGGPFAIKGIAR---PDDALRCVHAGADAVWISNHGGRQLDTAPATIDTL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +DI +A+ I GG+R G DI+K++ LGA+ + P+L Sbjct: 293 ADI-----------------VAAVDGQAEVILDGGIRRGTDIIKALALGATAVAVGRPYL 335 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V A++ L M L+G R+ +L +R Sbjct: 336 FGLGAGGQAGVERALDILVSALERDMALVGATRLSDL--TPDFVR 378 >gi|312137325|ref|YP_004004662.1| glutamate synthase (nadph) gltb2 subunit [Methanothermus fervidus DSM 2088] gi|311225044|gb|ADP77900.1| glutamate synthase (NADPH) GltB2 subunit [Methanothermus fervidus DSM 2088] Length = 499 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 72/392 (18%), Positives = 139/392 (35%), Gaps = 80/392 (20%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-------PSVEFLGK--- 53 RK + + G R FDD ++ ++S +D V + Sbjct: 101 QRKAEEGTYKVRGCGATRKVPTFDDLVIVP---AQVSRPPIDKYREPCNTKVVLGDRYAE 157 Query: 54 ---KLSFPLLISSMTGGNNKMIERIN----RNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 +L P++I++M+ G +I LA A T + +R S I Sbjct: 158 KPLELDTPIMIAAMSFGAISKEAKIALAMGATLAGTATNTGEGGMLPEERKYASK--LIA 215 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNP-LQEIIQP 162 + ++ ++N A+++ G + H + A+ + + P + + P Sbjct: 216 QYASGRFGVSAEYLNNADAIEIKIGQGAKAGMGGHLLGEKVVAEVAEIRMIPEGTDALSP 275 Query: 163 NGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-R 216 + + +S VP+++K +S D+++ K+G + G + Sbjct: 276 ARHMDIVGPEDLSMKISQLREITDWKVPIIVKFTSGRVS-DDVKIAAKAGADIVVVDGMQ 334 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNG 270 GGT D+ GIPT ++ A +E +A+GG+R+G Sbjct: 335 GGT---------GAGPDVVTEHA--GIPTIAAIVEADEALKEINLRDEVSLVAAGGIRSG 383 Query: 271 VDILKSIILGASLG-------------------------GLAS--PFLKPAMDSSDA--- 300 D+ K+I LGA G+A+ P L+ +D + Sbjct: 384 ADVAKAIALGADAVYIGTAALVAIGCRVCQMCHTGKCRKGIATQDPILRRRLDYVEGGKR 443 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 V IE++ +E + G V++L + Sbjct: 444 VARYIEAMTEELKMLTQQAGNTDVRKLEKDDL 475 >gi|126731991|ref|ZP_01747794.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sagittula stellata E-37] gi|126707523|gb|EBA06586.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sagittula stellata E-37] Length = 387 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 107/364 (29%), Gaps = 79/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + N FDD +L R I + +G+ ++ P+ ++ + TG Sbjct: 32 SEQTFRENVSDFDDIYLRQRV--AIDMANRSTKTQMIGQDVAMPVALAPVGLTG-MQNAD 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQYAPHTVLI---- 120 I A AAE V + + + S ++ + L+ L Sbjct: 89 GEI--KAARAAEAFGVPYCLSTMSICSIEDVASHTSKPFWLQVYTLKDNDFMQGLFDRAK 146 Query: 121 -SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNF 168 + A + D ++ A L + + +Q E++Q F Sbjct: 147 EAKCSAAVITVDLQLLGQRHKDLKNGLSAPPKLTPKSVANMMTKVQWGLEMLQTK-RRFF 205 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +I D PL++K + + D Sbjct: 206 GNIVGHAKGVTDPSSLTTWTAESFDQSLNWDRIREFRRMWDGPLIIKGI---IDPRDALE 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG S I + + Sbjct: 263 ACNVGADAIVVSNHGGRQLDGALSSIRALEPI-----------------VDAVGDRIEVH 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G D+LK++ +GA + ++ V A+E + KE SM L G Sbjct: 306 LDSGIRSGQDVLKAVAMGAKGCWIGRAYVYGLGAMGQAGVTKALEVIHKELDTSMALCGH 365 Query: 322 KRVQ 325 + V Sbjct: 366 RNVN 369 >gi|294084340|ref|YP_003551098.1| L-lactate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663913|gb|ADE39014.1| L-lactate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] Length = 378 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 114/370 (30%), Gaps = 77/370 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ D R + + + LG+K++ P+ ++ TG G Sbjct: 33 ESTYRANETDLQDIKFRQRV--ALDVSKRSTEMTMLGEKVTMPVGLAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL----------------RQ 112 I A AA V + + + + A + F+L R Sbjct: 90 EI--LAARAAAAYGVPFTLSTMSICSIEDVAEDTNKPFWFQLYVMRDRDFVSRLIERARD 147 Query: 113 YAPHTVL----ISNLGAVQLNYDFGVQK-----AHQAVHVL---------------GADG 148 ++ + LG + G+ V++ Sbjct: 148 ANCSALMVTLDLQILGQRHKDVYNGLSAPPKLTIRNMVNMATKPRWCLGMLGTKRRDFRN 207 Query: 149 LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H+ ++++ N + + +A + L++K V L + D + + Sbjct: 208 IVGHVKGVEDMSSLSSWTNSQFDPSLSWDDVAAIRKQWGGKLIIKGV---LDAEDAKAAV 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG S I ++A+ Sbjct: 265 NIGADAIVVSNHGGRQLDGAMSAIAALPAI-----------------VDAVGDKAEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+L++I LGA + FL D V +E + KE V+M L G Sbjct: 308 SGIRSGQDVLRAIALGAKATLIGRAFLYGLGARGQDGVRETLEIIHKELDVTMGLCGKSD 367 Query: 324 VQELYLNTAL 333 + + + L Sbjct: 368 LASIDDSILL 377 >gi|290969099|ref|ZP_06560629.1| putative L-lactate dehydrogenase [cytochrome] [Megasphaera genomosp. type_1 str. 28L] gi|290780859|gb|EFD93457.1| putative L-lactate dehydrogenase [cytochrome] [Megasphaera genomosp. type_1 str. 28L] Length = 348 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 21/155 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I + A +P ++K + +S + ++ + +G+ ++ GG + + D+ Sbjct: 199 ESIEAMVKASSLPFIVKGI---MSPQEAQICVDAGVAAIVVSNHGGRALDGMAGTADVLP 255 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I + GG+R+G D+LK + LGA + P Sbjct: 256 EIAA-----------------AVKGQIHIFVDGGVRHGEDVLKMLALGADAVLIGRPLAI 298 Query: 293 PAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ + V +++L +E +M + G + + Sbjct: 299 AAIGGGREGVKIYLKNLYRELCDAMLITGVTDINQ 333 >gi|227504237|ref|ZP_03934286.1| L-lactate dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227199192|gb|EEI79240.1| L-lactate dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 419 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 23/167 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + D +L+K + ++ D ++ G ++ GG R+ + Sbjct: 261 DDLEWIREQWDGKMLVKGI---VNPADARTVIELGADGVVVSSHGGRQLDRVVN------ 311 Query: 233 DIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 T +LE R +A+ + G+ +G DI ++ LGA+ + +L Sbjct: 312 ------------TLRALEAIRAELGPDAEIVYDSGIMSGTDIAIALALGANFVLIGRAYL 359 Query: 292 KPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 M + V IE L E + LLG V++L + + Sbjct: 360 YGLMAGGREGVDRIIELLTSELETACTLLGVSSVRDLKREHVITPWE 406 >gi|169629212|ref|YP_001702861.1| putative L-lactate 2-monooxygenase [Mycobacterium abscessus ATCC 19977] gi|169241179|emb|CAM62207.1| Putative L-lactate 2-monooxygenase [Mycobacterium abscessus] Length = 384 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 117/359 (32%), Gaps = 63/359 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N + L+ R L + + D S FLG+ + P I + G + Sbjct: 49 AGDEHTQDSNVTALRRYGLVPRMLRDRTVR--DMSTSFLGRTFTSPAFICPV-GVLGAVR 105 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI---KSFELRQYAP--HTVLISNLGAVQ 127 +R + A AA + + + + A S+ + Q P + L N Sbjct: 106 DRGDLLTAAAARELDMPAMYSTLSAATLEEVAAARGDSYGIFQLYPSSDSELTDNFIRRA 165 Query: 128 LNYDFGVQKAH--------QAVHVLGADGLFLHLNPLQEIIQ-------------PNGNT 166 + + + LH + L Sbjct: 166 EAAGYDALAVTLDTGTLGWRPRDLKHGYLPMLHGHCLANYTSDPRFLEIAGVRSAGELTP 225 Query: 167 NFADL------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 A L + I S +P++LK + S D+ + G+ + Sbjct: 226 MHAGLVWASLFSHPGLTWADIDHYRSITKLPIILKGI---CDSDDVRQAVDRGVDAIAYS 282 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + G+P L A G+R+G+DIL Sbjct: 283 NHGGRQ------------------ANGGVPAIDGLAAAVEAAGSVPVTFDSGIRDGIDIL 324 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +++ LGASL G+A P++ A+D ++ V I+SL E ++M + + EL + Sbjct: 325 RAVALGASLVGVARPYVYGLALDGTNGVKHVIQSLLAEADLTMAVNCYLSLNELAVQRL 383 >gi|296534826|ref|ZP_06897170.1| L-lactate dehydrogenase (cytochrome) [Roseomonas cervicalis ATCC 49957] gi|296264850|gb|EFH11131.1| L-lactate dehydrogenase (cytochrome) [Roseomonas cervicalis ATCC 49957] Length = 395 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 106/341 (31%), Gaps = 79/341 (23%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQR 96 I + LG+ ++ PL I+ TG G I+ AA+ + + + Sbjct: 54 IDVSGRSTATTMLGEPVAMPLAIAP-TGLTGLFHADGEIHG--CRAAQAFGIPFTLSTMS 110 Query: 97 VMFSDHNAIK-----SFELRQYAPHTV--------LISNLGAVQLNYDFGVQ-------- 135 + + A F+L + + A+ L D +Q Sbjct: 111 ICSIEDVAGAVDKPFWFQLYVMRDRGFARSLVERAIAAKCSALVLTLDLQIQGQRHQDIK 170 Query: 136 ---------KAHQAVH---------------------VLGADGLFLHLNPLQEIIQPNGN 165 + + A G LN L I + Sbjct: 171 NGLAVPPKLTVKNMLDVATKPRWALEVLRGKRKTFGNLTEAPGAKEGLNTLSHWIAGQFD 230 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + +A + S L+LK V L D + ++G ++ GG Sbjct: 231 PSLSW--KDVAWIRSIWPGKLILKGV---LDVDDARIAAETGADALVVSNHGGRQLDGAP 285 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S + I + + GG+R+G D++K++ LGA Sbjct: 286 SSISVLPSIAE-----------------AVGERIEVMFDGGIRSGQDVMKAVALGAKGCM 328 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +L A V A+E +RKE +SM L GTK + Sbjct: 329 IGKSWLYGLAAGGQAGVTTALEIMRKELDISMALTGTKTIA 369 >gi|326773900|ref|ZP_08233182.1| L-lactate dehydrogenase [Actinomyces viscosus C505] gi|326636039|gb|EGE36943.1| L-lactate dehydrogenase [Actinomyces viscosus C505] Length = 422 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 109/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + + R ++ F D L P I VD S E LG + S P I+ Sbjct: 59 AEGEVSLRRARQAFRDIEFHPDILRPAID---VDTSCEILGGRSSMPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEVAGAGAAGAAGIPFTLSTLGTTSIEDVKAANPHGRNWFQLYVMRQREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + V + + F + +++ + +DF Sbjct: 176 AAAGFDTLMFTVDTPVAGARLRDKRNGFSIPPQITAGTVLNAIPRPWWWFDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + E++ + +D + ++ S +++K V + D Sbjct: 230 TPKLEFASLKSTGGTVGELLDNAMDPTISD--EDLKVIRSMWPGKIVIKGVQ---TVEDS 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + + G+ ++ GG R L ++ R +A Sbjct: 285 KRLIDLGVDGVLLSNHGGRQLDRAPVPFRLLPEV-----------------VREVGKDAT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG D++ ++ LGA G + +L M + V IE L E I +M LL Sbjct: 328 IMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREGVDRMIEILSDEVIRTMKLL 387 Query: 320 GTKRVQEL 327 G + EL Sbjct: 388 GVSSLDEL 395 >gi|85706081|ref|ZP_01037176.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. 217] gi|85669245|gb|EAQ24111.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. 217] Length = 370 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 110/360 (30%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G N+ D L R L + + D S++ G P I+ M G N Sbjct: 32 AGEGHGEALNRAALRDLRLKPRVL--CNVTKRDLSLDVFGHPARVPFGITPM-GMCNLST 88 Query: 73 ERINRNLAIAAEKTKVAMAV----------------------------GSQRVMFSDHNA 104 + LA A + +V + V GS + D Sbjct: 89 PGADLMLARLAARDRVPLGVSTVASTPLEQMIEVAEGHAWFQLYFSGDGSGTMALVDRAR 148 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDF-------GVQKAHQAVHVLGADGLFLHLNPL- 156 ++ + +L + F Q A+H + G LH P Sbjct: 149 AAGYQTLVVTLDVPEVGR-RPRELRHGFKMPFKIGPRQFVDFALHPRWSLGTLLHGKPEM 207 Query: 157 ----QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 Q + AD S + L +A L++K V L D +G+ Sbjct: 208 ANFRQGGFDRTASRAAADWSY-LDRLRTAWPGTLVIKGV---LDVEDAVRLRDAGVDAIQ 263 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGV 271 ++ GG P L L R + GLR+G Sbjct: 264 VSSHGGRQLDGAP------------------PPILMLAEIRAALGPDYPLFFDSGLRSGE 305 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DI+K+ +GA+ L P L + + + + +E +++ LG + L+ + Sbjct: 306 DIVKAHAMGANFAFLGRPLLYAMAAGGERGLNRLWDVMTEEISLTLAQLGRTDMSGLFDS 365 >gi|163791711|ref|ZP_02186103.1| L-Lactate oxidase [Carnobacterium sp. AT7] gi|159873023|gb|EDP67135.1| L-Lactate oxidase [Carnobacterium sp. AT7] Length = 390 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 47/338 (13%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIERINR 77 I +N + F+ ++ R L I + D S G +LS P++++ + G + Sbjct: 72 IKQNIESFNHKLIVPRVLKNI--EHPDQSTSIFGVELSTPIIMAPVASHGLANVAAEPAT 129 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAI-----KSFELRQYAPHTVLISNL--------G 124 A AE + F + + + F+ + L Sbjct: 130 AKA-VAESGSIMTISSYANKPFKEISQAGAGAPQWFQFYMSKDDGINRDILDEAKANGVK 188 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------SSKIA 176 A+ L D V +A L + +Q G + A + Sbjct: 189 AIVLTADATVGGNREA-DKRNGFVFPLGMPIVQAYQSGVGQSMDAVYGSSKQTLSPKDVE 247 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 ++S +P+ +K V ++ D + L SG + GG + D + Sbjct: 248 FIASYSGLPVFVKGVQ---TAEDALISLASGAGGIWVTNHGGRQLDGGPAAFDSLQTVAE 304 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAM 295 + + G+R G + K++ GA L + P + A+ Sbjct: 305 -----------------AVDRKVPIVFDSGVRRGQHVFKALASGADLVAIGRPAIYGLAL 347 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S V + + + E + M L GTK V+++ L Sbjct: 348 GGSQGVKSVFDHFKHELELVMQLAGTKTVEDIKNTVLL 385 >gi|116611994|gb|ABK04718.1| L-lactate dehydrogenase (cytochrome) [Arthrobacter sp. FB24] Length = 417 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 114/374 (30%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D L + +D S + LGK P+ I+ TG M Sbjct: 68 AEAEITLRRAREAFLDIEFRPGVL--RNVSSIDLSTDILGKPSRLPVGIAP-TGFTRMMQ 124 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + AAE + + + D + + AP+ L + + D Sbjct: 125 SEGEYAGSQAAEAAGIPYTLSTMGTASIED--------VAEAAPNGRNWFQL-YLWTDRD 175 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------FADLS 172 ++ +A G D L + ++ + N A Sbjct: 176 RSLELIERAAKA-GNDTLMVTVDTAVAGARLRDVRNGMTIPPALTIKTVLDASYRPAWWF 234 Query: 173 S-----------------KIALLSSAMDVPLL-----------LKE---VGCGLSSMDIE 201 + +A L ++M P L K V + D Sbjct: 235 NFLTHEPLTFASLSRYTGTVADLINSMFDPTLTFEDLDWLRETWKGKLVVKGIQTVDDAR 294 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG R L + F ++A Sbjct: 295 KVVDHGADGVVLSNHGGRQLDRAPIPFHLLPGVKEAFT--------------KDNSDAAI 340 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 I G+ +G DI+ ++ GA + +L M A V AI+ L K+ +M LLG Sbjct: 341 ILDTGIMSGADIIAALAQGADFTLIGRAYLYGLMAGGRAGVDRAIQILEKDMTRTMALLG 400 Query: 321 TKRVQELYLNTALI 334 ++ EL + I Sbjct: 401 VSKLSELTPDHVRI 414 >gi|319764083|ref|YP_004128020.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] gi|317118644|gb|ADV01133.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] Length = 383 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 25/177 (14%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 LN + + + I L LLLK + L D + G Sbjct: 221 LNAFKAWVDAQFDPGVTW--KDIEWLRGQWKGRLLLKGI---LDVEDARAAVAVGAEGIV 275 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGV 271 ++ GG + T L +AR +A+ + GG+R GV Sbjct: 276 VSNHGGRQLDSVA------------------STAAKLPAIARAVGAQAEVLVDGGVRGGV 317 Query: 272 DILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D+ K++ LGA + P A V + ++E +++M L G R ++ Sbjct: 318 DVFKALALGARGVLVGRPWVWALAAQGEAGVRTLLAQWQRELLLAMTLAGVPRTADI 374 >gi|259415422|ref|ZP_05739343.1| L-lactate dehydrogenase (cytochrome) [Silicibacter sp. TrichCH4B] gi|259348652|gb|EEW60414.1| L-lactate dehydrogenase (cytochrome) [Silicibacter sp. TrichCH4B] Length = 387 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 113/369 (30%), Gaps = 73/369 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N FD L R + + + +G+ ++ P+ ++ + G Sbjct: 33 EQTFRENTTDFDQIRLRQRV--AVDMAGRSTAAQMIGQNVAMPVALAPV-GLTGMQCADG 89 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI-----SN 122 A AAE V + + + + A + + ++ LI +N Sbjct: 90 EIKAARAAEAFGVPFTLSTMSINSIEEVAEATSKPFWFQLYTMKDEDYVRRLIERAKAAN 149 Query: 123 LGAVQLNYDF--------GVQKAHQAVHVLGADGLF---------------LHLNPLQEI 159 A+ + D ++ A L + N + Sbjct: 150 CSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWAWGIEMLGAKRRNFGNIV 209 Query: 160 IQPNGNTNFADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 G ++ + L KI L ++LK + L D ++ K Sbjct: 210 GHVEGISDASSLGAWTAEQFDPSLDWGKIEKLKEMWGGKVILKGI---LDEEDAKMAAKV 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + I ++ + G Sbjct: 267 GADAITVSNHGGRQLDGALSSIRMLPRIMD-----------------AVGDQVEVHLDSG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ LGA+ + F+ V A+E + KE SM L G K V Sbjct: 310 IRSGQDVLKALALGATGTMIGRAFVYGLGAMGQKGVTRALEVIHKELDTSMALCGEKNVA 369 Query: 326 ELYLNTALI 334 L + L+ Sbjct: 370 NLGRHNLLV 378 >gi|319440608|ref|ZP_07989764.1| L-lactate dehydrogenase [Corynebacterium variabile DSM 44702] Length = 422 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 105/362 (29%), Gaps = 72/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R + + D L + D S E G ++S P+ ++ TG M Sbjct: 68 AENEISLHRARMAYRDLEFNPGVL--RDVTDADLSTEIFGTEISMPVGLAP-TGFTRMMQ 124 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSD-----HNAIKSFEL-----RQYAPHTVLIS 121 + AA + + + D + F+L R+ + V + Sbjct: 125 TEGEYAGSAAAADKGIPFCLSTMGTASLEDVATHAPDGDNWFQLYLWKDREASKDLVQRA 184 Query: 122 ------NLG---------------------AVQLNYDFGVQKAHQ--------AVHVLGA 146 NL QL + + +++ L Sbjct: 185 WAAGYRNLIVTVDTAIAGARLRDTRNGFSIPPQLTWKTVLDASYRPAWWFNFLTTEQLSF 244 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 L + E++ N + A I + L+ K + + D L Sbjct: 245 ASLSRSSGTVAELV--NRMFDPALTFEDIDWIRDMWPGNLIAKGLQ---TVDDSRRVLDH 299 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L ++ + + G Sbjct: 300 GADGIILSNHGGRQLDRAPVPLHLLPEVREALGE-----------------DVTIGVDTG 342 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +G DI+ ++ LGA + ++ M V ++ L ++ +M L G + Sbjct: 343 IMDGADIIAAVALGADFTLVGRAYMYGLMAGGQRGVARMLDILEEQATRTMRLCGVNSID 402 Query: 326 EL 327 EL Sbjct: 403 EL 404 >gi|312138931|ref|YP_004006267.1| l-lactate 2-monooxygenase [Rhodococcus equi 103S] gi|311888270|emb|CBH47582.1| putative L-lactate 2-monooxygenase [Rhodococcus equi 103S] Length = 387 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 120/361 (33%), Gaps = 74/361 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN + F+ W L+ R L + + D +VE G + P+ ++ + G + Sbjct: 49 AGDETTQRRNVEAFEQWGLLPRML--VGAETPDLTVEAWGHTFASPVFMAPV--GVIGLC 104 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +R +R+ IA + V + + + +A L N D Sbjct: 105 DR-DRHGDIAVAQASAQTGVPAMFSTLMEDPLED---VVPHAGDVPSFFQLYTP-KNRDL 159 Query: 133 GVQKAHQAVHVLGADGLFLHLNP-------------------LQEIIQPNGNTNFADL-- 171 +A G G+ + L+ Q + + F DL Sbjct: 160 AESFVKRA-EAAGYRGITVTLDTWVPGWRPRDLSTGNFPQLRGQVLKNYTSDPVFRDLVG 218 Query: 172 --------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + L S +P++LK + D + +G+ Sbjct: 219 SDDPQLTVLHWVQTFGNSLTWADLDWLRSLTTLPIVLKGISH---PEDARRAIDAGVDGI 275 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNG 270 + GG + GI +L C++ + G+R+G Sbjct: 276 YCSNHGGRQ------------------ANGGIAALETLPAVVEACDDRVPVLFDSGVRSG 317 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D++K++ LGA++ G+ P++ AM +V + L E + M + G V + Sbjct: 318 SDVVKALGLGATMVGIGRPYVYGLAMGGVPGLVHVLRMLLAEAELLMGVNGYPDVAAVRE 377 Query: 330 N 330 N Sbjct: 378 N 378 >gi|124002546|ref|ZP_01687399.1| isopentenyl-diphosphate delta-isomerase II 2 [Microscilla marina ATCC 23134] gi|123992375|gb|EAY31743.1| isopentenyl-diphosphate delta-isomerase II 2 [Microscilla marina ATCC 23134] Length = 427 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +PLLLK + L D + + G+ ++ GG Sbjct: 278 WENLQFLRKHTQLPLLLKGI---LHPDDAQKAIDYGMDGIVVSNHGGRQVDGAIGSFAAL 334 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI + ++ + G+R+G D+LK++ +GA + P++ Sbjct: 335 PDI-----------------VQKVKDQIPVLLDSGVRSGADMLKALAIGAKAVCVGRPYV 377 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V + +L +F ++M L G K V EL Sbjct: 378 YGLALAGAAGVQEVLANLMADFELNMALAGCKSVGEL 414 Score = 45.2 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD + ++ R L + D S+ G+K PLL + + G + Sbjct: 51 AGLGKTMQNNRSAFDQYQIVPRMLK--DVSKRDTSITLFGQKFPSPLLTAPV-GVLEMVH 107 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM 98 +R + +A A V M +Q Sbjct: 108 KRADLAVAEATSSLGVPMIFSNQASY 133 >gi|317146218|ref|XP_001821371.2| L-lactate dehydrogenase [Aspergillus oryzae RIB40] Length = 420 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 109/366 (29%), Gaps = 89/366 (24%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-L 79 N++ F +I R L + + D + E G +S P+ + + G NK+ + Sbjct: 71 ANRQAFFRHRIIPRQLVDTNLR--DTTTEIFGHHVSAPIGFAPI--GINKIYHPSAEAAV 126 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A + + + + + ++ + L + + + ++ Sbjct: 127 AKVAGELNLPYCLSTAGSTPIE-------KVAEANGQGPRFYQLYMPH-DDELTLSLLNR 178 Query: 140 AVHVLGADGLFLHLNPLQ------------------------------------EIIQPN 163 A G D L L + Q E I P Sbjct: 179 AWKS-GFDALILTTDTWQLGWRHDDVANSNYAFYRGTGADLGLTDPVFQKRCREEGIDPE 237 Query: 164 GNTNFA-------------DLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLK 205 + A KI L P +K + S D + ++ Sbjct: 238 KDIVAASAKWIDSVWHGRAWSWEKIPWLIEQWKKISGGRPFAIKGIQ---SVADAKKCVE 294 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ G + D +I A ++ + Sbjct: 295 YGVDGIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMYDS 337 Query: 266 GLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R D+ K++ LGA + ++ + V ++SL +F + M + G V Sbjct: 338 GVRGASDVAKALALGARFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDIFMCVAGFNSV 397 Query: 325 QELYLN 330 +EL + Sbjct: 398 KELDRS 403 >gi|256393549|ref|YP_003115113.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] gi|256359775|gb|ACU73272.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] Length = 387 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 22/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S +PL++K + D+ G+ + GG Sbjct: 243 WDDLPWLRSLTTLPLIVKGLCH---PEDVRRARDGGVDGIYCSNHGGRQ----------- 288 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+ T L + I G+R+G D++K++ LGAS + P++ Sbjct: 289 -------ANGGLATLDVLPEVVEAADSLPVIFDSGVRSGTDVVKALALGASAVAIGRPYI 341 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ D +V + SL E + M + G + +L Sbjct: 342 HGLAIGGVDGLVHVLRSLLAEADLLMAVDGYPTLADL 378 >gi|89069016|ref|ZP_01156397.1| Lactate dehydrogenase [Oceanicola granulosus HTCC2516] gi|89045385|gb|EAR51450.1| Lactate dehydrogenase [Oceanicola granulosus HTCC2516] Length = 389 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 107/369 (28%), Gaps = 89/369 (24%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L + + +G++++ P+ ++ + TG + E Sbjct: 33 EQTFRENTTDFEKIRLRQKV--AVDMSNRSTRTTMIGEEVAMPIALAPVGLTGMQSADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNLGAVQL 128 A AAE V + + + + A + F+L + + +G + Sbjct: 91 I---KAARAAEAFGVPFTLSTMSICSIEDVAEHTSKPFWFQLYVMRDEDFVDNVIGRAK- 146 Query: 129 NYDFGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNG----------------------- 164 V L L H + + + P Sbjct: 147 -----AAGCSALVLTLDLQILGQRHKDLVNGLSAPPRPTPRTLLDLSTRWRWGLEMLGTK 201 Query: 165 NTNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSM 198 F ++ +KI + L+LK + L Sbjct: 202 RRTFRNIVGHAKNVGNVQSLMSWTAEQFDPQLDWAKIRRIKEKWGGKLILKGI---LDEE 258 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + G ++ GG S + I R ++ Sbjct: 259 DARKAVDVGADAIVVSNHGGRQLDGALSSIRMLPPI-----------------LRAVGDQ 301 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMF 317 + GG+R+G D LK++ LGA + ++ V A+E L KE VSM Sbjct: 302 IEVHMDGGIRSGQDALKAVALGAKGTYIGRAYIYGLGAMGQAGVTRALEVLHKELDVSMA 361 Query: 318 LLGTKRVQE 326 G + + + Sbjct: 362 FCGRRDIND 370 >gi|76803190|ref|YP_331285.1| isopentenyl-diphosphate delta-isomerase II 2 [Natronomonas pharaonis DSM 2160] gi|76559055|emb|CAI50653.1| isopentenyl-diphosphate delta-isomerase II 2 [Natronomonas pharaonis DSM 2160] Length = 396 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 133/361 (36%), Gaps = 76/361 (21%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 R ++ F +W ++ R L ++ D S E LG+ + +P +++ + G + E A Sbjct: 60 RTEQDFSEWRIVPRMLRG--VEDRDLSTEVLGQTVDYPAMVTPL-GVQTLVDEEGELATA 116 Query: 81 IAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFELR-QYAPHTVL 119 A ++ V + S Q +D + +SF R + A + + Sbjct: 117 RACDELHVPFILSSLSSTPMEEVAEALGDTPKWFQFYWSADEDIARSFLTRAEEAGYDAI 176 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHV-----LGADGLFLHLN----------PLQEIIQPNG 164 + + A L + + + L +G+ + + P +E Q Sbjct: 177 VVTVDAPTLGWR------ERLIDRGYYPFLEGEGVANYFSDPEFRSQLEAPPEEEPQAAV 230 Query: 165 NT------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + + D+P+L+K V L D +L ++ G ++ GG Sbjct: 231 DHFLDIFGDASLTWDDLEFVFEHTDLPVLIKGV---LHPEDAKLAVEHGADGVGVSTHGG 287 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSI 277 I +L ++ ++ G+R G DI K++ Sbjct: 288 RQVDGS------------------ITALEALPDIVDAVGDDVTVTFDSGIRRGADIYKAL 329 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA + PF+ A+ D V +E+L +F ++M L G +L T +RH Sbjct: 330 ALGADACLIGRPFIYGLALGGQDGVEHVLENLIADFDLTMGLAGRDAATDLDRET--LRH 387 Query: 337 Q 337 + Sbjct: 388 E 388 >gi|293605307|ref|ZP_06687693.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292816363|gb|EFF75458.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 399 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 110/370 (29%), Gaps = 76/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 V N++ + + R L + + LG+ + P+ ++ M G Sbjct: 34 VEDGQSERGNRQAYAQYAFRPRVL--VDVSQRSTRTTVLGRDYAAPVGVAPM-GIAALSS 90 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSFELRQYAPHTVLISNL-----G 124 R + LA AA V + GS + + A ++ I+ L G Sbjct: 91 YRGDIVLARAAADADVPCIMSGSSLIRLEEVMQAAPGTWFQAYLPGDESQIAALIDRVAG 150 Query: 125 AVQLNYDFGVQKAHQAVHVLGADG------------------------------LFLHLN 154 A V A L+ H Sbjct: 151 AGVTTLVLTVDTPVAANRENNVRAGFSTPLRPSLGLAWQGLTHPRWLFGTFLRTLWRHGM 210 Query: 155 PLQE---------IIQPNGNTNFADL----SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+D S +A + +++K + L D Sbjct: 211 PHFENNYATRGAPILSANVLRDFSDRGHLNWSHVAAIRRRWKGQMVIKGI---LHPDDAR 267 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G+ ++ GG + L+L Sbjct: 268 MARAQGMDGVIVSNHGGRQLDGS------------------VSPLLALPDVVQAAGGMDV 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G D+LK++ LGA + PF A + V A+ + +E +M +LG Sbjct: 310 MLDSGVRRGSDVLKALALGARCVFVGRPFNYAATVAGQRGVARALSLIVEEVRRNMGMLG 369 Query: 321 TKRVQELYLN 330 + ++ + Sbjct: 370 VVTLSQMTED 379 >gi|304570654|ref|YP_832818.2| L-lactate dehydrogenase (cytochrome) [Arthrobacter sp. FB24] Length = 459 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 114/374 (30%), Gaps = 79/374 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D L + +D S + LGK P+ I+ TG M Sbjct: 110 AEAEITLRRAREAFLDIEFRPGVL--RNVSSIDLSTDILGKPSRLPVGIAP-TGFTRMMQ 166 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + AAE + + + D + + AP+ L + + D Sbjct: 167 SEGEYAGSQAAEAAGIPYTLSTMGTASIED--------VAEAAPNGRNWFQL-YLWTDRD 217 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-------------------FADLS 172 ++ +A G D L + ++ + N A Sbjct: 218 RSLELIERAAKA-GNDTLMVTVDTAVAGARLRDVRNGMTIPPALTIKTVLDASYRPAWWF 276 Query: 173 S-----------------KIALLSSAMDVPLL-----------LKE---VGCGLSSMDIE 201 + +A L ++M P L K V + D Sbjct: 277 NFLTHEPLTFASLSRYTGTVADLINSMFDPTLTFEDLDWLRETWKGKLVVKGIQTVDDAR 336 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG R L + F ++A Sbjct: 337 KVVDHGADGVVLSNHGGRQLDRAPIPFHLLPGVKEAFT--------------KDNSDAAI 382 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 I G+ +G DI+ ++ GA + +L M A V AI+ L K+ +M LLG Sbjct: 383 ILDTGIMSGADIIAALAQGADFTLIGRAYLYGLMAGGRAGVDRAIQILEKDMTRTMALLG 442 Query: 321 TKRVQELYLNTALI 334 ++ EL + I Sbjct: 443 VSKLSELTPDHVRI 456 >gi|302526433|ref|ZP_07278775.1| L-lactate oxidase [Streptomyces sp. AA4] gi|302435328|gb|EFL07144.1| L-lactate oxidase [Streptomyces sp. AA4] Length = 390 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ L D P LLK V + + +G+ ++ GG + + Sbjct: 237 WEDVSWLRKQWDGPFLLKGV---YRVDEARRAVDAGVSAISVSNHGGNNLDGTPATIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + N+ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVAE-----------------AVGNDVEVLLDGGIRRGSDVVKALALGARAVLIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG + V +L + +I Sbjct: 337 WGLAAGGQAGVENVLDVLRNGIDSTLLALGHRSVHDLSRDDLII 380 Score = 36.4 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 19 IDRNKKFFDDWHLIHRA--LPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 + N +D+ R LP E D S LG+ ++ P+LIS TG Sbjct: 38 LQDNLAAYDELRFAPRTAGLPG----ERDLSTNVLGRDVALPVLISP-TG 82 >gi|115386656|ref|XP_001209869.1| hypothetical protein ATEG_07183 [Aspergillus terreus NIH2624] gi|114190867|gb|EAU32567.1| hypothetical protein ATEG_07183 [Aspergillus terreus NIH2624] Length = 403 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 113/365 (30%), Gaps = 83/365 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +D N+ F W LI R L I D + SV G++ PLL++ + G + Sbjct: 52 AGEKATMDSNRLAFRQWKLIPRMLKRI--DNQNLSVNLFGQEYPTPLLMAPV-GVQSLFH 108 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E LA A + + + + ++ + L Q N D Sbjct: 109 EDKETGLAEACADVGIPYILSTASSSTIE-------QVAEANGDGKRWYQLYWPQSN-DV 160 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF------------------------ 168 +A G L + L+ +P N Sbjct: 161 TASLLKRAKEN-GYSVLVVTLDTWSLAWRPADLDNAYVPFIKGVGNQIGFSDPVFRAKFE 219 Query: 169 --------------------------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + ++A L D P++LK + D +L Sbjct: 220 KEAGCKVEEDIVAASRAWISDAFPGRSHSWEELAFLRKNWDGPIVLKGIQH---VEDAKL 276 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 LK+G ++ GG ++ +I ++ + Sbjct: 277 ALKAGCDGIVVSNHGGRQVDGAIGSLEVLPEI-----------------VEAVGDKMTVL 319 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R G D++K++ LGA + P + A+D + A ++ L + SM L G Sbjct: 320 FDSGIRTGADVIKALCLGAKAVLVGRPVVYGLAIDGKNGAKAVMKGLLADIWQSMGLSGI 379 Query: 322 KRVQE 326 + E Sbjct: 380 DGIAE 384 >gi|293571048|ref|ZP_06682090.1| L-Lactate oxidase [Enterococcus faecium E980] gi|291608888|gb|EFF38168.1| L-Lactate oxidase [Enterococcus faecium E980] Length = 367 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 106/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHQLIIPHVLRDVEL--PDTTTHFDEETLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDDGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS------ 172 A+ L D V ++ L + +Q G T A Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 173 --SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDIEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGSAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSIGVRQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|239927106|ref|ZP_04684059.1| L-lactate 2-monooxygenase [Streptomyces ghanaensis ATCC 14672] gi|291435453|ref|ZP_06574843.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] gi|291338348|gb|EFE65304.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672] Length = 389 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 114/345 (33%), Gaps = 60/345 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N+ + ++ R L ++ D SVE LG+ L PL ++ + G + M Sbjct: 51 AGDGSTARANRAALERRRIVPRMLRDVHAR--DLSVEVLGRTLPAPLALAPV-GVLSIMH 107 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF--------------------SDHNAIKSFELRQ 112 A AA V + S D +SF R Sbjct: 108 PDAESAAARAAAAQGVPFVLSSASSTPMEQVAEAMGDAERWFQLYWPKDPEVARSFLNRA 167 Query: 113 YAP---------HTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGLF--LHLNPLQ 157 T L+S +L L + GV A+ GL +H +P Sbjct: 168 KTAGFTVLVVTLDTPLLSWRPRDLDQAYLPFLHGVGTANYFSDPAFRAGLAKPVHEDPNA 227 Query: 158 EIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 ++ G + A +A L D P++LK V L D L +G+ ++ Sbjct: 228 AVMHFVGMFADPAKTWPDLAFLRENWDGPIVLKGV---LHPDDARLAADAGMDGVVVSNH 284 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + + D + AR + + G+R G D+ K+ Sbjct: 285 GGRQVAGSIAAADALPRV-----------------ARAVGDRLTVLFDSGVRTGDDVFKA 327 Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + LGA L P++ +D V I L E +++ L G Sbjct: 328 LALGARAVLLGRPYVYGLGLDGQAGVEHVIRCLLAELDLTLALSG 372 >gi|91782463|ref|YP_557669.1| L-lactate dehydrogenase (cytochrome) [Burkholderia xenovorans LB400] gi|91686417|gb|ABE29617.1| L-lactate dehydrogenase (cytochrome) [Burkholderia xenovorans LB400] Length = 406 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 102/363 (28%), Gaps = 77/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ R + + + + LG S PL ++ TG G Sbjct: 34 ESTYRANETDLGSLRFRQRV--GCNVEAIRTASTLLGHACSLPLALAP-TGLAGMVHADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF------------------ELRQ 112 I A AA + V + + + D + F R Sbjct: 91 EILA--ARAAARFGVPFTLSTVSICSIEDVAEQVAQPFWFQLYMMKDRDFIVRLIERARD 148 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTN---- 167 ++++ +Q V+ L L L+ P Sbjct: 149 AGCSALVLTLDLPIQGQRHKDVRNGLSVPPKLNVRNLSTMLSRPAWCARMLGTRRRTFGN 208 Query: 168 -------------FADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 FA+ S+ + + L++K + L + D L + Sbjct: 209 IVGHAKGVSDTFAFAEWVSRQFDRSVTWDDVRWIKRHWGGRLIVKGI---LDADDARLAV 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S I + + + Sbjct: 266 AAGADAIVVSNHGGRQLDGAPSSISALPAIAA-----------------AVGRQTEVLMD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+L+++ GA + FL V +E ++KE +M L G Sbjct: 309 GGIRSGQDVLRALAWGAHGVMIGRAFLYGLGALGEAGVTRTLELIQKELESTMALCGITD 368 Query: 324 VQE 326 V + Sbjct: 369 VAD 371 >gi|99080060|ref|YP_612214.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] gi|99036340|gb|ABF62952.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] Length = 387 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 117/369 (31%), Gaps = 73/369 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N FD L R + + + +G+ ++ P+ ++ + G Sbjct: 33 EQTFRENSTDFDQIRLRQRV--AVDMAGRSTASQMIGQDVAMPVALAPV-GLTGMQCADG 89 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL----------------RQYA 114 A AAE V + + + + + + F+L + Sbjct: 90 EIKAARAAEAFGVPFTLSTMSINSIEEVSEATSKPFWFQLYTMKDDDYIRRLIARAKDAN 149 Query: 115 PHTVLIS----NLGAVQLNYDFGVQKAHQA---------------VHVLGAD-----GLF 150 ++I+ LG + G+ + + +LGA + Sbjct: 150 CSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWAWGIEMLGAKRRNFGNIV 209 Query: 151 LHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 H+ + + + + KI L ++LK + L D ++ K Sbjct: 210 GHVEGVSDASSLGSWTAEQFDPSLDWGKIEKLKEMWGGKVILKGI---LDEEDAKMAAKV 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + I ++ + G Sbjct: 267 GADAITVSNHGGRQLDGALSSIRMLPRIMD-----------------AVGDQVEVHLDSG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ LGA+ + F+ V A+E + KE SM L G K V Sbjct: 310 IRSGQDVLKALALGATGTMIGRAFVYGLGAMGQKGVTRALEVIHKELDTSMALCGEKHVT 369 Query: 326 ELYLNTALI 334 +L + L+ Sbjct: 370 DLGRHNLLV 378 >gi|329941678|ref|ZP_08290943.1| glycolate oxidase [Streptomyces griseoaurantiacus M045] gi|329299395|gb|EGG43295.1| glycolate oxidase [Streptomyces griseoaurantiacus M045] Length = 356 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 21/166 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L +P+L+K V L D ++ G ++ GG + + D Sbjct: 208 WAHLAELVRGTALPVLVKGV---LHPDDARQAVEHGAAGIIVSNHGGRQSDAVPAAVDCL 264 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 + + GG+R G D+ ++ LGA GL P Sbjct: 265 PAL-----------------VDAVAGRVPVLLDGGVRRGSDVAVALALGARAVGLGRPVV 307 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A + V + +LR E+ ++ L G +R +L + + + Sbjct: 308 WGLAAEGEAGVRRVLATLRDEYDHTLALCGGRRNADLTADMVVAKG 353 >gi|320533460|ref|ZP_08034137.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134318|gb|EFW26589.1| putative L-lactate dehydrogenase [Actinomyces sp. oral taxon 171 str. F0337] Length = 422 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 109/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + + R ++ F D L P + VD S E LG + + P I+ Sbjct: 59 AEGEVSLRRARQAFRDIEFHPDILRPAVD---VDTSCEILGGRSAMPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEVAGAGAAGAAGIPFTLSTLGTTSIEDVKAANPHGRNWFQLYVMRQREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + V + + F + ++ + YDF Sbjct: 176 AAAGFDTLMFTVDTPVAGARLRDKRNGFSIPPQITAGTVLDAIPRPWWWYDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + E++ + +D + ++ S +++K V + D Sbjct: 230 TPKLEFASLKSTGGTVGELLDSAMDPTISD--EDLKVIRSMWSGKIVIKGVQ---TVADS 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + + G+ ++ GG R L ++ R +A Sbjct: 285 KRLIDLGVDGVLLSNHGGRQLDRAPVPFRLLPEV-----------------VREVGKDAT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG D++ +I LGA G + +L M + V IE L E + +M LL Sbjct: 328 IMVDTGIMNGADVVAAIALGAKFGLVGRAYLYGLMAGGREGVDRMIEILSDEVVRTMKLL 387 Query: 320 GTKRVQEL 327 G ++EL Sbjct: 388 GVSSLEEL 395 >gi|326384859|ref|ZP_08206534.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326196378|gb|EGD53577.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 405 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L D ++K V D + G ++ GG + + Sbjct: 252 WEDLQWLREQWDGEFMVKGVTRI---DDARRAVDIGATAISVSNHGGNNLDGTPGTIRVL 308 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I NE + GG+R G D++K++ LGA + +L Sbjct: 309 GPIAD-----------------AVGNEVDVLLDGGIRRGSDVVKALALGAKAVMIGRAYL 351 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ L+ +M LG + +L +I Sbjct: 352 WGLAANGQTGVENVLDLLQMGIDSAMMGLGKSDIADLSRADLII 395 >gi|253574232|ref|ZP_04851574.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846709|gb|EES74715.1| isopentenyl-diphosphate delta-isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 92 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 45/92 (48%) Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 + R +A I SGGL GVD K++ LGA L G L+PA+ S + + A + Sbjct: 1 AECIREVRAAVPDAALIGSGGLNTGVDAAKALALGADLAGFGRALLEPAVQSEEQLDALL 60 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 E + E +MF +G + L + L+R + Sbjct: 61 ERVELELRTAMFGIGAGSIPALRNTSRLVRRE 92 >gi|317407570|gb|EFV87518.1| L-lactate dehydrogenase [Achromobacter xylosoxidans C54] Length = 385 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 63/370 (17%), Positives = 110/370 (29%), Gaps = 76/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 V N++ +DD+ + L + LG++ + P+ ++ M G Sbjct: 34 VEDGQSERGNRRAYDDYGFRPKVL--VDVSRRGTRCTVLGREYAAPVGVAPM-GIAALTS 90 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSFELRQYAPHTVLISNL------ 123 R + LA AA + V + GS + A ++ I+ L Sbjct: 91 YRGDVMLARAAAEAGVPCIMSGSSLIRLETVMEAAPGTWFQAYLPGDGAQIAALIDRVAA 150 Query: 124 -GAVQLNYDFGVQKAHQAVHVLGA----------------------------DGLFLHLN 154 G L A + + A L H Sbjct: 151 AGVDTLVLTVDTPVAANRENNVRAGFSTPLRPSVGLAWQGVTHPRWLIGTFLRTLVRHGM 210 Query: 155 PLQE---------IIQPNGNTNFADL----SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+D +A + ++LK + L D Sbjct: 211 PHFENNYATRGAPILSGNVLRDFSDRGHLNWQHVAAIRKTWRGRMVLKGI---LHPDDAR 267 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ ++ GG + +L Sbjct: 268 AARAHGMDAVIVSNHGGRQLDGS------------------VSPLHALPAIVDAAGGMDV 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G D LK++ LGA + PF A + V AI + +E +M LLG Sbjct: 310 MLDSGVRRGTDALKAMALGARCVFVGRPFNYAATVAGQRGVAHAIALIVEEIRRNMGLLG 369 Query: 321 TKRVQELYLN 330 ++E+ + Sbjct: 370 IVDLREVNQS 379 >gi|296159633|ref|ZP_06842456.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. Ch1-1] gi|295890077|gb|EFG69872.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. Ch1-1] Length = 406 Score = 98.8 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 102/363 (28%), Gaps = 77/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ R + + + + LG S PL ++ TG G Sbjct: 34 ESTYRANETDLGSLRFRQRV--GCNVEAIRTASTLLGHACSLPLALAP-TGLAGMVHADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF------------------ELRQ 112 I A AA + V + + + D + F R Sbjct: 91 EILA--ARAAARFGVPFTLSTVSICSIEDVAEQVAQPFWFQLYMMKDRDFIVRLIERARD 148 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTN---- 167 ++++ +Q V+ L L L+ P Sbjct: 149 AGCSALVLTLDLPIQGQRHKDVRNGLSVPPKLNVRNLSTMLSRPAWCARMLGTRRRTFGN 208 Query: 168 -------------FADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 FA+ S+ + + L++K + L + D L + Sbjct: 209 IVGHAKGVSDTFAFAEWVSRQFDRSVTWDDVRWIKRHWGGRLIVKGI---LDADDARLAV 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S I + + + Sbjct: 266 AAGADAIVVSNHGGRQLDGAPSSISALPAIAA-----------------AVGRQTEVLMD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+L+++ GA + FL V +E ++KE +M L G Sbjct: 309 GGIRSGQDVLRALAWGAHGVMIGRAFLYGLGALGEAGVTRTLELIQKELESTMALCGITD 368 Query: 324 VQE 326 V + Sbjct: 369 VAD 371 >gi|109898590|ref|YP_661845.1| (S)-2-hydroxy-acid oxidase [Pseudoalteromonas atlantica T6c] gi|109700871|gb|ABG40791.1| (S)-2-hydroxy-acid oxidase [Pseudoalteromonas atlantica T6c] Length = 369 Score = 98.8 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 63/352 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF-LGK-KLSFPLLISSMTGGNNK 70 D ++RN+ FD + R L + S + E LG+ + S+P+LI+ + + Sbjct: 44 AGDDITLNRNRTAFDAIGMNKRVLRKFSKG----TTEIALGRDRFSWPMLIAPLA---YQ 96 Query: 71 MIERINRNLA--IAAEKTKVAMAV-----------------GSQRVMFSDHNAIKSFELR 111 + LA AA + M G ++ + + +L Sbjct: 97 SLLHPQGELATVEAANAVNMGMLTSTLSTFPLEQISAAQHTGKWFQLYMQPDPEHTLDLV 156 Query: 112 QYAP-----------HTVLISNLGAVQLNYDFGVQKAHQAVHVLG-ADGLFLHLNPLQEI 159 + A + L Q F + + A +++ L+P Q + Sbjct: 157 RRAEKAGYTSIVVTVDAPVSG-LRNRQQRAGFSLPPSVVAANLVNYPTSKAQSLSPGQSV 215 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + D I L + +P+ +K + D L ++SG ++ GG Sbjct: 216 LLNGLMADAPDWDD-IQWLRTNTHLPVWIKGISH---PQDALLAVESGCAGIVVSNHGGR 271 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + DL +P S + G+R G DI K+I L Sbjct: 272 TLDGLAPSIDL------------LPPVRS-----AVGEAFPILLDSGIRRGTDIFKAIAL 314 Query: 280 GASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 GA+ + P L A+ + V ++ L++E ++M L G + + ++ L+ Sbjct: 315 GANGVLIGRPVLNGLAVAGALGVAHSLTLLQQELELAMALTGCETISDITLD 366 >gi|294084310|ref|YP_003551068.1| L-lactate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663883|gb|ADE38984.1| L-lactate dehydrogenase, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 383 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 117/369 (31%), Gaps = 80/369 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--KMI 72 D D N+ F D L + L + D S GK P ++ + + Sbjct: 35 HDTTRDENRAFLDSIQLTPQFLRG--RIDADISTTLFGKTYKAPFGVAPIGLASLIWPGA 92 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 E+I L AA++ +A S + + + F+L R+ + + Sbjct: 93 EQI---LGAAAKRNGFPYALSTVASDSVERVSEVADDMTWFQLYAPRNRELMKDLLSRAR 149 Query: 123 ---LGAVQLNYDFGVQKAHQAVHVLGA------DGLFLHLNPLQEIIQPN--------GN 165 + + L D + + + GA + F Q +++P G Sbjct: 150 ACGVKNIVLTADVPSPSRRERMRIAGAPLGSRGNSSFSPQVVWQSMMRPEWAIRTLLNGG 209 Query: 166 TNFADL-------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 F ++ +A + + + L+LK + G D Sbjct: 210 ARFRNMEPYAKNDGAMGITKFIGEQLNGSLDWDYLADIRAEWEGKLILKGILHG---QDA 266 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +K G+ I+ GG + GI ++ Sbjct: 267 ARAVKMGVDALVISNHGGRQLDAAPQPLAQLA---------GIRAV--------VGDDIP 309 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 I G+++G+D+++++ +GA + F+ A A + L +E M L Sbjct: 310 LIVDSGIQSGLDVVRALAMGADFVMIGRAFMYAVAALGKKGGDHAADILLEEVRDVMAQL 369 Query: 320 GTKRVQELY 328 G + + ++ Sbjct: 370 GLQTIADVK 378 >gi|227872824|ref|ZP_03991137.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Oribacterium sinus F0268] gi|227841330|gb|EEJ51647.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Oribacterium sinus F0268] Length = 315 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 114/328 (34%), Gaps = 61/328 (18%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N+ + D H+ R I EV E GKK + P+++ + + Sbjct: 22 AEDANRYNRAYLDRIHVEMRV---IDSTEVSLEKEIFGKKYASPIMMPAFS--------H 70 Query: 75 INRNL----------AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL----I 120 +N+ L A AA++ VG D+ ++ P TV Sbjct: 71 LNKVLENGRTPMEEYASAAKELNALNWVG-----MEDNEDYG--KIVAQNPDTVRIIKPF 123 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE--IIQPNGNTNFADLSSKIALL 178 ++ G ++ D+ V+ AV + D H+ P + +G S +A Sbjct: 124 ADHGRIREEIDYAVEHGSVAVG-IDID----HV-PGTDGFYDVVDGIPMGPVFSKDLADF 177 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + +P + K V LS D ++G ++ G + + I Sbjct: 178 VAYAKLPFVAKGV---LSVQDALKAKEAGCAAIVVSHHHGR-LPFGIAPLQILPKIKEAL 233 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 QD ++ Q + G D K++ LGA + L+P + Sbjct: 234 QD----------------SKMQIFVDCSMDTGYDAYKALALGADAVSVGRGILQPLLSHG 277 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 ++ V++ +E++++E M G K Sbjct: 278 AEGVISKVENMQEELREMMMYTGVKDCD 305 >gi|319792129|ref|YP_004153769.1| L-lactate dehydrogenase (cytochrome) [Variovorax paradoxus EPS] gi|315594592|gb|ADU35658.1| L-lactate dehydrogenase (cytochrome) [Variovorax paradoxus EPS] Length = 385 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 112/366 (30%), Gaps = 78/366 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N+ F L R ++ + +G+ ++ P+ I+ TG G Sbjct: 33 AWTEGTYRANESDFQKIKLRQRV--AVNMEGRSTRTTMIGQDVAMPVAIAP-TGLTGMQH 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FEL-----RQYAPHTV- 118 I A AA+ + + + + + A + F+L R + + Sbjct: 90 ADGEILG--ARAAKAFGIPFTLSTMSICSLEDIAENTDRHPFWFQLYVMKDRDFIERLIE 147 Query: 119 --LISNLGAVQLNYDF--------GVQKAHQAVHVLGADGLF-LHLNP------------ 155 +N+ A+QL D ++ A + L L P Sbjct: 148 RAKAANVTALQLTLDLQILGQRHKDIKNGLTAPPKPTIENLINLATKPRWCMGMLGTKRR 207 Query: 156 --LQEIIQPNGNTNFADLSSKIA-------------LLSSAMDVPLLLKEVGCGLSSMDI 200 G + + LSS A + L+LK + + D Sbjct: 208 TFGNIAGHAKGVKDLSSLSSWTAEQFDPALSWADVEWIKKLWGGKLILKGI---MDVEDA 264 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L SG ++ GG S I +E + Sbjct: 265 RLAASSGADALIVSNHGGRQLDGAPSSIAALPAI-----------------VEAVGSEIE 307 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 GG+R+G D+LK+ LGA + FL + V A++ + KE ++M Sbjct: 308 VWMDGGIRSGQDVLKARALGARGTMIGRSFLYGLGAHGQEGVTRALQIIHKELDITMAFC 367 Query: 320 GTKRVQ 325 G ++ Sbjct: 368 GHTQID 373 >gi|325676646|ref|ZP_08156322.1| lactate 2-monooxygenase [Rhodococcus equi ATCC 33707] gi|325552536|gb|EGD22222.1| lactate 2-monooxygenase [Rhodococcus equi ATCC 33707] Length = 387 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 125/362 (34%), Gaps = 76/362 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + RN + F+ W L+ R L + + D +VE G + P+ ++ + G G Sbjct: 49 AGDETTQRRNVEAFEQWGLLPRML--VGAETPDLTVEAWGHTFASPVFMAPV-GVIGLCD 105 Query: 71 MIERINRNLAIAAEKTKVAMA------------------VGS--QRVMFSDHNAIKSFEL 110 + +A A+ +T V V S Q + + +SF Sbjct: 106 RDRHGDIAVAQASAQTGVPAMFSTLMEDPLEDVVPHAGDVPSFFQLYTPKNRDLAESFVK 165 Query: 111 RQYA------------------PHTVLISNLGAV--QLNYDFGVQKAHQAVHVLGADGLF 150 R A P + N + Q+ ++ + ++G+D Sbjct: 166 RAEAAGYRGITVTLDTWVPGWRPRDLSTGNFPQLRGQVLKNYTSDPVFR--DMVGSDDPQ 223 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 L + + N + + L S +P++LK + D + +G+ Sbjct: 224 LTV-----LHWVQTFGNSLTWAD-LDWLRSLTTLPIVLKGISH---PEDARRAIDAGVDG 274 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRN 269 + GG + GI +L C++ + G+R+ Sbjct: 275 IYCSNHGGRQ------------------ANGGIAALETLPAVVEACDDRVPVLFDSGVRS 316 Query: 270 GVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D++K++ LGA++ G+ P++ AM +V + L E + M + G V + Sbjct: 317 GSDVVKALGLGATMVGIGRPYVYGLAMGGVPGLVHVLRMLLAEAELLMGVNGYPDVAAVR 376 Query: 329 LN 330 N Sbjct: 377 EN 378 >gi|325067960|ref|ZP_08126633.1| L-lactate dehydrogenase [Actinomyces oris K20] Length = 422 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 109/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + + R ++ F D L P I VD S E LG + + P I+ Sbjct: 59 AEGEVSLRRARQAFRDIEFHPDILRPAID---VDTSCEILGGRSAMPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEVAGAGAAGAAGIPFTLSTLGTTSIEDVKAANPHGRNWFQLYVMRQREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + V + + F + +++ + YDF Sbjct: 176 AAAGFDTLMFTVDTPVAGARLRDKRNGFSIPPQITAGTVLNAIPRPWWWYDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + E++ + +D + ++ S +++K V + D Sbjct: 230 TPKLEFASLKSTGGTVGELLDNAMDPTISD--EDLKVIRSMWPGKIVIKGVQ---TVEDS 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + + G+ ++ GG R L ++ R +A Sbjct: 285 KRLIDLGVDGVLLSNHGGRQLDRAPIPFRLLPEV-----------------VREVGKDAT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG D++ ++ LGA G + +L M + V IE L E I +M LL Sbjct: 328 IMVDTGIMNGADVVAAVALGAKFGLVGRAYLYGLMAGGREGVDRMIEILSDEVIRTMKLL 387 Query: 320 GTKRVQEL 327 G + EL Sbjct: 388 GVSSLDEL 395 >gi|332306755|ref|YP_004434606.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174084|gb|AEE23338.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 369 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 124/351 (35%), Gaps = 61/351 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEI--SFDEVDPSVEFLGKKLSFPLLISSMTGGNNK 70 D ++RN+ FD + R L + E+ S + + ++P+LI+ + + Sbjct: 44 AGDDITLNRNRAAFDAIGMNKRVLRKFTKGTTEITLSSD----RFNWPMLIAPLA---YQ 96 Query: 71 MIERINRNLA--IAAEKTKVAMAVGSQRVM-----------------FSDHNAIKSFELR 111 + LA AA + M + + + + + +L Sbjct: 97 SLLHPEGELATAQAANAVNMGMMSSTLSTVRLEEIAAKQQTPKWFQLYMQPDPEHTLDLV 156 Query: 112 QYAPHTVLISN----------LGAVQLNYDFGVQKAHQAVHVLG-ADGLFLHLNPLQEII 160 + A + + L Q F + + A +++ L+P Q ++ Sbjct: 157 RRAENAGYTAIVVTVDAPVSGLRNRQQRAGFSLPPSVMAANLVNYPTSKTQSLSPGQSVL 216 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + D I L +P+ +K + D L +SG ++ GG + Sbjct: 217 LNGLMADAPDWDD-IQWLRENTRLPVWIKGISH---PQDAILAAESGCAGIVVSNHGGRT 272 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + DL I ++ + G+R G DI K+I LG Sbjct: 273 LDGLAASIDLLPPI-----------------RNAVGDDFSILLDSGIRRGTDIFKAIALG 315 Query: 281 ASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ + P L A+ + V ++ L++E ++M L G + + ++ L+ Sbjct: 316 ANGVLIGRPVLNGLAVAGALGVAHSLTLLQQELELAMALTGCETIDDITLD 366 >gi|73537680|ref|YP_298047.1| (S)-2-hydroxy-acid oxidase [Ralstonia eutropha JMP134] gi|72121017|gb|AAZ63203.1| (S)-2-hydroxy-acid oxidase [Ralstonia eutropha JMP134] Length = 397 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 109/370 (29%), Gaps = 83/370 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ +D R L ++S DP G+++ P +I+ TG N + Sbjct: 42 ADDELTLHRNRASYDAIAFTPRTLVDVSVR--DPGCTLFGQRIEMPAVIAP-TGFNGLLT 98 Query: 73 ERINRNLAIAAEKTKVAMAVGS------------------QRVMFSDHNAIKSFELRQYA 114 + LA AA + M Q F DH + R A Sbjct: 99 HEGDLALAHAARDAGIPMCQSMVSTVALERVAETGVRHWMQIYPFKDHENLAGIVRRAEA 158 Query: 115 ---------PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 ++ N +D +A + V + L +++ P+G Sbjct: 159 AGSEAIVVTTDVPVLGN-----REWDRRNYRAPMKLDVANLINVALRPKWWWDVLVPHGM 213 Query: 166 TNFADL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSM 198 +F +L + L L+LK + + Sbjct: 214 PHFRNLGDILPPGQDDARNAATFLSRQMDPSLNWQDVQWLRDLWPRKLILKGI---VRPD 270 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D G+ I GG + ++ +I + Sbjct: 271 DALRARALGVDALVITNHGGRQLDSCVAPIEVLPEI-----------------RAAVGPD 313 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMF 317 I GLR G D +K+ LGA L A V A+ LR E ++ Sbjct: 314 MTLIVDSGLRRGGDFVKARALGADAAMSGRATLYGLAAGGRTGVAHALAILRAEIDRTLG 373 Query: 318 LLGTKRVQEL 327 LLG + +L Sbjct: 374 LLGCPALTDL 383 >gi|319782238|ref|YP_004141714.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168126|gb|ADV11664.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 381 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 114/371 (30%), Gaps = 73/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N++ F R L + D + +G+K+S P+ ++ MTG + E Sbjct: 33 ESTYRANEEDFQKIKFRQRVL--VDMDNRSLASTMIGEKVSMPVALAPTGMTGMQHANGE 90 Query: 74 RINRNLAI------------AAEKTKVAMAVGS----QRVMFSDHNAIKSFELRQYAPHT 117 + A VA Q + D + + + R A Sbjct: 91 MLAAQAAEEFGVPFTLSTMSICSIEDVASVTTKPFWFQLYVLRDKDFVLNLIDRAKAAKC 150 Query: 118 ------VLISNLGAVQLNYDFGVQK---------AHQAVHVLGADGLFLH---------- 152 + + LG + G+ A+ + Sbjct: 151 SALVLTLDLQILGQRHKDIRNGLSAPPKLTLTNIVDMAIRPRWCAAMAGTKRRTFRNIVG 210 Query: 153 -----LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 N + +A + L+LK + L D + K+G Sbjct: 211 HAKGVGNMASLASWTTEQFDLHLSWKDVAWIKERWGGKLILKGI---LDKEDALMAAKTG 267 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S + +I + + GG+ Sbjct: 268 ADAIIVSNHGGRQLDGASSSIGVLEEIAD-----------------AVGDTIEVHMDGGI 310 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R+G D+LK++ LGA + PFL + V A+E +RKE +++ L G + V + Sbjct: 311 RSGQDVLKALCLGAKGTYIGRPFLYGLGALGKEGVTKALEIIRKEMDITLALCGKRLVTD 370 Query: 327 LYLNTALIRHQ 337 + + +R Q Sbjct: 371 MGKDQ--LRRQ 379 >gi|312213113|emb|CBX93195.1| similar to FMN-dependent alpha-hydroxy acid dehydrogenase [Leptosphaeria maculans] Length = 445 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N+ D + L D P++LK + + D ++ G+ ++ GG + Sbjct: 288 NYRDWDD-LQNLRKYWDGPIVLKGIQ---TVEDAHRAMEHGMDGIIVSNHGGRQLDGAIA 343 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D ++IG + + + G+R G D+LK+I LGA + Sbjct: 344 SIDALAEIG--------------ADDKVKSSNLTILFDSGIRTGADVLKAIALGAKAVLV 389 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P++ AM + V + + + S+ LG K ++ + + H+ Sbjct: 390 GRPYIYGLAMGGEEGVKHVLRCMLADTDNSLANLGKKTTADISRDDVRVVHR 441 >gi|120610639|ref|YP_970317.1| L-lactate dehydrogenase (cytochrome) [Acidovorax citrulli AAC00-1] gi|120589103|gb|ABM32543.1| L-lactate dehydrogenase (cytochrome) [Acidovorax citrulli AAC00-1] Length = 386 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 79/371 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N + F L R ++ + +G+ ++ P+ I+ TG G Sbjct: 36 ESTYRANSEDFQKIKLRQRV--AVNMENRTTRTRMVGQDVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN- 122 I A AA V + + + + A F++ R + + + Sbjct: 93 EILG--ARAARAFGVPFTLSTMSICSIEDVAQHAGPGFWFQVYVMRDRDFVERLIDRAKA 150 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNP--------------L 156 + A+Q+ D + + + A+ L L P Sbjct: 151 AGVSALQVTLDLQI-LGQRHKDIKNGLSTPPRPTLANLLDLATKPRWCAGMLGTKRRSFG 209 Query: 157 QEIIQPNGNTNFADLSSK-------------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + G + + L+S I + L+LK + + + D L Sbjct: 210 NIVGHAEGVGDLSSLASWTAEQFDPRLNWRDIEWIKKRWGGKLILKGI---MDADDARLA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +++G ++ GG S I + + Sbjct: 267 VETGADAIVVSNHGGRQLDGAPSSIHALPAI-----------------VEAVGKDIEVWM 309 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK+ LGA + FL V A++ ++KE ++M G Sbjct: 310 DGGIRGGQDVLKAWALGARGTLIGRSFLYGLGAFGEAGVTRALQIIQKELDITMAFCGHT 369 Query: 323 RVQELYLNTAL 333 + ++ + L Sbjct: 370 DIHQVDRSILL 380 >gi|69245140|ref|ZP_00603264.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium DO] gi|257879645|ref|ZP_05659298.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,230,933] gi|257890312|ref|ZP_05669965.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,410] gi|258616745|ref|ZP_05714515.1| L-lactate oxidase [Enterococcus faecium DO] gi|260559692|ref|ZP_05831872.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium C68] gi|293560095|ref|ZP_06676599.1| L-Lactate oxidase [Enterococcus faecium E1162] gi|314938157|ref|ZP_07845462.1| putative L-lactate oxidase [Enterococcus faecium TX0133a04] gi|314943801|ref|ZP_07850536.1| putative L-lactate oxidase [Enterococcus faecium TX0133C] gi|314949760|ref|ZP_07853070.1| putative L-lactate oxidase [Enterococcus faecium TX0082] gi|314951169|ref|ZP_07854227.1| putative L-lactate oxidase [Enterococcus faecium TX0133A] gi|314994399|ref|ZP_07859683.1| putative L-lactate oxidase [Enterococcus faecium TX0133B] gi|314995596|ref|ZP_07860690.1| putative L-lactate oxidase [Enterococcus faecium TX0133a01] gi|68195983|gb|EAN10416.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium DO] gi|257813873|gb|EEV42631.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,230,933] gi|257826672|gb|EEV53298.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium 1,231,410] gi|260074360|gb|EEW62682.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Enterococcus faecium C68] gi|291605962|gb|EFF35392.1| L-Lactate oxidase [Enterococcus faecium E1162] gi|313590184|gb|EFR69029.1| putative L-lactate oxidase [Enterococcus faecium TX0133a01] gi|313591171|gb|EFR70016.1| putative L-lactate oxidase [Enterococcus faecium TX0133B] gi|313596648|gb|EFR75493.1| putative L-lactate oxidase [Enterococcus faecium TX0133A] gi|313597525|gb|EFR76370.1| putative L-lactate oxidase [Enterococcus faecium TX0133C] gi|313642504|gb|EFS07084.1| putative L-lactate oxidase [Enterococcus faecium TX0133a04] gi|313643833|gb|EFS08413.1| putative L-lactate oxidase [Enterococcus faecium TX0082] Length = 367 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 107/340 (31%), Gaps = 58/340 (17%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 N++ F+ +I L ++ D + F + L+ P++++ + + Sbjct: 48 YQENERAFNHRLIIPHVLRDVEL--PDTTTHFDEEMLTAPIIMAPVA------AHGLAHV 99 Query: 79 LAIAAEKTKVA------MAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNL--- 123 A A VA A + A + F+ + + + L Sbjct: 100 KAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDNGINLDILEVA 159 Query: 124 -----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL- 177 A+ L D V ++ L + +Q G T A S Sbjct: 160 KRNGAKAIVLTADATV-GGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKL 218 Query: 178 -------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +++ D+P+ +K V S D+ L+SG ++ GG + D Sbjct: 219 SPKDVEFIAAHSDLPVYVKGVQ---SEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDS 275 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + G+R G + K+I GA L + P Sbjct: 276 LQYVAE-----------------AVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPV 318 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + S V + + E + M L GT+ V+++ Sbjct: 319 IYGLSLGGSTGVHQVFDFFKTELEMVMQLAGTQTVEDIKK 358 >gi|319763879|ref|YP_004127816.1| l-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans BC] gi|330823857|ref|YP_004387160.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] gi|317118440|gb|ADV00929.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans BC] gi|329309229|gb|AEB83644.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] Length = 390 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 107/362 (29%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F L R ++ + + +G+++ P+ I+ + TG Sbjct: 36 EGTYRANEADFHGIKLRQRV--AVNMEGRSTATTMVGQQVKMPVCIAPVGLTG-MQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL---RQYAPHTVLISNLGA 125 I+ A AAEK + + + + + + +A F+L R +I Sbjct: 93 EIHA--ARAAEKFGIPFTLSTMSICSIEDIAENTSAPFWFQLYMMRDREAMARMIGRARD 150 Query: 126 V---QLNYDFGVQKAHQAVHVLG----------------------------------ADG 148 L +Q Q + Sbjct: 151 AKCSALVLTLDLQVIGQRHKDIKNGLTAPPRPTLANIVNLMTKPRWCLGMAGTKRRTFRN 210 Query: 149 LFLHLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 L H+ + ++ N + + + L+LK + + D L + Sbjct: 211 LVGHVKGVSDMNSLAAWTNEQFDPRLSWEDVRWVKQQWGGKLILKGI---MEVEDAVLAV 267 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++G ++ GG S I + + Sbjct: 268 QNGADAIVVSNHGGRQLDGAPSSIRALPAI-----------------VDAVGDRIEVWMD 310 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+ LGA + + V A++ + KE VSM G Sbjct: 311 GGIRSGQDVLKAWALGARGTMIGRAMVYGLGAFGEAGVTKALQIIHKELDVSMAFCGHTN 370 Query: 324 VQ 325 +Q Sbjct: 371 LQ 372 >gi|326318000|ref|YP_004235672.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374836|gb|ADX47105.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] Length = 386 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 116/371 (31%), Gaps = 79/371 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N + F L R ++ + +G++++ P+ I+ TG G Sbjct: 36 ESTYRANSEDFQKIRLRQRV--AVNMENRTTRTTMVGQEVAMPVAIAP-TGLTGMQHADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN- 122 I A AA V + + + + A F++ R + + + Sbjct: 93 EILG--ARAARAFGVPFTLSTMSICSIEDVAEHAGPGFWFQVYVMRDRDFVERLIDRAKA 150 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNP--------------L 156 + A+Q+ D + + + A+ L L P Sbjct: 151 AGVSALQVTLDLQI-LGQRHKDIKNGLSTPPRPTLANLLDLATKPRWCAGMLGTKRRSFG 209 Query: 157 QEIIQPNGNTNFADLSSK-------------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + G + + LSS I + L+LK + + + D L Sbjct: 210 NIVGHAKGVGDLSSLSSWTAEQFDPRLNWRDIEWIKKRWGGKLILKGI---MDADDARLA 266 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +++G ++ GG S I + + Sbjct: 267 VETGADAIVVSNHGGRQLDGAPSSIHALPPI-----------------VDAVGRDIEVWM 309 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK+ LGA + FL V A++ ++KE ++M G Sbjct: 310 DGGVRGGQDVLKAWALGARGTLIGRSFLYGLGAFGEAGVTRALQIIQKELDITMAFCGHT 369 Query: 323 RVQELYLNTAL 333 + ++ + L Sbjct: 370 DIHQVDRSILL 380 >gi|258510900|ref|YP_003184334.1| Lactate 2-monooxygenase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477626|gb|ACV57945.1| Lactate 2-monooxygenase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 388 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 118/352 (33%), Gaps = 68/352 (19%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N++ F W ++ R ++S D S+E G++L +P+L++ + G ++ + Sbjct: 56 ETMRANEEAFAKWRIVPRVFRDVSVR--DLSIELFGERLPYPVLLAPI--GVQSILHA-D 110 Query: 77 RNLAIA--AEKTKVAMAVGSQR------VMFSDHNAIKSFEL-----RQYAPHTVLISNL 123 +A A K + V S + A F+L R A V + Sbjct: 111 GEVAAVRGAAKVGLPYIVSSASTMPLETIAEKAPGATLWFQLYWSRDRDVAQSFVRRA-E 169 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------------------------NPLQE 158 A + A + +L +P Sbjct: 170 AAGCKALVVTLDTPMMAWRERDLERAYLPFLLGEGLGNYLSDPAFRAKLRRPPEEDPASA 229 Query: 159 IIQPNGNTNFADLS-SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 I+ L+ + L D+PLLLK + L D E + G ++ G Sbjct: 230 ILLWTQIFGHPGLTCDDLDWLRETTDLPLLLKGI---LHPDDAEEAFRRGADGIIVSNHG 286 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKS 276 G +P+ +L R E + GG+R G D++K+ Sbjct: 287 GRQVDGA------------------VPSLDALVAIRERVGREKVVLMDGGVRRGSDVVKA 328 Query: 277 IILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + LGA+ + A+D V + L +F ++M L G + + L Sbjct: 329 LALGANAVLVGRLYAYGLAVDGERGVETVLRYLLADFDLTMALSGHRSLSTL 380 >gi|315224093|ref|ZP_07865933.1| L-lactate dehydrogenase [Capnocytophaga ochracea F0287] gi|314945826|gb|EFS97835.1| L-lactate dehydrogenase [Capnocytophaga ochracea F0287] Length = 394 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 107/369 (28%), Gaps = 88/369 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 + N F+ R L + D LG+K+ FP +MT G Sbjct: 36 ESTYRENVSDFNPIKFRQRIL--VDMDNRTLESTLLGQKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R + + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDRDFMKDLIRR 147 Query: 121 SN---------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + LG + G+ + + L + + N Sbjct: 148 AKDAKCSALMITVDLQVLGNRHRDIKNGLSTPPK-FTIPNMINLSTKIPWGLRYVFGNRR 206 Query: 166 TNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F ++ IA + P++LK + ++ D Sbjct: 207 WTFRNIAGHAKSVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG I + +L ++ ++ Sbjct: 264 AIEAVKYGADAIIVSNHGGRQMDDT------------------ISSIKALPDIVSAVGSQ 305 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G G ++LK+ LGA L P + V A++ L E +M Sbjct: 306 TEVWIDSGFYTGQNMLKAWALGAKGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMA 365 Query: 318 LLGTKRVQE 326 G + +Q+ Sbjct: 366 FAGHRNLQD 374 >gi|83943889|ref|ZP_00956346.1| L-lactate dehydrogenase, putative [Sulfitobacter sp. EE-36] gi|83845136|gb|EAP83016.1| L-lactate dehydrogenase, putative [Sulfitobacter sp. EE-36] Length = 388 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTTDFEQIRLRQRV--AVDMSGRSTKTQMIGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI----- 120 I A AAE V + + + + A + + +R LI Sbjct: 90 EI--KAARAAEAFGVPFTLSTMSINSIEDVAEATTKPFWFQLYTMRDEDYVARLIQRAKD 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN-----TN 167 + A+ + D ++ A L A L N + G + Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTAKTLA---NLATKWSWGIGMMGAKRRS 204 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F ++ KIA L ++LK + L + D Sbjct: 205 FGNIVGHVHGVDDTANLGAWTAEQFDPTLDWGKIAKLKEQWGGKVILKGI---LDADDAR 261 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + LK G ++ GG S S+ A ++ + Sbjct: 262 MALKVGADAIIVSNHGGRQLDGAISSIRALP---------------SILEA--VGDQIEV 304 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G D+LK+I +GA + F+ V +A+E + KE +SM L G Sbjct: 305 HLDSGIRSGQDVLKAIAMGAKGTYIGRAFIYGLGAMGQAGVTSALEVIHKELDLSMALCG 364 Query: 321 TKRVQELYLNTALI 334 V L + LI Sbjct: 365 ETSVAGLGKHNLLI 378 >gi|238611279|ref|XP_002397930.1| hypothetical protein MPER_01560 [Moniliophthora perniciosa FA553] gi|215473421|gb|EEB98860.1| hypothetical protein MPER_01560 [Moniliophthora perniciosa FA553] Length = 129 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 13/128 (10%) Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-CNEAQ 260 + G + ++ GG S + DI +L+ P+ Sbjct: 1 MAYDYGCQGIVLSNHGGRQLDTARSGLENLIDI-----------VAALKTRGPWPNPNFA 49 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 GG+R D LK++ LGAS G+ FL + V AI+ LR EF ++M LL Sbjct: 50 VFVDGGVRRASDALKALALGASAVGVGRGFLYAFCSYGQEGVEKAIQILRDEFEMNMRLL 109 Query: 320 GTKRVQEL 327 G + + EL Sbjct: 110 GARSLSEL 117 >gi|237509306|ref|ZP_04522021.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei MSHR346] gi|235001511|gb|EEP50935.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei MSHR346] Length = 441 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDVLIRKR 441 >gi|226365540|ref|YP_002783323.1| oxidoreductase [Rhodococcus opacus B4] gi|226244030|dbj|BAH54378.1| putative oxidoreductase [Rhodococcus opacus B4] Length = 393 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 238 WDDIAWLREQWGGPFMLKGV---MRVDDAKRAVDAGVTAISVSNHGGNNLDGTPAPIRAL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAE-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 337 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ LR ++ LG + +L + +I Sbjct: 338 WGLSANGQAGVENVLDVLRGGIDSALLGLGHSNIHDLTPSDVVI 381 >gi|221197820|ref|ZP_03570866.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2M] gi|221204622|ref|ZP_03577639.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2] gi|221213098|ref|ZP_03586074.1| FMN-dependent dehydrogenase [Burkholderia multivorans CGD1] gi|221167311|gb|EED99781.1| FMN-dependent dehydrogenase [Burkholderia multivorans CGD1] gi|221175479|gb|EEE07909.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2] gi|221181752|gb|EEE14153.1| (S)-mandelate dehydrogenase (L(+)-mandelatedehydrogenase) (MDH) [Burkholderia multivorans CGD2M] Length = 405 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + D + +A + + L++K + LS D G ++ GG Sbjct: 255 RDHLDW-THLAQIRAQWKGSLVVKGI---LSVEDALAARDVGADGIILSNHGGRQLDGAV 310 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S + D+ + GG R G D+LK+I LGA + Sbjct: 311 SPMRILRDV-----------------VTALEPAFPVMLDGGFRRGADVLKAIALGARMVF 353 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + PF A+ V AI L++E M +LG + +EL+ Sbjct: 354 VGRPFNYAMAVAGEAGVAHAIRLLQEEVDRDMAMLGARTCRELH 397 >gi|170749811|ref|YP_001756071.1| L-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] gi|170656333|gb|ACB25388.1| L-lactate dehydrogenase (cytochrome) [Methylobacterium radiotolerans JCM 2831] Length = 435 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 25/181 (13%) Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 Q ++ + + + LL+K + L+ D+++ G ++ Sbjct: 274 QGAVRNTIARDQLSW-KNLEAIRKRWSGNLLVKGL---LAPEDVDIARACGADGVILSTH 329 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG + D+ +I + I G+R G D++K+ Sbjct: 330 GGRQLDYAVAPLDVLPEIA------------------ARKGGLKIIVDSGVRRGTDVMKA 371 Query: 277 IILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGA L PF+ A+ V A+ L++E M L+G R+ EL N +R Sbjct: 372 LALGADFVLLGRPFMFAAALGGVPGVEHAMRILKEELNRDMALIGVNRLSEL--NPDFLR 429 Query: 336 H 336 Sbjct: 430 R 430 >gi|254475887|ref|ZP_05089273.1| L-lactate dehydrogenase [Ruegeria sp. R11] gi|214030130|gb|EEB70965.1| L-lactate dehydrogenase [Ruegeria sp. R11] Length = 389 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 117/371 (31%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRDNTNDFEKIRLRQRV--AVDMAGRSTATQMIGQDVTMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FE---------LRQYAPHT-- 117 I A AAE V + + + + A + F+ +R+ Sbjct: 90 EI--KAARAAEAFGVPFTLSTMSINSIEDVAEATTKPFWFQLYTMKDEDYVRRLIQRAKD 147 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQA---------------VHVLGAD-----G 148 + + LG + G+ + + +LGA Sbjct: 148 ARCSALVITLDLQILGQRHKDLKNGLSAPPKLTPKTIANLMTKWSWGIEILGAKRRNFGN 207 Query: 149 LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H++ + + + + KI L ++LK + L D ++ Sbjct: 208 IVGHVDGISDASSLGAWTAEQFDPSLDWGKIEKLMEMWGGKVILKGI---LDVEDAKMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + I ++ + Sbjct: 265 KLGADAIVVSNHGGRQLDGALSSIQMLPAIMD-----------------AVGDQVEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G DILK+I LGA + F+ V A+E L KE +M L G K Sbjct: 308 SGIRSGQDILKAIALGAKGTMIGRAFVYGLGAMGQAGVTKALEVLHKELDTTMALCGEKT 367 Query: 324 VQELYLNTALI 334 V L + LI Sbjct: 368 VHGLGRHNLLI 378 >gi|260431159|ref|ZP_05785130.1| L-lactate dehydrogenase (cytochrome) [Silicibacter lacuscaerulensis ITI-1157] gi|260414987|gb|EEX08246.1| L-lactate dehydrogenase (cytochrome) [Silicibacter lacuscaerulensis ITI-1157] Length = 388 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 21/166 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KI L ++LK + L D ++ K G ++ GG S + Sbjct: 235 WKKIEKLMEQWGGKVILKGI---LDPEDAKMAAKLGADAIVVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + G+R+G D+LK++ LGA + F+ Sbjct: 292 PRIMD-----------------AVGGDVEVHLDSGIRSGQDVLKALALGAKGTYIGRAFV 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V A+E ++KE +M L G + V +L + L+ Sbjct: 335 YGLGAMGQKGVTTALEVIQKELDTTMALCGERNVADLGPHNLLVPQ 380 >gi|330821737|ref|YP_004350599.1| putative L-lactate dehydrogenase [Burkholderia gladioli BSR3] gi|327373732|gb|AEA65087.1| putative L-lactate dehydrogenase [Burkholderia gladioli BSR3] Length = 405 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 102/360 (28%), Gaps = 87/360 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ +D N++ + ++ I R L + S G S P I+ M G + Sbjct: 45 AERNASLDDNQRVYAEYRFITRVL--RDVSKRSQSTTLFGHTWSAPFGIAPM-GISALSA 101 Query: 73 ERINRNLAIAAEKTKVAM-AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R + LA AA + + M GS + + + AP T + L Sbjct: 102 YRGDLVLAQAARRADIPMIMSGSSLIPLE--------TVARAAPRTWFQAYLPGEADKIH 153 Query: 132 FGVQKAHQA-----VHVLGADGLF-----------LHLNPLQEIIQPNGNTNFADL---- 171 V++ +A V + L L P + G T+ L Sbjct: 154 ALVERVERAGYETLVLTVDTAVLANRENNVRAGFSTPLKPSLRLAM-EGITHPRWLFGTA 212 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMD------------------------ 199 + P+ + V + D Sbjct: 213 LKTLVRHGMPHFENSYATRGAPIFSRRVARDFGAKDHLNWEHVEQIRRQWKGRLIIKGLL 272 Query: 200 ----IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + + G+ ++ GG + + +I Sbjct: 273 AADDASMASERGVDGIIVSNHGGRQLDGAVAPLRVLPEI-----------------VAAL 315 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIV 314 + GG+R G D+LK++ LGA + PF A+ V AI LR E Sbjct: 316 RGRIPVMIDGGIRRGTDVLKALALGADFVFVGRPFNYAAAVAGEPGVDHAIAILRAEVQR 375 >gi|158315011|ref|YP_001507519.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EAN1pec] gi|158110416|gb|ABW12613.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EAN1pec] Length = 394 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L D P LLK V D +G+ ++ GG + + Sbjct: 237 WEDIAWLRQQWDGPFLLKGVSR---VDDARRARDAGVSAISVSNHGGNNLDSTPAPIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + + + + GG+R G D++K++ LGA + +L Sbjct: 294 AAV-----------------VDAVGTDVEVLMDGGIRRGGDVVKALALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG + EL + L+ Sbjct: 337 WGLAAGGQAGVENVLDVLRNGIDSALLSLGHSSIHELTPDDVLV 380 >gi|193213880|ref|YP_001995079.1| glutamate synthase (NADPH) [Chloroherpeton thalassium ATCC 35110] gi|193087357|gb|ACF12632.1| Glutamate synthase (NADPH) [Chloroherpeton thalassium ATCC 35110] Length = 499 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 70/371 (18%), Positives = 127/371 (34%), Gaps = 73/371 (19%) Query: 21 RNKKFFDDWHLIHRALPE--ISFDEV--DPSVEFLGK-----KLSFPLLISSMTGGNNKM 71 +++ FD+ + L + DEV + + +L+ P +S M+ G+ Sbjct: 129 KHRNLFDEILFLPGQLARRPLRPDEVAVNLKTIIGAQSAKPIELALPFFVSHMSFGSLSK 188 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 +I A KT G D +++ A++ Sbjct: 189 EAKIALAKGSAMAKTATCSGEGGMI----DEEQQAAYKYIFEYSTGRFGVTDDALKKCDA 244 Query: 132 FGVQKAHQAVHVLGADGLFLHL----------NPLQEIIQPNGNTNFA---DLSSKIALL 178 ++ A LG L + P Q+II P +T+ DL K+ L Sbjct: 245 VEIKIGQAAKAGLGGHLLAEKVTEEIARVRKVPPFQDIISPANHTDIKSEDDLRKKVNWL 304 Query: 179 SSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 +D P+ +K V L D+E+ L + + I RGG++ + +D Sbjct: 305 REKIDGKPVGIKLVAGNLE-DDLEVALYAQPDFITIDCRGGSTGAAPAHVKD-------- 355 Query: 238 FQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLAS---- 288 ++GIP P ++ AR + I +GG+R DI K I +GA L + Sbjct: 356 --NFGIPAPYAVYQARKIFREKQVADTALILTGGIRTTADIAKCIAMGADAVALGTTAMI 413 Query: 289 -----------------------PFLKP---AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 P L+ +S+ + + E + +LG K Sbjct: 414 GIGCQQYRVCHKGTCPVGIATQDPKLRERFNIEESAKMLANLFLVYKSELEDIVRILGRK 473 Query: 323 RVQELYLNTAL 333 + +L + + Sbjct: 474 NIHDLEYSDLV 484 >gi|86135848|ref|ZP_01054427.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. MED193] gi|85826722|gb|EAQ46918.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. MED193] Length = 386 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 110/362 (30%), Gaps = 70/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G N++ D L R L + + D SV + + P +S M G N Sbjct: 33 AGQEHGAALNQRALQDIRLTPRVL--CNVAQRDLSVTQFDRLMLRPFGVSPM-GMCNLAA 89 Query: 73 ERINRNLAIAAEKTKVAMAVGS-QRVMFSD----HNAIKSFELRQYAPHTV--------- 118 + LA A + +V V + F+L ++ Sbjct: 90 PGADLMLAKIAREYRVPHGVSTVASTDLETLHKASGGTAWFQL-YFSGDGSGTMKLVERA 148 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-----------IQPNGNTN 167 ++ G + L D + + + + + P Q + G+ Sbjct: 149 KMAGYGTLILTLDVP-EVGRRPRELRHGFKMPFRIGPRQFLDFAMHPGWSLSSLAKGSPK 207 Query: 168 FADLSSK-----------------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 A+ K + +L A L++K V L+ D +G+ Sbjct: 208 LANFDGKNYIFDRTESRAAADWAYLDVLRQAWPGQLVVKGV---LNPEDALRLRDAGVDA 264 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRN 269 ++ G P +L R E G+R Sbjct: 265 IQVSSHGCRQLESAP------------------PAIFALRKIRETLGPEFPLFFDSGIRT 306 Query: 270 GVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G DI+K+ ++GA L L A + + A + L +E ++M LG + EL Sbjct: 307 GEDIVKAYVMGADFVFLGRILLFAIAAGGIEGLRALWDILSQEVSLAMAQLGVTTIAELK 366 Query: 329 LN 330 Sbjct: 367 NA 368 >gi|307324061|ref|ZP_07603270.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] gi|306890510|gb|EFN21487.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces violaceusniger Tu 4113] Length = 377 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 23/165 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L +P+LLK L D L ++ G+ ++ GG + + +L Sbjct: 211 WDHIDWLRGITSLPILLKG---ALHPEDARLAVRHGVDGLLLSNHGGRQLDTVPATIELL 267 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI + GG+R G D++K++ LGAS G+ P + Sbjct: 268 PDIHA-----------------AVAGRIPIVLDGGVRRGTDVVKALALGASAVGIGRPVM 310 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + V +E LR+EF ++ L G VQ+L L+R Sbjct: 311 WALAEGGEKGVRRLLELLREEFDHALALCGASGVQDL--TPDLVR 353 >gi|300824246|ref|ZP_07104363.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|300523220|gb|EFK44289.1| L-lactate dehydrogenase [Escherichia coli MS 119-7] gi|323968912|gb|EGB64238.1| FMN-dependent dehydrogenase [Escherichia coli TA007] Length = 388 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L D + ++ G ++ GG Sbjct: 234 WNDLEWIRDGWKGKLIIKGI---LVPEDAKNAVRLGADGIIVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L +A ++ +A G+R+GVD+++ + LGA L + Sbjct: 284 -----------IPTARALPAIADAVGDDITVLADSGIRSGVDVVRMLALGAKGVLLGRAY 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + A V + ++ V+M L+G ++ Sbjct: 333 IYALAAAGKKGVEHLLRLYAEDMKVTMTLIGASSPADI 370 >gi|76817657|ref|YP_335763.1| putative L(+)-mandelate dehydrogenase [Burkholderia pseudomallei 1710b] gi|254186884|ref|ZP_04893400.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei Pasteur 52237] gi|254263124|ref|ZP_04953989.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 1710a] gi|254301429|ref|ZP_04968873.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 406e] gi|76582130|gb|ABA51604.1| putative L(+)-mandelate dehydrogenase [Burkholderia pseudomallei 1710b] gi|157811441|gb|EDO88611.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 406e] gi|157934568|gb|EDO90238.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei Pasteur 52237] gi|254214126|gb|EET03511.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 1710a] Length = 441 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDMLIRKR 441 >gi|254436953|ref|ZP_05050447.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] gi|198252399|gb|EDY76713.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] Length = 381 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 102/363 (28%), Gaps = 74/363 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ G+ N+ D + L + D LG+K P I+ + G + M Sbjct: 35 RELGLKTNRDALDAIGFMPSVL--CGRTKADLQTTLLGQKYDLPFGIAPI-GMSGMMWAG 91 Query: 75 INRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 R LA AA + ++ S ++ + + ++ ++ + A Sbjct: 92 AERMLAQAAVAHNIPFSLSSVAVASPEDVAPHIGNNGWFQHYPVKSAELRRTMLPRIKAA 151 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNP--------------------LQEIIQPNGNT 166 + + L + P L+E I P Sbjct: 152 GFHTLIITVDVPEESRRERQRRANLTVPPKADLRTIVEMAQCPSWCLAHLREGIMPR-MR 210 Query: 167 NF-------------------ADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 F + + L D L++K V L D Sbjct: 211 FFDDYVPQRGRESFTHAGALIRGIPDWQYLQELRQEWDGHLVVKGV---LRPEDAARMAA 267 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ G + + + I + I Sbjct: 268 EGVDCIWVSNHSGRQFEAGPAVIEQLPKIRE-----------------AVGPDVPLIYDS 310 Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+ G+DI++++ GA + F A + + I L+ + +M LG + + Sbjct: 311 GVAWGMDIMRALAKGADFVMVGRAFQFSVAAFGARGIDHLIHILKADIEANMSQLGVENI 370 Query: 325 QEL 327 L Sbjct: 371 NRL 373 >gi|255264407|ref|ZP_05343749.1| L-lactate dehydrogenase [Thalassiobium sp. R2A62] gi|255106742|gb|EET49416.1| L-lactate dehydrogenase [Thalassiobium sp. R2A62] Length = 387 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 114/371 (30%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD L R + + + + +G+ ++ P+ ++ + TG + E Sbjct: 33 EQTFRENTSDFDQIRLRQRV--AVDMQDRSTATQMIGEDVAMPVALAPVGLTGMQSADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQY---APHTVLISN 122 A AAEK V + + + + A + + +R A + Sbjct: 91 I---KAARAAEKFGVPFTLSTMSICSLEDIAEHTTKPFWFQLYVMRDADFVADMIARAKD 147 Query: 123 LGAVQLNYDFGVQKAHQAVHVL------------------------GADGLFL------- 151 +G L +Q Q L G + L Sbjct: 148 VGCSALVLTLDLQILGQRHKDLKNGLSAPPKLTPKTIANLATKWRWGLEMLQTKRRTFGN 207 Query: 152 ---HLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 H ++ + + K+A L L+LK + L + D ++ Sbjct: 208 IVGHAKSVENMSSLSSWTEEQFDPRLDWDKVARLKEQWGGKLILKGI---LDAEDAKMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + I + + Sbjct: 265 KIGADAIIVSNHGGRQLDGALSSIRMLPSI-----------------IDAVGPDVEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ +GA + ++ V A+ + E +M L G K Sbjct: 308 SGIRSGQDVLKAMAMGAKGTYIGRAYIYGLGAMGEHGVSEALRVIHTELDTTMALCGHKN 367 Query: 324 VQELYLNTALI 334 + ++ + L+ Sbjct: 368 INQVDRDILLV 378 >gi|227534405|ref|ZP_03964454.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187959|gb|EEI68026.1| possible (S)-2-hydroxy-acid oxidase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 228 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 24/226 (10%) Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG--- 164 + L Q L L A + + H+ G N Q+ + G Sbjct: 15 YLLDQAKQAGALAIILTADSTLGGYREKDVMNHCHLKGRLANLEGYNTGQQGVGAGGLFK 74 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + I L+S +P+++K + D + +G ++ GG Sbjct: 75 ESMQKLDLATIDKLASYSGLPIIVKGIQH---PDDAVAAITAGAAGIYVSNHGGRQLDGA 131 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + I + I GG++ G +LK++ LGA L Sbjct: 132 PGAIEALPAIAA-----------------AVDHRVPIIFDGGVQRGTHVLKALALGADLV 174 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 G+ PF A+ + V A + ++ E ++M L G + + ++ Sbjct: 175 GIGRPFSYGLALGGWEGVKAVADHMKMEINIAMQLTGCQTMADVKQ 220 >gi|254194282|ref|ZP_04900714.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei S13] gi|169651033|gb|EDS83726.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei S13] Length = 441 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDMLIRKR 441 >gi|134281937|ref|ZP_01768643.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 305] gi|134246466|gb|EBA46554.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 305] Length = 441 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDMLIRKR 441 >gi|257075588|ref|ZP_05569949.1| lactate 2-monooxygenase [Ferroplasma acidarmanus fer1] Length = 388 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 113/355 (31%), Gaps = 66/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N K F + + R L + + S+ G+K P +I+ + G +I Sbjct: 49 AGSEDTMIENIKAFSRYRIRPRYLH--DVENRNQSITLFGRKQDSPFIIAPI--GVQSII 104 Query: 73 ERINRNLAIAAEKTKVAM-----AVGSQRVM---FSDHNAIKSFE-------------LR 111 + + A A + M V S + + K F+ + Sbjct: 105 HK-DAEYASAGAAASLGMPYILSTVSSTSIEDIAAKFPESEKWFQLYPGKDENVMKSMVN 163 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQ----PNGNT 166 + + + + Q A + L +G+ + + + P N Sbjct: 164 RAEKAGYKVIVVTVDTTMLGWREQDIKNAYLPFLQGEGIANFITDPEFLKMLETSPENNM 223 Query: 167 ------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 N + + S +P+L+K + S D+ +K G I+ Sbjct: 224 QAAIEEFLMVYVNPSFTWDGFRKIRSWTKLPILIKGIS---SEEDVHTAVKYGADGVIIS 280 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC-NEAQFIASGGLRNGVDI 273 GG I + +L+ E + G+R+ D Sbjct: 281 NHGGRQVDGS------------------ISSLEALDEITGENKPEFTILFDSGIRHAADA 322 Query: 274 LKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +K++ LGAS + P+ A+ + + LR EF + M L G + +L Sbjct: 323 MKALALGASGVLIGRPYCYAMAVAGQRGIERYLNQLRAEFDLQMALSGYSSISQL 377 >gi|328676295|gb|AEB27165.1| L-lactate dehydrogenase [Francisella cf. novicida Fx1] Length = 403 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 122/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 22 RKVYHHRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 79 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 80 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 136 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 137 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 195 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 196 INLSTKVPWCLNMLKTSNRTFGNIVNHAANKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 255 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + G ++ GG S + +I Sbjct: 256 WNGRMIIKGI---MDTQDAIMAKNIGADAIIVSNHGGRQLDGAPSSISVLEEI------- 305 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA+ G + P + Sbjct: 306 ----------IDAVDRKLEVLIDSGIRSGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 355 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 356 AYRVLEIFYQEMDKTMAFCGHTNIN 380 >gi|124381245|ref|YP_001025834.1| FMN-dependent family dehydrogenase [Burkholderia mallei NCTC 10229] gi|217425276|ref|ZP_03456771.1| dehydrogenase, FMN-dependent [Burkholderia pseudomallei 576] gi|251767703|ref|ZP_02268160.2| FMN-dependent dehydrogenase [Burkholderia mallei PRL-20] gi|254176502|ref|ZP_04883160.1| dehydrogenase, FMN-dependent family [Burkholderia mallei ATCC 10399] gi|254201015|ref|ZP_04907380.1| FMN-dependent dehydrogenase [Burkholderia mallei FMH] gi|254204978|ref|ZP_04911331.1| FMN-dependent dehydrogenase [Burkholderia mallei JHU] gi|254359100|ref|ZP_04975372.1| FMN-dependent dehydrogenase [Burkholderia mallei 2002721280] gi|147748627|gb|EDK55702.1| FMN-dependent dehydrogenase [Burkholderia mallei FMH] gi|147754564|gb|EDK61628.1| FMN-dependent dehydrogenase [Burkholderia mallei JHU] gi|148028287|gb|EDK86247.1| FMN-dependent dehydrogenase [Burkholderia mallei 2002721280] gi|160697544|gb|EDP87514.1| dehydrogenase, FMN-dependent family [Burkholderia mallei ATCC 10399] gi|217391881|gb|EEC31908.1| dehydrogenase, FMN-dependent [Burkholderia pseudomallei 576] gi|243061935|gb|EES44121.1| FMN-dependent dehydrogenase [Burkholderia mallei PRL-20] gi|261826220|gb|ABN00266.2| dehydrogenase, FMN-dependent family [Burkholderia mallei NCTC 10229] Length = 441 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDMLIRKR 441 >gi|226196123|ref|ZP_03791709.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|225932016|gb|EEH28017.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pakistan 9] Length = 447 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 95 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 151 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 152 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 212 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 271 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 272 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 328 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 329 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 371 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 372 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 431 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 432 ANGCDAL-TPDMLIRKR 447 >gi|126456971|ref|YP_001076145.1| FMN-dependent family dehydrogenase [Burkholderia pseudomallei 1106a] gi|242312496|ref|ZP_04811513.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106b] gi|126230739|gb|ABN94152.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106a] gi|242135735|gb|EES22138.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106b] Length = 447 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 95 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 151 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 152 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 212 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 271 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 272 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 328 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 329 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 371 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 372 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 431 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 432 ANGCDAL-TPDMLIRKR 447 >gi|213024370|ref|ZP_03338817.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 195 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 33/171 (19%) Query: 162 PNGNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 P G ++ + + + D P+++K + L D ++ G Sbjct: 43 PTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI---LDPEDARDAVRFGADGI 99 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNG 270 ++ GG + + + +L +A + +A G+RNG Sbjct: 100 VVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADSGIRNG 141 Query: 271 VDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 +D+++ I LGA L +L A V ++ + KE V+M L G Sbjct: 142 LDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLTG 192 >gi|126447480|ref|YP_001077918.1| FMN-dependent family dehydrogenase [Burkholderia mallei NCTC 10247] gi|238563127|ref|ZP_00439353.2| dehydrogenase, FMN-dependent family [Burkholderia mallei GB8 horse 4] gi|126240334|gb|ABO03446.1| dehydrogenase, FMN-dependent family [Burkholderia mallei NCTC 10247] gi|238521287|gb|EEP84740.1| dehydrogenase, FMN-dependent family [Burkholderia mallei GB8 horse 4] Length = 447 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 95 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 151 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 152 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 212 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 271 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 272 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 328 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 329 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 371 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 372 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 431 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 432 ANGCDAL-TPDMLIRKR 447 >gi|328956929|ref|YP_004374315.1| L-lactate oxidase [Carnobacterium sp. 17-4] gi|328673253|gb|AEB29299.1| L-lactate oxidase [Carnobacterium sp. 17-4] Length = 390 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 113/339 (33%), Gaps = 49/339 (14%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIERINR 77 I +N + F+ ++ R L I + D G +L+ P++++ + G + Sbjct: 72 IKQNIESFNHKLIVPRVLKNI--EHPDQRTSVFGSELATPIIMAPVAAHGLANVAAEPAT 129 Query: 78 NLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTVLISNL-------- 123 A A ++ M + S + + A + F+ + L Sbjct: 130 --AKAVAESGSIMTISSYANKPFKEISEAGAGAPQWFQFYMSKDDGINRDILDEAKANGV 187 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--------SSKI 175 A+ L D V +A L + +Q G + + + Sbjct: 188 KAIVLTADATVGGNREA-DKRNGFVFPLGMPIVQAYQSGVGQSMDSVYGSSKQVLSPKDV 246 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 ++S +P+ +K V S+ D + L SG + GG + D ++ Sbjct: 247 EFIASYSGLPVFVKGVQ---SAEDALISLASGAGGIWVTNHGGRQLDGGPAAFDSLQNVA 303 Query: 236 IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PA 294 + + G+R G + K++ GA L + P + A Sbjct: 304 E-----------------AVDRKVPVVFDSGVRRGQHVFKALASGADLVAIGRPAIYGLA 346 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + S V + + + E + M L GTK V+++ L Sbjct: 347 LGGSQGVKSVFDHFKHELEIVMQLAGTKTVEDIKNTVLL 385 >gi|126442779|ref|YP_001063193.1| FMN-dependent family dehydrogenase [Burkholderia pseudomallei 668] gi|126222270|gb|ABN85775.1| dehydrogenase, FMN-dependent family [Burkholderia pseudomallei 668] Length = 441 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 89 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 145 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 146 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 205 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 206 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 265 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 266 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 322 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 323 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 365 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 366 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 425 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 426 ANGCDAL-TPDMLIRKR 441 >gi|149376300|ref|ZP_01894064.1| lactate dehydrogenase [Marinobacter algicola DG893] gi|149359497|gb|EDM47957.1| lactate dehydrogenase [Marinobacter algicola DG893] Length = 284 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 53/168 (31%), Gaps = 21/168 (12%) Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 Q + I L ++K + L D L ++ G ++ GG + Sbjct: 114 QAKPVRQSGMTWADIGRLREFWPGKFIVKGI---LRPEDALLAIEHGADGIVVSNHGGRN 170 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D DI A + G+R G DI K++ LG Sbjct: 171 LDSSVASIDALPDI-----------------VAAVAGRATVLFDSGIRRGSDIAKALALG 213 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + L A A++ LR E +M LG V EL Sbjct: 214 ADSVLVGRATLYGVAAGGQRGAEHALKILRSELRKTMAYLGCTDVSEL 261 >gi|254368544|ref|ZP_04984560.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica FSC022] gi|157121447|gb|EDO65638.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica FSC022] Length = 385 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 123/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 15 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 73 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 189 INLSTKVPWCLNMLKTSNRTFGNIVNHAANKGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + +G ++ GG + S + +I Sbjct: 249 WNGRMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLNGAPSSISVLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R G D+LK+ LGA+ G + P + Sbjct: 299 ----------IDAVDRKLEVLIDSGIRTGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFYQEMDKTMAFCGHTNIN 373 >gi|168058103|ref|XP_001781050.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667531|gb|EDQ54159.1| predicted protein [Physcomitrella patens subsp. patens] Length = 332 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 50/274 (18%) Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 RI N + MA+ S + + +R + H N+ A Q Sbjct: 79 RIGHNPGRLKSRHNYGMALSSLATSSMEEVSSVGPSIRFFQLHVNKDRNVVAHQ------ 132 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQ----EIIQPNGNTNFADL------------SSKIAL 177 V++A +A G + L ++P + E Q N + + Sbjct: 133 VRRAERA----GFKAIVLTVDPPRTGRREKKQQEQRPNSHSIHELDSRKRPILSLQHVKW 188 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L S +P+L+K + L++ D ++ + +G ++ + + Sbjct: 189 LQSITKLPVLIKGI---LTAEDRKIAICNGAAGIIVSNHSARQLDYVPA----------- 234 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMD 296 T +LE+ + GG+R G D+ K++ LGAS G+ P L A D Sbjct: 235 -------TISALEVVQVAAGRFSVFLDGGVRRGTDVFKALALGAS--GIRRPVLFGLACD 285 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V ++ R EF + + L G ++ ++ + Sbjct: 286 GQQGVERVLQLRRDEFELVVTLAGCTKLSDINRS 319 >gi|237784650|ref|YP_002905355.1| L-lactate dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] gi|237757562|gb|ACR16812.1| L-lactate dehydrogenase [Corynebacterium kroppenstedtii DSM 44385] Length = 418 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 115/362 (31%), Gaps = 72/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I R +K F+D H ++ + E+D S LG S P I+ TG M Sbjct: 59 AEGEISIARARKAFEDVEF-HPSILK-DASEIDMSTSILGGPSSLPFGIAP-TGFTRLMQ 115 Query: 73 ERINRNLAIAAEKTKVAMAV---GSQRVM---FSDHNAIKSFE-------------LRQY 113 A AA + + G+ + ++ F+ + + Sbjct: 116 TEGEVAGAGAAGAAGIPFCLSTLGTTSIEDVKATNPTGRNWFQLYVMRKREISYGLVERA 175 Query: 114 AP----------HTVLISNL-----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ- 157 A T + N + V+ A+ FL PL+ Sbjct: 176 AQAGFDTLFFTVDTPVAGNRMRDVRHGFSIPPQLTVKTVVDAIPRPWWWIDFLTTPPLEF 235 Query: 158 -----------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 E++ N + + + L +K V + D + Sbjct: 236 ASLSSTGGTVGELL--NNAMDPTISFDDLKTIREMWPGKLAVKGVQ---NLEDSKKLADL 290 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG R +P L E+AR + + + G Sbjct: 291 GVDSIVLSNHGGRQLDRAP-----------------VPFLLLPEVAREVGKDVEIMVDTG 333 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 + NG DI+ ++ LGA + +L M A V IE LR + +M LL ++ Sbjct: 334 IMNGADIVAALALGADFTLIGRAYLYGLMAGGRAGVDRTIEILRSQIERTMKLLQVTSIE 393 Query: 326 EL 327 EL Sbjct: 394 EL 395 >gi|221124340|ref|XP_002162558.1| PREDICTED: similar to CG18003 CG18003-PB [Hydra magnipapillata] gi|260220689|emb|CBA28492.1| L-lactate dehydrogenase [cytochrome] [Curvibacter putative symbiont of Hydra magnipapillata] Length = 381 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 110/362 (30%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N++ F L R ++ + + +G P+ I+ + TG Sbjct: 33 EGTYRANEEDFQKIKLRQRV--AVNMENRTTATTMVGTVAKMPVAIAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL---RQYAPHTVLISNLGA 125 I+ A AAEK + + + + + + +A F+L R +I A Sbjct: 90 EIHA--ARAAEKFGIPFTLSTMSICSIEDIAENTSAPFWFQLYMMRDRNAMANMIERARA 147 Query: 126 V---QLNYDFGVQKAHQAVHVLG-----------ADGLFL-------------------- 151 L +Q Q L A+ + L Sbjct: 148 ARCSALVLTLDLQVIGQRHKDLKNGLSAPPRPTLANIINLATKPRWCLGMLGTRRHTFRN 207 Query: 152 ---HLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 H+ + ++ N + + + L+LK + D L Sbjct: 208 LVGHVESVSDMKSLAAWTNEQFDPRLSWDDVKWVKEKWGGKLILKGIQ---DVEDAVLAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +SG ++ GG S I ++ + Sbjct: 265 QSGADAIVVSNHGGRQLDGAPSSISALPAI-----------------VAAVGDKLEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+ LGA + + +A V A++ + KE V+M G Sbjct: 308 GGIRSGQDVLKAWALGAKGTMIGRAMVYGLGAMGEAGVTKALQIIHKELDVTMAFCGHTN 367 Query: 324 VQ 325 +Q Sbjct: 368 IQ 369 >gi|331696415|ref|YP_004332654.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] gi|326951104|gb|AEA24801.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] Length = 407 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 21/170 (12%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + NG N A + + P++LK V ++ D + + G R ++ GG Sbjct: 231 AVYTNGLLNPAHTWRDLEWMVERWGGPVVLKGV---MTGEDAKRAVDVGCRAVAVSNHGG 287 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + + D+ ++ + + GG+R G D++K++ Sbjct: 288 RQGDSVPAALDVLPEV-----------------VDAVPADVDVLLDGGVRRGGDVVKALA 330 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA L P++ A + V + LR E ++ L+G V L Sbjct: 331 LGARACLLGRPWVYGLAAGGTAGVERMLAILRDEIDRTLALIGRPGVATL 380 Score = 36.0 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 + + N+ FD R L + E V LG++L P+++ TG Sbjct: 39 AEDELTLTENEAAFDRVSFRPRVL--VDVSERPQHVTVLGRRLELPVILGP-TG 89 >gi|167724265|ref|ZP_02407501.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei DM98] Length = 407 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 112 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 392 ANGCDAL-TPDMLIRKR 407 >gi|121703992|ref|XP_001270260.1| oxidoreductase [Aspergillus clavatus NRRL 1] gi|119398404|gb|EAW08834.1| oxidoreductase [Aspergillus clavatus NRRL 1] Length = 403 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 22/170 (12%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 KIA L D P++LK + D +L LK+G ++ GG Sbjct: 246 PHTWDKIAFLRENWDGPIVLKGIQH---VEDAKLALKAGCDGIIVSNHGGRQVDGAIGSL 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ +I ++ + G+R GVDI+K++ LGA ++ Sbjct: 303 DVLPEI-----------------VEAVGDKMTVLFDSGIRTGVDIIKALCLGAKAVLVSR 345 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P + A+D + L + SM L G + E Y + + Q Sbjct: 346 PVIYGLAVDGKQGAKQILRGLLADLWQSMGLAGICTISE-YNRDVVRKVQ 394 >gi|118496831|ref|YP_897881.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida U112] gi|194324489|ref|ZP_03058261.1| putative L-lactate dehydrogenase [Francisella tularensis subsp. novicida FTE] gi|208780555|ref|ZP_03247894.1| FMN-dependent dehydrogenase family protein [Francisella novicida FTG] gi|254372195|ref|ZP_04987687.1| L-lactate dehydrogenase [Francisella tularensis subsp. novicida GA99-3549] gi|118422737|gb|ABK89127.1| L-lactate dehydrogenase [Francisella novicida U112] gi|151569925|gb|EDN35579.1| L-lactate dehydrogenase [Francisella novicida GA99-3549] gi|194321324|gb|EDX18810.1| putative L-lactate dehydrogenase [Francisella tularensis subsp. novicida FTE] gi|208743530|gb|EDZ89835.1| FMN-dependent dehydrogenase family protein [Francisella novicida FTG] Length = 385 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 123/385 (31%), Gaps = 90/385 (23%) Query: 5 RKIDH-------INIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK 53 RK+ H ++ + + N++ F ++ + L +I + LG+ Sbjct: 15 RKVYHRRVPKMFVDYCEAGSWQQQTLKYNQQDFGNYLFRQKVLTDIQ--NRSLKTKILGQ 72 Query: 54 KLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS---- 107 + PL+ + + G G I+ A AAEK + + + + ++ A + Sbjct: 73 EYKMPLVFAPI-GLLGMQHADGEIHA--ARAAEKFGIPFTLSTMSICSTEEVAKHTTKPF 129 Query: 108 -FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG------ADGLFLHLNP-LQEI 159 F+L ++NL A + + +LG +GL + P L+ + Sbjct: 130 WFQL-YMMKDRKFMANLIASAKHAGCSALVLTADLQMLGDRHADIKNGLTVPPKPTLKNL 188 Query: 160 IQ------------PNGNTNFADLSSK--------------------------IALLSSA 181 I N F ++ + + + Sbjct: 189 INLSTKVPWCLNMLKTSNRTFGNIVNHAANEGGFASLGKWTNEQFDLSLNWHDVEWVQKQ 248 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + +++K + + + D + +G ++ GG S + +I Sbjct: 249 WNGSMIIKGI---MDTQDAIMAQNTGADAIIVSNHGGRQLDGAPSSISVLEEI------- 298 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 + + + G+R+G D+LK+ LGA+ G + P + Sbjct: 299 ----------IDAVDRKLEVLIDSGIRSGQDLLKAKALGATAGLIGRPMVYGLGAYGEQG 348 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 349 AYRVLEIFYQEMDKTMAFCGHTNIN 373 >gi|331697829|ref|YP_004334068.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] gi|326952518|gb|AEA26215.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] Length = 392 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +K + D + +G ++ GG + + L Sbjct: 239 WEDIAWLRQEWGGPFAVKGITH---PDDARRAVDAGATAISVSNHGGNNLDGTPAAIRLL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 296 PAV-----------------VDAVGDQVEVLMDGGIRRGGDVVKALALGARAVLIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR+ ++ LG + EL + +I Sbjct: 339 WGMAANGEAGVANVLQILRQGIDSALLGLGRSSIHELSRDDLVI 382 >gi|126735037|ref|ZP_01750783.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. CCS2] gi|126715592|gb|EBA12457.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. CCS2] Length = 387 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +++A L P++LK + L D + + G ++ GG S Sbjct: 235 WNRVAELMKMWGGPVILKGI---LDVEDAKKAAELGADAIIVSNHGGRQLDGALSSIRAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + G+R+G D+LK++ +GA + F+ Sbjct: 292 PAIMD-----------------AVGDKVEVHLDSGIRSGQDVLKALAMGAKGTYIGRAFV 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V A+E + KE +M L G + V+EL + L+ Sbjct: 335 NGLGAMGEKGVKTALEVIHKELDTTMALCGRRDVKELDRDILLV 378 >gi|118464771|ref|YP_882919.1| lactate 2-monooxygenase [Mycobacterium avium 104] gi|118166058|gb|ABK66955.1| lactate 2-monooxygenase [Mycobacterium avium 104] Length = 386 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 117/361 (32%), Gaps = 68/361 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N++ FD W LI R + E D SV+ G L P+ ++ + G G Sbjct: 49 AGDERTQRANREAFDRWGLIPRMF--VGAAERDLSVQMFGLTLPSPVFMAPI-GVIGICA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFEL 110 + A AA T V M V + Q D S Sbjct: 106 QDGHGDLATARAAAATGVPMVVSTLTADPMEDVAAQFGDTPGFFQLYTPKDRELAASLVH 165 Query: 111 RQYAP--HTVLIS-----------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 R A ++++ +L G+ ++ + L P + Sbjct: 166 RAEAAGFKGIIVTLDTWIPGWRPRDLSTANFPQLRGMCLSNYTSDPVFRAALAR---PPE 222 Query: 158 EIIQPNGNTNFADL-----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 E Q + + L S D+PL++K + D G+ Sbjct: 223 EDPQGTVLQWISTFGNPLTWDDLPWLRSLTDLPLIIKGICH---PDDARRARDGGVDGIY 279 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 + GG + G+P L + + G+R+G D Sbjct: 280 CSTHGGRQ------------------ANGGLPALDCLPGVVEAADGLPVLFDSGIRSGAD 321 Query: 273 ILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 ++K++ LGA+ G+ P+ A+ D +V + S+ E + M + G ++L +T Sbjct: 322 VVKALALGATAVGIGRPYAYGLALGGVDGIVHVLRSILAEADLIMAVDGYPTRKDLTPDT 381 Query: 332 A 332 Sbjct: 382 L 382 >gi|39937380|ref|NP_949656.1| L-lactate dehydrogenase [Rhodopseudomonas palustris CGA009] gi|192293160|ref|YP_001993765.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris TIE-1] gi|39651238|emb|CAE29761.1| L-lactate dehydrogenase [Rhodopseudomonas palustris CGA009] gi|192286909|gb|ACF03290.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris TIE-1] Length = 379 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 124/376 (32%), Gaps = 86/376 (22%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TG 66 DH + + + N R L + + D + LG + PL+++ + + Sbjct: 27 DHGSYA--EETLRANVDDLKRIKFRQRIL--VDISKRDLATTILGDTYAMPLILAPVGST 82 Query: 67 GNNKMIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPH 116 G I+ AA+ + M++ S + ++ F+L R +A Sbjct: 83 GMQHADGEIHA--CRAAQAAGIPYTLSTMSICSIEDVAANVEKPFWFQLYVMRDRGFAKA 140 Query: 117 TV---LISNLGAVQLNYDFGV---------------QKAHQAVHVLGADG---------- 148 + + + A+ L D V + + +V+ Sbjct: 141 LIERAIAAKCSALVLTVDLQVIGQRHQDIKNGMTVPPQLFKLKNVIDIATKPRWVKGILG 200 Query: 149 --------LFLHLNPLQEI--------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + HL +++ Q + + N+ D I + S L++K + Sbjct: 201 TPRRNFGNIAGHLPGSKDLESVSAWVASQFDASLNWRD----IDWIRSIWPGKLIIKGI- 255 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 L D +K G ++ GG S ++ +I Sbjct: 256 --LDVEDAREAVKVGAEALVVSNHGGRQLDGAPSSIEVLPEI-----------------V 296 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKE 311 + + + GG+R+G D+++++ LGA + ++ V AI+ + KE Sbjct: 297 HTVGSHIEVMFDGGIRSGQDVMRALALGAKSCMIGRAYIYGLGAYGGPGVAKAIDIIGKE 356 Query: 312 FIVSMFLLGTKRVQEL 327 +M L G + E+ Sbjct: 357 LSTTMGLCGVNSIHEI 372 >gi|115613160|ref|XP_001180748.1| PREDICTED: similar to Hao1 protein [Strongylocentrotus purpuratus] gi|115932344|ref|XP_001179852.1| PREDICTED: similar to Hao1 protein [Strongylocentrotus purpuratus] Length = 337 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 109/336 (32%), Gaps = 65/336 (19%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKMIER----------- 74 + + +R L IS S LG+++ +P+ I+ + Sbjct: 6 YRIRNRVLQGISHR--SLSTTVLGEQIQYPIGIAPTAVHAAAHPDAEAETARGAAAADTL 63 Query: 75 ----INRNLAIA----AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 ++ + AIA A + Q +F D + + + A + + V Sbjct: 64 MVLSVDSHTAIADVSAAAPGGLRWM---QTYLFKDRLLTQ--HIVREAERAGFKALVITV 118 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLN-----PLQEIIQPNGNT-----------NFAD 170 K A++ A F N P + G+T N + Sbjct: 119 DSPVSGLDSKVRAALNKDAAIFAFRMSNFEADIPSSRAAKAEGDTRYVKYVHQMQYNDSA 178 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I + S ++P++ K + +S+ +G+ ++ GG + D Sbjct: 179 TWEDIRWIKSITNLPIVCKGI---VSADSAREAADAGVDGILVSAHGGRQSDVAPAPIDA 235 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +++ + GI + GG+R G D+ K++ GA + P Sbjct: 236 LAEVVDAVRGRGI----------------EVYMDGGIRTGTDVFKALGRGARAVFVGRPI 279 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 L A S V + +E LR E ++ + G Sbjct: 280 LWGLACQGSKGVSSILEILRSELDNALAISGCTSPA 315 >gi|11095232|gb|AAG29798.1| dehydrogenase [Streptomyces rishiriensis] Length = 389 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 18/138 (13%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 V L + D E + G ++ GG + D I Sbjct: 261 VKGILDADDAERAVSLGADGIIVSNHGGRQLDGAPATLDALPGIADRLA----------- 309 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLR 309 + A + GG+R G D++K++ LGA + P L + V + LR Sbjct: 310 ------HRATVLIDGGIRRGTDVVKALCLGADGCLIGRPALYGLAVGGESGVEHVLSILR 363 Query: 310 KEFIVSMFLLGTKRVQEL 327 +E ++ L+G + +L Sbjct: 364 EEIDRTLALMGCSDIADL 381 >gi|41409057|ref|NP_961893.1| hypothetical protein MAP2959c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397416|gb|AAS05276.1| hypothetical protein MAP_2959c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 386 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 118/361 (32%), Gaps = 68/361 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N++ FD W LI R + E D SV+ G L P+ ++ + G G Sbjct: 49 AGDERTQRANREAFDRWGLIPRMF--VGAAERDLSVQMFGLTLPSPVFMAPI-GVIGICA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFEL 110 + A AA T V M V + Q D S Sbjct: 106 QDGHGDLATARAAAATGVPMVVSTLTADPMEDVAAQFGDTPGFFQLYTPKDRELAASLVH 165 Query: 111 RQYAP--HTVLIS-----------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 R A ++++ +L G+ ++ + L P + Sbjct: 166 RAEAAGFKGIIVTLDTWIPGWRPRDLSTANFPQLRGMCLSNYTSDPVFRAALAR---PPE 222 Query: 158 EIIQPNGNTNFADL-----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 E Q + + L S D+PL++K + D G+ Sbjct: 223 EDPQGTVLQWISTFGNPLTWDDLPWLRSLTDLPLIIKGICH---PDDARRARDGGVDGIY 279 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 + GG + G+P L + + G+R+G D Sbjct: 280 CSTHGGRQ------------------ANGGLPALDCLPGVIEAADGLPVLFDSGIRSGAD 321 Query: 273 ILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 ++K++ LGA+ G+ P+ A+ D +V A+ S+ E + M + G ++L +T Sbjct: 322 VVKALALGATAVGIGRPYAYGLALGGVDGIVHALRSILAEADLIMAVDGYPTRKDLTPDT 381 Query: 332 A 332 Sbjct: 382 L 382 >gi|218194683|gb|EEC77110.1| hypothetical protein OsI_15533 [Oryza sativa Indica Group] Length = 363 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 107/362 (29%), Gaps = 79/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N + F L R ++ + G+ ++ P+ I+ TG G Sbjct: 13 ESTYRANSEDFQKIKLRQRV--AVNMENRTTRTTMAGQDVAMPVAIAP-TGLTGMQHADG 69 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISN- 122 I A AA V + + + + A F++ R + + + Sbjct: 70 EILG--ARAARAFGVPFTLSTMSICSIEDVAEHAGPGFWFQVYVMRDRDFVERLIDRARA 127 Query: 123 --LGAVQLNYDFGVQKAHQAVHVLG----------ADGLFLHLNPLQEIIQPNG-NTNFA 169 + A+Q+ D + + + A+ L L P + +F Sbjct: 128 AGVSALQVTLDLQI-LGQRHKDIRNGLSTPPRPTLANLLDLATKPRWCLGMLGTKRRSFG 186 Query: 170 DLSSK--------------------------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ I + L+LK + + + D L Sbjct: 187 NIVGHAKGVGDLSSLSSWTAEQFDPRLNWRDIEWIKKRWGGKLILKGI---MDADDARLA 243 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +++G ++ GG S I + + Sbjct: 244 VETGADAIVVSNHGGRQLDGAPSSIHALPAI-----------------VDAVGRDIEVWM 286 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK+ LGA + FL V A++ + KE ++M G Sbjct: 287 DGGIRGGQDVLKAWALGARGTLIGRSFLYGLGAFGEAGVTRALQIIHKELDITMAFCGHT 346 Query: 323 RV 324 + Sbjct: 347 DI 348 >gi|183981829|ref|YP_001850120.1| L-lactate dehydrogenase (cytochrome) LldD1_1 [Mycobacterium marinum M] gi|183175155|gb|ACC40265.1| L-lactate dehydrogenase (cytochrome) LldD1_1 [Mycobacterium marinum M] Length = 386 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 115/367 (31%), Gaps = 80/367 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + FD W L+ R + E D +VE G L P+ ++ + G G Sbjct: 49 AGDERTQRANCEAFDRWGLMPRMF--VGAAERDLTVEMFGLTLPSPIFLAPI-GVIGLCA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V M V + + A + L + Sbjct: 106 QDGHGDLATARAAARTGVPMVVSTLTADPMEDVAAE-------FGDIPGFFQLYTP-KDR 157 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN------------------------------------ 154 + +A G G+ + L+ Sbjct: 158 ELAASLVQRA-ESAGFKGIVVTLDTWIPGWRPRDLSTANFPQLRGHCLSNYTSDPVFRAG 216 Query: 155 ---PLQEIIQPNGNTN---FADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 P +E Q F + + +A L D+PL++K + D Sbjct: 217 LPRPPEEDPQGTVLRWAQLFGNPLTWSDLAWLRELTDLPLIVKGICH---PDDARRAKDG 273 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ + GG + G+P L + + G Sbjct: 274 GVDGIYCSTHGGRQ------------------ANGGLPALDCLPGVVEAADGLPVLFDSG 315 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G DI+K++ +GA+ G+ P+ A+ D VV + L E + M + G + Sbjct: 316 IRSGADIIKALAMGATAVGIGRPYAYGLALGGVDGVVHVLRMLLAEADLIMAVDGYPTRK 375 Query: 326 ELYLNTA 332 +L +T Sbjct: 376 DLTPDTL 382 >gi|83953529|ref|ZP_00962251.1| L-lactate dehydrogenase, putative [Sulfitobacter sp. NAS-14.1] gi|83842497|gb|EAP81665.1| L-lactate dehydrogenase, putative [Sulfitobacter sp. NAS-14.1] Length = 388 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 117/374 (31%), Gaps = 83/374 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTTDFEQIRLRQRV--AVDMSGRSTKTQMIGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI----- 120 I A AAE V + + + + A + + +R LI Sbjct: 90 EI--KAARAAEAFGVPFTLSTMSINSIEDVAEATTKPFWFQLYTMRDEDYVARLIQRAKD 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN-----TN 167 + A+ + D ++ A L A L N + G + Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTAKTLA---NLATKWSWGIGMMGAKRRS 204 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F ++ KIA L ++LK + L + D Sbjct: 205 FGNIVGHVHGVDDTANLGAWTAEQFDPTLDWGKIAKLKEQWGGKVILKGI---LDADDAR 261 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + LK G ++ GG S S+ A ++ + Sbjct: 262 MALKVGADAIIVSNHGGRQLDGAISSIRALP---------------SILEA--VGDQIEV 304 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G+R+G D+LK++ +GA + F+ V +A+E + KE +SM L G Sbjct: 305 HLDSGIRSGQDVLKAMAMGAKGTYIGRAFIYGLGAMGQAGVTSALEVIHKELDLSMALCG 364 Query: 321 TKRVQELYLNTALI 334 V L + LI Sbjct: 365 ETSVAGLGKHNLLI 378 >gi|288919783|ref|ZP_06414108.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] gi|288348791|gb|EFC83043.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] Length = 430 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L D P +LK V D +G+ ++ GG + + Sbjct: 237 WDDIAWLRQQWDGPFMLKGVSR---VDDALRARDAGVSAISVSNHGGNNLDSTPAPIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + + + G+R G D++K++ LGA + +L Sbjct: 294 RAV-----------------VEAVGGDIEVVMDSGIRRGGDVVKALALGARAVMIGRAYL 336 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + +L + LI Sbjct: 337 WALAANGQAGVENVLDVLRNGIDSALLALGHSSIHDLTPDDVLI 380 >gi|328880232|emb|CCA53471.1| Lactate 2-monooxygenase [Streptomyces venezuelae ATCC 10712] Length = 406 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + +A L S D+P++LK + D+ G+ + GG Sbjct: 259 VWDDLAWLRSLTDLPIVLKGICH---PEDVRRARDGGVDGIYCSNHGGRQ---------- 305 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+P +L + + G+R+G D++K++ LGA+ G+ P+ Sbjct: 306 --------ANGGLPALDALPGVVAAADGLPVLFDSGVRSGADVVKALALGATAVGVGRPY 357 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+ +D +V + SL E + M + G + +L AL Sbjct: 358 AYGLALGGTDGIVHVLRSLLAEADLIMAVDGYPALADLRAEGAL 401 >gi|167571866|ref|ZP_02364740.1| dehydrogenase, FMN-dependent family protein [Burkholderia oklahomensis C6786] Length = 392 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 127/378 (33%), Gaps = 78/378 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L + +VE G++ + P I+ M G + + Sbjct: 40 AEDNRTRDDNRAVFDEYGFVTRVL--CDVSQRQQAVELFGQRFASPFGIAPM-GIHALSV 96 Query: 73 ERINRNLAIAAEKTKV-AMAVG--------------------------SQRVMFSDHNAI 105 R + LA AA++ + ++ G S+ + A Sbjct: 97 YRGDVVLAHAAQRAGIVSIMSGSSLIPLEEVAAAAPGTWFQAYLPGDASRIRALLERVAR 156 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHV----------LGADGLFLHLN 154 + + +N V+ + ++ + + A L H Sbjct: 157 AGYRTLVITVDIPVSANRENNVRTGFSTPLRPSLRLFWDGLTRPSWLLGTFARTLLKHGM 216 Query: 155 PLQE---------IIQPNGNTNFA-----DLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 P E I+ N +F+ + + + + L++K + LS D Sbjct: 217 PHFENSFATRGAPILSANVLRDFSARDHLNW-THVRQIRRQWTGDLVIKGI---LSVEDA 272 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + ++G ++ GG S + D+ + + Sbjct: 273 VIAREAGADGIILSNHGGRQLDGASSPMRILRDV-----------------VQTVGGDYP 315 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + G R G D+LK++ LGA + + PF A+ V AI L++E +M +L Sbjct: 316 VMIDSGFRRGSDVLKALALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLQEEVDRNMAML 375 Query: 320 GTKRVQELYLNTALIRHQ 337 G +L LIR + Sbjct: 376 GANGCGQL-TPDMLIRKR 392 >gi|167743241|ref|ZP_02416015.1| putative L(+)-mandelate dehydrogenase [Burkholderia pseudomallei 14] Length = 407 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 112 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 392 ANGCDAL-TPDMLIRKR 407 >gi|167828787|ref|ZP_02460258.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei 9] gi|167898847|ref|ZP_02486248.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei 7894] gi|167907167|ref|ZP_02494372.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei NCTC 13177] Length = 407 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 112 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 392 ANGCDAL-TPDMLIRKR 407 >gi|53716278|ref|YP_106149.1| FMN-dependent family dehydrogenase [Burkholderia mallei ATCC 23344] gi|53722581|ref|YP_111566.1| L(+)-mandelate dehydrogenase [Burkholderia pseudomallei K96243] gi|167820418|ref|ZP_02452098.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei 91] gi|167850244|ref|ZP_02475752.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei B7210] gi|167915531|ref|ZP_02502622.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei 112] gi|52212995|emb|CAH39033.1| putative L(+)-mandelate dehydrogenase [Burkholderia pseudomallei K96243] gi|52422248|gb|AAU45818.1| dehydrogenase, FMN-dependent family [Burkholderia mallei ATCC 23344] Length = 407 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA+ +A + GS + D A ++ + + Sbjct: 112 YRGDIVLARAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 392 ANGCDAL-TPDMLIRKR 407 >gi|167840207|ref|ZP_02466891.1| dehydrogenase, FMN-dependent family protein [Burkholderia thailandensis MSMB43] Length = 407 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 134/378 (35%), Gaps = 78/378 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYAFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALSA 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + LA AA++ +A + GS + D A ++ + + Sbjct: 112 YRGDVVLARAAQRAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERIAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRTGFSTPLRPSPRLFWDGLTRPRWLLRTFARTLLTHGM 231 Query: 155 PLQE---------IIQPNGNTNFA-----DLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 P E I+ N +F+ + + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLNW-AHVRQIREQWTGELVIKGV---LSVDDA 287 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + ++G ++ GG S + D+ + + Sbjct: 288 LITREAGADGIILSNHGGRQLDGAVSPMRVLRDV-----------------VQAVGDGYP 330 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +L Sbjct: 331 VMIDSGFRRGSDVLKALALGARMVFIGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAML 390 Query: 320 GTKRVQELYLNTALIRHQ 337 G ++L LIR + Sbjct: 391 GVNGCEQL-TPDVLIRKR 407 >gi|262044168|ref|ZP_06017241.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038506|gb|EEW39704.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 313 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L + D ++ G ++ GG Sbjct: 153 WHDLEWIRDSWQGKLIIKGI---LDADDARNAVRLGADGIVVSNHGGRQLDGA------- 202 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L + ++ +A G+R+GVD+++ + LGA L + Sbjct: 203 -----------IPTARALPRVVDAVGDDLTVLADSGVRSGVDVIRLLALGAKGVLLGRAY 251 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A V + ++ V+M L G + L+ Sbjct: 252 IYALAAAGEAGVAHLLRLFAEDMKVTMTLTGATSPSAISLD 292 >gi|152980344|ref|YP_001353278.1| L-lactate dehydrogenase (cytochrome) [Janthinobacterium sp. Marseille] gi|151280421|gb|ABR88831.1| L-lactate dehydrogenase (cytochrome) [Janthinobacterium sp. Marseille] Length = 381 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 112/359 (31%), Gaps = 71/359 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N F R ++ + +G+++ P+ I+ TG G Sbjct: 33 ESTYRANSSDFAPMKFRQRV--AVNMENRTLKTTMVGQEVHMPVAIAP-TGLTGMQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVL--------I 120 I A AAEK V + + + + A + F+L + + Sbjct: 90 EILA--ARAAEKFGVPFTLSTMSICSIEDIAANTSKPFWFQLYVMKDRPFIERLIERAKV 147 Query: 121 SNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFAD 170 + A+ L D + Q+ + L A N + + +P +F + Sbjct: 148 AKCSALVLTLDLQILGQRHKDLKNGLSAPPKLTVANIVNMMTKPRWCMGMLGTKRRSFGN 207 Query: 171 LSSKIALLS----------SAMDVPLLLKEVGCG-------------LSSMDIELGLKSG 207 + + +S D+ L K+V + + D L + SG Sbjct: 208 IVGHASDVSDMSSLSSWTSQQFDLALSWKDVEWIKRCWGGKLIIKGIMDAEDARLAVASG 267 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S I ++ + GG+ Sbjct: 268 ADAIIVSNHGGRQLDGALSSIAALPSI-----------------VEAVGDQIEVHMDGGI 310 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 R+G D++K++ LGA + FL + V ++ + E ++M G V+ Sbjct: 311 RSGQDVIKALALGAKGTYIGRSFLYGLGAMGEEGVTKCLKIIENELDLTMAFCGLTDVK 369 >gi|120402308|ref|YP_952137.1| (S)-2-hydroxy-acid oxidase [Mycobacterium vanbaalenii PYR-1] gi|119955126|gb|ABM12131.1| (S)-2-hydroxy-acid oxidase [Mycobacterium vanbaalenii PYR-1] Length = 391 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L P LLK + D + + +G+ ++ GG + + Sbjct: 238 WEDVAWLREQWGGPFLLKGT---VRVDDAKRAVDAGVSAITVSNHGGNNLDGTPAAIRCL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAD-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 337 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + EL LI Sbjct: 338 WGLAANGQAGVENVLDILRGGIDSALMGLGKSSIHELTREDILI 381 >gi|83717219|ref|YP_439010.1| FMN-dependent family dehydrogenase [Burkholderia thailandensis E264] gi|167615557|ref|ZP_02384192.1| dehydrogenase, FMN-dependent family protein [Burkholderia thailandensis Bt4] gi|257142117|ref|ZP_05590379.1| FMN-dependent family dehydrogenase [Burkholderia thailandensis E264] gi|83651044|gb|ABC35108.1| dehydrogenase, FMN-dependent family [Burkholderia thailandensis E264] Length = 407 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L + VE G++ + P I+ M G + Sbjct: 55 AEDNRTRDDNRAVFDEYGFVTRVL--RDVSQRRQGVELFGRRYASPFGIAPM-GIHALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSDHNAIK---SFE----------------LRQ 112 R + LA AA++ +A + GS + D A F+ + + Sbjct: 112 YRGDVVLARAAQRAGIASIMSGSSLIPLEDVAAAAPGTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLRTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRRIREQWTGELVIKGV---LSVDDAL 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + + Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGDGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIALLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 ++L LIR + Sbjct: 392 VNSCEQL-SPDVLIRKR 407 >gi|289669775|ref|ZP_06490850.1| L-lactate dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 193 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 24/175 (13%) Query: 156 LQEII-QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 LQ+ I N + + + + P+++K + L D ++ G ++ Sbjct: 22 LQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGI---LDPEDARDAVRFGANGIVVS 78 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDI 273 GG + + + +L +A E + +A G+R+G+D+ Sbjct: 79 NHGGRQLDGV------------------LSSARALPAIADAVKGELKILADSGIRSGLDV 120 Query: 274 LKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + LGA L F+ A V + + KE V+M L GT + E+ Sbjct: 121 VRMLALGADAVLLGRAFVYALAAAGQAGVENLLTLIEKEMRVAMTLTGTHSIAEI 175 >gi|332878621|ref|ZP_08446340.1| putative L-lactate dehydrogenase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683396|gb|EGJ56274.1| putative L-lactate dehydrogenase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 391 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 107/369 (28%), Gaps = 88/369 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 N F+ + L + D LGKK+ FP +MT G Sbjct: 36 QATYRDNVSDFNPIKFKQKIL--VDMDNRTLESTLLGKKVKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R++ + Sbjct: 90 ADGEI--HMAKAAQKFGIPFTLSTMSICSIEDLAEAGVEPFWFQLYVMRDREFMKDLIRR 147 Query: 121 SN---------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + LG + G+ + + L + I N Sbjct: 148 AKEAKCSALMVTVDLQVLGNRHRDIKNGLSTPPK-FTIPNIINLSTKIPWGMRYIFGNRR 206 Query: 166 TNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F ++ IA + P++LK + ++ D Sbjct: 207 WTFRNIAGHAKNVSDLSSLSSWTKEQFDPSLSWKDIAEIKELWGGPIILKGI---MTPED 263 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNE 258 +K G ++ GG I + +L ++ ++ Sbjct: 264 AMDAVKYGADAIIVSNHGGRQMDDT------------------ISSIKALPDIVSAVGSQ 305 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G G ++LK+ +GA L P + V A++ L E +M Sbjct: 306 TEVWIDSGFYTGQNMLKAWAMGARGIMLGRAPVYGLGAYGEEGVTRALQILYDEMDTTMA 365 Query: 318 LLGTKRVQE 326 G + +Q+ Sbjct: 366 FSGHRNLQD 374 >gi|269928770|ref|YP_003321091.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphaerobacter thermophilus DSM 20745] gi|269788127|gb|ACZ40269.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphaerobacter thermophilus DSM 20745] Length = 409 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 107/337 (31%), Gaps = 79/337 (23%) Query: 45 DPSVEFLGKKLSFPLLISS-----------------------MTGGNNKMIERINRNLAI 81 D + LG+++SFP++IS + G ++ + I +A Sbjct: 64 DLTTTVLGEEISFPVIISPTGVQAVHPDAEVAVARASAAAGTIMGLSSFASKPIEEVVAA 123 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIK-------------SFELRQY--APHTVLISNLGAV 126 +GS+ M + K SF+ R+ +P NL A+ Sbjct: 124 NPRTFFQIYWLGSRDDMLHYLDRAKRAGAKGLIVTLDWSFDTRRDWGSPWIPERLNLEAL 183 Query: 127 QLNYDFGVQKAHQAV--------HVLGADGLFLHLNPLQEIIQPNGNTNFADL------- 171 G+ + L L L P P +A Sbjct: 184 LRYAPQGITHPRWTLSFLRRGGLPDLTVPNLALPGKPA-----PTFFGAYATWMQTPLPT 238 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L D P ++K V + D ++ G ++ GG + + Sbjct: 239 WEDIAWLRKQWDGPFIIKGV---MLPEDARRAVEIGADAISVSNHGGNTLDGTPASIRAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 296 PAI-----------------VEAVGDQIEVLLDGGIRRGSDVVKALALGARAVMIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V ++ LR ++ +G V++L Sbjct: 339 WGLAANGEAGVRNVLDILRNGIDTTLIGIGRASVRDL 375 >gi|288934921|ref|YP_003438980.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|290509063|ref|ZP_06548434.1| L-lactate dehydrogenase lldD [Klebsiella sp. 1_1_55] gi|288889630|gb|ADC57948.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Klebsiella variicola At-22] gi|289778457|gb|EFD86454.1| L-lactate dehydrogenase lldD [Klebsiella sp. 1_1_55] Length = 394 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 110/369 (29%), Gaps = 75/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++ N L R L E + L + P+ + + G Sbjct: 29 AVAENTMNANATELASVALRQRVL--CGAGEPTLATTILDASWAMPVALGPV-GATGMYA 85 Query: 73 ERINRNLAIAAEKTKVAM-------------------AVGSQRVMFSDHNAIKSFELRQY 113 R A AA + + A+ SQ + D +++ R + Sbjct: 86 RRGEVQAARAASRAGIPYTLSTVSVCSIEEVASQASGALWSQLYVLKDRGYMRNALERAW 145 Query: 114 A----------------------------PHTVLISNLGA-VQLNYDFGVQKAHQAVHVL 144 A PH L L A + V A + + Sbjct: 146 AAGMKTLVFTVDMPIPGSRYRDNRSGMSGPHATLRQYLQACTHPRWAMNVGLAGRPLSFG 205 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + H + + + N ++ + + + L++K + L + D Sbjct: 206 NIEAYTGHKMTMDDYMGFISNNFDPSIAWHDLEWIRDSWQGKLIIKGI---LDADDARNA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG IPT +L + ++ + Sbjct: 263 VRLGADGIVVSNHGGRQLDGA------------------IPTARALPRVVDAVGDDLTVL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+R+GVD+++ + LGA L ++ A V + ++ V+M L G Sbjct: 305 ADSGVRSGVDVIRLLALGAKGVLLGRAYIYALAAAGEAGVAHLLRLFAEDMKVTMTLTGA 364 Query: 322 KRVQELYLN 330 + L+ Sbjct: 365 TSPSAISLD 373 >gi|6453563|emb|CAB61335.1| glycolate oxidase [Laminaria digitata] Length = 239 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 25/169 (14%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + + +M +++K V +++ D ++ G+ I+ G + + Sbjct: 88 NDIKWLRTICGSMK--IVVKGV---MTAEDASEAVRQGVDGIWISNHGARQLDTTPATIE 142 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ + + GG+ G D+ K+I LGA + P Sbjct: 143 VLPEV-----------------VQAVSGRCEVYLDGGICRGTDVFKAIALGAKAVFIGRP 185 Query: 290 FLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 L + V ++ L E I+++ L G R+ A++ HQ Sbjct: 186 VLWGLGHSGEEGVSKVLKLLNDELIMALQLTGCTRISA--ATRAMVTHQ 232 >gi|91789525|ref|YP_550477.1| L-lactate dehydrogenase (cytochrome) [Polaromonas sp. JS666] gi|91698750|gb|ABE45579.1| L-lactate dehydrogenase (cytochrome) [Polaromonas sp. JS666] Length = 383 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 114/364 (31%), Gaps = 81/364 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F L R ++ + + +G ++ P+ I+ + TG + E Sbjct: 33 ESTYRANESDFQKIKLRQRV--AVNMENRSTATRMVGLDVTMPVAIAPVGLTGMQHADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQ------------- 112 + A AAEK + + + + + A + + +R Sbjct: 91 ILA---AKAAEKFGIPFILSTMSICSIEDIAAHTQSPFWFQLYMMRDRDAMAAMIERARK 147 Query: 113 --------------------------YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 AP ++N+ + + + A H G Sbjct: 148 ARCTALVLTLDLQVIGQRHKDLKNGLTAPPKPTLANIINLMTKPRWCLGMAGTKRHTFG- 206 Query: 147 DGLFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L H+ + ++ N + + +A + L+LK + D +L Sbjct: 207 -NLVGHVKGVSDMRSLSAWTNEQFDPRLSWADVAWVKERWGGKLILKGIQ---DVEDAKL 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++SG ++ GG +S + I + Sbjct: 263 AVQSGADAIVVSNHGGRQLDGAQSSIEALPAI-----------------VDAVGANIEVW 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGT 321 GG+R+G D+LK+ LGA + + +A V A++ + KE ++M G Sbjct: 306 MDGGIRSGQDVLKAWALGARGTLIGRAMVYGLGAMGEAGVTKALQIIHKELDITMAFCGR 365 Query: 322 KRVQ 325 + Sbjct: 366 TDIN 369 >gi|260063330|ref|YP_003196410.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Robiginitalea biformata HTCC2501] gi|88783424|gb|EAR14596.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Robiginitalea biformata HTCC2501] Length = 380 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 116/369 (31%), Gaps = 81/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D + RN + + L R + + E+D S E G + PL ++ + + + Sbjct: 33 CNEDINLHRNTEELREVQLEPRYIRKTG--EIDTSCELFGHRYDMPLGVAPV---GLQGL 87 Query: 73 ERIN--RNLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSFELRQYAP-HTVLISNLG 124 N LA AA + + + + F+L Y P + ++ Sbjct: 88 MWPNAPEILARAALRHNLPFILSTVTTTDIERAAELTEGRAWFQL--YNPVDPEIRQDII 145 Query: 125 AVQLNYDFGVQKAHQAVHVLGA------DGLFLH-----LNPLQ---------------- 157 + V V G +GL L N LQ Sbjct: 146 RRAGDAGCPVLVLLCDVPTFGYRPRDIKNGLALPPKMSLTNILQVLGKPRWALQTLRYGQ 205 Query: 158 ---EII---QPNGN----------TNFADLSS--KIALLSSAMDVPLLLKEVGCGLSSMD 199 E + P G F+ L KI + L+LK V S D Sbjct: 206 PTFETVKPYMPGGMNLRQLGAFMNRTFSGLLDAEKIKPIRDQWKGKLVLKGVA---SEWD 262 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + ++ G ++ GG ES + + ++D + Sbjct: 263 AQQAVQLGFDGIIVSNHGGRQLDAGESTIRPLARLAANYRD-----------------KL 305 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFL 318 + GLR+G D+ +++ GA + F+ + + L+ +F M Sbjct: 306 TVMVDSGLRSGPDVARAMACGADFTFMGRSFMYGVGALGAKGGDHTMSMLKTQFRQVMDQ 365 Query: 319 LGTKRVQEL 327 L +RV++L Sbjct: 366 LCCERVEDL 374 >gi|73541351|ref|YP_295871.1| L-lactate dehydrogenase (cytochrome) [Ralstonia eutropha JMP134] gi|72118764|gb|AAZ61027.1| L-lactate dehydrogenase (cytochrome) [Ralstonia eutropha JMP134] Length = 415 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 120/365 (32%), Gaps = 65/365 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ FD R L + + E G++ + P I+ + G + Sbjct: 66 AEDEKSLAANRSAFDAVRFRPRVL--VDVSGRSQATEIFGQRYASPFGIAPV-GISAIAA 122 Query: 73 ERINRNLAIAAEKTKV-AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R + LA AA ++ A+ G+ + E+ AP T + L L D Sbjct: 123 YRGDVVLAQAARDAQIPAIMSGTSLIPME--------EVHAAAPGTWFQAYLPGDALRRD 174 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA---------------DLSSKIA 176 +++ A G L L ++ + N N D S+ Sbjct: 175 ALIERICAA----GFGTLVLTVDIP---VWANRENNVRTGFSLPLRPSVRLAFDGVSRPR 227 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF-DIAGRGGTSWSRIESHRD------ 229 L+ LL + +S D GR +W IE R Sbjct: 228 WLAGTFARTLLTSGMPHFENSFATRGAPILSASAIRDTTGRDHLNWIDIERIRQRWPGNL 287 Query: 230 --------LESDIGIVFQDWGI---------------PTPLSLEMARPYCNEAQFIASGG 266 +++ + GI P + E+ + + G Sbjct: 288 VIKGILHKADAERAVALGADGIIVSNHGGRQLDGAVEPLAVLPEICDSVGHNTAVMMDSG 347 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA L PF+ A + + V AI LR E +M +LG V Sbjct: 348 IRRGGDVLKALALGARFVFLGRPFIYAASVGGPEGVCHAITLLRDEVDRNMAMLGANTVA 407 Query: 326 ELYLN 330 ++ + Sbjct: 408 DVNRS 412 >gi|39941648|ref|XP_360361.1| hypothetical protein MGG_05735 [Magnaporthe oryzae 70-15] gi|145022440|gb|EDK06460.1| hypothetical protein MGG_05735 [Magnaporthe oryzae 70-15] Length = 437 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 62/377 (16%), Positives = 119/377 (31%), Gaps = 82/377 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F +W L+ R L + D V+ G + PL+++ + G + Sbjct: 76 AGAEETVTANRVAFGNWRLVPRLLRPTAPR--DLGVKLFGTRYDNPLVMAPV--GVQEAY 131 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISN 122 +R L A A + V V + + A S ++L + S Sbjct: 132 HE-DRELGTARACAELGVPFCVSTAASSTVEEIAEASSGSSAGLWYQLYWPLDDEITASL 190 Query: 123 LGAV----------------------QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ--- 157 LG L+ F + +D +F Q Sbjct: 191 LGRARRAGCRVLLVTLDTHSMSWRPRDLDRGFIPFAVGSGNAMGFSDPVFRRKFAAQVNE 250 Query: 158 ------EIIQPNGNTN----------FADLSSKIALLSSAMDV-----PLLLKEVGCGLS 196 ++ P GN F+ + + L+ + P++LK + LS Sbjct: 251 GGEEDEDLATPEGNPIAASLAWTAEVFSGYAHRWTELAKLRRMWGEGNPIVLKGI---LS 307 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D L L+ G+ ++ GG + D+ +I Sbjct: 308 VEDARLALEYGMDGIVVSNHGGRQLDGAIAALDVLPEI-----------------VDAVG 350 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVS 315 + G+R+G D++ ++ LGA + P + + + + S+ + S Sbjct: 351 GNMTVLFDSGVRSGADVINALCLGAKGVLVGRPVIYGLGIAGKEGAQHVLASILADLDQS 410 Query: 316 MFLLGTKRVQELYLNTA 332 M L G + EL + Sbjct: 411 MGLAGVNNIGELTRDRL 427 >gi|192359218|ref|YP_001981627.1| L-lactate dehydrogenase [Cellvibrio japonicus Ueda107] gi|190685383|gb|ACE83061.1| L-lactate dehydrogenase [Cellvibrio japonicus Ueda107] Length = 386 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 N + + I + S D ++K + L + D G ++ GG Sbjct: 232 WLGNNFDPRVTWADIDRIRSEWDGHFVIKGI---LDAEDARQAKSIGCDGLIVSNHGGRQ 288 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 S I N+ I G+R+G+DI++++ LG Sbjct: 289 LDGALSSIKALPAIAD-----------------AVGNDLSLILDSGIRSGLDIVRALALG 331 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + + P++ A V ++ +E V+M L G R++++ A++ Sbjct: 332 ARMVMIGRPWVYALAARQKKGVEEILDIFARELRVAMALSGCTRLEDI--TPAIL 384 >gi|225025020|ref|ZP_03714212.1| hypothetical protein EIKCOROL_01909 [Eikenella corrodens ATCC 23834] gi|224942250|gb|EEG23459.1| hypothetical protein EIKCOROL_01909 [Eikenella corrodens ATCC 23834] Length = 423 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 109/365 (29%), Gaps = 83/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F R L + + + +G+ + PL ++ + TG + E Sbjct: 75 ESTYRANEADFQSILFRQRVL--VDMENRSLESKMIGQTVKMPLALAPVGLTGMQHADGE 132 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN- 122 + A AA K V + + + + A S F+L R++ + + Sbjct: 133 ILA---ARAAAKFGVPYILSTMSICSIEDVAANSPDPFWFQLYVMRDREFMRDLIRRAKA 189 Query: 123 --------------LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 LG + G+ + + + L L P + N Sbjct: 190 AQCSALVLTADLQVLGQRHKDIKNGLSTPPKPTLM---NLLNLATKPEWGLGMLNTQRRG 246 Query: 169 AD---------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 +A + L++K + + D E Sbjct: 247 FGNIEGHVKGVSDMSSLSAWTAEQFDPGLSWDDVARIKDEWGGKLIIKGI---MDPEDAE 303 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +KSG ++ GG S I N+ + Sbjct: 304 AAVKSGADAIVVSNHGGRQLDGAPSSIRALPRI-----------------VSAVGNDIEV 346 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G DIL++ LGA + ++ V A+E L E ++M G Sbjct: 347 WMDGGIRSGQDILRAWALGARGVLIGRTYIYGLGAYGEAGVTRALEILYNEMDITMAFTG 406 Query: 321 TKRVQ 325 + +Q Sbjct: 407 HRNIQ 411 >gi|206579076|ref|YP_002238014.1| putative L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] gi|206568134|gb|ACI09910.1| putative L-lactate dehydrogenase (cytochrome) [Klebsiella pneumoniae 342] Length = 394 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 109/369 (29%), Gaps = 75/369 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++ N L R L E + L + P+ + + G Sbjct: 29 AVAENTMNANATELASVALRQRVL--CGAGEPTLATTILDASWAMPVALGPV-GATGMYA 85 Query: 73 ERINRNLAIAAEKTKVAM-------------------AVGSQRVMFSDHNAIKSFELRQY 113 R A AA + A+ SQ + D +++ R + Sbjct: 86 RRGEVQAARAASHAGIPYTLSTVSVCSIEEVASQASGALWSQLYVLKDRGYMRNALERAW 145 Query: 114 A----------------------------PHTVLISNLGA-VQLNYDFGVQKAHQAVHVL 144 A PH L L A + V A + + Sbjct: 146 AAGMKTLVFTVDMPIPGSRYRDNRSGMSGPHATLRQYLQACTHPRWAMSVGLAGRPLSFG 205 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + H + + + N ++ + + + L++K + L + D Sbjct: 206 NIEAYTGHKMTMDDYMGFISNNFDPSIAWHDLEWIRDSWQGKLIIKGI---LDTDDARNA 262 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFI 262 ++ G ++ GG IPT +L + ++ + Sbjct: 263 VRLGADGIVVSNHGGRQLDGA------------------IPTARALPRVVDAVGDDLTVL 304 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+R+GVD+++ + LGA L ++ A V + ++ V+M L G Sbjct: 305 ADSGVRSGVDVIRLLALGAKGVLLGRAYIYALAAAGEAGVAHLLRLFAEDMKVTMTLTGA 364 Query: 322 KRVQELYLN 330 + L+ Sbjct: 365 TSPSAISLD 373 >gi|152970692|ref|YP_001335801.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955541|gb|ABR77571.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 394 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L + D ++ G ++ GG Sbjct: 234 WHDLEWIRDSWQGKLIIKGI---LDADDARNAVRLGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L + ++ +A G+R+GVD+++ + LGA L + Sbjct: 284 -----------IPTARALPRVVDAVGDDLTVLADSGVRSGVDVIRLLALGAKGVLLGRAY 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A V + ++ V+M L G + L+ Sbjct: 333 IYALAAAGEAGVAHLLRLFAEDMKVTMTLTGATSPSAISLD 373 >gi|149010665|ref|ZP_01832036.1| lactate oxidase [Streptococcus pneumoniae SP19-BS75] gi|147765146|gb|EDK72075.1| lactate oxidase [Streptococcus pneumoniae SP19-BS75] Length = 293 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 26/161 (16%) Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 ++ +P+ +K C D+E L +G + GG + D ++ Sbjct: 139 IAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDGGPAAFDSLQEVAE- 194 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMD 296 + G+R G + K++ GA L + P + A+ Sbjct: 195 ----------------AVDRRVPIVFDSGVRRGQHVFKALASGADLVAIGRPVIYGLALG 238 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 S V E L E M L G + +++ L N Sbjct: 239 GSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPY 279 >gi|15131504|emb|CAC48372.1| putative phenylglycolate oxidase [Amycolatopsis balhimycina] Length = 358 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 100/348 (28%), Gaps = 68/348 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--------- 65 + + N+ D ++ R L E LG++ + P+ ++ + Sbjct: 31 AEASLTANRTALDRVFVVPRML--CDLTGSTTEAELLGRRAALPMAVAPVAYQRLFHPEG 88 Query: 66 -----------GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G + + L A Q D +S EL + A Sbjct: 89 ELAAARAARDAGVPYTICTLSSVPLEEVAAVGGRPWF---QLYWLRDEK--RSLELVRRA 143 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---- 170 + + V + + + + L + + Sbjct: 144 EDAGCEAIVFTVDVPW-----MGRRWRDMRNGFALPESVTAANFDAGSAAHRRTRGASAV 198 Query: 171 -----------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 +A + + D+P++LK + L++ D +++G ++ GG Sbjct: 199 ADHTAREFAPATWESVATVRAHTDLPVVLKGI---LAAEDARRAVEAGADGIVVSNHGGR 255 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 ++ +I + + GG+R G DILK+ L Sbjct: 256 QLDGAVPGIEVLGEIAA-----------------EVSGRCEVLLDGGIRTGGDILKAAAL 298 Query: 280 GASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 GAS + P A + V E L E ++ L G V Sbjct: 299 GASGVLVGRPVMWGLAAAGQEGVRQVFELLAAELRNALGLAGCDSVSA 346 >gi|259157393|gb|ACV96854.1| lactate oxidase [Streptococcus iniae] Length = 248 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 26/166 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + ++ +P+ +K C D L++G + GG + D Sbjct: 103 KDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDGGPAAFDSLQ 159 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ + G+R G + K++ GA L L P + Sbjct: 160 EVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADLVALGRPVIY 202 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 AM S E + E + M L GT+ + + L N Sbjct: 203 GLAMGGSVGTRQVFEKINDELKMVMQLAGTQTIDDVKHFKLRHNPY 248 >gi|119514281|gb|ABL75928.1| LctO [Streptococcus iniae] Length = 289 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 26/166 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + ++ +P+ +K C D L++G + GG + D Sbjct: 121 KDVEYIAQYSGLPVYVKGPQCA---EDAFRALEAGASGIWVTNHGGRQLDGGPAAFDSLQ 177 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ + G+R G + K++ GA L L P + Sbjct: 178 EVAE-----------------AVDRRVPIVFDSGVRRGQHVFKALASGADLVALGRPVIY 220 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE-----LYLNTA 332 AM S E + E + M L GT+ + + L N Sbjct: 221 GLAMGGSVGTRQVFEKINDELKMVMQLAGTQTIDDVKHFKLRHNPY 266 >gi|145247258|ref|XP_001395878.1| hypothetical protein ANI_1_998104 [Aspergillus niger CBS 513.88] gi|134080611|emb|CAK41277.1| unnamed protein product [Aspergillus niger] Length = 403 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 21/159 (13%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +IA L D PL+LK + D +L L++G ++ GG Sbjct: 246 PHAWEQIAFLRKNWDGPLVLKGIQH---VDDAKLALEAGCDGIVVSNHGGRQVDGAIGSL 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ +I + + G+R G DI+K++ LGA + Sbjct: 303 EVLPEI-----------------VDAVGGKMTVLFDSGVRTGADIIKALCLGADAVLVGR 345 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 P + A+D + A ++ L + +M L G + V E Sbjct: 346 PVIYGLAIDGKNGAEAVMKGLLADLWQTMSLSGIRTVAE 384 >gi|145355646|ref|XP_001422069.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582308|gb|ABP00363.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 398 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 117/384 (30%), Gaps = 83/384 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------ 66 + + R FD+ H + D+V FLG + + S G Sbjct: 36 ADDEKALRRASAAFDELEF-HPSTCR-GVDDVSLETSFLGHTNTECIFPSPTAGHALWAP 93 Query: 67 -----GNNKMIERINRNLA----------------------------------------- 80 + NR A Sbjct: 94 RRGELATAEACSTSNRVFALSTLGTRSPRDIAEGVATLKADRKMFQVYVWKDRELMRDVL 153 Query: 81 IAAEKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV-QK 136 +A++ VA+ + + SF + ++ L A + ++ + Q+ Sbjct: 154 ASAKEAGFSSVALTTDLTWFGNRERDVRNSFSVPPKHSLRTTLAALAAPRWTLEYLISQR 213 Query: 137 AHQA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 A + L DGL P+ E + F + D P+ +K + L Sbjct: 214 IEYALIRDLKRDGLLRDALPIAEFATKQFDAAFDW--KDAEWFRAQWDGPMAMKGI---L 268 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D G + G R LES + I S+ A Sbjct: 269 RPDDAVRARDIGYDAVWVTSHG---------ARQLESAVAP------IDVLSSIREA--V 311 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVVAAIESLRKEFIV 314 EA+ I GG+ GVD++K++ LGA+ G+ +L V A E L E Sbjct: 312 GEEAEVIYDGGIMRGVDVVKALALGANAVGVGKAYLYGLAAGEGAGVNKAFEILTSETKR 371 Query: 315 SMFLLGTKRVQELY-LNTALIRHQ 337 +M LLG K V EL L+R + Sbjct: 372 AMGLLGVKDVHELRARGPDLVRRR 395 >gi|238895195|ref|YP_002919930.1| L-lactate dehydrogenase [Klebsiella pneumoniae NTUH-K2044] gi|238547512|dbj|BAH63863.1| L-lactate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 394 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L + D ++ G ++ GG Sbjct: 234 WHDLEWIRDSWQGKLIIKGI---LDADDARNAVRLGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L + ++ +A G+R+GVD+++ + LGA L + Sbjct: 284 -----------IPTARALPRVVDAVGDDLTVLADSGVRSGVDVIRLLALGAKGVLLGRAY 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A V + ++ V+M L G + L+ Sbjct: 333 IYALAAAGEAGVAHLLRLFAEDMKVTMTLTGATSPSAISLD 373 >gi|111023036|ref|YP_706008.1| FMN-dependent (S)-2-hydroxy-acid oxidase [Rhodococcus jostii RHA1] gi|110822566|gb|ABG97850.1| probable FMN-dependent (S)-2-hydroxy-acid oxidase [Rhodococcus jostii RHA1] Length = 393 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 238 WDDIAWLREQWGGPFMLKGV---MRVDDAKRAVDAGVTAISVSNHGGNNLDGTPAPIRAL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAE-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 337 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ LR ++ LG + +L + +I Sbjct: 338 WGLSANGQAGVENVLDVLRGGIDSALLGLGHSSIHDLTPSDVVI 381 >gi|330012598|ref|ZP_08307433.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] gi|328533757|gb|EGF60446.1| L-lactate dehydrogenase [Klebsiella sp. MS 92-3] Length = 394 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L + D ++ G ++ GG Sbjct: 234 WHDLEWIRDSWQGKLIIKGI---LDADDARNAVRLGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L + ++ +A G+R+GVD+++ + LGA L + Sbjct: 284 -----------IPTARALPRVVDAVGDDLTVLADSGVRSGVDVIRLLALGAKGVLLGRAY 332 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A V + ++ V+M L G + L+ Sbjct: 333 IYALAAAGEAGVAHLLRLFAEDMKVTMTLTGATSPSAISLD 373 >gi|239944912|ref|ZP_04696849.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|239991377|ref|ZP_04712041.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces roseosporus NRRL 11379] gi|291448375|ref|ZP_06587765.1| NocN [Streptomyces roseosporus NRRL 15998] gi|291351322|gb|EFE78226.1| NocN [Streptomyces roseosporus NRRL 15998] Length = 371 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 109/337 (32%), Gaps = 61/337 (18%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N+ F + L+ R L E DP LG + P+ ++ M +++ Sbjct: 41 ERVMAANRAAFAEVALVPRVL--TGVAEADPRTRLLGGHAAMPVAVAPMA--YQRLLHD- 95 Query: 76 NRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKS-------FELRQYAPHTVLISNL--- 123 + LA A V V + + A + LR A + L++ Sbjct: 96 DGELAAARAARAAGVPFVVSTLSSHRVEDVAATGATTWFQLYCLRDRAKNHELVARAEAA 155 Query: 124 --GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP--NGNTNFAD--------- 170 GA+ + D + + V L H+ P + F Sbjct: 156 GCGALMVTVDVPL-MGRRLRDVRNGFVLPRHVRAANLDSGPATEAHRRFGGDSALAVHTS 214 Query: 171 -------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 +A L +PL++K + L D +++G ++ GG Sbjct: 215 AAFAPGLTWRDLAELRDRTSLPLVVKGI---LDPRDARSAVEAGADAVVVSNHGGRQLDG 271 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 +P+ +L +A + + G+R G D+L+++ LGA Sbjct: 272 A------------------VPSVRALPAVAEAVGGACEVLLDSGVRGGTDVLRALALGAR 313 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFL 318 L P L A V ++ +R E M L Sbjct: 314 GVLLGRPVLWGLAAGGRRGVEQVLDLVRTELGQGMTL 350 >gi|149203913|ref|ZP_01880881.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseovarius sp. TM1035] gi|149142355|gb|EDM30400.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseovarius sp. TM1035] Length = 388 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 117/371 (31%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD +L R I + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTTDFDKIYLRQRV--AIDMTGRSTASQMIGQDVAMPVGLAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISN--- 122 I A AAEK V + + + + A + + L+ L Sbjct: 90 EI--KAARAAEKFGVPFTLSTMSICSIEDVAENTTKPFWMQVYTLKDDEFMQRLFDRARD 147 Query: 123 --------------LGAVQLNYDFGVQKAHQAVHVLGADGLF-LH--------------- 152 LG + G+ + A+ + +H Sbjct: 148 AKCSAAMITVDLQMLGQRHKDLKNGLSAPPKLTPKSVANMMTKVHWGLGMLGTKRRFFGN 207 Query: 153 -LNPLQEIIQPNGNTNFAD-------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + P+ + + +I D PL++K + + +D L Sbjct: 208 IVGHAKGVTDPSSLSTWTSEAFDQALDWDRIRQFRKMWDGPLIIKGI---MDPVDAREAL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG S I ++ + Sbjct: 265 NVGADAIIVSNHGGRQLDGALSAIRALPAI-----------------VDAVGDKIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ +A V A+E + KE +M L G + Sbjct: 308 SGIRSGQDVLKALSLGAKGTYIGRAFVYGLGAMGEAGVTRALEVIHKELDSTMGLCGRRD 367 Query: 324 VQELYLNTALI 334 V+ L + L+ Sbjct: 368 VKTLDRDILLV 378 >gi|307725578|ref|YP_003908791.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] gi|307586103|gb|ADN59500.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1003] Length = 410 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 23/173 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + + + + S L++K + +++ D G+ ++ GG Sbjct: 247 GAKDHLNW-THVRQIRSQWKGKLVVKGI---MAAEDALAARDHGVDGIIVSNHGGRQLDG 302 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + I + + GG+R G D+LK++ LGA Sbjct: 303 TAAPLRVLPRIAD-----------------AVGRDMAVMIDGGIRRGTDVLKALALGADF 345 Query: 284 GGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + PF A + V AI L E ++ LLG + EL LIR Sbjct: 346 VFVGRPFNYAASVAGKAGVAHAIGILHAEVQRNLGLLGLNSIDEL-SPDVLIR 397 >gi|302407798|ref|XP_003001734.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261359455|gb|EEY21883.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 288 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 30/213 (14%) Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I + + L D +A + H Q +G T +A LS Sbjct: 69 IPEIKFIVLTLDAPFPGKREADERFKMAEVA-HGGAPQVWGTESGLT----WGKTLAWLS 123 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + +P++LK + + L ++ I+ GG + + + Sbjct: 124 TQTKLPIVLKGIQSYEDAFAASLFPA--VKGIIISNHGGRALDTAPTPIQV--------- 172 Query: 240 DWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PA 294 L R +C + + GG++ G D++K++ LGA GL L A Sbjct: 173 ---------LLEIRKFCPQVLSKIDVLVDGGIKRGTDVVKALALGAKGVGLGRAALYGLA 223 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + V ++ L E + ++ LLG ++Q+L Sbjct: 224 LGGQEGVERTLKILADETLTALRLLGVSKIQDL 256 >gi|83769232|dbj|BAE59369.1| unnamed protein product [Aspergillus oryzae] Length = 393 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 109/366 (29%), Gaps = 89/366 (24%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-L 79 N++ F +I R L + + D + E G +S P+ + + G NK+ + Sbjct: 39 ANRQAFFRHRIIPRQLVDTNLR--DTTTEIFGHHVSAPIGFAPI--GINKIYHPSAEAAV 94 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A + + + + + ++ + L + + + ++ Sbjct: 95 AKVAGELNLPYCLSTAGSTPIE-------KVAEANGQGPRFYQLYMPH-DDELTLSLLNR 146 Query: 140 AVHVLGADGLFLHLNPLQ------------------------------------EIIQPN 163 A G D L L + Q E I P Sbjct: 147 AWKS-GFDALILTTDTWQLGWRHDDVANSNYAFYRGTGADLGLTDPVFQKRCREEGIDPE 205 Query: 164 GNTNFA-------------DLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLK 205 + A KI L P +K + S D + ++ Sbjct: 206 KDIVAASAKWIDSVWHGRAWSWEKIPWLIEQWKKISGGRPFAIKGIQ---SVADAKKCVE 262 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ G + D +I A ++ + Sbjct: 263 YGVDGIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMYDS 305 Query: 266 GLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R D+ K++ LGA + ++ + V ++SL +F + M + G V Sbjct: 306 GVRGASDVAKALALGARFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDIFMCVAGFNSV 365 Query: 325 QELYLN 330 +EL + Sbjct: 366 KELDRS 371 >gi|258655396|ref|YP_003204552.1| L-lactate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258558621|gb|ACV81563.1| L-lactate dehydrogenase (cytochrome) [Nakamurella multipartita DSM 44233] Length = 422 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 107/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + + R ++ F+D L P +V+ S LG + P I+ Sbjct: 59 AEAELSLTRARQAFEDVEFHPDILRP---APDVNTSTTILGDTSALPFGIAPTGFTRLMH 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G + K I+ L A Sbjct: 116 TEGEIAGAGGAGAAGIPFTLSTLGTSSIEDVKAANPHGRNWFQLYVMRQREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + V + + + F + +I+ L DF Sbjct: 176 ARAGFDTLMFTVDTPVAGYRMRDKRNGFSIPPQLTPGTIINALPRPWWWIDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + +++ + + + ++ LL+K V + D Sbjct: 230 TPTLEFASLSSTGGTVGDLLNSAMDPTIS--YDDLKVIREMWPGKLLVKGVQ---NVPDA 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + G+ ++ GG R IP L ++ R +A Sbjct: 285 VRLIDQGVDGIILSNHGGRQLDRAP-----------------IPFHLLPQVVREVGRDAT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG DI+ SI LGA + +L M + V I LR E +M LL Sbjct: 328 VMVDTGIMNGADIVASIALGAKFTLVGRAYLYGLMAGGREGVDKTIAILRSEIERTMALL 387 Query: 320 GTKRVQEL 327 G + EL Sbjct: 388 GVSTLDEL 395 >gi|238491824|ref|XP_002377149.1| L-lactate dehydrogenase [Aspergillus flavus NRRL3357] gi|220697562|gb|EED53903.1| L-lactate dehydrogenase [Aspergillus flavus NRRL3357] Length = 384 Score = 96.9 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 109/366 (29%), Gaps = 89/366 (24%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-L 79 N++ F +I R L + + D + E G +S P+ + + G NK+ + Sbjct: 39 ANRQAFFRHRIIPRQLVDTNLR--DTTTEIFGHHVSAPIGFAPI--GINKIYHPSAEAAV 94 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A A + + + + + ++ + L + + + ++ Sbjct: 95 AKVAGELNLPYCLSTAGSTPIE-------KVAEANGQGPRFYQLYMPH-DDELTLSLLNR 146 Query: 140 AVHVLGADGLFLHLNPLQ------------------------------------EIIQPN 163 A G D L L + Q E I P Sbjct: 147 AWKS-GFDALILTTDTWQLGWRHDDVANSNYAFYRGTGADLGLTDPVFQKRCREEGIDPE 205 Query: 164 GNTNFA-------------DLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLK 205 + A KI L P +K + S D + ++ Sbjct: 206 KDIVAASAKWIDSVWHGRAWSWEKIPWLIEQWKKISGGRPFAIKGIQ---SVADAKKCVE 262 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G+ ++ G + D +I A ++ + Sbjct: 263 YGVDGIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMYDS 305 Query: 266 GLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R D+ K++ LGA + ++ + V ++SL +F + M + G V Sbjct: 306 GVRGASDVAKALALGARFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDIFMCVAGFNSV 365 Query: 325 QELYLN 330 +EL + Sbjct: 366 KELDRS 371 >gi|328544785|ref|YP_004304894.1| L-lactate dehydrogenase (cytochrome) [polymorphum gilvum SL003B-26A1] gi|326414527|gb|ADZ71590.1| L-lactate dehydrogenase (Cytochrome) [Polymorphum gilvum SL003B-26A1] Length = 384 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 117/364 (32%), Gaps = 73/364 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ FD + RAL + D VDPS G++ + P I+ + GN Sbjct: 28 AGDEAGVRENRAAFDRLRFLPRAL--RNVDAVDPSATLFGRRWALPFGIAPIGLGNLVWP 85 Query: 73 ERINRNLAIAAEKTKVAM--------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-L 123 + + AA + A+ + R + + + + + R+ LI+ Sbjct: 86 GA-DAMVCRAARDAGLPYTLSTAGTTAIETIRGLAPETSWFQLYVAREQTIAEDLIARAE 144 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-----------------LQEIIQP---N 163 G L V + + A+GL L L P + QP N Sbjct: 145 GCEVLFVTVDVPAPARRPRDI-ANGLSLPLKPSLRMAADIACHPRWTAAMLRAGQPRFAN 203 Query: 164 GNTNFADLSSK-------------------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 ++ + L L++K + L+ D+ Sbjct: 204 IERYAPGATNAQALAAFMASQSSGRVDWAYLDWLRGRWLGRLVVKGL---LAPEDVCRAR 260 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG + + +I R + + Sbjct: 261 DAGADAVVVSNHGGRQLEASVASLTMLPEI-----------------RRAVGPDFPLLLD 303 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV-AAIESLRKEFIVSMFLLGTKR 323 G+R+G D++K+++ GA + + + +A V + E M LG R Sbjct: 304 SGVRSGADVVKALVAGADFVLIGRAAMYAVAAAGEAGVRDLVRLFEAEIRSVMAQLGVTR 363 Query: 324 VQEL 327 Q+L Sbjct: 364 TQDL 367 >gi|288960056|ref|YP_003450396.1| L-lactate dehydrogenase (cytochrome) [Azospirillum sp. B510] gi|288912364|dbj|BAI73852.1| L-lactate dehydrogenase (cytochrome) [Azospirillum sp. B510] Length = 404 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 23/156 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L+LK + L D + +G ++ GG Sbjct: 255 WDDVRRIRDRWGGKLILKGI---LDPEDAVMAADTGADALIVSNHGGRQLDGA------- 304 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I + +L + + + + GG+R+G D++K++ LGA + F Sbjct: 305 -----------ISSISALPAIVEAVGDRIEVLMDGGIRSGQDVVKALALGAKGTFIGRAF 353 Query: 291 LKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 L +A V +E +RKE V+M + G + ++ Sbjct: 354 LYGLGAGGEAGVSQCLEIIRKEMDVTMAMCGLRDIR 389 >gi|317038033|ref|XP_001401511.2| L-lactate dehydrogenase [Aspergillus niger CBS 513.88] Length = 420 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 112/358 (31%), Gaps = 81/358 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F +I L + + D + E G K+S P+ + + G NK+ + Sbjct: 71 ANRQAFFRHRIIPNQLVDTNLR--DTTTEIFGHKVSAPIGFAPI--GINKIYHPSAELAV 126 Query: 80 AIAAEKTKVAMAV---GS-----------------QRVMFSDHNAIKSFELRQYAP--HT 117 A A + + + GS Q M D S R + Sbjct: 127 AKVAGELNLPYCLSTAGSTPIEKVGEANGQGPRFFQLYMPHDDELTLSLLNRAWNSGFDA 186 Query: 118 VLI--------------SNLGAVQ---LNYDFGV------QKAHQAVHVLGADGLFLHLN 154 +++ +N + D G+ ++ +A D + Sbjct: 187 LILTTDTWQLGWRHDDVANSNYAFYRGIGADLGLTDPVFQKRCREAGIDPEKDVVAASAK 246 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIR 209 + + A KI L P ++K + S D + ++ G+ Sbjct: 247 WIDSVWHGR-----AWSWEKIPWLIEQWKKISGGRPFVIKGIQ---SVADAKKCVEYGVD 298 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + D +I A ++ + G+R Sbjct: 299 GIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMFDSGVRG 341 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G D+ K++ LGA + ++ + V ++SL +F + M + G V++ Sbjct: 342 GSDVAKALALGARFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDILMAVGGYNSVKD 399 >gi|169630913|ref|YP_001704562.1| L-lactate dehydrogenase LldD1 [Mycobacterium abscessus ATCC 19977] gi|169242880|emb|CAM63908.1| Possible L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium abscessus] Length = 392 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 118/376 (31%), Gaps = 75/376 (19%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 I+ K + N + F + + I D + S LG+ +S P++IS G Sbjct: 30 ISASEKGLTVSDNVEAFGELGFEPHVV-GIQPDR-ELSTTVLGQDISLPVMISPT--GVQ 85 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----FEL------------RQY 113 + +A AA AM + S + + F++ Q Sbjct: 86 AVDPDGEVAVARAAAARGTAMGLSSFASKPIEDVVAANPKTHFQIYWLGGRDDVAQRIQR 145 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAV-HVLGADGLFL-----------------HLN- 154 A + + + ++ G A+ + + +N Sbjct: 146 AKDAGAVGLIATLDWSFSHGRDWGSPAIPEKMDLRSMIRLAPEVVTKPSWLWSFGKGMNI 205 Query: 155 -----PLQEIIQPNGNTNF----------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 P Q G F A + + D P +LK V + D Sbjct: 206 PDLRVPNQAARGEAGPPFFDAYGQWMGTPAPTWDDVRWMREQWDGPFMLKGV---MRIDD 262 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + + G+ ++ GG + + GI A ++ Sbjct: 263 AKRAVDCGVSAISVSNHGGNNLDGTPASIRALP---------GI--------ADAVGHDI 305 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFL 318 + + GG+R G D++K++ LGA + +L A V ++ +R ++ Sbjct: 306 EVLLDGGIRRGSDVVKALALGARAVMIGRAYLWGLAASGQAGVENVLDIMRGGIDSALMG 365 Query: 319 LGTKRVQELYLNTALI 334 LG K V EL + LI Sbjct: 366 LGKKSVHELSPDDLLI 381 >gi|164654943|ref|XP_001728605.1| hypothetical protein MGL_4255 [Malassezia globosa CBS 7966] gi|159102483|gb|EDP41391.1| hypothetical protein MGL_4255 [Malassezia globosa CBS 7966] Length = 170 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L D P++LK + + D +L +K G+ ++ GG + S ++ Sbjct: 23 WDDLKYLREYWDGPIVLKGI---MDVEDAKLAVKHGMDGIVVSSHGGRQVNDSVSSIEVL 79 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I ++ + G+R+G DI K++ LGA + + P + Sbjct: 80 PEI-----------------VDAVGDKLDVLFDSGIRSGTDIAKALALGAKMVLVGRPCV 122 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 AM + + L + +SM L G +++ LN + +R Sbjct: 123 YGLAMGGQKGALHVLRCLLADLELSMRLCGVASIEKEELNPSRLR 167 >gi|15678222|ref|NP_275337.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621238|gb|AAB84700.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 499 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 75/392 (19%), Positives = 141/392 (35%), Gaps = 80/392 (20%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-------PSVEFLGK--- 53 +RK + + G R FDD +I ++S +D V + Sbjct: 101 ERKSREGSYKVRGCGAVRRIPTFDDLVIIP---AQVSRPPIDKYREPCNTRVVIGDRYAE 157 Query: 54 ---KLSFPLLISSMTGGNNKMIERIN----RNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 +L P++I++M+ G +I +LA A T + +R S I Sbjct: 158 NPLELDTPIMIAAMSFGALSKEAKIALAMGASLAGTATNTGEGGMLPEERRYASK--LIA 215 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNP-LQEIIQP 162 + ++ ++N A+++ G + H + A+ + + P + + P Sbjct: 216 QYASGRFGVSAEYLNNSEAIEIKIGQGAKSGMGGHLLAEKVTAEVSRIRMIPEGTDALSP 275 Query: 163 NGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-R 216 + + +S VP+++K G + D+++ K+G + G + Sbjct: 276 ARHMDIVGPEDLSMKISQLREITDWKVPIMVKFTS-GRVADDVKIAAKAGADAVVVDGMQ 334 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNG 270 GGT D+ GIPT ++ A +E IA+GG+R+G Sbjct: 335 GGT---------GAGPDVVTEHS--GIPTIAAIVEADEALKEVNLRDEVSLIAAGGIRSG 383 Query: 271 VDILKSIILGASLG-------------------------GLAS--PFLKPAMDSSDA--- 300 D+ K+I LGA G+A+ P L+ +D +A Sbjct: 384 ADVAKAIALGADAVYIGTAALVSIGCRVCQMCYTGTCRKGIATQDPRLRKRLDYVEAGKN 443 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 V IE++ +E + G V +L + Sbjct: 444 VARYIEAMTEEVCMLTQQAGNTDVSKLEKDDL 475 >gi|119386782|ref|YP_917837.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] gi|119377377|gb|ABL72141.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] Length = 387 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 115/371 (30%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N F L R + +G+K++ P+ ++ MTG E Sbjct: 33 EGTFRENCTDFQRIKLRQRV--AVDMTGRTTESTMIGQKVAMPVALAPVGMTGMQCADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL----------------RQ 112 A AA+ V + + + + A F+L R+ Sbjct: 91 I---KAARAAKAFGVPFTLSTMSICSIEDVAEAVQAPFWFQLYVMRDQEFLEAIIERARR 147 Query: 113 YAPHTVLIS----NLGAVQLNYDFGVQKAHQA---------------VHVLGADGLFLH- 152 ++++ LG + G+ + + +L F Sbjct: 148 ANCSALVLTLDLQILGQRHKDLKNGLSAPPRLTLPVLLDLATKWRWGIEMLRTKRRFFGN 207 Query: 153 --------LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 +P I + KIA + L+LK + D + Sbjct: 208 IVGHAKGVGDPSSLIAWTAEQFDPQLDWGKIARIRDLWGGKLILKGIN---DPEDARMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG S + +I + + + Sbjct: 265 DFGADAIIVSNHGGRQLDGAVSSIRMLPEI-----------------VKAVGDRVEIHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ +GA + F+ +A V A+E ++KE ++M L G + Sbjct: 308 SGIRSGQDVLKALAMGAHATHIGRAFIYGLGAMGEAGVTRALEVIQKELDITMALCGERD 367 Query: 324 VQELYLNTALI 334 V+ L + LI Sbjct: 368 VKALGRHNLLI 378 >gi|320586090|gb|EFW98769.1| mitochondrial fmn-dependent dehydrogenase [Grosmannia clavigera kw1407] Length = 510 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 28/169 (16%) Query: 163 NGNTNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 D+ + +P+++K + D + L G + ++ GG Sbjct: 327 EDLRWLRDVIDEATATPAADNTSHLPIIVKGIQRA---SDALIALAMGCQGIVLSNHGGR 383 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILK 275 + P L+L C E GG R G D++K Sbjct: 384 AADGAP------------------PAILTLLELHRCCPEIFGRMDIFVDGGFRRGSDVVK 425 Query: 276 SIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 +I LGAS G PF+ V A ++ E +M L G + Sbjct: 426 AICLGASAVGFGRPFVYSVGYGYAGVRHAAAIIQDEVRTAMQLCGMSDL 474 >gi|118616558|ref|YP_904890.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium ulcerans Agy99] gi|118568668|gb|ABL03419.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium ulcerans Agy99] Length = 390 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WDDIAWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVAA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVLVGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + +L + LI Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHSSIHDLRSDDILI 380 >gi|86136046|ref|ZP_01054625.1| L-lactate dehydrogenase, putative [Roseobacter sp. MED193] gi|85826920|gb|EAQ47116.1| L-lactate dehydrogenase, putative [Roseobacter sp. MED193] Length = 388 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA L ++LK + L + D ++ +K G ++ GG S + Sbjct: 235 WGKIAKLKEMWGGKVILKGI---LDAEDAKMAVKVGADAIVVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I E + I G+R+G D+LKS+ +GA + F+ Sbjct: 292 PQILD-----------------AVGGEVEVILDSGIRSGQDVLKSLAMGADGTMIGRAFV 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V A+E ++KE +M L G + V+ L + LI Sbjct: 335 YGLGAMGQKGVTTALEVIQKELDTTMALCGERSVENLGRHNLLI 378 >gi|256375216|ref|YP_003098876.1| Lactate 2-monooxygenase [Actinosynnema mirum DSM 43827] gi|255919519|gb|ACU35030.1| Lactate 2-monooxygenase [Actinosynnema mirum DSM 43827] Length = 393 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 108/354 (30%), Gaps = 82/354 (23%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA- 80 N++ FD W ++ R L + V LG ++ P+L++ + + I + LA Sbjct: 60 NREAFDGWRIVPRML--TGASQRHLGVTVLGTEMPAPVLLAPI---GVQSILHPDGELAT 114 Query: 81 -IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AA + V + + + E+ + A L + + Sbjct: 115 ARAAAELGVPFVLSTASSHTVE-------EVAEAAGDGPRWFQLYRPN-EPEVCASILDR 166 Query: 140 AVHVLGADGLFLHLN---------------------------------------PLQEII 160 A G L + L+ P +E + Sbjct: 167 A-RKAGFSTLVVTLDTWTLAWRPHDLDHAYLPFIRGIGTATPFSDPVFRAGLSAPPEEDL 225 Query: 161 QPNGNTN---FADLSSK---IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 F + + L D P++LK V L D +G+ ++ Sbjct: 226 TEAVLRWVQMFTGTDHRWEDLPFLREHWDGPIVLKGV---LHPDDALRAADAGMDGVVVS 282 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + D D+ + + G+R G D+L Sbjct: 283 NHGGRQVDGAVAALDALPDV-----------------VDAVAGRMEVLFDSGVRGGADVL 325 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA L P+ A V + SL +F +++ L G + EL Sbjct: 326 KALALGARAVLLGRPYAYGLAHGGQQGVRHVLRSLLADFDLTLGLSGHRSPAEL 379 >gi|85707112|ref|ZP_01038200.1| L-lactate dehydrogenase, putative [Roseovarius sp. 217] gi|85668398|gb|EAQ23271.1| L-lactate dehydrogenase, putative [Roseovarius sp. 217] Length = 388 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 113/371 (30%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD +L R I + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTTDFDKIYLRQRV--AIDMTGRSTASQMIGQDVAMPVGLAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI----- 120 I A AAEK V + + + + A + + L+ L Sbjct: 90 EI--KAARAAEKFGVPFTLSTMSICSIEDVAENTTKPFWMQVYTLKDDDFMQRLFDRARD 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFAD- 170 + A + D ++ A L + + +Q + F Sbjct: 148 AKCSAAMITVDLQLLGQRHKDLKNGLSAPPKLTPKSVANMMTKVQWGLGMLGTKRRFFGN 207 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 +I D PL++K + + D L Sbjct: 208 IVGHAKGVTDPSSLSTWTSEAFDQALDWDRIRQFRKMWDGPLIIKGI---MDPRDAREAL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG S I ++ + Sbjct: 265 NVGADAIIVSNHGGRQLDGALSAIRALPAIMD-----------------AVGDKIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ LGA + F+ +A V A+E + KE SM L G + Sbjct: 308 SGIRSGQDVLKALSLGAKGTYIGRAFVYGLGSMGEAGVTRALEVIHKELDSSMGLCGRRA 367 Query: 324 VQELYLNTALI 334 V++L + ++ Sbjct: 368 VKDLDRDILMV 378 >gi|183981043|ref|YP_001849334.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium marinum M] gi|183174369|gb|ACC39479.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium marinum M] Length = 390 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WDDIAWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVAA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVLVGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + +L + LI Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHSSIHDLRSDDILI 380 >gi|149201353|ref|ZP_01878328.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. TM1035] gi|149145686|gb|EDM33712.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. TM1035] Length = 370 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 108/359 (30%), Gaps = 66/359 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G N+ D L R L + + D S+ G P I+ M G N Sbjct: 32 AGEEHGEALNRAALRDLRLKPRVL--CNVAKRDLSLNVFGHAARVPFGITPM-GMCNLST 88 Query: 73 ERINRNLAIAAEKTKVAMAV----------------------------GSQRVMFSDHNA 104 + LA A + +V + V GS + + Sbjct: 89 PGADLMLARLAARDRVPLGVSTVASTPLEQMIEVAEGHAWFQLYFSGDGSGTMALVERAR 148 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDF-------GVQKAHQAVHVLGADGLFLHLNPL- 156 ++ + +L + F Q A+H + G LH P Sbjct: 149 AAGYQTLVVTLDVPEVGR-RPRELRHGFKMPFKIGPRQFVDFALHPRWSLGTLLHGKPEM 207 Query: 157 ----QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 Q + AD S + L +A L++K V L D +G+ Sbjct: 208 ANFRQGGFDRTASRAAADWSY-LDRLRAAWPGKLVIKGV---LDVEDAVRLRAAGVDAIQ 263 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + +++ E GLR+G D Sbjct: 264 VSSHGGRQLDGAPEPILMLAEMRAAL-----------------GPEFPLFFDSGLRSGED 306 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 I+K +GA+ L P L + + E + +E +++ LG K + L Sbjct: 307 IVKVHAMGANFAFLGRPLLFAMAAGGERGLHRLWEVMTEEVSLTLAQLGRKSMSGLQEC 365 >gi|326388423|ref|ZP_08210019.1| FMN-dependent dehydrogenase [Novosphingobium nitrogenifigens DSM 19370] gi|326207155|gb|EGD57976.1| FMN-dependent dehydrogenase [Novosphingobium nitrogenifigens DSM 19370] Length = 374 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 107/368 (29%), Gaps = 71/368 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + + N F W L+ R L + +D S F+G + P + + G G Sbjct: 21 AHSETTMRANAGDFAQWRLMPRIL--RNVQHIDLSTRFMGARHRLPFWFAPV-GYLGLLS 77 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDH-------NAIKSFELRQYAPHTVLISN- 122 I A + M + + + + +A + + +R A ++ Sbjct: 78 PRGDIAA--GRVACEAGTVMGISTFSIAPLEEIAGAAGQSACQLYMVRDRAITRDILDRA 135 Query: 123 ----LGAVQLNYDFGV--------QKAHQAVHVLGADG---LFLH--------LNPLQEI 159 + + L D V + +AV GA + H N E Sbjct: 136 KSAGISDLILTVDTPVTPLRPRDARNGFRAVTRFGARHVLDMVRHPRWLADMARNGPVEA 195 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKE-------------VGCGLSSMDIELGLKS 206 + + A L +D L+ + V L D Sbjct: 196 GNIARYDLGKGILEQSARLGREIDPRLVWDDLDWLRGVWSGRIYVKGVLHPGDARACRDH 255 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASG 265 G ++ GG S L + R + + + Sbjct: 256 GADGVIVSNHGGRQLDFAPSAIS------------------CLPVVREAVGPDCEVLFDS 297 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++ ++ LGA L V A++ LR++ ++ L+G + Sbjct: 298 GVRRGTDVVMALALGADAVALGRACAYGLGAFGEAGVARAVDLLREDIASTLALMGLASI 357 Query: 325 QELYLNTA 332 EL Sbjct: 358 DELKAQPR 365 >gi|317126645|ref|YP_004100757.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Intrasporangium calvum DSM 43043] gi|315590733|gb|ADU50030.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Intrasporangium calvum DSM 43043] Length = 433 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + L +P+LLK + D ++ G+ ++ GG + Sbjct: 287 WSDLGRLRDRTRLPILLKGIQAA---EDAVRAVEIGVDGIVVSNHGGRQVDGAIASLHAL 343 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + G+R+G DI K++ LGA + P++ Sbjct: 344 PPI-----------------VERAAGRVPVLFDSGIRSGSDIYKALALGADAVLVGRPWV 386 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ A +E L E ++M L G + V E+ Sbjct: 387 HGLALQGGAGARAVLEHLLAELDLTMALSGVRTVDEIRER 426 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 14/143 (9%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N+ FD+ ++ R L + D SVE G++L P+L++ + G ++ Sbjct: 58 AGQQRTDVANRAAFDEAPIVPRML--VDVSTRDLSVELFGRRLPAPVLLAPI--GALELA 113 Query: 73 E-RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 R + LA + + + + SQ + P + + D Sbjct: 114 HPRADVELAEGVRELGLPVVISSQGST----PMEDTAAALGDCPRWFQLY-----WSSND 164 Query: 132 FGVQKAHQAVHVLGADGLFLHLN 154 V+ + +G+D L + L+ Sbjct: 165 DLVESFVRRAEAIGSDALVVTLD 187 >gi|308178874|ref|YP_003918280.1| L-lactate dehydrogenase [Arthrobacter arilaitensis Re117] gi|307746337|emb|CBT77309.1| L-lactate dehydrogenase (cytochrome) [Arthrobacter arilaitensis Re117] Length = 406 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 120/373 (32%), Gaps = 76/373 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--K 70 ++ R ++ F L+ R L + D S G + P I+ TG Sbjct: 61 AGREITATRARQVFHSVELLPRILHGTAHS--DLSTTIAGAPSALPFGIAP-TGFTRFMH 117 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFEL-----RQYAPHTV- 118 I + AA+K + ++ + V + K F+L R+ + V Sbjct: 118 SEGEIGGS--RAAQKAGIPFSLSTMGTRSIEEVAAAAPEGRKWFQLYLWKDREKSKKLVE 175 Query: 119 ----------------------LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 L +++ + ++ A + FL + L Sbjct: 176 RAAAAGFDTLLVTVDTPVAGQRLRDARNGMKIPPELTLKTVLDASYRPEWWYNFLTTDSL 235 Query: 157 QEIIQPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + + + + + + L +K V L++ D + Sbjct: 236 KFASLSDTSADLPTIINSMFDSSLDFEDLRWIRELWKGKLFVKGV---LTTEDAAKAKAA 292 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASG 265 G ++ GG R +L R E + I Sbjct: 293 GADGLVVSNHGGRQLDRAPIA------------------FEALSEVRAEVGPEMEIIMDS 334 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+ +G DI+ ++ GA + +L M + V AIE L KE V+M L+G + Sbjct: 335 GIMSGADIVAALCAGADFVLIGRAYLYGLMAGGEEGVSRAIELLAKEVEVNMQLMGAASI 394 Query: 325 QELYLNTALIRHQ 337 ++L + +LIR + Sbjct: 395 KDL--DESLIRRR 405 >gi|296168804|ref|ZP_06850486.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896507|gb|EFG76154.1| lactate 2-monooxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 384 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 116/367 (31%), Gaps = 92/367 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N + F W L R I+ +E D SVE G + P+ ++ + G G Sbjct: 49 AGDEHTQRANSEAFKRWGLYPRM--GIAPEERDMSVELFGIRFPSPIFMAPI-GVIGVCA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV---- 126 + A+ +T V VG+ P L + LG Sbjct: 106 QDGHGDLACVRASVRTDVPFFVGTLTAD----------------PMEDLAAALGNTPAFF 149 Query: 127 QLNYDFGVQKAHQAVHVLGA---DGLFLHLN----------------------------- 154 QL + A VH A G+ + L+ Sbjct: 150 QLYTPPDREMAASLVHRAEACGFKGIAVTLDTWVTGWRPRDLRGGNYPQVPSGCLANYTS 209 Query: 155 ---------PLQEIIQP--NGNTNFAD--LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P ++ + F + L S D+PL++K + D+ Sbjct: 210 DPVFRAGLQPGEDATEAAVRKLPIFGGPFRWDDLEWLRSETDLPLMVKGICH---PDDVR 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ + GG + G+P +L + Sbjct: 267 HAKDLGVDGIYCSNHGGRQ------------------ANGGLPCLDALPGVLEAADGMPV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G DI+K++ +GAS G+ P+ A+ D VV + SL E + M + G Sbjct: 309 LFDSGVRGGADIIKALAMGASAVGIGRPYAYGLALGGVDGVVHVLRSLLAEADLIMAVDG 368 Query: 321 TKRVQEL 327 +++L Sbjct: 369 YPSLKDL 375 >gi|219125915|ref|XP_002183215.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] gi|217405490|gb|EEC45433.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] Length = 381 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 122/361 (33%), Gaps = 73/361 (20%) Query: 19 IDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 + N+ F W+L RA+ P + + G+ LS P+ S G + + Sbjct: 42 LRENRDAFARWYLRPRAMRP---VGRISTRMVLFGQGLSMPVFCSP--AGVHALCHPDGE 96 Query: 78 -NLAIAAEKTKVAMAVGSQRVM--FSDHNAIKSFELRQYAPHTVLISNLGA--VQLNYDF 132 A + + + SQ A R Y + + ++ A VQ Sbjct: 97 CATARVCQDLGLLFGL-SQHATKSIEQVAAAAPQSHRYYQAYILKDRSITARLVQRAIQA 155 Query: 133 GVQKAHQAVHVL-----GADG-----------------------------LFLHLNPLQ- 157 G V + AD HL Q Sbjct: 156 GYSGIFLTVDSVRFGYREADARNGFDALPSPHRLANYDEVRQQNLDQTYNAKTHLAWDQN 215 Query: 158 -EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 E++ N ++ D++ + +PL++K + +++ D L +++G ++ Sbjct: 216 SELL-FEQNVSWKDVTWLKEEVCG--GLPLIVKGI---MTAEDAVLAIEAGADAIMVSNH 269 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG D+ ++ + GG+R G D++K+ Sbjct: 270 GGRQLDTCLGSIDVLPEV-----------------VMAVGGRVPVLLDGGVRRGTDVVKA 312 Query: 277 IILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + LGA+ GL P F A ++ +E L+ E V+M L G + + ++ + + R Sbjct: 313 LALGAAAVGLGKPLFFALACGGESSLKDMLEILQTEIEVAMALCGCETISDIQSSH-ITR 371 Query: 336 H 336 H Sbjct: 372 H 372 >gi|115977090|ref|XP_001176077.1| PREDICTED: similar to ENSANGP00000018221 [Strongylocentrotus purpuratus] Length = 377 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 103/344 (29%), Gaps = 67/344 (19%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GGNNKMIERINR 77 F + + R L + + LG+ + +P+ IS G + Sbjct: 41 AFSRYRIRSRVLQ--DVSKRCLATAVLGQSIPYPICISPTACQFFAHPDGEEATAKAAEA 98 Query: 78 NLAIAAEKTK-------VAMAVGS----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 A+ +AMA + + + +R+ A+ Sbjct: 99 VGALMVLSCGARSSMEDIAMAAPGGLRWMNIYPFTDRQLTEYTIRKAEKLGF-----KAL 153 Query: 127 QLNYDFGVQKAHQAVH-VLGADGLFLHLN---PLQEIIQP------------------NG 164 + D V H A+ +LG D + H + P+ E P Sbjct: 154 VVTVDSPVPGIHGAMEELLGKDHVVNHSSYRMPVYEADIPSARAAKQESNANHFQYVDEM 213 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 N I + +P++ K + L++ +G+ ++ GG Sbjct: 214 TYNPKATWEYIRWIKKVTSLPIVCKGI---LTAESASDAASAGVDGILVSAHGGRQQESS 270 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D +++ G + GG+R G DI K++ GA Sbjct: 271 PAPIDALAEVVEAVHGRG----------------VEVYMDGGVRTGTDIFKALGRGARAV 314 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P L A + V ++ LR + + L G ++ Sbjct: 315 FLGRPILWGLACQGPEGVTRILQILRDQLDAILALAGCTSPNDI 358 >gi|312140958|ref|YP_004008294.1| fmn-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] gi|325675405|ref|ZP_08155089.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodococcus equi ATCC 33707] gi|311890297|emb|CBH49615.1| putative FMN-dependent alpha-hydroxyacid dehydrogenase [Rhodococcus equi 103S] gi|325553376|gb|EGD23054.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodococcus equi ATCC 33707] Length = 392 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L P +LK V + D + L +G ++ GG + + Sbjct: 238 WEDVAWLREQWGGPFMLKGV---MRVDDAKRALDAGCSAISVSNHGGNNLDGTPAPIRAL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAE-----------------AVGDQLEVVLDGGIRRGSDVVKALALGARAVMIGRAYL 337 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ LR ++ LG K + +L N ++ Sbjct: 338 WGLSANGQAGVENVLDILRGGIDSAVLGLGHKSIHDLSPNDLVV 381 >gi|91978379|ref|YP_571038.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisB5] gi|91684835|gb|ABE41137.1| L-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris BisB5] Length = 379 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 115/372 (30%), Gaps = 78/372 (20%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG 67 DH + + + N R L + + D S +G+K + PL+++ + G Sbjct: 27 DHGSYA--EETLRANVDDLKRIKFRQRIL--VDISKRDLSTNIIGEKAAMPLILAPV-GS 81 Query: 68 NNKMIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS- 121 + AA+ + M++ S + ++ F+L + + Sbjct: 82 TGMQHGDGEIHACRAAQAAGIPYTLSTMSICSIEDVAANVEKPFWFQLYVMRDRGFVKAL 141 Query: 122 -------------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 +G + G+ + + + ++ I+ Sbjct: 142 IERAIAAKCSALVLTVDLQVIGQRHQDIKNGMSVPPELFKLRNILDIATKPGWVKGILGA 201 Query: 163 NGNTNFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLS 196 + NF ++ I + S L++K + L Sbjct: 202 K-SRNFGNIAGHLPGSKDLGSVSSWVASQFDPALNWRDIDWIRSIWPGKLIIKGI---LD 257 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D +K G ++ GG S ++ +I Sbjct: 258 VEDAREAVKVGAEALVVSNHGGRQLDGAPSSIEVLPEI-----------------VHTVG 300 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVS 315 + + + GG+R+G D+++++ LGA + ++ V AI+ +R E + Sbjct: 301 SHIEVMFDGGIRSGQDVMRALALGARSCMIGRAYIYGLGAFGGPGVAKAIDIIRAELSTT 360 Query: 316 MFLLGTKRVQEL 327 M L G + ++ Sbjct: 361 MGLCGVNAINQI 372 >gi|323449387|gb|EGB05275.1| hypothetical protein AURANDRAFT_31177 [Aureococcus anophagefferens] Length = 332 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 103/321 (32%), Gaps = 69/321 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + R+ ++D L H L + E D +G + P ++S G +M Sbjct: 41 ADEEIALRRSVSCYEDVELRHAVLHGVGHGETDLRTNIMGVEADLPFFVTSCAG--QRMF 98 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQ--RVMFSD-----HNAIK-----SFELRQYAPHTVL 119 A AA K VAMA+ SQ F D N K + R + Sbjct: 99 HSDGEVATATAAAKHNVAMAL-SQLTTSTFEDVRGAAPNHAKILQLYVWRDRVLLKEVLD 157 Query: 120 ISN-LGAVQLNYDFGVQKA-------------------HQAVHVLGADGL---FLHLNPL 156 + +G L Q V + + F+ ++ + Sbjct: 158 RAKEVGFTGLALTADFSWVGNRERETRTGFTVPPNYSWRQTVDAMKSPAWTYDFILVDFI 217 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + ++P + L S + LK V G D + +++G ++ Sbjct: 218 AQQMKPEFD------WKDAEWLCSEWGDTGKVALKGVARG---EDAKRAVETGFDTIWVS 268 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDI 273 GG R LES + L R + + I GG+R G+D+ Sbjct: 269 NHGG---------RQLESSVAPF---------DVLPEVRAAVGPDVEVIMDGGVRRGLDV 310 Query: 274 LKSIILGASLGGLASPFLKPA 294 +K++ GA +L Sbjct: 311 IKALARGADSVACGRAYLYGL 331 >gi|325001269|ref|ZP_08122381.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pseudonocardia sp. P1] Length = 405 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P ++K + + D + +G ++ GG + + Sbjct: 252 WEDLAWLREQWDGPFMIKGI---MHPDDARRAVDAGATAISVSNHGGNNLDGTPAAIRAL 308 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 309 PAV-----------------VDAVGDQVEVLMDGGIRRGADVVKALALGARACLIGRAYL 351 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V + L K ++ LG + EL + ++ Sbjct: 352 WGMAAQGERGVTNVLSILYKGIDEALLGLGKSSIHELSRDDLIV 395 >gi|194289763|ref|YP_002005670.1| l-lactate dehydrogenase, fmn-linked [Cupriavidus taiwanensis LMG 19424] gi|193223598|emb|CAQ69605.1| L-lactate dehydrogenase, FMN-linked [Cupriavidus taiwanensis LMG 19424] Length = 388 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 107/351 (30%), Gaps = 76/351 (21%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQR 96 ++ E + LG+ ++ P+ I+ TG G I A AA V + + Sbjct: 57 VNIGERRLATRMLGQDVAMPVAIAP-TGLAGMQHADGEILA--ARAARDFGVPFTLSTVS 113 Query: 97 VMFSDHNAIKS---------FELRQYAPHTVLISNLGAV-------QLNYDFGVQKAHQA 140 + + A + + +R A L+ A L+ Q+ Sbjct: 114 ICSIEDVAEATGGHPFWFQLYVMRDRAFVERLMDRARAAGCPALVLTLDLPVSAQRHKDL 173 Query: 141 VHVLGADGLFLHLNPLQEIIQPN--------GNTNFADL--------------------- 171 + L A N L + +P F ++ Sbjct: 174 RNGLSAPPRLTPWNLLNMMGKPRWCLGMLGTRRRTFGNIIGHVRGVDDMSSLADWSSRQY 233 Query: 172 -----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +A + L+LK + D L +SG ++ GG + Sbjct: 234 DPTLDWDDVAWIRRRWPGKLVLKGIQ---DVEDARLACQSGADALIVSNHGGRQLDGAPA 290 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 I A+ + GG+R+G D+LK++ LGA + Sbjct: 291 SIRALPAI-----------------AQAVGERIEVHMDGGIRSGQDVLKAVALGARGVYI 333 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P L V A+E +RKE ++M G ++ + + L H Sbjct: 334 GRPMLYGLGAMGQAGVTRALEIIRKELDLTMAFCGHTDIRAVGTDILLPPH 384 >gi|28557571|gb|AAO45191.1| RH48327p [Drosophila melanogaster] Length = 241 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 23/167 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L +P+++K V L++ D L + G ++ G + + + Sbjct: 91 WKDIAWLKGITHLPIVVKGV---LTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEAL 147 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 +I + + + GG+ G DI K++ LGA + P Sbjct: 148 PEI-----------------VKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAV 190 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A + V + LRK+F +M L+G + + ++ +A++ H+ Sbjct: 191 WGLAYNGQKGVEEMLSVLRKDFETTMALIGCQNLGDI--TSAMVVHE 235 >gi|242002214|ref|XP_002435750.1| glycolate oxidase, putative [Ixodes scapularis] gi|215499086|gb|EEC08580.1| glycolate oxidase, putative [Ixodes scapularis] Length = 270 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 73/211 (34%), Gaps = 42/211 (19%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R Y + NL A N V+ V V A H++P Q Sbjct: 78 RFYMHDGIRFGNLEASPENKSANVKA---MVSVRDA-----HIDPSQ------------- 116 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 I L S +PL+LK + ++ D E + G ++ GG + + ++ Sbjct: 117 SWDDITWLKSITSLPLVLKGIT---NAEDAEEAISRGASAILVSNHGGRLLDGLPATIEV 173 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 ++ + GG+R+G D++K++ LGA + P Sbjct: 174 LPEV-----------------VSAVRGRVEVYVDGGVRHGTDVIKALALGAKAVFVGRPT 216 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 A + V + LR+E + L+G Sbjct: 217 IWGLAYNGEAGVRQMLAILRREVDRDLALMG 247 >gi|304314019|ref|YP_003849166.1| glutamate synthase, alpha subunit related protein [Methanothermobacter marburgensis str. Marburg] gi|302587478|gb|ADL57853.1| glutamate synthase, alpha subunit related protein [Methanothermobacter marburgensis str. Marburg] Length = 481 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 115/340 (33%), Gaps = 43/340 (12%) Query: 18 GIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNN 69 R DD H + ++P + + V+ V KLS P++IS M+ G Sbjct: 104 SQKRLPLGLDDIHFVPAQVSSIPLNADEPVETGVTIGEMADKPLKLSSPIMISGMSYGAV 163 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV-----LISNLG 124 R+ +A A K + G V+ + + + QY+ ++ Sbjct: 164 SKNTRM--AIASTAAKLGIGFNSGEGGVLEYEMEKAGDYLIVQYSTGRFGVTEDILQRAA 221 Query: 125 AVQLNYDFGVQKAHQAV----HVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIAL 177 A+++ + G + + L + P + + + L K++ Sbjct: 222 AIEIRFGQGAYPGKGSYLPPEKITDDVARVRGLKEGEGSYSPAHHPDIRNQEELREKVSY 281 Query: 178 LSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L P+ K +GCG D++ L +G+ + + G GG + + RD I Sbjct: 282 LRELSGGSPVGAK-IGCGNVEDDVKALLDAGVDFIALDGFGGGTGAVNPHIRDSTGIPLI 340 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 IP + + IA GGLR G D+ K + LGA + + L Sbjct: 341 A----AIPRAAKVIVNEGLEGRVSLIAGGGLRTGADMAKCLALGADAVYIGTAALIAMNC 396 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + M G + AL++H Sbjct: 397 QQHRLCH----------TGMCPTGITT-----HDPALVKH 421 >gi|126728455|ref|ZP_01744271.1| L-lactate dehydrogenase (cytochrome) protein [Sagittula stellata E-37] gi|126711420|gb|EBA10470.1| L-lactate dehydrogenase (cytochrome) protein [Sagittula stellata E-37] Length = 377 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + +AL+ LLLK V ++ D+ G ++ GG Sbjct: 227 GRKDHLNW-DHLALMRDLWPGKLLLKGV---IAPADVAHARALGCDAVVLSNHGGRQLDH 282 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 I L AR + + GG+R G D++K++ LGA + Sbjct: 283 A------------------ISPLRLLPEARAQAGDMGLLIDGGIRRGTDVIKALALGADM 324 Query: 284 GGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + PFL A + V A + L+ E ++ LLG + + E+ Sbjct: 325 VLVGRPFLYAATLGGQPMVERAADILKAEVHRNLGLLGLRDLSEI 369 >gi|17227666|ref|NP_484214.1| glycolate oxidase [Nostoc sp. PCC 7120] gi|17135148|dbj|BAB77694.1| glycolate oxidase [Nostoc sp. PCC 7120] Length = 365 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 116/358 (32%), Gaps = 63/358 (17%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 I+ + + N+ F+ L R L + +++ + LG+ L PLLI+ M Sbjct: 30 ISGAGDEITLQENRAVFERIKLRPRML--VDVSQINLTTSVLGQPLQLPLLIAPMA---F 84 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + + LA A + S + + E+ ++ L + + Sbjct: 85 QCLAHTEGELATAMAAASAGTGM--VLSTLSTKSLEEVAEVGSKFSPSLQWFQL-YIHKD 141 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPL----------QEIIQPNGN-------------T 166 +A G L L ++ E + P G Sbjct: 142 RGLTRALVERAY-AAGYKALCLTVDAPVLGQRERDRRNEFVLPPGLHLANLTTISGLNIP 200 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSGIRYFDI 213 + S + ++ L ++ L D ++ G + + Sbjct: 201 HAPGESGLFTYFAQQLNPALTWDDLEWLQSLSPLPLVLKGILRGDDAARAVEYGAKAIVV 260 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + D +I +A+ + GG+R G DI Sbjct: 261 SNHGGRQLDGAIASLDALPEI-----------------VAAVNGKAEVLLDGGIRRGTDI 303 Query: 274 LKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +K++ +GA + P L A+ V I L+KE V+M L+G ++Q++ + Sbjct: 304 IKALAIGAQAVLIGRPVLWGLAVGGQAGVSHVISLLQKELNVAMALIGCSQLQDIDTS 361 >gi|89056089|ref|YP_511540.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] gi|88865638|gb|ABD56515.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] Length = 387 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +I S D P++LK + L D + + G ++ GG S + Sbjct: 235 WERIKEFRSWWDGPVILKGI---LDVEDAKEAINVGADAIVVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + G+R+G D+LK++ +GA+ + ++ Sbjct: 292 PQIMD-----------------AVGDKIEVHLDSGIRSGQDVLKALAMGATGTMIGRAYV 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 V A+E ++KE SM L G + V L LI Sbjct: 335 YGLGARGQQGVTDALEVIQKELSTSMGLCGERDVANLSRANLLI 378 >gi|218682819|ref|ZP_03530420.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 894] Length = 172 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + A LK + +S D + ++ G ++ GG S D Sbjct: 27 WNDVANMVQAWGGQFCLKGI---MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQL 83 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++I + + GG++ G +LK++ LGA GL +L Sbjct: 84 AEI-----------------VDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYL 126 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A V A+E++R E M L+G V +L R Sbjct: 127 FPLAAAGQPGVERALETIRTEIERDMKLMGCTSVDQLTRRNLRFR 171 >gi|222111822|ref|YP_002554086.1| l-lactate dehydrogenase (cytochrome) [Acidovorax ebreus TPSY] gi|221731266|gb|ACM34086.1| L-lactate dehydrogenase (cytochrome) [Acidovorax ebreus TPSY] Length = 390 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 107/365 (29%), Gaps = 77/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + N+ F L R ++ + + +G++ P+ I+ + TG Sbjct: 33 AWTEGTYRANEDDFHPIKLRQRV--AVNMEGRTTATTLVGQQAKMPVCIAPVGLTG-MQH 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLI 120 I+ A AAEK + + + + + + +A F+L R + Sbjct: 90 ADGEIHA--ARAAEKFGIPFTLSTMSICSIEDIAENTSAPFWFQLYMMRDRDAMARMIQR 147 Query: 121 SN-LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPN-GNTN 167 + L +Q Q + A+ L L P + Sbjct: 148 AKDAKCSALVLTLDLQVIGQRHKDIKNGLTAPPKPTLANILNLMTKPQWCLGMAGTRRRT 207 Query: 168 FADLSSKI--------------------------ALLSSAMDVPLLLKEVGCGLSSMDIE 201 F +L + A + L+LK + + D Sbjct: 208 FRNLVGHVKGVSDMSSLAAWTNEQFDPRLSWADVAWVKEQWGGKLILKGI---MVEEDAR 264 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L ++ G ++ GG S I + + Sbjct: 265 LAVQHGADAIVVSNHGGRQLDGAPSAIHALPAI-----------------VDAVGTQTEV 307 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G D+LK+ LGA + + V A++ L KE V+M G Sbjct: 308 WMDGGIRSGQDVLKAWALGARGTMIGRAMVYGLGAFGEAGVTKALQILHKELDVTMAFCG 367 Query: 321 TKRVQ 325 +Q Sbjct: 368 HTNIQ 372 >gi|91779944|ref|YP_555152.1| S-mandelate dehydrogenase (MdlB) [Burkholderia xenovorans LB400] gi|91692604|gb|ABE35802.1| S-mandelate dehydrogenase (MdlB) [Burkholderia xenovorans LB400] Length = 394 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 104/367 (28%), Gaps = 90/367 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ N+ F R L + + + GK ++ PL+I+ TG I Sbjct: 30 AEDEIGLQHNRDAFRSVKFQPRRL--VDISKRTTTASLFGKSVTAPLVIAP-TG--LNGI 84 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMF------------------------------- 99 + +LA AA K + A+ + Sbjct: 85 FWPDGDLALVRAAGKFDIPFALSTASTSSIEKVADAATGDIWFQLYVVHRKLAELLVKRA 144 Query: 100 -------------------SDHNAIKSFELR-QYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 + +A F + +Y+P T++ L+ + + Sbjct: 145 LAAGYSTLVLTTDVGVNGKRERDARNGFGMPIKYSPRTIVDGI-----LHPRWSLDLVRH 199 Query: 140 AVHVLGADGLFLHLNP--LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 V L A+ H+ LQ + + + + L LL+K + Sbjct: 200 GVPQL-ANFASDHVQDTELQAALMSR-QMDASFAWDDLKWLRDLWPRTLLIKGISRA--- 254 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D G ++ GG + + + Sbjct: 255 DDAARCFSLGADGVILSNHGGRQLDSAIAPIEALRETAAQL------------------- 295 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSM 316 + G+R G D++K++ LGA L L A V + ++ E +++ Sbjct: 296 HKPILIDSGIRRGSDVVKALALGAQAVLLGRATLYGLASRGEAGVADVLSIIQNEIDITL 355 Query: 317 FLLGTKR 323 +G Sbjct: 356 AQIGCTD 362 >gi|189198648|ref|XP_001935661.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982760|gb|EDU48248.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 450 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + D + +L D P++LK + + D + ++ G+ ++ GG + Sbjct: 294 YRDWGD-LQVLRKYWDGPIVLKGIQ---TLEDAQRAVECGMDGIVVSNHGGRQLDGAIAS 349 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D ++IG ++ + + G+R G D+LK++ LGA + Sbjct: 350 LDALAEIGAD---------DCIK-----SSGLSILFDSGIRTGSDVLKALALGAKAVLVG 395 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P+ AM + V + + + S+ LG + + E+ + Q Sbjct: 396 RPYAYGLAMGGEEGVKHVLNCMLADTDNSLANLGKRNLGEITREDLRVMQQ 446 >gi|323136746|ref|ZP_08071827.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylocystis sp. ATCC 49242] gi|322398063|gb|EFY00584.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylocystis sp. ATCC 49242] Length = 392 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 61/172 (35%), Gaps = 22/172 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + IA + L+LK + + D + G ++ GG S Sbjct: 230 DPRVTWEDIAWIRRLWQGKLVLKGI---MDIEDARRAVDVGADAIVVSNHGGRQLDGAPS 286 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 I T ++ AR + GG+R+G D+LK+I LGA + Sbjct: 287 S---------------ISTLPAI--ARAVGGSVETWLDGGVRSGQDVLKAIALGARGVMI 329 Query: 287 ASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +L + V +E + KE ++M G + + + LIR + Sbjct: 330 GRAYLYGLGALGEEGVRLCLEIIAKELSLTMGFCGVVDINAVTV-EILIRRR 380 >gi|158423279|ref|YP_001524571.1| putative L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] gi|158330168|dbj|BAF87653.1| putative L-lactate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 382 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 105/369 (28%), Gaps = 76/369 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + I N+ D L AL ++S D G PL+I+ + Sbjct: 32 DEVSIAGNRAGLDAIRLAPFALEDVSQRAQD--TVLFGTPQPCPLVIAPTAVAGLMSYDG 89 Query: 75 INRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIKSFELRQYAPHTVLISNL-GAVQL 128 +A AA+ + V +Q + D A F+L + + L A Sbjct: 90 -EVAMARAAKAHDIPFCVSTQSMTSIETIARDSGARLWFQLYVWKNRARTFALLDRAAGA 148 Query: 129 NYDFGVQKAHQAV----HVLGADGLFLHLNP-----LQEIIQPN-------------GNT 166 D V AV +G + L P + + P G Sbjct: 149 GADTLVLTVDTAVSPKREYNQRNGFGIPLKPSVRAGIDVLCHPRWFADVFLRTLRTTGMP 208 Query: 167 NFADL------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 +A +A L + L+LK + L + D Sbjct: 209 TYAHYPDEFRTALGRAVVGDEISLATDVSWKDVAALRAHWKGRLILKGI---LRASDATR 265 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G+ ++ G + + I + Sbjct: 266 AIAHGVDGIVVSNHGARNLDCAPHPAHVLPAI-----------------VAAAGGRLTVL 308 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 A G+R G DI K + LGA + L A + IE LR E +M LLG Sbjct: 309 ADSGVRRGSDIAKYLALGADGVLVGRAPLYGLAAAGTPGASRVIELLRAELDTTMALLGV 368 Query: 322 KRVQELYLN 330 R+ +L Sbjct: 369 TRLDQLPRT 377 >gi|214003853|gb|ACJ60973.1| VEG31 [uncultured soil bacterium] Length = 369 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 21/159 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + D+P++LK + L+ D + +G+ ++ GG ++ Sbjct: 211 WESVEAVRAHTDLPVVLKGI---LAVEDARRAVDAGVGGIVVSNHGGRQLDGAVPGIEML 267 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 +I + + + GG+R+G D+LK+ LGAS + P Sbjct: 268 GEIAA-----------------AVSGDCEVLLDGGIRDGGDVLKATALGASAVLVGRPVM 310 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 A D ++ L E +M L G + V Sbjct: 311 WGLAAAGQDGARQVLDLLATELRDAMGLAGCESVSAARR 349 >gi|255264117|ref|ZP_05343459.1| L-lactate dehydrogenase [Thalassiobium sp. R2A62] gi|255106452|gb|EET49126.1| L-lactate dehydrogenase [Thalassiobium sp. R2A62] Length = 378 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 109/369 (29%), Gaps = 88/369 (23%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTG----GN 68 + + RN+ D + L E D LG+ + P I+ M+G G Sbjct: 35 DERTLARNRSRLDQVRFLPSILHGEF--EPDLRTTLLGRDYTVPFGIAPVGMSGLIWPGA 92 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL------------- 110 +M LA A + + + + + F++ Sbjct: 93 EQM-------LARTAARHGMPYTLSTVASQLPEDVGGHAGDNGWFQIYPPRDRDIRLDIL 145 Query: 111 ---RQYAPHTVLISNLGAVQLNYDF----GVQKAHQAVHVLGADGLFLH--LNPLQEIIQ 161 R+ HT++++ V + G+ + + L LN +++ Sbjct: 146 RRAREAGFHTLVLTVDVPVASRRERQVRGGLTQPPRLTPRLAMQAAQCPAWLNGIRKTGM 205 Query: 162 PNGN----------------------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 P D S + L D PL++K V ++ D Sbjct: 206 PRLRLMESYADTKGSMPSNQHIGYLLRTSPDWSY-LRALRDEWDGPLIVKGV---MNPDD 261 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 E K G I+ G + + + A E Sbjct: 262 CERLAKDGADAIWISNHAGRQFDAAPATIEQLP-------------------AIRAATEL 302 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFL 318 I G+ G+D+L+++ LGA L + ++ L K+ +M Sbjct: 303 PVIMDSGVETGLDVLRALALGADFVMLGRAWHYGLGALGEAGAAHVMDILAKDMAANMGQ 362 Query: 319 LGTKRVQEL 327 +G + + +L Sbjct: 363 IGARDLSDL 371 >gi|134102956|ref|YP_001108617.1| lactate 2-monooxygenase [Saccharopolyspora erythraea NRRL 2338] gi|133915579|emb|CAM05692.1| lactate 2-monooxygenase [Saccharopolyspora erythraea NRRL 2338] Length = 432 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P++LK + D L L G+ ++ GG D Sbjct: 290 WEHLAWLRERTSLPIVLKGLQH---PDDAALALDHGVDGIIVSNHGGRQVDGAIGAIDAL 346 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A + G+R+G D K++ LGA + P++ Sbjct: 347 P---------GI--------AERVGGRIPVLFDSGIRSGADAFKALALGARAVLVGRPYV 389 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ +D + +L EF ++M L G ++ + Sbjct: 390 YGLALAGADGAREVVRNLMAEFDLTMALTGRTTTSDITRD 429 Score = 42.6 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+ D W ++ R L ++ D VE G +L P L + + G Sbjct: 63 AGRERTAHANRSALDRWEIVPRML--RDVEDRDTGVELFGARLPSPFLFAPV-GVLEMAH 119 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 + + +A AA + V M + +Q + + A+ Sbjct: 120 QEADLAVAAAARELGVPMVISTQGSVPMEETAV 152 >gi|115617205|ref|XP_001203518.1| PREDICTED: similar to ENSANGP00000018221, partial [Strongylocentrotus purpuratus] gi|115623790|ref|XP_799236.2| PREDICTED: similar to ENSANGP00000018221, partial [Strongylocentrotus purpuratus] Length = 359 Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 108/348 (31%), Gaps = 73/348 (20%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNK 70 + +D + F + + + L + + LG+ L +P+ ++ T + Sbjct: 32 RLCLQD-----SINAFSRYRIRSQVLQ--DVSKRSLATTVLGQPLKYPICVAP-TAIHTF 83 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFELRQYAPHTVLISNLG 124 + A AE + M + + V + N +L + + +S + Sbjct: 84 AHRNAEKETAKGAEAAETLMVLSADSGFPMSDVAAAAPNGHHWMQLYPFNDPLLTLSVIR 143 Query: 125 -AVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQP--------------NGN 165 A L + V L + H+ ++ P G+ Sbjct: 144 RAESLGFKGLVVTVDSPARGLDLRMTEIFQEPHIKNNPDLRMPVFEADIPSSRAATAEGD 203 Query: 166 ----TNFADLSSK-------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 F + I + S +P++ K + L+S + +G+ ++ Sbjct: 204 SKLIKYFRKMQYNPTATWDYIRWMKSQTSLPIVCKGI---LTSESAKAAADAGVDGIIVS 260 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + D +++ + + + GG+R G D+ Sbjct: 261 AHGGRQMDGAPAPIDALAEVVDAVRG----------------RDIEVYMDGGVRTGTDVF 304 Query: 275 KSIILGASLGGLASPFLKPAM----------DSSDAVVAAIESLRKEF 312 K++ +GA + P L D ++ V ++ LR + Sbjct: 305 KALGMGARAVFVGRPILWGLACEGEHGGTIPDGAEGVKNVLDILRSQL 352 >gi|322698501|gb|EFY90271.1| oxidoreductase [Metarhizium acridum CQMa 102] Length = 419 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +L D P++LK V LS D +L ++ G+ ++ GG D+ Sbjct: 265 WEDLKILRRYWDRPIVLKGV---LSVEDAKLAVEHGMDGLIVSTHGGRQLDGAVGTLDVL 321 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI ++ + G+R G D+LK++ LGA L P + Sbjct: 322 PDIAD-----------------AVGDKITVMIDSGIRTGADVLKAVALGAKGVFLGRPVV 364 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +D + A I + +F ++M G + + ++ + Sbjct: 365 YGLGIDGAAGAEAVIAGILADFDLTMGFCGARTIGDIKRS 404 >gi|15029329|gb|AAK81834.1| glycolate oxidase [Streptomyces lavendulae] Length = 372 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 23/165 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + L +P++LK V L+ D ++ G+ ++ GG Sbjct: 224 WSNVERLRECTRLPIVLKGV---LAPEDARRAVEHGVDAVGVSNHGGRQLDGA------- 273 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-P 289 + +L E+ + + GG+R+G D+LK++ LGAS + P Sbjct: 274 -----------LTAVDALPEVVEAVGGTCEILLDGGVRSGTDVLKALALGASGVLVGRAP 322 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A D V +E L E ++ L G V E A++ Sbjct: 323 VWGLAAGGEDGVRQVLELLAAEVTDALGLAGCAGVAEARELDAVV 367 >gi|302883488|ref|XP_003040644.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256721532|gb|EEU34931.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 429 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 21/164 (12%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + + L D P++LK + S D + ++ G++ ++ GG S Sbjct: 277 HSHSWEDVEFLKKHWDGPIVLKGIQ---SVHDAKKCVEVGVQGIVVSNHGGRQQDGGASS 333 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + I ++ I G+R G DI+K+I LGA + Sbjct: 334 LGMLPKI-----------------VDAVGDKIDVILDSGIRCGADIIKAIALGAKCVLIG 376 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P+ A+ + V + ++ + ++M L G + + E+ + Sbjct: 377 RPYAYGLALGGEEGVRHVLRAMCGDLTMNMHLAGLRDINEVTRD 420 >gi|323155259|gb|EFZ41442.1| L-lactate dehydrogenase domain protein [Escherichia coli EPECa14] Length = 149 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 20/145 (13%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL- 249 + L D ++ G ++ GG + + + +L Sbjct: 3 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALP 44 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 +A + +A G+RNG+D+++ I LGA L FL A V + + Sbjct: 45 AIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLI 104 Query: 309 RKEFIVSMFLLGTKRVQELYLNTAL 333 KE V+M L G K + E+ ++ + Sbjct: 105 EKEMKVAMTLTGAKSISEITQDSLV 129 >gi|319951173|ref|ZP_08025017.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Dietzia cinnamea P4] gi|319435161|gb|EFV90437.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Dietzia cinnamea P4] Length = 407 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 93/285 (32%), Gaps = 49/285 (17%) Query: 66 GGNNKMIERINRNLAIAAE----KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 GG K++ER+ R A A T + ++G + + + + AP + Sbjct: 146 GGKEKVLERLERAKAAGAAGVILTTDWSFSMGRDWGSPAIPEKLDARAMITLAPQIAVR- 204 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD----------- 170 + A + + + F L + Q F Sbjct: 205 ------------PRWAAEWARDVVVNKRFPDLTTPNLVGQGEMGPTFFGAYGEWMGTPPA 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + IA + D P++LK + D + + +G+ ++ GG + + Sbjct: 253 TWADIAWVVENYDGPVMLKGITR---VDDAKRAVDAGVTAISVSNHGGNNLDATPASIRC 309 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + I ++ + + GG+R G D+ K++ LGA + + Sbjct: 310 LAPI-----------------VDEVGDQVEVLLDGGIRRGSDVAKALALGARAVMIGRAY 352 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 L + V ++ +R S+ L + EL + +I Sbjct: 353 LWGLGANGQAGVENVLDIMRSGLDSSLIGLSKSSISELNRDDYVI 397 >gi|134058420|emb|CAK47907.1| unnamed protein product [Aspergillus niger] Length = 428 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 112/358 (31%), Gaps = 81/358 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F +I L + + D + E G K+S P+ + + G NK+ + Sbjct: 82 ANRQAFFRHRIIPNQLVDTNLR--DTTTEIFGHKVSAPIGFAPI--GINKIYHPSAELAV 137 Query: 80 AIAAEKTKVAMAV---GS-----------------QRVMFSDHNAIKSFELRQYAP--HT 117 A A + + + GS Q M D S R + Sbjct: 138 AKVAGELNLPYCLSTAGSTPIEKVGEANGQGPRFFQLYMPHDDELTLSLLNRAWNSGFDA 197 Query: 118 VLI--------------SNLGAVQ---LNYDFGV------QKAHQAVHVLGADGLFLHLN 154 +++ +N + D G+ ++ +A D + Sbjct: 198 LILTTDTWQLGWRHDDVANSNYAFYRGIGADLGLTDPVFQKRCREAGIDPEKDVVAASAK 257 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIR 209 + + A KI L P ++K + S D + ++ G+ Sbjct: 258 WIDSVWHGR-----AWSWEKIPWLIEQWKKISGGRPFVIKGIQ---SVADAKKCVEYGVD 309 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + D +I A ++ + G+R Sbjct: 310 GIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMFDSGVRG 352 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G D+ K++ LGA + ++ + V ++SL +F + M + G V++ Sbjct: 353 GSDVAKALALGARFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDILMAVGGYNSVKD 410 >gi|108797975|ref|YP_638172.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. MCS] gi|119867071|ref|YP_937023.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. KMS] gi|126433637|ref|YP_001069328.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. JLS] gi|108768394|gb|ABG07116.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. MCS] gi|119693160|gb|ABL90233.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. KMS] gi|126233437|gb|ABN96837.1| (S)-2-hydroxy-acid oxidase [Mycobacterium sp. JLS] Length = 397 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L D P +LK + + D + + +G+ ++ GG + + Sbjct: 238 WEDIAWLRERWDGPFMLKGI---VRVDDAKRAVDAGVSAISVSNHGGNNLDGTPAAIRCL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAD-----------------AVGQQVEVLLDGGIRRGSDVVKALALGARAVMIGRAYL 337 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + +L + LI Sbjct: 338 WGLAANGQAGVENVLDILRGGIDSALMGLGRASIHDLGPDDILI 381 >gi|149914456|ref|ZP_01902987.1| L-lactate dehydrogenase, putative [Roseobacter sp. AzwK-3b] gi|149811975|gb|EDM71808.1| L-lactate dehydrogenase, putative [Roseobacter sp. AzwK-3b] Length = 379 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 115/374 (30%), Gaps = 82/374 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALP-EISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKM 71 + RN+ D+ L+ L E+ + D SVE +G+ L P I+ M+G Sbjct: 35 AEATKARNRTKLDEVILMPSILHGEV---KPDLSVELMGRTLPLPFGIAPVGMSGMIWPG 91 Query: 72 IERINRNLAIAAEKTKVAMAVGSQR----VMFSDHNAIKSF---------ELRQYAPHTV 118 E + LA AA + + + + S ++ ++R Sbjct: 92 AEPM---LARAAARAGIPYCLSTVATQTPADLSRDLGEDAWFQMYPPRDPDIRTDMLQKA 148 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLG---------------------ADGLFLHLNPLQ 157 + G + L D V + G A G+ P Sbjct: 149 RDAGFGTLILTVDVPVPSRRERQVRSGLTTPPKLTPRLMAQVARCPAWALGIAQRGMPRM 208 Query: 158 EII-----QPNGNT--NFADLSSKIA-------LLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++I Q G A + A L A P+++K V L + D Sbjct: 209 KLIDEYAGQTKGLPSNKHAGYLLRTAPDWDYLRWLRDAWSGPMIVKGV---LDADDAGAL 265 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G+ I+ G + + + A I Sbjct: 266 EAAGVDAVWISNHAGRQFDGAPATIERLP-------------------AIRAATGLPVII 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 GG G+DIL++I LGA + +D +E L+ + +M LG Sbjct: 307 DGGFEGGLDILRAIALGADHVMFGRAWHYALGALGADGPAHLVEILKLDLEANMGQLGLT 366 Query: 323 RVQELYLNTALIRH 336 + E+ +I H Sbjct: 367 TLTEVRN--RVISH 378 >gi|291005287|ref|ZP_06563260.1| lactate 2-monooxygenase [Saccharopolyspora erythraea NRRL 2338] Length = 423 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P++LK + D L L G+ ++ GG D Sbjct: 281 WEHLAWLRERTSLPIVLKGLQH---PDDAALALDHGVDGIIVSNHGGRQVDGAIGAIDAL 337 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A + G+R+G D K++ LGA + P++ Sbjct: 338 P---------GI--------AERVGGRIPVLFDSGIRSGADAFKALALGARAVLVGRPYV 380 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ +D + +L EF ++M L G ++ + Sbjct: 381 YGLALAGADGAREVVRNLMAEFDLTMALTGRTTTSDITRD 420 Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ N+ D W ++ R L ++ D VE G +L P L + + G Sbjct: 54 AGRERTAHANRSALDRWEIVPRML--RDVEDRDTGVELFGARLPSPFLFAPV-GVLEMAH 110 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 + + +A AA + V M + +Q + + A+ Sbjct: 111 QEADLAVAAAARELGVPMVISTQGSVPMEETAV 143 >gi|167923376|ref|ZP_02510467.1| dehydrogenase, FMN-dependent family protein [Burkholderia pseudomallei BCC215] Length = 407 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 72/377 (19%), Positives = 130/377 (34%), Gaps = 76/377 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L ++S + VE G++ + P I+ M G N Sbjct: 55 AEDNRTRDDNRAAFDEYGFVTRVLRDVSQRQ--QGVELFGRRYASPFGIAPM-GINALST 111 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFSD--HNAIKSF-----------------ELRQ 112 R + L+ AA+ +A + GS + D A ++ + + Sbjct: 112 YRGDIVLSRAAQHAGIASIMSGSSLIPLEDVAAAAPDTWFQAYLPGDAGRIRALVERVAR 171 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++++ V N + V+ + + A L H Sbjct: 172 AGYRTLVVTVDIPVSANRENNVRSGFSTPLRPSPRLFWDGLTRPRWLLGTFARTLLAHGM 231 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ + + + L++K V LS D Sbjct: 232 PHFENSFATRGAPILSANVLRDFSARDHLSWAHVRQIREQWAGELVIKGV---LSVEDAR 288 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++G ++ GG S + D+ + N Sbjct: 289 IAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGNGYPV 331 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ +LG Sbjct: 332 MIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIRLLREEVDRNLAMLG 391 Query: 321 TKRVQELYLNTALIRHQ 337 L LIR + Sbjct: 392 ANGCDAL-TPDMLIRKR 407 >gi|330823642|ref|YP_004386945.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] gi|329309014|gb|AEB83429.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] Length = 383 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 25/177 (14%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 LN + + + I L LLLK + L D + G Sbjct: 221 LNAFKAWVDAQFDPGVTW--KDIEWLRGQWKGRLLLKGI---LDVEDARAAVAVGAEGIV 275 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGV 271 ++ GG + T L +A+ +A+ + G+R GV Sbjct: 276 VSNHGGRQLDSVA------------------STAAKLPAIAQAVGAQAEVLVDSGVRGGV 317 Query: 272 DILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D+ K++ LGA + P A V + ++E +++M L G R ++ Sbjct: 318 DVFKALALGARGVLVGRPWVWALAAQGEAGVRTLLAQWQRELLLAMTLAGVTRTADI 374 >gi|126735358|ref|ZP_01751104.1| L-lactate dehydrogenase, putative [Roseobacter sp. CCS2] gi|126715913|gb|EBA12778.1| L-lactate dehydrogenase, putative [Roseobacter sp. CCS2] Length = 377 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 108/368 (29%), Gaps = 88/368 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTG----GNN 69 + RN+ D L L + D S LG+ P+ I+ M+G G Sbjct: 36 EATQRRNRDQLDQVLLNPSILHGEF--DPDLSTTLLGQTHPLPIGIAPVGMSGLIWPGAE 93 Query: 70 KMIERINRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIK--SFELRQYAPHTVLISNLG 124 +M LA A + + V SQ +A F+L + L Sbjct: 94 QM-------LARTAARENIPFTLSTVASQLPEDVGPHAGAHAWFQLYPPRDPGIRDDILK 146 Query: 125 AVQ--------LNYDFGVQ------------KAHQAVHVLGADGLFLH--LNPLQEIIQP 162 + L D V + + L LN +++ P Sbjct: 147 RAKDSGFHTLVLTVDVPVASRRERQTRGGLTQPPRLTPRLAMQAAQCPAWLNGIRKTGMP 206 Query: 163 NGN----------------------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 D L D PL++K +G ++ D Sbjct: 207 RLRLMESYSDVKGTLPSNEHVGYLLRTSPDWDY-FKSLRDVWDGPLIVKGIG---NADDA 262 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 G ++ G + + T +L + R Sbjct: 263 ARLTDEGADAIWVSNHAGRQFDGGPA------------------TIETLPLVRAA-THLP 303 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 I G+ G+D+L++I LGA L F A ++ LRK+ I +M + Sbjct: 304 VIFDSGVEGGLDVLRAIALGADFVMLGRAFHYGLAALGEPGAAHVLDILRKDMISNMGQI 363 Query: 320 GTKRVQEL 327 G +++ +L Sbjct: 364 GARKLADL 371 >gi|33151350|ref|NP_872703.1| L-lactate dehydrogenase [Haemophilus ducreyi 35000HP] gi|81423980|sp|Q7VPI9|LLDD_HAEDU RecName: Full=L-lactate dehydrogenase [cytochrome] gi|33147570|gb|AAP95092.1| L-lactate dehydrogenase [Haemophilus ducreyi 35000HP] Length = 381 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 23/164 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + D P+++K + L D + ++ G ++ GG Sbjct: 234 WKDLEWIRDFWDGPMVIKGI---LDVEDAKDAVRFGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + +L +A E + +A G+RNG+D+++ I LGA + F Sbjct: 284 -----------LSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMIALGADATLIGRAF 332 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V ++ RKE V+M L R+ ++ + + Sbjct: 333 VYALSAAGRAGVENMLDIFRKEMHVAMTLTSNARISDINRDALV 376 >gi|254489045|ref|ZP_05102250.1| L-lactate dehydrogenase [Roseobacter sp. GAI101] gi|214045914|gb|EEB86552.1| L-lactate dehydrogenase [Roseobacter sp. GAI101] Length = 388 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 120/371 (32%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD L R + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTSDFDKIRLRQRV--AVDMSGRTTKTQMIGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISN--- 122 I A AAE V + + + + A + + +R + LI Sbjct: 90 EI--KAARAAEAFGVPYTLSTMSINSIEDVAEATTKPFWFQLYTMRDEDYVSRLIQRAKD 147 Query: 123 --------------LGAVQLNYDFGVQKAHQA---------------VHVLGAD-----G 148 LG + G+ + + +L A Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTAKTIANLATKWSWGIEMLSAKRRTFGN 207 Query: 149 LFLHL----NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H+ + + + KIA L ++LK + L + D ++ L Sbjct: 208 IVGHVTGVDDTANLGAWTAEQFDPSLDWGKIAKLKEQWGGKVILKGI---LDAEDAKMAL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + G ++ GG S I S+ A ++ + Sbjct: 265 QVGADAIIVSNHGGRQLDGAISS---------------ISALPSILDA--VGDQIEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ +GAS + ++ V A+E + KE ++M L G Sbjct: 308 SGIRSGQDVLKAMAMGASGTFIGRAYIYGLGAMGQKGVTTALEVIHKELDLTMALCGETS 367 Query: 324 VQELYLNTALI 334 V++L + LI Sbjct: 368 VKDLGKHNLLI 378 >gi|126739653|ref|ZP_01755345.1| L-lactate dehydrogenase, putative [Roseobacter sp. SK209-2-6] gi|126719299|gb|EBA16009.1| L-lactate dehydrogenase, putative [Roseobacter sp. SK209-2-6] Length = 388 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 119/371 (32%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F+ L R + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTSDFEKIRLRQRV--AVDMSGRSTQSQMIGQDVAMPVALAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FE---------LRQYAPHT-- 117 I A AAE+ V + + + + A + F+ +R+ Sbjct: 90 EI--KAAKAAEEFGVPFTLSTMSINSIEEVAEATSKPFWFQLYTMKDEDYIRRLMQRAKD 147 Query: 118 ---------VLISNLGAVQLNYDFGVQKAHQA---------------VHVLGAD-----G 148 + + LG + G+ + + +LGA Sbjct: 148 AKCSALVITLDLQILGQRHKDLKNGLSAPPKLTPSTVANLMTKWTWGLQMLGAKRRNFGN 207 Query: 149 LFLHLNPLQEIIQPNGNT----NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + H++ + + Q T + + K+ L ++LK + L + D ++ Sbjct: 208 IVGHVHGVSDTSQLGAWTAEQFDPSLDWGKVEKLMEMWGGKVILKGI---LDAEDAKMAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K G ++ GG S + I ++ + Sbjct: 265 KLGADAIVVSNHGGRQLDGALSSIRMLPQILD-----------------AVGDDVEVHLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK++ +GA + F+ V A+ + KE +M L G + Sbjct: 308 SGIRSGQDVLKALAMGAKGTMIGRAFVYGLGAMGQQGVTEALNVIHKELDTTMALCGERE 367 Query: 324 VQELYLNTALI 334 + L + LI Sbjct: 368 LGNLGRHNLLI 378 >gi|157372090|ref|YP_001480079.1| L-lactate dehydrogenase [Serratia proteamaculans 568] gi|166990711|sp|A8GIL1|LLDD_SERP5 RecName: Full=L-lactate dehydrogenase [cytochrome] gi|157323854|gb|ABV42951.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Serratia proteamaculans 568] Length = 380 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 118/377 (31%), Gaps = 85/377 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + + RN + L R L + ++ G+KL+ P+++ + TG + Sbjct: 29 AYAEHTLRRNTEDLAGIALRQRIL--RNMSDLSLETSLFGEKLAMPVILGPVGLTGMYAR 86 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGA 125 E A AA + + + + V + A F+L + A Sbjct: 87 RGEV---QAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMR---NA 140 Query: 126 VQLNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN---------- 163 ++ GV+ V + A N LQ + P Sbjct: 141 LERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAVRRMLQAVTHPQWAWDVGLCGK 200 Query: 164 ---------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSM 198 ++ + + P+++K + L Sbjct: 201 PHDLGNVSAYRGKPTSLEDYIGWLGTNFDPSISWKDLDWIREFWQGPMIIKGI---LDPE 257 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCN 257 D + ++ G ++ GG + + T +L +A Sbjct: 258 DAKDAVRFGADGIVVSNHGGRQLDGV------------------LSTAHALPAIAEAVKG 299 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + +A G+R+G+D+++ I LGA L A V +E + KE V+M Sbjct: 300 DITLLADSGIRSGLDVVRMIALGADGVLLGRAFAYALAAAGQAGVANLLELIDKEMRVAM 359 Query: 317 FLLGTKRVQELYLNTAL 333 L+G K + ++ ++ + Sbjct: 360 TLIGAKTIADISADSLV 376 >gi|121595600|ref|YP_987496.1| (S)-2-hydroxy-acid oxidase [Acidovorax sp. JS42] gi|120607680|gb|ABM43420.1| (S)-2-hydroxy-acid oxidase [Acidovorax sp. JS42] Length = 390 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 107/365 (29%), Gaps = 77/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + N+ F L R ++ + + +G++ P+ I+ + TG Sbjct: 33 AWTEGTYRANEDDFHPIKLRQRV--AVNMEGRTTATTLVGQQAKMPVCIAPVGLTG-MQH 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLI 120 I+ A AAEK + + + + + + +A F+L R + Sbjct: 90 ADGEIHA--ARAAEKFGIPFTLSTMSICSIEDIAENTSAPFWFQLYMMRDRDAMARMIQR 147 Query: 121 SN-LGAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPN-GNTN 167 + L +Q Q + A+ + L P + Sbjct: 148 AKDAKCSALVLTLDLQVIGQRHKDIKNGLTAPPKPTLANIINLMTKPQWCLGMAGTRRRT 207 Query: 168 FADLSSKI--------------------------ALLSSAMDVPLLLKEVGCGLSSMDIE 201 F +L + A + L+LK + + D Sbjct: 208 FRNLVGHVKGVSDMSSLAAWTNEQFDPRLSWADVAWVKEQWGGKLILKGI---MVEEDAR 264 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L ++ G ++ GG S I + + Sbjct: 265 LAVQHGADAIVVSNHGGRQLDGAPSAIHALPAI-----------------VDAVGTQTEV 307 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G D+LK+ LGA + + V A++ L KE V+M G Sbjct: 308 WMDGGIRSGQDVLKAWALGARGTMIGRAMVYGLGAFGEAGVTKALQILHKELDVTMAFCG 367 Query: 321 TKRVQ 325 +Q Sbjct: 368 HTNIQ 372 >gi|114767368|ref|ZP_01446173.1| L-lactate dehydrogenase, putative [Pelagibaca bermudensis HTCC2601] gi|114540539|gb|EAU43615.1| L-lactate dehydrogenase, putative [Roseovarius sp. HTCC2601] Length = 388 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 116/373 (31%), Gaps = 79/373 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 + N FDD +L R I + + +G+ ++ P+ ++ + TG Sbjct: 32 SEQTFRENSSDFDDIYLRQRV--AIDMTGRSTATKLIGQDVAMPVALAPVGLTG-MQHAD 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI---- 120 I+ A AAEK V + + + + A + + L+ L Sbjct: 89 GEIHA--ARAAEKFGVPYCLSTMSICSIEDVAENTSAPFWMQVYTLKDDDFMQRLFDRAK 146 Query: 121 -SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNF 168 +N A + D ++ A L + + +Q E++Q F Sbjct: 147 AANCSAAVITVDLQLLGQRHKDIKNGLSAPPKLTPKSVANMMTKVQWGLEMLQTK-RRFF 205 Query: 169 ADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ +I D PL++K + + D Sbjct: 206 GNIVGHAKGVDDPSSLSTWTAESFDQALNWDRIREFRKMWDGPLIIKGI---IDPRDALE 262 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG S + I ++ + Sbjct: 263 ACNVGADAIVVSNHGGRQLDGALSSIRALAPIMD-----------------AVGDKIEVH 305 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R+G D+LK++ +GA + ++ V A+ + KE SM L G Sbjct: 306 LDSGIRSGQDVLKAVAMGAKGCWIGRAYVYGLGAMGEKGVSEALRVIHKELDSSMGLCGR 365 Query: 322 KRVQELYLNTALI 334 + E+ + +I Sbjct: 366 TDIGEVDRDILMI 378 >gi|256378617|ref|YP_003102277.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Actinosynnema mirum DSM 43827] gi|255922920|gb|ACU38431.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Actinosynnema mirum DSM 43827] Length = 376 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 111/345 (32%), Gaps = 60/345 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ DD L+ R L + D S +G + P+ ++ M G ++ Sbjct: 42 DEVTLAANRAALDDVALLPRVLAGVQAA--DTSTSLVGTAATLPVAVAPM--GYQCLVHP 97 Query: 75 INR-NLAIAAEKTKVAMAVGSQRV----MFSDHNAIKSFELRQYAPHTVLI--------S 121 A AA V VG+ ++ A F+L ++ + Sbjct: 98 DGEVAAAAAAGAAGVPFTVGTLSSRSVEEIAETGASLWFQLYWLRDRGLVAELVARAEAA 157 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA------------ 169 A+ + D V + V L + + P+ Sbjct: 158 GCRALVITVDVPV-MGRRLRDVRNGFTLPRTVRAVHLADGPSSAHEPRQVGSGVAQHTSA 216 Query: 170 ------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L + +PL++K V L D ++ G ++ GG Sbjct: 217 VFDPAFGWRD-LEWLRARTRLPLVVKGV---LDPRDATRCVELGASAVVVSNHGGRQLDG 272 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 P+ ++L + A+ + G+R+GVD+L+++ LGA+ Sbjct: 273 AA------------------PSAVALPRVVDAVAGAAEVLFDSGVRSGVDVLRALALGAT 314 Query: 283 LGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQE 326 L P L + +E LR EF ++ L G V Sbjct: 315 GVLLGRPILWGLAVGGERGAARVLELLRTEFAQALLLAGCADVDA 359 >gi|254283216|ref|ZP_04958184.1| L-lactate dehydrogenase (cytochrome) [gamma proteobacterium NOR51-B] gi|219679419|gb|EED35768.1| L-lactate dehydrogenase (cytochrome) [gamma proteobacterium NOR51-B] Length = 347 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 103/347 (29%), Gaps = 79/347 (22%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVG-SQRV 97 S D D SVE G++ + P +S G +++ A AAE + S Sbjct: 10 SVDHPDLSVELFGRQWALPFGVSPC--GYVDLVDPGTEVETARAAEARGAPFILSMSSLA 67 Query: 98 MFSD-----HNAIKSFELRQYAPHTVL-----ISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 + N+ ++ P VL G L V K+ + L + Sbjct: 68 TLEECAAVAPNSTWMQVVQSRNPDIVLDIIRRAGESGIKVLVVTMDVPKSSKRNRDLR-N 126 Query: 148 GLFLHLNPLQEIIQPNGNTNFADL------------------------------------ 171 G L L P ++ + + + + Sbjct: 127 GFTLPLKPSLRLLW-DLMRSPSWVASTLKRPRPLPGNFMPYIPKGASVAGAAARLEHEAD 185 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 A +A ++ K + + D ++ G ++ GG + Sbjct: 186 YITTWEDFASFRAAWSGQIVAKGIQ---TPDDAARAVELGADGIIVSNHGGRQFDAAR-- 240 Query: 228 RDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 PT L + + G+R+G+D+L++I LGA + Sbjct: 241 ----------------PTISCLPAIVDRVQGAVPVMLDSGVRSGLDVLRAITLGAPMVFS 284 Query: 287 ASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 F A A + L+ E ++M GT V E+ + Sbjct: 285 GRAFYYAAGAIGRYGSAHAFDILQLELEIAMRQYGTATVSEVCQSQR 331 >gi|46116284|ref|XP_384160.1| hypothetical protein FG03984.1 [Gibberella zeae PH-1] Length = 429 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + I L D P++LK + S D + ++ G++ ++ GG Sbjct: 277 HSHSWEDIEFLKKHWDGPIVLKGIQ---SVQDAKKCVEVGVQGIVVSNHGGRQQDG---- 329 Query: 228 RDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 G+ + L + + + G+R G DI+K++ LGA + Sbjct: 330 --------------GVSSLGMLPRIVDAVGDNIDVLFDSGIRCGADIMKALALGAKCVLV 375 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P+ A+ D V + +L + ++M L G + + E+ + Sbjct: 376 GRPYTYGLALGGEDGVRHVLRALCGDLTMNMHLAGLRNISEVTRD 420 >gi|326329356|ref|ZP_08195681.1| lactate 2-monooxygenase (Lactate oxidase) [Nocardioidaceae bacterium Broad-1] gi|325952931|gb|EGD44946.1| lactate 2-monooxygenase (Lactate oxidase) [Nocardioidaceae bacterium Broad-1] Length = 422 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 21/157 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + L D+P++LK + D L+ G+ ++ GG + D Sbjct: 279 IWDDLDRLREMTDLPIVLKGLQA---PEDARRALEHGVDGIIVSNHGGRQVDGAIASIDA 335 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I + G+R+G D+LK++ LGA L P+ Sbjct: 336 LPSI-----------------VDEVDGRIPVLFDSGIRSGADVLKALALGADAVLLGRPY 378 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + A+ + V A +E + E +S+ L+G + V E Sbjct: 379 VYGLALAGAAGVQAVVEHMIAELDLSLGLVGCRSVDE 415 >gi|262203641|ref|YP_003274849.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia bronchialis DSM 43247] gi|262086988|gb|ACY22956.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gordonia bronchialis DSM 43247] Length = 407 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 101/342 (29%), Gaps = 75/342 (21%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM------- 98 S +G+++SFP++IS G + +A AA AM + S Sbjct: 78 LSTSVMGQEISFPVMISPT--GVQAVDPDGEVAVARAAAARGTAMGLSSFASHPVEEVTE 135 Query: 99 -------------FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 D ++ ++ ++++ + D+G + + V + Sbjct: 136 VNDKVFFQIYWLGSRDDILARAMRAKEAGAKGLIVTTDWVFNVGRDWGSPEIPEKVDMRA 195 Query: 146 ADGL--FLHLNPLQEIIQ-------------------PNGNTNFAD-----------LSS 173 L + + P + F Sbjct: 196 LLRLGPEIAVKPRYALSWIRDGKIIIPDLTAPNLPAKGETGPTFFGAYGEWMNTAPPTWE 255 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + L P ++K + D + + G ++ GG + + L Sbjct: 256 DLQWLREQWGGPFMVKGITR---VDDAKRAVDIGATALSVSNHGGNNLDGTPAAIRLLPA 312 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK- 292 I N+ + + GG+R G D+ K++ LGA + +L Sbjct: 313 IAD-----------------AVGNDIEVLLDGGIRRGSDVAKALALGARAVMIGRAYLWG 355 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR + LG K V EL + I Sbjct: 356 LAANGQTGVENVLDLLRMGLDGVVMGLGHKSVHELSRDDLFI 397 >gi|242809222|ref|XP_002485324.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218715949|gb|EED15371.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 305 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D PL+LK + D LK G ++ GG ++ Sbjct: 151 WEDVAFLRKNWDGPLILKGIQH---VDDARTALKYGCDGIVVSNHGGRQLDGAIGSLEVL 207 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + G+R G DI+K+I LGA + P + Sbjct: 208 PEI-----------------VDAVGKDMTVLFDSGIRTGSDIVKAIALGAKAVFVGRPVM 250 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 ++ + ++ L +F +SM + G + + + Sbjct: 251 YGYGINGKEGAKEVLQGLLADFYLSMAIAGIPSIADCHR 289 >gi|108803893|ref|YP_643830.1| lactate 2-monooxygenase [Rubrobacter xylanophilus DSM 9941] gi|108765136|gb|ABG04018.1| Lactate 2-monooxygenase [Rubrobacter xylanophilus DSM 9941] Length = 431 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P+LLK + L D + L+ G ++ GG R ++ Sbjct: 278 WEDLAFLRERTRLPVLLKGI---LHPEDARIALEHGADGVIVSNHGG---------RQVD 325 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + G + A + G+R G D+ K++ LGA+ L P++ Sbjct: 326 GEIAALDALPG--------VVEEVGGRAPVLFDSGIRGGADVFKALALGATAVCLGRPYV 377 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ V +E++ EF ++M L G + V E+ + Sbjct: 378 YGLALAGERGVAEVVENVLAEFDLTMGLAGCRSVAEISRD 417 >gi|145225635|ref|YP_001136313.1| (S)-2-hydroxy-acid oxidase [Mycobacterium gilvum PYR-GCK] gi|315445987|ref|YP_004078866.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Mycobacterium sp. Spyr1] gi|145218121|gb|ABP47525.1| (S)-2-hydroxy-acid oxidase [Mycobacterium gilvum PYR-GCK] gi|315264290|gb|ADU01032.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Mycobacterium sp. Spyr1] Length = 391 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L P LLK + + D + + +G+ ++ GG + + Sbjct: 238 WEDVAWLREQWGGPFLLKGL---VRVDDAKRAVDAGVSAITVSNHGGNNLDGTPAAIRCL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 295 PAIAD-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 337 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ L ++ LG +QEL L+ Sbjct: 338 WGLAANGQAGVENVLDILSGGIDSALRGLGKSSIQELTPEDILV 381 >gi|221640295|ref|YP_002526557.1| L-lactate dehydrogenase [Rhodobacter sphaeroides KD131] gi|221161076|gb|ACM02056.1| L-lactate dehydrogenase [Rhodobacter sphaeroides KD131] Length = 396 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA L L+LK + L D G ++ GG S + Sbjct: 244 WGKIARLRDKWGGKLILKGI---LDEEDARRAADFGADAIIVSNHGGRQLDGALSSIRML 300 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R ++ + GG+R+G D+LK++ +GA + ++ Sbjct: 301 PPI-----------------VRAVGDQVEIHMDGGIRSGQDVLKALAMGAKGTFIGRSYI 343 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A V A+E + KE +SM L G K V+ L Sbjct: 344 YGLGAMGEAGVRRALEVIWKELDISMALCGEKDVKAL 380 >gi|68536795|ref|YP_251500.1| L-lactate dehydrogenase [Corynebacterium jeikeium K411] gi|68264394|emb|CAI37882.1| L-lactate dehydrogenase [Corynebacterium jeikeium K411] Length = 425 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 110/360 (30%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ ++R ++ F D L VD + E G K S P I+ TG M Sbjct: 61 ADEEISMNRARQAFRDVEFHPSIL--NDVSNVDTTAEIFGGKSSLPFGIAP-TGFTRLMQ 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS------QRVMFSDHNAIKSFE-------------LRQY 113 A AA + + + + V ++ N F+ + + Sbjct: 118 TEGELAGASAAGSAGIPFCLSTLGTTSIEDVQKANPNGRNWFQLYVMKEREISYGLVERA 177 Query: 114 AP----------HTVLISNL-----GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 A T + N + + + A+ FL PL+ Sbjct: 178 AKAGFDTLLFTVDTPVAGNRLRDARNGFSIPPEISLGTVVNAIPRPWWWWDFLTTPPLEF 237 Query: 159 IIQPNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + +L + + L++K V + D + G+ Sbjct: 238 ASLTSTDGTVGELLDSAMDPSIKFEDLKTIREMWPGKLVVKGVQ---NLPDSKKLADLGV 294 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L ++ AR N+ G+ Sbjct: 295 DGIILSNHGGRQLDRAPVPFQLLPEV-----------------AREVGNDVDVAMDTGIM 337 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 NG DI+ +I GA + +L M +A V AIE L E +M LL + EL Sbjct: 338 NGADIVAAIAKGAKFTLIGRAYLYGLMAGGEAGVNRAIEILASEVRRTMRLLQVSSLDEL 397 >gi|255720554|ref|XP_002556557.1| KLTH0H16148p [Lachancea thermotolerans] gi|238942523|emb|CAR30695.1| KLTH0H16148p [Lachancea thermotolerans] Length = 406 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 21/170 (12%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 F+ + L D P++LK + + +D + ++ GI ++ GG + Sbjct: 255 FSHGWEDLKFLRENWDGPIVLKGIQ---TVLDAKKCVELGIEGIVVSNHGGRQQDGGPAS 311 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D +++ ++ I G+R G DI K++ LGA + + Sbjct: 312 LDRL-----------------VKIVNEVGSKIDIIFDSGIRCGSDIAKALALGAKMVLVG 354 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P++ + + V + SL + +++ L G K V +LN + + Sbjct: 355 RPYVYGLVLGGEEGVGHVLRSLLGDLTMNLHLAGIKSVSPEHLNRDCLEY 404 >gi|118469884|ref|YP_885807.1| FMN-dependent dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118171171|gb|ABK72067.1| FMN-dependent dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length = 399 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L D P +LK V + D + + +G+ ++ GG + + Sbjct: 240 WEDIAWLREQWDGPFMLKGV---IRVDDAKRAVDAGVSAISVSNHGGNNLDGTPAAIRAL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 297 PVIAE-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 339 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG + +L L+ Sbjct: 340 WGLAAEGQVGVENVLDILRGGIDSALMGLGRSSIHDLVPEDILV 383 >gi|301109868|ref|XP_002904014.1| peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4] gi|262096140|gb|EEY54192.1| peroxisomal (S)-2-hydroxy-acid oxidase, putative [Phytophthora infestans T30-4] Length = 328 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 101/315 (32%), Gaps = 63/315 (20%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N + F L R L ++D S LG +S P+ ++ + + + Sbjct: 41 ETLKENHEAFKRLVLHPRVL--RDVSKMDISTTLLGHHISSPVCVAP---SSTHRMAHPD 95 Query: 77 RNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 +A AA K + + + A S A + Q+ V Sbjct: 96 GEIASTSAAAKADTCFVLSTMPTTTLEDVATASSAANTNALRWFQLYVFKDRQITVGL-V 154 Query: 135 QKAHQAVHVLGADGLFLHLNP----------------LQEIIQP-----NGNTNFADL-- 171 ++A +A G + L ++ + + N T++AD Sbjct: 155 RRAEKA----GYKAIVLTVDAPVLGNREADVRNHFIIPKHLTMANFCPQNATTDYADYVS 210 Query: 172 --------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L S +P++ K + L+ D + +KSG ++ G Sbjct: 211 DLYDQTLSWKDVRWLKSITKLPIVAKGI---LTPEDAVMAVKSGCEGILVSNHGARQLDG 267 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + D I + + A+ GG+R G D+ K++ LGA Sbjct: 268 VAATIDALPAI-----------------VQAVGDRAEVYMDGGVRRGTDVFKALALGACA 310 Query: 284 GGLASPFLKPAMDSS 298 + P L S+ Sbjct: 311 IFVGRPVLFGLAHST 325 >gi|149916130|ref|ZP_01904652.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. AzwK-3b] gi|149809985|gb|EDM69834.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. AzwK-3b] Length = 388 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 113/371 (30%), Gaps = 77/371 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N F D +L R + D + + +G+ ++ P+ ++ + TG Sbjct: 33 EQTFRENTSDFSDIYLRQRV--AVDMDGRSTASQMIGQDVAMPVGLAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLI----- 120 I A AA K V + + + + A + + L+ L Sbjct: 90 EI--KAARAAGKFGVPYTLSTMSICSIEDVAENTDKPFWMQVYTLKDDDFMQRLFDRAKA 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADL 171 +N A + D ++ A L + + +Q + F Sbjct: 148 ANCSAAMITVDLQVLGQRHKDLKNGLSAPPKLTPASVANMMTKVQWGLGMLGTKRRFFGN 207 Query: 172 ---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 +I D PL++K + + D L Sbjct: 208 IVGHAKGVTDPSSLSTWTSEAFDPSLNWDRIREFRKMWDGPLIIKGI---MDPRDAREAL 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG S I ++ + Sbjct: 265 NVGADAIIVSNHGGRQLDGALSAIRALPAILD-----------------AVGDKIEVHID 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 G+R G D+LK++ +GA + ++ +A V A+E + KE VSM L G + Sbjct: 308 SGIRTGQDVLKALAMGAKGTYIGRAYVYGLGAMGEAGVTRALEVIHKELDVSMALCGRRD 367 Query: 324 VQELYLNTALI 334 V+ L + +I Sbjct: 368 VRTLDRDILMI 378 >gi|119387784|ref|YP_918818.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] gi|119378359|gb|ABL73122.1| L-lactate dehydrogenase (cytochrome) [Paracoccus denitrificans PD1222] Length = 385 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ + P++LK + D + L +G ++ GG S Sbjct: 235 WGRVEQIIRKWGGPVILKGIN---DPEDAQRALDTGCDAILVSNHGGRQLDGAPSTIRAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R + G+++G + LK+I GA+ + F Sbjct: 292 PAI-----------------RRAVGPDFPLYLDSGIQSGQEALKAIASGANGVFVGRAFT 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 V AA+ LR+E ++M L G +++ Sbjct: 335 YGLGAMGQRGVEAALAILRREMDITMALCGVNDIKD 370 >gi|77464405|ref|YP_353909.1| lactate dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|126463247|ref|YP_001044361.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17029] gi|4761135|gb|AAD29267.1|AF107095_2 lactate dehydrogenase [Rhodobacter sphaeroides] gi|77388823|gb|ABA80008.1| Lactate dehydrogenase [Rhodobacter sphaeroides 2.4.1] gi|126104911|gb|ABN77589.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17029] Length = 387 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA L L+LK + L D G ++ GG S + Sbjct: 235 WGKIARLRDKWGGKLILKGI---LDEEDARRAADFGADAIIVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R ++ + GG+R+G D+LK++ +GA + ++ Sbjct: 292 PPI-----------------VRAVGDQVEIHMDGGIRSGQDVLKALAMGAKGTFIGRSYI 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A V A+E + KE +SM L G K V+ L Sbjct: 335 YGLGAMGEAGVRRALEVIWKELDISMALCGEKDVKAL 371 >gi|332559296|ref|ZP_08413618.1| L-lactate dehydrogenase [Rhodobacter sphaeroides WS8N] gi|332277008|gb|EGJ22323.1| L-lactate dehydrogenase [Rhodobacter sphaeroides WS8N] Length = 387 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA L L+LK + L D G ++ GG S + Sbjct: 235 WGKIARLRDKWGGKLILKGI---LDEEDARRAADFGADAIIVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R ++ + GG+R+G D+LK++ +GA + ++ Sbjct: 292 PPI-----------------VRAVGDQVEIHMDGGIRSGQDVLKALAMGAKGTFIGRSYI 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +A V A+E + KE +SM L G K V+ L Sbjct: 335 YGLGAMGEAGVRRALEVIWKELDISMALCGEKDVKAL 371 >gi|221636250|ref|YP_002524126.1| FMN-dependent dehydrogenase [Thermomicrobium roseum DSM 5159] gi|221157390|gb|ACM06508.1| FMN-dependent dehydrogenase [Thermomicrobium roseum DSM 5159] Length = 409 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L D P LLK + L D + G ++ GG + + + Sbjct: 239 WTDLAWLRKQWDGPFLLKGI---LHPEDARRAVALGADAISVSNHGGNNLDGAPASIRVL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + + GG+R G D++K++ LGA + +L Sbjct: 296 PVI-----------------VEAVGGQIEILLDGGIRRGSDVVKALALGARAVLIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V +E LR ++ +G V +L + +I Sbjct: 339 WGLAANGEAGVRNVLELLRSGIDETLLGIGKASVHDLGPDDLVI 382 >gi|307941750|ref|ZP_07657105.1| L-lactate dehydrogenase (cytochrome) [Roseibium sp. TrichSKD4] gi|307775358|gb|EFO34564.1| L-lactate dehydrogenase (cytochrome) [Roseibium sp. TrichSKD4] Length = 378 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 118/362 (32%), Gaps = 79/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + N+ F L R ++ D +G+ +S P+ ++ MTG + E Sbjct: 33 ESTYRDNEAAFQRQKLRQRV--AVNIDNRSVKTTMIGEDVSMPVALAPVGMTGMQHADGE 90 Query: 74 RINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISNL 123 + A AAE+ V M+V S + F+L R ++ + +++ Sbjct: 91 ILA---AQAAEEFGVPYTLTTMSVCSIEDVAEHTTKPFWFQLYVMRDRGFSESLMKRAHV 147 Query: 124 -GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-----LQEIIQPN--------GNTNFA 169 G L +Q Q + +GL P L ++P +F Sbjct: 148 AGCSALVLTLDLQVLGQRHRDIK-NGLSTPPKPKPHVLLDLALKPRWCWNMLRTKRRDFG 206 Query: 170 DLSSKI--------------------------ALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ ++ + D L+LK + D ++ Sbjct: 207 NIVGRVSGVGDMGSLAEWTAQQFDPTLDWSSVEWVKKHWDRKLILKGIN---DVEDAKIA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++ ++ GG + D+ DI ++ + Sbjct: 264 AETDADGIVVSNHGGRQLDGAAASYDVLRDI-----------------VDAVGDKVEVYM 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R+G DI K++ +GA + ++ V +E + KE V+M L G Sbjct: 307 DGGIRSGQDIFKAVAMGAKSTFIGRSYIYGLGAMGKAGVTKTLEIMHKELDVTMGLCGET 366 Query: 323 RV 324 + Sbjct: 367 DI 368 >gi|167577127|ref|ZP_02370001.1| FMN-dependent dehydrogenase [Burkholderia thailandensis TXDOH] Length = 412 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 112/367 (30%), Gaps = 73/367 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + + N+ F W L + L + + +LG + P+L+ + G Sbjct: 33 ANSETTMRANENDFARWRLRQKVLTGVQSSAAGLNATYLGAEHRLPILLGPVGFAGMYWP 92 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS---------FELRQYAPHTVLIS 121 I AA++ + + + + + A +S F R + Sbjct: 93 RGEIAA--GRAADEAGIGQCLSTFSICSLEEVAAARSGPLYFQLYMFRDRDLTEDILARC 150 Query: 122 NLGAVQLNY-----------DFGVQKAHQAVHVLGADGL--------------------- 149 V + + + +A L A G+ Sbjct: 151 RQANVDVVVLTVDTCHIPIRERDARNGFRAATRLSARGVWSMLKCPGWCVGALSNGVPKI 210 Query: 150 -------FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + L++ + + + L + +++K + L D Sbjct: 211 GNVLRYPDLGTSLLEQSAAVGRMIDSRLSWADVKWLRARWPGKIIIKGI---LDPDDARR 267 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G+ I+ GG S D+ +I + + Sbjct: 268 AVDEGVDGIVISNHGGRQLDPAPSAMDVLPEIAD-----------------AVGTRTEIL 310 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R G D++K++ LGAS + ++ V +E L+ E + ++ ++G Sbjct: 311 MDGGVRRGADVIKALALGASAVSIGRAYIYGLGAAGETGVSRCLELLKGEMLPALNMMGF 370 Query: 322 KRVQELY 328 + + EL Sbjct: 371 ESIAELR 377 >gi|89901128|ref|YP_523599.1| L-lactate dehydrogenase (cytochrome) [Rhodoferax ferrireducens T118] gi|89345865|gb|ABD70068.1| L-lactate dehydrogenase (cytochrome) [Rhodoferax ferrireducens T118] Length = 385 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 111/363 (30%), Gaps = 78/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F R IS D +G+ ++ P+ ++ + TG + E Sbjct: 33 ESTYRANEADFQPIKFRQRV--AISMDNRSTRSTMIGQDVAMPVALAPVGLTGMQHADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVL-------- 119 + A AA+ V + + + + A + F++ + Sbjct: 91 ILA---ARAAKAFGVPFTLSTMSICSIEDVAAGTGNHPFWFQVYVIRDRGFIERLIERAR 147 Query: 120 ISNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFA 169 +N A+ L D + Q+ + L A N + + +P F Sbjct: 148 AANCSALVLTLDLQIIGQRHKDLKNGLSAPPKLTLPNIINMMSKPRWGIGMLGTRRRGFG 207 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ + + + L+LK + D L Sbjct: 208 NIVGHVGGVEDMGSLSEWSSKQFDPTLNWNDVEWIKKRWGGKLILKGIQ---DPEDARLA 264 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + +G ++ GG ES I + + Sbjct: 265 VNAGADALIVSNHGGRQLDGAESSIRALPRI-----------------VEAVGKDIEIHM 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTK 322 GG+R+G D+LK+ LGA + F+ +A V A+E + KE ++M G Sbjct: 308 DGGVRSGQDVLKARALGARGVYIGRAFIYGLGAMGEAGVSKALEIIHKELDLTMAFCGRT 367 Query: 323 RVQ 325 + Sbjct: 368 DIN 370 >gi|270261499|ref|ZP_06189772.1| (S)-mandelate dehydrogenase [Serratia odorifera 4Rx13] gi|270044983|gb|EFA18074.1| (S)-mandelate dehydrogenase [Serratia odorifera 4Rx13] Length = 385 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 68/371 (18%), Positives = 115/371 (30%), Gaps = 84/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F W + L + S ++ ++L+ PLLI+ TG N + Sbjct: 31 AEDEHTLRGNRVAFGQWQFVPPVLRDASRR--TLNIRLWQQELAAPLLIAP-TGYNGMLR 87 Query: 73 ERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + LA +A + ++ S + +D F+L V G +Q Sbjct: 88 YQADLMLARSARAFGIPYIQSTVSTASLEEIAADGQGQHWFQLYVLRDRQVTA---GLLQ 144 Query: 128 LNYDFGVQKAHQAVHVLGADG---------------------LFLHLNPLQEIIQPNGNT 166 G +V + + LH L ++P G Sbjct: 145 RALAAGCNTLVLSVDAVHFGNRERDRRSYRRPMKLSLASLCDVALHPRWLWHTLRPAGMP 204 Query: 167 NFADL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMD 199 F +L + + LL+K + L D Sbjct: 205 GFGNLQPYLPAERQRGLSGAAYFAREMDAALNWQTLDWVRQCWPGKLLVKGI---LHPQD 261 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYC-N 257 L +G ++ GG G P+SL R C Sbjct: 262 ARQALDAGADGIVLSNHGGRQLD-------------------GSVAPISLLPAVRAACGP 302 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 A + G R G D++K++ LGA+ L P L A+ A+ +E ++ Sbjct: 303 TATILIDSGFRRGTDVVKALALGANAVLLGRPLLYGVALAGQAGATQALRIFSEEIDRTL 362 Query: 317 FLLGTKRVQEL 327 LG VQEL Sbjct: 363 AQLGCSSVQEL 373 >gi|315937103|gb|ADU56111.1| hypothetical protein CA878-33 [uncultured organism CA878] Length = 358 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 104/351 (29%), Gaps = 68/351 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--------- 65 + + N+ + +I R L + VE LG++ + P++++ + Sbjct: 31 AETSLVANRTALERVFVIPRML--RDLVDSTTEVEVLGRRAALPVVVAPVAYQRLFHPEG 88 Query: 66 -----------GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G + + L A Q D +S EL + A Sbjct: 89 ELAAARAARDAGVPYSICTLSSVPLEEIAAVGGRPWF---QLYWLRDEK--RSLELVRRA 143 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL--- 171 + + V + + + + L + + + Sbjct: 144 EDAGCEAIVFTVDVPW-----MGRRLRDMRNGFALPEWVTAANFDAGTAAHRRTRGVSAV 198 Query: 172 ------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 +A + + D+PL+LK V L+ D + +G ++ GG Sbjct: 199 ADHTAREFAPATWESVAAVRAHTDLPLVLKGV---LAVEDARRAVAAGADGIVVSNHGGR 255 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 ++ +I + + GG+R G D+LK+ L Sbjct: 256 QLDGAVPGIEVLGEIAD-----------------AVSGGCEVLLDGGIRGGGDVLKAAAL 298 Query: 280 GASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 GAS + P A D +E L EF +M L G + V Sbjct: 299 GASAVLVGRPVMWGLAAAGQDGARRVLELLAAEFRDAMGLAGCESVSAARR 349 >gi|161524869|ref|YP_001579881.1| L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] gi|189350381|ref|YP_001946009.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] gi|160342298|gb|ABX15384.1| L-lactate dehydrogenase (cytochrome) [Burkholderia multivorans ATCC 17616] gi|189334403|dbj|BAG43473.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 405 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 22/164 (13%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + D + +A + + L++K + LS D G ++ GG Sbjct: 255 RDHLDW-THLAQIRAQWKGNLVVKGI---LSVDDALAARDVGADGIILSNHGGRQLDGTV 310 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S + D+ + GG R G DILK+I LGA + Sbjct: 311 SPMRILRDV-----------------VTALEPAFPVMLDGGFRRGADILKAIALGARMVF 353 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + PF A+ V AI L++E M +LG + +L+ Sbjct: 354 VGRPFNYAMAVAGEAGVTHAIRLLQEEVDRDMAMLGARTCLDLH 397 >gi|313902309|ref|ZP_07835714.1| Lactate 2-monooxygenase [Thermaerobacter subterraneus DSM 13965] gi|313467460|gb|EFR62969.1| Lactate 2-monooxygenase [Thermaerobacter subterraneus DSM 13965] Length = 392 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 112/350 (32%), Gaps = 74/350 (21%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK--------------------------- 54 N++ FD W L R L + D S E LG++ Sbjct: 65 NRQAFDRWRLRPRML--RDVAQRDLSTELLGRRLPAPVLLAPVGVLSVVHGEAERAPARA 122 Query: 55 ---LSFPLL---ISSMT--GGNNKMIERI-------NRNLAIAAEKTKVAMAVGSQRVMF 99 L P + +SS+T G M + R+ I A + A A G + ++ Sbjct: 123 AARLGLPFIASTVSSVTLEGIAEAMGDGPRWFQLYPARDREIMASLIRRAEAAGYEALVV 182 Query: 100 S-DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + D + E + + G D + +G L LQ Sbjct: 183 TVDTTMLGWREHDLENAYLPFLLGEGIANYLSDPAFRARLPRPPEEDREGAI--LQFLQV 240 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + P + ++A + +P+L+K + D ++ G++ ++ GG Sbjct: 241 FVNP------SFTWDELAFIRGQTRLPVLVKGITH---PGDARQAVECGVQGIIVSNHGG 291 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + D ++ + G+R G D+LK++ Sbjct: 292 RQVDGAVAALDALPEV-----------------VEAVAGRVAVLFDSGIRRGADVLKALA 334 Query: 279 LGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 LGA + P++ A V + L + ++M L G + E+ Sbjct: 335 LGARAVLVGRPYVYALAAAGEAGVARLLRHLLADLDLTMGLCGVRSAAEI 384 >gi|145228637|ref|XP_001388627.1| hypothetical protein ANI_1_238014 [Aspergillus niger CBS 513.88] gi|134054718|emb|CAK43559.1| unnamed protein product [Aspergillus niger] Length = 401 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 68/368 (18%), Positives = 132/368 (35%), Gaps = 80/368 (21%) Query: 21 RNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM---TGGNNKMIERIN 76 +N+ F W +I L P F D S GKK + P+ I+ + T + + Sbjct: 60 KNRSAFQSWSVIPSRLVPSAEF--PDLSTTLFGKKYASPIAIAPVGVQTIFHPEG----E 113 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-------FEL------------------R 111 R +A AA V + + ++ A + F+L + Sbjct: 114 RAVARAAAGLDVPYTLSTATATSTEDVAEANGADGKRWFQLYWPGNEHNDITVSLLERAK 173 Query: 112 QYAPHTVLIS----NLGAVQLNYDFGVQKAHQA----VHVLGADGLF---LHLNPLQEII 160 + ++++ LG + D G +A V + +D +F + +E+ Sbjct: 174 KSGYDVLVVTLDTYILGWRPTDMDNGYNPFLRADSIGVEMGFSDPVFRRYIRDKFGKEVE 233 Query: 161 QPNGN----------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + G + +A L S + P++LK V S D ++ G++ Sbjct: 234 EDKGTAAGEWTKIVFPGVSHSWEDLAFLRSHWEGPIVLKGVQ---SVGDARRAVECGMQG 290 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + GI + + + G+R G Sbjct: 291 IVVSNHGGRQMDGGVGSLTVLP---------GI--------VDAVGEKIEVLFDSGVRCG 333 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV--QEL 327 D++K++ LGA + + P++ A+ + V + SL E +S+ L G + V ++L Sbjct: 334 ADVVKALALGAKMVLVGRPYVYGLAIAGEEGVRHVLRSLLGEVQLSLHLGGIRSVKKEDL 393 Query: 328 YLNTALIR 335 L+R Sbjct: 394 -NRDCLVR 400 >gi|317401653|gb|EFV82278.1| L-lactate dehydrogenase [Achromobacter xylosoxidans C54] Length = 387 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L++K + L D +L SG ++ GG S Sbjct: 239 WDDVEWIKQRWGGKLIIKGI---LDVEDAQLAANSGADALIVSNHGGRQLDGAMSSIAAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R+G DILK++ LGA + FL Sbjct: 296 PSIAD-----------------AVGSKIEVWMDGGVRSGQDILKAVALGARGAMIGRAFL 338 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 V +E L KE +M L G + ++ Sbjct: 339 YGLGAYGQAGVKRVLEILYKEMDTTMALCGRRNIE 373 >gi|293602708|ref|ZP_06685149.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292818899|gb|EFF77939.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 387 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L++K + L D +L SG ++ GG S Sbjct: 239 WDDVEWIKQRWGGKLIIKGI---LDVEDAQLAANSGADALIVSNHGGRQLDGAMSSIAAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + GG+R+G DILK++ LGA + FL Sbjct: 296 PAIAD-----------------AVGSKIEVWMDGGIRSGQDILKAVALGARGTMIGRAFL 338 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 V +E L KE +M L G + ++ Sbjct: 339 YGLGAYGQAGVTRVLELLYKEMDTTMALCGRRNIE 373 >gi|84501741|ref|ZP_00999913.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Oceanicola batsensis HTCC2597] gi|84390362|gb|EAQ02921.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Oceanicola batsensis HTCC2597] Length = 382 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 108/374 (28%), Gaps = 101/374 (27%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 D I R++ DD L L + D + LG+ S P +S MTG Sbjct: 35 ADGAIRRSRAALDDVLLAPAVLKGRTV--PDLATTLLGRSYSRPWGVSPVGMTGLFWPGA 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E LA + + + + APH + + G QL Sbjct: 93 EV---TLAQHCAARNLPFGLSTVAAA----------SVEDVAPH---LGDQGWFQLYPPR 136 Query: 133 GVQKAH---QAVHVLGADGLFLHLN-------------------------PLQEIIQPN- 163 + + G L L ++ LQ +++P+ Sbjct: 137 DPEHCEDLLKRAKDAGFHTLVLTVDVPGPSRRERQRRGGLTTPPRITPRLFLQSVLRPHW 196 Query: 164 -------GNTNFADL----------------------SSKIALLSSAMDVPLLLKEVGCG 194 G + L + L D P++ K V Sbjct: 197 AVAVARAGTPSVRGLAKYASPHEPARHVGLAPHAAPDRDLLKRLRDMWDGPVVAKGV--- 253 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 L D + G+ ++ GG + + +L + R Sbjct: 254 LVPGDAVMLRDLGVDAVWVSNHGGRQFDGAPG------------------SAAALPLVRA 295 Query: 255 -YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEF 312 + I G + +G+D+L++I LGA L P+L A + L ++ Sbjct: 296 AVGPDYPLIFDGAVESGLDVLRAIALGADFVMLGRPWLWGVASFGARGAAHVTHILTEDV 355 Query: 313 IVSMFLLGTKRVQE 326 M +G R +E Sbjct: 356 TSGMIQMGISRPEE 369 >gi|218193862|gb|EEC76289.1| hypothetical protein OsI_13796 [Oryza sativa Indica Group] Length = 268 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 95/287 (33%), Gaps = 39/287 (13%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 S LG K+S P++I+ KM A + V R + Sbjct: 2 SATVLGFKISMPIMIAPSA--MQKMAHPDGEYATARAASAAGTIMVYKDRNVVEQ----- 54 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVLGADGLFLHLNPLQEIIQPNGN 165 +R+ + A+ L D +A + +L L + + + Sbjct: 55 --LVRRAE-----RAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMD 107 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 ++ S + ++ +D L K+V S + + SG ++ G + Sbjct: 108 K--SNDSGLASYVAGQIDRTLSWKDVKWLQSITEA--AVHSGAAGIIVSNHGARQLDYVP 163 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + T +LE GG+R G D+ K++ LGA+ Sbjct: 164 A------------------TISALEEVVTAAAGRIPVYLDGGVRRGTDVFKALALGAAGV 205 Query: 285 GLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + P + A + V + +R+EF ++M L G + ++ Sbjct: 206 FIGRPVVFALAAEGEAGVRNVLRMMREEFELTMALSGCTSLADITRA 252 >gi|13475754|ref|NP_107321.1| L-lactate dehydrogenase [Mesorhizobium loti MAFF303099] gi|14026510|dbj|BAB53107.1| L-lactate dehydrogenase [Mesorhizobium loti MAFF303099] Length = 378 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 21/162 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L+LK + L D + K+G ++ GG S + Sbjct: 235 WKDVAWIKERWGGKLILKGI---LDKEDALMAAKTGADAIVVSNHGGRQLDGASSSIMVL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I D + GG+R+G D+LK++ LGA + PFL Sbjct: 292 EEIADTVGD-----------------RIEVHMDGGIRSGQDVLKALCLGAKGTYIGRPFL 334 Query: 292 KPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + V A+E +RKE +++ L G + V ++ + Sbjct: 335 YGLGALGKEGVTKALEIIRKEMDITLALCGKRLVTDMGKDQL 376 >gi|229492591|ref|ZP_04386394.1| lactate 2-monooxygenase [Rhodococcus erythropolis SK121] gi|229320577|gb|EEN86395.1| lactate 2-monooxygenase [Rhodococcus erythropolis SK121] Length = 412 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 125/358 (34%), Gaps = 61/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEV-DPSVEFLGKKLSFPLLISSM------- 64 + + N + FD ++ R L + + D SVE LG +L+ P+L + + Sbjct: 70 ASTERTAESNLRAFDKHAIVPRMLRGTAAPDARDLSVEVLGTRLAAPILTAPVGVLGLVH 129 Query: 65 -----TGGNNKMIERINRNLAIAAEKT--KVAMAVGS----QRVMFSDHNAIKSFELRQY 113 G+ I L+ AA T VA A G Q +D +SF +R+ Sbjct: 130 DDAEVAVGSVTAELGIGSILSTAASSTIEDVAAASGENWWYQLYWPADDELAESF-VRRA 188 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQ-AVHVLGADGLFLHLN----------PLQE---- 158 L A + + + L A G+ +L+ P +E Sbjct: 189 ETAGAKAIVLTADTPGMGWRPRDLELGHLPFLQAKGIANYLSDPVFRAKLATPPEESAEA 248 Query: 159 -----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + N A + IA L +P+ +K + + D + +G + Sbjct: 249 LQIAVLTWVSLFGNHAVRIADIAKLRQWTTLPIAVKGI---VHPDDAREAVAAGANGIVV 305 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG S D + +E + G+R G D+ Sbjct: 306 SNHGGRQVDGSISALDALGPVAD-----------------AVGHEVDILMDSGIRCGADV 348 Query: 274 LKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +K++ LGA P++ + +D V A+ SL + ++M L G V E+ + Sbjct: 349 IKALALGADAVLYGRPWVYGLGLAGADGVRHALRSLLADLDLTMGLAGLASVAEIDRS 406 >gi|260579150|ref|ZP_05847042.1| L-lactate dehydrogenase [Corynebacterium jeikeium ATCC 43734] gi|258602749|gb|EEW16034.1| L-lactate dehydrogenase [Corynebacterium jeikeium ATCC 43734] Length = 425 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 102/367 (27%), Gaps = 82/367 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 ++ ++R ++ F D L VD + E G K S P I+ Sbjct: 61 ADEEISMNRARQAFRDVEFHPSIL--NDVSNVDTTAEIFGGKSSLPFGIAPTGFTRLMQT 118 Query: 65 --------------------TGGNN--------------------KMIERINRNLAIAAE 84 T G I+ L A Sbjct: 119 EGELAGASAAGSAGIPFCLSTLGTTSIEDVQKANPNGRNWFQLYVMKEREISYGLVERAA 178 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 K + V + +A F + +++ + +DF Sbjct: 179 KAGFDTLLFTVDTPVAGNRLRDARNGFSIPPEISLGTVVNAIPRPWWWWDF------LTT 232 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L L + E++ + + + + L++K V + D + Sbjct: 233 PPLEFASLTSTGGTVGELLDSAMDPSIK--FEDLKTIREMWPGKLVVKGVQ---NLPDSK 287 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ ++ GG R L ++ R N+ Sbjct: 288 KLADLGVDGIILSNHGGRQLDRAPVPFQLLPEV-----------------VREVGNDVDV 330 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 G+ NG DI+ +I GA + +L M +A V AIE L E +M LL Sbjct: 331 AMDTGIMNGADIVAAIAKGAKFTLIGRAYLYGLMAGGEAGVNRAIEILASEVRRTMRLLQ 390 Query: 321 TKRVQEL 327 + EL Sbjct: 391 VSSLDEL 397 >gi|154287082|ref|XP_001544336.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407977|gb|EDN03518.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 337 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 29/167 (17%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++P++LK + + I ++ ++ GG Sbjct: 172 QHTNLPIVLKRLQTHEDAY-IASLHAPQVKAIILSNHGGREMDTA--------------- 215 Query: 240 DWGIPTPL-SLEMARPYCNEA----QFIASGGLRNGVDILKSIILGASLGGLAS-PFLKP 293 PT + ++ R +C E + GG+R G D++K++ LGA G+ P Sbjct: 216 ----PTAVHTIMEIRKHCPEVFGKVEVWVDGGIRRGTDVVKALCLGAQCVGVGRAPLFGL 271 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL---YLNTALIRHQ 337 + V +E L E +M LLG ++V +L ++N + Q Sbjct: 272 GAGGVEGVERVLEILSTETATAMRLLGVEKVDDLGMQHINARAVEQQ 318 >gi|218459674|ref|ZP_03499765.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli Kim 5] Length = 145 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + A LK + +S D + ++ G ++ GG S D + Sbjct: 1 DDVAEMVRAWGGHFCLKGI---MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQLA 57 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I + + GG++ G +LK++ LGA GL +L Sbjct: 58 EI-----------------VDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLF 100 Query: 293 P-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P A V A+E++R E M L+G V +L + R Sbjct: 101 PLAAAGRPGVERALETMRTEIERGMKLMGCTSVDQLTRSNLRFR 144 >gi|54024201|ref|YP_118443.1| putative dehydrogenase [Nocardia farcinica IFM 10152] gi|54015709|dbj|BAD57079.1| putative dehydrogenase [Nocardia farcinica IFM 10152] Length = 390 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L PLL+K + D + G ++ GG + + L Sbjct: 239 WADLAWLREQWSGPLLIKGITH---PDDARRAVDIGATAISVSNHGGNNLDSTPAAIRLL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A ++ + + GG+R G D++K++ LGA + P+L Sbjct: 296 P---------GI--------AEAVGDQLEVLLDGGVRRGSDVVKAVALGARAVMIGRPYL 338 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V +E LR+ +++ LG + ++ L+ Sbjct: 339 WGMAAGGERGVHNVLEILRQGIDSTLYGLGRADIHDVRAEDVLV 382 >gi|257068379|ref|YP_003154634.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Brachybacterium faecium DSM 4810] gi|256559197|gb|ACU85044.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Brachybacterium faecium DSM 4810] Length = 418 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 106/367 (28%), Gaps = 82/367 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + +DR+ + F+D L VD + + LG + P I+ Sbjct: 59 AEGEISMDRSVEAFEDIEFHPSILH--DVSTVDTTAQILGGSSAQPFGIAPTGFTRLMQT 116 Query: 65 --------------------TGGNNKMIE--------------------RINRNLAIAAE 84 T G + E I+ L A Sbjct: 117 EGEIAGASAAGAAGIPFTLSTLGTTSIEEVHAANPLGRNWFQLYVMKQREISYGLVERAA 176 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 + + V + ++ F + +I+ + +DF Sbjct: 177 QAGYDTLYFTVDTPVAGARLRDSRNGFSIPPQLSLGTVINAIPRPWWWWDFLTTA----- 231 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L L + E++ + + + +A + +K V + D + Sbjct: 232 -KLEFASLSQTGGTVGELL--DSAMDPSIDVEDLAEIRRMWPGKFAVKGVQ---TLEDAK 285 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ ++ GG R L + AR ++ + Sbjct: 286 KLADLGVDAIVLSNHGGRQLDRAPVPFHLLPQV-----------------AREVGDDMEI 328 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 I G+R+G DI+ +I LGA + +L M V AI L + +M LL Sbjct: 329 ILDTGIRSGADIVAAIALGADFTLIGRAYLYGLMAGGRQGVDRAIAILSDQVERTMKLLQ 388 Query: 321 TKRVQEL 327 +Q+L Sbjct: 389 VPTLQDL 395 >gi|296138491|ref|YP_003645734.1| L-lactate dehydrogenase (cytochrome) [Tsukamurella paurometabola DSM 20162] gi|296026625|gb|ADG77395.1| L-lactate dehydrogenase (cytochrome) [Tsukamurella paurometabola DSM 20162] Length = 417 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 103/360 (28%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D R L VD + LG + P I+ TG M Sbjct: 58 AEAELSLARARQAFSDIEFHPRIL--RDVAHVDTTRTVLGGPSALPFAIAP-TGFTRMMQ 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ-----------------------------RVMFSDHN 103 A AA + + ++ + + D Sbjct: 115 TEGELAGARAATRAGIPFSLSTMGTASIEEVADAGRGGRQWFQLYMWRDRERSMALVDRA 174 Query: 104 AIKSFELRQYAPHTVLIS-----NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 A ++ + + + ++ AV FL PL Sbjct: 175 AQAGYDTLLVTVDVPVAGARLRDKRNGMTIPPALTLRTIVDAVPRPHWWIDFLTTEPLSF 234 Query: 159 IIQPNGNTNFADLSS----------KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + +L +A + +++K V + D G+ Sbjct: 235 ASLDRWSGTVGELLDSMFDPTVDYSDLAWIRDQWPGKVVVKGVQ---TLDDARRCADLGV 291 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L +PT + + + G+ Sbjct: 292 DGIVLSNHGGRQLDRAPVPFHL------------LPTVAA-----ELGGTTEILLDTGIM 334 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ ++ LGA + +L M +A V AI L E +M LLG + EL Sbjct: 335 SGADIVAAVALGARSTLVGRAYLYGLMAGGEAGVDRAITILGDEVRRTMRLLGANSLDEL 394 >gi|240170587|ref|ZP_04749246.1| L-lactate dehydrogenase (cytochrome) LldD1_1 [Mycobacterium kansasii ATCC 12478] Length = 390 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 22/163 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 ++ L S ++PL++K + D G+ + GG Sbjct: 245 CWDDLSWLRSLTELPLIVKGICH---PDDARRAKDGGVDGIYCSNHGGRQ---------- 291 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+P L + + G+R+G D++K++ +GA+ G+ P+ Sbjct: 292 --------ANGGLPALDCLPAVVEAADGLPVLFDSGIRSGADVIKALAMGATAVGVGRPY 343 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ D +V + + E + M + G ++L +T Sbjct: 344 AYGLALGGVDGIVHVLRMMLAEADLIMAVDGYPTRKDLTPDTL 386 >gi|85373925|ref|YP_457987.1| hypothetical protein ELI_05490 [Erythrobacter litoralis HTCC2594] gi|84787008|gb|ABC63190.1| hypothetical protein ELI_05490 [Erythrobacter litoralis HTCC2594] Length = 384 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 68/394 (17%), Positives = 115/394 (29%), Gaps = 101/394 (25%) Query: 8 DHINIVCKDP-GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN +DD L+ L E+D S +G++ + PLL+S T Sbjct: 26 DYIDGAADDELTKARNTAAYDDVDLVPDVLAG--VAEIDTSCTIMGRESALPLLLSP-TA 82 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + +A AAEK + + S + + + + A L + Sbjct: 83 VQRAFHWQGETAVAKAAEKFGLWFGISS----------LATRSIEEIA-ALTQGPKLFQL 131 Query: 127 QLNYDFGVQKAHQAVHVLGA---DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS---- 179 ++ D G+ + A D L L ++ I+ + S Sbjct: 132 YVHKDKGLN--QSMIERCQAAQFDALALTVDT---IVSGKRERCLRSGFTTPPKFSPSAV 186 Query: 180 ----------------SAMDVPLLLKEVGCG------------------LSSMDIELG-- 203 +P L V G ++ Sbjct: 187 WSYATRPRWTLDYLFRERFRLPNLDTHVAEGSREAVSIAEYFNTMLDTSMNWDTAAKIRQ 246 Query: 204 --------------------LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 ++ G I+ GG + F G Sbjct: 247 DWGGTFCLKGVMSAGDARRAVEIGADAIMISNHGGRQLDGSRAP----------FDQLG- 295 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVV 302 E+ + E + I GG+R G LK++ GA+ +L A V Sbjct: 296 ------EIVKAVGGEIEIICDGGVRRGTHALKAVSAGATAASGGRLYLYALAAAGQPGVE 349 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 AI L+ E M L+G V +L + R+ Sbjct: 350 RAIGILKDEIERGMRLMGVTSVDQLTADRLRWRY 383 >gi|323944237|gb|EGB40316.1| L-lactate dehydrogenase [Escherichia coli H120] Length = 149 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 20/145 (13%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL- 249 + L D ++ G ++ GG + + + +L Sbjct: 3 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALP 44 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESL 308 +A + +A G+RNG+D+++ I LGA L FL A V + + Sbjct: 45 AIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLI 104 Query: 309 RKEFIVSMFLLGTKRVQELYLNTAL 333 KE V+M L G K + E+ ++ + Sbjct: 105 EKEMKVAMTLTGAKSICEITQDSLV 129 >gi|240167695|ref|ZP_04746354.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium kansasii ATCC 12478] Length = 390 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIAWLRQLWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVAA-----------------AVGDQTEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG VQ+L + ++ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHSSVQDLRPDDIIV 380 >gi|300788817|ref|YP_003769108.1| L-lactate 2-monooxygenase [Amycolatopsis mediterranei U32] gi|299798331|gb|ADJ48706.1| L-lactate 2-monooxygenase [Amycolatopsis mediterranei U32] Length = 387 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ L D P++LK + D ++G+ ++ GG + Sbjct: 243 WDQLPFLREHWDGPIVLKGIQH---VADARRAAEAGMDGVVVSNHGGRQVDGALGALEAL 299 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI + + + G+R G D+LK++ LGA + P++ Sbjct: 300 P---------GI--------VAAVGDRIEVLFDSGVRTGSDVLKALALGARAVLVGRPWV 342 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A D V + SL +F ++M L G + + +L Sbjct: 343 YGLAHAGEDGVRHVLRSLLADFDLTMGLSGHRTLADL 379 >gi|311900092|dbj|BAJ32500.1| putative oxidoreductase [Kitasatospora setae KM-6054] Length = 359 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 109/345 (31%), Gaps = 56/345 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ F+ L RAL + D + LG +L P+ I+ M +++ Sbjct: 31 AERTLAANRARFEQCRLRPRAL--VDVSATDQGLTLLGSRLETPIGIAPMA--YHQLFHP 86 Query: 75 INRNLAIAAEKTKVAMAVG---------SQRVMFSDHNAIKSFELRQYAPHTVLISN--- 122 A A+ V S + ++ + LR+ L+ Sbjct: 87 EGEVATARAAGRAGALLVAGIFASRTLESIADAATGPLWLQLYWLRRRDALAALVERAEA 146 Query: 123 LGAVQLNYDFGVQKA-HQAVHVLGADGLFLH---LNPLQEIIQP--NGNTNFADLSSKIA 176 G L + + + H +N Q ++ + ++ Sbjct: 147 AGYRALVLTVDAPRIGRRLRDARNGFAIPPHVRAVNVDQAVMAASHRAEHGSSGIADHAK 206 Query: 177 L-------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 L +P++LK + L++ D L + G ++ GG Sbjct: 207 EQFDPTLTWADLAWLRDRTRLPIVLKGI---LTAEDTRLAAEHGADAVLVSNHGGRQLDG 263 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 ++ + GG+R G D+ ++ LGA Sbjct: 264 ALPSLAALPEVAA-----------------AAPPNLPVLLDGGVRTGTDVALAVALGARA 306 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P L A D + V A++ L+ E ++ LLG R+ +L Sbjct: 307 VLLGRPILWALAADGENGVAQALDLLKAELDDTLALLGRPRLADL 351 >gi|146276402|ref|YP_001166561.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17025] gi|145554643|gb|ABP69256.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sphaeroides ATCC 17025] Length = 387 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 21/166 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA L L+LK + L D G ++ GG S + Sbjct: 235 WGKIARLRDKWGGKLILKGI---LDEEDARRAADFGADAIIVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R ++ + GG+R+G D+LK++ +GA + ++ Sbjct: 292 PPI-----------------VRAVGDQVEIHMDGGIRSGQDVLKALAMGAKGTYIGRSYI 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A V A+E + KE VSM L G K V+ L + L+ Sbjct: 335 YGLGAMGEAGVRRALEVIWKELDVSMALCGEKDVKALGPHNLLVPQ 380 >gi|47078302|gb|AAT09795.1| NocN [Nocardia uniformis subsp. tsuyamanensis] Length = 376 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 110/345 (31%), Gaps = 60/345 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ DD L+ R L + D S +G + P+ ++ M G ++ Sbjct: 42 DEVTLAANRAALDDVALLPRVLAGVQAA--DTSTSLVGTAATLPVAVAPM--GYQCLVHP 97 Query: 75 INR-NLAIAAEKTKVAMAVGSQRV----MFSDHNAIKSFELRQYAPHTVLI--------S 121 A AA V VG+ ++ A F+L ++ + Sbjct: 98 DGEVAAAAAAGAAGVPFTVGTLSSRSVEEIAETGASLWFQLYWLRDRGLVAELVARAEAA 157 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA------------ 169 A+ + D V + V L + + P+ Sbjct: 158 GCRALVITVDVPV-MGRRLRDVRNGITLPRTVRAVHLADGPSSAHEPRQVGSGVAQHTSA 216 Query: 170 ------DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + L + +PL++K V L D ++ G ++ GG Sbjct: 217 VFDPAFGWRD-LEWLRARTRLPLVVKGV---LDPRDATRCVELGASAVVVSNHGGRQLDG 272 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 P+ ++L + A+ + G+R GVD+L+++ LGA+ Sbjct: 273 AA------------------PSAVALPRVVDAVAGAAEVLFDSGVRGGVDVLRALALGAT 314 Query: 283 LGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQE 326 L P L + +E LR EF ++ L G V Sbjct: 315 GVLLGRPILWGLAVGGERGAARVLELLRTEFAQALLLAGCADVDA 359 >gi|67903514|ref|XP_682013.1| hypothetical protein AN8744.2 [Aspergillus nidulans FGSC A4] gi|40741347|gb|EAA60537.1| hypothetical protein AN8744.2 [Aspergillus nidulans FGSC A4] gi|259483058|tpe|CBF78116.1| TPA: FMN dependent dehydrogenase, putative (AFU_orthologue; AFUA_6G02720) [Aspergillus nidulans FGSC A4] Length = 403 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 21/159 (13%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++ L D PL+LK + D +L L++G ++ GG + Sbjct: 246 PHVWDEVSFLRKHWDGPLVLKGIQH---VEDAKLALEAGCDGIVVSNHGGRQVDGAIASL 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 ++ +I ++ + G+R G DI+K++ LGA + Sbjct: 303 EVLPEI-----------------VDAVGDKLTVLFDSGIRTGADIIKALCLGAKGVLVGR 345 Query: 289 PFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 P + +D + A I+ L+ + SM L G V E Sbjct: 346 PVIYGLSIDGKNGAKAVIKGLQADLWQSMSLSGICTVAE 384 >gi|311103263|ref|YP_003976116.1| L-lactate dehydrogenase [cytochrome] 1 [Achromobacter xylosoxidans A8] gi|310757952|gb|ADP13401.1| L-lactate dehydrogenase [cytochrome] 1 [Achromobacter xylosoxidans A8] Length = 387 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 104/365 (28%), Gaps = 77/365 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N+ F L R ++ + +G + PL I+ TG G Sbjct: 34 AWTEGTYHANESDFQKIKLRQRV--AVNMEGRSLRTTMVGHDVVMPLAIAP-TGLTGMQH 90 Query: 71 MIERINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLI 120 I A AA V M++ S + F+L R++ + + Sbjct: 91 ADGEILA--AKAAADFGVPFTLSTMSICSLEDVAEATKKPFWFQLYVMRDREFVANLIDR 148 Query: 121 SNL-GAVQLNYDFGVQ-KAHQAVHVLGADG------------------------------ 148 + G L +Q + + Sbjct: 149 AKAAGCSALVLTLDLQIMGQRHKDIKNGLSTPPKPTLRNLINLATKPRWCMGMLGTKRRT 208 Query: 149 ---LFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + H+ + ++ + + + L++K + L D + Sbjct: 209 FGNIVGHVKGVDDLSLLSSWTADQFDPRLSWDDVEWIKQRWGGKLIIKGI---LDVEDAQ 265 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + SG ++ GG S I ++ + Sbjct: 266 MAANSGADALIVSNHGGRQLDGAMSSIAALPSIAD-----------------AVGSKIEV 308 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G DILK++ LGA + FL V +E L KE +M L G Sbjct: 309 WMDGGVRSGQDILKAVALGARGAMIGRAFLYGLGAYGQAGVKRVLEILYKEMDTTMALCG 368 Query: 321 TKRVQ 325 + ++ Sbjct: 369 RRSIE 373 >gi|332527773|ref|ZP_08403812.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332112169|gb|EGJ12145.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 383 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L+LK + D L ++SG ++ GG ES Sbjct: 235 WNDVEWIKKRWGGKLILKGIQ---DVEDARLAVESGADALVVSNHGGRQLDGAESSIRAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I T + + GG+R+G D+LK++ LGA + FL Sbjct: 292 PAI----------TAE-------VGSRIEVHMDGGIRSGQDVLKAVALGARGTYIGRAFL 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 +A V A+E + KE ++M G KR+ + Sbjct: 335 YGLGAMGEAGVTKALEIIHKELDLTMAFCGRKRIAD 370 >gi|154251218|ref|YP_001412042.1| L-lactate dehydrogenase (cytochrome) [Parvibaculum lavamentivorans DS-1] gi|154155168|gb|ABS62385.1| L-lactate dehydrogenase (cytochrome) [Parvibaculum lavamentivorans DS-1] Length = 400 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 106/370 (28%), Gaps = 84/370 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + +D N F L R L +D S E G + P ++ + G R Sbjct: 51 AEATLDDNVAAFRRLKLRQRVL--RDVSTIDTSAEIFGTQWKIPAALAPV-GFAGMYARR 107 Query: 75 INRNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIKSFELRQYAP 115 A AAEK V + + Q + D ++ R + Sbjct: 108 GEVQAAKAAEKFGVPFTLSTVGICAIEEVAKATSVPFWFQLYVIKDRGYARALMQRAHEA 167 Query: 116 HTVLI------SNLGAVQLNYDFGVQKAHQAVHVLGADG-----------LFLHLNPLQE 158 ++ + LGA + G+ A L + L PL Sbjct: 168 GCPVLVFTVDLAVLGARYRDTRNGMNTAMSLGKKLKVAMDFAKRPGWIRDVALGGKPLDF 227 Query: 159 IIQPNGNTNFADL----------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 N + + + +++K V + D L Sbjct: 228 GNLREAVPNARGFGEFGAWVAQNLDPAMTWKDLEWVRANWPGKIIIKGV---MDREDARL 284 Query: 203 G-LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++ GG + T +L R + Sbjct: 285 AMAEVAPEGIVVSNHGGRQLDGTPA------------------TLDALPAIREEVGDRTV 326 Query: 262 IA-SGGLRNGVDILKSIILGASLG--GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + GG+R+G+DI+K+ GA G A F A V A + ++R+E V+ L Sbjct: 327 LLLDGGIRSGLDIVKARARGADACLLGRAWAF-ALAAQGEAGVKAMLGTMRQEMHVAQAL 385 Query: 319 LG---TKRVQ 325 G + + Sbjct: 386 TGFTRARDID 395 >gi|72163379|ref|YP_291036.1| (S)-2-hydroxy-acid oxidase [Thermobifida fusca YX] gi|71917111|gb|AAZ57013.1| (S)-2-hydroxy-acid oxidase [Thermobifida fusca YX] Length = 402 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L ++K V D + G ++ GG + I + Sbjct: 239 WDDVRWLRELWGGEFMVKGV---FYPDDARRAVDCGATAISVSNHGGNNLDGIPASLRAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ +GA + +L Sbjct: 296 PAV-----------------VEAVGDQVEVLMDGGIRRGSDVVKALAMGAKAVLVGRVWL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V +E LR ++ LG K ++EL N +I Sbjct: 339 WGLAAGGEEGVRQVLEILRSGIDEALIGLGHKSIRELSPNDLVI 382 >gi|226303753|ref|YP_002763711.1| FMN-dependent dehydrogenase [Rhodococcus erythropolis PR4] gi|226182868|dbj|BAH30972.1| putative FMN-dependent dehydrogenase [Rhodococcus erythropolis PR4] Length = 392 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 124/358 (34%), Gaps = 61/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEV-DPSVEFLGKKLSFPLLISSM------- 64 + N + FD ++ R L + + D SVE LG +L+ P+L + + Sbjct: 50 ASTERTAVSNLRAFDKHAIVPRMLRGTAAPDARDLSVEVLGTRLAAPILTAPVGVLGLVH 109 Query: 65 -----TGGNNKMIERINRNLAIAAEKT--KVAMAVGS----QRVMFSDHNAIKSFELRQY 113 G+ I L+ AA T VA A G Q +D +SF +R+ Sbjct: 110 DDAEVAVGSVTAELGIGSILSTAASSTIEDVAAASGDNWWYQLYWPADDELAESF-VRRA 168 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQ-AVHVLGADGLFLHLN----------PLQE---- 158 L A + + + L A G+ +L+ P +E Sbjct: 169 ETAGAKAIVLTADTPGMGWRPRDLELGHLPFLQAKGIANYLSDPVFRAKLATPPEESAEA 228 Query: 159 -----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + N A + IA L +P+ +K + + D + +G + Sbjct: 229 LQIAVLTWVSLFGNHAVRIADIAKLRQWTTLPIAVKGI---VHPDDAREAVAAGANGIVV 285 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG S D + +E + G+R G D+ Sbjct: 286 SNHGGRQVDGSISALDALGPVAD-----------------AVGHEVDILMDSGIRCGADV 328 Query: 274 LKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +K++ LGA P++ + +D V A+ SL + ++M L G V E+ + Sbjct: 329 IKALALGADAVLYGRPWVYGLGLAGADGVRHALRSLLADLDLTMGLAGLASVAEIDRS 386 >gi|15602153|ref|NP_245225.1| hypothetical protein PM0288 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720521|gb|AAK02372.1| LldD [Pasteurella multocida subsp. multocida str. Pm70] Length = 388 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 114/362 (31%), Gaps = 73/362 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ F L R L + + +G+++ PL I+ TG + Sbjct: 35 SESTLHANRNDFQAIKLRQRVL--VDMEGRSLESTMIGQQVKMPLAIAP-TGFTGMVHPD 91 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTV---LIS 121 + A AAEK + M++ S + +A F+L R++ + + + Sbjct: 92 GEIHAARAAEKFGIPFSLSTMSICSIEDVAEHTSAPFWFQLYVMRDREFMRNLIKRAQAA 151 Query: 122 NLGAVQLNYDFGV-----QKAHQAVHVLGADGLFLHLNPLQEIIQ-----PNGNTNFADL 171 A+ L D V + + L +N ++ F ++ Sbjct: 152 KCSALILTADLQVLGQRHRDIKNGLSAPPKPTLRNWINLATKLEWSLKMLGTQRRTFRNI 211 Query: 172 --------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 +A + + L++K + + D E+ +K Sbjct: 212 VGHAKNVGDLSSLTSWTSEQFDPRLSWDDVAEIKALWGGKLIIKGI---MEPEDAEMAVK 268 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 SG ++ GG S +I NE + Sbjct: 269 SGADAIVVSNHGGRQLDGALSSIQALPNI-----------------VSAVGNEIEVWLDS 311 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+ +G D+LK+ +GA FL V +E KE VSM G + + Sbjct: 312 GITSGQDMLKAWAMGARGFMTGKAFLHGLGAYGEAGVHRLLEIFYKEMDVSMAFTGHRNL 371 Query: 325 QE 326 ++ Sbjct: 372 KD 373 >gi|296537092|ref|ZP_06899059.1| lactate 2-monooxygenase [Roseomonas cervicalis ATCC 49957] gi|296262581|gb|EFH09239.1| lactate 2-monooxygenase [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L +P+LLK + L D L L +G+ ++ GG + D Sbjct: 234 WADLPRLRRMTRLPILLKGI---LHPEDARLALAAGMDGIIVSNHGGRQVDGAIAALDAL 290 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + GG+R+G DI K++ LGA L P++ Sbjct: 291 GPV-----------------VAAVEGRLPVLFDGGVRSGADIAKALALGARAVLLGRPYV 333 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ V A ++SL E +++ L G V L + Sbjct: 334 YGLALGGEAGVRAVLQSLAAELDLTLALCGQAGVAALDRS 373 >gi|167564814|ref|ZP_02357730.1| putative L-lactate dehydrogenase [Burkholderia oklahomensis EO147] Length = 381 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + D L++K + L D L +G ++ GG S D Sbjct: 236 WSDVEWVRQRWDGKLIVKGI---LDPRDAILAADAGADAIVVSNHGGRQLDGAMSSVDAL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GG+R G D+LK++ LGA + FL Sbjct: 293 PAI-----------------VDAAGKRIEIWLDGGVRTGQDVLKAVALGARGTMIGRAFL 335 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 A + V +++ + +E +M L G + Sbjct: 336 YGVAALGEEGVFRSLDIIARELDTTMALCGHTDI 369 >gi|221065638|ref|ZP_03541743.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] gi|220710661|gb|EED66029.1| L-lactate dehydrogenase (cytochrome) [Comamonas testosteroni KF-1] Length = 413 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 22/166 (13%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I + L++K + L+ D + G + ++ GG + Sbjct: 262 RDHLNW-KHIERIRQRWQGNLIIKGI---LNEDDAVMAADIGAQGIVVSNHGGRQLDGVV 317 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + + + + G+R G D+LK++ LGA + Sbjct: 318 APLQMLP-----------------YVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVF 360 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 L PF+ A+ + V AI LR E +M +LG + E+ + Sbjct: 361 LGRPFMYAAAVGGAQGVDHAITLLRDEVDRNMAMLGATSMAEITRD 406 >gi|317509342|ref|ZP_07966962.1| FMN-dependent dehydrogenase [Segniliparus rugosus ATCC BAA-974] gi|316252398|gb|EFV11848.1| FMN-dependent dehydrogenase [Segniliparus rugosus ATCC BAA-974] Length = 384 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 107/358 (29%), Gaps = 63/358 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + +RN + + R L + G P+ + + G + Sbjct: 50 AGDEHTQNRNVAALRQYGFVPRML--RDRAARNMRTSLFGTTFDSPVFLCPV-GVLGAVH 106 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---SFELRQYAPHTVLISNLGAVQLN 129 R + A AA + + + + A + +F + Q P + N V Sbjct: 107 PRGDLETAAAARELGAPVVFSTLSAATLEEVAAERGSAFGVFQLYPSSDRELNASFVDRA 166 Query: 130 YDFGVQKAHQAVH---------------------------VLGADGLFLHLNPLQE---- 158 G V + L + +E Sbjct: 167 ERAGFDAIAVTVDTGTLGWRPRDLANGYLPMLQGRCIANYLADPRFLEIAGVRAEEELSP 226 Query: 159 ----IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 ++ + I L S +P+++K + D+ L + G+ + Sbjct: 227 QRAGLVWASIFAQPTFTWDDIDWLRSRTKLPIMIKGL---CDPEDVRLATRHGVDAVLYS 283 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + G+ L A E + G+R+GVD+L Sbjct: 284 NHGGRQ------------------ANGGLAAIDGLAAAVEAAGETPVLFDSGVRDGVDVL 325 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 +++ LGA++ G+ P++ A+ + I L E ++M + + EL + Sbjct: 326 RAVALGAAMVGVGRPYVYGLALAGRRGIEHVIRCLLAEADLTMAVNCYLSLDELKVQR 383 >gi|167571984|ref|ZP_02364858.1| putative L-lactate dehydrogenase [Burkholderia oklahomensis C6786] Length = 381 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + D L++K + L D L +G ++ GG S D Sbjct: 236 WSDVEWVRQRWDGKLIVKGI---LDPRDAILAADAGADAIVVSNHGGRQLDGAMSSVDAL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GG+R G D+LK++ LGA + FL Sbjct: 293 PAI-----------------VDAAGKRIEIWLDGGVRTGQDVLKAVALGARGTMIGRAFL 335 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 A + V +++ + +E +M L G + Sbjct: 336 YGVAALGEEGVFRSLDIIARELDTTMALCGHTDI 369 >gi|33598877|ref|NP_886520.1| L-lactate dehydrogenase [Bordetella parapertussis 12822] gi|33603954|ref|NP_891514.1| L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33568930|emb|CAE35344.1| L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33575007|emb|CAE39673.1| L-lactate dehydrogenase [Bordetella parapertussis] Length = 387 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L+LK + L + D L +SG ++ GG S + Sbjct: 239 WDDVEWIKRRWGGKLILKGI---LDAEDARLAAESGADALIVSNHGGRQLDGAISSINAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK++ LGA + FL Sbjct: 296 PAIAE-----------------AVGSRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFL 338 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+E L KE V+M L G K + ++ Sbjct: 339 YGLGAYGQAGVTRALEILYKEMDVTMALCGHKHISQI 375 >gi|255951072|ref|XP_002566303.1| Pc22g24130 [Penicillium chrysogenum Wisconsin 54-1255] gi|211593320|emb|CAP99701.1| Pc22g24130 [Penicillium chrysogenum Wisconsin 54-1255] Length = 403 Score = 93.8 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P++LK + D L LK G ++ GG D+ Sbjct: 249 WEDLAFLRKNWDGPIVLKGIQH---VEDARLALKYGCEGIVVSNHGGRQVDGAIGSLDVL 305 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I ++ + G+R G D++K++ LGA + P + Sbjct: 306 PEI-----------------VDAVGDKMTVLFDSGIRTGSDVIKALCLGAQAVLVGRPVI 348 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + D ++ L + +M L G +RV++ Sbjct: 349 YGLSIQGRDGARQVLKGLLTDLWQNMGLSGIRRVKD 384 >gi|160901229|ref|YP_001566811.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160366813|gb|ABX38426.1| L-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] Length = 415 Score = 93.8 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 111/375 (29%), Gaps = 76/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 V + + N++ F + + RAL + + DPS E G++ P ++ Sbjct: 59 VEDNASLADNRRAFAELAFVPRAL--VGVAQRDPSFELFGRRYGAPFGVAPMGIAALSAY 116 Query: 64 ------------------MTGGN--------------------NKMIERINRNLAIAAEK 85 M+G + +I+ L A Sbjct: 117 RGDLVLAQAAQQAGVPAIMSGSSLIRLEEVMAAAPHTWFQAYLPGDQGQIDALLDRVAAA 176 Query: 86 T--KVAMAVGSQRVMFSDHNAIKSFELR-QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V + ++N F + P L F + Sbjct: 177 GVQTLVITVDTPVAANRENNVRAGFSTPLRPGPSLAWQGISHPRWLFGSFLKTLWRHGMP 236 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + L + + + +A + L++K + LS+ D L Sbjct: 237 HFENNYAHRGAPILSASVMRDFSDRSHLAWPHLAAIRQRWQGQLVVKGI---LSAADAVL 293 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 G ++ GG + + GI + Sbjct: 294 ARDHGADGLIVSNHGGRQLDGAVAPLRVLP---------GIV---------RAVPGLPVM 335 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+R G D+LK++ LGA + PF A + V A+ LR+E + M +LG Sbjct: 336 LDSGVRRGTDVLKALALGARCVFVGRPFNYAASVAGPAGVTHAMALLREEVLRDMAMLGA 395 Query: 322 KRVQELYLNTALIRH 336 R+ + A +RH Sbjct: 396 TRLD--QVTPACVRH 408 >gi|269126594|ref|YP_003299964.1| (S)-2-hydroxy-acid oxidase [Thermomonospora curvata DSM 43183] gi|268311552|gb|ACY97926.1| (S)-2-hydroxy-acid oxidase [Thermomonospora curvata DSM 43183] Length = 393 Score = 93.8 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L P +LK V D + + G+ ++ GG + + L Sbjct: 239 WDDVKWLREEWGGPFMLKGVTR---VDDAKRAVDIGVTALSVSNHGGNNLDTTPATIRLL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D+ K++ LGA + +L Sbjct: 296 PAIAE-----------------AVGDQVEVLLDGGVRRGGDVAKALALGARAVLIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V EL + +I Sbjct: 339 WGLAANGQAGVENVLDILRSGLDSAVLGLGRSSVHELAPDDLVI 382 >gi|307312320|ref|ZP_07591955.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] gi|306899489|gb|EFN30120.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] Length = 150 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + A + +A PL+LK + L D ++ K+G ++ GG S + Sbjct: 9 REAGICAAGAGPLILKGI---LDPEDAKMAAKTGADAIIVSNHGGRQLDGAHSSISMLPR 65 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I ++ + GG+R+G D+LK+I LGA + PFL Sbjct: 66 I-----------------VEAVGDQIEVHLDGGIRSGQDVLKAIALGAKGTYIGRPFLYG 108 Query: 294 AMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + V A++ +RKE +M L G +R+ E Sbjct: 109 LGALGKEGVTLALDIIRKEMDTTMALCGKRRITE 142 >gi|121606044|ref|YP_983373.1| L-lactate dehydrogenase (cytochrome) [Polaromonas naphthalenivorans CJ2] gi|120595013|gb|ABM38452.1| L-lactate dehydrogenase (cytochrome) [Polaromonas naphthalenivorans CJ2] Length = 381 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 112/361 (31%), Gaps = 77/361 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F L R ++ + + + +G + P+ I+ + TG Sbjct: 33 ESTYRANEADFQTIKLRQRV--AVNMENRSTATKMVGVDVKMPVAIAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNL-- 123 I A AAEK + + + + + A + + +R +I Sbjct: 90 EI--KAARAAEKFGIPFILSTMSICSIEDIAASTQRPFWFQLYMMRDREAMAAMIGRARK 147 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFL-------------------- 151 G L +Q Q L A+ + L Sbjct: 148 AGCDALVLTLDLQVIGQRHKDLKNGLTAPPKPTLANIINLMTKPRWCLGMAGTRRHTFGN 207 Query: 152 ---HLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 H+ + ++ N + + +A + L+LK + D L + Sbjct: 208 LVGHVKGVSDMNSLSAWTNEQFDPRLSWADVAWVKEQWGGKLILKGIQ---DVEDARLAV 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +SG ++ GG +S I +E + Sbjct: 265 QSGADALVVSNHGGRQLDGAQSSITALPAI-----------------VEAVGSEIEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+ LGA + + +A V A++ + KE ++M G + Sbjct: 308 GGIRSGQDVLKAWALGARGTLIGRAMVYGLGAMGEAGVTKALQIIHKELDITMAFCGRTQ 367 Query: 324 V 324 + Sbjct: 368 I 368 >gi|116695753|ref|YP_841329.1| L-lactate cytochrome c reductase [Ralstonia eutropha H16] gi|113530252|emb|CAJ96599.1| L-Lactate cytochrome c reductase [Ralstonia eutropha H16] Length = 391 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 84/371 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 V + N++ F + L R L ++ E+D E G++ + P ++ Sbjct: 27 VEDSVSLAENRRAFTEIALRPRVLAGVATRELDF--ELFGRRYAAPFGVAPMGIAALFAY 84 Query: 64 ------------------MTGGNNKMIERINRNL----------AIAAEKTKV-----AM 90 M+G + +E + A+ + A Sbjct: 85 RGDIVLAQAAQQAAVPAIMSGSSLIRLEEVMAAAPGTWFQAYLPGDVAQIDGLLSRVEAA 144 Query: 91 AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 V + + A + T L +L + + A L Sbjct: 145 GVSTLVITVDTPVAGNRENNVRAGFSTPLRPSLRLAWQGITHP-----RWLLGTFARTLL 199 Query: 151 LHLNPLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSS 197 H P E I+ +F+D + + + L++K + L++ Sbjct: 200 RHGMPHFENAYAHRGAPILSSRVLRDFSDRAHFTWTHLEAIRRRWQGTLVVKGI---LTA 256 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D L + G+ ++ GG + + L Sbjct: 257 EDALLARRHGVDGVIVSNHGGRQLDGAIAPLRV------------------LPEIVHAVP 298 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSM 316 + + G+ G D++K++ LGA + PF A + S+ V AI+ L+ E M Sbjct: 299 DLPVMLDSGVCRGTDVIKALALGARCVFVGRPFAYAATVGSTPGVAHAIDLLQAEISRDM 358 Query: 317 FLLGTKRVQEL 327 +LG R+ ++ Sbjct: 359 AMLGLTRLADI 369 >gi|302693389|ref|XP_003036373.1| hypothetical protein SCHCODRAFT_48810 [Schizophyllum commune H4-8] gi|300110070|gb|EFJ01471.1| hypothetical protein SCHCODRAFT_48810 [Schizophyllum commune H4-8] Length = 364 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 19/203 (9%) Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 Q+ V A + D +FL E + + F +A L D PL Sbjct: 168 QVGRSDPVFMAKFGREPIVKDDIFL----GSEWLGEITSGTFKGWED-LAFLRQNWDGPL 222 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +LK + S D E L G ++ GG R ++ I +F I Sbjct: 223 ILKGIQ---SVHDAETALLHGADGIIVSNHGG---------RQVDGAIPSLFALERIMRS 270 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAI 305 + A+ + + G+R+G DI+K++ LGA L P+L + A + Sbjct: 271 DKIREAQR-SGKLTILCDSGIRSGPDIVKALALGAQAVLLGRPWLYGMIAGGQAGAEQVL 329 Query: 306 ESLRKEFIVSMFLLGTKRVQELY 328 + + +M L G + V ++ Sbjct: 330 QHTIADLDTTMALSGLRTVADIQ 352 >gi|254301161|ref|ZP_04968605.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 406e] gi|157811031|gb|EDO88201.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 406e] Length = 412 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 240 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 297 PEIAE-----------------AVGKRTEILVDGGVRRGADVIKALALGASAVSIGRAYV 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 340 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 377 >gi|302905179|ref|XP_003049215.1| hypothetical protein NECHADRAFT_82845 [Nectria haematococca mpVI 77-13-4] gi|256730150|gb|EEU43502.1| hypothetical protein NECHADRAFT_82845 [Nectria haematococca mpVI 77-13-4] Length = 444 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 22/185 (11%) Query: 154 NPLQ---EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 N LQ I + + + + +L D P++LK + + D ++ G+ Sbjct: 272 NVLQKSKAWIDVMNSGTYREWED-LKVLKKLWDGPIVLKGIQ---TVQDAHKAIEYGMDG 327 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + D ++I + + + G+R G Sbjct: 328 IIVSNHGGRQLDGAIASLDALAEIA--------------ADEKVTASNLTLLFDSGVRTG 373 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D+LK++ LGA + P++ A V ++ L + S+ G K +++L Sbjct: 374 SDVLKALALGAKAVCIGRPYVYGLAAGGQKGVEHVLKCLLADMDNSLGNCGKKSIRDLSR 433 Query: 330 NTALI 334 + I Sbjct: 434 DDLQI 438 >gi|315937069|gb|ADU56078.1| hypothetical protein CA37-55 [uncultured organism CA37] Length = 364 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 112/350 (32%), Gaps = 59/350 (16%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N+ D ++ R L DPS G + + PL ++ M + + Sbjct: 37 ETTLAANRAALDRVTIVPRVLTGGH--GPDPSATLAGTRSALPLAVAPMA---YQRLLHP 91 Query: 76 NRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKS-------FELRQYAP----------- 115 + LA+A V + + + D + + L+ + Sbjct: 92 DGELAMARAAAAGGVPFVISTLSSVSVDELSAAGGDQWFQLYWLKDDSGTIELVHRAEDA 151 Query: 116 ---------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL--NPLQEII-QPN 163 ++ + +F + +A +V H + +I N Sbjct: 152 GCRVLMVTVDVPIMGR-RLRDIRNEFVLPPDVRAANVRSGAMSSAHARADAGSALIAHTN 210 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + A + + L S +P+++K + L D + G I+ GG Sbjct: 211 GEFHPALTWAHLETLRSRTSLPIVVKGI---LDPADARRAAEIGAAGVVISNHGGRQLDG 267 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + +P + Q + G+R+G DIL+++ LGA Sbjct: 268 APASVTM------------LPAA-----VEAVPDTCQVLVDSGIRSGTDILRALALGADG 310 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLLGTKRVQELYLNTA 332 + P L + A + S+ E +M L G V + TA Sbjct: 311 VLIGRPMLWGLAAGGETGAAGVLSVLDTELRAAMRLAGCTDVAAVRRLTA 360 >gi|304314406|ref|YP_003849553.1| glutamate synthase, subunit 2 [Methanothermobacter marburgensis str. Marburg] gi|302587865|gb|ADL58240.1| predicted glutamate synthase, subunit 2 [Methanothermobacter marburgensis str. Marburg] Length = 499 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 74/392 (18%), Positives = 140/392 (35%), Gaps = 80/392 (20%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-------PSVEFLGK--- 53 RK + + G R FDD +I ++S +D V + Sbjct: 101 QRKSREGSYKVRGCGAVRRIPTFDDLVIIP---AQVSRPPIDKYREPCNTRVVLGDRFAE 157 Query: 54 ---KLSFPLLISSMTGGNNKMIERIN----RNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 +L P++I++M+ G +I LA A T + +R S I Sbjct: 158 NPLELDTPIMIAAMSFGALSKEAKIALAMGATLAGTATNTGEGGMLPEERKYASK--LIA 215 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNP-LQEIIQP 162 + ++ ++N A+++ G + H + A+ + + P + + P Sbjct: 216 QYASGRFGVSAEYLNNSEAIEIKIGQGAKSGMGGHLLAEKVTAEVSRIRMIPEGTDALSP 275 Query: 163 NGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-R 216 + + +S VP+++K G + D+++ K+G + G + Sbjct: 276 ARHMDIVGPEDLSMKISQLREITDWKVPIMVKFTS-GRVADDVKIAAKAGADIVVVDGMQ 334 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNG 270 GGT D+ GIPT ++ A +E +A+GG+R+G Sbjct: 335 GGT---------GAGPDVVTEHS--GIPTIAAIVEADEALKEVNLRDEVSLVAAGGIRSG 383 Query: 271 VDILKSIILGASLG-------------------------GLAS--PFLKPAMDSSDA--- 300 D+ K+I LGA G+A+ P L+ +D +A Sbjct: 384 ADVAKAIALGADAVYIGTAALVSIGCRVCQMCYTGTCRKGIATQDPRLRKRLDYVEAGKN 443 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 V IE++ +E + + G V +L + Sbjct: 444 VARYIEAMTEEVCMLIQQAGNTDVSKLEKDDL 475 >gi|11498413|ref|NP_069641.1| L-lactate dehydrogenase, cytochrome-type (lldD) [Archaeoglobus fulgidus DSM 4304] gi|2649803|gb|AAB90435.1| L-lactate dehydrogenase, cytochrome-type (lldD) [Archaeoglobus fulgidus DSM 4304] Length = 366 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 108/320 (33%), Gaps = 47/320 (14%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + RN++ D + L + E EFLG+K+S P++ + ++G + + Sbjct: 90 VRRNREILDSIGIKMNLLSDF---EPSLETEFLGRKISMPVMPAPLSGLVKSVDANCFKR 146 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 + A + V E + +I L + YD V+KA Sbjct: 147 IIREAWEAGV-------VPWIGHPIQDDVSEFEKEF--VWIIKPLRNTKRVYD-DVEKAE 196 Query: 139 QAVHV---LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + + + D + I+ G ++ ++A L+S +P ++K V L Sbjct: 197 SSKAMAIGMDIDSAA-GIKVGGTILSYGGTKVWS--KKELADLASTTKLPFIVKGV---L 250 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 S D ++ GG + +S PY Sbjct: 251 SERDYYSLADIS-SAIVVSNHGGRVLD----------------------SAISPLELLPY 287 Query: 256 CNEA-QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + G R G D+ K++ LGA + + V A+ +R E + Sbjct: 288 LEKVVPTGVDSGFRYGSDVFKALALGADFVLFGRLMVYALAI-ENGVQTALNMIRDELLR 346 Query: 315 SMFLLGTKRVQELYLNTALI 334 M L G K V+E+ ++ Sbjct: 347 IMKLTGAKSVKEISKEAVVL 366 >gi|264679220|ref|YP_003279127.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262209733|gb|ACY33831.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 381 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA + L+LK + D L + SG ++ GG S Sbjct: 237 WRDIAWIRQLWKGKLILKGIQ---DVEDARLAVASGADALIVSNHGGRQLDGAPSSIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GG+R+G D+LK+I LGA + L Sbjct: 294 PAIAE-----------------AVGQHIEVHMDGGVRSGQDVLKAIALGAKGVYIGRAML 336 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 V +E + KE ++M G +++ Sbjct: 337 YGLGAMGEQGVARTLEIIHKELDLTMAFCGRTDIRD 372 >gi|325958330|ref|YP_004289796.1| glutamate synthase (NADPH) [Methanobacterium sp. AL-21] gi|325329762|gb|ADZ08824.1| Glutamate synthase (NADPH) [Methanobacterium sp. AL-21] Length = 503 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 118/317 (37%), Gaps = 44/317 (13%) Query: 5 RKIDHINIVCKDPGIDRNKKFFDDWHLIHR--ALPEISF------DEVDPSVEFLGKKL- 55 RK + + + G R FDD +I + P I +V F L Sbjct: 102 RKSETGSYKVRGCGATRVIPTFDDLVVIPAQVSRPPIDKYREPCNTKVTLGARFAENPLV 161 Query: 56 -SFPLLISSMTGGNNKMIERIN----RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL 110 P++I++M+ G +I+ LA A T + +R S I + Sbjct: 162 IDTPIMIAAMSFGALSKEAKISLAMGATLAGTATNTGEGGMLPEERRYASK--LIAQYAS 219 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNP-LQEIIQPNGNT 166 ++ ++N AV++ G + H + AD + + P + + P + Sbjct: 220 GRFGVSAKYLNNSEAVEIKIGQGAKSGMGGHLLGEKVTADVSRIRMIPEGTDALSPARHM 279 Query: 167 NFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTS 220 + +S VP+++K +S D+++ K+G + G +GGT Sbjct: 280 DIVGPEDLSMKISQLREITDWKVPIIVKFTSGRVS-DDVKIAAKAGADIIVVDGMQGGT- 337 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNGVDIL 274 D+ G+PT ++ A ++ +A GG+RNG D+ Sbjct: 338 --------GAGPDVVTEHS--GVPTIAAIVEADEALKQINLRSKVNLVAGGGIRNGADVA 387 Query: 275 KSIILGASLGGLASPFL 291 K+I LGA +A+ L Sbjct: 388 KAIALGADAVYIATAAL 404 >gi|260462662|ref|ZP_05810868.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] gi|259031568|gb|EEW32838.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium opportunistum WSM2075] Length = 378 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 21/162 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L+LK + L D + K+G ++ GG S Sbjct: 235 WKDVAWIKERWGGKLILKGI---LDKEDALMAAKTGADAIIVSNHGGRQLDGASSSIMAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R+G D+LK++ LGA + PFL Sbjct: 292 EEIAD-----------------AVGDRIEVHMDGGIRSGQDVLKALCLGAKGTYIGRPFL 334 Query: 292 KPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + V A+E +RKE +++ L G + V ++ + Sbjct: 335 YGLGALGKEGVTKALEIIRKEMDITLALCGKRLVTDMGKDQL 376 >gi|260430926|ref|ZP_05784897.1| L-lactate dehydrogenase (cytochrome) [Silicibacter lacuscaerulensis ITI-1157] gi|260414754|gb|EEX08013.1| L-lactate dehydrogenase (cytochrome) [Silicibacter lacuscaerulensis ITI-1157] Length = 386 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 109/362 (30%), Gaps = 74/362 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 + + RN+ D + L E D S FLG+ P ++ M G Sbjct: 35 AETALKRNRAALDRIGFLPAILKG--PLEFDTSTRFLGRDHPLPFGMAPIGMCGLVWPGA 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF----------ELRQYAPHTVLISN 122 E + + A A V V SQ + E+R + + Sbjct: 93 EALMASAAAQAGIPYVLSTVASQSPEDMAPHIGPDAWFQLYPPKDPEIRADLLNRARSAG 152 Query: 123 LGAVQLNYDFGVQ---------------------KAHQAVHVLGADGLFLHLNP----LQ 157 G + L D V A A A G+ H P L Sbjct: 153 FGTLVLTVDVPVASRRERQTRSGLTHPPRLTPRLLAQIAARPAWAWGMARHGKPRMRTLD 212 Query: 158 EIIQPNGN-----------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + I N + L P ++K V L D E ++ Sbjct: 213 KYIDGTANLPPTAHIGYLLRTSPG-MDYVKWLRDHWQGPFIIKGV---LRPEDAERLKQA 268 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + + D+ A + I G Sbjct: 269 GVDALWVSNHGGRQFDGAPASVDMLP-------------------AIRAATDLPLIFDSG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + G+DIL++ LGA L L FL A + I+ LR++ + +M LG ++ Sbjct: 310 VSGGLDILRARALGADLIMLGRAFLYGVAALGARGPAHVIDILRQDMLANMGQLGAATLK 369 Query: 326 EL 327 +L Sbjct: 370 DL 371 >gi|124382428|ref|YP_001025460.1| FMN-dependent dehydrogenase [Burkholderia mallei NCTC 10229] gi|261826800|gb|ABM98731.2| dehydrogenase, FMN-dependent [Burkholderia mallei NCTC 10229] Length = 440 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 268 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 324 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 325 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 367 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 368 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 405 >gi|121597148|ref|YP_991059.1| FMN-dependent dehydrogenase [Burkholderia mallei SAVP1] gi|126446029|ref|YP_001077520.1| FMN-dependent dehydrogenase [Burkholderia mallei NCTC 10247] gi|238561487|ref|ZP_00441925.2| L-lactate dehydrogenase (cytochrome) [Burkholderia mallei GB8 horse 4] gi|251767872|ref|ZP_04820294.1| FMN-dependent dehydrogenase [Burkholderia mallei PRL-20] gi|254203032|ref|ZP_04909394.1| FMN-dependent dehydrogenase [Burkholderia mallei FMH] gi|254208364|ref|ZP_04914713.1| FMN-dependent dehydrogenase [Burkholderia mallei JHU] gi|121224946|gb|ABM48477.1| FMN-dependent dehydrogenase [Burkholderia mallei SAVP1] gi|126238883|gb|ABO01995.1| dehydrogenase, FMN-dependent [Burkholderia mallei NCTC 10247] gi|147746077|gb|EDK53155.1| FMN-dependent dehydrogenase [Burkholderia mallei FMH] gi|147751051|gb|EDK58119.1| FMN-dependent dehydrogenase [Burkholderia mallei JHU] gi|238524450|gb|EEP87883.1| L-lactate dehydrogenase (cytochrome) [Burkholderia mallei GB8 horse 4] gi|243061490|gb|EES43676.1| FMN-dependent dehydrogenase [Burkholderia mallei PRL-20] Length = 440 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 268 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 324 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 325 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 367 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 368 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 405 >gi|154174871|ref|YP_001407896.1| L-lactate dehydrogenase [Campylobacter curvus 525.92] gi|112803423|gb|EAU00767.1| L-lactate dehydrogenase (cytochrome) [Campylobacter curvus 525.92] Length = 390 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 103/367 (28%), Gaps = 87/367 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-----GNNK 70 N F+ + L + + LGK FP +MT G Sbjct: 36 QSTYRENHTDFEPIKFKQKIL--VDMANRSLETKLLGKTAKFP----AMTAPVGFMGMMW 89 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRV-MFSD--HNAIKSF-------ELRQYAPHTVLI 120 I ++A AA+K + + + + D ++ F R++ + Sbjct: 90 ADGEI--HMARAAQKFGIPFTLSTMSICSIEDLVEAGVEPFWFQLYVMRDREFMKDLIRR 147 Query: 121 S-------------------------------------NLGAVQLNYDFGVQKAHQAVHV 143 + NL + +G++ Sbjct: 148 AKAANCSALVVTVDLQVLGNRHRDIKNGLSTPPKFTIPNLINLSTKIPWGLRYLKN--RR 205 Query: 144 LGADGLFLHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + H + ++ + + S I + + ++LK + + D Sbjct: 206 WTFRNIAGHAKNVSDLSSLSSWTKEQFDPSLQWSDIEEIKNLWGDKIILKGI---MLPED 262 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +L +K G ++ GG S DI ++ Sbjct: 263 AQLAVKHGADAIIVSNHGGRQMDGTLSAIKALPDI-----------------VSAVGDKT 305 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + G +G D+LK+ +GA L P D V A++ + E +M Sbjct: 306 EVWIDSGFYSGQDMLKAWAMGARGIMLGRAPVYGLGAYGEDGVTRALQIMYDEMDTTMAF 365 Query: 319 LGTKRVQ 325 G + +Q Sbjct: 366 AGHRDIQ 372 >gi|259416590|ref|ZP_05740510.1| L-lactate dehydrogenase [Silicibacter sp. TrichCH4B] gi|259348029|gb|EEW59806.1| L-lactate dehydrogenase [Silicibacter sp. TrichCH4B] Length = 386 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 84/376 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRAL--PEISFDEVDPSVEFLGKKLSFPLLISS--MTG---- 66 ++ RN++ D L+ L P+ EVD S G +L P I+ M+G Sbjct: 35 REATQARNRRCLDRIGLMPAILGGPQ----EVDLSTTLFGTRLPRPFGIAPVGMSGLIWP 90 Query: 67 ---GN---NKMIERINRNLAIAAEK--TKVAMAVGSQRVMFSDH-------------NAI 105 G+ + +I L+ A + +A +G Q Sbjct: 91 DAEGHLARHAAAAQIPYGLSTVASQSPEDLAPHLGEQGWFQMYPPKDEGIRKDMLARARA 150 Query: 106 KSFELRQYAPHTVLISN------LGAVQLNYDFGVQKAHQAVHVLGADGLFL-------- 151 F++ + S G Q A A+ A G+ Sbjct: 151 AGFKVLVLTVDVPVASRRERQVRSGLTQPPRLTPRLLAQVAMRPTWALGMARQHRGDGGM 210 Query: 152 -HLNPLQEIIQPNGN------------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 H+ L + I+ + D + L + PL++K V L + Sbjct: 211 PHMRTLDKYIEGAASALSSTAHIGYLLRTAPDWDY-LQWLRDHWEGPLVVKGV---LDAR 266 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D +G+ I+ G + P P+ + Sbjct: 267 DAPRLEAAGVDAIWISNHAGRQFDAA-------------------PAPIEVLEEMRAATR 307 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMF 317 I G+ G+DI++++ LGA L + A A + + L K+ +M Sbjct: 308 LPLILDSGIEGGLDIVRAMALGADFVMLGRAWHYALAALGAAGPAHLHDILSKDLSANMG 367 Query: 318 LLGTKRVQELYLNTAL 333 LG + EL L Sbjct: 368 QLGISTLAELRDLKRL 383 >gi|217422159|ref|ZP_03453662.1| dehydrogenase, FMN-dependent [Burkholderia pseudomallei 576] gi|217394390|gb|EEC34409.1| dehydrogenase, FMN-dependent [Burkholderia pseudomallei 576] Length = 440 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 268 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 324 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 325 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 367 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 368 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 405 >gi|227893672|ref|ZP_04011477.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus ultunensis DSM 16047] gi|227864532|gb|EEJ71953.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus ultunensis DSM 16047] Length = 342 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 104/317 (32%), Gaps = 42/317 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D + R I + D + E G+K + PL +++++ N + Sbjct: 48 ADDANVHNRAYLDSILVEMRL---IDSVKPDLTTEIFGRKYASPLTLAAVSHLNKVLDDK 104 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNY 130 + + A AA+ V +G + + +R P +G +QL Sbjct: 105 TRKPMQEKARAAKNMNVLNWIGMESNEEYTEIVKEGGDTVRIVKPFADHDKIIGELQLAE 164 Query: 131 DFGVQKAHQAVH-VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 G + V G+DG +G + + +++VP + K Sbjct: 165 KLGAVAVGMDIDHVAGSDG---------NYDVVDGIPLGPITFNDLEKYVHSVNVPFVAK 215 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V LS D +G + ++ G + +G+P L Sbjct: 216 GV---LSVRDAVKARDAGAQAIVVSHHHGR----VP---------------FGVPPLKVL 253 Query: 250 EMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 + + A G L G D K++ LGA + L + D A I+ Sbjct: 254 PEIKKALRGSGMTIFADGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDKIK 313 Query: 307 SLRKEFIVSMFLLGTKR 323 L ++ M G K Sbjct: 314 KLNQQLSQMMLYTGIKD 330 >gi|332530927|ref|ZP_08406851.1| L-lactate dehydrogenase (cytochrome) [Hylemonella gracilis ATCC 19624] gi|332039615|gb|EGI76017.1| L-lactate dehydrogenase (cytochrome) [Hylemonella gracilis ATCC 19624] Length = 384 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 116/362 (32%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F R ++ + +V+ +G P+ I+ + TG Sbjct: 33 ESTYRANEADFQSIKFRQRV--AVNMEGRSTAVKMIGIDAKMPVAIAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL-----RQYAPHTVLISN- 122 I+ A AAEK + + + + + +A F+L R+ + + Sbjct: 90 EIHA--ARAAEKFGIPFTLSTMSICSIEDIAEHTSAPFWFQLYMMRDREAMKRMIQRAKD 147 Query: 123 --------------LGAVQLNYDFGV------------QKAHQAVHVLGADG-------- 148 +G + G+ A + LG G Sbjct: 148 AKCSALVLTLDLQVIGQRHKDLKNGLTAPPRPTLKNILNLATKPRWCLGMAGTRRHTFRN 207 Query: 149 LFLHLNPLQEI----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 L H+ + ++ + N + + +A + L+LK + + + D L + Sbjct: 208 LVGHVQAVSDMKSLAVWTNEQFDPRLSWADVAWVKEQWGGKLILKGI---MDAEDARLAV 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 SG ++ GG S I ++ + Sbjct: 265 ASGADAIVVSNHGGRQLDGAPSSIAALPAI-----------------VSEVGSKIEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+L++ LGA + + +A V A++ L KE +M G + Sbjct: 308 GGIRSGQDVLRAWALGAKGTMIGRAMVYGLGAMGEAGVTKALQMLHKELDTTMAFCGHRH 367 Query: 324 VQ 325 +Q Sbjct: 368 LQ 369 >gi|25029318|ref|NP_739372.1| putative L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|259505679|ref|ZP_05748581.1| L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|23494606|dbj|BAC19572.1| putative L-lactate dehydrogenase [Corynebacterium efficiens YS-314] gi|259166761|gb|EEW51315.1| L-lactate dehydrogenase [Corynebacterium efficiens YS-314] Length = 417 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 105/368 (28%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + I R ++ F++ L P + VDPS + LG + P I+ Sbjct: 59 AEAELSIKRAREAFENIEFHPDILKP---AENVDPSTQILGGHSALPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEIAGAGAAGAAGIPFTLSTLGTTSIEDVKATNPQGRNWFQLYVMRDREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + V + + + F + +++ + DF Sbjct: 176 AAAGFDTLMFTVDTPIAGYRIRDTRNGFSIPPQLTPGTVLNAIPRPWWWIDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + +++ + + + ++ LL+K V + D Sbjct: 230 TPTLEFASLSSTGGTVGDLLNSAMDPTIS--YEDLKVIREMWPGKLLVKGVQ---NVPDA 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L+ G+ ++ GG R L + R +E Sbjct: 285 VKLLEGGVDGLILSNHGGRQLDRAPVPFHLLPQV-----------------RREVGSEPT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG DI+ +I LGA + +L M V IE LR E +M LL Sbjct: 328 IMIDTGIMNGADIVAAIALGADFTLIGRAYLYGLMAGGRQGVDRTIEILRTEITRTMALL 387 Query: 320 GTKRVQEL 327 G + EL Sbjct: 388 GVSTLDEL 395 >gi|269956491|ref|YP_003326280.1| Lactate 2-monooxygenase [Xylanimonas cellulosilytica DSM 15894] gi|269305172|gb|ACZ30722.1| Lactate 2-monooxygenase [Xylanimonas cellulosilytica DSM 15894] Length = 434 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L +P+++K V D L G ++ GG + D Sbjct: 284 WADLRHLRETTTLPIVVKGVQH---PDDARRALDHGADGIVVSNHGGRQIDNAVASLDAL 340 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + A + G+R G D+ ++ LGA L P++ Sbjct: 341 PAVAA-----------------AVDGRAPVLFDSGIRTGADVFVALALGADAVLLGRPWV 383 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V A +E++ E ++M L G + V E+ Sbjct: 384 YGLTLAGQAGVRAVVENVLAELDLTMALAGVRSVAEI 420 >gi|134278689|ref|ZP_01765403.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 305] gi|167724651|ref|ZP_02407887.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei DM98] gi|167899222|ref|ZP_02486623.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 7894] gi|167923739|ref|ZP_02510830.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei BCC215] gi|134250473|gb|EBA50553.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 305] Length = 412 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 240 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 297 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 340 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 377 >gi|163854318|ref|YP_001628616.1| L-lactate dehydrogenase [Bordetella petrii DSM 12804] gi|163258046|emb|CAP40345.1| L-lactate dehydrogenase [Bordetella petrii] Length = 388 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 109/364 (29%), Gaps = 77/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNK 70 + N+ F L R + + G P+ I+ TG + Sbjct: 35 AWTEGTYRANETDFQAIKLRQRV--AVDMEGRSLRTTMAGADAVMPVAIAPTGLTGMQHA 92 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLI 120 E + A AA + V + + + + A + F+L R++ + + Sbjct: 93 DGEMVA---AQAAAEFGVPFTLSTMSICSIEDVARATGKPFWFQLYVMRDREFVANLIDR 149 Query: 121 SNL-GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNP------------- 155 + G L +Q Q + A+ + L P Sbjct: 150 AKAAGCSALVLTLDLQILGQRHKDIRNGLSAPPKPTLANLINLATKPRWCLGMLGTPRRT 209 Query: 156 -LQEIIQPNGNTNFADLSSKIA-------------LLSSAMDVPLLLKEVGCGLSSMDIE 201 + G T+ + LSS A + L+LK + L D Sbjct: 210 FGNIVGHAKGVTDLSSLSSWTAEQFDPRLSWADVEWIKQRWGGKLILKGI---LDVEDAR 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L SG ++ GG S I + + Sbjct: 267 LAADSGADALIVSNHGGRQLDGAMSSIAALPAIAD-----------------AVGSRIEV 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G D+LK++ LGA + FL V A+E L KE V+M L G Sbjct: 310 WMDGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAYGKAGVTRALEILYKEMDVTMALCG 369 Query: 321 TKRV 324 K + Sbjct: 370 RKSL 373 >gi|257055383|ref|YP_003133215.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256585255|gb|ACU96388.1| alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 388 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 57/352 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N++ FD W ++ R L E D S LG+ L P+L + + G + + R A Sbjct: 59 ANREAFDRWRIVPRML--TDSTERDLSTTVLGETLPAPVLFAPV-GVQSIVHSEAERASA 115 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKS------FELRQYAPHTVLISNLGAVQLNYDFGV 134 AA + + + + A S F+L + ++ A F V Sbjct: 116 RAAAGLGLPFVMSTASSTSIEDVAEASGKGPRWFQLYWPN-DPEVCGSILARARAAGFSV 174 Query: 135 ---------------QKAHQAVHVLGADGLFLHLNPL---QEIIQP----NGNTNFADLS 172 + + L A+G + + + P +S Sbjct: 175 LVVTLDTWSLGWRPCDLDNGYLPFLKAEGTAVPFSDPVFCSRLDAPPEENEAMAVLRWIS 234 Query: 173 SKIALLSSAMDVPLLLKE------VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +P L + + D ++G+ ++ GG + Sbjct: 235 MITGTDRDWSALPFLREHWDGPIVLKGIQHVDDARRAAEAGVDGIVVSNHGGRQVDGAAA 294 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D+ I + + + G+R G D++K++ LGA + Sbjct: 295 SLDMLPQIAA-----------------AVGDRLEVLFDSGVRTGSDVVKALALGAKAVLV 337 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P++ A+ V + SL + +++ L G + V L AL+R Q Sbjct: 338 GRPYVYGLALGGEQGVRHVMRSLLADLDLTLGLSGHRGVSAL-GPEALVRGQ 388 >gi|53716677|ref|YP_105096.1| FMN-dependent dehydrogenase [Burkholderia mallei ATCC 23344] gi|53722819|ref|YP_111804.1| dehydrogenase [Burkholderia pseudomallei K96243] gi|76817919|ref|YP_336040.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1710b] gi|126455676|ref|YP_001076475.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106a] gi|167743605|ref|ZP_02416379.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 14] gi|167820790|ref|ZP_02452470.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 91] gi|167829150|ref|ZP_02460621.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 9] gi|167850623|ref|ZP_02476131.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei B7210] gi|167907558|ref|ZP_02494763.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei NCTC 13177] gi|167915900|ref|ZP_02502991.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 112] gi|226195780|ref|ZP_03791367.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|237508950|ref|ZP_04521665.1| L-lactate dehydrogenase (cytochrome) [Burkholderia pseudomallei MSHR346] gi|242314013|ref|ZP_04813030.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106b] gi|254177348|ref|ZP_04884004.1| FMN-dependent dehydrogenase [Burkholderia mallei ATCC 10399] gi|254186105|ref|ZP_04892623.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254194188|ref|ZP_04900620.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei S13] gi|254265386|ref|ZP_04956251.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1710a] gi|52213233|emb|CAH39276.1| putative dehydrogenase [Burkholderia pseudomallei K96243] gi|52422647|gb|AAU46217.1| FMN-dependent dehydrogenase [Burkholderia mallei ATCC 23344] gi|76582392|gb|ABA51866.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1710b] gi|126229444|gb|ABN92857.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106a] gi|157933791|gb|EDO89461.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|160698388|gb|EDP88358.1| FMN-dependent dehydrogenase [Burkholderia mallei ATCC 10399] gi|169650939|gb|EDS83632.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei S13] gi|225932265|gb|EEH28265.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|235001155|gb|EEP50579.1| L-lactate dehydrogenase (cytochrome) [Burkholderia pseudomallei MSHR346] gi|242137252|gb|EES23655.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1106b] gi|254216388|gb|EET05773.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1710a] Length = 412 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 240 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 297 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 340 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 377 >gi|85708508|ref|ZP_01039574.1| hypothetical protein NAP1_04695 [Erythrobacter sp. NAP1] gi|85690042|gb|EAQ30045.1| hypothetical protein NAP1_04695 [Erythrobacter sp. NAP1] Length = 385 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 21/171 (12%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N + + S A + +LK V +S+ D ++ G I+ GG Sbjct: 229 NTMLDTSMDWSTAAAIREQWGGTFVLKGV---MSAGDARRAVEIGADAIMISNHGGRQLD 285 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + D +I E + I GG+R G +LK++ GA+ Sbjct: 286 GSRAPFDQLPEI-----------------VDAVGGEIEIICDGGVRRGTHVLKTMCSGAT 328 Query: 283 LGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +L A + V+ A++ L+ E M L+G V +L Sbjct: 329 AASGGRLYLYALAAAGEEGVMRALDILKDEIERGMRLMGVTSVDQLTQERL 379 >gi|238027837|ref|YP_002912068.1| MdlB [Burkholderia glumae BGR1] gi|237877031|gb|ACR29364.1| MdlB [Burkholderia glumae BGR1] Length = 390 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 122/369 (33%), Gaps = 73/369 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ RN+ F+ + R L ++ E S LG +L+ P +I+ TG N + Sbjct: 30 AEDERGLRRNRAAFERLAFVPRRLADVGTRE--LSTTLLGTRLAAPFVIAP-TGLNGLIH 86 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL----RQYAPHTVLIS-N 122 + LA AA + + A+ + + + A + F+L R+ A V + Sbjct: 87 PDGDLALARAARRAGIPFAMSTASNVSLERLAGEAGGELWFQLYVMHRELADSLVQRAAR 146 Query: 123 LGAVQLNYDFGVQ-KAHQAVHVLGADGLFLHLNP---LQEIIQPN--------------- 163 G L V + + L L P L ++ P Sbjct: 147 AGYRTLVVTVDVPLNGKRERDLRNGFALPLRCTPGVLLDGLLHPRWWYALLRGGGLPTLA 206 Query: 164 ------------------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + L LL+K + L + D L+ Sbjct: 207 NLGADGNAGIEAKTALLRRQMDASFGWDDLRRLRERWPHRLLVKGI---LHTGDAVACLE 263 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIAS 264 +G ++ G + D+ L AR C + Sbjct: 264 AGADGLILSNHGARQLDDAVAPLDV------------------LSAARQACGARGALLVD 305 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R G D++K++ LGA+ L L A V +E LR E ++ +LG + Sbjct: 306 SGVRRGSDVVKALALGANAVMLGRATLYGLAAAGEAGVTRVLEILRDEVDRTLAMLGCRG 365 Query: 324 VQELYLNTA 332 + EL + Sbjct: 366 LAELSASHL 374 >gi|293380342|ref|ZP_06626413.1| dehydrogenase, FMN-dependent [Lactobacillus crispatus 214-1] gi|290923025|gb|EFD99956.1| dehydrogenase, FMN-dependent [Lactobacillus crispatus 214-1] Length = 333 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 104/319 (32%), Gaps = 46/319 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R L E D + E GKK + PL +++++ N Sbjct: 39 ADDANVHNRAYLDNILVEMRLL---DSVEPDLTTEIFGKKYASPLTLAAVSHLNKVLPDK 95 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + A AA+ T + M + + +R P+ +G ++ Sbjct: 96 TRKPMQEKARAAKNTNTLNWIGMESNEEYAEIVKESGD---TVRIMKPYADHDKIMGELK 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + G + + D N +++ +G S + A+ +P + Sbjct: 153 QAEELGAVAVGMDIDHVPGD------NGKYDVV--DGIPLGPISFSDLEKYVHAVKLPFV 204 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 K V LS D +G + ++ G + +G+P Sbjct: 205 AKGV---LSVRDAVKARDAGAKAIVVSHHHGR----VP---------------FGVPPLK 242 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAA 304 L + N G L G D K++ LGA + L + D A Sbjct: 243 VLPAIKQALNGSGMTIFVDGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDK 302 Query: 305 IESLRKEFIVSMFLLGTKR 323 I+ + ++ M G + Sbjct: 303 IKKMNEQLAQMMLYTGVRD 321 >gi|296139985|ref|YP_003647228.1| lactate 2-monooxygenase [Tsukamurella paurometabola DSM 20162] gi|296028119|gb|ADG78889.1| Lactate 2-monooxygenase [Tsukamurella paurometabola DSM 20162] Length = 379 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 120/356 (33%), Gaps = 62/356 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N + + R L + S D S FLG +L P+L+ + G N + Sbjct: 50 AGDEHTQDINVTELRRYGFVPRMLRDRSVR--DLSTTFLGHELEAPVLLCPV-GVNGMVH 106 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI---KSFELRQYAP-----------HTV 118 E + +A AA + VA + +H A SF Q P Sbjct: 107 EDGDLEVARAAARLGVAAMYSTLSEAPLEHVAEARGDSFAAFQLYPTKDDVLTDSLVRRA 166 Query: 119 LISNLGAVQLNYDFG------VQKAHQAVHVLGADGLFLHL------------NP---LQ 157 + A+ + D G A+ + L GL +L NP Sbjct: 167 AAAGFDALTITLDTGSLGWRPRDLANGYIPFLRGRGLANYLSDPRFLELCGVDNPPPLHA 226 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 I+ + + IA + ++P++LK + + D G+ + G Sbjct: 227 GIVWSSLFSKPTFSWDDIARIRRLTELPIILKGICH---TEDARRAAAEGVDAIACSNHG 283 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + G+P LE G+R+GVDIL+ + Sbjct: 284 GRQ------------------ANGGLPAIDHLEGVLDA--GLPVTFDSGIRDGVDILRVV 323 Query: 278 ILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 LGA+L G+ P++ A V + S+ E ++M + +L++ Sbjct: 324 GLGATLAGIGRPYVYGLTIGGAAGVEHVVRSMLAEADLTMAADCLTTLADLHIVKR 379 >gi|257467298|ref|ZP_05631609.1| glycolate oxidase [Fusobacterium gonidiaformans ATCC 25563] gi|315918428|ref|ZP_07914668.1| glycolate oxidase [Fusobacterium gonidiaformans ATCC 25563] gi|313692303|gb|EFS29138.1| glycolate oxidase [Fusobacterium gonidiaformans ATCC 25563] Length = 315 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 105/313 (33%), Gaps = 47/313 (15%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 N+++ D H+ R L I E S E G+ P++ M ++ +++ Sbjct: 29 YNRRYLDTIHIEMRVLDSI---EPSLSTEIFGETFDSPIM---MPAFSHLNKVGVDKKKP 82 Query: 80 ----AIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A AA++ V M + + A ++ + H++++ + + + Sbjct: 83 MLHYAFAAKELNMLNWVGMEPNDEFEEILEAGARTVRIIKPFMDHSIILEQIAFAEKHNA 142 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 V V + PL + + ++ +P + K V Sbjct: 143 IAVGIDIDHVPGSNGKYDVVDGIPL-----------GPVTTEDLKSYVNSTSLPFVAKGV 191 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 LS D ++ ++ I+ G I + + I + GI Sbjct: 192 ---LSVQDALKAKEARVKAIVISHHHGRIPFGI-APLQVLPRIKEALKGSGI-------- 239 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRK 310 G + +G D+ K++ LGA + L P + + + V+ ++ +R+ Sbjct: 240 --------FIFVDGSMESGYDVYKALALGADAVSVGRAILAPLLKEGKEGVIKKVKKMRE 291 Query: 311 EFIVSMFLLGTKR 323 E M G + Sbjct: 292 ELSELMMYTGIED 304 >gi|254439093|ref|ZP_05052587.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] gi|198254539|gb|EDY78853.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] Length = 387 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++A L P++LK + L D + G ++ GG S + Sbjct: 235 WDRVAQLMKMWGGPVILKGI---LDVEDAKKAADLGADAIIVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + G+R+G D+LK+I LGA + F+ Sbjct: 292 EQI-----------------VDAVGDRVEVHFDSGIRSGQDVLKAIALGAKGTYIGRAFV 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A V A++ + E ++M L G + ++ + + L+ Sbjct: 335 NGLGAMGEAGVTKALDVIHTELDLTMALCGHRDIKGVNKDILLV 378 >gi|126444156|ref|YP_001063573.1| L-lactate dehydrogenase [Burkholderia pseudomallei 668] gi|126223647|gb|ABN87152.1| L-lactate dehydrogenase [Burkholderia pseudomallei 668] Length = 412 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 240 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 296 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 297 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 339 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + + EL Sbjct: 340 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESIAELR 377 >gi|187478376|ref|YP_786400.1| L-lactate dehydrogenase [Bordetella avium 197N] gi|115422962|emb|CAJ49492.1| putative L-lactate dehydrogenase [Bordetella avium 197N] Length = 392 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 115/384 (29%), Gaps = 98/384 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ F + + R L + D SVE G + + P I+ M G Sbjct: 38 AENNQSRDDNRAVFHELGFVPRVL--RNVAARDQSVELFGTRYATPFGIAPM-GITALST 94 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 R + LA AA + +A A+ S + + Q AP T Q Sbjct: 95 YRGDIVLAQAAREAGIA-AIMSATSLIRLEE------VAQAAPDTWF-------QAYLPG 140 Query: 133 GVQKAHQAVHVLGADG---LFLHLN-PLQEIIQPNGNTNFADLSSKIALLS--------- 179 V++ V + A G L L ++ P+ + N T F+ L+ Sbjct: 141 DVERIDALVDRVAAAGYRQLVLTVDIPVSANRENNVRTGFSTPLKPSLRLAWDGMTRPRW 200 Query: 180 ---------------------SAMDVPLLLKEVGCGLSSMD------------------- 199 + P++ V S+ D Sbjct: 201 TAGVFLRTLVRHGMPHFENSFATRGAPIMSASVLRDFSARDHLNWEHVARIRARWKGELI 260 Query: 200 ---------IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + + G ++ GG S + L Sbjct: 261 IKGIMHPADASMAREYGADGIIVSNHGGRQLDGAVSPMRV------------------LP 302 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLR 309 + + G+R G D+LK++ LGA + PF A+ V AIE LR Sbjct: 303 EVARAAGKMVVMMDSGIRRGSDVLKALALGAHFVFVGRPFNYAAAVGGQAGVAHAIELLR 362 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 E +M +LG ++ + L Sbjct: 363 AEVDRNMAMLGILSPADMNASLLL 386 >gi|330814555|ref|YP_004362730.1| putative L-lactate dehydrogenase [Burkholderia gladioli BSR3] gi|327374547|gb|AEA65898.1| putative L-lactate dehydrogenase [Burkholderia gladioli BSR3] Length = 380 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 102/361 (28%), Gaps = 73/361 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N+ F L R ++ + +G ++ P+ ++ TG M Sbjct: 34 ESTYQANEADFQAIKLRQRV--GVNIESRTLRTTMVGHGVTMPVALAP-TGLTGMMRADG 90 Query: 76 NRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFELRQYAPHTVL------ISNLG 124 A AA++ V + + + + + F+L + ++ G Sbjct: 91 EILAARAAQRFGVPFTLSTMSICSIEDVAENAPGPFWFQLYMMRDRAFIERLIARAASAG 150 Query: 125 AVQLNYDFGVQ--------------------------------KAHQAVHVLGADG--LF 150 L +Q Q + Sbjct: 151 CSALVLTMDLQIGGQRHKDIKNGLSTPPRITLPNLLNMVSKPSWCMQMARTRRLHFGNIV 210 Query: 151 LHLNPLQEII----QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 H++ + ++ N + + + + L++K + L +D + Sbjct: 211 GHVDGVTDMSSLDSWTNDQFDPTLGWADVEWVRKRWKGKLIVKGI---LDPIDALHAADA 267 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S + N + GG Sbjct: 268 GADVVVVSNHGGRQLDGALSSIRALPAV-----------------VDAAGNHVEVWLDGG 310 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+LK++ LGA + FL + V +++ + KE +M L G + Sbjct: 311 IRTGQDVLKAVALGARGTMIGRAFLYGLSAMGQEGVEKSLDIIAKELDTTMALCGYTDIN 370 Query: 326 E 326 Sbjct: 371 A 371 >gi|84683375|ref|ZP_01011278.1| L-lactate dehydrogenase, putative [Maritimibacter alkaliphilus HTCC2654] gi|84668118|gb|EAQ14585.1| L-lactate dehydrogenase, putative [Rhodobacterales bacterium HTCC2654] Length = 387 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 21/174 (12%) Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 +P + + N + + SKI + PL+LK V + + D + K G + Sbjct: 217 DPSKLMSWTNDQFDPSLDWSKIEKIKEMWGGPLILKGV---MEAEDAVMAAKVGADAIIV 273 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG S I + + + G+R+G D+ Sbjct: 274 SNHGGRQLDGALSSIRALDPI-----------------LQAVGDRIEVHLDSGIRSGQDV 316 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 LK++ +GA + F+ +A V A+E + KE SM G + + + Sbjct: 317 LKAMAMGAKGTYIGRAFVYGLGAMGEAGVTRALEVIHKELDTSMAFCGHRDINQ 370 >gi|126738291|ref|ZP_01754012.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. SK209-2-6] gi|126720788|gb|EBA17493.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. SK209-2-6] Length = 345 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 97/348 (27%), Gaps = 66/348 (18%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN + L R L E + + G K S P I+ M G N + LA Sbjct: 18 RNSAALEAITLRPRIL--RDVGERSLATQVFGTKASRPFGIAPM-GMCNLAAPGADLMLA 74 Query: 81 IAAEKTKVAMAVG-----SQRVMFSDHNAIKSFELRQYAPHTVLISNL-------GAVQL 128 A + +V + V S + F+L ++ L G L Sbjct: 75 RLAARYRVPLGVSTVASTSLEKILEVSEGHAWFQL-YFSGDGAGTFKLAERALEAGYETL 133 Query: 129 NYDFGVQKAHQAVHVL-------------GADGLFLH----------LNPLQEIIQPNG- 164 V + + L L LH P+ + G Sbjct: 134 VLTVDVPEVGRRPRELRHGFKMPFRIGPSQLFDLALHPRWSLNTLLRGKPVLANFELEGY 193 Query: 165 -----NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + L L++K V L D + +G+ ++ G Sbjct: 194 DFDRTESRARATWDTLDRLRDLWPGNLVVKGV---LDVEDAQALAAAGVDAIQVSSHGSR 250 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 ++ + I G+R+G D+LK+I + Sbjct: 251 QLESTPPPIEMLAKIRAEL-----------------GPNFPLFYDSGIRSGEDVLKAIAI 293 Query: 280 GASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 GA L A + E++ E ++M G ++ + Sbjct: 294 GADFIFLGKILQFAIAAAGEAGLERLWEAISAELSIAMAQTGQSKLTD 341 >gi|254477644|ref|ZP_05091030.1| FMN-dependent dehydrogenase [Ruegeria sp. R11] gi|214031887|gb|EEB72722.1| FMN-dependent dehydrogenase [Ruegeria sp. R11] Length = 401 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 102/365 (27%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + RN+ D + L + D S FLG P I+ M+G E Sbjct: 39 EATKARNRMALDQVGFLPSILHG--PQKPDLSRRFLGVDRPLPFGIAPVGMSGLVWPDAE 96 Query: 74 RINRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKS--FELRQYAPHTVLISNL----- 123 +LA AA + V SQ + S F+L + L Sbjct: 97 ---GHLARAAAAHGLPYCLSTVASQSPEDVAPHLGASPWFQLYPPKDPGIRRDMLARAKK 153 Query: 124 ------------------------GAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNP 155 G Q A A+ A G+ H+ Sbjct: 154 AGFTGLVLTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVAMRPAWAMGMAQRGMPHMRT 213 Query: 156 LQEIIQPNGN------------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + D + L L++K V + + D Sbjct: 214 LDKYVTGQLDSLSSTAHVGYLLRTSPDWDY-VRWLRDHWQGSLIIKGV---MRAEDAAPL 269 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 G+ I+ G + + ++ D+ I Sbjct: 270 ETIGVDALWISNHAGRQFDAAPAAIEVLPDL-------------------RAATRLPLIF 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+ G+DIL+++ LGA L F A V I+ LRK+ +M LG Sbjct: 311 DSGIEGGLDILRALALGADFVMLGRAFHFALAALGPKGVDHLIDILRKDMSANMGQLGAA 370 Query: 323 RVQEL 327 + L Sbjct: 371 TLDAL 375 >gi|264679808|ref|YP_003279717.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] gi|262210323|gb|ACY34421.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni CNB-2] Length = 413 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 22/163 (13%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I + L++K + L+ D + G + ++ GG + Sbjct: 262 RDHLNW-KNIERIRQRWKGNLIIKGI---LNEDDAVMATDIGAQGIVVSNHGGRQLDGVV 317 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + + + + G+R G D+LK++ LGA + Sbjct: 318 APLQMLP-----------------YVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVF 360 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PF+ A+ + V AI LR E +M +LG + E+ Sbjct: 361 LGRPFMYAAAVGGAQGVHHAITLLRDEVDRNMAMLGATSMAEI 403 >gi|86137697|ref|ZP_01056273.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. MED193] gi|85825289|gb|EAQ45488.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. MED193] Length = 400 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 109/384 (28%), Gaps = 89/384 (23%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 + RN+ D + L +VD S FLG+ L P I+ M+G Sbjct: 44 NEATKRRNRSALDQIGFLPSILHG--PQQVDLSTSFLGRDLPLPFGIAPLGMSGLIWPDA 101 Query: 73 ERINRNLAIAAEKTKVAMA---VGSQRVMFSDHN--AIKSFE--------LRQYAPHTVL 119 E LA ++ + + V SQ + A F+ +R+ Sbjct: 102 E---GRLARFGARSGIPYSLSTVASQSPEDLAPHLGAEAWFQLYPPKDEDIRRDMLERAR 158 Query: 120 ISNLGAVQLNYDFGVQ---------------------KAHQAVHVLGADGLFL------- 151 + + L D V A A A G+ Sbjct: 159 KAGFKTLVLTVDVPVASRRERQVRSGLTQPPRLTPRLLAQVAQRPAWASGMARQHWAHGG 218 Query: 152 --HLNPLQEIIQPNGN------------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 H+ L + I N D L ++K V + + Sbjct: 219 MPHMRTLDKYITENSKGLSSTAHIGYLLRTSPDWDYA-KWLRDNWQGSFVIKGV---MRA 274 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + G+ ++ G + + ++ ++ Sbjct: 275 EDAAPLEQIGVDALWVSNHAGRQFDAAPASTEVLPEL-------------------RAAT 315 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSM 316 + G+ G+DIL+++ LGA L F A +E L K+ +M Sbjct: 316 SLPLVFDSGIEGGLDILRALALGADFIMLGRAFHFALAALGDRGPNHLVEILSKDLEANM 375 Query: 317 FLLGTKRVQE---LYLNTALIRHQ 337 LG + + E L + + Q Sbjct: 376 GQLGLRSLSEVRTLQIRNLTLHSQ 399 >gi|152995855|ref|YP_001340690.1| L-lactate dehydrogenase [Marinomonas sp. MWYL1] gi|150836779|gb|ABR70755.1| L-lactate dehydrogenase (cytochrome) [Marinomonas sp. MWYL1] Length = 390 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 79/369 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N+ F L L ++ + + +G + P++I TG N + Sbjct: 39 AENEQTLSCNESDFAKIRLTSHTL--VANYPPELTRSLVGSASALPMMIGP-TGFNGMLW 95 Query: 73 ERINRNLAIAAEKTKVAMAVGS--------------------QRVMFSDHNAIKSFELRQ 112 + + LA AA K+ + + Q + R Sbjct: 96 PQADVALAKAANVKKIPFCLSTVSNASMEQVREAAQELDFWFQLYGLKNAQLNDDLLARA 155 Query: 113 YA---------PHTVLISN--LGAVQLNYDFGVQKAHQAVHVLGADGLFL---------- 151 A ++ N + ++A +L + + Sbjct: 156 KAVGVSTLVITSDAFVVGNREWDRRNFARPRQLTWHNKANVMLHPNWVCRVMFPYGLPTM 215 Query: 152 -HLNP-----------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 +LNP + IQ +T F +A + L+LK V L D Sbjct: 216 GNLNPYLPTYEQSALGAMKFIQEQLDTLFNW--ESVARIRDQWHGKLILKGV---LHPDD 270 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + +K G ++ GG S D I + + Sbjct: 271 AKQAVKLGFDGIVVSNHGGRQLDGALSSIDALPAI-----------------VKAVGGDI 313 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFL 318 + G+R G D++K+ LG L L V ++ L++E S+ L Sbjct: 314 DILLDSGIRRGSDVVKAAALGVQGVMLGRATLFGVAAGGQIGVSRVLDILQEELSRSLNL 373 Query: 319 LGTKRVQEL 327 +G +R+ EL Sbjct: 374 MGVQRLDEL 382 >gi|146324293|ref|XP_747805.2| FMN dependent dehydrogenase [Aspergillus fumigatus Af293] gi|129556264|gb|EAL85767.2| FMN dependent dehydrogenase, putative [Aspergillus fumigatus Af293] gi|159122586|gb|EDP47707.1| FMN dependent dehydrogenase, putative [Aspergillus fumigatus A1163] Length = 403 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 21/159 (13%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +IA L + P++LK + D L LK+G ++ GG Sbjct: 246 PHTWEQIAFLRKNWNGPIVLKGIQHA---EDARLALKAGCDGIIVSNHGGRQVDGAIGSL 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ +I ++ + G+R G DI+K++ LGA ++ Sbjct: 303 DVLPEI-----------------VDAVGDKMTVLFDSGIRTGADIIKALCLGAKAVLVSR 345 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 P + A+D ++ + E S+ L G + E Sbjct: 346 PIIYGLAVDGKQGAKQVMKGILAELWQSLSLAGICGIAE 384 >gi|256844395|ref|ZP_05549881.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] gi|256613473|gb|EEU18676.1| glycolate oxidase [Lactobacillus crispatus 125-2-CHN] Length = 303 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 104/319 (32%), Gaps = 46/319 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R L E D + E GKK + PL +++++ N Sbjct: 9 ADDANVHNRAYLDNILVEMRLL---DSVEPDLTTEIFGKKYASPLTLAAVSHLNKVLPDK 65 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + A AA+ T + M + + +R P+ +G ++ Sbjct: 66 TRKPMQEKARAAKNTNTLNWIGMESNEEYAEIVKESGD---TVRIMKPYADHDKIMGELK 122 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + G + + D N +++ +G S + A+ +P + Sbjct: 123 QAEELGAVAVGMDIDHVPGD------NGKYDVV--DGIPLGPISFSDLEKYVHAVKLPFV 174 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 K V LS D +G + ++ G + +G+P Sbjct: 175 AKGV---LSVRDAVKARDAGAKAIVVSHHHGR----VP---------------FGVPPLK 212 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAA 304 L + N G L G D K++ LGA + L + D A Sbjct: 213 VLPAIKQALNGSRMTIFVDGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDK 272 Query: 305 IESLRKEFIVSMFLLGTKR 323 I+ + ++ M G + Sbjct: 273 IKKMNEQLAQMMLYTGVRD 291 >gi|254184880|ref|ZP_04891469.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1655] gi|184215472|gb|EDU12453.1| FMN-dependent dehydrogenase [Burkholderia pseudomallei 1655] Length = 440 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +++K + L D + G+ I+ GG S D+ Sbjct: 268 WADVKWLRARWPGRIVIKGI---LDPDDARRAVDEGVDGILISNHGGRQLDPAPSVMDVL 324 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + GG+R G D++K++ LGAS + ++ Sbjct: 325 PEIAE-----------------AVGKRTEILMDGGVRRGADVIKALALGASAVSIGRAYV 367 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V +E L+ E + ++ ++G + V EL Sbjct: 368 YGLGAAGEKGVSRCLELLKGEMLPALNMMGFESVAELR 405 >gi|299532051|ref|ZP_07045446.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] gi|298719966|gb|EFI60928.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Comamonas testosteroni S44] Length = 413 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 22/163 (13%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + I + L++K + L+ D + G + ++ GG + Sbjct: 262 RDHLNW-KNIERIRQRWKGNLIIKGI---LNEDDAVMATDIGAQGIVVSNHGGRQLDGVV 317 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + + + + G+R G D+LK++ LGA + Sbjct: 318 APLQMLP-----------------YVVDRVGHRTAVMMDSGIRRGSDVLKAVALGARMVF 360 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L PF+ A+ + V AI LR E +M +LG + E+ Sbjct: 361 LGRPFMYAAAVGGAQGVHHAITLLRDEVDRNMAMLGATSMAEI 403 >gi|229490714|ref|ZP_04384552.1| FMN-dependent dehydrogenase [Rhodococcus erythropolis SK121] gi|229322534|gb|EEN88317.1| FMN-dependent dehydrogenase [Rhodococcus erythropolis SK121] Length = 392 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK + + D + + +G+ ++ GG + + + Sbjct: 238 WEDIAWLREQWGGPFMLKGI---MRIDDAKRAVDAGVSAISVSNHGGNNLDGTPAPIRVL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A ++ + + GG+R G D++K++ LGA L +L Sbjct: 295 P---------GI--------AEAVGDQVEVVLDGGIRRGGDVVKALALGAKAVMLGRAYL 337 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ +R + LG + EL +I Sbjct: 338 WGLSANGQAGVENVLDLMRMGIDSGLMGLGHSSITELSPADLVI 381 >gi|330933749|ref|XP_003304283.1| hypothetical protein PTT_16815 [Pyrenophora teres f. teres 0-1] gi|311319211|gb|EFQ87638.1| hypothetical protein PTT_16815 [Pyrenophora teres f. teres 0-1] Length = 349 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 103/325 (31%), Gaps = 77/325 (23%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + + + R L +I +D SV G K S PL ++ + + + LA Sbjct: 46 ENISAYQKYRIRPRVLRDI--SSIDTSVSIFGHKNSIPLGVAPTA---MQCLAHDDGELA 100 Query: 81 --IAAEKTKVAMAVGSQRVM-FSD-HNAIKS---------FELRQYAPHTVLISN---LG 124 A + + M + S D + + S FE R + + + Sbjct: 101 TARACKNMDIVMGLSSFSTTSLEDVKSELASHPGALQLYLFEDRPKSQKLIQRAKKAGYK 160 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLN--------------PLQEIIQPNGNTNFAD 170 AV L D V + + + L HL +QE P+ T+ + Sbjct: 161 AVMLTVDTPV-LGRRNLEIRNQFTLPKHLKVANFARDEDDNEMVDVQEKDTPSTTTDQTN 219 Query: 171 ---------------------LSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSG 207 I+ L S + + +K + ++ D + Sbjct: 220 HHKPPQGPITFHTHAPNPTLCWDRDISWLKSQCGPEMQVWVKGIA---TAEDALIACHHD 276 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGG 266 + ++ GG + + D ++ + R + + GG Sbjct: 277 VDGIIVSNHGGRQLNGALATIDALPEV--------------VAAVRSHTGRKVPVHVDGG 322 Query: 267 LRNGVDILKSIILGASLGGLASPFL 291 +R+G D+ K++ LGA + P L Sbjct: 323 IRHGTDVFKALALGADFVWVGRPIL 347 >gi|242803238|ref|XP_002484133.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218717478|gb|EED16899.1| FMN dependent dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 422 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 120/373 (32%), Gaps = 75/373 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N+ F W LI L + F G++ +P+ I+ + G ++ Sbjct: 73 AGLRETDDNNRAAFRKWALIPSRLVKSDF--PSLKTALFGQEYDYPIAIAPI--GVQRIF 128 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP--------------- 115 R + LA AA K V S + A S + +++ Sbjct: 129 HR-DGELASATAARKQHVPYIFSSAAATSIEDVARASGDGKRWYQLYWPSNENNEITASL 187 Query: 116 -----------------------HTVLISN-----LGAVQLNYDFGVQKAHQAVHVLGAD 147 ++N L A ++ + G Sbjct: 188 LKRARDAGYSVLVVTLDTYILGWRPSDLNNGYNPFLRADKIGVELGFSDPVFRRKFRERH 247 Query: 148 GLFLHLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 G+ + + + +T F L + L D P++LK + S D + Sbjct: 248 GVEIEEDMATAASEW-AHTIFPGLSHGWEDLKFLQDHWDGPIVLKGIQ---SVADARRAV 303 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++G++ ++ GG D+ +I ++ + + Sbjct: 304 EAGVQGIVVSNHGGRQQDGGIGSLDVLPEI-----------------VDAVGDQIEVLFD 346 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R G DI K++ LGA + + P+ A+ V + + + +++ L G + Sbjct: 347 SGVRGGADIAKALALGAKMVLIGRPYAYGLAIAGEAGVTHVLRCILADLNLTLHLSGIQS 406 Query: 324 VQELYLNTALIRH 336 V +LN ++R Sbjct: 407 VAPEHLNRKVLRR 419 >gi|227878351|ref|ZP_03996306.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus crispatus JV-V01] gi|227862030|gb|EEJ69594.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus crispatus JV-V01] Length = 333 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 103/319 (32%), Gaps = 46/319 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R L E D + E GKK + PL +++++ N Sbjct: 39 ADDANVHNRAYLDNILVEMRLL---DSVEPDLTTEIFGKKYASPLTLAAVSHLNRVLPDK 95 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + A AA+ T + M + +R P+ +G ++ Sbjct: 96 TRKPMQEKARAAKNTNTLNWIGMESNEEYAEIVKEGGD---TVRIVKPYADHDKIMGELK 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + G + + D N +++ +G S + A+ +P + Sbjct: 153 QAEELGAVAVGMDIDHVPGD------NGKYDVV--DGIPLGPISFSDLEKYVHAVKLPFV 204 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 K V LS D +G + ++ G + +G+P Sbjct: 205 AKGV---LSVRDAVKARDAGAKAIVVSHHHGR----VP---------------FGVPPLK 242 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAA 304 L + N G L G D K++ LGA + L + D A Sbjct: 243 VLPAIKQALNGSGMTIFVDGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDK 302 Query: 305 IESLRKEFIVSMFLLGTKR 323 I+ + ++ M G K Sbjct: 303 IKKMNEQLAQMMLYTGVKD 321 >gi|54025177|ref|YP_119419.1| putative dehydrogenase [Nocardia farcinica IFM 10152] gi|54016685|dbj|BAD58055.1| putative dehydrogenase [Nocardia farcinica IFM 10152] Length = 400 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + + P++LK V + D + +G+ ++ GG + + Sbjct: 236 WDDVAWICEQWNGPVMLKGV---IRVDDARRAVDAGVAAISVSNHGGNNLDGTPAAVRAL 292 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I +E + + GG+R G D++K++ LGA + +L Sbjct: 293 PVIADT-----------------VGHEIEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 335 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ L +V +L ++ Sbjct: 336 WGLAANGQAGVENVLDILRGGIDSALLGLRKTKVTDLDRGDIVV 379 >gi|226305289|ref|YP_002765247.1| oxidoreductase [Rhodococcus erythropolis PR4] gi|3873403|gb|AAC77479.1| unknown [Rhodococcus erythropolis] gi|226184404|dbj|BAH32508.1| putative oxidoreductase [Rhodococcus erythropolis PR4] Length = 392 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK + + D + + +G+ ++ GG + + + Sbjct: 238 WEDIAWLREQWGGPFMLKGI---MRIDDAKRAVDAGVSAISVSNHGGNNLDGTPAPIRVL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 GI A ++ + + GG+R G D++K++ LGA L +L Sbjct: 295 P---------GI--------AEAVGDQVEVVLDGGIRRGGDVVKALALGAKAVMLGRAYL 337 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ +R + LG + EL +I Sbjct: 338 WGLSANGQAGVENVLDLMRMGIDSGLMGLGHSSITELSPADLVI 381 >gi|290955452|ref|YP_003486634.1| oxidoreductase [Streptomyces scabiei 87.22] gi|260644978|emb|CBG68064.1| putative oxidoreductase [Streptomyces scabiei 87.22] Length = 418 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 24/178 (13%) Query: 151 LHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H +P ++ G +A L D P++LK V L D L +G+ Sbjct: 250 VHEDPNAAVLHFAGMFGDPGKTWPDLAFLREHWDGPIVLKGV---LHPDDARLAADAGMD 306 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLR 268 ++ GG + GI +L +AR + + G+R Sbjct: 307 GVVVSNHGGRQVAG------------------GIGAADALPGVARAVGDRLTVLFDSGVR 348 Query: 269 NGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +G D+ K++ LGA L P++ A+D V I L EF +++ L G + Sbjct: 349 SGDDVFKALALGARAVLLGRPYVYGLALDGQPGVEHVIRCLLAEFDLTLALSGHRTPA 406 >gi|163743082|ref|ZP_02150465.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Phaeobacter gallaeciensis 2.10] gi|161383765|gb|EDQ08151.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Phaeobacter gallaeciensis 2.10] Length = 363 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 97/350 (27%), Gaps = 66/350 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G+ RN+ D L R L + + G + P I+ M G N Sbjct: 32 AGQETGVARNRAALDGIALRPRIL--RDVSQRSLATHVFGAEADRPFGIAPM-GMCNLAA 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A + +V V + F+L ++ L Sbjct: 89 PGADLMLARLAARYRVPHGVSTVASTPLEEIIETAEGYAWFQL-YFSGDGSGTFKLAERA 147 Query: 124 ---GAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQ---------------------- 157 G L V + + + + + P Q Sbjct: 148 RAAGYQTLVLTVDVPEVGRRPRELRHGFTMPFRIGPQQFIDFALHPRWSLTTLLKGKPVM 207 Query: 158 ---EIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 E+ + +A L L++K V L D + +G+ Sbjct: 208 ANFEMEGYEFDRTQSRARATWDTLARLRDLWPGKLVVKGV---LDVEDARALVSAGVDAI 264 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ G + ++ + I + GLR+G Sbjct: 265 QVSSHGARQLEAAPAPIEMLAKIRADL-----------------GPKFPVFYDSGLRSGE 307 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 D+LK+I +GA L A + ++ +E ++M G Sbjct: 308 DVLKAITMGADFVFLGRILQYAIAARGETGLAQLWHAISEELSIAMAQTG 357 >gi|167573629|ref|ZP_02366503.1| FMN-dependent dehydrogenase [Burkholderia oklahomensis C6786] Length = 412 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + + L + +++K + L S D + G+ I+ GG Sbjct: 232 RMIDSRLSWADVKWLRARWPGKIVIKGI---LDSDDARRAVDEGVDGILISNHGGRQLDP 288 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S D+ +I + + GG+R G D++K++ LGAS Sbjct: 289 APSAMDVLPEIAD-----------------AVGERTEILMDGGVRRGADVIKALALGASA 331 Query: 284 GGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + ++ V +E L+ E + ++ ++G + + EL Sbjct: 332 VSIGRAYIYGLGAAGEKGVARCLELLKSEMLPALNMMGFESIAELR 377 >gi|167566550|ref|ZP_02359466.1| FMN-dependent dehydrogenase [Burkholderia oklahomensis EO147] Length = 412 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + + L + +++K + L S D + G+ I+ GG Sbjct: 232 RMIDSRLSWADVKWLRARWPGKIVIKGI---LDSDDARRAVDEGVDGILISNHGGRQLDP 288 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S D+ +I + + GG+R G D++K++ LGAS Sbjct: 289 APSAMDVLPEIAD-----------------AVGERTEILMDGGVRRGADVIKALALGASA 331 Query: 284 GGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + ++ V +E L+ E + ++ ++G + + EL Sbjct: 332 VSIGRAYIYGLGAAGEKGVARCLELLKSEMLPALNMMGFESIAELR 377 >gi|222629585|gb|EEE61717.1| hypothetical protein OsJ_16218 [Oryza sativa Japonica Group] Length = 315 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 106/324 (32%), Gaps = 53/324 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F L + +D S+ LG +S P++I+ + Sbjct: 30 AEDQWTLRENSEAFSRILFQPVVL--VDVSCIDMSMSVLGYNISMPIMIAPTA---LHKL 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 LA A +++ D N ++ +L Q A + + V + Sbjct: 85 AHPEGELATARAAA-----AAETIMIYKDRNLVQ--QLIQRAEKAGYKAIVLTVDAPW-L 136 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEV 191 G ++A V + L + + Q + TN + L A ++S +D K++ Sbjct: 137 GRREAD--VKNRFTLPQNVMLKIFEGLDQGKIDETNGSGL---AAYVASQIDRSFSWKDI 191 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 + + + +K I T +E Sbjct: 192 KWLQTVTSLPVLVKGIITA--------------------------------QDTISCVEE 219 Query: 252 A-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLR 309 R G R G D+ K++ LGAS + P L A+D V A+ LR Sbjct: 220 VVREANGRVPVFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLR 279 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 E ++M L G V+E+ + Sbjct: 280 DELEITMALSGCTSVKEITRGHVV 303 >gi|33241203|ref|NP_876145.1| L-lactate dehydrogenase (FMN-dependent) related enzyme [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238733|gb|AAQ00798.1| L-lactate dehydrogenase (FMN-dependent) related enzyme [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 390 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 122/377 (32%), Gaps = 90/377 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHR---ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN 69 ++ + +N F++ R A P + + L ++ P +++ + G++ Sbjct: 36 ADREQTLSQNCAAFNEIFFRPRCAVATPTCN-----LTTSVLDQEFQLPFMLAPV--GSS 88 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---------SFEL-----RQYAP 115 ++ + +AA + A G S ++L R A Sbjct: 89 RLFYP--KGEVVAAREAGKA-GTGYTLSTLSGCRLEDVKEATNSPAWYQLYLLGGRDVAL 145 Query: 116 HTVLISNL---GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL-------QEIIQP--- 162 T+ + L A+ + D V + +L L NP+ Q +++P Sbjct: 146 KTIQRAKLAGFSAIVVTIDTPVSGLRER-DLLNGTKELLSRNPIKMLPYLSQMVVKPCWM 204 Query: 163 ------NGNTNFADL----------------------SSKIALLSSAMDVPLLLKEVGCG 194 G +F ++ + + A +++K V G Sbjct: 205 TQWLGDGGLMSFPNVELEDGPMGYTEIGPALEASVVTWEDLKWIREAWGGKIVVKGVHIG 264 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 D L G+ ++ G + + ++ + Sbjct: 265 ---DDARKALALGVDAIVVSNHGARQLDSVAPTIRVLPEV-----------------VKA 304 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFI 313 + + GG+R G D++K++ LGA + + A V AIE ++ + + Sbjct: 305 VNGKIDVLLDGGIRRGGDVIKALCLGAKGVLIGRAYAYGLAAAGGPGVARAIEIIKTDVL 364 Query: 314 VSMFLLGTKRVQELYLN 330 +M LLG V+ L + Sbjct: 365 RTMKLLGCDSVKSLNNS 381 >gi|58337859|ref|YP_194444.1| glycolate oxidase [Lactobacillus acidophilus NCFM] gi|58255176|gb|AAV43413.1| glycolate oxidase [Lactobacillus acidophilus NCFM] Length = 340 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 56/324 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D N+ + D + R I E D + GKK + PL+ + Sbjct: 45 ADDANVHNRHYLDRLLVEMRV---IDAVEPDLTTTIFGKKYASPLM--------PAALSH 93 Query: 75 INRNL-----------AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISN 122 +N+ L AIAA + + +G + +S+ A +R P Sbjct: 94 LNKILDDKNRKPMQEKAIAARELNLLNWIGMETNEEYSEIVAEGGDTIRIIKPFADPQKI 153 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G ++ D G + + + N +++ +G + + +++ Sbjct: 154 MGEIKFAEDHGAVAVGIDIDHIAGE------NGKYDVV--DGIPLGSIRMDDLKKYAAST 205 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P + K V LS D ++G + ++ G +G Sbjct: 206 ELPFIAKGV---LSVADALKARQAGCKAIVVSHHHGRV-------------------PFG 243 Query: 243 IPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 IP L + + Q G L +G D K++ LGA + L + + ++ Sbjct: 244 IPPLSILPEIKKALIGSGMQIFVDGSLMSGYDAYKALALGADAVLIGRGILPEVLKNGTE 303 Query: 300 AVVAAIESLRKEFIVSMFLLGTKR 323 A ++ + ++ M G K Sbjct: 304 ATKNKLQKMNEQLSEMMLYTGIKD 327 >gi|15840099|ref|NP_335136.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Mycobacterium tuberculosis CDC1551] gi|13880248|gb|AAK44950.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Mycobacterium tuberculosis CDC1551] gi|323720918|gb|EGB29984.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis CDC1551A] Length = 419 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 380 >gi|83716716|ref|YP_438779.1| FMN-dependent dehydrogenase [Burkholderia thailandensis E264] gi|167615296|ref|ZP_02383931.1| FMN-dependent dehydrogenase [Burkholderia thailandensis Bt4] gi|257141860|ref|ZP_05590122.1| FMN-dependent dehydrogenase [Burkholderia thailandensis E264] gi|83650541|gb|ABC34605.1| FMN-dependent dehydrogenase [Burkholderia thailandensis E264] Length = 412 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 111/367 (30%), Gaps = 73/367 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + + N+ F W L + L + + +LG + P+L+ + G Sbjct: 33 ANSETTMRANENDFARWRLRQKVLTGVQSSAAGLNATYLGAEHRLPILLGPVGFAGMYWP 92 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKS---------FELRQYAPHTVLIS 121 I AA++ + + + + + A +S F R + Sbjct: 93 RGEIAA--GRAADEAGIGQCLSTFSICSLEEVAAARSGPLYFQLYMFRDRDLTEDILARC 150 Query: 122 NLGAVQLNY-----------DFGVQKAHQAVHVLGADGL--------------------- 149 V + + + +A L A G+ Sbjct: 151 RQANVDVVVLTVDTCHIPIRERDARNGFRAATRLSARGVWSMLKCPGWCVGALSNGVPKI 210 Query: 150 -------FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + L++ + + + L + +++K + L D Sbjct: 211 GNVLRYPDLGTSLLEQSAAVGRMIDSRLSWADVKWLRARWPGKIIIKGI---LDPDDARR 267 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + G+ I+ GG S D+ +I + + Sbjct: 268 AVDEGVDGILISNHGGRQLDPAPSAMDVLPEIAD-----------------AVGTRTEIL 310 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+R G D++K++ LGA + ++ V +E L+ E + ++ ++G Sbjct: 311 MDGGVRRGADVIKALALGAGAVSIGRAYIYGLGAAGETGVSRCLELLKGEMLPALNMMGF 370 Query: 322 KRVQELY 328 + + EL Sbjct: 371 ESIAELR 377 >gi|113476107|ref|YP_722168.1| L-lactate dehydrogenase (cytochrome) [Trichodesmium erythraeum IMS101] gi|110167155|gb|ABG51695.1| L-lactate dehydrogenase (cytochrome) [Trichodesmium erythraeum IMS101] Length = 385 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 110/386 (28%), Gaps = 96/386 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + RN + + + LI L + + VD SVE +G+KL P+ + T Sbjct: 32 ADDEQSYRRNTEAYGECDLIPNVL--VGVENVDMSVEVMGQKLDMPIYCAP-TALQRLFH 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 R +A AA K V S + + A + P + D Sbjct: 89 HEGERAVARAAAKYGTMFGVSSLATVTVEEIAEIT-----NTPKMFQFY------FHKDR 137 Query: 133 GVQKA-HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL------------- 178 G+ A + + L L ++ I N + + L Sbjct: 138 GLNDALLERARAANFNVLALTVDT---ITGGNRERDLRTGFTSPPKLTLGSFMSFATHPA 194 Query: 179 -------SSAMDVPLLLKEVGCG------------------LSSMDIELG---------- 203 D+P L V G ++ D E Sbjct: 195 WAWNFLTKEKFDMPHLSGYVSQGTNLAVSVGDYFSTMLDQSMNWNDAEKLCAQWNGQFAL 254 Query: 204 ------------LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 + G ++ GG S D ++I Sbjct: 255 KGIMSVEDAKRAIDIGCTGIIVSNHGGRQLDGSRSPFDQLAEI----------------- 297 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 ++ I GG++ G +LK++ +GA +L A V + ++R Sbjct: 298 CDAVGDKIDVICEGGIQRGTHVLKALSVGAKACSGGRLYLYALAAAGRAGVERVLGNMRT 357 Query: 311 EFIVSMFLLGTKRVQELYLNTALIRH 336 E M L+G ++ +L + H Sbjct: 358 EIERDMKLMGVTKLDQLSRDNLRFHH 383 >gi|118462266|ref|YP_883612.1| FMN-dependent dehydrogenase [Mycobacterium avium 104] gi|118163553|gb|ABK64450.1| FMN-dependent dehydrogenase [Mycobacterium avium 104] Length = 394 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIAWLREVWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAIAE-----------------AVGDQIEVLLDGGVRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG V +L + L+ Sbjct: 337 WGLAAAGQAGVENVLDILRGGIDSALMGLGHSSVHDLGPSDILV 380 >gi|288931651|ref|YP_003435711.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ferroglobus placidus DSM 10642] gi|288893899|gb|ADC65436.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ferroglobus placidus DSM 10642] Length = 311 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 109/314 (34%), Gaps = 42/314 (13%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER-INR 77 + RN++F D + A+ + V+ FLG+K+S P++ + ++G + ER R Sbjct: 35 VKRNREFLDSIGIRMNAI--NDVESVELETVFLGRKISLPVMPAPLSGLVKAVDERCFER 92 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + + E V + + ++ + + + V Sbjct: 93 IINESWEAGVVPWIGYPIQDEVEKFEKPFVWIIKPLENRKKIYEEIERAEKTKALAV--- 149 Query: 138 HQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 V + A G+ + N L +P + L+S +P ++K V LS Sbjct: 150 --GVDIDSAAGVKVKHNVLSYGGTKPLSRRE-------LEDLASTTKLPFVVKGV---LS 197 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D L I+ GG S ++ DI + + T + Sbjct: 198 EKDYYLAANFS-DVVVISNHGGRVLDSAVSPLEVLDDIEKM-----VTTGV--------- 242 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 G R G D+ K++ GA + P + V + +R+E M Sbjct: 243 -------DSGFRYGTDVFKALAYGADFVLIGRPVVYALAI-ESGVKKLLSVIREELRRIM 294 Query: 317 FLLGTKRVQELYLN 330 L G+K V+E+ + Sbjct: 295 ILTGSKSVREIDRS 308 >gi|16264899|ref|NP_437691.1| hypothetical protein SM_b20858 [Sinorhizobium meliloti 1021] gi|15141038|emb|CAC49551.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium meliloti 1021] Length = 161 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + A + +A PL+LK + L D ++ K+G ++ GG S + Sbjct: 20 REAGICAAGAGPLILKGI---LDPEDAKMAAKTGADAIIVSNHGGRQLDGAHSSISMLPR 76 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I ++ + GG+R+G D+LK+I LGA + PFL Sbjct: 77 I-----------------VEAVGDQIEVHLDGGIRSGHDVLKAIALGAKGTYIGRPFLYG 119 Query: 294 AMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + A++ +RKE +M L G +R+ E Sbjct: 120 LGALGKEGMTLALDIIRKEMDTTMALCGKRRITE 153 >gi|332285905|ref|YP_004417816.1| L-lactate dehydrogenase [Pusillimonas sp. T7-7] gi|330429858|gb|AEC21192.1| L-lactate dehydrogenase [Pusillimonas sp. T7-7] Length = 402 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 23/164 (14%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + + S + L++K V LS+ D + G ++ GG Sbjct: 241 SDRSHLNWSY-FERIRQIWPGKLIIKGV---LSAPDARTAVGLGADGIIVSNHGGRQLDG 296 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + L C E + G+R G D +K++ LGA Sbjct: 297 SVAPLRV------------------LPQIVRACPEVPVMMDSGIRRGSDAVKALALGARF 338 Query: 284 GGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 + PF A +A V+ A++ L E + +LG R+ + Sbjct: 339 VFVGRPFNYAAAIGGEAGVLRAMDLLAAELRRNTAMLGLTRLAD 382 >gi|41410252|ref|NP_963088.1| LldD1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399086|gb|AAS06704.1| LldD1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 394 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIAWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAIAE-----------------AVGDQIEVLLDGGVRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG V +L + L+ Sbjct: 337 WGLAAAGQAGVENVLDILRGGIDSALMGLGHSSVHDLGPSDILV 380 >gi|119897307|ref|YP_932520.1| L-lactate dehydrogenase [Azoarcus sp. BH72] gi|119669720|emb|CAL93633.1| L-lactate dehydrogenase [Azoarcus sp. BH72] Length = 382 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 111/359 (30%), Gaps = 71/359 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R ++ D G++++ P+ I+ TG G Sbjct: 35 ESTYRANEADFQSIKLRQRV--AVNMDGRTLRTTMAGQEVAMPVAIAP-TGLTGMQHADG 91 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTV---LI 120 I A AAEK V + + + + A + F++ R + + Sbjct: 92 EILA--ARAAEKFGVPFTLSTMSICSIEDVAAHTTAPFWFQVYVMRDRDFVERLIDRAKA 149 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNG-NTNFAD 170 + A+ L D ++ A A+ + L P + +F + Sbjct: 150 ARCSALMLTLDLQILGQRHKDLKNGLSAPPKPTLANLINLATKPRWCLGMLRTPRRSFGN 209 Query: 171 LSSK----------IALLSSAMDVPLLLKEVGC-------------GLSSMDIELGLKSG 207 + + + D L +V + + D L SG Sbjct: 210 IVGHARGVGDMSSLASWTAEQFDPGLSWADVEWIKKRWGGKLILKGIMDAEDARLAADSG 269 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S GI + GG+ Sbjct: 270 ADALVVSNHGGRQLDGAPSSIHALP---------GI--------VDAVGKSIEVWMDGGI 312 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 R+G D+ K++ +GA + FL +A V ++E +RKE ++M G ++ Sbjct: 313 RSGQDVFKAVAMGARGTLIGRAFLYGLGAMGEAGVAKSLELIRKELDLTMAFCGHTDIR 371 >gi|215410248|ref|ZP_03419056.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis 94_M4241A] gi|298524186|ref|ZP_07011595.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis 94_M4241A] gi|298493980|gb|EFI29274.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis 94_M4241A] Length = 396 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 380 >gi|58613942|gb|AAW79575.1| MdlB [Pseudomonas fluorescens] Length = 397 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 106/368 (28%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GN-- 68 + G+ N++ F + R L + + D S GK+ S PLLI TG G Sbjct: 32 AEDEQGLQHNREVFQNVRFKPRRL--MDVSQRDLSTSLFGKRQSLPLLIGP-TGLNGALW 88 Query: 69 --------------------NKMIERINRNLAIAAEKTKV-----------------AMA 91 + +LA + A+A Sbjct: 89 PEGDLALARAASRAGIPFVLSTASNLSIEDLARRCDGELWFQLYVVHRTLAEQMVERALA 148 Query: 92 VGSQRVMFSDHNAIKSFELRQ----------YAPHTVLISNLGAVQLNYDFGVQKAHQ-A 140 G + ++ + A+ + R Y P +L L+ + + Sbjct: 149 AGYKTLVLTTDVAVNGYRERDLRNQFKMPMSYTPRVMLDG-----CLHPRWSLDLVRHGM 203 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + +Q + D + L LL+K + L + D Sbjct: 204 PELANFVSSEASSLEVQAALMSRQMDASFDW-QALRWLRDKWPHTLLVKGL---LDADDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + G+ ++ GG S ++ ++ P + Sbjct: 260 ARCIAEGVDGVILSNHGGRQLDTAISPFEVL--------------AETVRKVSPPSTDRT 305 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLL 319 G R G DI+K++ +GA+ L L A V + L+ + ++ + Sbjct: 306 -----GFRRGADIVKALAMGANAVLLGRATLYGLAARGEAGVDDVLRLLKADIDRTLAQI 360 Query: 320 GTKRVQEL 327 G + L Sbjct: 361 GCPSIAYL 368 >gi|317144432|ref|XP_001820117.2| hypothetical protein AOR_1_1794154 [Aspergillus oryzae RIB40] Length = 391 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 71/342 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D N+K F W ++ L + F G+ +P+ I+ + G ++ Sbjct: 56 AGTRETDDNNRKAFRKWGIVPSRLVKSDF--PSLKTTLFGEDYEYPIAIAPV--GVQRIF 111 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMF------SDHNAIKSFEL--------------- 110 R +A A+ + + S ++ + + F+L Sbjct: 112 HRDGEVAVASTAQNEGITYILSSASSTSIEDVAEANGDGSRWFQLYWPSNEHNDITASLL 171 Query: 111 ---RQYAPHTVLIS--------------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 + ++++ N L D + + V H Sbjct: 172 KRAKAANYKVLVVTLDTYILGWRPSDLENGYNPFLRKDNIGVEIGFSDPVFQKKFAEKHG 231 Query: 154 NPLQEIIQPNG----NTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +QE + + F + + L D P++LK + + D +L ++ Sbjct: 232 KSIQEDMATAAAEWAHMIFPGMSHGWEDLQFLRQHWDGPIVLKGIQ---TVEDAKLAVEY 288 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G++ ++ GG D+ DI + + I G Sbjct: 289 GMQGIVVSNHGGRQQDGGVGSLDMLPDI-----------------VDAVGKDLEVIFDSG 331 Query: 267 LRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIES 307 +R G D+ K++ LGA + + P++ A+ + V ++S Sbjct: 332 VRCGADVAKALALGAKMVLIGRPYVYGLAIAGREGVRHVLQS 373 >gi|256849217|ref|ZP_05554650.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] gi|262047233|ref|ZP_06020191.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] gi|312978392|ref|ZP_07790134.1| (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus CTV-05] gi|256713993|gb|EEU28981.1| glycolate oxidase [Lactobacillus crispatus MV-1A-US] gi|260572478|gb|EEX29040.1| glycolate oxidase [Lactobacillus crispatus MV-3A-US] gi|310894735|gb|EFQ43807.1| (S)-2-hydroxy-acid oxidase [Lactobacillus crispatus CTV-05] Length = 303 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 101/317 (31%), Gaps = 42/317 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R L E D + E GKK + PL +++++ N Sbjct: 9 ADDANVHNRAYLDNILVEMRLL---DSVEPDLTTEIFGKKYASPLTLAAVSHLNRVLPDK 65 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + A AA+ T + M + +R P+ +G ++ Sbjct: 66 TRKPMQEKARAAKNTNTLNWIGMESNEEYAEIVKEGGD---TVRIVKPYADHDKIMGELK 122 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + G + + D N +++ +G S + A+ +P + Sbjct: 123 QAEELGAVAVGMDIDHVPGD------NGKYDVV--DGIPLGPISFSDLEKYVHAVKLPFV 174 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 K V LS D +G + ++ G + + + I G+ Sbjct: 175 AKGV---LSVRDAVKARDAGAKAIVVSHHHGRVPFGVPPLK-VLPAIKQALNGSGMT--- 227 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIE 306 G L G D K++ LGA + L + D A I+ Sbjct: 228 -------------IFVDGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDKIK 274 Query: 307 SLRKEFIVSMFLLGTKR 323 + ++ M G K Sbjct: 275 KMNEQLAQMMLYTGVKD 291 >gi|126698408|ref|YP_001087305.1| putative oxidative stress protein [Clostridium difficile 630] gi|255099941|ref|ZP_05328918.1| putative oxidative stress protein [Clostridium difficile QCD-63q42] gi|255305830|ref|ZP_05350002.1| putative oxidative stress protein [Clostridium difficile ATCC 43255] gi|115249845|emb|CAJ67662.1| putative oxidative stress glutamate synthase [Clostridium difficile] Length = 480 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 135/366 (36%), Gaps = 75/366 (20%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD ++ LP DEV+ +GKK + P+ IS M+ G +I Sbjct: 116 SWDDILIMGAQLNPLPLNEHDEVNT-TTIIGKKAKKPMIIENPVYISHMSFGALSKELKI 174 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNY 130 LA A + K AM G ++ + A + + +Y P+ ++ N A+++ Sbjct: 175 --ALAKGAAQNKTAMCSGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKI 231 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQP------NGNTNFADLSSKIALLSS 180 G + H + + + P+ Q++I P + L ++ +S Sbjct: 232 GQGTKPGMGGHLPGEKVTEEIAKVRNKPVGQDVISPSCFEEIQSKEDLKKLVDELREVSE 291 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ +K + G D+E + + I GRGG + + + +D S Sbjct: 292 --GRPIGVK-ISAGHIEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS-------- 340 Query: 241 WGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-- 294 IPT +L AR Y + + + +GGLR D K+I +GA +AS L A Sbjct: 341 --IPTIFALYRARKYIDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAAAC 398 Query: 295 ----------------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +S++ V + +E + G K + + Sbjct: 399 QQYRICGSGKCPVGVATQDEELRKRLHIENSANRVANFLNVSLEELKTFARISGHKDIHD 458 Query: 327 LYLNTA 332 L ++ Sbjct: 459 LSVDDL 464 >gi|186472041|ref|YP_001859383.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gi|184194373|gb|ACC72337.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 399 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 117/368 (31%), Gaps = 76/368 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + GI N++ F+ W L+ R + + + L + S P +S TG + R Sbjct: 41 DEHGIVHNREVFNRWALVPRYMQ--DVSDRSTATSILETRHSAPFGVSP-TGFAGLLRPR 97 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFEL-----RQYAPHTVLISNLG 124 + LA AA + + + + A + F+L RQ + V + Sbjct: 98 ADLMLARAANEAGLPFVLSGVSNATLESVAAEIGEALWFQLYPSRDRQISDDMVRRAGSA 157 Query: 125 AVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQP---------NGNTNFA 169 V + D V + G L P L+ + P G FA Sbjct: 158 GVTHLVVTVDLPVTSNRER-DARNGFGFPPALKPSGYLEAMTHPAWCLRYLTSGGAPLFA 216 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + S + L + L++K + L D Sbjct: 217 NWTEYASENPSTSDVARLIKSNSPAMFTWSDVRRLRDSWPHKLIVKGI---LHPDDALNA 273 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + G+ I+ GG R + + + R ++ + Sbjct: 274 QRHGVDAVIISNHGGRQLDRAIASINALP-----------------LIRREVGDDFPLMI 316 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DI ++ LGA+ + P L A AI+ LR EF M LG Sbjct: 317 DGGVRRGSDIAIALCLGANFVFVGRPTLYGVAAAGEAGASRAIQILRTEFDRVMGQLGAT 376 Query: 323 RVQELYLN 330 R + L + Sbjct: 377 RPEILDTS 384 >gi|121720008|ref|XP_001276702.1| FMN dependent dehydrogenase, putative [Aspergillus clavatus NRRL 1] gi|119404914|gb|EAW15276.1| FMN dependent dehydrogenase, putative [Aspergillus clavatus NRRL 1] Length = 401 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 115/372 (30%), Gaps = 73/372 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F W LI L + F G++ +P+ I+ + G ++ Sbjct: 52 AGLRETDNNNREAFRKWALIPSRLVKSDF--PSLKTTLFGQEYDYPIAIAPI--GVQRIF 107 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-----------HTVLI 120 R A AA K V + S + A + + ++ L+ Sbjct: 108 HRDGEVATATAARKQHVPYILSSAAATSIEDVARANADGNRWYQLYWPSNENNEITVSLL 167 Query: 121 SN--------------------------------LGAVQLNYDFGVQKAHQAVHVLGADG 148 + L A ++ + G G Sbjct: 168 ARARAAGYSVLVVTLDTYILGWRPSDLNNGYNPFLRADKIGVELGFSDPVFRRRFREKHG 227 Query: 149 LFLHLN---PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + E Q I L D P++LK + + D ++ Sbjct: 228 VEIEEDMGTAASEWAQTIFPGLSHGWED-IKFLQDHWDGPIVLKGIQ---TVADARRAVE 283 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G++ ++ GG D+ +I + + + Sbjct: 284 AGVQGIVVSNHGGRQQDGGIGSLDVLPEI-----------------VDAVGGQIEVLFDS 326 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+ K++ LGA + + P+ A+ V + + + +++ L G + V Sbjct: 327 GVRGGADVAKALALGAKMVLIGRPYAYGLAIAGEAGVSHVLRCILGDLNLTLHLSGIQSV 386 Query: 325 QELYLNTALIRH 336 +LN ++R Sbjct: 387 SPEHLNREVLRR 398 >gi|15607834|ref|NP_215208.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium tuberculosis H37Rv] gi|31791878|ref|NP_854371.1| L-lactate dehydrogenase (cytochrome) LldD1 [Mycobacterium bovis AF2122/97] gi|121636615|ref|YP_976838.1| putative L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660469|ref|YP_001281992.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Mycobacterium tuberculosis H37Ra] gi|148821899|ref|YP_001286653.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis F11] gi|167967933|ref|ZP_02550210.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis H37Ra] gi|215402477|ref|ZP_03414658.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis 02_1987] gi|215444816|ref|ZP_03431568.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis T85] gi|218752345|ref|ZP_03531141.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis GM 1503] gi|224989087|ref|YP_002643774.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797636|ref|YP_003030637.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 1435] gi|254231015|ref|ZP_04924342.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis C] gi|254363642|ref|ZP_04979688.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis str. Haarlem] gi|254549654|ref|ZP_05140101.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185575|ref|ZP_05763049.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis CPHL_A] gi|260203864|ref|ZP_05771355.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis K85] gi|289446253|ref|ZP_06435997.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis CPHL_A] gi|289552950|ref|ZP_06442160.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 605] gi|289573302|ref|ZP_06453529.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis K85] gi|289744418|ref|ZP_06503796.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis 02_1987] gi|289756782|ref|ZP_06516160.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T85] gi|289760820|ref|ZP_06520198.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis GM 1503] gi|294996188|ref|ZP_06801879.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis 210] gi|297633192|ref|ZP_06950972.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 4207] gi|297730172|ref|ZP_06959290.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN R506] gi|306774804|ref|ZP_07413141.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu001] gi|306781463|ref|ZP_07419800.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu002] gi|306783345|ref|ZP_07421667.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu003] gi|306787714|ref|ZP_07426036.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu004] gi|306794481|ref|ZP_07432783.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu005] gi|306796447|ref|ZP_07434749.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu006] gi|306802307|ref|ZP_07438975.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu008] gi|306806517|ref|ZP_07443185.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu007] gi|306966715|ref|ZP_07479376.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu009] gi|306970908|ref|ZP_07483569.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu010] gi|307078636|ref|ZP_07487806.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu011] gi|307083200|ref|ZP_07492313.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu012] gi|313657499|ref|ZP_07814379.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN V2475] gi|81345845|sp|P95040|LLDD1_MYCTU RecName: Full=Putative L-lactate dehydrogenase [cytochrome] 1 gi|1806160|emb|CAB06457.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD1 [Mycobacterium tuberculosis H37Rv] gi|31617465|emb|CAD93575.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD1 [Mycobacterium bovis AF2122/97] gi|121492262|emb|CAL70729.1| Possible L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600074|gb|EAY59084.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis C] gi|134149156|gb|EBA41201.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis str. Haarlem] gi|148504621|gb|ABQ72430.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Mycobacterium tuberculosis H37Ra] gi|148720426|gb|ABR05051.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis F11] gi|224772200|dbj|BAH25006.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319139|gb|ACT23742.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 1435] gi|289419211|gb|EFD16412.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis CPHL_A] gi|289437582|gb|EFD20075.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 605] gi|289537733|gb|EFD42311.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis K85] gi|289684946|gb|EFD52434.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis 02_1987] gi|289708326|gb|EFD72342.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis GM 1503] gi|289712346|gb|EFD76358.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T85] gi|308216697|gb|EFO76096.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu001] gi|308325761|gb|EFP14612.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu002] gi|308331841|gb|EFP20692.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu003] gi|308335627|gb|EFP24478.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu004] gi|308337244|gb|EFP26095.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu005] gi|308343108|gb|EFP31959.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu006] gi|308346993|gb|EFP35844.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu007] gi|308350973|gb|EFP39824.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu008] gi|308355569|gb|EFP44420.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu009] gi|308359528|gb|EFP48379.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu010] gi|308363432|gb|EFP52283.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu011] gi|308367071|gb|EFP55922.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis SUMu012] gi|326905084|gb|EGE52017.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis W-148] gi|328457417|gb|AEB02840.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis KZN 4207] Length = 396 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 380 >gi|254465907|ref|ZP_05079318.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] gi|206686815|gb|EDZ47297.1| L-lactate dehydrogenase [Rhodobacterales bacterium Y4I] Length = 383 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 109/365 (29%), Gaps = 77/365 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + RN+ D + L E D S FLG + P I+ + G + + Sbjct: 35 AEQARARNRTALDRICFLPSVLHGPM--EPDLSTVFLGMAQALPFGIAPV-GMSGLIWPG 91 Query: 75 INRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKS--FELRQYAPHTVLISNL------ 123 LA +A + V S+ + + F+L + L Sbjct: 92 AEAALARSAAAAGIPFCLSTVASRSPEDLAPHLGQDAWFQLYPPKDEGIRADLLARARDA 151 Query: 124 GAVQLNYDFGVQKAHQ-----------------------AVHVLGADGLFLHLNPL---- 156 G L V A + AV A G+ H P Sbjct: 152 GFRTLVLTVDVPAASRRERQTRSGLTQPPRLTPRLLAQIAVRPAWALGMARHGMPHMRTL 211 Query: 157 -------QEIIQPNGN-----TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 Q+ + P + D +A L D P ++K V L + D + Sbjct: 212 DKYISGAQKNLPPTAHVGYLLRTSPDWEY-VAWLRRNWDGPFVVKGV---LRAQDAKRLE 267 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++G I+ GG + + ++ +I Q I Sbjct: 268 EAGADAVWISNHGGRQFDGCPAAIEVLPEIREAVQ-------------------IPLIFD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+ G+DI++++ LGA L A +D L K+ +M LGT Sbjct: 309 SGIEGGLDIIRALALGADFVMLGRACHYALAALGADGPAHLTGILAKDMQANMSQLGTPD 368 Query: 324 VQELY 328 + L Sbjct: 369 LAALK 373 >gi|256393248|ref|YP_003114812.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] gi|256359474|gb|ACU72971.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Catenulispora acidiphila DSM 44928] Length = 385 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 68/376 (18%), Positives = 115/376 (30%), Gaps = 74/376 (19%) Query: 2 VNDRKID--HINIVC----KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 V RK+D H + + + + N+ F L+ R L + D SV G + Sbjct: 35 VAQRKLDPVHYDYIAGGSRDEVTVRANEDGFGRLSLLPRVLRGS--AQRDLSVTLFGGQS 92 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA----MAVGSQRVMFSDHNAIKSFELR 111 S P+LI + R+ A A + + S + + Sbjct: 93 SMPVLI------SPTAFHRLVCAEGEIATARAAARAGTIMIASMASTVAVGEVAAAARAA 146 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP----LQEIIQP----- 162 L L +Q + D +A G L + ++ E Q Sbjct: 147 AGDGDPTLWFQL-YLQPDMDDTTALIARATDA-GCRALVVTVDSPVLGANERNQRNNFDD 204 Query: 163 -------NGNTNFAD---------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 N I L +P+LLK V L D Sbjct: 205 LPPEMACENLRNLRGDEPGNVRQIAMSPELSWEHIDWLREHTRLPILLKGV---LHPEDA 261 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + + GI ++ GG + + DL + Sbjct: 262 RIAIAHGIDGLLLSNHGGRQLDTVPATIDLLPEF-----------------VAAVDGSVP 304 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + GG+R G D++K++ LGA+ G+ P A + +E LR E ++ L Sbjct: 305 VLLDGGVRRGTDVVKALALGAAAVGVGRPIVWGLATAGEEGATRVLELLRDEVDHTVALC 364 Query: 320 GTKRVQELYLNTALIR 335 G + + +L L+R Sbjct: 365 GARGLADL--TPDLVR 378 >gi|215429534|ref|ZP_03427453.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis EAS054] gi|289752742|ref|ZP_06512120.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis EAS054] gi|289693329|gb|EFD60758.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis EAS054] Length = 396 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 380 >gi|187479870|ref|YP_787895.1| L-lactate dehydrogenase [Bordetella avium 197N] gi|115424457|emb|CAJ51011.1| L-lactate dehydrogenase [Bordetella avium 197N] Length = 387 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 115/371 (30%), Gaps = 79/371 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N+ F L R + + + G + P+ ++ TG G Sbjct: 34 AWTEGTYRANESDFQKIKLRQRV--AVDMEGRSLATTMAGMDVKMPVALAP-TGLTGMQH 90 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLI 120 I A AA + V + + + + A + F+L R++A + + Sbjct: 91 ADGEILA--AQAAAEFGVPFTLSTMSICSIEDVAQATQKPFWFQLYVMRNREFAANLIDR 148 Query: 121 SNL-GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP-----LQEIIQPN--------GNT 166 + G L +Q Q + +GL P + ++P Sbjct: 149 AKAAGCSALVLTLDLQILGQRHKDIK-NGLSAPPKPTLRNLMNLALKPRWCMGMLGTRRR 207 Query: 167 NFADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 F ++ +A + L+LK + L + D Sbjct: 208 TFGNIVGHAKGVKDLSSLSSWTAEQFDPRLSWDDVAWIKERWGGKLILKGI---LDAEDA 264 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L SG ++ GG S ++ I + + Sbjct: 265 RAALSSGADALVVSNHGGRQLDGALSTIEVLPSI-----------------VSEVGSRME 307 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLL 319 G+R+G D+LK++ LGA + FL V A+E + KE ++M L Sbjct: 308 VWLDSGVRSGQDVLKAVALGARGTMIGRAFLYGLGAYGRAGVTRALEIIYKEADITMALC 367 Query: 320 GTKRVQELYLN 330 G K + ++ + Sbjct: 368 GRKHISQIDHS 378 >gi|115314765|ref|YP_763488.1| L-lactate dehydrogenase (cytochrome) [Francisella tularensis subsp. holarctica OSU18] gi|115129664|gb|ABI82851.1| L-lactate dehydrogenase (cytochrome) [Francisella tularensis subsp. holarctica OSU18] Length = 295 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L + D L++K + L++ E +K G ++ GG + Sbjct: 153 WKDIEWLRNIWDGNLIIKGL---LNTQGAENAVKVGADGIVVSNHGGRQLDGV------- 202 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +PT +L ++ + + I G+R+ DI+K++ LGA + PF Sbjct: 203 -----------LPTIEALPAISDKVKGDIKIILDSGIRSDQDIIKALALGADFTLVGRPF 251 Query: 291 LKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 L V + L+KE +M L G + Sbjct: 252 LYGLSAFGQKGVEKVYDILKKEIDNTMALAGISDLN 287 >gi|215425935|ref|ZP_03423854.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis T92] gi|260199703|ref|ZP_05767194.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T46] gi|289442094|ref|ZP_06431838.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T46] gi|289749201|ref|ZP_06508579.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T92] gi|289415013|gb|EFD12253.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T46] gi|289689788|gb|EFD57217.1| L-lactate dehydrogenase lldD1 [Mycobacterium tuberculosis T92] Length = 396 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 337 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 380 >gi|254974447|ref|ZP_05270919.1| putative oxidative stress protein [Clostridium difficile QCD-66c26] gi|255091839|ref|ZP_05321317.1| putative oxidative stress protein [Clostridium difficile CIP 107932] gi|255313574|ref|ZP_05355157.1| putative oxidative stress protein [Clostridium difficile QCD-76w55] gi|255516258|ref|ZP_05383934.1| putative oxidative stress protein [Clostridium difficile QCD-97b34] gi|255649355|ref|ZP_05396257.1| putative oxidative stress protein [Clostridium difficile QCD-37x79] gi|260682527|ref|YP_003213812.1| putative oxidative stress protein [Clostridium difficile CD196] gi|260686126|ref|YP_003217259.1| putative oxidative stress protein [Clostridium difficile R20291] gi|306519445|ref|ZP_07405792.1| putative oxidative stress protein [Clostridium difficile QCD-32g58] gi|260208690|emb|CBA61486.1| putative oxidative stress protein [Clostridium difficile CD196] gi|260212142|emb|CBE02783.1| putative oxidative stress protein [Clostridium difficile R20291] Length = 480 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 135/366 (36%), Gaps = 75/366 (20%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD ++ LP DEV+ +GKK + P+ IS M+ G +I Sbjct: 116 SWDDILIMGAQLNPLPLNEHDEVNT-TTIIGKKAKKPMIIENPVYISHMSFGALSKELKI 174 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNY 130 LA A + K AM G ++ + A + + +Y P+ ++ N A+++ Sbjct: 175 --ALAKGAAQNKTAMCSGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKI 231 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQP------NGNTNFADLSSKIALLSS 180 G + H + + + P+ Q++I P + L ++ +S Sbjct: 232 GQGTKPGMGGHLPGEKVTEEIAKVRNKPVGQDVISPSCFEEIQSKEDLKKLIDELREVSE 291 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ +K + G D+E + + I GRGG + + + +D S Sbjct: 292 --GRPIGVK-ISAGHIEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS-------- 340 Query: 241 WGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-- 294 IPT +L AR Y + + + +GGLR D K+I +GA +AS L A Sbjct: 341 --IPTIFALYRARKYIDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAAAC 398 Query: 295 ----------------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +S++ V + +E + G K + + Sbjct: 399 QQYRICGSGKCPVGVATQDEELRKRLHIENSANRVANFLNVSLEELKTFARISGHKDIHD 458 Query: 327 LYLNTA 332 L ++ Sbjct: 459 LSVDDL 464 >gi|54022187|ref|YP_116429.1| putative dehydrogenase [Nocardia farcinica IFM 10152] gi|54013695|dbj|BAD55065.1| putative dehydrogenase [Nocardia farcinica IFM 10152] Length = 391 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 122/356 (34%), Gaps = 58/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPE-ISFDEVDPSVEFLGKKLSFPLLISS------MT 65 N+ FD + ++ R L D S E LG +L+ P+L + M Sbjct: 50 ASSGRTAAANRAAFDRYRIVPRMLRGATGPGNRDLSTEVLGTRLAAPVLTAPIGVLELMR 109 Query: 66 GGNNKMIERINRNL--------AIAAEKTKVAMAVGSQRVMF---SDHNAIKSFELR-QY 113 G + + + L A ++ +V A G +DH+ +SF R + Sbjct: 110 PGGEVTVAEVTKELGIGSVLSTASSSTIEEVGAAAGDWWYQLYWPADHDLARSFVERAER 169 Query: 114 APHTVLISNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHL------NPLQE------ 158 A ++ + L + D + V A+ L + +P +E Sbjct: 170 AGAKAIMVTVDTPSLGWRPQDLELAHLPFLVGKGIANYLSDPVFRAKLPSPPEESEDAMR 229 Query: 159 ---IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + N + IA L D+P+ +K + L D + +G ++ Sbjct: 230 IAILTWVGLFGNHTLRPADIARLREWTDLPIAVKGI---LHPDDARAVIDAGADGVVVSN 286 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG R +++ I + +P +S + A + G+R G D+L Sbjct: 287 HGG---------RQVDNSIAALDA---LPAVVS-----AIGDRADVLFDSGIRTGSDVLV 329 Query: 276 SIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ LGA P+ + V A+ L +F +M L G L + Sbjct: 330 ALSLGAKAVLFGRPYAYGLGIAGRAGVHHALRLLLADFDSAMGLCGCTSAAALDRS 385 >gi|313110720|ref|ZP_07796581.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 39016] gi|310883083|gb|EFQ41677.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 39016] Length = 383 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 109/364 (29%), Gaps = 77/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + N+ F L R + + LG++++ P++I+ TG G Sbjct: 32 SEGTYRANQDDFAAIKLRQRV--ARNIENRSLRTRMLGQEMAMPVVIAP-TGLAGMQHAD 88 Query: 73 ERINRNLAIAAEKTKV-----AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 I A AA + V M++ S + ++ F+L R + + + Sbjct: 89 GEILA--ARAAAEFGVRYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIDRAK 146 Query: 123 L-GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 G L +Q Q L A+ L + P + Sbjct: 147 AAGCDALVLTLDLQIIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFG 206 Query: 171 -----------------LSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +++ + + L+LK + L + D L Sbjct: 207 NIVGHVKGVDDMGSLSEWTARQFDPRLNWGDVEWIKRLWGGKLVLKGI---LDAEDARLA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I + Sbjct: 264 ADSGADALVVSNHGGRQLDGAPSTISALPAI-----------------VEAVGERIEVWL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+LK+I LGA + P+L V A+E + +E ++M G Sbjct: 307 DSGIRSGQDVLKAIALGARGTMIGRPYLYGLGALGQAGVTRALEIIARELDLTMAFCGHT 366 Query: 323 RVQE 326 ++E Sbjct: 367 DIRE 370 >gi|254776913|ref|ZP_05218429.1| FMN-dependent dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 408 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIAWLREVWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAIAE-----------------AVGDQIEVLLDGGVRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG V +L + L+ Sbjct: 337 WGLAAAGQAGVENVLDILRGGIDSALMGLGHSSVHDLGPSDILV 380 >gi|121706688|ref|XP_001271596.1| L-lactate dehydrogenase [Aspergillus clavatus NRRL 1] gi|119399744|gb|EAW10170.1| L-lactate dehydrogenase [Aspergillus clavatus NRRL 1] Length = 420 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 102/362 (28%), Gaps = 81/362 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F ++ R L + + D + E G K+S P+ + + G NK+ + Sbjct: 71 ANRQAFYRHRIVPRQLVDTNLR--DTTTEIFGHKVSAPIGFAPI--GINKIYNPAAEIPV 126 Query: 80 AIAAEKTKVAMAV---GSQRVM-------------------------------------- 98 A A + + + GS + Sbjct: 127 AKVAHELNLPYCLSTAGSTSIEQVGAANGTGPRFFQLYLPHDDELTLSLLTRAWTSGFDA 186 Query: 99 --FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLN 154 + + A L V ++ +A + D + + Sbjct: 187 LILTTDTWQLGWRHDDVANSNYAFYRGVGADLGLSDPVFRRRCAEAGIDVEKDPVAASVK 246 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIR 209 + I A I L P ++K + S D ++ G+ Sbjct: 247 WIDSIWHGR-----AWSWETIPWLIEKWKALSGGRPFVIKGIQ---SVADARKCVEYGVD 298 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + D I ++ + G+R Sbjct: 299 GIVVSNHAGRQVDGAIASLDALESI-----------------VDAVGDQIYVMFDSGVRG 341 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 D++K++ LGA + ++ + V ++SL +F + M + G V++ Sbjct: 342 ASDVVKALALGAEFVFVGRLWVWGLSIMGEEGVRHVMKSLLADFDILMAVGGFTSVKDFD 401 Query: 329 LN 330 Sbjct: 402 RT 403 >gi|119485002|ref|XP_001262143.1| FMN dependent dehydrogenase, putative [Neosartorya fischeri NRRL 181] gi|119410299|gb|EAW20246.1| FMN dependent dehydrogenase, putative [Neosartorya fischeri NRRL 181] Length = 399 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 21/169 (12%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I L + D P++LK + S D ++ G++ ++ GG Sbjct: 249 SHSWEEIGFLQAHWDGPIVLKGIQ---SVADARRAVEVGVQGIVVSNHGGRQQDGGIGSL 305 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ +I + + + G+R G D+ K++ LGA + + Sbjct: 306 DVLPEI-----------------VDAVGDRLEVLFDSGVRGGADVAKALALGAKMVLIGR 348 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P+ A+ V + S+ + +++ L G K V +LN +++R Sbjct: 349 PYAYGLAIAGEAGVSHVLRSILADLELTLHLGGIKSVSPEHLNRSVLRR 397 >gi|83952262|ref|ZP_00960994.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius nubinhibens ISM] gi|83837268|gb|EAP76565.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius nubinhibens ISM] Length = 379 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 69/364 (18%), Positives = 113/364 (31%), Gaps = 82/364 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + RN++ F L+ L D + LG+ P+ I+ M+G E Sbjct: 36 EATCRRNEEVFAGLRLMPSLLHGEQT--PDLTTRLLGQAYQMPVGIAPVGMSGLIWPDAE 93 Query: 74 RINRNLAIAAEKTKVA---MAVGSQRVMFSDHNAIKS--F--------ELRQYAPHTVLI 120 +LA AA + V SQ + + F E+RQ Sbjct: 94 ---GHLARAATAAGLPYTLSTVASQTPEAVAPHLAGNGWFQLYPPRDPEIRQDMLRRARA 150 Query: 121 SNLGAVQLNYDFGVQ---------------------KAHQAVHVLGADGLFLHLNP---- 155 + + L D V A A+ A G+ H P Sbjct: 151 AGFTTLVLTVDVPVASRRERQLRSGLTQPPRLSPRLLAQVAIRPAWALGMARHGMPRMAL 210 Query: 156 LQEIIQPN-----------GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + +P D ++ L A PL++K V L + + Sbjct: 211 IDDYSRPEKGLSSTAHAGYLLRTSPDWDY-LSWLRDAWQGPLVVKGV---LDPDTVPRLM 266 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G+ ++ GG + P PL + A + I Sbjct: 267 AAGVDALWLSNHGGRQFDAA-------------------PAPLEVLPAIRAATDLPLIVD 307 Query: 265 GGLRNGVDILKSIILGAS--LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+ G+DIL+++ LGA + G A F A+ + LR + +M LG Sbjct: 308 SGISGGLDILRALALGADFTMLGRAWHFALAAL-GAQGPAHLARILRLDLESNMGQLGLI 366 Query: 323 RVQE 326 R E Sbjct: 367 RPSE 370 >gi|67528446|ref|XP_662025.1| hypothetical protein AN4421.2 [Aspergillus nidulans FGSC A4] gi|40741148|gb|EAA60338.1| hypothetical protein AN4421.2 [Aspergillus nidulans FGSC A4] gi|259482765|tpe|CBF77557.1| TPA: L-lactate dehydrogenase (AFU_orthologue; AFUA_4G07050) [Aspergillus nidulans FGSC A4] Length = 458 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 101/363 (27%), Gaps = 82/363 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F +I L + + D + G +S P+ + + G NK+ + Sbjct: 108 ANRQAFYRHRIIPNQLVDTNLR--DTTTTIFGHTVSAPIGFAPI--GINKIYHPSAELAV 163 Query: 80 AIAAEKTKVAMAVGSQR------------------------------------------- 96 A A + + + + Sbjct: 164 AKVAGELNLPYCLSTAGSTPIEKVGEANGPGNPRFYQLYMPHDDELTVSLLKRAWDSGFD 223 Query: 97 -VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHL 153 VM + + A L V ++ +A D + Sbjct: 224 AVMLTTDTWQLGWRHDDVANSNYAFYRGLGADLGLTDPVFQKRCREAGIDPEKDVVAAST 283 Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGI 208 + + A KI L P +K + S D + ++ G+ Sbjct: 284 KWIDSVWHGR-----AWTWEKIPWLIKTWKEISGGRPFAIKGIQ---SVPDAKKCVELGV 335 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ G + D +I A ++ + G+R Sbjct: 336 DGIVVSNHAGRQVDGAIASLDALENI-----------------ANAVGDQIYIMYDSGVR 378 Query: 269 NGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D+ K++ LGA + ++ + V ++SL +F + M + G K V++ Sbjct: 379 GASDVGKALALGAKFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDILMAVGGFKSVKDF 438 Query: 328 YLN 330 + Sbjct: 439 DRS 441 >gi|15597578|ref|NP_251072.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PAO1] gi|107101826|ref|ZP_01365744.1| hypothetical protein PaerPA_01002871 [Pseudomonas aeruginosa PACS2] gi|116050323|ref|YP_790860.1| L-lactate dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|218891642|ref|YP_002440509.1| L-lactate dehydrogenase [Pseudomonas aeruginosa LESB58] gi|254235387|ref|ZP_04928710.1| L-lactate dehydrogenase [Pseudomonas aeruginosa C3719] gi|254240815|ref|ZP_04934137.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 2192] gi|9948422|gb|AAG05770.1|AE004664_7 L-lactate dehydrogenase [Pseudomonas aeruginosa PAO1] gi|115585544|gb|ABJ11559.1| L-lactate dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167318|gb|EAZ52829.1| L-lactate dehydrogenase [Pseudomonas aeruginosa C3719] gi|126194193|gb|EAZ58256.1| L-lactate dehydrogenase [Pseudomonas aeruginosa 2192] gi|218771868|emb|CAW27647.1| L-lactate dehydrogenase [Pseudomonas aeruginosa LESB58] Length = 383 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 108/364 (29%), Gaps = 77/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + N+ F L R + + LG++++ P+ I+ TG G Sbjct: 32 SEGTYRANQDDFAAIKLRQRV--ARNIENRSLRTRMLGQEMAMPVAIAP-TGLAGMQHAD 88 Query: 73 ERINRNLAIAAEKTKV-----AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 I A AA + V M++ S + ++ F+L R + + + Sbjct: 89 GEILA--ARAAAEFGVRYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIDRAK 146 Query: 123 L-GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 G L +Q Q L A+ L + P + Sbjct: 147 AAGCDALVLTLDLQIIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFG 206 Query: 171 -----------------LSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +++ + + L+LK + L + D L Sbjct: 207 NIVGHVKGVDDMGSLSEWTARQFDPRLNWGDVEWIKRRWGGKLVLKGI---LDAEDARLA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I + Sbjct: 264 ADSGADALVVSNHGGRQLDGAPSTISALPAI-----------------VEAVGERIEVWL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+LK+I LGA + P+L V A+E + +E ++M G Sbjct: 307 DSGIRSGQDVLKAIALGARGTMIGRPYLYGLGALGQAGVTRALEIIARELDLTMAFCGHT 366 Query: 323 RVQE 326 ++E Sbjct: 367 DIRE 370 >gi|254822793|ref|ZP_05227794.1| LldD1 [Mycobacterium intracellulare ATCC 13950] Length = 395 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 237 WEDIAWLRELWGGPFMLKGV---IRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I ++ + + GG+R G D++K++ LGA + +L Sbjct: 294 PAIAA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG + +L L+ Sbjct: 337 WGLAAAGQPGVENVLDILRGGIDSALMGLGHSSIHDLGPGDILV 380 >gi|299743245|ref|XP_001835630.2| oxidoreductase [Coprinopsis cinerea okayama7#130] gi|298405569|gb|EAU86201.2| oxidoreductase [Coprinopsis cinerea okayama7#130] Length = 435 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 23/220 (10%) Query: 116 HTVLISNLGA-----VQLNYDFGVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGNTNFA 169 V + LG + + +K +A A +HL E ++ + + Sbjct: 220 DPVFMGRLGKQPITESNVKFPHDTEKLDKAFEEGDGAVREMVHL--GIEWMKEANSGIYR 277 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 +A L + P++LK + S D E L G+ ++ GG Sbjct: 278 TWED-LAFLRENWEGPIVLKGIQ---SVDDAEKALNYGVDGILVSNHGGRQVDGAIPSLY 333 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 +I SL + + G+R G DI+K+I LGA L P Sbjct: 334 ALENIMKS----------SLVREAQASGKITILFDSGIRTGSDIIKAIALGAQGVLLGRP 383 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 ++ + V I+ + S+ L G K + E+ Sbjct: 384 YVYGSVLAGQAGVEQVIKHTLADLDTSLGLSGYKNLNEIQ 423 >gi|291007928|ref|ZP_06565901.1| isopentenyl-diphosphate delta-isomerase II 2 [Saccharopolyspora erythraea NRRL 2338] Length = 394 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 100/335 (29%), Gaps = 86/335 (25%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N++ FD W L+ R L + D +V G++L+ P+L++ + + + LA Sbjct: 52 ANRQAFDQWRLVPRMLRGATRR--DLTVSLFGQRLAAPVLLAPIA---AQTVVHPEGELA 106 Query: 81 IA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A V + + + A + ++ QL + Sbjct: 107 AVRGAADAGVPFVLSTGASHPLEDVAAAAGGQPRWF------------QLYWPAHRAVCE 154 Query: 139 QAVHVLGAD---GLFLHLNPLQEIIQPNG-------------------NTNFADLS---- 172 V A L L ++ +P + F Sbjct: 155 SLVRRAEASGYSALVLTVDSPSFGYRPADLDNGYLPFLNGAGIANFVSDPEFQGGLPSDA 214 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + L S +P+++K V L + D ++ G Sbjct: 215 GEREVVEHWARVFANPGLTWDDLPWLRSLTGLPIVIKGV---LHADDARRAVELGADGLV 271 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + D +P + + + G+R G D Sbjct: 272 VSNHGGRQLDGSVASLDA------------LPAVRA-----AVGDGVPVLLDSGVRTGSD 314 Query: 273 ILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIE 306 ++K++ LGA P++ A+D + V + Sbjct: 315 VVKALALGADAVLYGRPYVYGLALDGQEGVSHVLR 349 >gi|119467314|ref|XP_001257463.1| oxidoreductase [Neosartorya fischeri NRRL 181] gi|119405615|gb|EAW15566.1| oxidoreductase [Neosartorya fischeri NRRL 181] Length = 403 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 113/366 (30%), Gaps = 85/366 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM 71 + +D N+ F W L+ R + P D +V G++ P+L++ + G + Sbjct: 52 AGEKATMDANRLAFRQWKLVPRMMKP---MANQDLTVNLFGQEYPTPILMAPV-GVQSLF 107 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 E LA + V + S ++ E+ + L Q + D Sbjct: 108 HEDKETGLAEVCAEVGVP-------YILSTASSSTIEEVAEANGDGKRWYQLYWPQ-DDD 159 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN------------------------ 167 + +A G L + L+ +P N Sbjct: 160 VTMSLLKRAKEN-GFSVLVVTLDTWSLAWRPADLDNAYVPFITGVGNQIGFSDPVFRAKF 218 Query: 168 -----------------------FAD---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 F+ +IA L D P++LK + D Sbjct: 219 EKDKGSKVEEDIVGASRAWIGDVFSGKPHTWEQIAFLRKNWDGPIVLKGIQHA---EDAR 275 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L LK+G ++ GG D+ +I ++ Sbjct: 276 LALKAGCDGIIVSNHGGRQVDGAIGSLDVLPEI-----------------VDAVGDKMTV 318 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R G DI+K++ LGA ++ P + A+D ++ + + ++ L G Sbjct: 319 LFDSGIRTGADIIKALCLGAKAVLVSRPVIYGLAVDGKQGAKQVMKGILADLWGTLGLAG 378 Query: 321 TKRVQE 326 + E Sbjct: 379 ICGIAE 384 >gi|307244023|ref|ZP_07526142.1| dehydrogenase, FMN-dependent [Peptostreptococcus stomatis DSM 17678] gi|306492547|gb|EFM64581.1| dehydrogenase, FMN-dependent [Peptostreptococcus stomatis DSM 17678] Length = 314 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 98/312 (31%), Gaps = 45/312 (14%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNKMIERINRN 78 N+ + D + R I E D S E G+K S P+++ + + K ++ Sbjct: 28 HNRNYLDSILVEMRV---IDSVEPDLSTEIFGRKYSSPIMMPAFSHLNKVGKDGKKPMVE 84 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A AA+ + VG E + + + ++ + + Sbjct: 85 YAKAAKDMGLLNWVG----------MEPDDEYEEISQVGADTIRIIKPFADHQIILDQID 134 Query: 139 QAVHVLGADGLFLHLN--PLQE--IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 A GA + + ++ P + +G + + +P + K V Sbjct: 135 FA-KKTGAVAVGVDIDHVPGTDGKYDVVDGYPMGPVMEEDLKKYVDHAGIPFVAKGV--- 190 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS D +G + ++ G I +GIP + L Sbjct: 191 LSVQDAIKARNAGCQAIVVSHHHGR----IP---------------FGIPPIMVLPEIVD 231 Query: 255 YCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKE 311 + G D K++ LGA + L P + D D VV +E + +E Sbjct: 232 ALKGSGVTIFCDCSMDTGYDAYKALALGAHAVSVGRGILGPLLSDGRDGVVTKLERMNEE 291 Query: 312 FIVSMFLLGTKR 323 M G K Sbjct: 292 LSEMMMYTGIKD 303 >gi|163738529|ref|ZP_02145944.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Phaeobacter gallaeciensis BS107] gi|161388450|gb|EDQ12804.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Phaeobacter gallaeciensis BS107] Length = 363 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 97/355 (27%), Gaps = 66/355 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G RN+ D L R L + + G + P I+ M G N Sbjct: 32 AGQETGAARNRAALDAITLRPRIL--RDVSQRSLATSIFGAETDRPFGIAPM-GMCNLAA 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A +V V + ++ F+L ++ L Sbjct: 89 PGADLMLARLAAHHRVPHGVSTVASTPLEILLEAAEGYAWFQL-YFSGDGTGTFKLAERA 147 Query: 124 ---GAVQLNYDFGVQKAHQAVHVL-------------GADGLFLH----------LNPLQ 157 G L V + + L LH P+ Sbjct: 148 RAAGYQTLVLTVDVPEVGRRPRELRHGFKMPFRIGPRQFIDFALHPRWSLATLLKGKPVM 207 Query: 158 EIIQPNG------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + G + +A L L++K V L D + +G Sbjct: 208 ANFEMEGYDFDRTESRARATWDTLARLRDLWPGKLVVKGV---LDVEDARALVSAGADAI 264 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 I+ G + ++ + I F G+R+G Sbjct: 265 QISSHGARQLEAAPAPIEMLAKIRADF-----------------GPTFPVFYDSGIRSGE 307 Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 D+LK+I GA L A + ++L +E ++M G + Sbjct: 308 DVLKAITTGADFVFLGRILQYAIAARGEAGLEQLWDALSEELSIAMAQTGRVSLA 362 >gi|307728017|ref|YP_003911230.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1003] gi|307588542|gb|ADN61939.1| (S)-mandelate dehydrogenase [Burkholderia sp. CCGE1003] Length = 389 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 52/157 (33%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S +A L LL+K V S+ D L K I ++ GG S D+ Sbjct: 234 WSDLAWLRRHWPGKLLVKGVQ---SAQDALLASKYDIDGAVLSNHGGRQLDGAPSAIDVL 290 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + GG+R G DI K++ LGA L L Sbjct: 291 AETAP-----------------QMRRDFDLFIDGGVRRGSDIAKAVALGARGVLLGRAPL 333 Query: 292 KPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V + L E + + L+G R+ L Sbjct: 334 YGLAGGGRKGVDHVLALLENELHICLRLIGCPRIDAL 370 >gi|315937154|gb|ADU56161.1| hypothetical protein CA915-40 [uncultured organism CA915] Length = 388 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + +PL+LK + L+ D ++ G+ ++ GG + Sbjct: 217 WSAVDRIRQMTRLPLVLKGL---LAPEDAAQAVEYGVDAIVVSNHGGRQLDGAVTSITAL 273 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 +I V D + + G+R G D+L+++ LGAS + P Sbjct: 274 PEIAAVVGD-----------------GCEILLDSGIRTGTDVLRALALGASGVLIGRPMM 316 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 A+ +E L E +M L G V Sbjct: 317 WGLAVAGERGATRVLEILAAELRDAMGLAGCTDVA 351 >gi|121610119|ref|YP_997926.1| L-lactate dehydrogenase (cytochrome) [Verminephrobacter eiseniae EF01-2] gi|121554759|gb|ABM58908.1| L-lactate dehydrogenase (cytochrome) [Verminephrobacter eiseniae EF01-2] Length = 414 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 106/365 (29%), Gaps = 82/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R ++ + +G+ ++ P+ I+ TG G Sbjct: 63 EGTYRANEADFQAIKLRQRV--AVNMEGRSTRTTMVGQDVAMPVAIAP-TGLTGMQHADG 119 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FEL-----RQYAPHTV---L 119 I A AA+ + + + + + A + F++ R + + Sbjct: 120 EILG--AKAAKAFGIPFTLSTMSICSIEDIAEHTGRHPFWFQVYVMRDRDFIERLIDRAK 177 Query: 120 ISNLGAVQLNYDF--------GVQKAHQAVHVLG-ADGLFLHLNP--------------- 155 +N A+QL D ++ A A+ + L P Sbjct: 178 AANCSALQLTLDLQILGQRHKDIKNGLSAPPRPSLANLIDLATKPRWCWGMLGTPRRSFG 237 Query: 156 --------------LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L + + + L+LK + + + D Sbjct: 238 NIVGHAKDVGDLSSLSAWTAEQFDPRLHWGD--VEWIKKRWGGKLILKGI---MDAEDAR 292 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L + SG ++ GG S I + Sbjct: 293 LAVNSGADALIVSNHGGRQLDGAPSSIAALPGIAA-----------------AAGKAIEV 335 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 GG+R+G D+LK+ LGA + FL V A+E + KE ++M G Sbjct: 336 WMDGGIRSGQDVLKARALGAQGTLIGRSFLYGLGAFGQAGVTRALEIIHKELDITMAFCG 395 Query: 321 TKRVQ 325 + Sbjct: 396 LTDIN 400 >gi|88854634|ref|ZP_01129301.1| putative l-lactate dehydrogenase [marine actinobacterium PHSC20C1] gi|88816442|gb|EAR26297.1| putative l-lactate dehydrogenase [marine actinobacterium PHSC20C1] Length = 410 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 107/367 (29%), Gaps = 82/367 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + + R ++ F+D L VD + + LG + P I+ Sbjct: 59 AEGELSLSRARQAFEDIEFHPSIL--RDASNVDTTTQILGGTSAMPFGIAPTGFTRLMQT 116 Query: 65 --------------------TGGNN-----KMIER---------------INRNLAIAAE 84 T G + K I+ L A Sbjct: 117 EGEIAGAGAAAAAGIPFTLSTLGTSSIEDVKAANPEGRNWFQLYVMRDRDISYGLVERAA 176 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 + V + + F + +++ + +DF Sbjct: 177 AAGFDTLMFTVDTPVAGARLRDKRNGFSIPPQLTVGTIMNAIPRPWWWFDF------LTT 230 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L L + E++ + + + + ++ +++K V + D + Sbjct: 231 PPLEFASLASTGGTVGELL--DSAMDPSIDYHDLTIIRDMWPGKIVIKGVQ---NLEDSK 285 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ ++ GG R L ++ R N+ + Sbjct: 286 RLADLGVDSILLSNHGGRQLDRAPIPFHLLPNV-----------------VREVGNDVEV 328 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 + G+ NG DI+ S+ LGA + +L M + V IE L ++ I +M LL Sbjct: 329 MVDTGIMNGADIVASMALGAKFTLIGRAYLYGLMAGGREGVDRTIEILSEQVIRTMKLLE 388 Query: 321 TKRVQEL 327 ++EL Sbjct: 389 VTSIEEL 395 >gi|225012251|ref|ZP_03702688.1| L-lactate dehydrogenase (cytochrome) [Flavobacteria bacterium MS024-2A] gi|225003806|gb|EEG41779.1| L-lactate dehydrogenase (cytochrome) [Flavobacteria bacterium MS024-2A] Length = 382 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 109/366 (29%), Gaps = 77/366 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D + +N LI L S +VD G+ P ++ + Sbjct: 35 CNDDINLKKNTSDIRAVELIPNYLK--SKVQVDLKTTLFGETYDAPFGVAPIGLQGLMWP 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF-----SDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + LA AA+K + + + F+L A + +L Sbjct: 93 KAP-EILAHAAKKQNLPFVLSTVTTSSIEKIGKISEGKAWFQLYHPAKKE-VRDDLIERA 150 Query: 128 LNYDFGVQKAHQAVHVLGA------DGLFLH-----LNPLQEIIQPN--------GNTNF 168 N + V V G +GL + N +Q + +P G F Sbjct: 151 SNAGYPVLVLLSDVPTFGFRPRDIRNGLAMPPKMSIYNFIQILKRPEWALKTLMNGQPQF 210 Query: 169 ADLS--------------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L KI + ++LK V SS D+E Sbjct: 211 ESLLPYMPKGLNLNQLGKFMDATFDGRLNEEKIKPIRDLWKGKIVLKGVA---SSADMEK 267 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-RPYCNEAQF 261 + GI I+ GG G T +L+ + Y ++ Sbjct: 268 AISLGIDGVIISNHGGRQLDA------------------GQSTLHALQSLNKKYEDKITI 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLG 320 + GLR+G D+ +++ GA + F+ S +E ++ E M +G Sbjct: 310 MMDSGLRSGPDVARTLASGAKFTFMGRSFMYGVGALGSQGGEHTMELIKTELRQVMDQIG 369 Query: 321 TKRVQE 326 ++ + Sbjct: 370 CEKTSD 375 >gi|219556544|ref|ZP_03535620.1| L-lactate dehydrogenase (cytochrome) lldD1 [Mycobacterium tuberculosis T17] Length = 221 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L P +LK V + D + + +G+ ++ GG + + Sbjct: 62 WEDIGWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 118 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 119 PAVSA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 161 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A + V ++ LR ++ LG V +L L+ Sbjct: 162 WGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILV 205 >gi|254776177|ref|ZP_05217693.1| lactate 2-monooxygenase [Mycobacterium avium subsp. avium ATCC 25291] Length = 303 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 22/162 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L S D+PL++K + D G+ + GG Sbjct: 159 WDDLPWLRSLTDLPLIIKGICH---PDDARRARDGGVDGIYCSTHGGRQ----------- 204 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P L + + G+R+G D++K++ LGA+ G+ P+ Sbjct: 205 -------ANGGLPALDCLPGVVEAADGLPVLFDSGIRSGADVVKALALGATAVGIGRPYA 257 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ D +V + S+ E + M + G ++L +T Sbjct: 258 YGLALGGVDGIVHVLRSILAEADLIMAVDGYPTRKDLTPDTL 299 >gi|227904509|ref|ZP_04022314.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus acidophilus ATCC 4796] gi|227867718|gb|EEJ75139.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Lactobacillus acidophilus ATCC 4796] Length = 304 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 56/324 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D N+ + D + R I E D + GKK + PL+ + Sbjct: 9 ADDANVHNRHYLDRLLVEMRV---IDAVEPDLTTTIFGKKYASPLM--------PAALSH 57 Query: 75 INRNL-----------AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQYAPHTVLISN 122 +N+ L AIAA + + +G + +S+ A +R P Sbjct: 58 LNKILDDKNRKPMQEKAIAARELNLLNWIGMETNEEYSEIVAEGGDTIRIIKPFADPQKI 117 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 +G ++ D G + + + N +++ +G + + +++ Sbjct: 118 MGEIKFAEDHGAVAVGIDIDHIAGE------NGKYDVV--DGIPLGSIRMDDLKKYAAST 169 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 ++P + K V LS D ++G + ++ G +G Sbjct: 170 ELPFIAKGV---LSVADALKARQAGCKAIVVSHHHGRV-------------------PFG 207 Query: 243 IPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSD 299 IP L + + Q G L +G D K++ LGA + L + + ++ Sbjct: 208 IPPLSILPEIKKALIGSGMQIFVDGSLMSGYDAYKALALGADAVLIGRGILPEVLKNGTE 267 Query: 300 AVVAAIESLRKEFIVSMFLLGTKR 323 A ++ + ++ M G K Sbjct: 268 ATKNKLQKMNEQLSEMMLYTGIKD 291 >gi|134099175|ref|YP_001104836.1| isopentenyl-diphosphate delta-isomerase II 2 [Saccharopolyspora erythraea NRRL 2338] gi|133911798|emb|CAM01911.1| isopentenyl-diphosphate delta-isomerase II 2 [Saccharopolyspora erythraea NRRL 2338] Length = 401 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 100/335 (29%), Gaps = 86/335 (25%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N++ FD W L+ R L + D +V G++L+ P+L++ + + + LA Sbjct: 59 ANRQAFDQWRLVPRMLRGATRR--DLTVSLFGQRLAAPVLLAPIA---AQTVVHPEGELA 113 Query: 81 IA--AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A V + + + A + ++ QL + Sbjct: 114 AVRGAADAGVPFVLSTGASHPLEDVAAAAGGQPRWF------------QLYWPAHRAVCE 161 Query: 139 QAVHVLGAD---GLFLHLNPLQEIIQPNG-------------------NTNFADLS---- 172 V A L L ++ +P + F Sbjct: 162 SLVRRAEASGYSALVLTVDSPSFGYRPADLDNGYLPFLNGAGIANFVSDPEFQGGLPSDA 221 Query: 173 --------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + L S +P+++K V L + D ++ G Sbjct: 222 GEREVVEHWARVFANPGLTWDDLPWLRSLTGLPIVIKGV---LHADDARRAVELGADGLV 278 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG + D +P + + + G+R G D Sbjct: 279 VSNHGGRQLDGSVASLDA------------LPAVRA-----AVGDGVPVLLDSGVRTGSD 321 Query: 273 ILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIE 306 ++K++ LGA P++ A+D + V + Sbjct: 322 VVKALALGADAVLYGRPYVYGLALDGQEGVSHVLR 356 >gi|256392449|ref|YP_003114013.1| (S)-2-hydroxy-acid oxidase [Catenulispora acidiphila DSM 44928] gi|256358675|gb|ACU72172.1| (S)-2-hydroxy-acid oxidase [Catenulispora acidiphila DSM 44928] Length = 678 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 112/344 (32%), Gaps = 64/344 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F + RAL + D LG L PL ++ ++++ Sbjct: 340 ADTERTVTANRRAFARAEIRPRALVDTEVC--DTRTAILGSTLGTPLAVAPTA--YHRLV 395 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM----FSDHNAIKS-------FELRQYAPHTVLIS 121 A+ A A+ + + D A S + LRQ LI Sbjct: 396 HP--EGEVATAQGAGAADALYTVSIFASRTLEDIAASASGPLWLQLYWLRQREAMVTLID 453 Query: 122 N-----LGAVQLNYDFGVQKAHQAVHV-----LGADGLFLHLNPL-------------QE 158 A+ L D + + + +G D ++L+ Sbjct: 454 RAAAAGYRALVLTVDIP-RMGRRLRDMRNGFAVGPDCAAVNLDAALMASAHLRGAGKSAL 512 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + +A L D+PL+LK + L++ D L + G ++ GG Sbjct: 513 AVHTAQTIDPSVTWADLAWLRERSDLPLVLKGI---LTAEDARLAVSYGADAIIVSNHGG 569 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSI 277 +P+ +L E+ + GG+R+G D ++ Sbjct: 570 RQLDGA------------------VPSLTALPEVVAAVAGACPVMVDGGVRSGGDAFAAL 611 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLLG 320 LGA L P L A VA + L E +M L G Sbjct: 612 ALGAQAVFLGRPVLWGLAVGGAAGVAGLLDLATGELAHTMALAG 655 >gi|294818093|ref|ZP_06776735.1| Isopentenyl-diphosphate delta-isomerase II 2 [Streptomyces clavuligerus ATCC 27064] gi|294322908|gb|EFG05043.1| Isopentenyl-diphosphate delta-isomerase II 2 [Streptomyces clavuligerus ATCC 27064] Length = 398 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 23/162 (14%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A L S +P+L+K V + + +G ++ GG Sbjct: 252 EDLATLKSWTHLPVLVKGV---CDPGEARCLVDAGADGIAVSNHGGRQLDS--------- 299 Query: 233 DIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G+ L +A + G+R G D+L ++ LGA + P+L Sbjct: 300 ---------GVAALDCLPAVAAAVSGRVPLLFDSGIRTGTDVLIALALGADAVMIGRPWL 350 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ +D V + L+ EF ++ L G L + Sbjct: 351 YGLALGGADGVAHVLRCLKDEFTSALTLTGHHTCATLSPSDL 392 >gi|254454081|ref|ZP_05067518.1| L-lactate dehydrogenase [Octadecabacter antarcticus 238] gi|198268487|gb|EDY92757.1| L-lactate dehydrogenase [Octadecabacter antarcticus 238] Length = 387 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 106/370 (28%), Gaps = 73/370 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N FD R + + + +G+ ++ P+ ++ + G Sbjct: 32 SEQTFRENTSDFDKIRFRQRI--AVDMTNRTTASQMIGQDVAMPVALAPV-GLTGMQCAD 88 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSD---HNAIKSFELRQYAPHTVLISNLGAV 126 A AAEK V M++ S + + + + L+ L A Sbjct: 89 GEIKAAKAAEKFGVPFTLSTMSICSIEDVAENTTKPFWFQVYTLKDDDFMQRLFDRAKAA 148 Query: 127 QLNY-------------DFGVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGNTNFADL- 171 + + ++ A L L + F Sbjct: 149 KCSAIVITLDLQILGQRHKDLKNGLTAPPKFTIPTMLNLATKWTWGLQMLQTKRRFFGNI 208 Query: 172 --------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 ++A L P++LK + L D + + Sbjct: 209 VGHAKEVSDPSSLASWSAEAFDHSLNWDRVAQLMKMWGGPVILKGI---LDVDDAKKAAE 265 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++ GG S + I + + Sbjct: 266 LGADAIIVSNHGGRQLDGALSSIRMLEQI-----------------VDAVGDLVEVHFDS 308 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G D+LK++ LGA + F+ +A V A++ + E ++M G + + Sbjct: 309 GIRSGQDVLKALALGAKGTYIGRAFVNGLGAMGEAGVTKALDVIHSELDLTMAFCGHRDI 368 Query: 325 QELYLNTALI 334 + + N L+ Sbjct: 369 KSVDKNILLV 378 >gi|229591054|ref|YP_002873173.1| L-lactate dehydrogenase [Pseudomonas fluorescens SBW25] gi|229362920|emb|CAY49837.1| L-lactate dehydrogenase [Pseudomonas fluorescens SBW25] Length = 386 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L++K + L D L SG ++ GG S Sbjct: 235 WDDVAWIKQCWGGKLIIKGI---LDVEDARLAANSGADALVVSNHGGRQLDGAPSSISQL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GG+R+G D+LK++ LGA + L Sbjct: 292 PAI-----------------VEAVGERIEVWLDGGIRSGQDVLKAMALGAKGTMIGRAHL 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 +A V A++ + +E VSM L G +++ Sbjct: 335 YGLGAMGEAGVTKALQIIARELDVSMALCGYNDIRD 370 >gi|298293332|ref|YP_003695271.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] gi|296929843|gb|ADH90652.1| L-lactate dehydrogenase (cytochrome) [Starkeya novella DSM 506] Length = 381 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 115/361 (31%), Gaps = 69/361 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM------TGGNN 69 + + N+ F W L+ R L ++S D + FLG P ++ + GG Sbjct: 32 EETLHANRADFARWTLVQRVLNDVSTR--DLATRFLGADHPLPFMLGPVGFLGLYAGGGE 89 Query: 70 KMIERIN--------------RNLAIAAEKTK--VAMAVGSQRVMFSDHNAIKSFELRQY 113 + +LA + T +A + + + R+ Sbjct: 90 IAAAKAAHAAGIPLCLSTFSIASLAKLRQATTGPLAFQLYVMSDRAIGDELLA--QAREA 147 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVL----GADGLFLHL--NPLQEIIQPNG--- 164 T+ ++ + + V+ +++ + GA + L + P Sbjct: 148 GVDTLFLTVDTTITSVRERDVRNGFRSLTRISPGLGARLMTRPLWCFDMLRAGMPEVGAV 207 Query: 165 --NTNF-ADLSSKIALLSSAMDVPLLLKEV-------------GCGLSSMDIELGLKSGI 208 F + + + LS +D L ++V LS D +G Sbjct: 208 AHRPEFGKGVLEQASHLSRRIDTRLSWRDVDALRARWPGRLVLKGILSPEDALTARAAGA 267 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG S GI + + GG+R Sbjct: 268 DAIVVSNHGGRQLDGTSSTIAALP---------GI--------VDATEGGIEVLFDGGIR 310 Query: 269 NGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G DI+K++ LGAS L ++ A V + L +E +++ L+G + + EL Sbjct: 311 RGADIVKALALGASGVLLGRAYVYGLAAAGEAGVARILAHLTEEVSLTLGLMGMRSIDEL 370 Query: 328 Y 328 Sbjct: 371 K 371 >gi|154322401|ref|XP_001560515.1| hypothetical protein BC1G_00543 [Botryotinia fuckeliana B05.10] gi|150847877|gb|EDN23070.1| hypothetical protein BC1G_00543 [Botryotinia fuckeliana B05.10] Length = 421 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 116/359 (32%), Gaps = 73/359 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F +I R L + + D E G K+S P+ + + G NK+ + + Sbjct: 71 ANRQAFYRHRIIPRML--VDTNNRDTKTEIFGHKVSAPIGFAPI--GINKIYNPLAELPV 126 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQ---YAPHTVLISNLGAVQLNYDFGV- 134 A A++ + + + D A R Y PH ++ L +Q +D G Sbjct: 127 AKVAKELNLPYCLSTAGSTSIEDVGAANGAGPRFFQLYMPHDDELT-LSLLQRAHDSGFT 185 Query: 135 ---------QKAHQAVHVLGADGLFLHL--------NP-----LQEII-----QPN---- 163 Q A + ++ F H +P L+E QPN Sbjct: 186 ACILTLDTWQLAWRHRDAANSNYAFYHGVGADLGLSDPVFQKRLKEAGIDPKKQPNEAGA 245 Query: 164 --GNTNFA---DLSSKIALLSSAMD-----VPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + K+ L P LK + D ++ G+ + Sbjct: 246 MWIDNVWHGRAWSWEKMPWLMEQWKRISGGKPFCLKGIQH---VADARKAVQLGVDGIVV 302 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + G + D I ++ + G+R D+ Sbjct: 303 SNHAGRQVDGACASLDALEKI-----------------VNAVGDKTYIMFDSGVRGAADV 345 Query: 274 LKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K++ LGA + ++ V ++SL +F + M + G + V ++ ++ Sbjct: 346 FKALALGAKFVFVGRLWVWGLSIKGELGVRHVMKSLLADFDILMNVSGYQSVDQIDRDS 404 >gi|254500539|ref|ZP_05112690.1| FMN-dependent dehydrogenase superfamily [Labrenzia alexandrii DFL-11] gi|222436610|gb|EEE43289.1| FMN-dependent dehydrogenase superfamily [Labrenzia alexandrii DFL-11] Length = 378 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 112/339 (33%), Gaps = 77/339 (22%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV 97 + D +G+ ++ P+ ++ + TG + E + A AAE+ V + + V Sbjct: 55 NIDNRSVKTTMIGQDVAMPVALAPVGLTGMQHADGEILA---AQAAEEFGVPFTLSTMSV 111 Query: 98 MFSDHNAIKS-----FEL-----RQYAPHTVLISNL-GAVQLNYDFGVQKAHQAVHVLGA 146 + A + F+L R ++ + + ++ G L +Q Q + Sbjct: 112 CSIEDVAEHTKNPFWFQLYVMRDRGFSENLMKRAHTAGCSALVLTLDLQVLGQRHRDIK- 170 Query: 147 DGLFL------HL------------NPLQ-----------EIIQPNGNTNFADL------ 171 +GL H+ N LQ + T+ A+ Sbjct: 171 NGLSTPPKPKPHVLVDLALKPRWCWNMLQTKRREFGNIVGHVSGVEDMTSLAEWTASQFD 230 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S + + D L+LK + D + G ++ GG + Sbjct: 231 PTLDWSSVEWVKKHWDRKLILKGIN---DVEDARIAADLGADAIVVSNHGGRQLDGALAS 287 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D+ DI ++ + GG+R+G D+ K++ +GA + Sbjct: 288 YDILRDI-----------------VDAVGDKVEVHVDGGIRSGQDVFKAVAMGAHSTYIG 330 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 F+ V +E + KE V+M L G ++ Sbjct: 331 RAFIYGLGAMGKPGVRQVLEIIHKELDVTMGLCGETDIK 369 >gi|33591694|ref|NP_879338.1| L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|33571337|emb|CAE44813.1| L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|332381113|gb|AEE65960.1| L-lactate dehydrogenase [Bordetella pertussis CS] Length = 387 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L+LK + L + D L +SG ++ GG S Sbjct: 239 WDDVEWIKRRWGGKLILKGI---LDAEDARLAAESGADALIVSNHGGRQLDGAVSSISAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R+G D+LK++ LGA + FL Sbjct: 296 PAIAE-----------------AVGSRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFL 338 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A+ L KE V+M L G K + ++ Sbjct: 339 YGLGAYGQAGVTRALGILYKEMDVTMALCGHKHINQI 375 >gi|171687979|ref|XP_001908930.1| hypothetical protein [Podospora anserina S mat+] gi|170943951|emb|CAP69603.1| unnamed protein product [Podospora anserina S mat+] Length = 514 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 23/150 (15%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D P++LK V LS D L +SG+ ++ GG Sbjct: 371 DRPIVLKGV---LSVEDAVLAARSGVDGIIVSNHGGRQLDGA------------------ 409 Query: 243 IPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDA 300 +P+ L E+ + + G+R GVD+LK++ LGA + P + + ++ Sbjct: 410 VPSLEMLPEIVDAVGDRLTVMFDSGIRTGVDVLKALALGAKAVLVGRPVIYGLGIAGTEG 469 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + SL + SM LLG + V EL + Sbjct: 470 AKHVLASLLADVDQSMGLLGVQTVGELNRS 499 >gi|72383010|ref|YP_292365.1| (S)-2-hydroxy-acid oxidase [Prochlorococcus marinus str. NATL2A] gi|72002860|gb|AAZ58662.1| (S)-2-hydroxy-acid oxidase [Prochlorococcus marinus str. NATL2A] Length = 394 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 120/374 (32%), Gaps = 84/374 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + +N +++ R +S D + L ++ P L+ + G+++M Sbjct: 37 ADREQTLSQNCNAYNEILFRPRC--AVSVPSCDLGISVLDQQFQLPFLLGPV--GSSRMF 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---------SFEL-----RQYAPHTV 118 + +AA + A G S ++L ++ A T+ Sbjct: 93 YP--QGEVVAAREAGKA-GTGYTLSTLSGCLLEDVKAATNGPAWYQLYLLGGKEVALKTI 149 Query: 119 LISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL-------QEIIQP------ 162 + A+ + D V + + L +NPL Q +++P Sbjct: 150 ARAKEAGFSAIVVTIDTPVSGLRER-DMRSGTQQLLSMNPLEMLPYIPQILVKPCWMTQW 208 Query: 163 ---NGNTNFADL----------------------SSKIALLSSAMDVPLLLKEVGCGLSS 197 G +F ++ + + A +++K + G Sbjct: 209 LSDGGLMSFPNVQLDDGPMGYTAIGPALEQSVVTWDDLQWIREAWGGKIIVKGIHIG--- 265 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + + G I+ G + + +I Sbjct: 266 DDAKKAAELGADAIVISNHGARQLDSVAPTIRVLPEI-----------------LAAVDG 308 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + + GG+R G D++K++ LGA + + A V AIE L+ + + +M Sbjct: 309 KIDVLLDGGIRRGSDVVKALCLGAKGVLIGRAYAYGLAAAGGKGVARAIEILQTDIVRTM 368 Query: 317 FLLGTKRVQELYLN 330 LLG V +L + Sbjct: 369 KLLGCGSVADLSKS 382 >gi|325959762|ref|YP_004291228.1| glutamate synthase (NADPH) [Methanobacterium sp. AL-21] gi|325331194|gb|ADZ10256.1| Glutamate synthase (NADPH) [Methanobacterium sp. AL-21] Length = 499 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 134/366 (36%), Gaps = 71/366 (19%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLGK------KLSFPLLISSMTGGNNKMIERI 75 DD + + LP + D V S+ LGK KLS P++IS ++ G +I Sbjct: 127 SLDDLYFVPAQVMILPLNATDPVKTSI-VLGKDAKKPLKLSSPIMISGLSFGAVSKSAKI 185 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----FELRQYAPHTVLISNLGAVQLNYD 131 ++ A V G V+ + + K+ + ++ ++ N A+++ + Sbjct: 186 --VISKTASNLNVGFNSGEGGVLDEELESSKTMVVQYSTGRFGVEDEILKNAAAIEIRFG 243 Query: 132 FGVQK-------AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS-AMD 183 G A + + + + P DL K++ L + Sbjct: 244 QGAYPGKGSYLPAEKMTEEVSSKRNLENGEPAYSPAHHPDILTPRDLKKKVSKLRRMSSG 303 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ K +GCG D+++ +++G+ + + G GG + + + R+ + GI Sbjct: 304 APIGAK-IGCGNVEDDVKVLVEAGVDFIALDGFGGGTGATDKYVRE----------NVGI 352 Query: 244 PTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLG------------- 284 P +L A+ I SGGLR+ D K + LGA Sbjct: 353 PIFSALPRAKQTLENLKPKRRVSLIGSGGLRSSADFAKCLALGADAVYIGTAALIAINCE 412 Query: 285 ------------GLA--SPFLKPAMDSSDAVVAAIESLR---KEFIVSMFLLGTKRVQEL 327 G+A +P L+ +D ++V I ++ +E + G V +L Sbjct: 413 QYRLCYTGNCPTGIATQNPKLEKQVDQEESVHKLINFIKLSSQEVANLTRITGKDNVSKL 472 Query: 328 YLNTAL 333 + + Sbjct: 473 DKSDLV 478 >gi|29834024|ref|NP_828658.1| L-lactate 2-monooxygenase [Streptomyces avermitilis MA-4680] gi|29611149|dbj|BAC75193.1| putative L-lactate 2-monooxygenase [Streptomyces avermitilis MA-4680] Length = 389 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 114/346 (32%), Gaps = 62/346 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N+ D ++ R L E D SVE LG+ L PL ++ + G ++ Sbjct: 51 AGNGSTARANRSALDRRRIVPRML--RDVHERDLSVEVLGRTLPAPLALAPV--GVLSIM 106 Query: 73 ER--------------INRNLAIAAEK--TKVAMAVGS-----QRVMFSDHNAIKSFELR 111 + L+ A+ +VA A+G Q D +SF R Sbjct: 107 HPDAESAAARAAAAQGVPYILSSASSTPMERVAEAMGDAERWFQLYWAKDREVTRSFLNR 166 Query: 112 QYAP---------HTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGLF--LHLNPL 156 A T L++ +L L + GV A+ GL +H +P Sbjct: 167 AKAAGYTALFVTLDTPLLAWRPRDLDQAYLPFLHGVGTANYFTDPAFRAGLAKPVHEDPN 226 Query: 157 QEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 ++ + + L D P++LK + L D +G+ ++ Sbjct: 227 AAVMHFVSMFADPGKTWPDLEFLRENWDGPIVLKGI---LHPDDARRAASAGMDGVVVSN 283 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + D + + + G+R G DI K Sbjct: 284 HGGRQVAGSVAAADALPRV-----------------VEAAGDRLTVLFDSGIRTGDDIFK 326 Query: 276 SIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 ++ LGA + P+ +D V + L EF +++ L G Sbjct: 327 ALALGARAVLVGRPYAYGLGLDGQAGVEHVVRCLLAEFDLTLALSG 372 >gi|319779419|ref|YP_004130332.1| L-lactate dehydrogenase [Taylorella equigenitalis MCE9] gi|317109443|gb|ADU92189.1| L-lactate dehydrogenase [Taylorella equigenitalis MCE9] Length = 388 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 111/370 (30%), Gaps = 76/370 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ + + + + LG + + PL ++ + G G + Sbjct: 36 ESTYRANESDLNKIKFRQKV--AVDIENRSTRATLLGDEYAMPLALAPV-GICGMQRADG 92 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISNL 123 I A AAEK V + + + A + F+L R + + + Sbjct: 93 EI--LSAQAAEKFGVPFTLSTVSCASIEDVAQNTKKPFWFQLYMMKDRGFMADLIQRAKE 150 Query: 124 GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFADLS 172 L +Q Q + + + L L L P + F Sbjct: 151 ACSALVVTLDLQVLGQRHNEVKNGMTVPPKPTITNLLNLALKPDWCWGMLHTKRRFYGNL 210 Query: 173 ---------------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + ++S ++LK + + D Sbjct: 211 VGHVKGMENVTALSEWTARQFDASLNWKDLDWIASQWGKKIILKGI---MDPDDAIEACN 267 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 SG F ++ GG S I LE + + G Sbjct: 268 SGADAFVVSNHGGRQLDGALSSIKALLPI--------------LEAVDKISSNCEVWLDG 313 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G DIL++ +GA + P++ D V+ +++ ++KE V+M G + Sbjct: 314 GIRSGQDILRAYAMGADGVMVGRPYIYGLGAYGYDGVLKSLDIMQKELSVTMGFCG---I 370 Query: 325 QELYLNTALI 334 EL I Sbjct: 371 TELTQANKSI 380 >gi|254387851|ref|ZP_05003089.1| isopentenyl-diphosphate delta-isomerase II [Streptomyces clavuligerus ATCC 27064] gi|326446798|ref|ZP_08221532.1| isopentenyl-diphosphate delta-isomerase II 2 [Streptomyces clavuligerus ATCC 27064] gi|197701576|gb|EDY47388.1| isopentenyl-diphosphate delta-isomerase II [Streptomyces clavuligerus ATCC 27064] Length = 392 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 23/162 (14%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A L S +P+L+K V + + +G ++ GG Sbjct: 246 EDLATLKSWTHLPVLVKGV---CDPGEARCLVDAGADGIAVSNHGGRQLDS--------- 293 Query: 233 DIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G+ L +A + G+R G D+L ++ LGA + P+L Sbjct: 294 ---------GVAALDCLPAVAAAVSGRVPLLFDSGIRTGTDVLIALALGADAVMIGRPWL 344 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ +D V + L+ EF ++ L G L + Sbjct: 345 YGLALGGADGVAHVLRCLKDEFTSALTLTGHHTCATLSPSDL 386 >gi|156058127|ref|XP_001594987.1| hypothetical protein SS1G_04795 [Sclerotinia sclerotiorum 1980] gi|154702580|gb|EDO02319.1| hypothetical protein SS1G_04795 [Sclerotinia sclerotiorum 1980 UF-70] Length = 425 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 63/172 (36%), Gaps = 24/172 (13%) Query: 158 EIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 E Q F+ ++I LL D P++LK + D +K+G+ ++ Sbjct: 254 EASQEWIGDIFSGAAHTWNQIQLLKDNWDGPIVLKGIQH---PDDALEAVKAGVDGIIVS 310 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG ++ +I ++ + G+R GVD++ Sbjct: 311 NHGGRQLDGAIGSLEMLPEI-----------------VEAVGDKLTVLFDSGIRTGVDVI 353 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 K++ LGA + P + A+ ++ + + SM L G + ++ Sbjct: 354 KALSLGAKAVLIGRPAIYGLAVGGKQGAKQILQGILADVDQSMGLAGIRDIK 405 >gi|319944537|ref|ZP_08018808.1| L-lactate dehydrogenase [Lautropia mirabilis ATCC 51599] gi|319742250|gb|EFV94666.1| L-lactate dehydrogenase [Lautropia mirabilis ATCC 51599] Length = 385 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 24/162 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + +++K + + D L +KSG ++ GG Sbjct: 236 WDDVAWIKDKWGGKIIIKGI---MEPEDAHLAVKSGADALIVSNHGGRQLDGA------- 285 Query: 232 SDIGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 +P+ +L + + G+R+G D+++S+ +GA + P Sbjct: 286 -----------LPSIEALPAIVDAVGKDNIEIYLDSGVRSGQDVIRSVAMGARGVFIGRP 334 Query: 290 FLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 FL +A V A+E +R E ++M G + ++++ + Sbjct: 335 FLYGLGAMGEAGVTKALEVIRNEADLTMAFCGLRNIKDVNKS 376 >gi|284989171|ref|YP_003407725.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geodermatophilus obscurus DSM 43160] gi|284062416|gb|ADB73354.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Geodermatophilus obscurus DSM 43160] Length = 389 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L P +LK + D + +G+ ++ GG + Sbjct: 239 WEDVAWLRQQWGGPFMLKGITR---PDDARRAVDAGVSAISVSTHGGNNLDGTPGAIRSL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 296 PGV-----------------VDAVGDQVEVVMDGGVRRGSDVVKAMALGARAVMIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V + LR+ ++ LG V +L ++ Sbjct: 339 WGMAASGERGVQNVLSILRQGIDEALLGLGKASVHDLTREDVVL 382 >gi|116695768|ref|YP_841344.1| L-mandelate dehydrogenase [Ralstonia eutropha H16] gi|113530267|emb|CAJ96614.1| L-Mandelate dehydrogenase [Ralstonia eutropha H16] Length = 385 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 IA L P+++K + L+ D E+ + G+ ++ GG Sbjct: 233 CWDDIAWLRRHWHGPVIIKGI---LTPADAEIAARQGLDGIVVSNHGGRQLEGAP----- 284 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 L GG+R G DI K++ +GA + Sbjct: 285 -------------SAVEMLPAIVAAAGGMHVFVDGGVRRGADIAKALAMGARGVLVGRAP 331 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A V + LR EF ++ LLG + L Sbjct: 332 LYGLAARGPRGVAEVLAILRGEFETTLRLLGVPQAARL 369 >gi|295692123|ref|YP_003600733.1| glycolate oxidase [Lactobacillus crispatus ST1] gi|295030229|emb|CBL49708.1| Glycolate oxidase [Lactobacillus crispatus ST1] Length = 333 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 104/319 (32%), Gaps = 46/319 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R L E D + E GKK + PL +++++ N Sbjct: 39 ADDANVHNRSYLDNILVEMRLL---DSVEPDLTTEIFGKKYASPLTLAAVSHLNKVLPDK 95 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + A AA+ T + M + + +R P+ +G ++ Sbjct: 96 TRKPMQEKARAAKNTNTLNWIGMESNEEYAEIVKESGD---TVRIVKPYADHDKIMGELK 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + G + + D N +++ +G S + A+ +P + Sbjct: 153 QAEELGAVAVGMDIDHVPGD------NGKYDVV--DGILLGPISFSDLEKYVHAVKLPFV 204 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 K + LS D +G + ++ G + +G+P Sbjct: 205 AKGM---LSVRDAVKARDAGAKAIVVSHHHGR----VP---------------FGVPPLK 242 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAA 304 L + N G L G D K++ LGA + L + D A Sbjct: 243 VLPAIKQALNGSGMTIFVDGSLMTGYDAYKALALGADAVLIGRGILSELLKDGQKATEDK 302 Query: 305 IESLRKEFIVSMFLLGTKR 323 I+ + ++ M G + Sbjct: 303 IKKMNEQLAQMMLYTGVRD 321 >gi|330824010|ref|YP_004387313.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] gi|329309382|gb|AEB83797.1| L-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans K601] Length = 398 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 117/367 (31%), Gaps = 75/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F ++ R L ++S +VE G++ S P I+ M G N Sbjct: 45 AEDNTSLRDNREVFGEYGFATRVLRDVSRR--SQAVELFGQRYSSPFGIAPM-GINALST 101 Query: 73 ERINRNLAIAAEKTKV-------------------------AMAVGSQ--RVMFSDHNAI 105 R + LA AA++ + A G Q D A Sbjct: 102 YRGDLVLARAAQQAGIVSIMSGTSLIPMEEVARESPATWFQAYIPGDQERIDALVDRVAR 161 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQA----------VHVLGADGLFLHLN 154 F + +N ++ + ++ + + V L H Sbjct: 162 AGFGTLVVTVDIPVSANRENNIRTGFSTPLRPSLRLAWDGMVRPRWVAGTFLHTLLRHGM 221 Query: 155 PLQE---------IIQPNGNTNF--ADLSS--KIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ + +F D + I + PL++K + LS D Sbjct: 222 PHFENSFATRGAPIVSSSVLRDFSARDHLNWGHIEAIRRRWKGPLVVKGL---LSVEDAL 278 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG S + + + Sbjct: 279 QARRVGADAVVLSNHGGRQLDGAISPLRVLEAV-----------------VAAVGPDYPV 321 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI L++E +M +LG Sbjct: 322 LIDSGFRRGSDVLKALALGARMVLVGRPFNYAAAVAGEAGVAHAIGLLQEEVDRNMAMLG 381 Query: 321 TKRVQEL 327 EL Sbjct: 382 VTGCAEL 388 >gi|331699070|ref|YP_004335309.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] gi|326953759|gb|AEA27456.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] Length = 415 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I L PL++K + G ++ + G+ ++ GG + + D+ Sbjct: 270 VDDIRWLRERWAGPLVVKGILRG---DEVPQLVDLGVDGIVVSNHGGRNMDGAPATIDVL 326 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-F 290 ++ A+ G+R G D+++++ LGA + P Sbjct: 327 GEV-----------------VDAAAGRAEVFLDSGVRRGADVVRALALGAQAVLVGRPYM 369 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V +E LR E + M LG V E+ Sbjct: 370 FALAAAGEAGVDRVLELLRNEVVRVMSQLGAATVDEI 406 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 18/171 (10%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN++ D L RAL +VD S LG +S P +++ + + +M Sbjct: 35 AGDEVTLRRNRESLDRIALKPRALA--DVAKVDTSTTILGDPVSVPFMLAPCS--SARMC 90 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + +A AA + A AV + A L L ++ Sbjct: 91 HSASEPAVARAAGRLGTAFAV--AGGASEKPE------VIARAATGPLWYQL-YMKPEQQ 141 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 V+ + V G L + ++ I+P + + +S + Sbjct: 142 ANVELVDR-VEAAGYRVLCVTVDS---AIKPYREKDLRNRVGIPLKISPQL 188 >gi|297154534|gb|ADI04246.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 393 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 107/360 (29%), Gaps = 66/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N+ FD ++ R L DP+ +G + P+ ++ + + + Sbjct: 51 AGRERTLVGNRGAFDRVAVVPRVLA--DVSSCDPACSLVGSPAALPVAVAPIA---YQRL 105 Query: 73 ERINRNLA--IAAEKTKVAMAVGSQRVMFSDHNAIK----SFELRQYAPHTVLIS----- 121 LA AA + V V + + + A F+L ++ Sbjct: 106 FHPEGELAVARAAADSGVPYTVSTLSSVPMEEIAATGATTWFQLYWLRDKGAVLDLVQRA 165 Query: 122 -NLGAVQLNYDFGVQ-KAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNFAD------ 170 +G+ L V + + L + + Sbjct: 166 EAIGSEALVLTVDVPVMGRRLRDMRHGFALPPTIRAANLDGGAMSSAHERVERGSAVAAH 225 Query: 171 ---------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 I L +PL++K + D + G ++ GG Sbjct: 226 TASAFAPSFTWHDIEWLRERTGLPLVVKGLSH---PADALRAAELGAAAVVVSNHGGRQL 282 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL----EMAR-PYCNEAQFIASGGLRNGVDILKS 276 +PT ++L E R + Q + G+R G D+L + Sbjct: 283 DGA------------------VPTAVALPGVVEAVRGAFGESCQVLVDSGIRGGADVLGA 324 Query: 277 IILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE---LYLNTA 332 + LGAS L P + +A + L +EF +M L G + L T Sbjct: 325 MALGASGVLLGRPVMWGLAAGGEAGCARVLSLLGEEFRHAMALAGCADLAAVARLRTTTM 384 >gi|115703417|ref|XP_001202103.1| PREDICTED: similar to MGC108441 protein [Strongylocentrotus purpuratus] gi|115752684|ref|XP_789501.2| PREDICTED: similar to MGC108441 protein [Strongylocentrotus purpuratus] Length = 497 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 61/305 (20%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--------------SMTGGNNK 70 F + + R L + + LG+ + +P+ IS + G Sbjct: 41 AFSRYRIRSRVLQ--DVSKRCLATTVLGQSIPYPICISPTAFHFFAHPDGEEATAKGAEA 98 Query: 71 MIERINRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFELRQYAPHTVL------- 119 + + + VAMA + + + +R+ Sbjct: 99 AGALMILSCGACSSMEDVAMAAPGGLRWMNIYPFTDRQLTEYTIRKAEKLGFKALVVTVD 158 Query: 120 --ISNLGAVQLNYDFGVQKAHQAV--------HVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + +GAV + V + + H + E+ N Sbjct: 159 SPVPGIGAVSEHEQLNHPSHRMPVYEADIPSARAAKQESITNHFKYVDEM---ESNPKAT 215 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + +P++ K + L++ +G+ ++ GG + D Sbjct: 216 W--EYIRWIKKVTSLPVVCKGI---LTAESASDAANAGVDGILVSAHGGRQLESSPAPID 270 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 +++ G + GG+R G D+ K++ GA L P Sbjct: 271 ALAEVVEAVHGRG----------------VEIYMDGGVRTGTDVFKALGRGARAVFLGRP 314 Query: 290 FLKPA 294 L Sbjct: 315 ILWGL 319 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 19/132 (14%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N I + +P++ K + L++ +G+ ++ GG Sbjct: 362 EMQYNPKATWEYIRWIKKVTSLPVVCKGI---LTAESASDAANAGVDGILVSAHGGRQQE 418 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + D +++ G + GG+R G D+ K++ GA Sbjct: 419 SSPAPIDALAEVVEAVHGRG----------------VEVYMDGGVRTGTDVFKALGRGAR 462 Query: 283 LGGLASPFLKPA 294 L P L Sbjct: 463 AVFLGRPILWGL 474 >gi|222832298|gb|EEE70775.1| predicted protein [Populus trichocarpa] Length = 308 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 24/182 (13%) Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 L + + + +A + L++K + LS+ D L G ++ Sbjct: 143 LSASVMRDFSDRSHLAWPHLAAIRQRWQGQLVVKGI---LSAADAVLARDHGADGLIVSN 199 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + GI + G+R G D+LK Sbjct: 200 HGGRQLDGAVAPLRVLP---------GIV---------RAVPGLPVMLDSGVRRGTDVLK 241 Query: 276 SIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ LGA + PF A + V A+ LR+E + M +LG R+ + A + Sbjct: 242 ALALGARCVFVGRPFNYAASVGGPAGVTHAMALLREEVLRDMAMLGATRLD--QVTPACV 299 Query: 335 RH 336 RH Sbjct: 300 RH 301 >gi|156065353|ref|XP_001598598.1| hypothetical protein SS1G_00687 [Sclerotinia sclerotiorum 1980] gi|154691546|gb|EDN91284.1| hypothetical protein SS1G_00687 [Sclerotinia sclerotiorum 1980 UF-70] Length = 421 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 119/359 (33%), Gaps = 73/359 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F ++ R L + + D E G K+S P+ + + G NK+ + + Sbjct: 71 ANRQAFYRHRIVPRML--VDTNNRDTKTEIFGHKVSAPIGFAPI--GINKIYNPLAELPV 126 Query: 80 AIAAEKTKVAMAVGSQ-RVMFSDHNAIKSFELRQ---YAPHTVLISNLGAVQLNYDFGV- 134 A A++ + + + D A R Y PH ++ L ++ YD G Sbjct: 127 AKVAKELNLPYCLSTAGSTSIEDVGAANGAGPRFFQLYMPHDDELT-LSLLRRAYDSGFT 185 Query: 135 ---------QKAHQAVHVLGADGLFLHL--------NP-----LQEII-----QPN---- 163 Q A + V+ ++ F H +P L+E QPN Sbjct: 186 ACILTLDTSQLAWRHRDVVNSNYAFYHGQGADLGLSDPVFQKRLEEAGIDAKKQPNEAGA 245 Query: 164 --GNTNFA---DLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + K+ L P LK + D + ++ G+ + Sbjct: 246 MWIDNVWHGRAWSWEKMPWLMEHWKKISKGKPFCLKGIQH---VADAKKAVELGVDGIVV 302 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + G + D I ++ + G+R D+ Sbjct: 303 SNHAGRQVDGACASLDALEKI-----------------VNAVGDKTYIMFDSGIRGAADV 345 Query: 274 LKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K++ LGA L ++ V ++SL +F + M + G + V ++ ++ Sbjct: 346 FKALALGAKFVFLGRLWVWGLSIKGELGVRHVMKSLLADFDILMNVSGYQSVDQIDRDS 404 >gi|167577407|ref|ZP_02370281.1| dehydrogenase, FMN-dependent family protein [Burkholderia thailandensis TXDOH] Length = 407 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 70/380 (18%), Positives = 123/380 (32%), Gaps = 82/380 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ + R L + VE G++ + P I+ M G + Sbjct: 55 AEDNRTRDDNRAVFDEYGFVTRVL--RDVSQRRQGVELFGRRYASPFGIAPM-GIHALST 111 Query: 73 ERINRNLAIAAEKTKVA--MAVGSQRV-------------------------MFSDHNAI 105 R + LA AA++ +A M+ S + A Sbjct: 112 YRGDVVLARAAQRAGIASIMSGSSLIPLEDVAAAAPGTWFQAYLPGDAGRIRALVERVAR 171 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL-------------- 151 + + +N + N G + L DGL Sbjct: 172 AGYRTLVVTVDIPVSAN---RENNVRSGFSTPLRPSPRLFWDGLTRPRWLLRTFTRTLLA 228 Query: 152 HLNPLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSM 198 H P E I+ N +F+ + + + L++K V LS Sbjct: 229 HGMPHFENSFATRGAPILSANVLRDFSARDHLSWAHVRRIREQWTGELVIKGV---LSVD 285 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D + ++G ++ GG S + D+ + + Sbjct: 286 DALIAREAGADGIILSNHGGRQLDGAVSPMRILRDV-----------------VQAVGDG 328 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMF 317 + G R G D+LK++ LGA + + PF A+ V AI LR+E ++ Sbjct: 329 YPVMIDSGFRRGSDVLKAVALGARMVFVGRPFNYAAAVAGEAGVAHAIALLREEVDRNLA 388 Query: 318 LLGTKRVQELYLNTALIRHQ 337 +LG ++L LIR + Sbjct: 389 MLGVNGCEQL-SPDVLIRKR 407 >gi|152986659|ref|YP_001348239.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PA7] gi|150961817|gb|ABR83842.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PA7] Length = 383 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 108/363 (29%), Gaps = 77/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + LG++++ P+ I+ TG G Sbjct: 33 EGTYRANQDDFAAIKLRQRV--ARNIENRSLRTRMLGQEMAMPVAIAP-TGLAGMQHADG 89 Query: 74 RINRNLAIAAEKTKV-----AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISNL 123 I A AA + V M++ S + ++ F+L R + + + Sbjct: 90 EILA--ARAAAEFGVRYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIERARA 147 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q Q L A+ L + P + Sbjct: 148 AGCDALVLTLDLQIIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFGN 207 Query: 171 ----------------LSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 +++ + + L+LK + L + D L Sbjct: 208 IVGHVKGVDDMGSLSEWTARQFDPRLNWGDVEWIKRRWGGKLVLKGI---LDAEDARLAA 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 SG ++ GG S I + Sbjct: 265 DSGADALIVSNHGGRQLDGAPSTISALPAI-----------------VEAVGERIEVWLD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+R+G D+LK+I LGA + P+L V A+E + +E ++M G Sbjct: 308 SGIRSGQDVLKAIALGARGTMIGRPYLYGLGALGQAGVTRALEIIARELDLTMAFCGHTD 367 Query: 324 VQE 326 ++E Sbjct: 368 IRE 370 >gi|161522821|ref|YP_001585750.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia multivorans ATCC 17616] gi|189348339|ref|YP_001941535.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] gi|160346374|gb|ABX19458.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia multivorans ATCC 17616] gi|189338477|dbj|BAG47545.1| cytochrome L-lactate dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 383 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L+LK + + + D L SG ++ GG S + Sbjct: 235 WADVEWIKKLWGGKLILKGI---MDAEDARLAAASGADALIVSNHGGRQLDGAPSTIEAL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + G+R+G D+LK+I LGA + FL Sbjct: 292 PPI-----------------VEAVGTQIEVWLDSGIRSGQDVLKAIALGARGTMIGRAFL 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 +A V +E + KE ++M G + ++ Sbjct: 335 YGLGAMGEAGVTKTLEIIHKELDITMAFCGHRDIR 369 >gi|110634743|ref|YP_674951.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium sp. BNC1] gi|110285727|gb|ABG63786.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Chelativorans sp. BNC1] Length = 391 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 23/180 (12%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 ++N + I + + I+ L S + PL++K + L D + G Sbjct: 227 NMNDMAAYIASVLDPDVTW--DDISWLRSEWEGPLIIKGI---LHPDDACEAIARGCDGV 281 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 I+ GG S D + GG+ G Sbjct: 282 QISNHGGRQLDGTLSAIDALPAVSD-----------------AVEGRVPIFLDGGIERGT 324 Query: 272 DILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 DILK+I LGA+ + A+ V A + L E +M + G K + +L + Sbjct: 325 DILKAIALGATACVIGRAHLWGLAVAGGKGVEAVCDVLVAELRNAMVIGGWKALSDLDRS 384 >gi|325130446|gb|EGC53207.1| L-lactate dehydrogenase [Neisseria meningitidis OX99.30304] Length = 229 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L++K + + D E KSG ++ GG S Sbjct: 78 WDDVARIKDLWGGKLIIKGI---MEPEDAEKAAKSGADALIVSNHGGRQLDDTVSAIKAL 134 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI ++ + G+R+G DILK+ LGA + FL Sbjct: 135 PDI-----------------VSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIGRAFL 177 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + V A+E L KE +SM G + +Q+ Sbjct: 178 YGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQD 213 >gi|296389206|ref|ZP_06878681.1| L-lactate dehydrogenase [Pseudomonas aeruginosa PAb1] Length = 383 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 108/364 (29%), Gaps = 77/364 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMI 72 + N+ F L R + + LG++++ P+ I+ TG G Sbjct: 32 SEGTYRANQDDFAAIKLRQRV--ARNIENRSLRTRMLGQEMAMPVAIAP-TGLAGMQHAD 88 Query: 73 ERINRNLAIAAEKTKV-----AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 I A AA + V M++ S + ++ F+L R + + + Sbjct: 89 GEILA--ARAAAEFGVRYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIDRAK 146 Query: 123 L-GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD 170 G L +Q Q L A+ L + P + Sbjct: 147 AAGCDALVLTLDLQIIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFG 206 Query: 171 -----------------LSSK----------IALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +++ + + L+LK + L + D L Sbjct: 207 NIVGHVKGVDDMGSLSEWTARQFDPRLNWGDVEWIKRLWGGKLVLKGI---LDAEDARLA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG ++ GG S I + Sbjct: 264 ADSGADALVVSNHGGRQLDGAPSTISALPAI-----------------VEAVGERIEVWL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+LK+I LGA + P+L V A+E + +E ++M G Sbjct: 307 DSGIRSGQDVLKAIALGARGTMIGRPYLYGLGALGQAGVTRALEIIARELDLTMAFCGHT 366 Query: 323 RVQE 326 ++E Sbjct: 367 DIRE 370 >gi|46123011|ref|XP_386059.1| hypothetical protein FG05883.1 [Gibberella zeae PH-1] Length = 202 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 61/161 (37%), Gaps = 20/161 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + +P++LK + ++ D +++G ++ GG S ++ Sbjct: 44 WDLFKEIKAHTKLPIILKGIT---TTEDALRAVEAGADGIWLSNHGGRQVDYSPSPLEIA 100 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I A + + IA G+R G D++K + LG GL PF+ Sbjct: 101 YEIR--------------RNAPEIFAKTEVIADSGIRYGSDVIKLLALGVKAVGLGRPFM 146 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + I+ L+ E + +G + +L+ + Sbjct: 147 YSNVYGVEGPKKLIQILKSEILADAAQIG---ITDLHSIPS 184 >gi|115923330|ref|XP_787692.2| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Strongylocentrotus purpuratus] gi|115965110|ref|XP_001195399.1| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Strongylocentrotus purpuratus] Length = 363 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 20/172 (11%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N I L S +P++LK + L+ +G+ ++ GG + + Sbjct: 202 NSPKTWDDITWLKSITSLPIVLKGI---LTGEAAMEAADAGVSGIIVSAHGGRHMDGVPA 258 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D+ ++ + G + GG+R+G D LK++ LGA + Sbjct: 259 PIDVLEEVVSAVKGRG----------------VEVYMDGGVRSGTDALKALGLGARAVLI 302 Query: 287 ASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 P L A D V + LR E ++ + +++ + IR Q Sbjct: 303 GRPALWGLACDGPAGVTKVLSILRFELETALGISADRKLGGTRMPLLFIRKQ 354 >gi|296168548|ref|ZP_06850352.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896611|gb|EFG76250.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 398 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L P +LK V + D + + +G+ ++ GG + + Sbjct: 239 WEDIAWLRELWGGPFMLKGV---MRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRAL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ LGA + +L Sbjct: 296 PAVAA-----------------AVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYL 338 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ LG V +L + L+ Sbjct: 339 WGLAAAGQAGVENVLDILRGGIDSALMGLGHAGVADLGPDDILV 382 >gi|255654872|ref|ZP_05400281.1| putative oxidative stress protein [Clostridium difficile QCD-23m63] gi|296449618|ref|ZP_06891394.1| glutamate synthase domain protein [Clostridium difficile NAP08] gi|296878062|ref|ZP_06902077.1| glutamate synthase domain protein [Clostridium difficile NAP07] gi|296261554|gb|EFH08373.1| glutamate synthase domain protein [Clostridium difficile NAP08] gi|296430815|gb|EFH16647.1| glutamate synthase domain protein [Clostridium difficile NAP07] Length = 480 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 136/366 (37%), Gaps = 75/366 (20%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD ++ LP DEV+ +GKK + P+ IS M+ G +I Sbjct: 116 SWDDILIMGAQLNPLPLNEHDEVNT-TTIIGKKAKKPMIIENPVYISHMSFGALSKELKI 174 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNY 130 LA A K+K AM G ++ + A + + +Y P+ ++ N A+++ Sbjct: 175 --ALAKGAAKSKTAMCSGEGGILPEEKEASYKY-IFEYVPNKYSVTEENLKNSDAIEIKI 231 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQP------NGNTNFADLSSKIALLSS 180 G + H + + + P+ +++I P + L ++ +S Sbjct: 232 GQGTKPGMGGHLPGEKVTEEIAKVRNKPVGKDVISPSCFEEIQSKEDLKKLVDELREVSE 291 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ +K + G D+E + + I GRGG + + + +D S Sbjct: 292 --GRPIGVK-ISAGHIEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATS-------- 340 Query: 241 WGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-- 294 IPT +L AR Y + + + +GGLR D K+I +GA +AS L A Sbjct: 341 --IPTIFALYRARKYIDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAAAC 398 Query: 295 ----------------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +S++ V + +E + G K + + Sbjct: 399 QQYRICGSGKCPVGVATQDEELRKRLHIENSANRVANFLNVSLEELKTFARISGHKDIHD 458 Query: 327 LYLNTA 332 L ++ Sbjct: 459 LSVDDL 464 >gi|160896831|ref|YP_001562413.1| L-lactate dehydrogenase [Delftia acidovorans SPH-1] gi|160362415|gb|ABX34028.1| L-lactate dehydrogenase (cytochrome) [Delftia acidovorans SPH-1] Length = 411 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 22/165 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + +AL+ L++K + LS D +G ++ GG Sbjct: 260 GARDHLSW-EHLALIRRRWKGRLVVKGI---LSPQDALAARDAGADAIILSNHGGRQLDG 315 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 S + + + + G R G D+L ++ LGA Sbjct: 316 AVSPLHMLP-----------------LVVGALGPDYPVMIDSGFRRGNDVLVALALGAHF 358 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + PF A+ V+ AI L E +M L+G + +QEL Sbjct: 359 VFVGRPFNYAGAVGGEAGVLHAIAILAAEMRRNMALIGVQGLQEL 403 Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 D + N++ FD + R L + S + LG+ + P I+ M Sbjct: 60 CETDKSLRANREAFDAHRWVTRVLTDTSRR--TLATPLLGQTWAAPFGIAPM 109 >gi|111222991|ref|YP_713785.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia alni ACN14a] gi|111150523|emb|CAJ62222.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia alni ACN14a] Length = 392 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 29/168 (17%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S +A L P ++K + D + G ++ GG + Sbjct: 239 WSDLAWLREQWGGPFMIKGITR---PDDARRAVDVGASAISVSNHGGNNLD--------- 286 Query: 232 SDIGIVFQDWGIPTPLSLE----MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 TP S+ + ++ + + GG+R G D++K++ LGA + Sbjct: 287 ------------STPASIRCLPGVVDAVGDQVEVLLDGGIRRGSDVVKALALGARAVLIG 334 Query: 288 SPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 L A V +E LR+ ++ LG + EL L+ Sbjct: 335 RAALFGMAAGGERGVTNVLEILRQGVSETLLGLGHASLHELSPEDILV 382 >gi|319763727|ref|YP_004127664.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] gi|317118288|gb|ADV00777.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC] Length = 398 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 117/367 (31%), Gaps = 75/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ F ++ R L ++S +VE G++ S P I+ M G N Sbjct: 45 AEDNTSLRDNREVFGEYGFATRVLRDVSRR--SQAVELFGQRYSSPFGIAPM-GINALST 101 Query: 73 ERINRNLAIAAEKTKV-------------------------AMAVGSQ--RVMFSDHNAI 105 R + LA AA++ + A G Q D A Sbjct: 102 YRGDLVLARAAQQAGIVSIMSGTSLIPMEEVARESPATWFQAYIPGDQERIDALVDRVAR 161 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQA----------VHVLGADGLFLHLN 154 F + +N ++ + ++ + + V L H Sbjct: 162 AGFGTLVVTVDIPVSANRENNIRTGFSTPLRPSLRLAWDGMVRPRWVAGTFLRTLLRHGM 221 Query: 155 PLQE---------IIQPNGNTNF--ADLSS--KIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ + +F D + I + PL++K + LS D Sbjct: 222 PHFENSFATRGAPIVSSSVLRDFSARDHLNWGHIEAIRRRWKGPLVVKGL---LSVEDAL 278 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG S + + + Sbjct: 279 QARRVGADAVVLSNHGGRQLDSAISPLRVLEAV-----------------VAAVGPDYPV 321 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ LGA + + PF A+ V AI L++E +M +LG Sbjct: 322 LIDSGFRRGSDVLKALALGARMVLVGRPFNYAAAVAGEAGVAHAIGLLQEEVDRNMAMLG 381 Query: 321 TKRVQEL 327 EL Sbjct: 382 VTGCAEL 388 >gi|111022181|ref|YP_705153.1| dehydrogenase [Rhodococcus jostii RHA1] gi|110821711|gb|ABG96995.1| possible dehydrogenase [Rhodococcus jostii RHA1] Length = 428 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I L S +P+LLK V L D L +G+ ++ GG S D Sbjct: 284 WADIETLRSRTSLPILLKGV---LHPDDARRALDAGVDGIVVSNHGGRQVDGSVSSLDAL 340 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI V + G+R G D+ K++ LGA L P L Sbjct: 341 VDIAPV-----------------VAGRLTLLLDSGIRTGADVFKALALGADAVTLGRPHL 383 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ A ++ EF ++M L G V E+ Sbjct: 384 YGLALAGQAGARDAAANVIAEFDLTMGLSGLTSVAEI 420 >gi|302346024|ref|YP_003814377.1| dehydrogenase, FMN-dependent [Prevotella melaninogenica ATCC 25845] gi|302149807|gb|ADK96069.1| dehydrogenase, FMN-dependent [Prevotella melaninogenica ATCC 25845] Length = 316 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 109/325 (33%), Gaps = 68/325 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GGNNKMIER 74 N+ + D H+ R I E G++ P+++ + + GG M+E Sbjct: 30 NRNYLDSIHVEMRV---IDAVEPTLKTVIFGEEFDSPIMMPAFSHLNKVLKGGKKPMLEY 86 Query: 75 INRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL------G 124 A AA+K V M + V + A ++ +A H +++ + G Sbjct: 87 -----ARAAKKLNTVNWVGMEPNEEYVEIAAEGARTVRIIKPFADHNIILDEIQFAIKHG 141 Query: 125 AVQLNYDFG-VQKAHQAVHVLGADGLF-LHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 A+ + D V V+ L + L+ L+E ++ G Sbjct: 142 AIAVGVDIDHVPGTDGKYDVVDGIPLGPVTLSDLKEYVKAAG------------------ 183 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT-SWSRIESHRDLESDIGIVFQDW 241 ++P + K V LS D ++G ++ G + + I + Sbjct: 184 NIPFVAKGV---LSVQDALKCKEAGCAAILVSHHHGRIPFGVAPVM--VLPKIKAALEGS 238 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDA 300 GI G+ G D K++ LGA + LKP + ++ Sbjct: 239 GI----------------AIFVDCGIDTGYDAYKALALGADAVAVGRGILKPLLQQGAEG 282 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQ 325 V ++ + ++ M K ++ Sbjct: 283 VEEKVQKMNEQLSELMMYTCVKDIR 307 >gi|21219287|ref|NP_625066.1| oxidoreductase [Streptomyces coelicolor A3(2)] gi|256789677|ref|ZP_05528108.1| oxidoreductase [Streptomyces lividans TK24] gi|289773567|ref|ZP_06532945.1| oxidoreductase [Streptomyces lividans TK24] gi|6468243|emb|CAB61541.1| putative oxidoreductase [Streptomyces coelicolor A3(2)] gi|289703766|gb|EFD71195.1| oxidoreductase [Streptomyces lividans TK24] Length = 389 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 22/177 (12%) Query: 151 LHLNPLQEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H +P ++ G ++ A +A L D P++LK V L D L +G+ Sbjct: 221 VHEDPNAAVMHFVGMFSDPAKSWPDLAFLRENWDGPIVLKGV---LHPDDARLAADAGMD 277 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + + D + + + G+R Sbjct: 278 GVVVSNHGGRQVAGSVAAADALPRVAE-----------------AVGDRLTVLFDSGVRT 320 Query: 270 GVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+ K++ LGA L P++ +D V I L E +++ L G Sbjct: 321 GDDVFKALALGARAVLLGRPYVYGLGLDGRPGVEHVIRCLLAELDLTLALSGHASPA 377 >gi|330816557|ref|YP_004360262.1| MdlB [Burkholderia gladioli BSR3] gi|327368950|gb|AEA60306.1| MdlB [Burkholderia gladioli BSR3] Length = 384 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 107/363 (29%), Gaps = 71/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + G+ RN+ F + R L + + S LG++L+ P +++ Sbjct: 30 AEDERGLRRNRDAFARLAFVPRRL--VDVASRELSTTLLGQRLAAPFVLAPTGLNGLIWP 87 Query: 65 ------------TGGNNKMIERINRNLAIAAEKTK------VAMAVGSQRVMFSDHNAIK 106 G M N +L A + + + ++ A Sbjct: 88 QGDIALARAAQRAGIPFAMSTASNVSLERLAGEAGGELWFQLYVMHRELTDSLAERAARA 147 Query: 107 SFELRQYAPHTVLIS-------NLGAVQLNYDFGV-----------QKAHQA--VHVLGA 146 + L N A+ L G+ +A V L Sbjct: 148 GYRTLVVTVDVPLNGKRERDLRNGFALPLRPSPGLLLDTLRHPRWSAALLRAGGVPTLAN 207 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 G H + + + + + L LL+K + L + D L+ Sbjct: 208 VGADDHASVEVKAALLRRQMDASFNWHDLRRLRDRWPHRLLVKGI---LGTDDALACLEL 264 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASG 265 G+ ++ G + D+ + AR C + Sbjct: 265 GVDGVILSNHGARQLDDAVAPIDM------------------IAAARHACERRGALLLDS 306 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G DI K++ LGA L L A V IE L E ++ +LG + V Sbjct: 307 GIRRGSDIAKALALGADAVMLGRAVLYGLAAAGEAGVTRVIEILGDELDRTLAMLGCRGV 366 Query: 325 QEL 327 +L Sbjct: 367 ADL 369 >gi|254501302|ref|ZP_05113453.1| FMN-dependent dehydrogenase superfamily [Labrenzia alexandrii DFL-11] gi|222437373|gb|EEE44052.1| FMN-dependent dehydrogenase superfamily [Labrenzia alexandrii DFL-11] Length = 390 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 L + + LK + +S D + + G ++ GG S D Sbjct: 243 WKDAEELCAKWNGQFALKGI---MSVEDAKRAVDIGCTGIMVSNHGGRQLDGSRSPFDQL 299 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++I ++ I GG++ G +LK++ +GA +L Sbjct: 300 AEI-----------------VDAVGDKIDVICEGGIQRGTHVLKALSVGAKACSGGRLYL 342 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V A+ +LR E M L+G + +L R Sbjct: 343 YALAAAGQPGVERALGNLRTEIERDMKLMGITSLDQLSRENLRFR 387 >gi|119714547|ref|YP_921512.1| (S)-2-hydroxy-acid oxidase [Nocardioides sp. JS614] gi|119535208|gb|ABL79825.1| (S)-2-hydroxy-acid oxidase [Nocardioides sp. JS614] Length = 410 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 102/360 (28%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F D L VD S E LG + S P I+ TG M Sbjct: 58 ADDEISLARARQAFRDVQFNPGVL--RDVSSVDTSREVLGARASLPFGIAP-TGFTRLMH 114 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-FSD-----HNAIKSFEL------RQYAPHTVLI 120 A AA + A+ + D + F+L + Sbjct: 115 TEGEVAGATAAAAAGIPFALSTMGTTSIEDVAAAAPSGRHWFQLYMWKDRDRSMALVERA 174 Query: 121 SNLGAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS------- 172 + G L V A + V + L P + + DL Sbjct: 175 ARAGFDALLVTVDVPVAGARLRDVRNGMTIPPTLTPRTVLDAIPRMRWWFDLLTTEPLAF 234 Query: 173 ------------------------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 +A + L++K + + D G Sbjct: 235 ATLDSWSGTVAELLDTMFDPTVTFEDLAWIKEQWPGRLVVKGIQ---TVDDARRVADLGA 291 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L ++ + + G+ Sbjct: 292 DAVLLSNHGGRQLDRAPIPFRLLPEV-----------------VAAVGQDVEVHLDTGIM 334 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ ++ GA + +L M D V A+E LR + +M LLG + + +L Sbjct: 335 SGQDIVAALAHGARFTLVGRAYLYGLMAGGRDGVDRAVEILRSQVERTMRLLGVRSLGDL 394 >gi|163732147|ref|ZP_02139593.1| L-lactate dehydrogenase, putative [Roseobacter litoralis Och 149] gi|161394445|gb|EDQ18768.1| L-lactate dehydrogenase, putative [Roseobacter litoralis Och 149] Length = 385 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 101/362 (27%), Gaps = 75/362 (20%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + RN+ D L L D +FLG + P I+ + G + M Sbjct: 36 EATQRRNRSALDWIGLHPSILHGEFT--PDLGTQFLGVERPLPFGIAPV-GMSGLMWPDA 92 Query: 76 NRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKSF----------ELRQYAPHTVLISN 122 +LA AA + ++ + V SQ + +R + Sbjct: 93 EGHLARAAARAQIPYSLSTVASQSPEDVAPHLGPDAWFQMYPPRDQAIRTDMLKRARAAG 152 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGA---------DGLFLHLNPLQEIIQP-NGNTNFADL- 171 + L D V + G + P G L Sbjct: 153 FSTLVLTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVATTPAWAWGMAQRGMPRMRGLE 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 ++ L A D +LK V L + D + Sbjct: 213 KYTPKTESALSSTQHAGYLLRTSPDWEYVSWLRDAWDGAFVLKGV---LRARDAQPLKSR 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ G + + D +L R + I G Sbjct: 270 GVDAIWVSNHAGRQFDAAPASID------------------ALREIRAA-TDLPLIFDSG 310 Query: 267 LRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + G+DIL++ GA L F A V IE L K+ +M LG + ++ Sbjct: 311 IEGGLDILRAYACGADFVMLGRAFHYALAALGPIGVDHLIEILTKDIEANMGQLGARTIR 370 Query: 326 EL 327 EL Sbjct: 371 EL 372 >gi|83951143|ref|ZP_00959876.1| L-lactate dehydrogenase, putative [Roseovarius nubinhibens ISM] gi|83839042|gb|EAP78338.1| L-lactate dehydrogenase, putative [Roseovarius nubinhibens ISM] Length = 387 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 103/371 (27%), Gaps = 73/371 (19%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + N F + L R + + +G+ +S P+ ++ + G Sbjct: 33 EQTFRANTTDFSELLLRQRI--AVDMGNRTTRTQMIGQDVSMPVALAPV-GVTGMQCADG 89 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLGAVQ 127 A AAE V + + + + A + + L+ L A Q Sbjct: 90 EIKAARAAEAFGVPFTLSTMSICSIEDVAEHTEKSFWFQVYTLKDDDFMQRLFDRAKAAQ 149 Query: 128 LNY-------------DFGVQKAHQAVHVLGADGLF-LHLNPLQEIIQPNGNTNFAD--- 170 + ++ A L + + + F Sbjct: 150 CSAAMITVDLQVLGQRHKDIKNGLSAPPKLTPKTVANMMTKVHWGLGMLGTKRRFFGNIV 209 Query: 171 ------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +I D PL++K + + D L Sbjct: 210 GHAKGVTDPSSLSSWTAEAFDVSLDWDRIRTFRKMWDGPLIIKGI---IDERDALEALNV 266 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG S I + + G Sbjct: 267 GADAIIVSNHGGRQLDGALSAIRALPRIMD-----------------AVGDRIEVHLDSG 309 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+LK++ +GA + F+ +A V A+E + KE VSM G + ++ Sbjct: 310 IRSGQDVLKAVAMGAKGTYIGRAFVYGLGAMGEAGVTRALEVIHKELDVSMAFCGHRDIK 369 Query: 326 ELYLNTALIRH 336 + + +I Sbjct: 370 TVDRDILMIPR 380 >gi|294083641|ref|YP_003550398.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663213|gb|ADE38314.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] Length = 403 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 106/354 (29%), Gaps = 72/354 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI 81 N + D+ L+ R L + E + S LG++ P I+ M G + +R +A Sbjct: 54 NSRALDEIRLMPRVL--VDVAERNLSCRILGQETGLPFGIAPM-GMCSLSWPGADRYMAR 110 Query: 82 AAEKTKVAMAVGSQRV-----MFSDHNAIKSFELR-----QYAPHTVLISNLGAVQ---L 128 A + + V + + D F+L + + + + + L Sbjct: 111 EAAARRFPLCVSTASSATLEQIIEDAEGHAWFQLYADQSGDFVDELIERAKVSGYEVLIL 170 Query: 129 NYDFGVQKAHQ------------------------------AVHVLGADGLFLHLNPLQE 158 D + V A G+ +N + Sbjct: 171 TVDVPIPSVRTRDLRNGFTFPMQWGPRQIWDFATHPLWSLATVANSFAAGMPRPMNYVTS 230 Query: 159 IIQPNGNTNFADLSSK---IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 N + + + +L L++K V C D G ++ Sbjct: 231 SFGTKFVRNASRGRANWSFLEMLRDRWLGKLVVKGVQC---PQDALQIKAMGADAIYVSN 287 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDIL 274 GG + T SL R + I GG+R+G ++ Sbjct: 288 HGGRQLNAAP------------------TTIESLVAIRKAVGSTMPLIFDGGIRSGEHVI 329 Query: 275 KSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ GA+ L + + + ++ + E M L+G K V E+ Sbjct: 330 KALASGANFAMLGRGAMYGIGAAGASGLSDILDVISSEASSVMGLIGHKSVTEI 383 >gi|114764411|ref|ZP_01443637.1| putative L-lactate dehydrogenase [Pelagibaca bermudensis HTCC2601] gi|114543165|gb|EAU46183.1| putative L-lactate dehydrogenase [Roseovarius sp. HTCC2601] Length = 423 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 26/174 (14%) Query: 159 IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 ++ +F+ +++ + L+LK + L D +G ++ Sbjct: 239 LLSSRAVRDFSGRERLSWAQVEQVRREWTGKLVLKGI---LHPQDAIRARDTGADAIVVS 295 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + +L + + GG G DIL Sbjct: 296 NHGGRQLDHA------------------LSPMRALPRVVAAVPDMPVMIDGGFWRGTDIL 337 Query: 275 KSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K++ LGA+ L PF A + V AI L E M +LG + E+ Sbjct: 338 KALGLGAAFVFLGRPFNYAATVAGQPGVDHAIRLLVNELRADMGMLGLTTIPEM 391 >gi|115396878|ref|XP_001214078.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193647|gb|EAU35347.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 405 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 21/163 (12%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ L P++LK + D + L++G ++ GG + Sbjct: 248 PHTWEEVDFLRKHWKGPIVLKGIQH---VDDAKRALETGCEGLVVSNHGGRQVDGAIASL 304 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D +I ++ + G+R G DI+K++ LGA +A Sbjct: 305 DALPEI-----------------VDAVGDKMTVMFDSGIRTGADIMKALCLGAKAVMVAR 347 Query: 289 PFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 P + A+D + IE + SM L G + + + + Sbjct: 348 PIMYGLAIDGKRGAKSVIEGFLADLWQSMGLAGMETLADCRRD 390 >gi|72144580|ref|XP_795057.1| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Strongylocentrotus purpuratus] gi|115965120|ref|XP_001195827.1| PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase [Strongylocentrotus purpuratus] Length = 353 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 100/313 (31%), Gaps = 69/313 (22%) Query: 24 KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD + + R L +I + S LG+ +S P+ ++ ++ A AA Sbjct: 46 AAFDRYVIRPRILRDI--TQRSLSTTVLGQPISMPICVAPTA------AQQFAHPDAEAA 97 Query: 84 EKTKVA-------MAVGSQRVMFSDHNAIKS---------FELRQYAPHTVLISN---LG 124 A M+ + + A F+ R+ A H V + Sbjct: 98 SAKGTADSGTLFIMSSFANASIAEVSRAAPGGLRWMQLYLFKDRRLAEHVVKEAEREGFK 157 Query: 125 AVQLNYDFGV---------QKAHQA-----VHVLGADGLFLHLNPLQEIIQPNG------ 164 A+ L D + A A L L + + + + I+ Sbjct: 158 AIVLTVDLPLWGDYSFYKSSHATSASRYYHDPSLRPTNLAIDIPEVHDAIRSGDVNIRHY 217 Query: 165 ---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + I L S +P++LK + L+ +G+ ++ GG Sbjct: 218 LAQQYDAPKTWDDITWLKSITSLPIVLKGI---LTGEAAMEAADAGVSGIIVSAHGGRHM 274 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + D+ +++ + G + GG+R+G D LK++ LGA Sbjct: 275 DGVPAPIDVLAEVVSAVKGRG----------------VEVYMDGGVRSGTDALKALGLGA 318 Query: 282 SLGGLASPFLKPA 294 + P L Sbjct: 319 RAVLIGRPALWGL 331 >gi|116180260|ref|XP_001219979.1| hypothetical protein CHGG_00758 [Chaetomium globosum CBS 148.51] gi|88185055|gb|EAQ92523.1| hypothetical protein CHGG_00758 [Chaetomium globosum CBS 148.51] Length = 421 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D P++LK V LS D E+ +++G+ ++ GG ++ +I Sbjct: 278 DGPIVLKGV---LSVGDAEMAVRAGVDGIVVSNHGGRQLDGAVPALEMLPEI-------- 326 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAV 301 + + G+R G D+LK++ LGA + P + + S+ Sbjct: 327 ---------VDAVGDRLTVLYDSGVRTGADVLKALALGAKAVLVGRPVIYGLGIAGSEGA 377 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + L + SM L G + V EL + Sbjct: 378 RHVLAGLLADVDQSMGLAGVQNVSELNRS 406 >gi|206560132|ref|YP_002230896.1| putative L(+)-mandelate dehydrogenase [Burkholderia cenocepacia J2315] gi|198036173|emb|CAR52068.1| putative L(+)-mandelate dehydrogenase [Burkholderia cenocepacia J2315] Length = 388 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 70/375 (18%), Positives = 125/375 (33%), Gaps = 76/375 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + D N+ FD++ R L + + +VE G++ + P I+ M G + Sbjct: 31 AEDNRTRDDNRAVFDEYGFATRVL--RNVSQRQQTVELFGRRYASPFGIAPM-GIHALST 87 Query: 73 ERINRNLAIAAEKTKVA-MAVGSQRVMFS-----------------DHNAIKSF--ELRQ 112 R + LA AA++ +A + GS + D + I + + + Sbjct: 88 YRGDIVLARAAQRAGIASIMSGSSLIPLEEVAAAAPGTWFQAYLPGDPDRIAALLERVAR 147 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLN 154 T++I+ V N + V+ + + A L H Sbjct: 148 AGYRTLVITVDIPVSANRENNVRTGFTTPLRPGPRLFWDGITRPRWLAGTFARTLLAHGM 207 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ +F+ + + L++K + LS D Sbjct: 208 PHFENSFATRGAPILSSTVLRDFSARDHLDWGHLKRIRQEWKGELVIKGI---LSVDDAV 264 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G ++ GG S + D+ R + Sbjct: 265 IARDIGADGIILSNHGGRQLDGAVSPMRILPDV-----------------VRALGADYPV 307 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G R G D+LK++ +GA + + PF A+ V+ AI LR E +M +LG Sbjct: 308 MIDSGFRRGSDVLKAVAMGARMVFVGRPFNYAAAVAGQAGVLHAIGLLRDEVDRNMAMLG 367 Query: 321 TKRVQELYLNTALIR 335 + L LIR Sbjct: 368 VGQCSAL-TPDVLIR 381 >gi|317145806|ref|XP_001821078.2| membrane dipeptidase GliJ [Aspergillus oryzae RIB40] Length = 604 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 21/154 (13%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 I + + + + +K + C D+ + G+ I+ GG + + Sbjct: 77 KRWDEVIPWVKANTSLEVWVKGISC---PYDVLKAIDYGLDGLVISSHGGRQLDGVAAAI 133 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ ++ + + G+R G D+ +++ LGA + L Sbjct: 134 DVLAECAPL-----------------AKGRIKIGFDSGIRRGADVFRALALGADICFLGR 176 Query: 289 -PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 P A D V A+ L +E +M G Sbjct: 177 IPLWGLAYDGQAGVELAVRILEEELRNTMAHAGC 210 >gi|134100844|ref|YP_001106505.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|291008643|ref|ZP_06566616.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] gi|133913467|emb|CAM03580.1| L-lactate dehydrogenase [Saccharopolyspora erythraea NRRL 2338] Length = 425 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 116/371 (31%), Gaps = 88/371 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ RN + L AL E + V+ GK+++ PL+ + TG M Sbjct: 69 AEEEITAARNIAAYRRVTLRPDALHP--VAEPELGVDLFGKRIAMPLVFAP-TGYTRMMH 125 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 +A AE V ++ + + ++R AP L L + N Sbjct: 126 HHGEAAVARVAEHFGVPYSLSTVGTTSIE-------DVRAAAPGGDLWFQL--YRTNDPA 176 Query: 133 GVQKAHQAVHVLGADGLFLHLNP------LQEIIQP-------------NGNTNFADLSS 173 + G + L ++ L++++ N + A + Sbjct: 177 TNELLVSRAEAAGYSTMLLTVDTSVAGKRLKDVVNGLTIPPTLTARTILNISMFPAWWYN 236 Query: 174 KI------------------------------------ALLSSAMDVPLLLKEVGCGLSS 197 K+ L LL+K + + Sbjct: 237 KLTTPGIGFASLSGVEGNLSSEDVARTLFDPGLDFAALEWLRERWPGKLLVKGIT---TP 293 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 ++ G ++ GG R + D+ +P + Sbjct: 294 ESAREVVRRGADGVVVSNHGGRQLDRSAATLDV------------LPAVRA-----AVGA 336 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSM 316 EA I GG+R+G DI+ + LGA + +L M D V A E L E+ M Sbjct: 337 EATVIIDGGIRHGQDIVAARALGADAAMVGRAYLYGIMAGGQDGAVRAYEILADEYQRCM 396 Query: 317 FLLGTKRVQEL 327 LLG +R ++L Sbjct: 397 QLLGVRRSEDL 407 >gi|149204194|ref|ZP_01881162.1| L-lactate dehydrogenase (cytochrome) [Roseovarius sp. TM1035] gi|149142636|gb|EDM30681.1| L-lactate dehydrogenase (cytochrome) [Roseovarius sp. TM1035] Length = 382 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 28/166 (16%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D + L A D P ++K V G D + K G I+ G + Sbjct: 235 RTSPDWDY-LRWLRDAWDGPFVVKGVLRG---DDAAMLEKEGADAIWISNHAGRQFDAAP 290 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + T +L R I GG+ G+D+L++I LGA Sbjct: 291 A------------------TIEALPEVRAATT-LPVIMDGGIEGGLDVLRAIALGADFVM 331 Query: 286 LAS---PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + L +S A + L ++ +M LGT+ + ++ Sbjct: 332 MGRGWHYALGALGESGPA--HLADILAEDLRANMGQLGTRTLWDVR 375 >gi|319442472|ref|ZP_07991628.1| L-lactate dehydrogenase [Corynebacterium variabile DSM 44702] Length = 417 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 104/369 (28%), Gaps = 86/369 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + R ++ F+D L +D + E LG + P I+ TG M Sbjct: 59 AEGEISLARARRAFEDVEFHPSIL--RDASHIDTTTEILGGTSALPFGIAP-TGFTRLMQ 115 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 A AA ++ + + + ++R P L V + D Sbjct: 116 TEGEIAGAGAAASARIPFTLSTLGTTSIE-------DVRATNPAGRNWFQL-YVMKDRDI 167 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL-----LSSAMDVPLL 187 +A G D LF ++ + N + S + A+ P Sbjct: 168 SYGLVERAAQA-GYDTLFFTVDTP---VAGNRMRDTRHGFSIPPQLTAKTILDAIPRPWW 223 Query: 188 L-----------------------------------KE-------------VGCGLSSMD 199 K+ V + D Sbjct: 224 WIDFLTTPPLEFASLSSTGGTVGELLDSAMDPTINFKDLEIIREMWPGKIAVKGVQNVED 283 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ GG R L S+ A ++ Sbjct: 284 SVTLAELGVDAVVLSNHGGRQLDRAPVPFQLLP---------------SVRDA--VGDDM 326 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 + I G+ NG DI+ ++ LGA + +L M + V I L+ + +M L Sbjct: 327 ELIVDTGIMNGADIVAAMALGADFTLIGRAYLYGLMAGGREGVDRTISILQSQIERTMKL 386 Query: 319 LGTKRVQEL 327 L + EL Sbjct: 387 LQVNTIGEL 395 >gi|84489476|ref|YP_447708.1| glutamate synthase subunit 2 [Methanosphaera stadtmanae DSM 3091] gi|84372795|gb|ABC57065.1| putative glutamate synthase, subunit 2 with ferredoxin domain [Methanosphaera stadtmanae DSM 3091] Length = 492 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 69/393 (17%), Positives = 131/393 (33%), Gaps = 80/393 (20%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-----PSVEF-LG----- 52 RK + + G R FDD ++ ++S +D E LG Sbjct: 101 QRKSSTGSYKVRGCGATRIVPTFDDLSILP---AQVSRPPIDSYREPCKTEVVLGDRFAE 157 Query: 53 --KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---- 106 K+ P++I +M+ G +I + A A A G ++ + + Sbjct: 158 NPLKIDTPIMIGAMSFGAISKEAKI--SFARGATLAGTASNTGEGGMLPEERHYADKLIA 215 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNPLQ--EIIQ 161 + ++ ++N AV++ G + H + A+ + N Q + + Sbjct: 216 QYASGRFGMSANYLNNAEAVEIKIGQGAKSGMGGHLLAKKVTAEVARIR-NIPQGTDALS 274 Query: 162 PNGNTNFADLSS---KIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 P + + KI L + VP+++K G D+++ K+G I G Sbjct: 275 PARHMDIVGPEDLGMKIDQLRDITDWKVPIIVKFTA-GRVEQDVKIAAKAGADIIVIDGM 333 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF------IASGGLRNG 270 G + + E + GIPT ++ A E +A+GG+R+G Sbjct: 334 QGGTGAGPEVITEHS----------GIPTIQAIMEADTALKEVNLRTEVSLVAAGGIRSG 383 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D+ K+I LGA + + L + Sbjct: 384 ADVAKAIALGADATYIGTAALVSIGCKVCKACSKGKCPKGIATQDRMLRRRLDPVRGGQR 443 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 V I+++ E + G +Q+L + Sbjct: 444 VANYIKAMTAEAKMLTQQAGNTDIQKLEKEDLV 476 >gi|317402310|gb|EFV82887.1| hypothetical protein HMPREF0005_00144 [Achromobacter xylosoxidans C54] Length = 385 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 54/158 (34%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L L++K V L D++ + G ++ GG Sbjct: 239 LDDLARLREGWQGKLIVKGVVNAL---DVDAIVAIGADALVVSNHGGRQL---------- 285 Query: 232 SDIGIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 D GI T +L + GG+R G DI K++ LGA+ Sbjct: 286 --------DTGIATLAALPEVIAAARGRVPVLLDGGVRRGSDIFKALALGAAGVLTGRAT 337 Query: 291 LKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L + A+E LR E +M L G + + + Sbjct: 338 LYGVLAGGHPGACKALEILRDELARTMQLCGAETLAAI 375 >gi|19114911|ref|NP_593999.1| cytochrome b2 (L-lactate cytochrome-c oxidoreductase) (predicted) [Schizosaccharomyces pombe 972h-] gi|74624463|sp|Q9HDX2|YKN3_SCHPO RecName: Full=Uncharacterized lactate 2-monooxygenase PB1A11.03 gi|12038982|emb|CAC19728.1| cytochrome b2 (L-lactate cytochrome-c oxidoreductase) (predicted) [Schizosaccharomyces pombe] Length = 407 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 37/181 (20%) Query: 158 EIIQPNGNTNFADL--------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 E FA + + L D P++LK + ++ D + ++ G++ Sbjct: 238 EENMLEAAKEFAGIVFPGISHDWEDLKFLRKHWDGPIVLKGI---MNVPDAKKAVEYGMQ 294 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM----ARPYCNEAQFIASG 265 ++ GG SL M ++ + Sbjct: 295 GIVVSNHGGRQQDGG---------------------VASLTMLPKIVDAVGDKLDVLFDS 333 Query: 266 GLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R+G DI K++ LGA + + P++ A++ S V I L + +++ L G V Sbjct: 334 GVRSGADIAKALALGAKMVLIGRPYVYGLALEGSSGVSHVIRCLLGDLELTLHLSGIVSV 393 Query: 325 Q 325 + Sbjct: 394 K 394 >gi|99081866|ref|YP_614020.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] gi|99038146|gb|ABF64758.1| L-lactate dehydrogenase (cytochrome) [Ruegeria sp. TM1040] Length = 389 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 68/379 (17%), Positives = 115/379 (30%), Gaps = 90/379 (23%) Query: 15 KDPGIDRNKKFFDDWHLIHRAL--PEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNK 70 ++ RN+ D L+ L P+ EVD G L P I+ M+G Sbjct: 38 REATQARNRLCLDRIGLMPAILGGPQ----EVDLGTTLFGTPLPRPFGIAPVGMSGLIWP 93 Query: 71 MIERINRNLAIAAEKTKVAMA---VGSQRVMFSDHN--AIKSFE--------LRQYAPHT 117 E +LA A +T + V SQ + A F+ +R+ Sbjct: 94 DAE---GHLARHAAQTNIPYGLSTVASQSPEDLAPHLGAQGWFQMYPPKDEGIRKDMLER 150 Query: 118 VLISNLGAVQLNYDFGVQ---------------------KAHQAVHVLGADGLFL----- 151 + + L D V A A+ A G+ Sbjct: 151 ARAAGFKVLVLTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVAIRPAWALGMARQHRGE 210 Query: 152 ----HLNPLQEIIQPNGN------------TNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 H+ L + I+ + D + + L + PL++K V L Sbjct: 211 GGMPHMRTLDKYIEGAASALSSTAHIGYLLRTAPDWAY-LEWLRDHWEGPLVVKGV---L 266 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + D +G I+ G + + ++ DI Sbjct: 267 DACDAPRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDI-------------------RA 307 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIV 314 I G+ G+DIL+++ LGA L + A A + + L K+ Sbjct: 308 ATTLPLILDSGIEGGLDILRALALGADFVMLGRAWHYALAALGAAGPAHLHDILSKDLTA 367 Query: 315 SMFLLGTKRVQELYLNTAL 333 +M LG + + E+ L Sbjct: 368 NMGQLGIRTLAEVRDLKRL 386 >gi|226364674|ref|YP_002782456.1| FMN-dependent dehydrogenase [Rhodococcus opacus B4] gi|226243163|dbj|BAH53511.1| putative FMN-dependent dehydrogenase [Rhodococcus opacus B4] Length = 428 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I L S +P+LLK V L D L +G+ ++ GG S D Sbjct: 284 WADIETLRSRTSLPILLKGV---LHPDDARRALDAGVDGIVVSNHGGRQVDGSVSSLDAL 340 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI V + G+R G D+ K++ LGA L P L Sbjct: 341 VDIAPVVDG-----------------RLTLLLDSGIRTGADVFKALALGADAVTLGRPHL 383 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ A ++ EF ++M L G V E+ Sbjct: 384 YGLALAGRAGARDATANVIAEFDLTMGLSGLTSVAEI 420 >gi|171060529|ref|YP_001792878.1| L-lactate dehydrogenase (cytochrome) [Leptothrix cholodnii SP-6] gi|170777974|gb|ACB36113.1| L-lactate dehydrogenase (cytochrome) [Leptothrix cholodnii SP-6] Length = 390 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 109/361 (30%), Gaps = 77/361 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ F L R ++ + +V+ +G P+ I+ + TG Sbjct: 33 ESTYRANESEFQKIKLRQRV--AVNMENRSTAVKMIGIDARMPVAIAPVGLTG-MQHADG 89 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQYAPHTVLISNLGA 125 I+ A AAEK + + + + + A + + +R +I A Sbjct: 90 EIHA--ARAAEKFGIPFTLSTMSICSIEDIAQNTTAPFWFQLYMMRDRDAMARMIERCRA 147 Query: 126 V---QLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTN-FAD 170 L +Q Q L + + L P + + F + Sbjct: 148 AKCSALVLTLDLQVIGQRHKDLKNGLTAPPRPTLKNIINLMTKPRWCLGMAGTRRHTFRN 207 Query: 171 LSSKI--------------------------ALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 L + A + + L+LK + D L + Sbjct: 208 LVGHVKGVSNMRSLSAWTNEQFDPTLSWADVAWVKAQWGGKLILKGIQ---DVEDARLAV 264 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 SG ++ GG S + I + + Sbjct: 265 ASGADAIVVSNHGGRQLDGALSSIEALPAI-----------------VEAVGDRIEVWMD 307 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GG+R+G D+LK+ LGA + + +A V A+E L KE V+M G + Sbjct: 308 GGIRSGQDVLKAWALGARGTMIGRAMVYGLGAMGEAGVTKALEILHKELDVTMAFCGHTK 367 Query: 324 V 324 + Sbjct: 368 L 368 >gi|297158186|gb|ADI07898.1| (S)-2-hydroxy-acid oxidase [Streptomyces bingchenggensis BCW-1] Length = 354 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 48/335 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D D + +D L+ L V LG +++ P+L++ M G + Sbjct: 40 AGRDVTRDEGLRDWDALRLLPHMLRR--VSGVATRTTVLGTEVATPVLVAPMAG---QEY 94 Query: 73 ERINRNLAIAAEKTKVAMAVG------SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 + +A +G S+ + A +++ + V Sbjct: 95 AHPDGEQEMAKGAAGAGSLLGVTTWTASRFESIAASGAPWWYQVYVMRDRGLTAE---LV 151 Query: 127 QLNYDFGVQKAHQAVHV--------------LGADGLFLHLNPLQEIIQPNGNTNFADLS 172 + D G + V V L ++L + + + Sbjct: 152 RRAVDHGARALLFTVDVPVLGRRGDNNRAANLDPTVSLVNLESPRAVPREEVQMEPDLTP 211 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I L +P+L+K V L + D ++ + G ++ GG R + Sbjct: 212 DLIGWLHEISGLPVLVKGV---LRADDAKVVVDHGGAGVVVSTHGGRQLDRSVTSASALP 268 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + G + A G+R G I ++ LGA + P L Sbjct: 269 RVAEALAGTG----------------VEVYADSGVRRGEHIAAALALGARAVFVGRPALW 312 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A + + V A++ L E +M LLG + Sbjct: 313 GLATEGAAGVQEAVDRLTAELAHTMTLLGVETPAA 347 >gi|332975716|gb|EGK12600.1| lactate 2-monooxygenase [Desmospora sp. 8437] Length = 449 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 25/174 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +++ + NT+F ++ + +P+LLK V D L ++ G+ ++ Sbjct: 288 AVKKALDEGNNTHFTW--KELERIKQQTPLPVLLKGVTH---PDDAVLAVEHGVDGIIVS 342 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDI 273 GG + T +L + + I G+R G DI Sbjct: 343 NHGGRQLDGAVA------------------TLEALPSICDAVREKVPVILDSGVRRGADI 384 Query: 274 LKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LK++ LGAS + PF A+ V + +E+L E + + + G ++E Sbjct: 385 LKAVSLGASATLIGRPFAYALAVAGKMGVESVLENLIAETELQLGISGRGSIRE 438 >gi|269218477|ref|ZP_06162331.1| L-lactate dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211588|gb|EEZ77928.1| L-lactate dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332] Length = 421 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A++ S D +++K V + D + +G+ ++ GG R L Sbjct: 260 DDLAVIRSMWDGKIVVKGVQ---TVADAKRLADAGVDGVLLSNHGGRQLDRAPVPFHLLP 316 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + R + + G+ NG DI+ S+ LGA + +L Sbjct: 317 HV-----------------VREVGKDTAVMVDTGIMNGADIVASVALGADFALIGRAYLY 359 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M A V I LR E + +M LLG + EL Sbjct: 360 GLMAGGRAGVDRTIAILRDELVRTMKLLGVSSIAEL 395 >gi|119501128|ref|XP_001267321.1| L-lactate dehydrogenase [Neosartorya fischeri NRRL 181] gi|119415486|gb|EAW25424.1| L-lactate dehydrogenase [Neosartorya fischeri NRRL 181] Length = 436 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 103/361 (28%), Gaps = 79/361 (21%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM---------------- 64 N++ F ++ R L + + D + E G K+S P+ + + Sbjct: 71 ANRQAFYRHRIVPRQLVDTNLR--DTTTEIFGHKVSAPIGFAPIGINKIYHPAAEVAVAK 128 Query: 65 ------------TGGNNKMIERINRNLAIAAEKTKV---------------AMAVGSQRV 97 T G+ IE++ ++ A G + Sbjct: 129 VAHELNLLYCLSTAGSTP-IEKVGEANGSGPRFYQLYMPHDDELTLSLLNRAWKSGFDVL 187 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNP 155 M + + A L V ++ +A + D L Sbjct: 188 MLTTDTWQLGWRHDDVANSNYAFYRGIGADLGLTDPVFQKRCQEAGIDIEKDVLAASTKW 247 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRY 210 + + A I L P ++K + S D ++ G+ Sbjct: 248 IDSVWHGR-----AWSWETIPWLIEKWKSISGGRPFVIKGIQ---SVADARKCVEYGVDG 299 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + D +I ++ + G+R Sbjct: 300 IVVSNHAGRQVDGAIASLDALENI-----------------VDAVGDQIYIMYDSGVRGA 342 Query: 271 VDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 D++K++ LGA + ++ + V ++SL +F + M + G +++ Sbjct: 343 SDVVKALALGAKFVFVGRLWIWGLSIMGEEGVRHVMKSLLADFDILMGVGGFNSIKDFDR 402 Query: 330 N 330 + Sbjct: 403 S 403 >gi|317405142|gb|EFV85485.1| FMN-dependent dehydrogenase [Achromobacter xylosoxidans C54] Length = 382 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 99/365 (27%), Gaps = 73/365 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + + + L + LG + P ++ TG N Sbjct: 28 AEDGISLRHNVAAFGELEFVPQVLA--DVTDCHLESTVLGAAAAMPAIVGP-TGLNGLFW 84 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------------------------- 107 + +LA AA + + + + + S Sbjct: 85 PDADVHLARAAHRAGLPFVLSTASTSLLEDVRAASAGELWLQLYVQRDRRIAEHLMDRAW 144 Query: 108 ---FELRQYAPHTVLISN---------------LGAVQLNYDFGVQKAHQAVHVLGADG- 148 + + + N G + L+ + + G Sbjct: 145 HSGYTVLFLTVDVPVHGNRDHDKRNGFQLPLRPSGRLLLDLAAHPGWCWRMLRGGGPQLK 204 Query: 149 -LFLHLNPLQEIIQPN----GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + N ++I + + A I L L++K + + D Sbjct: 205 NLAVSSNAREDITEQASALSRQMDMALTWDDIDWLRRQWPGRLVIKGIQ---TLADARRA 261 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 SG+ ++ GG ++ + G + + Sbjct: 262 QASGVDGIVLSNHGGRQLECAPCPLEVLPAVAAEL---GQS--------------LEVLV 304 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G DI K++ LGA L L A + LR E ++ LLG Sbjct: 305 DGGVRRGSDIAKAVALGARGVLLGRAPLYGLAGRGPRGAGEVLAILRTELENTLRLLGRN 364 Query: 323 RVQEL 327 R+ L Sbjct: 365 RIGAL 369 >gi|302392732|ref|YP_003828552.1| ferredoxin-dependent glutamate synthase [Acetohalobium arabaticum DSM 5501] gi|302204809|gb|ADL13487.1| ferredoxin-dependent glutamate synthase [Acetohalobium arabaticum DSM 5501] Length = 471 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 121/364 (33%), Gaps = 91/364 (25%) Query: 36 LPEISFDEVDPSVEFLGK-----KLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVA 89 LP ++ + KL P+L++ M+ GG + ++ LA A+ A Sbjct: 88 LPTQDGVQIQTKTTIGPQAENPLKLELPILLAGMSYGGALSLNAKV--ALARASAMAGTA 145 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYA-----PHTVLISNLGAVQLNYDFGVQKA------- 137 G + + + + + QY +S L A+++ G Q A Sbjct: 146 TNSG-EAPLIDEEREEADYFIGQYNRGGWMNQPEQLSRLDAIEIQLGQGAQAAAPMGMSP 204 Query: 138 -------HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 QA + + +H L E+ QP +D + L VP+ LK Sbjct: 205 TQIGEDLRQAKDLEPGEKAVIHTR-LSEMKQP------SDFFEIVQQLRDEYGVPVGLKF 257 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAG-----RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 ++E+ +K+G+ Y I G GG + + D G+PT Sbjct: 258 CATHYLEQELEIAVKAGVDYVVIDGAEAGTHGGPT---------------TLQDDVGLPT 302 Query: 246 PLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS- 298 +L + + IASGGL LK++ LGA + S L + + Sbjct: 303 LYALSRAVKFLEEKGVKDRVSVIASGGLTTPGHFLKALALGADAVYIGSIALMALLQTQM 362 Query: 299 -----------------------------DAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + + ++S +E ++ + LG + +L Sbjct: 363 SKALPQEPPPQIPLYLGKFKEDLDVEEAAEHLAKFLKSCLEEMKLTAYSLGKTDLAQLNR 422 Query: 330 NTAL 333 + Sbjct: 423 KDLV 426 >gi|3435306|gb|AAC32392.1| glycolate oxidase [Medicago sativa] Length = 283 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 21/163 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K V L++ D L ++SG G + Sbjct: 125 WKDVKGLQNITSLPILVKGV---LTAEDTRLAVQSGAAGIIGPNHGARQLDYVP------ 175 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 F+ E+ + GG+ G ++ K++ LGAS + P + Sbjct: 176 -PNNKGFK----------EVVKAAQGRVPVFLDGGVPRGTNVFKALALGASGIFIGRPVV 224 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V ++ LR EF ++M L G + ++E+ + + Sbjct: 225 YSLPAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEITSDHIV 267 >gi|152965352|ref|YP_001361136.1| L-lactate dehydrogenase (cytochrome) [Kineococcus radiotolerans SRS30216] gi|151359869|gb|ABS02872.1| L-lactate dehydrogenase (cytochrome) [Kineococcus radiotolerans SRS30216] Length = 411 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 101/367 (27%), Gaps = 82/367 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-------- 64 + + R ++ F D L +VD S G S P I+ Sbjct: 58 AEGEISLARARQAFADVEFHPSIL--RDVSKVDTSTTIFGGPSSLPFGIAPTGFTRLMQT 115 Query: 65 --------------------TGGNNKMIE--------------------RINRNLAIAAE 84 T G + I+ L A Sbjct: 116 EGETAGAGAAGAAGIPFTLSTLGTTSIEHVKAANPTGRNWFQLYVMRQRDISYGLVERAA 175 Query: 85 KTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 + V + + F + + ++ L +DF Sbjct: 176 AAGFDTLMFTVDTPIAGARLRDKRNGFSIPPQLTASTVLDTLARPWWWFDF------LTT 229 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 L L + E++ + + +A + + L++K V + D Sbjct: 230 TKLEFASLTETGGTVGELLDYAMDPSI--DYDDLAEIRALWPGKLVVKGVQ---NVADSR 284 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G+ ++ GG R IP L E+ R + + Sbjct: 285 RLADLGVDGIVLSNHGGRQLDRAP-----------------IPFHLLPEVVREVGRDTEI 327 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLG 320 G+ NG D++ SI +GA + +L M V AI L + + +M LL Sbjct: 328 AIDTGIMNGADVVASIAMGARFTLVGRAYLYGLMAGGRQGVDRAIAILADQVVRTMKLLE 387 Query: 321 TKRVQEL 327 ++EL Sbjct: 388 VASLEEL 394 >gi|40713179|emb|CAE53379.1| Hmo protein [Actinoplanes teichomyceticus] gi|45580881|emb|CAG15041.1| HmO protein [Actinoplanes teichomyceticus] Length = 364 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 105/351 (29%), Gaps = 59/351 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N+ D ++ R L + +P G + + PL ++ M + + Sbjct: 36 SETTLAANRAALDRVTIVPRVL--TGGPDPEPGATLAGARSALPLAVAPMA---YQRLLH 90 Query: 75 INRNLAIAAEKT--KVAMAVGSQRV----MFSDHNAIKSFELRQYAPH------------ 116 LA A V V + + + F+L Sbjct: 91 PEGELATARAAAAAGVPFVVSTLSSVPVGELAAAGGEQWFQLYWLNDDRDTMNLVHRAED 150 Query: 117 -----------TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH--LNPLQEIIQPN 163 ++ + +F + +A +V H + +I Sbjct: 151 AGCRVLMVTVDVPVMGR-RLRDIRNEFVLPAEVRAANVASGAMSAAHDRADAGSALIAHT 209 Query: 164 GNTNFADL-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 L + + L S +P+++K + L D + G I+ GG Sbjct: 210 NRAFHPALTWAHLEALRSRTTLPIVVKGI---LDPADARRAAEIGATGVVISNHGGRQLD 266 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + +P ++ + Q G+R+G DIL+++ LGA Sbjct: 267 GAPASVTM------------LPAAVA-----AVPDTCQVFVDSGIRSGTDILRALALGAH 309 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRK-EFIVSMFLLGTKRVQELYLNTA 332 + P L + A + ++ E +M L G V TA Sbjct: 310 GVLIGRPMLWGLAAGGETGAAGVLAVLDAELRAAMRLAGCADVAAARRLTA 360 >gi|238599503|ref|XP_002394899.1| hypothetical protein MPER_05144 [Moniliophthora perniciosa FA553] gi|215464676|gb|EEB95829.1| hypothetical protein MPER_05144 [Moniliophthora perniciosa FA553] Length = 260 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 83/264 (31%), Gaps = 51/264 (19%) Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 NL AA K V + + D + P L L V + + + Sbjct: 16 NLTRAAGKHGVIQMIPTLASCSFDEI------VDAAKPDQPLFLQL-YVNRDRELTKKYV 68 Query: 138 HQAVHVLGADGLFLHLNPLQ----------EIIQPNGNTNFADLSSKIAL-------LSS 180 A G LF+ ++ Q + + +G D S I +SS Sbjct: 69 QHA-EARGVKALFITVDAPQLGRREKDMRMKFVGDDGTAKVQDGQSGIKKDQGVARAISS 127 Query: 181 AMDVPLLLKEVGCGLS-------------SMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 +D L K++ S D + G + ++ GG S Sbjct: 128 FIDPGLSWKDIPWFKSITKMAIVLKGVSTPEDALMAYDYGCQGIVLSNHGGRQLDTARSG 187 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + DI +L+ P+ GG+R D LK+I LGAS G+ Sbjct: 188 LENLVDI-----------VAALKTRGPWPNPNFSVFVDGGVRRASDALKAIALGASAVGI 236 Query: 287 ASPFLKPA-MDSSDAVVAAIESLR 309 FL D V AI+ LR Sbjct: 237 GRGFLYAFCSYGQDGVEKAIQILR 260 >gi|85703444|ref|ZP_01034548.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. 217] gi|85672372|gb|EAQ27229.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius sp. 217] Length = 382 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 24/164 (14%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D + L A D PL++K V G D K+G+ I+ G + Sbjct: 235 RTSPDWDY-LRWLRDAWDGPLVVKGVLRG---DDAAALEKAGVDAIWISNHAGRQFDAAP 290 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + T +L R I GG+ G+D+L++I LGA Sbjct: 291 A------------------TIEALPEVRAATT-LPVIMDGGIEGGLDVLRAIALGADFVM 331 Query: 286 LASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELY 328 L + + + L ++ +M LGT+ + ++ Sbjct: 332 LGRGWHYALGALGEIGPAHLADILAEDLRANMGQLGTRTLWDVR 375 >gi|86143607|ref|ZP_01061992.1| L-lactate dehydrogenase [Leeuwenhoekiella blandensis MED217] gi|85830054|gb|EAQ48515.1| L-lactate dehydrogenase [Leeuwenhoekiella blandensis MED217] Length = 383 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 116/367 (31%), Gaps = 77/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D I RN D L R L ++ + + LG + P I+ + + + Sbjct: 35 CNEDVSIQRNTSEIRDVQLQPRYL--NNYGQSSTKTKVLGMEFDAPFGIAPV---GLQGL 89 Query: 73 ERIN--RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQ------------- 112 N LA AA K + + + M + + + F+L Sbjct: 90 MWPNSPAILAKAAHKNNIPFILSTVTTMNIEKASELTEGNAWFQLYNPVEDAVRNDIIDR 149 Query: 113 ----YAPHTVLISNL-----GAVQLNYDFGVQKAHQAVHVLGADG----LFLHLNPLQEI 159 P VL+ ++ + A +++ G F L Q Sbjct: 150 AEAAGCPVLVLLCDVPTFGYRPRDFRNGLALPPKMSAKNIMQILGKPTWAFNTLKHGQPT 209 Query: 160 IQ------PNG----------NTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + P G + F+ KI + L+LK V S D + Sbjct: 210 FENLKPYTPEGLNLKQLGAFMDRTFSGKLNEDKIKPIRDRWKGKLVLKGVQ---SLQDTQ 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 ++ G ++ GG +S + +I + D + + Sbjct: 267 DAIRMGFDGIIVSNHGGRQLDAAQSTINSLKEIAANYGD-----------------QIEV 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 + GLR+G DI +++ GA + F+ + I L+ +F M L Sbjct: 310 MMDSGLRSGPDIARAMACGAKFTFMGRSFMYGCGALGNKGGEHTIGMLKTQFKQVMDQLV 369 Query: 321 TKRVQEL 327 +RV++L Sbjct: 370 CERVEDL 376 >gi|330468912|ref|YP_004406655.1| (S)-2-hydroxy-acid oxidase [Verrucosispora maris AB-18-032] gi|328811883|gb|AEB46055.1| (S)-2-hydroxy-acid oxidase [Verrucosispora maris AB-18-032] Length = 356 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + S D+PL++K + ++ D E ++ G ++ GG R ++ Sbjct: 212 WQDVEWIRSVTDLPLVVKGI---VAPSDAERAVQLGASGVLVSNHGG---------RQVD 259 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + T +L A+ GG+R G D+LK++ GA + P Sbjct: 260 GSVA---------TMTALPDVLDVVGGSAEVYLDGGVRRGTDVLKAVATGARVVFAGRPV 310 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A+D V A ++ +E + M G V + Sbjct: 311 LWGLAVDGESGVRAVLDLYLRELDLVMATCGCPDVASI 348 >gi|33601871|ref|NP_889431.1| putative L-lactate dehydrogenase [Bordetella bronchiseptica RB50] gi|33576308|emb|CAE33387.1| putative L-lactate dehydrogenase [Bordetella bronchiseptica RB50] Length = 402 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 111/363 (30%), Gaps = 76/363 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSF-----PLLISS---- 63 + D N++ F ++ + R L + E G++ + P+ IS+ Sbjct: 52 AEDNQAHDDNRRAFAEYGFLPRVL--VDVSARHTRTELFGQEWAAPFGVAPMGISALSAY 109 Query: 64 ------------------MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 M+G + +E + R + + ++ + A Sbjct: 110 RGDIVLARAARAAGIPAIMSGSSLIPLEEVARQAPGTWFQAYLP-GDPARIDALVERVAR 168 Query: 106 KSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQA----------VHVLGADGLFLHLN 154 + + +N V+ + ++ + + L H Sbjct: 169 AGYRTLVLTVDIPVSANRENNVRTGFSTPLKPGLRLAWDGLSRPRWLAGTFLRTLLAHGM 228 Query: 155 PLQE---------IIQPNGNTNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 P E I+ N +F+ S + + + L++K + + D Sbjct: 229 PRFENSFATRGAPILSANVLRDFSARDHLDWSHVQRIRRSWRGELVIKGI---MHPRDAA 285 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 L G ++ GG + + DI Sbjct: 286 LARAHGADGIIVSNHGGRQLDGACAPLRVLPDIAE------------------AAGAMAV 327 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 + G+R G D+LK++ LGA L PF A +A V AI LR+E +M +LG Sbjct: 328 MMDSGIRRGGDVLKALALGARFVFLGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLG 387 Query: 321 TKR 323 R Sbjct: 388 VTR 390 >gi|331002723|ref|ZP_08326238.1| hypothetical protein HMPREF0491_01100 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407136|gb|EGG86640.1| hypothetical protein HMPREF0491_01100 [Lachnospiraceae oral taxon 107 str. F0167] Length = 312 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 100/322 (31%), Gaps = 43/322 (13%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNKMIERINRN 78 N+ + ++ + RA+ + D+ + G + P+++ + + K ++ Sbjct: 27 HNRNYLNNILVEMRAIDSVLPDK---HKKIFGIEFDSPIMMPAFSHLNKVGKDGKKPMLE 83 Query: 79 LAIAAEKTKV----AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV 134 A AA+ + M + +D A ++ +A H ++ + + V Sbjct: 84 YAKAAKALNILNWVGMEPDDEFKEITDIGAKTVRIIKPFADHDIIFEQIEFAKKCGAIAV 143 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 V + P+ + Q S + +P + K V Sbjct: 144 GIDIDHVPGTDGKYDIVDGIPMGPVTQ-----------SDLTEYVKFAKIPFVAKGV--- 189 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS D K G ++ G I +GIP + L R Sbjct: 190 LSVQDAIKVKKVGCSAIVVSHHHGR----IP---------------FGIPPLMILPRIRE 230 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFI 313 E + + G D K++ LGA + L + + V+ I + +E Sbjct: 231 VLKEMEIFVDCSMDTGYDAYKALALGADAVSVGRGILPQLLKYGESGVIEKINKMNEELS 290 Query: 314 VSMFLLGTKRVQELYLNTALIR 335 M G K + I+ Sbjct: 291 ELMMYTGIKDTDSFDSSVLYIK 312 >gi|154299055|ref|XP_001549948.1| hypothetical protein BC1G_11840 [Botryotinia fuckeliana B05.10] gi|150857543|gb|EDN32735.1| hypothetical protein BC1G_11840 [Botryotinia fuckeliana B05.10] Length = 421 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 108/365 (29%), Gaps = 84/365 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM 71 + +D N+ F W ++ R L P D V G++ P+L++ + G Sbjct: 69 AGERATMDANRLAFRQWKMVPRMLRPTTKR---DLRVNLFGQEYDSPILMAPV-GVQQIF 124 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 E L+ + V + + S +S P+ L Q + + Sbjct: 125 HEDKETGLSEVCAEIGVPYILSTASSS-SIEEVAES-----NGPNGHRWYQLYWPQ-DDE 177 Query: 132 FGVQKAHQAVHVLGADGLFLHL-------------------------------------- 153 + +A G L + L Sbjct: 178 ITLSLLKRAKDS-GYKVLVVTLDTWALAWRPADLDGGYVPFMKGVGDKTGFTDPVFRRKF 236 Query: 154 ----NPLQEIIQPNGNTNFAD--------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 N E + + +I LL D P++LK + D Sbjct: 237 NEKYNATPEEKLFEASREWVGDVFSGAAHTWDQIKLLKDNWDGPIVLKGIQH---PDDAL 293 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + +G+ ++ GG ++ +I ++ Sbjct: 294 EAVNAGVDGIIVSNHGGRQLDGAVGSLEMLPEI-----------------VDAVGDKLTV 336 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R GVD++K++ LGA + P + A+ ++ + + SM L G Sbjct: 337 LFDSGIRTGVDVIKALSLGAKAVLVGRPAIYGLAIGGKQGAKQVLQGILADVDQSMGLAG 396 Query: 321 TKRVQ 325 + ++ Sbjct: 397 IQDIK 401 >gi|148554562|ref|YP_001262144.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] gi|148499752|gb|ABQ68006.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] Length = 395 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 23/162 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L + L++K + L D + L +G ++ GG + Sbjct: 238 WKDIAWLRNQWKGRLVIKGI---LDRRDATMALDAGADALVVSNHGGRQLDGVA------ 288 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL-ASP 289 PT ++L +AR A + GG+R+G D+LK+++LGA + + Sbjct: 289 ------------PTAVALPAIARAVGGRAPLLVDGGVRSGQDVLKALLLGADGVLIGRAW 336 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A A+ A + + E +M L G + + Sbjct: 337 AYAAAAGGEAAIAALLARFQVELRTAMTLAGFADIDTIRDRR 378 >gi|254456506|ref|ZP_05069935.1| L(+)-mandelate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] gi|207083508|gb|EDZ60934.1| L(+)-mandelate dehydrogenase [Candidatus Pelagibacter sp. HTCC7211] Length = 384 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + A L++K V +S D G ++ GG + + Sbjct: 233 WETLKRVRGAWKGKLIIKGV---MSPEDALKIKAEGADAIQVSNHGGRQLDSATAAIEAL 289 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + E + G+R G DI++++ LGA L P + Sbjct: 290 P-----------------LIRNALGKEFPLLFDSGIRGGSDIIRALALGADYVMLGRPLM 332 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D + ++ ++ E ++ L+G + E Sbjct: 333 YGIGADGEKGLRKILDIIKDELSTALGLVGLTDINE 368 >gi|163738699|ref|ZP_02146113.1| L-lactate dehydrogenase, putative [Phaeobacter gallaeciensis BS107] gi|161388027|gb|EDQ12382.1| L-lactate dehydrogenase, putative [Phaeobacter gallaeciensis BS107] Length = 401 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 105/365 (28%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + RN+ D L D S FLG P ++ M+G E Sbjct: 39 EATKARNRAALDQLGFAPSILHG--PQTPDLSRRFLGIDRPLPFGVAPVGMSGLIWPDAE 96 Query: 74 RINRNLAIAAEKTKVAMA---VGSQRVM--FSDHNAIKSFEL-RQYAPHT--VLISNLGA 125 R+ LA A + V SQ D A F+L P L++ A Sbjct: 97 RL---LARCAAAQGLPYCLSTVASQSPEDLVDDLGAAPWFQLYPPKDPDIRRDLLARAKA 153 Query: 126 VQ-----LNYDFGVQ---------------------KAHQAVHVLGADGLFL----HLNP 155 L D V A A+ A G+ H+ Sbjct: 154 AGFAGLVLTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVAMRPAWAVGMARRGLPHMKT 213 Query: 156 LQEIIQPNG------------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + G D + L D PL++K V + + D Sbjct: 214 LDTYVSGAGASLSSTAHVGYLLRTSPDWDY-VQWLRDHWDGPLIIKGV---MRAEDAAPL 269 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 G ++ G + T +L R I Sbjct: 270 EAIGADALWVSNHAGRQFDAAP------------------STIEALPGIRAA-TRLPLIF 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+ +G+DIL+++ LGA L F A S ++ LRK+ +M LG + Sbjct: 311 DSGIESGLDILRALALGADYVMLGRAFHFALAALGSRGPDHLVDILRKDLDANMGQLGLE 370 Query: 323 RVQEL 327 + L Sbjct: 371 TLSAL 375 >gi|72006424|ref|XP_783543.1| PREDICTED: similar to ENSANGP00000018221 [Strongylocentrotus purpuratus] gi|115949149|ref|XP_001184378.1| PREDICTED: similar to ENSANGP00000018221 [Strongylocentrotus purpuratus] Length = 355 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 92/321 (28%), Gaps = 76/321 (23%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN 78 + + F + + + L + + LG+ L +P+ I+ T + + Sbjct: 35 LQDSTNAFSRYRIRSQVLQ--DVSKRSLATTVLGQPLKYPICIAP-TAVHRFAHPDATKE 91 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 + AE + M S + ++ AP+ + + + + Sbjct: 92 TSKGAEAAETLMV-------LSADSCFPMADVAAAAPNGHRLMQM-YPFTDRQLTLTVIR 143 Query: 139 QAVHVLGADGLFLHLN-PLQEI-------------------------------------- 159 +A LG L + ++ P Q + Sbjct: 144 RA-ESLGFKALVVTVDSPSQGLDRRMVEIFNEPHVLNNPDFRLAVFEADISSSRAATAEG 202 Query: 160 ------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 N I + S +P++ K + L+ + +G+ + Sbjct: 203 DLKLVNYMTEMQYNPTATWDYIRWMKSQTSLPIVCKGI---LTCESAKAAAHAGVDGILV 259 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 + GG + D +++ + + + GG+R G D+ Sbjct: 260 SAHGGRQLDGAPAPIDALTEVVDAVRG----------------RDIEVYMDGGVRTGTDV 303 Query: 274 LKSIILGASLGGLASPFLKPA 294 K++ LGA + P L Sbjct: 304 FKALGLGARAVFVGRPILWGL 324 >gi|46115194|ref|XP_383615.1| hypothetical protein FG03439.1 [Gibberella zeae PH-1] Length = 452 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 18/142 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + +L D P++LK + + D L ++ G+ ++ GG + D Sbjct: 293 WAHLKILKELWDGPIVLKGIQ---TVEDAHLAIEHGMDGIIVSNHGGRQLDGAVASLDAL 349 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++I + + I G+R G DILK++ LGA + P+ Sbjct: 350 AEIA--------------ADEKVKSSNLTIIFDSGVRTGSDILKALALGAKAVSIGRPYA 395 Query: 292 K-PAMDSSDAVVAAIESLRKEF 312 A V ++ L + Sbjct: 396 YGLAAGGQQGVEHVLKCLLADM 417 >gi|254512898|ref|ZP_05124964.1| (S)-mandelate dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221532897|gb|EEE35892.1| (S)-mandelate dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 365 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 96/357 (26%), Gaps = 64/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G RN+ D L R L + + G+ P I+ M G N Sbjct: 32 AGSEAGAARNRAALDATTLRPRILQ--DVSQRSLATTLFGQTAQRPFGIAPM-GMCNLSA 88 Query: 73 ERINRNLAIAAEKTKVAMAVGS-----QRVMFSDHNAIKSFELR---QYAPHTVLISNLG 124 + LA A + + + V + + + F+L + L+ Sbjct: 89 PGADLMLARLAARHSIPLGVSTVASTPMEEIIVEAEGNAWFQLYFSGDGSGTVKLVERAK 148 Query: 125 AV---QLNYDFGVQKAHQAVHVL-------------GADGLFLH---------------L 153 A L V + + L LH Sbjct: 149 AAGYDTLVLTVDVPEVGRRPRELRHGFRMPFRIGPRQFIDFALHPRWSLTSLAHGRPQMA 208 Query: 154 NPLQEIIQ-PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 N L E + + +A L L++K V L D +G+ Sbjct: 209 NFLMEGYEFDRTESRAKATWETLARLRDQWGGRLVVKGV---LDVEDAIALKAAGVDAIQ 265 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ G S + +I + + GLR G D Sbjct: 266 VSSHGARQLDSAPSPFQMLPEI-----------------RKAVGADFPLFYDSGLRTGED 308 Query: 273 ILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + K++I GA L A + + L E ++M +G +L Sbjct: 309 VTKALIAGADFTFFGRILLFAIAAAGEAGLQQLWDVLSDEMSITMAQIGACSPGDLR 365 >gi|209886279|ref|YP_002290136.1| L-lactate dehydrogenase [Oligotropha carboxidovorans OM5] gi|209874475|gb|ACI94271.1| L-lactate dehydrogenase [Oligotropha carboxidovorans OM5] Length = 383 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 23/176 (13%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 L L E I + + + I + + +++K + L +D +++G Sbjct: 218 LTSLSEWISTQFDPSLSW--KDIEWIRNIWPGKMVIKGI---LDIVDAREAVRTGAEALV 272 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 ++ GG S + +I + ++ + + GG+R G D Sbjct: 273 VSNHGGRQLDGAPSSISVLPEI-----------------VQELGSQIEIMFDGGIRTGQD 315 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 IL+++ GA + ++ A V AI+ L KE +M L G RV+++ Sbjct: 316 ILRALAFGAKSCMIGRAYVHGLGAGGQAGVAKAIDILAKELSTTMGLCGINRVEDI 371 >gi|115649834|ref|XP_794861.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115931815|ref|XP_001180254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 330 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 100/314 (31%), Gaps = 64/314 (20%) Query: 19 IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---GGNNKMIER- 74 + + + F + + +R L IS S LG+++ +P+ I+ + Sbjct: 40 LKESTEAFSRYRIRNRVLQGISHR--SLSTTVLGEQIQYPIGIAPTAVHAAAHPDAEAET 97 Query: 75 --------------INRNLAIA----AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH 116 ++ + AIA A + Q +F D + + + A Sbjct: 98 ARGAAAADTLMVLSVDSHTAIADVSAAAPGGLRWM---QTYLFKDRLLTQ--HVVREAER 152 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-----PLQEIIQPNGNT----- 166 + + V K A++ A F N P + G+T Sbjct: 153 AGFKALVITVDSPVSGLDSKVRAALNKDAAIFAFRMSNFEADIPSSRAAKAEGDTRYVKY 212 Query: 167 ------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 N + I + S ++P++ K + +S+ +G+ ++ GG Sbjct: 213 VHQMQYNDSATWEDIRWIKSITNLPIVCKGI---VSADSAREAADAGVDGILVSAHGGRQ 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + D +++ + GI + GG+R G D+ K++ G Sbjct: 270 SDVAPAPIDALAEVVDAVRGRGI----------------EVYMDGGIRTGTDVFKALGRG 313 Query: 281 ASLGGLASPFLKPA 294 A + P L Sbjct: 314 ARAVFVGRPILWGL 327 >gi|72078025|ref|XP_788648.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115975853|ref|XP_001183482.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 392 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 93/310 (30%), Gaps = 74/310 (23%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 + R L + ++ S + LG+ +S P+ +S TG + + A A + Sbjct: 47 RYRFRPRLL--VDVSDIQLSTKVLGQSISMPICVSP-TGAHRLANADGEKATARGAMEAG 103 Query: 88 VAM--AVGS------------------QRVMFSDHNA-------------------IKS- 107 M + S Q +F D I S Sbjct: 104 TLMIQSCFSNDKYSDVARAAPEGLRWCQIYIFKDRQVTRHLIREAERAGYKAVVLTIDSP 163 Query: 108 ---FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 F+ + P + + N + ++ A G LF+H Sbjct: 164 LTGFKADEVGPDYMCYRHDEYRYFNMEMDSSESQAAAKRAGDPTLFVHF---------GT 214 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + + + L S +P++ K + L+ +G I+ GG + Sbjct: 215 DMDSSVTWDDVKWLRSVTSLPIVCKGI---LTGQAARQAADAGASGIFISAHGGRQLDGV 271 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D +++ + + GG+R G D+LK++ GA Sbjct: 272 PAPIDALAEVVEAVRG----------------RNVEVYMDGGVRAGTDVLKALARGAKAV 315 Query: 285 GLASPFLKPA 294 + P L Sbjct: 316 FVGRPALWGL 325 >gi|291299874|ref|YP_003511152.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stackebrandtia nassauensis DSM 44728] gi|290569094|gb|ADD42059.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stackebrandtia nassauensis DSM 44728] Length = 421 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 23/163 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +P+LLK V L D + SG+ ++ GG Sbjct: 277 WDDLEKLRQHTTLPILLKGV---LHPDDAVRAVDSGVDGIVVSNHGGRQIDGA------- 326 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I + +L + + + G+R G D K++ LGA L P+ Sbjct: 327 -----------IASLEALPRVVTAVEDAIPVLFDSGIRGGADAYKALALGAHAVCLGRPY 375 Query: 291 LKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + + V + E +++ L G + ++ +T Sbjct: 376 VYGLTLAGTIGVRQVLSHFIAELDLTLGLSGCTSIPDITRDTL 418 >gi|330975531|gb|EGH75597.1| L-lactate dehydrogenase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 156 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 23/145 (15%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+++K + L D L G ++ GG + Sbjct: 1 PMIIKGI---LDPQDARDALSFGADGIVVSNHGGRQLDGA------------------LS 39 Query: 245 TPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVV 302 T +L + + ++ +A G+R+G+D+++ + LGA L D V Sbjct: 40 TAKALPPIVQAVGSDLTVLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVE 99 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ +E V+M L G ++++ Sbjct: 100 NMLDIFAREMHVAMTLTGVTSIEQI 124 >gi|241673475|ref|XP_002399980.1| glycolate oxidase, putative [Ixodes scapularis] gi|215504171|gb|EEC13665.1| glycolate oxidase, putative [Ixodes scapularis] Length = 321 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 110/315 (34%), Gaps = 36/315 (11%) Query: 40 SFDEVDPSVEFLG-KKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRV 97 + E V LG +KLS P+ IS KM +A AA+ M + S Sbjct: 13 NVAERRIEVTLLGDQKLSMPVGISPTA--FQKMAHPEGEIAVAKAAQAAGTVMTLSSFSN 70 Query: 98 M-FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP- 155 D +++ AP + L V + +F +A G L + ++ Sbjct: 71 DCLED--------VQRGAPEGLRWFQL-YVFRDREFTRNLVERA-ERSGYRALVVTVDMP 120 Query: 156 ---------LQEIIQPNGNT--NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + P NF S SA + L+ D+ Sbjct: 121 VEGQKNFDKMSDFRIPEHLRYGNFLGTSRHEDAFPSAAVCDDI---CDASLTWADVIWLR 177 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESD-IGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 GI + +G + S + + D + T + ++ R + Sbjct: 178 --GITKLPVVAKGICTGSLLLHTTVILDDPHARLLLGMSHRTAVLPDIVRAVRGRVEVYL 235 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D++K++ LGA + P L A + V +E LR+E ++ L+G Sbjct: 236 DGGVRRGTDVVKALALGAKAVFIGRPALWGLAYNGKAGVRQTLEILREELDRALALMGCS 295 Query: 323 RVQELYLNTALIRHQ 337 V +L ++ HQ Sbjct: 296 SVDQLR--PEMVVHQ 308 >gi|148557126|ref|YP_001264708.1| L-lactate dehydrogenase (cytochrome) [Sphingomonas wittichii RW1] gi|148502316|gb|ABQ70570.1| L-lactate dehydrogenase (cytochrome) [Sphingomonas wittichii RW1] Length = 389 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L L++K + L +E + +G I+ GG S D+ Sbjct: 244 WDDLKWLRDQWPGTLIVKGL---LDPGQVEPAIAAGYDGIVISNHGGRQLDGAVSTLDVL 300 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 D + G+R G DILK++ LGAS + L Sbjct: 301 PDFAA-----------------AAKRRIPLLIDSGVRTGTDILKAVALGASAVQVGRATL 343 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +A V A+ R E ++M L+G RV + A++R Sbjct: 344 YGLSTAGEAGVGHALGIFRTELDMAMALVGLNRVAD--ATPAIVR 386 >gi|254462152|ref|ZP_05075568.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2083] gi|206678741|gb|EDZ43228.1| L-lactate dehydrogenase [Rhodobacteraceae bacterium HTCC2083] Length = 369 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 99/364 (27%), Gaps = 80/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G RN+ D L R L E S GK P I+ M G N Sbjct: 34 AGEETGALRNRAALDGATLRPRIL--RDVSERSLSTTLFGKPCRRPFGIAPM-GMCNLSG 90 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----------------NAIKSFELRQYAP 115 + LA A K +V V + + + +F+L + A Sbjct: 91 IGADLMLARLAAKYEVPHGVSTVASTPMEKIIEVAEGHAWFQLYFSGEGVGTFKLVERAK 150 Query: 116 HTVLISNLGAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQ----------------- 157 G L V + + + + + P Q Sbjct: 151 AA------GYETLVLTADVPEVGRRPRELRHGFKMPFRIGPKQFIDFALHPHWSLSALFA 204 Query: 158 --------EIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 E+ + + L A D L++K V L D + Sbjct: 205 GKPQMANFEMDGYEFDRTESRARADWETLKRLRDAWDGNLVVKGV---LDVEDAVSLRNA 261 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE--MARPYCNEAQFIAS 264 G+ ++ G P+P SL M ++ Sbjct: 262 GVDAVQVSSHGARQLESA-------------------PSPFSLLPAMRAALGSDYPIFFD 302 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 GLR+G D LK++ GA +A + + E ++M G Sbjct: 303 SGLRSGEDALKALHAGADYVFFGRVLQFAIAAGGEAGLAKLWDVFSDELSIAMAQTGLTS 362 Query: 324 VQEL 327 + E+ Sbjct: 363 LTEM 366 >gi|268317022|ref|YP_003290741.1| Lactate 2-monooxygenase [Rhodothermus marinus DSM 4252] gi|262334556|gb|ACY48353.1| Lactate 2-monooxygenase [Rhodothermus marinus DSM 4252] Length = 396 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P+LLK + L D ++G+ ++ GG + + Sbjct: 251 WDDLAFLKENTRLPILLKGI---LHPDDARRAAEAGVAGVIVSNHGGRQVDGAIAALEAL 307 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + + G+R D+LK++ LGA L P+ Sbjct: 308 PAV-----------------VEAVGDRLTVLFDSGIRRAADVLKAMALGARAVLLGRPYA 350 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+ D V +E+L E +++ LLG + E+ + Sbjct: 351 CGLAVGGEDGVRFVLENLLAELDLALGLLGCRSWDEVDRS 390 >gi|126443200|ref|YP_001063981.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 668] gi|126457306|ref|YP_001076901.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1106a] gi|134278444|ref|ZP_01765158.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 305] gi|167851090|ref|ZP_02476598.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei B7210] gi|167916375|ref|ZP_02503466.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 112] gi|167924234|ref|ZP_02511325.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei BCC215] gi|217422476|ref|ZP_03453979.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 576] gi|242313839|ref|ZP_04812856.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1106b] gi|254193684|ref|ZP_04900116.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei S13] gi|126222691|gb|ABN86196.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 668] gi|126231074|gb|ABN94487.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1106a] gi|134250228|gb|EBA50308.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 305] gi|169650435|gb|EDS83128.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei S13] gi|217394707|gb|EEC34726.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 576] gi|242137078|gb|EES23481.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1106b] Length = 380 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 98/363 (26%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNL-- 123 I A AA V + + + + +R A LI Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGV---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 +G ++ GG + + +L + + Sbjct: 266 DAGADAIVVSNHGGRQLDGA------------------MSSVEALPAIVEAAGKRVEVWL 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 308 DGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCT 367 Query: 323 RVQ 325 ++ Sbjct: 368 DIR 370 >gi|291006808|ref|ZP_06564781.1| L-lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] Length = 391 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P LLK + D + G ++ GG + + + Sbjct: 239 WEDLAWLREQWDGPFLLKGITH---PDDARRAVDIGASAISVSNHGGNNLDSTPATIRVL 295 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ +GA + +L Sbjct: 296 PSV-----------------VDAVGDQIEVLFDGGVRRGSDVVKALAMGARAVMIGRAYL 338 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V IE LR ++ L V ++ +I Sbjct: 339 WGMAAGGERGVHNVIEVLRGGIDSALLGLAKSSVHDVDRADLVI 382 >gi|217969102|ref|YP_002354336.1| (S)-mandelate dehydrogenase [Thauera sp. MZ1T] gi|217506429|gb|ACK53440.1| (S)-mandelate dehydrogenase [Thauera sp. MZ1T] Length = 391 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 115/369 (31%), Gaps = 83/369 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN++ D+ L+ R L + + + +V G +++ P +I+ TG N + Sbjct: 42 ADDELALARNRRVLDEILLLPRTL--VDVSQRELAVPLFGTEIALPAVIAP-TGFNGLLT 98 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-VMFSDHNAIKSFELRQYAP---------------- 115 +R LA AA + V D A Q P Sbjct: 99 HAGDRVLAEAAHAAGIPFCQSMVSTVALEDIAATGVRHWMQIYPFKDRDNLAAVVKRAEH 158 Query: 116 ----------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + N + NY ++ A + + +G LH + +++ P+G Sbjct: 159 AGCEAIVLTTDASVFGNREWDRRNYRAPMKLAWRKLLDVG-----LHPRWVLDVLVPHGM 213 Query: 166 TNFADL---------------------------SSKIALLSSAMDVPLLLKEVGCGLSSM 198 F +L + L LL+K V L Sbjct: 214 PRFRNLGDFLPPGMDSAKNAAAFLAAQMDTSLTWEDLRRLRDLWPRRLLVKGV---LLPE 270 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D ++G ++ GG + I T ++ A E Sbjct: 271 DALRAQEAGADGVVVSNHGGRQLDCAPAP---------------IETLAAVRQA--VGAE 313 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 I G R G D +K+ LGA A + A+E LR E ++ Sbjct: 314 MTVIVDSGFRRGSDFVKARALGADAAMSGRATLYGLAAAGAAGAARALEILRGEMERTLG 373 Query: 318 LLGTKRVQE 326 L+G R+ E Sbjct: 374 LIGCARMDE 382 >gi|258651023|ref|YP_003200179.1| (S)-2-hydroxy-acid oxidase [Nakamurella multipartita DSM 44233] gi|258554248|gb|ACV77190.1| (S)-2-hydroxy-acid oxidase [Nakamurella multipartita DSM 44233] Length = 393 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 107/343 (31%), Gaps = 77/343 (22%) Query: 45 DPSVEFLGKKLSFPLLIS------------------------SMTGGNNKMIERINRNLA 80 D + +G+++S P++IS +M G ++ + I +A Sbjct: 62 DLATTVMGQEISLPVIISPTGVQAVDPDGEVAVARAAAARGTAM-GLSSYASKPIEEVIA 120 Query: 81 ----------------IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISN 122 ++ + A A G++ ++ SF + + +P N Sbjct: 121 ANPQTFFQVYWSGSRDQIRQRVERARAAGAKGLIL---TLDWSFSMGRDWGSPKIPEKVN 177 Query: 123 LGAVQLNYDFGVQKAHQA----VHVLGADGLFLHL-NPLQEI-----IQPNGNTNFADLS 172 L A+ + + D +L +P Q + Sbjct: 178 LKAMWDYAPEAITHPRWLWSFGKTLTIPDLTVPNLTDPGQSAPTFFGVYYEWMQTPPPTW 237 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A L PL+LK + D + +G+ ++ GG + + Sbjct: 238 DDVAWLVELWGGPLMLKGICR---VDDARNAVAAGVSAISVSNHGGNNLDSTPASIRALP 294 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I + + + GG+R G D++K++ LGA + +L Sbjct: 295 AI-----------------VDAVGDRVEIVLDGGIRRGSDVVKAVALGARAVMIGRAYLW 337 Query: 293 PA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V ++ LR ++ LG + +L +I Sbjct: 338 GLGANGQAGVENVLDILRGGIDSAVLGLGHSTIHDLSPADLVI 380 >gi|134098954|ref|YP_001104615.1| L-lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] gi|133911577|emb|CAM01690.1| L-Lactate dehydrogenase (cytochrome) [Saccharopolyspora erythraea NRRL 2338] Length = 361 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P LLK + D + G ++ GG + + + Sbjct: 209 WEDLAWLREQWDGPFLLKGITH---PDDARRAVDIGASAISVSNHGGNNLDSTPATIRVL 265 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + GG+R G D++K++ +GA + +L Sbjct: 266 PSV-----------------VDAVGDQIEVLFDGGVRRGSDVVKALAMGARAVMIGRAYL 308 Query: 292 KPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V IE LR ++ L V ++ +I Sbjct: 309 WGMAAGGERGVHNVIEVLRGGIDSALLGLAKSSVHDVDRADLVI 352 >gi|21325691|dbj|BAC00312.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Corynebacterium glutamicum ATCC 13032] Length = 405 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 107/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + I R ++ F++ L P + VD + + LG S P I+ Sbjct: 44 AEAELSITRAREAFENIEFHPDILKP---AEHVDTTTQILGGTSSMPFGIAPTGFTRLMQ 100 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 101 TEGEIAGAGAAGAAGIPFTLSTLGTTSIEDVKATNPNGRNWFQLYVMRDREISYGLVERA 160 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 K + V + + ++ F + + +++ + DF Sbjct: 161 AKAGFDTLMFTVDTPIAGYRIRDSRNGFSIPPQLTPSTVLNAIPRPWWWIDF------LT 214 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + +++ + + + ++ L++K V + D Sbjct: 215 TPTLEFASLSSTGGTVGDLLNSAMDPTIS--YEDLKVIREMWPGKLVVKGVQ---NVEDS 269 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L G+ ++ GG R L + + +E Sbjct: 270 VKLLDQGVDGLILSNHGGRQLDRAPVPFHLLPQV-----------------RKEVGSEPT 312 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG DI+ ++ +GA + +L M + V I LR E +M LL Sbjct: 313 IMIDTGIMNGADIVAAVAMGADFTLIGRAYLYGLMAGGREGVDRTIAILRSEITRTMALL 372 Query: 320 GTKRVQEL 327 G ++EL Sbjct: 373 GVSSLEEL 380 >gi|67922206|ref|ZP_00515720.1| L-lactate dehydrogenase (cytochrome) [Crocosphaera watsonii WH 8501] gi|67855909|gb|EAM51154.1| L-lactate dehydrogenase (cytochrome) [Crocosphaera watsonii WH 8501] Length = 385 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 21/159 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 L S + LK + +S D + + G ++ GG S D Sbjct: 238 WKDAEKLCSQWNGQFALKGI---MSVEDAKRAVDIGCTGIMVSNHGGRQLDGCRSPFDQL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++I ++ I GG++ G +LK++ +GA +L Sbjct: 295 AEI-----------------CDAVGDKIDVICEGGIQRGTHVLKALSVGAKACSGGRLYL 337 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 A V A+ ++R E M L+G ++ +L Sbjct: 338 FALAAAGQAGVERALGNMRTEIERDMKLMGVTKLDQLSR 376 Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + RN + + D LI L + + VD SVE +G+KL P+ + Sbjct: 32 ADDEQTYRRNTEAYGDCDLIPNVL--VGVENVDMSVEVMGQKLDMPIYCAPTA 82 >gi|19554105|ref|NP_602107.1| L-lactate dehydrogenase [Corynebacterium glutamicum ATCC 13032] gi|62391754|ref|YP_227156.1| L-lactate dehydrogenase [Corynebacterium glutamicum ATCC 13032] gi|41327096|emb|CAF20940.1| PUTATIVE L-LACTATE DEHYDROGENASE [Corynebacterium glutamicum ATCC 13032] Length = 420 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 107/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + I R ++ F++ L P + VD + + LG S P I+ Sbjct: 59 AEAELSITRAREAFENIEFHPDILKP---AEHVDTTTQILGGTSSMPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEIAGAGAAGAAGIPFTLSTLGTTSIEDVKATNPNGRNWFQLYVMRDREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 K + V + + ++ F + + +++ + DF Sbjct: 176 AKAGFDTLMFTVDTPIAGYRIRDSRNGFSIPPQLTPSTVLNAIPRPWWWIDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + +++ + + + ++ L++K V + D Sbjct: 230 TPTLEFASLSSTGGTVGDLLNSAMDPTIS--YEDLKVIREMWPGKLVVKGVQ---NVEDS 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L G+ ++ GG R L + + +E Sbjct: 285 VKLLDQGVDGLILSNHGGRQLDRAPVPFHLLPQV-----------------RKEVGSEPT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG DI+ ++ +GA + +L M + V I LR E +M LL Sbjct: 328 IMIDTGIMNGADIVAAVAMGADFTLIGRAYLYGLMAGGREGVDRTIAILRSEITRTMALL 387 Query: 320 GTKRVQEL 327 G ++EL Sbjct: 388 GVSSLEEL 395 >gi|33592416|ref|NP_880060.1| putative L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|33572061|emb|CAE41589.1| putative L-lactate dehydrogenase [Bordetella pertussis Tohama I] gi|332381832|gb|AEE66679.1| putative L-lactate dehydrogenase [Bordetella pertussis CS] Length = 393 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 23/159 (14%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + D S + + + L++K + + D L G ++ GG Sbjct: 245 RDHLDW-SHVQRIRRSWRGELVIKGI---MHPRDAALARAHGADGIIVSNHGGRQLDGAC 300 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + + DI + G+R G D+LK++ LGA Sbjct: 301 APLRVLPDIAE------------------AAGAMAVMMDSGIRRGGDVLKALALGARFVF 342 Query: 286 LASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKR 323 L PF A +A V AI LR+E +M +LG R Sbjct: 343 LGRPFNYAAAVGGEAGVAHAIGLLREEIDRNMAMLGVTR 381 >gi|302383983|ref|YP_003819806.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] gi|302194611|gb|ADL02183.1| L-lactate dehydrogenase (cytochrome) [Brevundimonas subvibrioides ATCC 15264] Length = 407 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +++K + L D G ++ GG + D Sbjct: 237 WDDAEEIRRLWSGRMVIKGI---LDPADAMEAAARGFDGVVVSNHGGRQLDGTLASIDAL 293 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I AR + + GG+R+G+D+L+++ GA L ++ Sbjct: 294 GPI-----------------ARAVGDRMTVLMDGGIRSGLDVLRAMASGADGVLLGRAWV 336 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + + E V+M L+G R+ E+ Sbjct: 337 YGLAARGQRGVEEVLSLIAAEMRVAMTLVGVSRLDEI 373 >gi|157963044|ref|YP_001503078.1| ferredoxin-dependent glutamate synthase [Shewanella pealeana ATCC 700345] gi|157848044|gb|ABV88543.1| ferredoxin-dependent glutamate synthase [Shewanella pealeana ATCC 700345] Length = 514 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 108/281 (38%), Gaps = 44/281 (15%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V+ + E +G KL PL +S M+ G+ +I LA AE + G Sbjct: 160 MEDVEVTTELIIGPQARKPLKLDIPLFVSDMSFGSLSEEAKI--ALARGAELAGTGICSG 217 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA--------HQA 140 + + SD A S + A L+ + + G + Sbjct: 218 -EGGILSDEQAENSRYFYELASAKFGYKEALLCKVQSFHFKGGQGAKTGTGGHLPASKNV 276 Query: 141 VHVLGADGLFLHLNPLQ--EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 + GL ++ + + + +F + ++ +S +P+ K + Sbjct: 277 GKISEVRGLPEGVDAISPPTFTELKSSADFKRFADRVREVSG--GIPIGFKLSANHIER- 333 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 334 DIQFALDASADYIILDGRGGGTGAAPEIFRDHIS----------VPTIPALARARRYLDQ 383 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 IA+GG+R +D +K++ LGA +++ ++ Sbjct: 384 KGESGRVTLIATGGIRTPIDFVKAMALGADGVAVSNSAMQA 424 >gi|307326364|ref|ZP_07605560.1| (S)-2-hydroxy-acid oxidase [Streptomyces violaceusniger Tu 4113] gi|306888027|gb|EFN19017.1| (S)-2-hydroxy-acid oxidase [Streptomyces violaceusniger Tu 4113] Length = 429 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A L + LL+K V LS D ++ G ++ GG R + + Sbjct: 286 EHLAWLRAHWPYRLLVKGV---LSPRDARRVVEGGADGVIVSNHGGRQLDRTPATLTVLP 342 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I +A I G+ +G DIL + LGA + +L Sbjct: 343 GIREEL-----------------GPDATVILDSGVTHGQDILAARALGADAVMIGRAYLY 385 Query: 293 PAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 M + V A+ LR+E+ S+ LLG L + A+ RH Sbjct: 386 GLMAGGERGVERAVTILREEYARSLQLLG------LKASDAIARH 424 >gi|326315316|ref|YP_004232988.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372152|gb|ADX44421.1| L-lactate dehydrogenase (cytochrome) [Acidovorax avenae subsp. avenae ATCC 19860] Length = 399 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I + L++K + LS D G ++ GG S + Sbjct: 253 WAHIEAIRQRWKGRLVIKGL---LSVEDALQARGIGADGIVLSNHGGRQLDGAASPMRVL 309 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF- 290 + + G R G D+LK++ LGA + + PF Sbjct: 310 EAV-----------------VAAVGPGYPVLIDSGFRRGSDVLKALALGARMVLVGRPFN 352 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + AI LR E ++ +LG EL Sbjct: 353 YAAAVAGEAGIAHAIGLLRDEVDRNLAMLGVTSCAEL 389 >gi|72125013|ref|XP_793811.1| PREDICTED: similar to MGC108441 protein, partial [Strongylocentrotus purpuratus] Length = 350 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 100/335 (29%), Gaps = 67/335 (20%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GGNNKMIERINR 77 F + + R L + + LG+ + +P+ IS G + Sbjct: 41 AFSRYRIRSRVLQ--DVSKRCLATAVLGQSIPYPICISPTACQFFAHPDGEEATAKAAEA 98 Query: 78 NLAIAAEKTK-------VAMAVGS----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 A+ +AMA + + + +R+ A+ Sbjct: 99 VGALMVLSCGARSSMEDIAMAAPGGLRWMNIYPFTDRQLTEYTIRKAEKLGF-----KAL 153 Query: 127 QLNYDFGVQKAHQAVH-VLGADGLFLHLN---PLQEIIQP------------------NG 164 + D V H A+ +LG D + H + P+ E P Sbjct: 154 VVTVDSPVPGIHGAMEELLGKDHVVNHSSYRMPVYEADIPSARAAKQESNANHFQYVDEM 213 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 N I + +P++ K + L++ +G+ ++ GG Sbjct: 214 TYNPKATWEYIRWIKKVTSLPIVCKGI---LTAESASDAASAGVDGILVSAHGGRQQESS 270 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D +++ G + GG+R G DI K++ GA Sbjct: 271 PAPIDALAEVVEAVHGRG----------------VEVYMDGGVRTGTDIFKALGRGARAV 314 Query: 285 GLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFL 318 L P L A + V ++ LR + + L Sbjct: 315 FLGRPILWGLACQGPEGVTRILQILRDQLDAILAL 349 >gi|124026752|ref|YP_001015867.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Prochlorococcus marinus str. NATL1A] gi|123961820|gb|ABM76603.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Prochlorococcus marinus str. NATL1A] Length = 398 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 122/374 (32%), Gaps = 84/374 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + +N +++ R +S + + L ++ P L+ + G+++M Sbjct: 37 ADREQTLSQNCNAYNEILFRPRC--AVSVPSCELGISVLDQQFQLPFLLGPV--GSSRMF 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---------SFEL-----RQYAPHTV 118 + +AA + A G + S ++L ++ A T+ Sbjct: 93 YP--QGEVVAAREAGKA-GTGYTLSILSGCLLEDVKAATNGPAWYQLYLLGGKEVALKTI 149 Query: 119 LISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL-------QEIIQP------ 162 + A+ + D V + + L +NPL Q +++P Sbjct: 150 ARAKEAGFSAIVVTIDTPVSGLRER-DMRSGTQQLLSMNPLEMLPYIPQILVKPCWMTQW 208 Query: 163 ---NGNTNFADL----------------------SSKIALLSSAMDVPLLLKEVGCGLSS 197 G +F ++ + + A +++K + G Sbjct: 209 LSDGGLMSFPNVQLDDGPMGYTAIGPALEQSVVTWDDLQWIREAWGGKIIVKGIHIG--- 265 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + ++ G I+ G + + +I Sbjct: 266 DDAKKAVELGADAIVISNHGARQLDSVAPTIRVLPEI-----------------LAAVDG 308 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + + GG+R G D++K++ LGA + + A V AIE L+ + + +M Sbjct: 309 KIDVLLDGGIRRGSDVVKALCLGAKGVLIGRAYAYGLAAAGGKGVARAIEILQTDIVRTM 368 Query: 317 FLLGTKRVQELYLN 330 LLG V +L + Sbjct: 369 KLLGCGSVADLNKS 382 >gi|84683559|ref|ZP_01011462.1| L-lactate dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84668302|gb|EAQ14769.1| L-lactate dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 383 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + +A D P+++K + L D+E + G++ ++ GG Sbjct: 237 WEDVARVRAAWDGPMIVKGL---LHPDDVEAARRIGVQGISVSNHGGRQLDGS------- 286 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + +L +M ++ + + G+R G DILK+ LGAS + + Sbjct: 287 -----------LSAVAALPDMVATAGDDMEVLLDSGVRRGTDILKARALGASGVLIGRAW 335 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V AIE LR E +M LLG + + L Sbjct: 336 AYGLAAAGEAGVDKAIELLRDEMTNAMMLLGEREIAAL 373 >gi|317125178|ref|YP_004099290.1| (S)-2-hydroxy-acid oxidase [Intrasporangium calvum DSM 43043] gi|315589266|gb|ADU48563.1| (S)-2-hydroxy-acid oxidase [Intrasporangium calvum DSM 43043] Length = 415 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 69/367 (18%), Positives = 124/367 (33%), Gaps = 68/367 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + R ++ F R L EVD S +G S PL+++ TG M Sbjct: 60 AEQEISLRRAREAFSRIEFRPRVL--RDVSEVDASRVVVGSPSSLPLVLAP-TGFTRMMH 116 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR------VMFSDHNAIKSFEL--------------RQ 112 R +A AA + ++ A+ + V + + F+L R Sbjct: 117 HEGERAVARAAARAQIPYALSTMGTVSVEEVAAAAPGSELWFQLYLWKDRAASLELVQRA 176 Query: 113 YAP--HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF---LH----LN-----PLQE 158 A T++++ AV V+ L L LH +N PL+ Sbjct: 177 AAAGYRTLVLTVDTAVAGRRLRDVRNGLTIPPALTVRTLADMSLHPAWWINLLTTEPLEF 236 Query: 159 IIQPNGNTNFADLSSKI----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + ADL ++ A + +++K + D + GI Sbjct: 237 ASLRDSGGTVADLVDRMFDPSASISDLAWIRDQWPGRIVVKGIQH---PDDAVAMVDLGI 293 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R + ++ DI + + G+ Sbjct: 294 DGIIVSNHGGRQLDRAATPLEVLPDI-----------------VAAVAGRIEVLLDTGIT 336 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ ++ GA+ + +L M +A V + LR + +M LLG + EL Sbjct: 337 DGADIVAAVANGATGCLVGRAYLYGLMAGGEAGVDRTLSILRDQVTRTMRLLGVSSLDEL 396 Query: 328 YLNTALI 334 A+I Sbjct: 397 TPEHAVI 403 >gi|238608583|ref|XP_002397271.1| hypothetical protein MPER_02335 [Moniliophthora perniciosa FA553] gi|215471384|gb|EEB98201.1| hypothetical protein MPER_02335 [Moniliophthora perniciosa FA553] Length = 232 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 56/256 (21%) Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + + V + D +R+ P + + N Q QA Sbjct: 8 AQENILYMVSDYSSLSKD-------TIREAIPSNQTLFQQIYISNNR-TTTQAQLQAAEA 59 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKI---------ALLSSAMDVPLLLKEVGCG 194 G + L ++ E + ++ + + +P++ K + Sbjct: 60 SGFKAITLTVDAPAEASRHRAARFSVGSANTQYTYFSWEYYNEMRNWTSLPIIPKGI--- 116 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIE-SHRDLESDIGIVFQDWGIPTPLSLEMAR 253 L+ D ++ G ++ GG + S R Sbjct: 117 LTWEDAVKAVEVGAPAIFLSNHGGRQLDGVPFSPR------------------------- 151 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFI 313 +A GG+R G D LK + LG G+ PF+ + D VV A + L++E Sbjct: 152 -------ILADGGVRYGTDALKLLALGVKAVGVGRPFMYSNVFGVDGVVHAAKILKREIA 204 Query: 314 VSMFLLGTKRVQELYL 329 + G V +L Sbjct: 205 TN---AGNLGVADLKK 217 >gi|288561338|ref|YP_003424824.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] gi|288544048|gb|ADC47932.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] Length = 495 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 114/328 (34%), Gaps = 64/328 (19%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-------PSVEFLGK--- 53 RK + + G+ R FDD ++ ++S +D SV + Sbjct: 101 KRKSQTGSYKVRGCGLTRRIPSFDDLSILP---AQVSRPPIDSYRETCKTSVVLGDRFAE 157 Query: 54 ---KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK---- 106 ++ P++I +M+ G +I LAI + K G ++ + + Sbjct: 158 NPIEIDTPIMIGAMSFGALSKEAKI--ALAIGSSKVGSITNTGEGGMLPEERHYADKLIA 215 Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFG-----------------VQKAHQAVHVLGADGL 149 + ++ ++N AV++ G V + A Sbjct: 216 QYASGRFGVSASYLNNAEAVEIKIGQGAKSGMGGHLLAHKVTAEVARVRNIPEGTSALSP 275 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 H++ I+ P + + VP+++K G D+++ K+G Sbjct: 276 ARHMD----IVGPEDL----GMKINQLREITDWKVPIIVK-FASGRVEQDVKIAAKAGAD 326 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF------IA 263 + G G + + E + GIPT ++ A E +A Sbjct: 327 IIVVDGMQGGTGAGPEVVTEHA----------GIPTIEAIVKADDALKEINLRSEVSLVA 376 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFL 291 +GG+R+G D+ K+I LGA +A+ L Sbjct: 377 AGGIRSGADVAKAIALGADAVYVATSAL 404 >gi|260428992|ref|ZP_05782969.1| (S)-mandelate dehydrogenase [Citreicella sp. SE45] gi|260419615|gb|EEX12868.1| (S)-mandelate dehydrogenase [Citreicella sp. SE45] Length = 377 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 23/149 (15%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + + L+ L+LK V ++ D+ G ++ GG Sbjct: 227 GRKDHLNW-DHLTLMRDLWPGKLVLKGV---IAPADVAQARALGCDAVVMSNHGGRQLDH 282 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 I + AR + + GG+R G D++K++ LGA + Sbjct: 283 A------------------ISPLRIMPEARAQAGDMALLIDGGIRRGTDVIKALALGADM 324 Query: 284 GGLASPFLKPA-MDSSDAVVAAIESLRKE 311 + PFL A + V A E L+ E Sbjct: 325 VLVGRPFLYAATLGGQPMVERAAEILKAE 353 >gi|27228679|ref|NP_758729.1| FMN-dependent dehydrogenase [Pseudomonas resinovorans] gi|219857103|ref|YP_002474135.1| FMN-dependent dehydrogenase [Pseudomonas sp. CA10] gi|26106267|dbj|BAC41707.1| FMN-dependent dehydrogenase [Pseudomonas resinovorans] gi|219689031|dbj|BAH10122.1| FMN-dependent dehydrogenase [Pseudomonas putida] Length = 392 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 109/340 (32%), Gaps = 73/340 (21%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD------HN 103 LG+ L PLLI TG N + + +LA AA + + + + Sbjct: 74 VLGRVLPVPLLIGP-TGYNGLLHRDADIHLARAATARGLPFCLSTAANTSLEALVAAVPE 132 Query: 104 AIKSFEL------RQYAPHTVLISNLGAVQL----------NYDFGVQKAHQAVHVLGAD 147 F+L R + +G+ L N ++ + + + + Sbjct: 133 VNLWFQLYAMGDPRVQNDLLRRAAAVGSRTLLLTCDAMVLGNREWDRRNFAKPRQLAWRN 192 Query: 148 GLFL--HLNPLQEIIQPNGNTNFADL---------------------------SSKIALL 178 L + H LQ+++ P G +L K+A L Sbjct: 193 TLDVLRHPRWLQQVMWPAGLPGMGNLEPYLPLNERNALGSMAFIGRQMDSLLDWDKLARL 252 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 LLLK V L D+E + G+ ++ GG S + + Sbjct: 253 RDQWGERLLLKGV---LHPADVERAIALGLDGVVVSNHGGRQLDGAPSSLAALAAVAPQ- 308 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDS 297 + GG+R G DI+K++ LGA L L A+ Sbjct: 309 ----------------ARGRLSLLLDGGIRRGSDIVKALALGADAVLLGRATLYGVAVAG 352 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A++ L +E + ++ L+G + L + R + Sbjct: 353 EAGAGRALDLLTQELVQTLNLMGCTHLSHLGRDNLWERRR 392 >gi|331698926|ref|YP_004335165.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] gi|326953615|gb|AEA27312.1| (S)-2-hydroxy-acid oxidase [Pseudonocardia dioxanivorans CB1190] Length = 406 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 113/374 (30%), Gaps = 86/374 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + R ++ F L E++ LGK+ + P + TG M Sbjct: 62 ELSLRRARQAFSRVEFTPSVL--RDVSEIETGRTILGKRSTLPFAFAP-TGFTRMMHTEG 118 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 +A A++ + + + + ++ AP L + + + Sbjct: 119 ESAVAAVAQEVGIPFTLSTMGTTTIE-------QIVDIAPDVRRWFQL-YLWRDRAYAKD 170 Query: 136 KAHQAVHVLGADGLFLHLNP------LQEIIQP-------------NGNTNFADLSSK-- 174 +A G D L L ++ L+++ +G + Sbjct: 171 LVQRAADA-GYDTLMLTVDTPVGGARLRDVRNGLTIPPALSLRTFLDGARHPHWWFDMFT 229 Query: 175 --------------------------------IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + L A L++K + S D Sbjct: 230 TEPLAFSNLEGTDGTIAEMINRVFDPALTMADVEWLRGAWPGTLVVKGIQ---SVADARR 286 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + +G ++ GG R +L PT L EA+ + Sbjct: 287 VVDAGADAVLLSNHGGRQLDRAPVPLELIE-----------PTVAELR------GEAEVL 329 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGT 321 G+ +G DI+ +I LGA+ + +L M V ++ LR E ++ L+G Sbjct: 330 VDTGITHGADIVAAIALGANAALVGRAYLYGLMAGGKRGVEKVVQILRGEIERTLALMGV 389 Query: 322 KRVQELYLNTALIR 335 RV +L IR Sbjct: 390 TRVDDLRPEHVRIR 403 >gi|70994688|ref|XP_752121.1| L-lactate dehydrogenase [Aspergillus fumigatus Af293] gi|66849755|gb|EAL90083.1| L-lactate dehydrogenase [Aspergillus fumigatus Af293] gi|159124965|gb|EDP50082.1| L-lactate dehydrogenase [Aspergillus fumigatus A1163] Length = 421 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 102/357 (28%), Gaps = 79/357 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM---------------- 64 N++ F ++ R L + + D + E G K+S P+ + + Sbjct: 56 ANRQAFYRHRIVPRQLVDTNLR--DTTTEIFGHKVSAPIGFAPIGINKIYHPAAEVAVAK 113 Query: 65 ------------TGGNNKMIERINRNLAIAAEKTKV---------------AMAVGSQRV 97 T G+ IE++ ++ A G + Sbjct: 114 VAHELNLPYCLSTAGSTP-IEKVGEANGSGPRFYQLYMPHDEELMLSLLNRAWKSGFDVL 172 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNP 155 + + + A L V ++ +A + D + Sbjct: 173 VLTTDTWQLGWRHDDVANSNYAFYRGIGADLGLTDPVFQKRCQEAGIDIEKDVVAASTKW 232 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRY 210 + + A I L P ++K + S D ++ G+ Sbjct: 233 IDSVWHGR-----AWSWDTIPWLIGKWKSISGGRPFVIKGIQ---SVADARKCVEYGVDG 284 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ G + D +I ++ + G+R Sbjct: 285 IVVSNHAGRQVDGAIASLDALENI-----------------VDAVGDQIYIMYDSGVRGA 327 Query: 271 VDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D++K++ LGA + ++ + V ++SL +F + M + G +++ Sbjct: 328 SDVVKALALGAKFVFVGRLWVWGLSIMGEEGVRHVMKSLLADFDILMGVGGFNSIKD 384 >gi|118464373|ref|YP_882030.1| LldD2 protein [Mycobacterium avium 104] gi|118165660|gb|ABK66557.1| LldD2 protein [Mycobacterium avium 104] Length = 420 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 108/360 (30%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I R ++ F D L V + LG ++ P I+ TG M Sbjct: 60 AEDELSIQRARQAFRDIEFHPTIL--RDVSTVTAGWDVLGGPVALPFGIAP-TGFTRLMH 116 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFE-------------LRQY 113 AA + + ++ + D + K F+ +R+ Sbjct: 117 TEGEIAGVRAAARAGIPFSLSTLGTCAIEDLAAAVPQSRKWFQLYMWKDRERSMALVRRA 176 Query: 114 APHTV---------------LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 A L N + + ++ AV L PL Sbjct: 177 ADAGFDTLLATVDVPVSGARLRDNRNGMTIPPTLTLRTVLDAVPHPKWWFDLLTTEPLAF 236 Query: 159 II---QPNGNTNFADLS-------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + + + + L++K + + D + G Sbjct: 237 ASLDRWPGTVAEYLSTMFDPSLTFDDLEWIKARWPGKLVVKGIQ---TLDDARAVVDRGA 293 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L +PT AR + + G+ Sbjct: 294 DGIVLSNHGGRQLDRAPVPFHL------------LPTV-----ARELGKHTEILLDTGIM 336 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ +I LGA + +L M +A V AIE L + I +M LLG ++EL Sbjct: 337 SGADIVAAIALGARCTLVGRAYLYGLMAGGEAGVTRAIEILAEGVIRTMRLLGVTCLEEL 396 >gi|117164969|emb|CAJ88521.1| putative oxidoreductase [Streptomyces ambofaciens ATCC 23877] Length = 389 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 22/172 (12%) Query: 151 LHLNPLQEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H +P ++ G ++ A +A L D P++LK V L D + +G+ Sbjct: 221 VHEDPNAAVMHFVGMFSDPAKTWPDLAFLRENWDGPIVLKGV---LHPDDARMAADAGMD 277 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + + D + + + G+R Sbjct: 278 GVVVSNHGGRQVAGSVAAADALPRV-----------------VEAAGDRLTVLFDSGVRT 320 Query: 270 GVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLG 320 G D+ K++ LGA L P+ +D V I L E +++ L G Sbjct: 321 GDDVFKALALGARAVLLGRPYAYGLGLDGQAGVEHVIRCLLAELDLTLALSG 372 >gi|296162383|ref|ZP_06845176.1| L-lactate dehydrogenase (cytochrome) [Burkholderia sp. Ch1-1] gi|295887416|gb|EFG67241.1| L-lactate dehydrogenase (cytochrome) [Burkholderia sp. Ch1-1] Length = 394 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 117/365 (32%), Gaps = 76/365 (20%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN + F+ + R L + + D G + P I+ M G + + LA Sbjct: 52 RNLRGFESRAFVPRVL--VDIERRDTRTVLFGVQYESPFGIAPM-GFSRMAAAHADEMLA 108 Query: 81 IAAEKTKVAMAVGSQRVM----FSDHNAIKSFE--LRQYAPHT-VLISNLGAVQLNYDFG 133 AA + V + + A F+ + A +++ + Q +D Sbjct: 109 RAAAEAGVPFILSGASLTPLEAVRVAGATSWFQAYIPGDAARIDPMLARV--AQAGFDTL 166 Query: 134 VQKAHQAVHVLGADGLFLHL------NPLQEIIQPNGNTNFAD------LSSK----IAL 177 V AVH + H +Q Q + L ++ Sbjct: 167 VINVDTAVHG-QHEYAEKHGFRSPARPSVQLAWQALTRPAWCWRVLGESLLTRRPLCFEN 225 Query: 178 LSSAMDVPL----LLKEVG--CGLSSMDIELGLK----------------------SGIR 209 + S P+ L++++G LS +E K +G+ Sbjct: 226 MDSVAGPPVFSRTLVRDIGRRGALSWRHVERIRKRWHGHLVLKGVMAAEDAVLAEKAGVD 285 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG D I + +LE + + GG+R Sbjct: 286 GIIVSNHGGRQV------------------DCAIGSLDALEAIAARVDRLTLMYDGGVRR 327 Query: 270 GVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D+LK++ GA + P L A + + A+ L++E +M LLG + E+ Sbjct: 328 GSDVLKALHCGARFVFVGRPLLLAAAAADMAGIAHALAILKREISTNMGLLGINSIDEVA 387 Query: 329 LNTAL 333 L Sbjct: 388 RLELL 392 >gi|110680548|ref|YP_683555.1| L-lactate dehydrogenase, putative [Roseobacter denitrificans OCh 114] gi|109456664|gb|ABG32869.1| L-lactate dehydrogenase, putative [Roseobacter denitrificans OCh 114] Length = 385 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 55/162 (33%), Gaps = 24/162 (14%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D +A L A D P ++K V L + D E K G+ ++ G + Sbjct: 233 RTSPDWDY-VAWLRDAWDGPFVVKGV---LRAEDAEPLKKRGVDAIWVSNHAGRQFDAAP 288 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + D DI + I G+ G+DIL++ GA Sbjct: 289 ASIDALRDI-------------------RAATDLPLIFDSGIEGGLDILRAYACGADFVM 329 Query: 286 LASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L F A V I+ L K+ +M LG + ++ Sbjct: 330 LGRAFHYALAALGPLGVDHLIDILTKDIEANMGQLGARTLRA 371 >gi|254467501|ref|ZP_05080911.1| L(+)-mandelate dehydrogenase [Rhodobacterales bacterium Y4I] gi|206684502|gb|EDZ44985.1| L(+)-mandelate dehydrogenase [Rhodobacterales bacterium Y4I] Length = 370 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 102/356 (28%), Gaps = 66/356 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G RN+ D L R L ++S + + G + P I+ M G N Sbjct: 32 AGQETGAARNRAALDAITLRPRILRDVSRR--SLAAKVFGAEADRPFGIAPM-GMCNLSA 88 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM-----FSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A + +V V + F+L ++ L Sbjct: 89 PGADLMLARLAARYRVPHGVSTVASTPLETILEAAEGYAWFQL-YFSGDGSGTFKLAERA 147 Query: 124 ---GAVQLNYDFGVQKAHQAVHVL-------------GADGLFLH----------LNPLQ 157 G L V + + L LH P+ Sbjct: 148 RAAGYQTLVLTVDVPEVGRRPRELRHGFKMPFRIGPRQFVDFALHPRWSLTTLLKGKPVM 207 Query: 158 EIIQPNG------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + +G + +A L L++K V L D +G+ Sbjct: 208 ANFEMDGFDFDRTESRARATWDTLAQLRDLWPGKLVVKGV---LDVEDARALAAAGVDAI 264 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ G + ++ + I + GLR+G Sbjct: 265 QVSSHGARQLEAAPAPIEMLAKIRAAL-----------------GPDIPVFYDSGLRSGE 307 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTKRVQE 326 D+LK++ GA L +A + + E+L +E ++M G + Sbjct: 308 DVLKALAAGADFTFLGRILQFAIAAGGEAGLQQLWEALSEELSIAMAQTGLTSLSA 363 >gi|305664630|ref|YP_003860917.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Maribacter sp. HTCC2170] gi|88708647|gb|EAR00883.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Maribacter sp. HTCC2170] Length = 387 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 115/370 (31%), Gaps = 85/370 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + RN + + L+ L +F + E G P I+ + + + Sbjct: 40 CNEEVNLRRNTREIREVQLVPNYLD--NFGQASLKTELFGHVYDAPFGIAPV---GLQGL 94 Query: 73 ERINRN--LAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFEL--------------R 111 N + LA AA + + + + + F+L R Sbjct: 95 MWPNASEILAKAAFENNIPFVLSTVSTSSIERISELTEGKAWFQLYHPTEDSIRNDMLKR 154 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-------- 163 A ++ L + F ++ + + + ++ N LQ +PN Sbjct: 155 AEAAECPVL-VLLCDTPAFGFRPKEIKNGLSM--PPKMSIN-NILQVFGKPNWAFNTLKY 210 Query: 164 GNTNF--------------------------ADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 G NF KIA + ++LK V + Sbjct: 211 GQPNFEVLKPYMPKGLDLGQLGNFMDQTFSKRMSMEKIAPIRDLWKGKIVLKGVS---TE 267 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D E ++ G+ ++ GG ES + I + Y + Sbjct: 268 ADTEKAIQLGLDGIIVSNHGGRQLDAGESTIKPMTRIS-----------------KKYGS 310 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSM 316 + + + GLR+G DI +++ GA L F+ A I L+ + M Sbjct: 311 QIKVLMDSGLRSGPDIARTLASGAEFSFLGRSFMYGVAALGKKGGEHTISLLKTQLQQVM 370 Query: 317 FLLGTKRVQE 326 +G + +++ Sbjct: 371 EQIGCEEIKD 380 >gi|53716375|ref|YP_105174.1| L-lactate dehydrogenase [Burkholderia mallei ATCC 23344] gi|53723139|ref|YP_112124.1| L-lactate dehydrogenase [Burkholderia pseudomallei K96243] gi|76817331|ref|YP_336387.1| L-lactate dehydrogenase [Burkholderia pseudomallei 1710b] gi|121597553|ref|YP_991157.1| L-lactate dehydrogenase [Burkholderia mallei SAVP1] gi|124383006|ref|YP_001025548.1| L-lactate dehydrogenase [Burkholderia mallei NCTC 10229] gi|126446541|ref|YP_001077618.1| L-lactate dehydrogenase [Burkholderia mallei NCTC 10247] gi|167002432|ref|ZP_02268222.1| putative L-lactate dehydrogenase [Burkholderia mallei PRL-20] gi|167744067|ref|ZP_02416841.1| L-lactate dehydrogenase [Burkholderia pseudomallei 14] gi|167821271|ref|ZP_02452951.1| L-lactate dehydrogenase [Burkholderia pseudomallei 91] gi|167829610|ref|ZP_02461081.1| L-lactate dehydrogenase [Burkholderia pseudomallei 9] gi|226193961|ref|ZP_03789562.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|238561808|ref|ZP_00441325.2| L-lactate dehydrogenase (cytochrome) [Burkholderia mallei GB8 horse 4] gi|254177414|ref|ZP_04884070.1| L-lactate dehydrogenase [Burkholderia mallei ATCC 10399] gi|254185717|ref|ZP_04892235.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|254203119|ref|ZP_04909481.1| putative L-lactate dehydrogenase [Burkholderia mallei FMH] gi|254208453|ref|ZP_04914802.1| putative L-lactate dehydrogenase [Burkholderia mallei JHU] gi|254265599|ref|ZP_04956464.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1710a] gi|254300777|ref|ZP_04968221.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 406e] gi|254359369|ref|ZP_04975641.1| putative L-lactate dehydrogenase [Burkholderia mallei 2002721280] gi|52213553|emb|CAH39606.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei K96243] gi|52422345|gb|AAU45915.1| L-lactate dehydrogenase [Burkholderia mallei ATCC 23344] gi|76581804|gb|ABA51278.1| L-lactate dehydrogenase [Burkholderia pseudomallei 1710b] gi|121225351|gb|ABM48882.1| L-lactate dehydrogenase [Burkholderia mallei SAVP1] gi|126239395|gb|ABO02507.1| L-lactate dehydrogenase [Burkholderia mallei NCTC 10247] gi|147746164|gb|EDK53242.1| putative L-lactate dehydrogenase [Burkholderia mallei FMH] gi|147751140|gb|EDK58208.1| putative L-lactate dehydrogenase [Burkholderia mallei JHU] gi|148028556|gb|EDK86516.1| putative L-lactate dehydrogenase [Burkholderia mallei 2002721280] gi|157811126|gb|EDO88296.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 406e] gi|157933403|gb|EDO89073.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei Pasteur 52237] gi|160698454|gb|EDP88424.1| L-lactate dehydrogenase [Burkholderia mallei ATCC 10399] gi|225933906|gb|EEH29892.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei Pakistan 9] gi|238523746|gb|EEP87182.1| L-lactate dehydrogenase (cytochrome) [Burkholderia mallei GB8 horse 4] gi|243061914|gb|EES44100.1| putative L-lactate dehydrogenase [Burkholderia mallei PRL-20] gi|254216601|gb|EET05986.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1710a] gi|261827084|gb|ABM98571.2| L-lactate dehydrogenase [Burkholderia mallei NCTC 10229] Length = 380 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 96/362 (26%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNL-- 123 I A AA V + + + + +R A LI Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGV---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + I + Sbjct: 266 DAGADAIVVSNHGGRQLDGAMSSIEALPAI-----------------VEAAGKRVEVWLD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 309 GGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCTD 368 Query: 324 VQ 325 ++ Sbjct: 369 IR 370 >gi|149370059|ref|ZP_01889910.1| FMN-dependent alpha-hydroxy acid dehydrogenase [unidentified eubacterium SCB49] gi|149356550|gb|EDM45106.1| FMN-dependent alpha-hydroxy acid dehydrogenase [unidentified eubacterium SCB49] Length = 382 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 115/367 (31%), Gaps = 77/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D +D+N+ L+ + L + E G + P I+ + + + Sbjct: 35 CNEDINLDKNRTDLQKIELMPQYLSKFDTSN--LEAELFGHTYAAPFGIAPV---GLQGL 89 Query: 73 ERIN--RNLAIAAEKTKVAMA-----VGSQRVMFSDHNAIKSFEL-------------RQ 112 N LA AA K V S + F+L + Sbjct: 90 MWPNSPEILAKAAFKHNVPFILSTVTTSSIERVAEITEGQSWFQLYHPAEEKVKRDLLDR 149 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL----------------FLHLNP- 155 A + + A + + + + + + L +H P Sbjct: 150 AAQAGTDVLVILADVPTFGYRPRDVRNGLAMPPSMSLKNIIEVFSKPDWAIQTLIHGQPS 209 Query: 156 --LQEIIQPNG----------NTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 E P G + F+ +IA + L++K + ++ MD + Sbjct: 210 FKTMEKYMPKGLNLKKLGEFMDATFSGRLNEDRIASIRDQWKGKLVIKGI---VNEMDAQ 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G+ ++ GG +S + + A+ Y ++ + Sbjct: 267 KAINLGVDGLIVSNHGGRQLDAGQSSIVPMTHL-----------------AKKYGDQIKI 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLG 320 + GLR G DI +++ GA + F+ + I +++EF M L Sbjct: 310 MVDSGLRGGPDIARAMANGAEFTFMGRSFMYGVGALGKEGGNHTISLMKREFQQVMEQLC 369 Query: 321 TKRVQEL 327 +RV++L Sbjct: 370 CERVRDL 376 >gi|118590639|ref|ZP_01548040.1| L-lactate dehydrogenase (cytochrome) [Stappia aggregata IAM 12614] gi|118436615|gb|EAV43255.1| L-lactate dehydrogenase (cytochrome) [Stappia aggregata IAM 12614] Length = 378 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 105/339 (30%), Gaps = 75/339 (22%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIERINRNLAIAAEKTKVA-----MA 91 + D +G+ ++ P+ ++ + TG + E + A AAE+ V M+ Sbjct: 54 CNIDNRSVKTTMVGQDVAMPVALAPVGLTGMQHADGEILA---AQAAEEFGVPFTLSTMS 110 Query: 92 VGSQRVMFSDHNAIKSFEL-----RQYAPHTVLIS---------------NLGAVQLNYD 131 V S + + F+L R ++ + + + LG + Sbjct: 111 VCSIEDVAENTKNPFWFQLYVMRDRGFSENLMQRATDAGCSALVLTLDLQVLGQRHKDLK 170 Query: 132 FGVQKAHQAVHVLGADGLF------------------LHL------NPLQEIIQPNGNTN 167 G+ + + D F +H + N + Sbjct: 171 NGLSTPPKPKPHVLLDLAFKPRWCWNMMQTKRRQFGNIHGHVSGVGDMTSLAEWTNSQFD 230 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S + + S L+LK + D ++ G ++ GG + Sbjct: 231 PTLDWSSVEWVKSHWKRKLILKGIN---DVEDAKIAADVGADAIVVSNHGGRQLDGALAS 287 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ DI + + G+R+G D+ K++ +GA + Sbjct: 288 YEVLQDI-----------------VDAVGDRIEVHFDSGIRSGQDVFKAVAMGAKSTYIG 330 Query: 288 SPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 F+ + V ++ + KE V+M L G + Sbjct: 331 RAFIYGLGAMGKEGVSKVLQIMHKELDVTMGLCGETDIN 369 >gi|115397563|ref|XP_001214373.1| hypothetical protein ATEG_05195 [Aspergillus terreus NIH2624] gi|114192564|gb|EAU34264.1| hypothetical protein ATEG_05195 [Aspergillus terreus NIH2624] Length = 745 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 39/251 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N + + L R L + + DPS LG+K+SFPL +S + + Sbjct: 490 NQVTVAENTTAYTKYRLRPRVL--VDVSQADPSTTVLGQKISFPLCVSPA---GLQAMAH 544 Query: 75 INRNLA--IAAEKTKVAMAVGSQRVM--------------FSDHNAIKSFELRQYAPHTV 118 + LA A K ++ M V S I + + R + Sbjct: 545 PDGELATSRACAKHQIHMGVSSFANHTVEEIRAAGLGVGPIQHAMQIYTMQDRAKQERII 604 Query: 119 LISNL---GAVQLNYD---FGVQKAHQAVHVLGADGLFLH-LNPLQEIIQPNGNTN---- 167 + A+ L D GV+ + GL L E+I+ + + Sbjct: 605 KRAEAAGCKALFLTADSPILGVRYSEHRNDFRSPAGLGFPMLEKTSEMIRSERHEDGFTA 664 Query: 168 ----FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + +I L S ++ + +K V L++ D++L ++ G ++ GG Sbjct: 665 FNSSSHSWAQEIPWLRSVTNMQIWIKGV---LTAEDVQLAVEYGCDGVVVSNHGGRQLDE 721 Query: 224 IESHRDLESDI 234 + D + Sbjct: 722 TPATIDALPEC 732 >gi|304393155|ref|ZP_07375083.1| L-lactate dehydrogenase (cytochrome) [Ahrensia sp. R2A130] gi|303294162|gb|EFL88534.1| L-lactate dehydrogenase (cytochrome) [Ahrensia sp. R2A130] Length = 385 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S I + D L+LK + D ++ G ++ GG + DL Sbjct: 235 WSSIEWVKQRWDRKLILKGIN---DVEDAKIAADIGADAIIVSNHGGRQLDGAAAPIDLL 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + I + + G+R+G DI K+I +GA + ++ Sbjct: 292 AKI-----------------VDAVGDRIEVHLGSGIRSGQDIFKAIAIGAKSTYIGRAYI 334 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 V AA++ +RKE V+M L G +++ Sbjct: 335 YGLGAMGQAGVTAALDVIRKELDVTMALCGESNIKD 370 >gi|148557144|ref|YP_001264726.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] gi|148502334|gb|ABQ70588.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Sphingomonas wittichii RW1] Length = 397 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 103/367 (28%), Gaps = 82/367 (22%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 G RN FD + L RAL + EV VE G+ + P +S++ G N + ++ Sbjct: 38 GPGRNVAAFDRFPLTARAL--VDVREVRQQVEIFGRPYASPFGLSAV-GYANNLRPFADQ 94 Query: 78 NLAIAAEKTKVAMAV-GSQRVMFSDHNAI---KSFELRQYAPHTVLISNLGAVQLNYDFG 133 LA AA + K+ + G + I ++ A + A+ D G Sbjct: 95 MLAEAAMEAKLPFMLSGGSTAAIEEIARIAPGHVWQQLYSAKDPAITDR--AIGRAADAG 152 Query: 134 VQKAHQAVHVLGA---DGLFLHLNPL--------------QEIIQPN---------GNTN 167 V+ V D L L Q P G Sbjct: 153 VEVLVHTVDSPVPPRNDWLARSGIALPAKVRWSAWPYVLWQAATHPRWSLGHLARGGLPR 212 Query: 168 FADL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + L++K + D+ Sbjct: 213 LESWTEYAPAGARAATIARLFQNQVPSVQTWDEVERIRRLWPGRLVIKGLVHAG---DVR 269 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G ++ GG + + D + Sbjct: 270 RARDCGADAVAVSNHGGNKLDVMPAAIDSLCAL-----------------VGTGAPALPL 312 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 GG+R G IL ++ LGA L + A + AI+ L+ E ++ L+G Sbjct: 313 FFDGGVRKGAHILIALALGARFAFAGRAPLYGVIAGGTAGALRAIDILKDEIGRTLALIG 372 Query: 321 TKRVQEL 327 L Sbjct: 373 CPDAAGL 379 >gi|312197022|ref|YP_004017083.1| (S)-2-hydroxy-acid oxidase [Frankia sp. EuI1c] gi|311228358|gb|ADP81213.1| (S)-2-hydroxy-acid oxidase [Frankia sp. EuI1c] Length = 398 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 113/342 (33%), Gaps = 52/342 (15%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N F+ W ++ R + E D + FLG +LS P+L S G ++++ R Sbjct: 72 EQTLRANLSSFERWSVLPRLMTGAG--EPDLACAFLGIELSMPVLTSPF--GADRLLHR- 126 Query: 76 NRNLAIAAE--KTKVAMAV---GSQRVMFSDHNAIKSFELRQYAPHT-----------VL 119 + LA+A K VA V GS A + + Q P Sbjct: 127 DGQLAVARANAKAGVASIVPEAGSYSWEEVATAAPGAARMAQLHPMGNPANFAAMLRRAA 186 Query: 120 ISNLGAVQLNYDFGVQ--KAHQAVHVLGADGLFLHLNPLQE--------IIQPNGNTNFA 169 + A+ L D + + + N + Q Sbjct: 187 AAGFSALCLTLDCPTAGWRERNMRNRFDVAVDVVSGNYPHAGPADLADTLGQLFVRREPI 246 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++A + +P + K + L+ D E + +G ++ GG + + D Sbjct: 247 WTWDELAGRMADSPLPWMAKGI---LTGSDAEAAVLAGAAAVLVSNHGGRQLDTVPAALD 303 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS- 288 ++ G+R G D++K++ LGA + + Sbjct: 304 QLPEV-----------------VAAVGGRVPIALDSGIRRGSDVVKALALGADVVVIGRA 346 Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A + V E LR+E ++ LLG V EL Sbjct: 347 AAMALAAGGEEGVGRLHELLREEISTTIKLLGASGVDELTDT 388 >gi|92116690|ref|YP_576419.1| L-lactate dehydrogenase (cytochrome) [Nitrobacter hamburgensis X14] gi|91799584|gb|ABE61959.1| L-lactate dehydrogenase (cytochrome) [Nitrobacter hamburgensis X14] Length = 381 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 114/362 (31%), Gaps = 70/362 (19%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + N + R L ++ + D + LG+K + PL+++ + G Sbjct: 34 SEQTYRANHEDLQAIRFRQRIL--VNIAKRDLATAILGEKANLPLILAPV-GSTGMQYGD 90 Query: 75 INRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFELRQYAPHTVLI--------S 121 + AA+ + M++ S + F+L + + Sbjct: 91 DEIHACRAAQAAGIPYTLSTMSINSIEDVAESVEKPFWFQLYVMKDRGFVRELIERAMAA 150 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADG----LFLHLNPLQEIIQP--------NGNTNFA 169 A+ L D V + + LF N + I +P NF Sbjct: 151 KCSALVLTVDLQV-LGQRHQDIKNGLSVPPQLFSLANMIDFISKPSWLIGTLRARRRNFG 209 Query: 170 DLSSKI----------ALLSSAMDVPLLLKEVGCG-------------LSSMDIELGLKS 206 +++ + ++ D L ++V L D K Sbjct: 210 NIAGHVKGVDDLGSVAGWVAEQFDATLSWRDVDWIRGIWPGKLVIKGILDVGDAREAAKI 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G + ++ GG +S ++ I ++ + + G Sbjct: 270 GAQALVVSNHGGRQLDGAQSSIEVLPAI-----------------VDAVGSKIEVMFDSG 312 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R+G D+++++ LGA + ++ V A++ + KE V+M L G + Sbjct: 313 IRSGQDVMRALALGARSCMIGRAYVYGLGAFGGPGVTKALDIIAKELSVTMGLCGVNTIA 372 Query: 326 EL 327 E+ Sbjct: 373 EI 374 >gi|89111204|dbj|BAE80293.1| L-lactate dehydrogenase [Acidovorax avenae subsp. avenae] Length = 399 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I + L++K + LS D G ++ GG S + Sbjct: 253 WAHIGAIRQRWKGRLVIKGL---LSVEDALQARGIGADGIVLSNHGGRQLDGAASPMRVL 309 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF- 290 + + G R G D+LK++ LGA + + PF Sbjct: 310 EAV-----------------VAALGPGYPVLIDSGFRRGSDVLKALALGARMVLVGRPFN 352 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + AI LR E ++ +LG EL Sbjct: 353 YAAAVAGEAGIAHAIGLLRDEVDRNLAMLGVTSCAEL 389 >gi|88810370|ref|ZP_01125627.1| L-lactate dehydrogenase [Nitrococcus mobilis Nb-231] gi|88792000|gb|EAR23110.1| L-lactate dehydrogenase [Nitrococcus mobilis Nb-231] Length = 384 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 83/252 (32%), Gaps = 31/252 (12%) Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AA + + + Q + + + P + + NL + + + + Sbjct: 145 AEAARCSALVLTADLQILGQRHKDVRNGLTV----PPRLTLENLIDLATKWHWCLGMLRT 200 Query: 140 AVHVLGADGLFL----HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 G + +L+ L + + + +A + + L++K + + Sbjct: 201 RRRTFGNIAGHVKEASNLDSLSAWTAAQFDPSLSW--DDVAWIKARWGGKLIIKGI---M 255 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D + +G ++ GG S I Sbjct: 256 EPEDAGAAIDAGADAIIVSNHGGRQLDGAPSSIRALPAI-----------------VAAV 298 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIV 314 + + GG+R+G D+LK+I LGA + FL V ++ + +E + Sbjct: 299 GHRTEVYMDGGIRSGQDVLKAIALGAKAVFIGRAFLYGLGAMGEKGVTTCLDLIHRELDI 358 Query: 315 SMFLLGTKRVQE 326 ++ L G + +++ Sbjct: 359 TLALCGLRNIRQ 370 >gi|215427225|ref|ZP_03425144.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T92] gi|289750452|ref|ZP_06509830.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T92] gi|289691039|gb|EFD58468.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T92] Length = 414 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +GVDI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGVDIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|220929751|ref|YP_002506660.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium cellulolyticum H10] gi|220000079|gb|ACL76680.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium cellulolyticum H10] Length = 300 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 109/312 (34%), Gaps = 43/312 (13%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEF--LGKKLSFPLLISSMT-GGNNKMIERINRN 78 +++FD + R D V PS F G+ S P++ ++++ N++ + Sbjct: 18 TRQYFDSLLIEMR-----HIDSVIPSTTFELYGENFSTPIMTAALSHLNNSRANGMV--E 70 Query: 79 LAIAAEKTKVAMAVG-SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 +A A M G A + ++ PH+ + ++ GV Sbjct: 71 MAKGAMAANAVMWTGMGDDAELEAITATGAKTIKIIKPHSDNNTIFKKIEHAEKCGVLAL 130 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + N E G +I +A +P ++K V LS Sbjct: 131 GMDIDH--------SFNNKGEFDNVLGLPMSGKTLDEIKEFVNATKLPFVIKGV---LSE 179 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYC 256 DI L++G++ ++ G D+ +P + L ++AR Sbjct: 180 KDIYKCLEAGVKGIVVSHHHG-------------------IMDFAVPPLMVLPKIARVVD 220 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVS 315 G+ +G+D+ K++ LGA + + + +D V IE + +E Sbjct: 221 RSIPIFVDCGVASGIDVFKALALGADAVSVGLTLIPHLNEAGADGVQNVIEEMTQELAGV 280 Query: 316 MFLLGTKRVQEL 327 M +K + + Sbjct: 281 MARTCSKDIASI 292 >gi|218511026|ref|ZP_03508904.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli Brasil 5] Length = 382 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 76/373 (20%), Positives = 120/373 (32%), Gaps = 62/373 (16%) Query: 8 DHINIVCKDPG-IDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 D+I+ D RN F+ L+ L EVD SV +G+KL+ P+ S T Sbjct: 26 DYIDGAADDEVTYRRNTAAFEACDLVPNVLRG--VAEVDMSVTVMGQKLAMPVYCSP-TA 82 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQYAPHTVLISNLG 124 + R +A AA K V S + + S ++ Q+ H N Sbjct: 83 LQRLFHHQGERAVAAAAAKHGTMFGVSSLGTISLEEARQISAGPQVYQFYFHKDRGLNHE 142 Query: 125 AVQLNYDFGVQKAHQAVHVLGAD----------GLFLHLNPLQEIIQPNGNTNFA-DLSS 173 + + GVQ V + + LN L + Q ++A + Sbjct: 143 MMARAKNAGVQAMMLTVDSITGGNRERDKRTGFAIPFKLN-LAGVTQFAIKPSWAIGWLT 201 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS----------- 222 +P L V + L R D+ GR G + Sbjct: 202 H-----ERFALPQLENHVKMDGGGAVDQPLLHRNARSLDVVGRCGGDGACLGRPFLPEGH 256 Query: 223 ------------------RIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIA 263 ++S R + + SL + + Sbjct: 257 HVGRRRQTRRRHRLHRHRAVQSWRAPARRLTERLR--------SLAEIVDAVGDRIDVMM 308 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG++ G +LK++ LGA GL +L P A V A+E++R E M L+G Sbjct: 309 DGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGRPGVERALETMRTEIERGMKLMGCT 368 Query: 323 RVQELYLNTALIR 335 V +L R Sbjct: 369 SVDQLTRRNLRFR 381 >gi|46200046|ref|YP_005713.1| lactate 2-monooxygenase [Thermus thermophilus HB27] gi|46197674|gb|AAS82086.1| lactate 2-monooxygenase [Thermus thermophilus HB27] Length = 430 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ + + +PLLLK + L D ++ G+ ++ GG R ++ Sbjct: 275 WEEVRRVRESTALPLLLKGI---LHPEDALRAVELGVDGVYVSNHGG---------RQVD 322 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + +P ++ + + G+R G D +K++ LGA GL P++ Sbjct: 323 GSLAALHA---LP-----QVVQAVEGRVPVLMDSGVRTGADAVKALALGARAVGLGRPYV 374 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ + V A ++ E +++ L G ++EL Sbjct: 375 YALALGGEEGVGAFLDHFLAELELTLALSGVGSLEEL 411 >gi|126737325|ref|ZP_01753060.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. SK209-2-6] gi|126721910|gb|EBA18613.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. SK209-2-6] Length = 381 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 111/372 (29%), Gaps = 78/372 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 ++ G+ N+ D + L + + LG+ P I+ M+G Sbjct: 35 RELGLKVNRDALDAVGFMPSVL--CGRTKANLQTNLLGQCYDLPFGIAPVGMSGLMWAGA 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQ--------RVMFSDHNAIKSFELRQYAPHTVLISNLG 124 E R LA AA + ++ S + + + + ++ + Sbjct: 93 E---RMLAQAAVAHNIPFSLSSVAVASPEDVSPYIGQNGWFQHYPVNSADLRRKMLPRIK 149 Query: 125 AVQL---------------------NYDFGVQKAHQAVHVLGA----------DGLFLHL 153 A N + + + + A +G+ + Sbjct: 150 AAGFHTLIITVDVPEESRRERQRRANLTVPPKTDLRTLTEMAARPTWCLAHLREGIIPRM 209 Query: 154 NPLQEIIQPNGNTNF-------ADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + G +F + + L D L++K V L D + + Sbjct: 210 RFFDDYVPQRGRESFTHAGALIRGIPDWRYLQELRGEWDGHLIVKGV---LRPEDAQRMV 266 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ G + + D I + I Sbjct: 267 DLGADCIWVSNHSGRQFEAGPAVIDQLPKIRE-----------------AVGPDVPLIYD 309 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+ G+DI++++ GA+ + F A + + + L+ + +M LG ++ Sbjct: 310 SGIAWGLDIMRALAKGANFVMVGRAFQYAVAAFGAKGIDHLVHVLKADVAANMSQLGVEQ 369 Query: 324 VQELYLNTALIR 335 + +L + L++ Sbjct: 370 LGQL--SQYLLK 379 >gi|294678564|ref|YP_003579179.1| L-lactate dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294477384|gb|ADE86772.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter capsulatus SB 1003] Length = 387 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 21/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 KIA + +LK + L + D G ++ GG S + Sbjct: 235 WKKIARIRDQWGGKFILKGI---LDAEDARAAADFGADAIIVSNHGGRQLDGALSSIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I ++ + G+R+G DILK++ LGA + ++ Sbjct: 292 PEI-----------------VAAVGDKTEVWLDSGIRSGQDILKALALGAKGTMIGRAYV 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +A V A+E +RKE +SM L G KRVQ+L + L+ Sbjct: 335 HGLGAMGEAGVTRALEVMRKELDISMALCGEKRVQDLGRDNLLV 378 >gi|297204295|ref|ZP_06921692.1| L-lactate oxidase [Streptomyces sviceus ATCC 29083] gi|197715850|gb|EDY59884.1| L-lactate oxidase [Streptomyces sviceus ATCC 29083] Length = 389 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 22/177 (12%) Query: 151 LHLNPLQEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H +P ++ G + +ALL D P++LK V L D L +G+ Sbjct: 221 VHEDPNAAVLHFVGMFADPGKTWPDLALLRENWDGPIVLKGV---LHPDDARLAADAGMD 277 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + + D + + + G+R Sbjct: 278 GVVVSNHGGRQVAGAVAAADALPRV-----------------VEAVGDRLTVLFDSGVRT 320 Query: 270 GVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 G D+ K++ LGA L P++ +D V I L E +++ L G Sbjct: 321 GDDVFKALALGARAVLLGRPYVYGLGLDGQAGVEHVIRCLLAELDLTLALSGHASPA 377 >gi|291299021|ref|YP_003510299.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stackebrandtia nassauensis DSM 44728] gi|290568241|gb|ADD41206.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Stackebrandtia nassauensis DSM 44728] Length = 342 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 107/325 (32%), Gaps = 57/325 (17%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV 88 L R L V + LG+ + P+L++ T ++R+ + +A Sbjct: 43 LRLRPRVL--RDVSTVSTATTVLGQPVDTPVLVAPTT------LQRLAHDEGESATARGA 94 Query: 89 AMAVGSQRVMFSDHNAIKS-FEL--RQYAPHTVLISNLGAVQLNYD-------------- 131 A S + + FE+ RQ AP V + + + Sbjct: 95 A----SAGSLLEVSTNAGTRFEVLGRQGAPWWVQAYIVRDRGFSVEVLKRAKAAGAGAVV 150 Query: 132 --FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK------IALLSSAMD 183 + + + + + LQ + +G + A ++ I L + Sbjct: 151 LTVDTPEVGHKLQAGDSVWDLVTGDQLQANLDTDGLPDGALDKARDLTFADIGWLRETVG 210 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+++K V G D + +G ++ GG S +I G Sbjct: 211 LPVVVKGVLRG---DDARECVAAGAAAVQVSNHGGRQLDGAVSTARALPEIVRALDGTG- 266 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVV 302 A+ GGLR G IL ++ LGA+ + P L +D +D V Sbjct: 267 ---------------AEVYVDGGLRRGSHILAALALGATAVFVGRPVLWALTVDGADGVR 311 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + L E +M L G + +L Sbjct: 312 RLLADLTGELRHAMTLAGAASLDDL 336 >gi|169604484|ref|XP_001795663.1| hypothetical protein SNOG_05255 [Phaeosphaeria nodorum SN15] gi|111066526|gb|EAT87646.1| hypothetical protein SNOG_05255 [Phaeosphaeria nodorum SN15] Length = 421 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 111/370 (30%), Gaps = 74/370 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N++ F ++ R L + ++ D + G K+ P+ + + G NK+ Sbjct: 62 AGSSHTHAANRQAFYRHRIVPRML--VDTNQRDTATHIFGHKVPAPIGFAPI--GINKIY 117 Query: 73 ERINRNL--AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL------- 123 + L A A + + + + + + + V L Sbjct: 118 HP-DGELPVARVAGELGLPYCLSTAGSQPIEAVGQANDAGARGEGDGVRFFQLYMPHDDE 176 Query: 124 ---GAVQLNYDFGVQKAH----------QAVHVLGADGLFLHL--------NPL------ 156 +Q D G + V ++ F H +P+ Sbjct: 177 LTRSLLQRAADSGFTACILMLDTWQLGWRHDDVATSNYAFYHGRGADLGLSDPVFQRRLR 236 Query: 157 QEIIQPNGNTNFAD--LSSKI-ALLSSAMDVPL----LLKEVGCGL--------SSMDIE 201 ++ I P+ N A + + D + L KE+ G S D Sbjct: 237 EKGIDPHTQPNEAGAMWIDNVWHGRAHTWDKAVWAMELWKEISGGKPFCLKGIQSVEDAR 296 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + ++ G ++ G + D I ++ Sbjct: 297 MAVERGFDGIVVSNHAGRQVDGAVASLDCLERI-----------------VDAVGDKIYI 339 Query: 262 IASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 + G+R+ D+ K++ LGA + ++ V + SL + + M + G Sbjct: 340 MYDSGVRSASDVFKALALGAKFVFVGRLWVWGLSIMGEAGVRHVMRSLLADLDILMNVAG 399 Query: 321 TKRVQELYLN 330 + +Q++ + Sbjct: 400 FQNIQQITRD 409 >gi|145296919|ref|YP_001139740.1| hypothetical protein cgR_2819 [Corynebacterium glutamicum R] gi|140846839|dbj|BAF55838.1| hypothetical protein [Corynebacterium glutamicum R] Length = 420 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 107/368 (29%), Gaps = 84/368 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSM------- 64 + I R ++ F++ L P + VD + + LG S P I+ Sbjct: 59 AEAELSIKRAREAFENIEFHPDILKP---AEHVDTTTQILGGTSSMPFGIAPTGFTRLMQ 115 Query: 65 ---------------------TGGNN-----KMIER---------------INRNLAIAA 83 T G K I+ L A Sbjct: 116 TEGEIAGAGAAGAAGIPFTLSTLGTTSIEDVKATNPNGRNWFQLYVMRDREISYGLVERA 175 Query: 84 EKTK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 K + V + + ++ F + + +++ + DF Sbjct: 176 AKAGFDTLMFTVDTPIAGYRIRDSRNGFSIPPQLTPSTVLNAIPRPWWWIDF------LT 229 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 L L + +++ + + + ++ L++K V + D Sbjct: 230 TPTLEFASLSSTGGTVGDLLNSAMDPTIS--YEDLKVIREMWPGKLVVKGVQ---NVADS 284 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 L G+ ++ GG R L + + +E Sbjct: 285 VKLLDQGVDGLILSNHGGRQLDRAPVPFHLLPQV-----------------RKEVGSEPT 327 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + G+ NG DI+ ++ +GA + +L M + V I LR E +M LL Sbjct: 328 IMIDTGIMNGADIVAAVAMGADFTLIGRAYLYGLMAGGREGVDRTIAILRSEINRTMALL 387 Query: 320 GTKRVQEL 327 G ++EL Sbjct: 388 GVSSLEEL 395 >gi|167899721|ref|ZP_02487122.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 7894] Length = 377 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 99/366 (27%), Gaps = 79/366 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNL-- 123 I A AA V + + + + +R A LI Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V ++ + L Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGVLDADDALRADDAL 268 Query: 205 KSGIRY---FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQ 260 ++ ++ GG + + +L + + Sbjct: 269 RAADAGADAIVVSNHGGRQLDGA------------------MSSVEALPAIVEAAGKRVE 310 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLL 319 GG+R G D+LK++ LGA + FL A A+E + +E +M L Sbjct: 311 VWLDGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALC 370 Query: 320 GTKRVQ 325 G ++ Sbjct: 371 GCTDIR 376 >gi|260427620|ref|ZP_05781599.1| L-lactate dehydrogenase (cytochrome) [Citreicella sp. SE45] gi|260422112|gb|EEX15363.1| L-lactate dehydrogenase (cytochrome) [Citreicella sp. SE45] Length = 388 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 112/372 (30%), Gaps = 79/372 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FDD +L R I + + +G+ ++ P+ ++ + TG + E Sbjct: 33 EQTFRENSSDFDDLYLRQRV--AIDMTGRSTATQLIGQDVAMPVALAPVGLTGMQHADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRV--------MFSDHNAIKSFELRQYAPHTVLI----- 120 + A AAE V + + + S ++ + L+ L Sbjct: 91 ILA---AKAAETFGVPYTLSTMSICSIEDVAEHTSKPFWLQVYTLKDDDFMQRLFDRAKD 147 Query: 121 SNLGAVQLNYDF--------GVQKAHQAVHVLGADGL---FLHLNPLQEIIQPNGNTNFA 169 + A + D ++ A L A + + E++Q F Sbjct: 148 AKCSAAVITVDLQMLGQRHKDIKNGLSAPPKLTARSILDMSWRVAWGLEMLQTK-RRFFG 206 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ +I D PL++K + L D Sbjct: 207 NIVGHAAGVDDPSSLSTWTAESFDQALNWDRIREFRKMWDGPLIIKGI---LDPRDALEA 263 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 L G ++ GG S I + + Sbjct: 264 LNVGADAIVVSNHGGRQLDGALSSIRALGPIMD-----------------AVGDRIEVHL 306 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R+G D+LK++ +GA + ++ V A+ + KE SM L G Sbjct: 307 DSGVRSGQDVLKAVAMGAKGCWIGRAYIYGLGAMGEKGVSEALRVIHKELDTSMGLCGRT 366 Query: 323 RVQELYLNTALI 334 + + + ++ Sbjct: 367 DINAVNRDILMV 378 >gi|21911429|gb|AAM80552.1| Hmo [Streptomyces toyocaensis] Length = 366 Score = 86.5 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 112/351 (31%), Gaps = 53/351 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + +D N+ D L+ R L ++S D L + + P+ ++ + +++ Sbjct: 40 AEVTLDANRTALDRVFLVPRVLRDVSRCTAD--STLLKRPVPMPVAVAPVA--YQQLVHP 95 Query: 75 INRNLAIAAEKT-KVAM-AVGSQRVMFSDHNAIKS------FELRQYAPHTVLI---SNL 123 A A K V A V + AI + LR A L+ + Sbjct: 96 DGERAAARAAKAAGVPFTASTLSSVPIEELTAIGGTVWFQLYRLRDAAQSLELVRRAEDA 155 Query: 124 GAVQLNYDFGVQK-AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD------------ 170 G + V + V L H+ + AD Sbjct: 156 GCEAIMLTVDVPWMGRRLRDVRNRFALPSHVRAANISTGSTAHRRHADSSAVAVHTGQAF 215 Query: 171 ----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 S +A L +PLLLK V L++ D ++SG+ ++ GG Sbjct: 216 SSATTWSSLAALRKQTRLPLLLKGV---LAAEDAVRAVESGVDAVVVSNHGGRQLDGAVP 272 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 D+ ++ D + + G+R+G D+L+++ LGAS + Sbjct: 273 SIDVLPEVAAAVND-----------------GCEVLLDSGIRSGTDVLRALALGASGVLV 315 Query: 287 ASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P A ++ L E ++ L G V L+ Sbjct: 316 GRPLIWGLAAAGEAGARRVLDLLADELRDALGLSGCDGVAAARQLRTLVPG 366 >gi|319653348|ref|ZP_08007449.1| hypothetical protein HMPREF1013_04066 [Bacillus sp. 2_A_57_CT2] gi|317394997|gb|EFV75734.1| hypothetical protein HMPREF1013_04066 [Bacillus sp. 2_A_57_CT2] Length = 471 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 124/373 (33%), Gaps = 85/373 (22%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 FD+ I P ++VD V K K+ PL+IS M G + E++ Sbjct: 92 FDEITFIPAQTSPFPIDGDEDVDVKVTIGPKAKKPMKIKIPLMISGMAYG-IALSEQVKI 150 Query: 78 NLAIAAEKTKVAM-------------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG 124 LA AA+ T A+ + G + FS K + + A + G Sbjct: 151 ALATAAKNTGTAVNSGEGGILPEELESAGKYILQFSKTEWGKEEKTIKRADMIEIKLGQG 210 Query: 125 AV-----QLNYDFGVQKAHQAVHVLGADG--LFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 AV ++ + +A + + + + + H Q + DL + Sbjct: 211 AVMGMGGNISPENLTGRAREVMGLKENETAHIMEHFFDKQTL---------KDLKELVDE 261 Query: 178 LSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L S VP+ K G DI+ ++ G+ + + G G S + Sbjct: 262 LRSMTGGVPIGAKIGAGGKIEEDIDHLIEMGVDFIAVDGGQGASVGAPP----------L 311 Query: 237 VFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + D+GIPT +L R E I SGGL LK + LGA L S Sbjct: 312 LSDDFGIPTLHALIRASNHLEKRKKKGEISLIVSGGLFTPGHFLKVLALGADAVYLGSVM 371 Query: 291 LKPA------------------------------MDSSDAVVAAIESLRKEFIVSMFLLG 320 L D + + + + +E +++ +G Sbjct: 372 LFTVSHKQTLNSLPFEPPTQSVWNEGKFKDTFKIEDGTKSAEKFLTASTEEIKMALRAMG 431 Query: 321 TKRVQELYLNTAL 333 K ++EL + Sbjct: 432 KKTLKELSKKDLV 444 >gi|115613552|ref|XP_001192192.1| PREDICTED: similar to Hao1 protein, partial [Strongylocentrotus purpuratus] gi|115936083|ref|XP_001188533.1| PREDICTED: similar to Hao1 protein, partial [Strongylocentrotus purpuratus] Length = 314 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 86/308 (27%), Gaps = 61/308 (19%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--------------SMTGGNNKMIER 74 + + R L + + LG+ + +P+ IS + G Sbjct: 1 YRIRSRVLQ--DVSKRCLATTVLGQSIPYPICISPTAFHFFAHPDGEEATAKGAEAAGAL 58 Query: 75 INRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFELRQYAPHTVL---------IS 121 + + + VAMA + + + +R+ + Sbjct: 59 MILSCGACSSMEDVAMAAPGGLRWMNIYPFTDRQLTEYTIRKAEKLGFKALVVTVDSPVP 118 Query: 122 NLGAVQLNYDFGVQKAHQAV--------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 +GAV + V + + H + E+ N Sbjct: 119 GIGAVSEHEQLNHPSHRMPVYEADIPSARAAKQESITNHFKYVDEM---ESNPKATW--E 173 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I + +P++ K + L++ +G+ ++ GG + D ++ Sbjct: 174 YIRWIKKVTSLPVVCKGI---LTAESASDAANAGVDGILVSAHGGRQLESSPAPIDALAE 230 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + G + GG+R G D+ K++ GA L P L Sbjct: 231 VVEAVHGRG----------------VEIYMDGGVRTGTDVFKALGRGARAVFLGRPILWG 274 Query: 294 AMDSSDAV 301 S+ Sbjct: 275 LACQSEKT 282 >gi|300309586|ref|YP_003773678.1| FMN-dependent L-lactate dehydrogenase [Herbaspirillum seropedicae SmR1] gi|300072371|gb|ADJ61770.1| FMN-dependent L-lactate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 413 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 113/373 (30%), Gaps = 87/373 (23%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVE-----FLGKKLSFPLLISSMTGG 67 ++ + N++ F + R L VD SV G+ ++ P LI TG Sbjct: 60 AEEEISLRHNREVFTRIGFLPRTL-------VDVSVRRQGRRLFGQDIASPFLIGP-TGF 111 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----------FELRQYAPHT 117 + + + +A AA V + + + +S + R + Sbjct: 112 SGLLAREGDVAMASAAASAGVPFVLTNVSTTSLEEVVRRSGAQVWQQVYLYRDRAFVASV 171 Query: 118 VLISN---LGAVQLNYDFGVQKAH----------QAVHVLGADGLFLHLNPLQEIIQPNG 164 + +G + L D V + + + H L +I+ P+G Sbjct: 172 AQRAQAAGIGVLVLTTDSAVYGKREWDARNFSSPRRLDWRNKLDVLRHPRWLIDILYPHG 231 Query: 165 NTNFADL----------------------------SSKIALLSSAMDVPLLLKEVGCGLS 196 FA+L + + L L+LK V + Sbjct: 232 FPRFANLGDLLPPDQTSVRGAAAAILGQSLSAALDWADVQWLRGIWPGKLVLKGV---MQ 288 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPY 255 D + + G+ ++ GG + T L E+ Sbjct: 289 VEDAQRAVALGVDGIVLSNHGGRQLDGA------------------LSTMDVLPEVVAAV 330 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV-AAIESLRKEFIV 314 + + GG R G DI+K+I LGA L A A+E LR E Sbjct: 331 KGQLTVMLDGGFRRGADIVKAIALGADAVLLGRATTYGLAAGGQAGATRALEILRSEVDR 390 Query: 315 SMFLLGTKRVQEL 327 + LL + +L Sbjct: 391 VLALLACPDIDQL 403 >gi|317405332|gb|EFV85654.1| L-lactate dehydrogenase [Achromobacter xylosoxidans C54] Length = 388 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 22/150 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + L++K + L D L + G ++ GG Sbjct: 259 WEHVARIRRQWPGTLIIKGI---LHPQDARLAREHGADGIIVSNHGGRQLDGA------- 308 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF- 290 I +L + G+R G D+LK++ LGA + PF Sbjct: 309 -----------ISPLRALPGVVAEAGAMPVMMDSGVRRGGDVLKALALGARFVFVGRPFN 357 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 A+ V AI LR E +M +LG Sbjct: 358 YAAAVGGQAGVAHAIGLLRAEVDRNMAMLG 387 >gi|307327717|ref|ZP_07606901.1| Lactate 2-monooxygenase [Streptomyces violaceusniger Tu 4113] gi|306886615|gb|EFN17617.1| Lactate 2-monooxygenase [Streptomyces violaceusniger Tu 4113] Length = 395 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 21/157 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P++LK V L D ++G+ ++ GG D Sbjct: 253 WEDLAFLREQWDGPIVLKGV---LHPDDARRAEEAGMDGVVVSNHGGRQVGGSIGAADAL 309 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + + G+R G D+ K++ LGA L P+ Sbjct: 310 PGV-----------------VAAVGDRLAVLFDSGVRTGDDVFKALALGARAVLLGRPYA 352 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 +D V I SL EF ++M L G L Sbjct: 353 YGLGLDGQPGVEHVIRSLLAEFELTMALSGHADAAGL 389 >gi|254775319|ref|ZP_05216835.1| LldD2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 411 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + + L++K + + D + G ++ GG R L Sbjct: 252 DDLEWIKARWPGKLVVKGIQ---TLDDARAVVDRGADGIVLSNHGGRQLDRAPVPFHL-- 306 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +PT AR + + G+ +G DI+ +I LGA + +L Sbjct: 307 ----------LPTV-----ARELGKHTEILLDTGIMSGADIVAAIALGARCTLVGRAYLY 351 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L + I +M LLG ++EL Sbjct: 352 GLMAGGEAGVTRAIEILAEGVIRTMRLLGVTCLEEL 387 >gi|260576421|ref|ZP_05844411.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sp. SW2] gi|259021304|gb|EEW24610.1| L-lactate dehydrogenase (cytochrome) [Rhodobacter sp. SW2] Length = 387 Score = 86.1 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 21/166 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +KIA + L+LK + + G ++ GG S + Sbjct: 235 WTKIARIRDQWGGKLILKGILDADDARLAADF---GADAIIVSNHGGRQLDGALSAIRML 291 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GG+R+G D+LK++ LGA + ++ Sbjct: 292 PSI-----------------VAAVGERIEVHMDGGIRSGQDVLKALALGAKGTWIGRSYI 334 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A V A+E ++KE VSM L G + V+ L L+ Sbjct: 335 YGLGAMGEAGVSKALEVIQKELDVSMALCGERDVKSLRRENLLVPR 380 >gi|126726600|ref|ZP_01742440.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodobacterales bacterium HTCC2150] gi|126703929|gb|EBA03022.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhodobacterales bacterium HTCC2150] Length = 405 Score = 86.1 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 22/164 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + D P++ K V + + +G+ ++ GG + + + D Sbjct: 259 LKQLQTEWDGPIIAKGV---MDPDAAVVLASAGVDAIWVSNHGGRQFDAAPASISVLPD- 314 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-P 293 I T I GG+R G+D+L++ GA+ L Sbjct: 315 --------IRTA--------VGPSFPIIFDGGIRTGLDVLRAFAHGANFAMLGRAHHYGL 358 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 A L ++ +M +G + +N+ + + + Sbjct: 359 AAFGEKGAAHVSHILSEDMKSAMAQMGINSPSD-AVNSLVQKGE 401 >gi|15609009|ref|NP_216388.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium tuberculosis H37Rv] gi|15841341|ref|NP_336378.1| L-lactate dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|148661678|ref|YP_001283201.1| L-lactate dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148823083|ref|YP_001287837.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis F11] gi|167970354|ref|ZP_02552631.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis H37Ra] gi|253799084|ref|YP_003032085.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 1435] gi|254232049|ref|ZP_04925376.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis C] gi|254364693|ref|ZP_04980739.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis str. Haarlem] gi|289554354|ref|ZP_06443564.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 605] gi|297634433|ref|ZP_06952213.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 4207] gi|297731420|ref|ZP_06960538.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN R506] gi|306776092|ref|ZP_07414429.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu001] gi|306779872|ref|ZP_07418209.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu002] gi|306784615|ref|ZP_07422937.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu003] gi|306788977|ref|ZP_07427299.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu004] gi|306793313|ref|ZP_07431615.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu005] gi|306797690|ref|ZP_07435992.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu006] gi|306803579|ref|ZP_07440247.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu008] gi|306808153|ref|ZP_07444821.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu007] gi|306967967|ref|ZP_07480628.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu009] gi|306972202|ref|ZP_07484863.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu010] gi|307079911|ref|ZP_07489081.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu011] gi|307084489|ref|ZP_07493602.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu012] gi|313658754|ref|ZP_07815634.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN V2475] gi|81671710|sp|P95143|LLDD2_MYCTU RecName: Full=Putative L-lactate dehydrogenase [cytochrome] 2 gi|3261680|emb|CAB06144.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD2 [Mycobacterium tuberculosis H37Rv] gi|13881574|gb|AAK46192.1| L-lactate dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|124601108|gb|EAY60118.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis C] gi|134150207|gb|EBA42252.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis str. Haarlem] gi|148505830|gb|ABQ73639.1| L-lactate dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148721610|gb|ABR06235.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis F11] gi|253320587|gb|ACT25190.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 1435] gi|289438986|gb|EFD21479.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 605] gi|308215463|gb|EFO74862.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu001] gi|308327233|gb|EFP16084.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu002] gi|308330656|gb|EFP19507.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu003] gi|308334502|gb|EFP23353.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu004] gi|308338295|gb|EFP27146.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu005] gi|308341985|gb|EFP30836.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu006] gi|308345466|gb|EFP34317.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu007] gi|308349768|gb|EFP38619.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu008] gi|308354408|gb|EFP43259.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu009] gi|308358341|gb|EFP47192.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu010] gi|308362244|gb|EFP51095.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu011] gi|308365920|gb|EFP54771.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis SUMu012] gi|323719613|gb|EGB28736.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CDC1551A] gi|328458839|gb|AEB04262.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis KZN 4207] Length = 414 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|298249888|ref|ZP_06973692.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ktedonobacter racemifer DSM 44963] gi|297547892|gb|EFH81759.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ktedonobacter racemifer DSM 44963] Length = 390 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 102/325 (31%), Gaps = 62/325 (19%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N F W ++ R L + E D S++ K+ P+L++ + G + + Sbjct: 58 DSMRANLAAFQRWRIVPRML--RNVAERDLSIQLFNKRYPVPVLLAPI-GVQSIVHTEAE 114 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDH------NAIKSFEL-----RQYAPHTVLIS-NLG 124 A AA + + + +A + F+L ++ V + G Sbjct: 115 TGTARAAASVGLPFIFSTASSTPLEQVAQAMGDAPRWFQLYWSKDPEFNQSIVQRAERAG 174 Query: 125 AVQLNYDFGVQK-AHQAVHVLGADGLFL----------------------HLNPLQEIIQ 161 + A + + A F+ +NP QE IQ Sbjct: 175 CEAIVVTLDTYLLAWRPSDIQNAYLPFILGQGIGNYLSDPAFRKGLSQPPEVNP-QEAIQ 233 Query: 162 P--NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 TN + +A L +P+LLK + L D + SG+ ++ GG Sbjct: 234 RFLAIFTNPSLTWQDLATLRQQTKLPILLKGI---LHPDDARKAIDSGMDGVIVSNHGGR 290 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + D I E + G+R D+LK++ L Sbjct: 291 QVEGAIASLDALPAISE-----------------AVRGEVPILLDSGIRQASDVLKAVAL 333 Query: 280 GASLGGLASP-FLKPAMDSSDAVVA 303 GA L P A++ V Sbjct: 334 GAQAVLLGRPYMWALALNGEQGVRE 358 >gi|218296083|ref|ZP_03496852.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermus aquaticus Y51MC23] gi|218243460|gb|EED09989.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Thermus aquaticus Y51MC23] Length = 470 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 70/388 (18%), Positives = 118/388 (30%), Gaps = 98/388 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N++ FD + L+ R L VE G++ + PL + + G ++ Sbjct: 49 AGLERTMAANRQAFDRYRLLPRMLRGAKPPG--LEVELWGRRWAAPLFLCPI--GVLELA 104 Query: 73 ER-INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL------GA 125 + A AA +T V V +Q R+ P V+ L A Sbjct: 105 HPEADLAAARAAARTGVPFMVSNQSSY---PLERVVAAAREANPEAVVFFQLYHSTDRRA 161 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFL----------HLNPL--QEIIQPNGNTNFADLSS 173 VQ ++ A VL D + L HL L Q I Q + F Sbjct: 162 VQSFLRR-AEEVGCAGVVLTVDTVQLGWRPRDLDLAHLPFLKGQGIAQYLTDPAFLGALD 220 Query: 174 KIALLSSAMDVPL-----------------------LLKEVGCG--------LSSMDIEL 202 + P + K V LS D+E Sbjct: 221 EPLEGPPFRPKPTLALLKNLLALRQTGKRYGLDLSRMQKAVRRFVATYSFPELSWEDVER 280 Query: 203 GLKS----------------------GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 ++ G ++ GG + + I Sbjct: 281 VREATRLPLLLKGLLHPEDAVRAVDLGADGVYVSNHGGRQVDGSLAALEALPAI------ 334 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSD 299 AR ++ + G+R G D +K++ LGA GL P+ A+ + Sbjct: 335 -----------ARAVGDKVPVLMDSGVRTGADAVKALALGARAVGLGRPYAYGLALGGEE 383 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V A + + E +++ L G + + EL Sbjct: 384 GVRAVLAHVLAELELTLALSGVRSLAEL 411 >gi|260186837|ref|ZP_05764311.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis CPHL_A] gi|289447486|ref|ZP_06437230.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CPHL_A] gi|289420444|gb|EFD17645.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis CPHL_A] Length = 414 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|218753579|ref|ZP_03532375.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] gi|289762022|ref|ZP_06521400.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] gi|289709528|gb|EFD73544.1| L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis GM 1503] Length = 414 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|254550883|ref|ZP_05141330.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 414 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|215403824|ref|ZP_03416005.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis 02_1987] gi|215411542|ref|ZP_03420338.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis 94_M4241A] gi|215446063|ref|ZP_03432815.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T85] gi|289745696|ref|ZP_06505074.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis 02_1987] gi|289757979|ref|ZP_06517357.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T85] gi|294996781|ref|ZP_06802472.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis 210] gi|298525364|ref|ZP_07012773.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis 94_M4241A] gi|289686224|gb|EFD53712.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis 02_1987] gi|289713543|gb|EFD77555.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T85] gi|298495158|gb|EFI30452.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis 94_M4241A] gi|326903474|gb|EGE50407.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis W-148] Length = 414 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|220932566|ref|YP_002509474.1| glutamate synthase (NADPH) large subunit [Halothermothrix orenii H 168] gi|219993876|gb|ACL70479.1| glutamate synthase (NADPH) large subunit [Halothermothrix orenii H 168] Length = 437 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 104/292 (35%), Gaps = 48/292 (16%) Query: 36 LPEISFDEVDPSVEFLG------KKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKV 88 +P + +VD SV LG L P++IS M+ GG +I LA A Sbjct: 82 MPTVDSVQVDTSVT-LGPGASKPLTLDIPIMISGMSYGGALSKKAKI--ALARGASLMGT 138 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYA----PHTVLISNLGAVQLNYDFGVQKAHQAV--- 141 A G + + + + + QY ++ L V++ G Q Sbjct: 139 ATNSG-EAPLLEEEREAACYFIGQYNRGGWMTGDMLQKLDMVEIQVGQGAQAGAPMKTKS 197 Query: 142 HVLGADG-LFLHLNPLQEIIQPN---GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + +G + HLN Q + G + D + L +DVP+ LK Sbjct: 198 NKIGPEFRKSFHLNKGQNALIDGRLPGINSAEDFIELVKRLKEKVDVPVGLKFAATHHLE 257 Query: 198 MDIELGLKSGIRYFDIAG-----RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL--- 249 ++ + +++G+ + + G GG + +G+PT +L Sbjct: 258 KELAIAVEAGVDFITVDGAEAGTHGGPTILE---------------DHFGLPTLHALCRT 302 Query: 250 ---EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 ++ IASGGL LK++ LGA + + + + S Sbjct: 303 VTFLEKEGLKDKISVIASGGLLTPGHYLKALALGADAVYIGTIAVMAMVSSQ 354 >gi|31793062|ref|NP_855555.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium bovis AF2122/97] gi|121637775|ref|YP_977998.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|219557820|ref|ZP_03536896.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis T17] gi|224990259|ref|YP_002644946.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|260200956|ref|ZP_05768447.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis T46] gi|260205155|ref|ZP_05772646.1| putative L-lactate dehydrogenase [Mycobacterium tuberculosis K85] gi|289443349|ref|ZP_06433093.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T46] gi|289569949|ref|ZP_06450176.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T17] gi|289574554|ref|ZP_06454781.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis K85] gi|31618653|emb|CAD94606.1| POSSIBLE L-LACTATE DEHYDROGENASE (CYTOCHROME) LLDD2 [Mycobacterium bovis AF2122/97] gi|121493422|emb|CAL71895.1| Possible L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773372|dbj|BAH26178.1| putative L-lactate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416268|gb|EFD13508.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T46] gi|289538985|gb|EFD43563.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis K85] gi|289543703|gb|EFD47351.1| L-lactate dehydrogenase lldD2 [Mycobacterium tuberculosis T17] Length = 414 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|167725142|ref|ZP_02408378.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei DM98] Length = 380 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 103/363 (28%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISNL 123 I A AA V M++ S + + F+L R + + ++ Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRTFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGV---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 +G ++ GG + + +L + + Sbjct: 266 DAGADAIVVSNHGGRQLDGA------------------MSSVEALPAIVEAAGKRVEVWL 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 308 DGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCT 367 Query: 323 RVQ 325 ++ Sbjct: 368 DIR 370 >gi|215430777|ref|ZP_03428696.1| putative L-lactate dehydrogenase (cytochrome) lldD2 [Mycobacterium tuberculosis EAS054] gi|289753966|ref|ZP_06513344.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis EAS054] gi|289694553|gb|EFD61982.1| L-lactate dehydrogenase LldD2 [Mycobacterium tuberculosis EAS054] Length = 414 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + S L++K + + D + G+ ++ GG R L Sbjct: 261 DDLAWIKSQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 HV-----------------ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L+ I +M LLG ++EL Sbjct: 361 GLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEEL 396 >gi|126727208|ref|ZP_01743044.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] gi|126703417|gb|EBA02514.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] Length = 381 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 45/372 (12%), Positives = 106/372 (28%), Gaps = 78/372 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMI 72 ++ G+ N++ D + L + +G+ P I+ M+G Sbjct: 35 RELGLKVNREALDAIGFMPSVL--CGRTRANLQTTLMGQTYDLPFGIAPVGMSGLMWAGA 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNLG 124 E R LA AA + ++ S ++ + + + ++ + Sbjct: 93 E---RMLAQAAVAHNIPFSLSSVAVASPEDVAPHIGNNGWFQHYPVNSADLRRKMLPRIK 149 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNP----------------------------- 155 A + + L + P Sbjct: 150 AAGFHTLIITVDVPEESRRERQRRANLTVPPKTDLRTLTAMALRPAWCLAQLREGTVPRM 209 Query: 156 --LQEIIQPNGNTNF-------ADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + G +F + + L D L++K V L D + Sbjct: 210 RFFDDYVPTKGRESFTHAGALIRGIPDWQYLRDLRQEWDGKLIVKGV---LRPTDAKRIA 266 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G+ ++ G + + + I ++ I Sbjct: 267 SEGVDCIWVSNHSGRQFEAGPAVIEQLPKIRE-----------------AVGSDLPLIYD 309 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+ G+D+++++ GA + F A + + + L+ + +M LG + Sbjct: 310 SGVVWGLDVMRALAKGADYVMVGRAFQYAVAAFGARGIDHLVHILKSDITANMSQLGVED 369 Query: 324 VQELYLNTALIR 335 + +L + L++ Sbjct: 370 INQL--SDYLLK 379 >gi|88602074|ref|YP_502252.1| glutamate synthase (NADPH) [Methanospirillum hungatei JF-1] gi|88187536|gb|ABD40533.1| glutamate synthase (NADPH) GltB2 subunit [Methanospirillum hungatei JF-1] Length = 503 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 109/344 (31%), Gaps = 62/344 (18%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 ++ E + KL P++I M+ G + + +A A M G + + Sbjct: 154 DISLVTELVPNLKLETPIMIGHMSYGAISLNAH--KAMAKAVSDIGTFMGTGEGGLHEAL 211 Query: 102 HNAIKSFELRQYAPHTVLISNL----GAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLN 154 + ++ + + N A+++ G + H + AD + Sbjct: 212 YPYQDHMIVQVASGRFGVDVNYLERGAAIEIKIGQGAKPGIGGHLPGEKVCADVSCTRMI 271 Query: 155 P-LQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + I P + + + L+ S P+ +K + +SG Sbjct: 272 PEGSDAISPAPHHDIYSIEDLKQLVISLKEATEWKKPVFVKIAAVHNVAAIAAGIARSGA 331 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFI 262 I G G + + RD GIP ++ + NE I Sbjct: 332 DAVVIDGFRGGTGAAPSVFRDH----------VGIPIEAAVAAVDTKLRRQGIRNEVSII 381 Query: 263 ASGGLRNGVDILKSIILGASLG-------------------------GLA--SPFLKPAM 295 ASGG+R D+ K+I LGA G+A P L + Sbjct: 382 ASGGIRQSADVAKAICLGADAVYIGTAALVAMGCRVCGTCYRGLCTWGIATQRPDLVARL 441 Query: 296 DSSDA---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 D +A V IE+ E M G ++ L N +R Sbjct: 442 DPEEASHNVKNLIEAWTLELAELMGAAGINSIESLRGNRDRLRG 485 >gi|163741589|ref|ZP_02148980.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] gi|161385323|gb|EDQ09701.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Phaeobacter gallaeciensis 2.10] Length = 401 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 101/365 (27%), Gaps = 81/365 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTGGNNKMIE 73 + RN+ D L D S FLG P ++ M+G E Sbjct: 39 EATKARNRAALDQLGFAPSILHG--PQTPDLSRRFLGIDRPLPFGVAPVGMSGLIWPDAE 96 Query: 74 RINRNLAIAAEKTKVAMA---VGSQRVM----------------FSDHNAIKSFELRQYA 114 R+ LA A + V SQ D + + R A Sbjct: 97 RL---LARCAAAQGLPYCLSTVASQSPEDLAGDLGAAPWFQLYPPKDPDMRRDLLARAKA 153 Query: 115 P---------HTVLISN------LGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNP 155 + S G Q A A+ A G+ H+ Sbjct: 154 AGFAGLVLTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVAMRPAWAMGMARRGLPHMRT 213 Query: 156 LQEIIQPNG------------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + D + L D PL++K V + + D Sbjct: 214 LDKYVTGQSGSLSSTAHVGYLLRTSPDWDY-VKWLRDHWDGPLIIKGV---MRAEDAAPL 269 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 G ++ G + T +L R I Sbjct: 270 EAIGADALWVSNHAGRQFDAAP------------------STIEALSGIRAA-TRLPLIF 310 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+ +G+DIL+++ LGA L F A S ++ LRK+ +M LG + Sbjct: 311 DSGIESGLDILRALALGADYVMLGRAFHFALAALGSRGPDHLVDILRKDLDANMGQLGLE 370 Query: 323 RVQEL 327 + L Sbjct: 371 TLSAL 375 >gi|73668208|ref|YP_304223.1| glutamate synthase (NADPH) GltB2 subunit [Methanosarcina barkeri str. Fusaro] gi|72395370|gb|AAZ69643.1| glutamate synthase (NADPH) GltB2 subunit [Methanosarcina barkeri str. Fusaro] Length = 503 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 108/346 (31%), Gaps = 66/346 (19%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +V+ + KL+ P++I M+ G + ++ ++A A + M G + Sbjct: 154 DVELETKLAPNLKLNTPIMIGHMSFGAISLNAQL--SMAKAVTELGTYMGTGEGGLHRDL 211 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN------- 154 + ++ + + N+ ++ ++ A +G +N Sbjct: 212 YPYQDHMVVQVASGRFGV--NIDYLERGAAIEIKIGQGAKPGIGGHLPGEKVNEEVSRTR 269 Query: 155 ---PLQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKS 206 + I P + + + + L+ S P+ +K + +S Sbjct: 270 MIPVGSDAISPAPHHDIYSIEDLVQLIRSLKEATEWKKPVFVKIAAVHNVAPIAAGIARS 329 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQ 260 I G G + + + RD + GIP +++ + NE Sbjct: 330 SADAVVIDGFRGGTGAAPKVFRD----------NVGIPIEVAIASVDQKLREQGVRNEIS 379 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------------------------- 294 IASGG+R+ D+ KSI LGA + + L Sbjct: 380 IIASGGIRSSADLAKSIALGADAVNIGTAALVALGCRVCGNCYRNLCPWGIATQRPELVS 439 Query: 295 ----MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I+ E M G ++ L N +R Sbjct: 440 RLDPERGAVQVSNLIKGWTYELSELMGAAGINSIESLRGNRDRLRG 485 >gi|126728957|ref|ZP_01744772.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Sagittula stellata E-37] gi|126710887|gb|EBA09938.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Sagittula stellata E-37] Length = 402 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 24/170 (14%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D + + D PL++K V + + D +G+ ++ GG + Sbjct: 248 RTAPDWDY-VTWIRDHWDGPLVVKGV---MRASDAARLEAAGVDAIWVSNHGGRQFDAAP 303 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + L R IA G +G+D+L+ I LGA Sbjct: 304 AV------------------AEVLPEVRAATT-LPVIADSGFDSGLDMLRGIALGADFIM 344 Query: 286 LASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + D E LR++ + ++ LG R +L T + Sbjct: 345 MGRAWHYAVCALGEDGPAHLTEMLRRDLVAAIGQLGVARPTDLRGRTETL 394 >gi|111026347|ref|YP_708630.1| L-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] gi|110825190|gb|ABH00472.1| probable L-lactate dehydrogenase (cytochrome) [Rhodococcus jostii RHA1] Length = 426 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + P+ +K + L + D +G+ ++ GG S Sbjct: 270 WDDVAWVRDNWSGPMAIKGI---LRADDALRATDAGLDGVIVSNHGGRQLDHASSAVSAL 326 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + GG+R G+D+L ++ LGA + PF+ Sbjct: 327 PAI-----------------VDAVGDRVDVLLDGGIRRGIDVLTALALGAKACLVGRPFI 369 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 V A+E L E ++ L G V++L + Sbjct: 370 FGLGAGGRGGVTRALEILTTELHQAVTLAGAPSVRDLDRS 409 >gi|327184071|gb|AEA32518.1| glycolate oxidase [Lactobacillus amylovorus GRL 1118] Length = 347 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 110/328 (33%), Gaps = 40/328 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D N+ F D+ + R I E D + LG+K + PL+ + Sbjct: 54 ADDANVHNRVFLDNILVEMRV---IDSVEPDLTTTILGRKYASPLM--------PAAVSH 102 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNYDFG 133 +N+ L+ K A+ ++ + + +++ E + + ++ Sbjct: 103 LNKVLSDKTRKPMQEKAMAARNMDLLNWIGMETNEEYGEIVSQGGDTIRIIKPFADHHKI 162 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE----IIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + + A GA + + ++ + +G + + + + +P + K Sbjct: 163 LDEIKFA-EDHGAVAVGIDIDHIAGKNGKYDVVDGIPLGSITMDDLKHYAESTKLPFIAK 221 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + LS D ++G + ++ G + + DI G+ Sbjct: 222 GI---LSVSDALKARQAGCKAIVVSHHHGRVPFGVP-PLAVLPDIKKALAGSGM------ 271 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 + A G L G D K++ +GA + L + + AV ++ + Sbjct: 272 ----------EIYADGSLMTGYDAYKALAMGADAVLIGRGILSELLQSGTKAVEDKLKQM 321 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ M G K + + +++ + Sbjct: 322 NEQLAEMMMYTGVKDTKSF--DPSVLHY 347 >gi|20093988|ref|NP_613835.1| glutamate synthase subunit 2 [Methanopyrus kandleri AV19] gi|19886953|gb|AAM01765.1| Glutamate synthase subunit 2 [Methanopyrus kandleri AV19] Length = 429 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 124/389 (31%), Gaps = 74/389 (19%) Query: 4 DRKIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVD-------PSVEFLGK--- 53 RK + + G R FDD ++ ++S +D + Sbjct: 32 QRKAETGEYAVRGFGTSRKVPHFDDLVILP---AQVSRPPIDKYREPCNTKTVLGDRFAE 88 Query: 54 ---KLSFPLLISSMTGG--NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 KL P+L+ +M+ G + + I R A+ T I + Sbjct: 89 KPLKLDTPVLVGAMSFGALSKEAKVAIARGTAMVGTATNTGEGGMLPEEREEAKWLIAQY 148 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQEIIQPNG 164 ++ ++ A+++ G + H + + + P + + P Sbjct: 149 ASGRFGVSAEYLNAADAIEIKIGQGAKPGMGGHLMGEKVTKEIAEIRGIPKGSDALSPAR 208 Query: 165 NTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + +P+++K G D+++ K+G I G G Sbjct: 209 HMDIVGPEDLKMKIEQLREITDWKIPIIVKYSP-GRVKEDVKIAAKAGADIIAIDGMQGG 267 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDI 273 + + E I ++ GIPT +L A NE I SGG+R+G D+ Sbjct: 268 TGASPE----------IATENAGIPTIAALVQAVEALNEIGMRDEVDIIISGGIRDGADV 317 Query: 274 LKSIILGASLGGLASPFLKP------------------------------AMDSSDAVVA 303 K++ LGA + + L ++++ V Sbjct: 318 AKALALGADAVYVCTSVLIAMGCTACAQCHSGRCPVGICTQDPELRKKLDVDEAAERVAN 377 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTA 332 ++ + +E + L G V L Sbjct: 378 YLKVVTEECKMLAQLAGKTDVHNLEKEDL 406 >gi|84686644|ref|ZP_01014536.1| FMN-dependent dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84665318|gb|EAQ11796.1| FMN-dependent dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 145 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 18/144 (12%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + + + D + G ++ GG + ++ S+I V Sbjct: 2 IKGIMCAEDAMAAQREGADGVVVSNHGGRQLDGAPATIEILSEIVSVLDQ---------- 51 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLR 309 + GG+R G DI+K++ LGA L L A V +A+ L Sbjct: 52 -------HMTVLLDGGVRRGSDIVKALALGADAVLLGRAPLYGLAARGRAGVSSALSILE 104 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 E +M G V +L + Sbjct: 105 DEMRRTMIFTGCHGVSDLSEAGVV 128 >gi|23098152|ref|NP_691618.1| glutamate synthase [NADPH] large alpha subunit [Oceanobacillus iheyensis HTE831] gi|22776377|dbj|BAC12653.1| glutamate synthase (NADPH) large (alpha) subunit [Oceanobacillus iheyensis HTE831] Length = 482 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 123/370 (33%), Gaps = 79/370 (21%) Query: 26 FDDWHLIHRALPEISFD---EVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 F+ I + D VD SV K +++ P +IS M G + + + Sbjct: 89 FESITFIPAQAAKFPTDHDVSVDISVTIGPKAKKPLEINAPFMISGMAYGI-ALSKNVRL 147 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL----------RQYAPHTVLI------- 120 L AA +A+ G ++ + + ++ L + +I Sbjct: 148 ALMDAANNVGIAINSGEGGILDEEIDGADNYILQFGKARWSKEEELFKKAEMIELKFGQG 207 Query: 121 SNLGAVQLNYDFGVQ-KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 + LG + +Q A + + + + +H N + + DL ++ +S Sbjct: 208 AILGMGDIIIPRDLQGHARKVMGLEDDEDAVIHNNF----FENQTMKDLKDLVEELRHIS 263 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 VP+ K G DI+ L+ G+ Y + G ++ ++ Sbjct: 264 G--GVPIGAKVGAGGKIEDDIDALLEIGVDYIAVDGGQAATYGAAP----------LLTD 311 Query: 240 DWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 D+GIPT +L NE I SGG+ + LK++ LGA L S L Sbjct: 312 DFGIPTLHALIRAVNHLEKINKKNEISLIISGGMFTPGEYLKALALGADAVYLGSVMLFT 371 Query: 294 A------------------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 + + ++S +E V++ +G + Sbjct: 372 VAHKQVLDAVPFEPPTQVVWSDGKYRDKFVREEGAKNATNFLKSTIEELEVAIRAMGKTK 431 Query: 324 VQELYLNTAL 333 + E+ + Sbjct: 432 LSEVTKEDLV 441 >gi|317056714|ref|YP_004105181.1| ferredoxin-dependent glutamate synthase [Ruminococcus albus 7] gi|315448983|gb|ADU22547.1| ferredoxin-dependent glutamate synthase [Ruminococcus albus 7] Length = 301 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 94/293 (32%), Gaps = 33/293 (11%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERIN--RNLAIAAEKTKVAMAVGSQ-RVMFSD 101 D S+ FLG++ S P+ + + + N + +IAA++ V VG MF Sbjct: 33 DISMTFLGERFSMPIFMPAFSHLGNMGGRELTGLEEYSIAAKEMNVLNFVGMMENDMFER 92 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + +R P+ ++ D G + H+ + Sbjct: 93 IIRTGAKTVRIVKPYADNAKVRDQLKFAEDCGAFAVGMDID---------HIFGEKGYDI 143 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 G A S I A +P ++K V LS D G + ++ G Sbjct: 144 CVGEEMAAQTSDMIRSYIEASGLPFVIKGV---LSVEDAVKCADLGAKAIIVSHHHGRLP 200 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + DI + G + I G+ +G D+ KS+ LGA Sbjct: 201 YAVPPM-MMLPDIKKALEGRG----------------VEIIVDCGIESGADVYKSLALGA 243 Query: 282 SLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + D V+ S+ E M G +++ + + Sbjct: 244 DAAAIGRAMMPSLGKDGVQGVIDLFTSIGDELRYVMSFTGFADTEKIDSSALI 296 >gi|167772510|ref|ZP_02444563.1| hypothetical protein ANACOL_03888 [Anaerotruncus colihominis DSM 17241] gi|167665613|gb|EDS09743.1| hypothetical protein ANACOL_03888 [Anaerotruncus colihominis DSM 17241] Length = 462 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 117/364 (32%), Gaps = 71/364 (19%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERIN 76 +DD ++ L + DE VD + L P+ +S M+ G ++ Sbjct: 98 AWDDILILGAQLDPMPLDEHAPVDTTTVIGPSARRPLVLENPVYVSHMSFGALSKEAKV- 156 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--------------ELRQYAPHTVLISN 122 +LA A AM G ++ + A + + L+ + I Sbjct: 157 -SLARGAAMAGSAMCSGEGGILPEERQAAEKYIFEYVANRYSVTPENLKSADAIEIKIGQ 215 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 + +K Q + + + + + +L ++ S Sbjct: 216 GTKPGMGGHLPGEKVTQEISRIRNKPMGEDVIAPSRFPGVESKEDLRELIDQLRFASE-- 273 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P+ +K + G D+ + + + I GRGG + S + RD S Sbjct: 274 GRPIGVK-IAAGRIERDLAFCVYANPDFITIDGRGGATGSSPKLIRDATS---------- 322 Query: 243 IPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLAS---------- 288 +PT +L AR Y + + I +GGLR D K+I +GA +AS Sbjct: 323 VPTIYALYRARKYLDSIHSDISLIITGGLRVSSDFAKAIAMGADAVAVASGALIAMACQQ 382 Query: 289 -----------------PFLKPAMDSSDA---VVAAIESLRKEFIVSMFLLGTKRVQELY 328 P L+ + A V + +E + G +R+ +L Sbjct: 383 YRICGTGMCPVGVATQDPALRARLQGDAAALRVANYLRVSLEELKTFARITGHERLHDLS 442 Query: 329 LNTA 332 Sbjct: 443 TEDL 446 >gi|168703527|ref|ZP_02735804.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Gemmata obscuriglobus UQM 2246] Length = 385 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 107/368 (29%), Gaps = 75/368 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D + +N L L + E G + P I+ + Sbjct: 35 CNEDVNLLKNTDDLRQVELKPYYL--TRHEAPVLKTELFGHEYDAPFGIAPIGLQGLIWP 92 Query: 73 ERINRNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIKSFELRQY 113 LA AA + V + + Q +D+ R Sbjct: 93 GSP-EILARAATEHNVPFILSTVTTASIERIGEITGGRFWYQLYHPADNAIRDDILNRAE 151 Query: 114 A---PHTVLISNL-----------GAVQLNYDFGVQKAHQAVHVLG-ADGLFLHLNPLQE 158 A VL+ ++ + + ++ Q V A LH P Sbjct: 152 AAGCKTLVLLCDVPTFGYRPRDIRNGLAMPPRMTLRNILQIVGRPNWAVRTLLHGKPHFA 211 Query: 159 II---QPNG----------NTNFADLSS--KIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + P G N F+ + KIA + L+LK V S D E Sbjct: 212 TMAKYMPKGLNMKQLGAYMNATFSGRLNEAKIAPIRDRWKGNLVLKGVA---SEEDTETA 268 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFI 262 ++ G+ ++ GG G T SL +A Y ++ + + Sbjct: 269 VRLGLDGIIVSNHGGRQVDA------------------GESTIRSLLPIAAKYRSKLRVM 310 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GLR G DI +++ A L F+ A + AI L+ + M + Sbjct: 311 IDSGLRTGPDIARALACDADFTFLGRTFMYAVAALGREGGQHAIAMLKVQLKQVMDQVCC 370 Query: 322 KRVQELYL 329 RV + Sbjct: 371 HRVADFRR 378 >gi|110635374|ref|YP_675582.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Mesorhizobium sp. BNC1] gi|110286358|gb|ABG64417.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Chelativorans sp. BNC1] Length = 374 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 23/151 (15%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L L++K + ++ D + G+ ++ GG + Sbjct: 241 WTLLAQLRERWQGRLVVKGI---MAPEDAMRAREEGVDAVIVSNHGGRQLDSAPA----- 292 Query: 232 SDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 T +L+ R + GG+R G DILKS+ GA L PF Sbjct: 293 -------------TLHALKQIREAVGPDYSLAVDGGIRTGEDILKSLFAGADFTFLGRPF 339 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 L A ++ + LR E + +M +G Sbjct: 340 LYAVAARGTNGANDLFDMLRAELVNAMAQVG 370 >gi|159036163|ref|YP_001535416.1| (S)-2-hydroxy-acid oxidase [Salinispora arenicola CNS-205] gi|157914998|gb|ABV96425.1| (S)-2-hydroxy-acid oxidase [Salinispora arenicola CNS-205] Length = 382 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 109/348 (31%), Gaps = 71/348 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N+ F L+ R L + DP LG ++ P+ I+ + + + Sbjct: 49 AGEERTVRANRDAFRRLTLLPRVL--VDVAARDPRTTVLGTGVAAPVGIAP---TSYQSL 103 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP--HTVLISNLGAVQLNY 130 + LA A A GS R + + S L A L L ++ + Sbjct: 104 AHPDGELATAR-------AAGS-RGLLDVVSVFSSVSLEDVAEVATGPLWFQLYCLR-DR 154 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNF--------------------- 168 + +A G L L ++ P+ + F Sbjct: 155 GVTRELVQRAA-AAGYRALVLGVDLPVIGYRDRDIRNRFQLPPSVAPVNLPTRVAPGGSV 213 Query: 169 -----------ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 A + + +P+++K + +++ D + + G ++ G Sbjct: 214 LVELNRALVDPALTWRDVEWIREISPLPVVVKGI---VAADDADRAARIGADAVLVSNHG 270 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D+ + + G+R G D+L ++ Sbjct: 271 GRQLDGAPASITALPDV-----------------VSVVADRCEVYLDSGVRRGTDVLAAV 313 Query: 278 ILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GA + + P A +D V AA++ E ++M + G V Sbjct: 314 ARGARMAFVGRPVMWGLAAGGADGVRAALDLYLTELDLAMAVCGCPDV 361 >gi|296164874|ref|ZP_06847430.1| L-lactate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899716|gb|EFG79166.1| L-lactate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 411 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + + L++K + + D + G+ ++ GG R L Sbjct: 261 DDLEWIKAQWPGKLVVKGIQ---TLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 SV-----------------AREVGKHTEILLDTGIMSGADIVAAIALGARCTLVGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AI+ L++ + +M LLG ++EL Sbjct: 361 GLMAGGEAGVARAIDILQQGVLRTMRLLGVTCLEEL 396 >gi|240170510|ref|ZP_04749169.1| putative L-lactate dehydrogenase [Mycobacterium kansasii ATCC 12478] Length = 413 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + + L++K + + D ++ G+ ++ GG R L Sbjct: 261 EDLAWIKAQWPGKLVVKGIQ---TLDDARAVVECGVDGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + AR + + G+ +G DI+ +I LGA + +L Sbjct: 318 SV-----------------ARELGKHTEILMDTGIMSGADIVAAIALGARCTLVGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L I +M LLG + EL Sbjct: 361 GLMAGGEAGVARAIEILGSGVIRTMRLLGVTSLAEL 396 >gi|254184476|ref|ZP_04891065.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1655] gi|184215068|gb|EDU12049.1| putative L-lactate dehydrogenase [Burkholderia pseudomallei 1655] Length = 380 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 97/363 (26%), Gaps = 79/363 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + + ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAEQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNL-- 123 I A AA V + + + + +R A LI Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGV---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 +G ++ GG + + +L + + Sbjct: 266 DAGADAIVVSNHGGRQLDGA------------------MSSVEALPAIVEAAGKRVEVWL 307 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 308 DGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCT 367 Query: 323 RVQ 325 ++ Sbjct: 368 DIR 370 >gi|167908029|ref|ZP_02495234.1| L-lactate dehydrogenase [Burkholderia pseudomallei NCTC 13177] Length = 380 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 96/362 (26%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQR--------VMFSDHNAIKSFELRQYAPHTVLISNL-- 123 I A AA V + + + + +R A LI Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K + L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGM---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + I + Sbjct: 266 DAGADAIVVSNHGGRQLDGAMSSIEALPAI-----------------VEAAGKRVEVWLD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 309 GGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCTD 368 Query: 324 VQ 325 ++ Sbjct: 369 IR 370 >gi|325957348|ref|YP_004292760.1| glycolate oxidase [Lactobacillus acidophilus 30SC] gi|325333913|gb|ADZ07821.1| glycolate oxidase [Lactobacillus acidophilus 30SC] Length = 347 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 110/328 (33%), Gaps = 40/328 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D N+ F D+ + R I E D + LG+K + PL+ + Sbjct: 54 ADDANVHNRVFLDNILVEMRV---IDSVESDLTTTILGRKYASPLM--------PAAVSH 102 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNYDFG 133 +N+ L+ K A+ ++ + + +++ E + + ++ Sbjct: 103 LNKVLSDKTRKPMQEKAMAARNMDLLNWIGMETNEEYGEIVSQGGDTIRIIKPFADHHKI 162 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE----IIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + + A GA + + ++ + +G + + + + +P + K Sbjct: 163 LDEIKFA-EDHGAVAVGIDIDHIAGKNGKYDVVDGIPLGSITMDDLKHYAESTKLPFIAK 221 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V LS D ++G + ++ G + + DI G+ Sbjct: 222 GV---LSVSDALKAHQAGCKAIVVSHHHGRVPFGVP-PLAVLPDIKKALAGSGM------ 271 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 + A G L G D K++ +GA + L + + AV ++ + Sbjct: 272 ----------EIYADGSLMTGYDAYKALAMGADAVLIGRGILSELLQSGTKAVEDKLKQM 321 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ M G K + + +++ + Sbjct: 322 NEQLAEMMMYTGVKDTKSF--DPSVLHY 347 >gi|296444453|ref|ZP_06886418.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylosinus trichosporium OB3b] gi|296258100|gb|EFH05162.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Methylosinus trichosporium OB3b] Length = 376 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 24/163 (14%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I + P++LK + L D + G ++ GG Sbjct: 233 GWRD-IEWVREFWPGPMILKGI---LDVEDARDAARFGADGIVVSNHGGRQLDGA----- 283 Query: 230 LESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLG-GLA 287 + T +L +A + +A G+R+G+D+L+ + LGA Sbjct: 284 -------------LSTAKALPPIADAVGDALTVLADSGVRSGLDVLRMLALGAKGVMLGR 330 Query: 288 SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A V ++ L KE +M L G + + + Sbjct: 331 AAAFALAAGGRGGVETMLDLLAKELRTAMVLTGAPSIAAVDRS 373 >gi|194307290|gb|ACF42140.1| L-lactate dehydrogenase [Mycobacterium lepromatosis] Length = 400 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + + ++K + + D ++ G ++ GG R L Sbjct: 247 DDLAWIKAQWPGKFVVKGIQ---TLDDARAVVERGADGIVLSNHGGRQLDRAPVPFHL-- 301 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +PT AR + + + G+ +G DI+ +I LGA + +L Sbjct: 302 ----------LPTV-----ARELGKDTEILLDTGIMSGADIVAAIALGARCTLVGRAYLY 346 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L I +M LLG ++EL Sbjct: 347 GLMAGGEAGVRRAIEILDNGVIRTMRLLGVTCLEEL 382 >gi|72078739|ref|XP_795945.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115703415|ref|XP_001202095.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 350 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 90/313 (28%), Gaps = 58/313 (18%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT---------GGNNKMIERI 75 F + + R L + + LG+ + +P+ IS Sbjct: 41 AFSRYRIRSRVLQ--DVSKRSLATSVLGQSIPYPICISPTACHFFAHPDGEEATAKAAEA 98 Query: 76 NRNLAIAAEKTKVAM------AVGSQR---VMFSDHNAIKSFELRQYAP----------H 116 L + + +M A G R + + + +R+ Sbjct: 99 AGALMVLSCDAGSSMEDVTMAAPGGLRWMGIYPFTDRQLTEYTIRKAEKLGFKALVVTVD 158 Query: 117 TVLISNLGAVQ--LNYDFGVQKAHQAVHVLGAD------GLFLHLNPLQEIIQPNGNTNF 168 + ++ +GAV D + + V AD + E ++ N Sbjct: 159 SPVLGIVGAVAELFEQDHVLNHPSYRMPVYEADIPSARAAKQESIKNHFEYLR-EMQYNP 217 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 I + +P++ K + L++ +G+ ++ GG + Sbjct: 218 KATWEYIRWIKKVTSLPVVCKGI---LTAESASDAANAGVDGILVSAHGGRQQESSPAPI 274 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D +++ G + GG+R G D+ K++ GA L Sbjct: 275 DALAEVVEAVHGRG----------------VEVYMDGGVRTGTDVFKALGRGARAVFLGR 318 Query: 289 PFLKPAMDSSDAV 301 P L + + Sbjct: 319 PILWGLAWNGQRL 331 >gi|126732510|ref|ZP_01748308.1| L-lactate dehydrogenase [Sagittula stellata E-37] gi|126706956|gb|EBA06024.1| L-lactate dehydrogenase [Sagittula stellata E-37] Length = 391 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 102/362 (28%), Gaps = 72/362 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPL------LISSMTG 66 + + RN F++ L+ R + + +D E G+ P ++++ Sbjct: 36 AESERNMRRNCTAFEEVELVPRYM--VDVSSIDTRTELFGQTYDAPFGMAPIGMLNAFWP 93 Query: 67 GNN----KMIERIN-------------RNLAIAAEKTKVAM----AVGSQRVMFSDHNAI 105 G + ++ +R N LA AA+ + Sbjct: 94 GADLSLARLCKRQNLPYVASSAASTTLEALAEAADGNGWFQLYVSGDDTVTEGLVARAEA 153 Query: 106 KSFELRQYAPHTVLIS-------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--- 155 +++ N AV V A + LF H P Sbjct: 154 AGYDVMIVTADVPAAGKRDRDIRNRLAVPFRITPEVALGLMAHPRWSLETLF-HGKPNIA 212 Query: 156 -----LQEI-----IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 LQ +Q T + + L LL+K + L D + Sbjct: 213 NYADLLQSATSYADVQKTLITPAFNW-EALKRLRDRWGGKLLVKGI---LHPDDAARCTE 268 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G ++ GG + + D+ I + I Sbjct: 269 AGCDGIVVSNHGGRQVAFGPATADVLPAIAE-----------------AVAGRMKVIVDS 311 Query: 266 GLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++++ LGA + A+E L E + ++ LG R Sbjct: 312 GIRRGADMMRAKALGADFTLTGRALAFGVGAGGAPGAARAVEILELELVRALGQLGVPRF 371 Query: 325 QE 326 + Sbjct: 372 AD 373 >gi|118618394|ref|YP_906726.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium ulcerans Agy99] gi|118570504|gb|ABL05255.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium ulcerans Agy99] Length = 414 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + + L++K + + D ++ G ++ GG R + L Sbjct: 261 DDLEWMKAQWPGKLVVKGIQ---TLDDARAVVERGADGIVLSNHGGRQLDRAPAPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +AR + + + G+ +G DI+ +I LGA + +L Sbjct: 318 -----------------LVARELGKDTEIVVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L +M LLG ++EL Sbjct: 361 GLMAGGEAGVKRAIEILSAGVSRTMRLLGVTCLEEL 396 >gi|238595618|ref|XP_002393819.1| hypothetical protein MPER_06388 [Moniliophthora perniciosa FA553] gi|215461871|gb|EEB94749.1| hypothetical protein MPER_06388 [Moniliophthora perniciosa FA553] Length = 288 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 26/163 (15%) Query: 169 ADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 A KI L P L+K + D + G + G Sbjct: 114 AHTWEKIPWLIKEWKRISDGRPFLIKGIQR---VQDAVKAYEVGCEGIVVTNHAGRQVDG 170 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 ++ +I + ++ I G+R G D+ K+I LGA Sbjct: 171 AVGSLEMLPEI-----------------VKAVGHKMTIIFDSGIRTGSDVFKAIALGAHA 213 Query: 284 GGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + A + +SL + ++M + G ++ Sbjct: 214 VMIGRLYVWGMAHEGEKGCRHVFKSLLADLDITMTVAGYASIK 256 >gi|89053894|ref|YP_509345.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] gi|88863443|gb|ABD54320.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] Length = 368 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 95/357 (26%), Gaps = 76/357 (21%) Query: 24 KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA 83 FD L R L ++S D G+ P IS M G N + LA A Sbjct: 39 AAFDTLELRPRILRDVSAR--DLGASVFGQATKAPFGISPM-GMCNLSGPGADMMLARLA 95 Query: 84 EKTKVAMAVGSQRVMFSDH-----------------NAIKSFELRQYAPHTVLISNLGAV 126 + V + V + + + +F+L + A G Sbjct: 96 AREGVPLGVSTVASTAMEPLIEEAEGNAWFQLYFTGDGSGTFKLVERAKSA------GYQ 149 Query: 127 QLNYDFGVQKAHQAVHVL-------------GADGLFLH----------LNPLQEIIQPN 163 L V + + L LH P Q Sbjct: 150 TLILTVDVPEVGRRPRELRHGFTMPFRIGPKQFLDFALHPRWSISSLLAGKPDMANFQME 209 Query: 164 GNTNFADLSSK------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 G S +A L L++K V L D L ++G+ ++ G Sbjct: 210 GFEFDRTASRAKADFGTLARLREMWPGKLVIKGV---LDPEDARLLKEAGVDAIQVSSHG 266 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 + I E GLR G D++K+ Sbjct: 267 ARQLESAPVPISVLPAIRD-----------------AVGPEFPLFFDTGLRGGEDVVKAY 309 Query: 278 ILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 GA+ L A + + L+ E +++ +G + L A+ Sbjct: 310 AQGANFTFLGRVLQFAIAAGGEEGLAQLWSVLKDETSITLAQIGATSLGHNQLADAI 366 >gi|167625211|ref|YP_001675505.1| ferredoxin-dependent glutamate synthase [Shewanella halifaxensis HAW-EB4] gi|167355233|gb|ABZ77846.1| ferredoxin-dependent glutamate synthase [Shewanella halifaxensis HAW-EB4] Length = 515 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 44/281 (15%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V+ S E +G KL+ PL +S M+ G+ +I LA AE + G Sbjct: 161 MEDVEVSTELIIGPQARKPLKLAIPLFVSDMSYGSLSEEAKI--ALARGAELVGTGICSG 218 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A S + A + L+S + + G + A + Sbjct: 219 -EGGMLDEEQAENSRYFYELASAEFGYNEALLSRVQSFHFKGGQGAKTGTGGHLPASKNV 277 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G L + I P + +F + ++ +S +P+ K + Sbjct: 278 GKIAEVRGLPEGTDAISPPTFKDLKSSADFKRFADRVREVSG--GIPIGFKLSANHIER- 334 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y +E Sbjct: 335 DIQFALDASADYIILDGRGGGTGAAPEIFRDHIS----------VPTIPALARARRYLDE 384 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +GG+R +D +K++ LGA +++ ++ Sbjct: 385 QGMSGLVTLIITGGIRTPIDFVKAMALGADGVAISNSAMQA 425 >gi|154151233|ref|YP_001404851.1| glutamate synthase (NADPH) [Candidatus Methanoregula boonei 6A8] gi|153999785|gb|ABS56208.1| Glutamate synthase (NADPH) [Methanoregula boonei 6A8] Length = 503 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 107/344 (31%), Gaps = 62/344 (18%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 + D KL P++I M+ G + + LA AA+K + G + S Sbjct: 154 DTDLLTTLAPNLKLETPIMIGHMSYGAISLNAQ--TALAKAAKKMGTFLGTGEGGLHESL 211 Query: 102 HNAIKSFELRQYAPHTVLISNL----GAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLN 154 + ++ + + N A+++ G + H + AD + Sbjct: 212 YPYQDHMIVQVASGRFGVDINYLERGAAIEIKIGQGAKPGIGGHLPGEKVCADVSCTRMI 271 Query: 155 P-LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + I P + + + L+ ++ P+ +K S+ +SG Sbjct: 272 PEGSDAISPAPHHDIYSIEDLKQLVHSLKEATEWKKPVFVKIAAVHNSAAIAAGIARSGA 331 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP---TPLSLEMA---RPYCNEAQFI 262 + G G + + RD GIP S++ + NE I Sbjct: 332 DAVVVDGFRGGTGAAPRVFRDH----------VGIPVEAAVASVDEKLRKQGIRNEVSII 381 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP------------------AMDSSD----- 299 ASGG+R DI K I LGA + + L A + Sbjct: 382 ASGGIRQSADIAKVICLGADAVYIGTSALVAMGCRVCGTCNRGVCAWGIATQRPELTKRL 441 Query: 300 -------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E M G ++ L N +R Sbjct: 442 DPETNAVQVANLIHAWTDEIAELMGAAGINSIESLRGNRDRLRG 485 >gi|239628216|ref|ZP_04671247.1| peroxisomal (S)-2-hydroxy-acid oxidase [Clostridiales bacterium 1_7_47_FAA] gi|239518362|gb|EEQ58228.1| peroxisomal (S)-2-hydroxy-acid oxidase [Clostridiales bacterium 1_7_47FAA] Length = 308 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 113/349 (32%), Gaps = 78/349 (22%) Query: 11 NIVCKDPGIDRNK---KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS---- 63 + ++P D N+ ++FD+ + R I D ++ GK S P+++++ Sbjct: 2 EHMLREPAKDSNEITREYFDEILVEMR---HIDAVTPDTTLNLYGKTFSTPIMMAALSHL 58 Query: 64 ------------MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 M G +M +N E+ A G+ + +S LR Sbjct: 59 KGMDGKGDGMVEMAQGA-RMAGTVNWAGMGTEEQFSAIAATGAPTIRIIKPYEDESLVLR 117 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + A LGA+ + D H A G ++ + P Sbjct: 118 KIAQ----AEELGALAVGMDLD--------HAFNARGRADNV-----LGHPMRPRT---- 156 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +I +P +LK + LS+ D L++G ++ G Sbjct: 157 LKEIESYCRRTKLPFILKGI---LSAADAGKCLEAGAGGIVVSHHHGI------------ 201 Query: 232 SDIGIVFQDWGIPTPLSLEMARP-----YCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 IPT + M P G+ NG D K++ LGA+ + Sbjct: 202 -----------IPTAAAPLMVLPEIADVINKRIPIFVDCGIMNGADAFKALALGATAVSV 250 Query: 287 ASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 P +K + + I + E M + V +++ +L+ Sbjct: 251 GRPVMKAISKSGAQGAADTIAEITAELAGMMARTCSPDVG--HIDPSLL 297 >gi|237509649|ref|ZP_04522364.1| L-lactate dehydrogenase (cytochrome) [Burkholderia pseudomallei MSHR346] gi|235001854|gb|EEP51278.1| L-lactate dehydrogenase (cytochrome) [Burkholderia pseudomallei MSHR346] Length = 380 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 101/362 (27%), Gaps = 77/362 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNKMIE 73 + N+ F L R + + G+ ++ P+ ++ TG G + Sbjct: 34 ESTYRANEADFRKIRLRQRV--GVDISNRNLRTTMAGQDVAMPVALAP-TGLVGMMRADG 90 Query: 74 RINRNLAIAAEKTKVA-----MAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISNL 123 I A AA V M++ S + + F+L R + + ++ Sbjct: 91 EILA--ARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRTFIERLIERASA 148 Query: 124 -GAVQLNYDFGVQKAHQAVHVLG-----------ADGLFLHLNPLQEIIQPNGNTNFAD- 170 G L +Q A Q + + L + P + Sbjct: 149 AGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGN 208 Query: 171 --------------------------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + L++K V L + D Sbjct: 209 IVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGV---LDADDALRAA 265 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G ++ GG S + I + Sbjct: 266 DAGADAIVVSNHGGRQLDGAMSSIEALPAI-----------------VEAAGKRVEVWLD 308 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G D+LK++ LGA + FL A A+E + +E +M L G Sbjct: 309 GGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCTD 368 Query: 324 VQ 325 ++ Sbjct: 369 IR 370 >gi|317054325|ref|YP_004118350.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] gi|316952320|gb|ADU71794.1| L-lactate dehydrogenase (cytochrome) [Pantoea sp. At-9b] Length = 385 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 26/167 (15%) Query: 166 TNFAD----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 +F+ I + +++K + LS D + GI ++ GG Sbjct: 231 RDFSGRSHLTWQHIQHIRHRWSGAMVIKGI---LSQRDAQRCKDIGIDGIVVSNHGG--- 284 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 R L++ I + L E + G+R G D +K++ LGA Sbjct: 285 ------RQLDTSIAPIHV---------LPEIVAAAGEMTVMLDSGIRRGTDAIKALALGA 329 Query: 282 SLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + PF A+ + V AI+ + E + +LG + +L Sbjct: 330 QACFVGRPFNYACAVGGAQGVHLAIDLITSEISRDLGMLGVAALDQL 376 >gi|170089905|ref|XP_001876175.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649435|gb|EDR13677.1| predicted protein [Laccaria bicolor S238N-H82] Length = 360 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 116/353 (32%), Gaps = 54/353 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ F + +I R L ++ G P+L++ + G Sbjct: 13 AGTNSTYRANQRAFQKFGIIPRML--VNATRRSLETTIFGVTHPSPILVAPI-GVQAIFA 69 Query: 73 ERINRNLAIAAEKTKVAMAVGSQR-------VMFSDHNAIKSFEL--RQYAPHTVLISN- 122 E N A AA K K+ + + + ++ + F+L + T+ + N Sbjct: 70 EEAELNPARAAGKLKIPFILSTAASRTIEEVAEANGPDSHRWFQLYWPRTNDVTLSLLNR 129 Query: 123 ---LGAVQLNYDFGVQKAH-QAVHVLGADGLFLHLNPLQ--------------------- 157 G L + + A F H +Q Sbjct: 130 AKASGYKALVVTLDTMGLGWRPHDLATAYMPFAHGVGIQVGKSDPVFMARYGKQPGVFFG 189 Query: 158 -EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 E ++ + + D + L + PL+LK + S D E L+ G+ ++ Sbjct: 190 REWLKEANSGLYRDWED-LRFLRDNWEGPLVLKGIQ---SVHDAEKALEYGVNGIIVSNH 245 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG I + T ++ A+ + G+R G DI K+ Sbjct: 246 GGRQVDGAIPSLYALETIM-------MSTK--IKEAQQ-SGTLTILFDSGIRTGSDIFKA 295 Query: 277 IILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELY 328 I LGA + P+L ++ A V ++ + ++ L G ++E+ Sbjct: 296 IALGAQAVLIGRPWLYGSIVGGQAGVEQVLKHTLADLDNTLGLAGYTCLREIQ 348 >gi|320333030|ref|YP_004169741.1| Lactate 2-monooxygenase [Deinococcus maricopensis DSM 21211] gi|319754319|gb|ADV66076.1| Lactate 2-monooxygenase [Deinococcus maricopensis DSM 21211] Length = 402 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 64/356 (17%) Query: 17 PGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN 76 + N F W ++ R L + +E D + G P+L++ + + I + Sbjct: 68 QAMQANLDAFRRWRIVPRML--RNVEERDLGITLFGHHYPAPMLLAPI---GVQSIVHPD 122 Query: 77 RNL--AIAAEKTKVAMAVGSQRVMFSDH------NAIKSFELRQYAPHTVLISNLGAV-- 126 L A AA + + + +H +A + F+L S + Sbjct: 123 GELGVARAAASAGLPLIFSTASSAPLEHLAAAMGDAPRWFQLYWSKSEGFNASIIRRAEA 182 Query: 127 -----------QLNYDFGVQKAHQA-VHVLGADGLFLHL-NPL--QEIIQPNGN------ 165 + + A + + G+ +L +P E+ P + Sbjct: 183 AGCHALVVTLDTFLLAWRPRDIENAYLPFIQGVGIANYLTDPAFNAELAAPARDHPQGAI 242 Query: 166 -------TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 TN A + L + +P+LLK + L D L G+ ++ GG Sbjct: 243 EHFLRVFTNPALNWDDLRWLRAQTKLPILLKGI---LHPDDARRALDFGMDGLVVSNHGG 299 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 + D + + G+R D++K+ Sbjct: 300 RQVEGAVASLDALPAV-----------------VDAVEGRVPVLLDSGVRRASDVIKARA 342 Query: 279 LGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA L P+L A+ V + ++ + +++ L G + EL T + Sbjct: 343 LGAQATLLGRPYLWGLALAGEAGVREVLANMLADLDLTLALSGHRTFDELTRATVV 398 >gi|15828105|ref|NP_302368.1| L-lactate dehydrogenase [Mycobacterium leprae TN] gi|221230582|ref|YP_002503998.1| L-lactate dehydrogenase [Mycobacterium leprae Br4923] gi|13093659|emb|CAC31001.1| L-lactate dehydrogenase [Mycobacterium leprae] gi|219933689|emb|CAR72143.1| L-lactate dehydrogenase [Mycobacterium leprae Br4923] Length = 414 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 +A + + ++K + + D ++ GI ++ GG R L Sbjct: 261 DDLAWIKTQWPGKFVVKGIQ---TLDDARAVVERGIDGVVLSNHGGRQLDRAPVPFHL-- 315 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +PT AR + + + + G+ +G DI+ +I LGA + +L Sbjct: 316 ----------LPTV-----AREFGKDTEILLDTGIMSGADIVAAIALGARCTLVGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L I +M LLG ++EL Sbjct: 361 GLMAGGEAGVRRAIEILESGVIRTMQLLGVTCLEEL 396 >gi|41407683|ref|NP_960519.1| LldD2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396036|gb|AAS03902.1| LldD2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 420 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + + L++K + + D + G ++ GG R L Sbjct: 261 DDLEWIKARWPGKLVVKGIQ---TLDDARAVVDRGADGIVLSNHGGRQLDRAPVPFHL-- 315 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + T AR + + G+ +G DI+ +I LGA + +L Sbjct: 316 ----------LSTV-----ARELGKHTEILLDTGIMSGADIVAAIALGARCTLVGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L + I +M LLG ++EL Sbjct: 361 GLMAGGEAGVTRAIEILAEGVIRTMRLLGVTCLEEL 396 >gi|302696141|ref|XP_003037749.1| hypothetical protein SCHCODRAFT_80154 [Schizophyllum commune H4-8] gi|300111446|gb|EFJ02847.1| hypothetical protein SCHCODRAFT_80154 [Schizophyllum commune H4-8] Length = 454 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 15/165 (9%) Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 F ++A + + PL+LK + ++ D ++ G ++ GG Sbjct: 289 FRTW-EELAFVRKHWEGPLMLKGI---MTLDDALKAMEVGCDGIIVSNHGGRQIDGCLPA 344 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 I T S + + G+R G DI+K++ +GA L Sbjct: 345 LMALEKI----------TGDSRIKEAQLAGKFTVLFDSGIRRGSDIVKAVAIGAQAVLLG 394 Query: 288 SPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 P++ A+ S+ V + L E +++ L G + +++ Sbjct: 395 RPYMYGLALAGSEGVEQVVRGLLCETEITLGLCGYTSIDQIWHKR 439 >gi|189196666|ref|XP_001934671.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980550|gb|EDU47176.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 437 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 113/372 (30%), Gaps = 86/372 (23%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL-A 80 N++ F +I R L + ++ D ++E G K+ P+ + + G NK+ L A Sbjct: 71 NRQSFYRHRIIPRML--VDTNQRDTAIEIFGHKVPAPIGFAPV--GINKIYNPEGELLVA 126 Query: 81 IAAEKTKVAMAV---GSQRVMFSDHNAIKSFELRQYAP---------HTVLISNL----- 123 AA + + GSQ D +R+ V L Sbjct: 127 RAAGTLGLPYCLSTAGSQS--IEDVGLANDQGVRKRIDGETAAGGGEKGVRFFQLYMPHD 184 Query: 124 -----GAVQLNYDFGVQKAH----------QAVHVLGADGLFLHL--------NP----- 155 +Q D G + V ++ F H +P Sbjct: 185 DELTHSILQRAVDSGFSACILTLDTWQLGWRHDDVANSNYAFYHGLGADLGLTDPVFQKR 244 Query: 156 LQE-IIQPNGNTNFAD--LSSKI-ALLSSAMDVPL----LLKEVGCGL--------SSMD 199 L+E I P N A + + D + L KE+ G S D Sbjct: 245 LKEKGIDPKTQPNEAGALWIDNVWHGRAHTWDKAVWAMKLWKELSGGKPFSLKGIQSVDD 304 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + + G ++ G + D I ++ Sbjct: 305 AKKAVDLGFDGIVVSNHAGRQVDGAVASLDALEKI-----------------VDAVGDKI 347 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 + G+R+ D++K++ LGA + ++ V + SL + + M + Sbjct: 348 YIMFDSGVRSASDVVKALALGAKFVFVGRLWIWGLSIMGETGVNHVMRSLLADLDILMNV 407 Query: 319 LGTKRVQELYLN 330 G + + E+ + Sbjct: 408 GGFRNIGEITRD 419 >gi|328675387|gb|AEB28062.1| L-lactate dehydrogenase [Francisella cf. novicida 3523] Length = 309 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 S + + D P+++K + + + D + +G ++ GG S + Sbjct: 164 WSDVEWVKKQWDGPMIIKGI---MDTEDAIMAQNTGADAIIVSNHGGRQLDGSPSSISVL 220 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I I T S + + + G+R G D+LK+ LGA G + + Sbjct: 221 EEI--------IDTVNS---------KLEVLIDSGIRCGQDLLKAKALGAKAGLIGRAMV 263 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M L G + Sbjct: 264 YGVGAYGEKGAQRVLEIFYQEMDKTMALCGHTDIN 298 >gi|302562327|ref|ZP_07314669.1| lactate 2-monooxygenase [Streptomyces griseoflavus Tu4000] gi|302479945|gb|EFL43038.1| lactate 2-monooxygenase [Streptomyces griseoflavus Tu4000] Length = 378 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 22/164 (13%) Query: 151 LHLNPLQEIIQPNGN-TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 +H +P ++ G + A +A L D P++LK V L D L +G+ Sbjct: 235 VHEDPNAAVMHFVGMFADPAKSWPDLAFLRENWDGPIVLKGV---LHPDDARLAADAGMD 291 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ GG + + D + + + G+R Sbjct: 292 GVVVSNHGGRQVAGAIAAADALPGV-----------------VEAVGDRLTVLFDSGVRT 334 Query: 270 GVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEF 312 G D+ K++ LGA L P++ ++ + V I L E Sbjct: 335 GDDVFKALALGARAVLLGRPYVYGLGLEGQEGVEHVIRCLLAEL 378 >gi|300743711|ref|ZP_07072731.1| L-lactate dehydrogenase [Rothia dentocariosa M567] gi|300380072|gb|EFJ76635.1| L-lactate dehydrogenase [Rothia dentocariosa M567] Length = 412 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 23/168 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + ++ +++K V + D + G+ ++ GG R L Sbjct: 260 EDLKIIREMWPGKIVIKGVQ---NLEDSKKLADLGVDGILLSNHGGRQLDRAPVPFHLLP 316 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ R N+ + + G+ NG DI+ S+ LGA + +L Sbjct: 317 EV-----------------VREVGNDVEVMVDTGIMNGADIVASMALGAKFTLIGRAYLY 359 Query: 293 PAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL--YLNTALIRHQ 337 M V IE L E +M LL + EL T L R Q Sbjct: 360 GLMAGGRRGVDRTIEILSDEVRRTMKLLQVHNIAELEPKHVTQLRRLQ 407 >gi|313902104|ref|ZP_07835515.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] gi|313467622|gb|EFR63125.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] Length = 477 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 109/303 (35%), Gaps = 48/303 (15%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINRNL 79 F+ L R LP +VD S + L+ PLL+S+M G + + + L Sbjct: 106 AFNPAQLARRPLPP--GAQVDTSAVLGPRAARPLHLATPLLVSAM-GYGIGVSKAVALAL 162 Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKS----FELRQYAPHTVLISNLGAVQLNYDFGVQ 135 A A + A GS V+ A + + ++ V++ G + Sbjct: 163 ARGAHQAGTAYNAGSGPVVPEILEAGGPVILQYTGGPWNQVPDQLARAAMVEIRLGHGAR 222 Query: 136 KA-----------HQAVHVLGADGLFLHLNPLQEIIQPN--GNTNFADLSSKIALLSSAM 182 A +A +GA G H + L E P F +L ++ S Sbjct: 223 GALGRLVRPDRLPEEARRRMGAAG---HKSLLLEAPLPETENLRTFRELVDRLRH--STG 277 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K V D+ L++G+ I G GGTS + I+ D+ Sbjct: 278 GAPVGIKLVATHHLEHDLLWVLEAGVDVIAIDGSEGGTSETPP-----------ILADDF 326 Query: 242 GIPT------PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 GIPT +L A +A GGLR + LK++ LGA L + + A Sbjct: 327 GIPTLYALVRAAALLEAAGVRQRVSLLAGGGLRTPGEFLKALALGADAVYLGTAVIMAAT 386 Query: 296 DSS 298 Sbjct: 387 HGQ 389 >gi|84516407|ref|ZP_01003766.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Loktanella vestfoldensis SKA53] gi|84509443|gb|EAQ05901.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Loktanella vestfoldensis SKA53] Length = 379 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 24/163 (14%) Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D L A D PL++K VG D G ++ G + Sbjct: 232 RTSPDWDY-FKALRDAWDGPLVVKGVGRA---DDAARLTDEGADAIWVSTHAGRQFD--- 284 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 G P + A I G+ G+D+L+++ LGA Sbjct: 285 ----------------GGPASIETLPAIRAATPLPVIFDSGIEGGLDVLRALALGADFVM 328 Query: 286 LASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L F A ++ LR++ I +M LG + +++L Sbjct: 329 LGRAFHYGLAAMGEAGAAHVLDILRQDMISNMGQLGARSLKDL 371 >gi|294816553|ref|ZP_06775195.1| Putative dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294321368|gb|EFG03503.1| Putative dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 408 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 26/165 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + LL S D+PL +K V + +G ++ GG + D Sbjct: 257 LELLRSWTDLPLAVKGVCRA---DEAVRLRDAGADALIVSNHGGRQLDSGPAALDCLP-- 311 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-P 293 +A ++ + G+R G D+L ++ LGAS + P+L Sbjct: 312 ---------------LVAEAVGDQIPVLFDSGVRTGTDVLIALALGASAVMIGRPWLYGL 356 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLG-----TKRVQELYLNTAL 333 A V + L EF ++ L G + +L L A+ Sbjct: 357 ATGGRAGVEHVLRCLETEFTGALTLTGHQRPDSLSPADLTLLPAI 401 >gi|254390946|ref|ZP_05006156.1| isopentenyl-diphosphate delta-isomerase II [Streptomyces clavuligerus ATCC 27064] gi|326445473|ref|ZP_08220207.1| putative dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197704643|gb|EDY50455.1| isopentenyl-diphosphate delta-isomerase II [Streptomyces clavuligerus ATCC 27064] Length = 403 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 26/165 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + LL S D+PL +K V + +G ++ GG + D Sbjct: 252 LELLRSWTDLPLAVKGVCRA---DEAVRLRDAGADALIVSNHGGRQLDSGPAALDCLP-- 306 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-P 293 +A ++ + G+R G D+L ++ LGAS + P+L Sbjct: 307 ---------------LVAEAVGDQIPVLFDSGVRTGTDVLIALALGASAVMIGRPWLYGL 351 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLG-----TKRVQELYLNTAL 333 A V + L EF ++ L G + +L L A+ Sbjct: 352 ATGGRAGVEHVLRCLETEFTGALTLTGHQRPDSLSPADLTLLPAI 396 >gi|326329216|ref|ZP_08195542.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] gi|325952951|gb|EGD44965.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Nocardioidaceae bacterium Broad-1] Length = 229 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 21/153 (13%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P +LK V D + +G+ ++ GG + + + I Sbjct: 88 GTPFVLKGVCR---VDDALRAVDAGVAGISVSNHGGNNLDGTPAAIRMVKPIAD------ 138 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK-PAMDSSDAV 301 ++ + GG+R G D++K++ LGA + +L A + V Sbjct: 139 -----------RVGDQVDVVMDGGVRRGSDVVKALALGAKAVLIGRAYLWGLAANGQAGV 187 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++ L ++ L V EL ++ Sbjct: 188 ENVLDVLSGGIDSALRGLAVGSVAELRPEHLIV 220 >gi|296140764|ref|YP_003648007.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Tsukamurella paurometabola DSM 20162] gi|296028898|gb|ADG79668.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Tsukamurella paurometabola DSM 20162] Length = 335 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 114/334 (34%), Gaps = 53/334 (15%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR 77 G R + +++W R L +D S G P+ ++ T + + Sbjct: 23 GARRGESPWENWRFAPRVL--RDVRSIDTSTSLFGT-WRSPIGVAP-TAFHRLVHAGGET 78 Query: 78 NLAIAAEKTKVAMAVGSQRVMFS---------DHNAIKSFELRQ--------------YA 114 A AA + + S R + + +R A Sbjct: 79 ASARAAVECGAPFVL-SMRATTRIEEVAAAVGGPWWQQVYLMRDRGITDALVQRAAAAGA 137 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 VL + V + G+ A+ ++ + HL P + + N + Sbjct: 138 TALVLTGDTPYVGRSGGRGLPPLDDALALVN---VAQHLAPGADA-WESIEQNAGAVVDD 193 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 I L+ +P+++K V L + + + +G ++ GG R +E Sbjct: 194 IGRLADLTGLPVIVKGV---LRADEARRCVDAGAAGVWVSDHGGRQLG-----RAIEPAR 245 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP- 293 + +A ++A + GG+R+G+D L ++ LGA + P L Sbjct: 246 ALP------------AIAAAIGSDAAVLVDGGVRDGLDALAALALGADAVFVGRPILWAL 293 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A +D V + + L+ E SM L G + EL Sbjct: 294 ASAGADGVRSVLTGLQDELRHSMGLAGATCISEL 327 >gi|111223506|ref|YP_714300.1| putative FMN-dependent lactate dehydrogenase [Frankia alni ACN14a] gi|111151038|emb|CAJ62746.1| putative FMN-dependent lactate dehydrogenase [Frankia alni ACN14a] Length = 445 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + S PLLLK + + S + + ++ G+ ++ GG + + D+ Sbjct: 290 WADVERIRSLWAGPLLLKGL---MRSDECDRLVELGVDGVVVSNHGGRQLDGVPATIDIL 346 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ GG+R G D+ K++ LGA+ + P+L Sbjct: 347 PEV-----------------VDAAAGRLAVFLDGGVRRGNDVAKALALGAAGVFVGRPYL 389 Query: 292 KPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 +A V+ IE LR EF +M LLG V +L + Sbjct: 390 YGLAAGGEAGVLRVIELLRAEFDRAMALLGAATVADLDRS 429 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 20/162 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN+ FD R L +++ D S G++LS P++++ TG Sbjct: 32 AGDEVSLRRNRTAFDRIEFRPRPLADVATR--DLSTTVFGERLSMPIMLAP-TG-----A 83 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH--TVLISNLGAVQLNY 130 R+ R+ A A A A + + +F L A H L L Sbjct: 84 GRLARSSAEIAVARAAARADVVYM-----QSTVAAFPLEDVAAHSTGPLWYQLYLPPDRA 138 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 + V + + G L + ++ + N + + Sbjct: 139 E--VDDLVRRIAAAGYRALAITIDTP---VLGNRERDTRNRL 175 >gi|322369284|ref|ZP_08043849.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haladaptatus paucihalophilus DX253] gi|320551016|gb|EFW92665.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Haladaptatus paucihalophilus DX253] Length = 394 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 104/338 (30%), Gaps = 70/338 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ FD W ++ R L E D SVE LG+ L P++++ + G +I Sbjct: 56 AGSESTKGENRRAFDRWRIVPRML--RDVSERDLSVEILGQTLPVPVMLAPV--GVQSII 111 Query: 73 ERINRNLAIA--AEKTKVAMAVGSQRVMFSDH------NAIKSFELRQYAPHTVLISNLG 124 LA A A V + + S + + + F+L A V Sbjct: 112 HE-EGELATARTAADLDVPLVLSSASSETMEDVAEALGDTLGWFQLYWSADRDVTA---S 167 Query: 125 AVQLNYDFGVQKAHQAVH-------VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 V D G + + D +L + + + F D Sbjct: 168 FVSRAEDAGYEAIVVTLDTPMMGWRERDVDHAYLPFLDGEGVANYLSDPAFRDALDAPPE 227 Query: 178 --------------------------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 L D+P+LLK + L D ++ G+ Sbjct: 228 EDMSSALWRFTETFGDPSLSWDDLDFLREHTDLPILLKGI---LHPDDAREAVERGVDGL 284 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ GG D D+ ++ + G+R G Sbjct: 285 VVSNHGGRQVDGAIGALDALPDVVD-----------------AVGDDVPVLFDSGVRRGA 327 Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESL 308 D +++ LGA L P++ A+ + V + + Sbjct: 328 DAFRAVALGADAVLLGRPYIYGLAIAGREGVRGVLRNF 365 >gi|126740130|ref|ZP_01755820.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. SK209-2-6] gi|126718949|gb|EBA15661.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseobacter sp. SK209-2-6] Length = 398 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 107/371 (28%), Gaps = 82/371 (22%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + RN+ + L E D SV+ LGK + P + + G + + Sbjct: 38 SEATKGRNRAVLASIGFLPSILHG--PQECDLSVDLLGKPCALPFGFAPI-GMSGLVWPN 94 Query: 75 INRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKS--FE--------LRQYAPHTVLIS 121 LA A + ++ V SQ + ++ F+ +R+ + Sbjct: 95 AEARLAKCAAQEQIPYCLSTVASQSPEDLAPHLGENAWFQLYPPKDEGIRRDMLERARDA 154 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLG------------------------------ADGLFL 151 G + L D V + G A+G Sbjct: 155 GFGTLILTVDVPVASRRERQTRSGLTQPPRLTPRLLAQVMRRPAWALGMAWHHRAEGGMP 214 Query: 152 HLNPLQEII-QPNG-----------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 H+ L + + PN + + + L L++K V + D Sbjct: 215 HMRTLDKYVSGPNNARSSTAHIGYLLRTSPNW-NYVKWLRENWQGKLVIKGV---MRPED 270 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + G+ ++ G + + ++ A Sbjct: 271 ASRLQELGVDALWVSNHAGRQFDASPASIEMLP-------------------AIRKACAL 311 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 I G G+DIL+++ LGA L P A + + LRK+ +M Sbjct: 312 PLIFDSGAETGLDILRALALGADFVMLGRAPHFALAALGDQGLTHLCDILRKDLEANMGQ 371 Query: 319 LGTKRVQELYL 329 LG + E+ Sbjct: 372 LGLIKPTEIRK 382 >gi|187921055|ref|YP_001890087.1| L-lactate dehydrogenase [Burkholderia phytofirmans PsJN] gi|187719493|gb|ACD20716.1| L-lactate dehydrogenase (cytochrome) [Burkholderia phytofirmans PsJN] Length = 402 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 108/369 (29%), Gaps = 73/369 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D G+ N+ F + R + D + G + P ++ M G N Sbjct: 43 AGNDAGVAENEAAFGRRFFVSR---RFAPASTDQTATVFGHSYASPFGVAPM-GLANLFY 98 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMF-----SDHNAIKSFEL------RQYAPHTVLIS 121 + LA AA+ + + + ++L R A ++ Sbjct: 99 PGADLLLAQAAQAGNFPFVLSTAASTSIERITKVAPDVSWYQLYLLSDDRLNAELLSRVA 158 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLG-----------------------ADGLFLHLNPLQE 158 G L V A + + A G+ H P E Sbjct: 159 GCGVAVLVLTVDVPVAGRRNSAIRDGVTLPLRWTSALLADVMRRPQWALGMLRHGAPKLE 218 Query: 159 IIQPNGNTNFADL--------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 P+ T + + + L++K + L D + Sbjct: 219 NYAPHAGTADVGAASRHIASVMKMGLEWDDLKKVRAMWPGKLVIKGI---LHPDDAARSV 275 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 G ++ GG + D S+I R + Sbjct: 276 ALGADGIWVSNHGGRQLEGAIASLDALSEI-----------------RRAVGRDTAVFLD 318 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+R G DILK+ LGA L F P A V AA+E L++E V + LG + Sbjct: 319 GGVRTGEDILKACALGAGLCFSGRSFAFPVAAYGERGVRAAVEILKEEIRVGLAQLGVQS 378 Query: 324 VQELYLNTA 332 + L ++ Sbjct: 379 LSALTSDSL 387 >gi|183982758|ref|YP_001851049.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium marinum M] gi|183176084|gb|ACC41194.1| L-lactate dehydrogenase (cytochrome) LldD2 [Mycobacterium marinum M] Length = 414 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + + L++K + + D ++ G ++ GG R L Sbjct: 261 DDLEWMKAQWPGKLVVKGIQ---TLDDARAVVERGADGIVLSNHGGRQLDRAPVPFHLLP 317 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +AR + + + G+ +G DI+ +I LGA + +L Sbjct: 318 -----------------LVARELGKDTEIVVDTGIMSGADIVAAIALGARCTLIGRAYLY 360 Query: 293 PAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 M +A V AIE L +M LLG ++EL Sbjct: 361 GLMAGGEAGVKRAIEILSAGVSRTMRLLGVTCLEEL 396 >gi|284989052|ref|YP_003407606.1| Lactate 2-monooxygenase [Geodermatophilus obscurus DSM 43160] gi|284062297|gb|ADB73235.1| Lactate 2-monooxygenase [Geodermatophilus obscurus DSM 43160] Length = 361 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 23/166 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L + +P++LK V L D L G+ ++ GG R + D Sbjct: 216 WADLAWLRARTRLPIVLKGV---LHPDDARRALDEGVDGVVVSTHGGRQVDRSIAALDAL 272 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF- 290 D+ +A + G+R+G D+L ++ LGA L PF Sbjct: 273 PDV-----------------VAAVGGQAPVLLDSGVRSGADVLTAVALGARAVLLGRPFA 315 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 A+ + V + + EF +++ L G V L+ ++R Sbjct: 316 WGLALAGEEGVRQVVSDVLGEFDLTLGLSGHTAVD--RLSPEVLRR 359 >gi|213419286|ref|ZP_03352352.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 131 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%) Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASG 265 G ++ GG + + + +L +A + +A Sbjct: 4 GADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDIAILADS 45 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+RNG+D+++ I LGA L +L A V ++ + KE V+M L G K + Sbjct: 46 GIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEKEMKVAMTLTGAKSI 105 Query: 325 QELYLNTAL 333 E+ ++ + Sbjct: 106 SEISGDSLV 114 >gi|311112963|ref|YP_003984185.1| L-lactate dehydrogenase [Rothia dentocariosa ATCC 17931] gi|310944457|gb|ADP40751.1| L-lactate dehydrogenase [Rothia dentocariosa ATCC 17931] Length = 412 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + ++ +++K V + D + G+ ++ GG R L Sbjct: 260 EDLKIIREMWPGKIVIKGVQ---NLEDSKKLADLGVDGILLSNHGGRQLDRAPVPFHLLP 316 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + R N+ + + G+ NG DI+ S+ LGA + +L Sbjct: 317 KV-----------------VREVGNDVEVMVDTGIMNGADIVASMALGAKFTLIGRAYLY 359 Query: 293 PAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL--YLNTALIRHQ 337 M V IE L E +M LL + EL T L R Q Sbjct: 360 GLMAGGRRGVDRTIEILSDEVRRTMKLLQVHNIAELEPKHVTQLRRLQ 407 >gi|169334003|ref|ZP_02861196.1| hypothetical protein ANASTE_00395 [Anaerofustis stercorihominis DSM 17244] gi|169258720|gb|EDS72686.1| hypothetical protein ANASTE_00395 [Anaerofustis stercorihominis DSM 17244] Length = 469 Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 41/296 (13%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 FDD + L + DE V + GK L+ P+ IS M+ G + + I Sbjct: 105 GFDDILFLGAQLNPMPLDEHAFVRTTTVI-GKNAKRPMILNNPVYISHMSFGA--LSKEI 161 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNY 130 +L+ + AM G + + + + + +Y P+ ++ N A+++ Sbjct: 162 KVSLSKGSAMAGSAMCSG-EGGILKEEMEAANKYIFEYVPNKYSVTDENLKNADAIEIKI 220 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQP---NGNTNFADLSSKIALLSSAMD 183 G + H + + + PL ++II P G DL + + L D Sbjct: 221 GQGTKPGMGGHLPGGKVTPEIAKVRNKPLGKDIISPSKLEGINTKEDLKNLVDELRERSD 280 Query: 184 V-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P+ +K + G D+E + +G + I GRGG + + RD S Sbjct: 281 GRPIGIK-IAAGRIERDLEYIVYAGADFVTIDGRGGATGASPRIIRDSTS---------- 329 Query: 243 IPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +PT +L AR Y + + + + +GGLR D K+I +GA +AS L A Sbjct: 330 VPTVYALYRARKYLDSVKSDMELVITGGLRVSSDFAKAIAMGADAVAIASAGLMAA 385 >gi|315038928|ref|YP_004032496.1| glycolate oxidase [Lactobacillus amylovorus GRL 1112] gi|312277061|gb|ADQ59701.1| glycolate oxidase [Lactobacillus amylovorus GRL 1112] Length = 347 Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 110/328 (33%), Gaps = 40/328 (12%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 D N+ F D+ + R I E D + LG+K + PL+ + Sbjct: 54 ADDANVHNRVFLDNILVEMRV---IDSVEPDLTTTILGRKYASPLM--------PAAVSH 102 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNYDFG 133 +N+ L+ K A+ ++ + + +++ E + + ++ Sbjct: 103 LNKVLSDKTRKPMQEKAMAARNMDLLNWIGMETNEEYGEIVSQGGDTIRIIKPFADHHKI 162 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQE----IIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 + + A GA + + ++ + +G + + + + +P + K Sbjct: 163 LDEIKFA-EDHGAVAVGIDIDHIAGKNGKYDVVDGIPLGSITMDDLKHYAESTKLPFIAK 221 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + LS D ++G + ++ G + + DI G+ Sbjct: 222 GI---LSVSDALKARQAGCKAIVVSHHHGRVPFGVP-PLAVLPDIKKALAGSGM------ 271 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESL 308 + A G L G D K++ +GA + L + + AV ++ + Sbjct: 272 ----------EIYADGSLMTGYDAYKALAMGADAVLIGCGILSELLQSGTKAVEDKLKQM 321 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ M G K + + +++ + Sbjct: 322 NEQLAEMMMYTGVKDTKSF--DPSVLHY 347 >gi|317121613|ref|YP_004101616.1| ferredoxin-dependent glutamate synthase [Thermaerobacter marianensis DSM 12885] gi|315591593|gb|ADU50889.1| ferredoxin-dependent glutamate synthase [Thermaerobacter marianensis DSM 12885] Length = 477 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 110/327 (33%), Gaps = 63/327 (19%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRAL------PEISFDEVDPSVEFLGK-----KLSFPL 59 ++ + G ++D L PE +D S + +L PL Sbjct: 86 ELLERPLGGLTRVSRWEDVAFNPAQLARPPLPPE---ARIDTSTVIGPRAARPLRLETPL 142 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-------FELRQ 112 L+S+M G + + LA A A GS V+ + S F Sbjct: 143 LVSAM-GYGVGVNKAFALALARGAHMAGTAYNAGSGPVL---PELLDSRGPLILQFTGAS 198 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAH-----------QAVHVLGADGLFLHLN---PLQE 158 + ++ V++ G + +A ++G +G H+ PL E Sbjct: 199 WNRDPGQLARASMVEIRLGHGARAGLGRWIRTDRIPAEARSLMGGEG-AEHMILDAPLPE 257 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-G 217 P F DL ++ P+ +K V D+ +++G + G G Sbjct: 258 SRDPQA---FRDLIERLRR--WTGGAPVAVKLVATHDLERDLLAVVEAGADVIALDGSEG 312 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPT------PLSLEMARPYCNEAQFIASGGLRNGV 271 GT R+ + D+GIPT ++L A + I GGLR Sbjct: 313 GT--------RETPPVLA---DDFGIPTLHALVRAVALLEAAGVRQQVSLIVGGGLRTPG 361 Query: 272 DILKSIILGASLGGLASPFLKPAMDSS 298 + LK++ LGA L + + A Sbjct: 362 EALKALALGADAVYLGTVVMMAATHGQ 388 >gi|20093008|ref|NP_619083.1| glutamine-pyruvate aminotransferase [Methanosarcina acetivorans C2A] gi|19918327|gb|AAM07563.1| glutamine-pyruvate aminotransferase [Methanosarcina acetivorans C2A] Length = 503 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 107/346 (30%), Gaps = 66/346 (19%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +V+ + KL P++I M+ G + ++ ++A A +T M G + Sbjct: 154 DVELETKLAPNLKLDTPIMIGHMSFGAISLNSQL--SMAKAVAETGTYMGTGEGGLHKEL 211 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN------- 154 + ++ + + N+ ++ ++ A +G +N Sbjct: 212 YPYQDHMIVQVASGRFGV--NIDYLERGAAIEIKIGQGAKPGIGGHLPGEKVNEEVSRTR 269 Query: 155 --PL-QEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKS 206 PL + I P + + + + L+ S P+ +K + +S Sbjct: 270 MIPLGSDAISPAPHHDIYSIEDLVQLVRSLKEATEWKKPVFVKIAAVHNVAPIAAGIARS 329 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQ 260 I G G + + + RD GIP ++ + NE Sbjct: 330 SADAVVIDGFRGGTGAAPKVFRDH----------VGIPIEAAIASVDQKLRDQGVRNEIS 379 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------------------------- 294 IASGG+RN D+ KSI LGA + + L Sbjct: 380 IIASGGIRNSADLAKSIALGADAVYIGTAALVALGCRVCGNCYRNLCPWGIATQRPDLVS 439 Query: 295 ----MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I E M G ++ L N +R Sbjct: 440 RLDPEAGAAQVSNLIHGWTLELSELMGAAGINSIESLRGNRDRLRG 485 >gi|323528729|ref|YP_004230881.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1001] gi|323385731|gb|ADX57821.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Burkholderia sp. CCGE1001] Length = 263 Score = 83.0 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 22/165 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + + L+ L++K + L + D + G ++ GG Sbjct: 104 GARDHLSW-EHLKLIRDTWPGKLVVKGI---LHADDARRACELGADGVIVSNHGGRQLDG 159 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + + + GG R G D+L + LGA Sbjct: 160 ACASLRALPRV-----------------VEAVGQRCTVMVDGGFRRGNDVLIAHALGARA 202 Query: 284 GGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + PF A+ ++ AI + E + +M LLG + +L Sbjct: 203 VFVGRPFNYAGAVAGEPGILHAIAIVANEMLRNMALLGVNALSDL 247 >gi|294633094|ref|ZP_06711653.1| lactate 2-monooxygenase [Streptomyces sp. e14] gi|292830875|gb|EFF89225.1| lactate 2-monooxygenase [Streptomyces sp. e14] Length = 386 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 123/356 (34%), Gaps = 58/356 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG--GNNK 70 + N F+ W L+ R + +S E D SV+ G +L+ PL ++ + G G Sbjct: 49 AGDEHTQRANVTAFERWGLVPRMM--VSPTERDLSVDLFGMRLATPLFLAPV-GVIGLCA 105 Query: 71 MIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + A AA +T V M + V + E+ T G QL Sbjct: 106 PDGHGDLATARAAARTGVPMVASTLTVDPME-------EVVAEFGETP-----GFFQLYT 153 Query: 131 DFGVQKAHQAVHVLGA---DGLFLHL---------------NPLQE----IIQPNGNTNF 168 + A V A G+ + L N Q + + F Sbjct: 154 PTDREVAESLVRRAEAAGFKGIVVTLDTWITGWRPRDLTTSNFPQLRGHCLANYFSDPVF 213 Query: 169 ADLSSKIALL---------SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI--AGRG 217 +K + PL ++ S ++ L LK D+ A G Sbjct: 214 RSRLAKAPEDDPGAAVLHWAMTFGNPLTWDDLAWLRSLTELPLILKGICHPDDVRRARDG 273 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G +H +++ G+P +L + + G+R G D++K++ Sbjct: 274 GVDGVYCSNHGGRQANG-------GLPALDALPGVVEAADGLPVLFDSGVRTGADVVKAL 326 Query: 278 ILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 LGA+ G+ P A+ +D +V + SL E + M + G + +L +T Sbjct: 327 ALGATAVGVGRPYAYGAALAGADGIVHVLRSLLAEADLLMAVDGYPTLADLTPDTL 382 >gi|148642428|ref|YP_001272941.1| glutamate synthase (NADPH), subunit 2 [Methanobrevibacter smithii ATCC 35061] gi|222446074|ref|ZP_03608589.1| hypothetical protein METSMIALI_01723 [Methanobrevibacter smithii DSM 2375] gi|148551445|gb|ABQ86573.1| glutamate synthase (NADPH), subunit 2 [Methanobrevibacter smithii ATCC 35061] gi|222435639|gb|EEE42804.1| hypothetical protein METSMIALI_01723 [Methanobrevibacter smithii DSM 2375] Length = 498 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 34/259 (13%) Query: 53 KKLSFPLLISSMTGGN----NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 KL P++I +M+ G KM I +LA T + +R + I + Sbjct: 160 LKLDTPVMIGAMSFGALSKEAKMALAIGSSLAGTVTNTGEGGMLPEERELA--DKLIAQY 217 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNPL-QEIIQPNG 164 ++ + AV++ G + H + A+ + P+ + + P Sbjct: 218 ASGRFGVSADYLKQGDAVEIKIGQGAKSGMGGHLLGEKVTAEVSRIRKIPVGSDALSPAR 277 Query: 165 NTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGG 218 + + +S VP+++K G + D+++ K G + G +GG Sbjct: 278 HMDIVGPEDLSMKISQLREITDWKVPIIVK-FASGKVASDVKIAAKGGADIIVVDGMQGG 336 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVD 272 T D+ + GIP+ ++ A + +A+GG+R+G D Sbjct: 337 T---------GAGPDVIMEHS--GIPSLAAIVEADQALKEINLREDVSLVAAGGIRSGAD 385 Query: 273 ILKSIILGASLGGLASPFL 291 + K++ LGA +A+ L Sbjct: 386 LAKALALGADAVYIATAAL 404 >gi|254819317|ref|ZP_05224318.1| LldD2 protein [Mycobacterium intracellulare ATCC 13950] Length = 404 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 110/360 (30%), Gaps = 68/360 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + I+R ++ F D H A+ +V + LG+ + P I+ TG M Sbjct: 51 AEDELSIERARQAFRDIEF-HPAILR-DVSQVTAGWDVLGQPVVLPFGIAP-TGFTRLMH 107 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFE-------------LRQY 113 A AA + + ++ + D K F+ +R+ Sbjct: 108 TEGEIAGAQAAARAGIPFSLSTLGTCAIEDLVTAVPQGRKWFQLYMWRDRERSMELVRRA 167 Query: 114 APHTV---------------LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 A L N + + ++ AV L PL Sbjct: 168 AEAGFDTLLATVDVPVSGARLRDNRNGMTIPPTLTLRTVLDAVPHPKWWFDLLTTEPLAF 227 Query: 159 II---QPNGNTNFADLS-------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + + + L++K + + D + G+ Sbjct: 228 ASLDRWPGTVAEYLSTMFDPSLTFDDLEWIKEQWPGKLVVKGIQ---TLDDARAVVDRGV 284 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 ++ GG R L +PT AR + + G+ Sbjct: 285 DGIVLSNHGGRQLDRAPVPFHL------------LPTV-----ARDLGQHTEILVDTGIM 327 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQEL 327 +G DI+ ++ LGA + +L M A V AI+ L I +M LLG ++EL Sbjct: 328 SGADIVAAVALGARCTLVGRAYLYGLMAGGAAGVSRAIDILAAGVIRTMRLLGVTCLEEL 387 >gi|261349386|ref|ZP_05974803.1| glutamate synthase family protein [Methanobrevibacter smithii DSM 2374] gi|288861750|gb|EFC94048.1| glutamate synthase family protein [Methanobrevibacter smithii DSM 2374] Length = 498 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 34/259 (13%) Query: 53 KKLSFPLLISSMTGGN----NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 KL P++I +M+ G KM I +LA T + +R + I + Sbjct: 160 LKLDTPVMIGAMSFGALSKEAKMALAIGSSLAGTVTNTGEGGMLPEERELA--DKLIAQY 217 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNPL-QEIIQPNG 164 ++ + AV++ G + H + A+ + P+ + + P Sbjct: 218 ASGRFGVSADYLKQGDAVEIKIGQGAKSGMGGHLLGEKVTAEVSRIRKIPVGSDALSPAR 277 Query: 165 NTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGG 218 + + +S VP+++K G + D+++ K G + G +GG Sbjct: 278 HMDIVGPEDLSMKISQLREITDWKVPIIVK-FASGKVASDVKIAAKGGADIIVVDGMQGG 336 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGLRNGVD 272 T D+ + GIP+ ++ A + +A+GG+R+G D Sbjct: 337 T---------GAGPDVIMEHS--GIPSLAAIVEADQALKEINLREDVSLVAAGGIRSGAD 385 Query: 273 ILKSIILGASLGGLASPFL 291 + K++ LGA +A+ L Sbjct: 386 LAKALALGADAVYIATAAL 404 >gi|319785069|ref|YP_004144545.1| L-lactate dehydrogenase (cytochrome) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170957|gb|ADV14495.1| L-lactate dehydrogenase (cytochrome) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 379 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 20/155 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + LL+K V L D + +G ++ GG S D Sbjct: 238 WDDFRQIRDWWKGRLLVKGV---LHPGDASRLVAAGADGIWVSNHGGRQLDGAVSSIDAL 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + + + G+R G DI+K+ GA++ + L Sbjct: 295 PAI-----------------RQALGAQIPILIDSGIRTGTDIVKAKARGATVAAIGRAAL 337 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ V A++ + E + + L G R QE Sbjct: 338 FGAVAGEPGVAKALDIILDEVVTCLRLCGIPRFQE 372 >gi|288803472|ref|ZP_06408904.1| (S)-2-hydroxy-acid oxidase [Prevotella melaninogenica D18] gi|288334082|gb|EFC72525.1| (S)-2-hydroxy-acid oxidase [Prevotella melaninogenica D18] Length = 316 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 104/326 (31%), Gaps = 74/326 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL-- 79 N+ + D H+ R I E G++ P+++ + + +N+ L Sbjct: 30 NRNYLDSIHVEMRV---IDAIEPILKTVIFGEEFDSPIMMPAFS--------HLNKVLKD 78 Query: 80 --------AIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL---- 123 A AA+K V M + + A ++ +A H +++ + Sbjct: 79 GKKPMLEYARAAKKLNTVNWVGMEPNEEYAEIAAEGARTVRIIKPFADHNIILDEIQFAI 138 Query: 124 --GAVQLNYDFG-VQKAHQAVHVLGADGLF-LHLNPLQEIIQPNGNTNFADLSSKIALLS 179 GA+ + D V V+ L + L+ L+E ++ G Sbjct: 139 KHGAIAVGVDIDHVPGTDGRYDVVDGIPLGPVMLSDLKEYVKAAG--------------- 183 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT-SWSRIESHRDLESDIGIVF 238 VP + K V LS D ++G I+ G + + I Sbjct: 184 ---SVPFVAKGV---LSVQDALKCKEAGCAAIVISHHHGRIPFGVAPVM--VLPKIKAAL 235 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 + GI G+ G D K++ LGA + LKP + Sbjct: 236 EGSGI----------------AIFVDCGIDTGYDAYKALALGADAVAVGRGILKPLLQQG 279 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKR 323 ++ V ++ + ++ M K Sbjct: 280 AEGVEEKVQKMNEQLSELMMYTCVKD 305 >gi|284034142|ref|YP_003384073.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kribbella flavida DSM 17836] gi|283813435|gb|ADB35274.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kribbella flavida DSM 17836] Length = 383 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 114/357 (31%), Gaps = 62/357 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 N F+ W L+ R L E D S LG K+ P++I+ + + + Sbjct: 51 AGSGATARANLAAFERWRLVPRMLRGS--TERDLSCTVLGTKMPAPVVIAPI---GVQTL 105 Query: 73 ERINRNLAIAAEKTKVAM----AVGSQRVMFSDHNAIKSFELR---------------QY 113 + LA A + + + + A K F+L + Sbjct: 106 AHPDGELATARAADALGLTYTHSTQASHAFEQIEAASKWFQLYWPTDRDVCLSFLERARA 165 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL----------NPLQE----- 158 + VL+ L + + + L DGL + P+ E Sbjct: 166 NGYAVLVVTLDTGTIGW-RPADLDRGFLPFLKGDGLANYFTDPAFRAKLAKPVAEDPAAA 224 Query: 159 -IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + N +++ L D P++LK + S D +L + G+ ++ G Sbjct: 225 VMHWAQMFPNVGLGWDELSFLRDNWDGPIVLKGIT---SVDDAKLAAEHGVDGLVVSNHG 281 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + D I + + G+R G D K++ Sbjct: 282 GRQVDGAIAALDALPAIAD-----------------AVGEQVTVLFDSGVRTGADAAKAL 324 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LGA L PFL A+ V + L E +++ L G +EL ++ + Sbjct: 325 ALGAKAVLLGRPFLYGLALAGQAGVEHVLRCLLAELDLTLALSGYANHRELNRDSVV 381 >gi|302695175|ref|XP_003037266.1| hypothetical protein SCHCODRAFT_231408 [Schizophyllum commune H4-8] gi|300110963|gb|EFJ02364.1| hypothetical protein SCHCODRAFT_231408 [Schizophyllum commune H4-8] Length = 421 Score = 82.6 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 107/368 (29%), Gaps = 93/368 (25%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NL 79 N++ F +I R L + + D + G K++ P+ + + G N + + + Sbjct: 71 ANRQAFYRHRIIPRMLVDTNTR--DTATTIFGHKVAAPIGFAPI--GINVIYHPLGELPV 126 Query: 80 AIAAEKTKVAMAV---GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 A AE+ + + GS + + + L + + + Sbjct: 127 AKVAEELNLPYCLSTAGSNSIE----------SVGAANGNGPRFYQLYMPH-DDELTLSL 175 Query: 137 AHQAVH------VLGADGLFL---HLNP-------------------------LQEI-IQ 161 +A ++ D L H + L+E + Sbjct: 176 LKRAYDSGFTACMITVDTWQLGWRHDDVATSNYAFYRGVGADLGLTDPVFQRRLKEAGVD 235 Query: 162 PNGNTNFA-------------DLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 P A K+ + P +K + S D + Sbjct: 236 PKTQPQIAGQMWIDSVWHGRAWTWDKVEWVMKEWKKISGGKPFAVKGIQ---SVADAQKC 292 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++ GI ++ G + D I ++ + Sbjct: 293 VELGIDGIVVSNHAGRQVDGAIASLDALEKIVP-----------------AVGDKIYIMY 335 Query: 264 SGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R D+ K++ LGA + ++ V ++SL +F + M + G + Sbjct: 336 DSGIRGAADVFKALALGAKFVFVGRLWVFGLSIMGEHGVRHVMKSLLADFDILMNVGGFQ 395 Query: 323 RVQELYLN 330 + ++ + Sbjct: 396 SIDQITRD 403 >gi|310814804|ref|YP_003962768.1| (S)-2-hydroxy-acid oxidase [Ketogulonicigenium vulgare Y25] gi|308753539|gb|ADO41468.1| (S)-2-hydroxy-acid oxidase [Ketogulonicigenium vulgare Y25] Length = 361 Score = 82.6 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 109/341 (31%), Gaps = 57/341 (16%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N FD W I D + +FLG LSFP I+ GG + Sbjct: 44 DEVTLRANTADFDKWQWKTPLFAGIGR--PDTATQFLGHSLSFPAFIAPFGGGEYMLDAE 101 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FELRQYAPHTVLISNL------ 123 +R AA + V + A S F++ ++ + Sbjct: 102 GHRATGRAARDVGIRQIVPVAAAHSLEDIATASGVAQMFQVTFVGDVGAVVDMMHRAKAA 161 Query: 124 GAVQLNYDFGV--QKAHQAVHVL------GADGLFLHLNPLQEIIQPNGNTNF------A 169 G Q+ + Q + + A+ N + P Sbjct: 162 GYEQIVATYSPIRQWRERMIEDRTRFAPGKAEA-----NFGPGLSDPAALREQIAFSQPR 216 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 ++ + +P+L+K V +S+ + + L +G ++ GG S R Sbjct: 217 WGWAEAREAIARAPLPILVKGV---MSADEAKQCLDAGAMGLYVSNYGGRSIDR------ 267 Query: 230 LESDIGIVFQDWGIPTPLS-LEMARPYC-NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 P+ +S L R + I G+R G DI ++ LGA+ L Sbjct: 268 -------------QPSAISALPQVRAAAGPDVPIIFDSGIRRGSDIAAAVALGANAVALR 314 Query: 288 SPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A D V ++ L+ E+ ++ LG +L Sbjct: 315 RAVGFGLAADGEAGVRRVLQILKDEYWTTLGHLGCNSTADL 355 >gi|290953455|ref|ZP_06558076.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|295313253|ref|ZP_06803890.1| L-lactate dehydrogenase [Francisella tularensis subsp. holarctica URFT1] Length = 308 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 21/155 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + +++K + + + D + +G ++ GG S + Sbjct: 162 WHDVEWVQKQWNGRMIIKGI---MDTQDAIMAQNTGADAIVVSNHGGRQLDGAPSSISVL 218 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +I + + + G+R G D+LK+ LGA+ G + P + Sbjct: 219 EEI-----------------IDAVDRKLEVLIDSGIRTGQDLLKAKALGATAGLIGRPMV 261 Query: 292 KPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +E +E +M G + Sbjct: 262 YGLGAYGEQGAYRVLEIFYQEMDKTMAFCGHTNIN 296 >gi|195151083|ref|XP_002016477.1| GL10464 [Drosophila persimilis] gi|194110324|gb|EDW32367.1| GL10464 [Drosophila persimilis] Length = 282 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 82/251 (32%), Gaps = 42/251 (16%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL--AIAAEKTKVAMAVGSQRVM 98 ++D E G+K+ +PL I+ + + L A AA + + Sbjct: 23 VSQLDIGCEIFGEKMKWPLGIAPTA---MQKRAHPDDELGNARAAGQAGSIFIL----SN 75 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD---GLFLHLNP 155 S+ + L P T QL + + +H + Sbjct: 76 LSNTSLED---LAAGEPDTFKW-----FQLYIYKDLMITEKMIHRCEGRRRGPTITGTSG 127 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + E + + I L +P+++K + L++ D L + G ++ Sbjct: 128 INEYVAGQLDRTITW--KDIQWLKKVTRLPIVVKGI---LTAEDAVLAKEFGCTGIIVSK 182 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 +G + + + LE+ + ++ + GG+ G+DI K Sbjct: 183 QGARQLYTVPASIEAL-----------------LEVVKAVGHDLVVMLDGGIMQGIDIFK 225 Query: 276 SIILGASLGGL 286 ++ LGA + Sbjct: 226 ALALGAKTVFV 236 >gi|257075522|ref|ZP_05569883.1| Glutamate synthase (NADPH) [Ferroplasma acidarmanus fer1] Length = 694 Score = 82.2 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 103/355 (29%), Gaps = 76/355 (21%) Query: 34 RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN--------KMIERINRNLAIAAEK 85 A+P + + G KLS P+ + M+ G I +A E Sbjct: 62 HAIPNMD---IQTDTMLAGMKLSVPVYLGDMSYGALSGNPNIAIAKTAEITETMAGTGEG 118 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN----------YDFGVQ 135 GS+R+ +A ++ +G + Sbjct: 119 GLYGSVSGSKRIFVQWASARFGVSASSLNQGAAIVIKIGQGAKPGIGGHLPGSKVTHNIS 178 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 A + + A H + + DL+ +I L D P+ +K Sbjct: 179 LARKIPENMDAISPAPH----------HDIYSIEDLTQRIEALKILSDKPVFVKVAATNY 228 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP------TPLSL 249 + +SG I G G + + + RD + GIP + S+ Sbjct: 229 IPYIVTGIARSGAAGVIIDGHGAGTGAAPVAVRD----------NMGIPVELAVASADSI 278 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-----------------K 292 IA+G + N D +K LGA + L + L Sbjct: 279 LKKENLRKNFTIIAAGRVSNSTDAMKLYALGADVVSLGTSILIAMGCIMVKKCNLGYCPV 338 Query: 293 PAMDSSDA------------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +D+ VV I R E M LG ++EL N L+ Sbjct: 339 ALTNRTDSSKSLDIDFAVNRVVNFINGFRSEMAEMMGKLGINSMKELTGNRDLLE 393 >gi|171184932|ref|YP_001793851.1| ferredoxin-dependent glutamate synthase [Thermoproteus neutrophilus V24Sta] gi|170934144|gb|ACB39405.1| ferredoxin-dependent glutamate synthase [Thermoproteus neutrophilus V24Sta] Length = 461 Score = 82.2 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 16/150 (10%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K ++ IE+ + G + G+ GGT + + +D Sbjct: 288 KAKIWIKLGPFRDAAEVIEVASREGADAVVVDGKEGGTGMAPT-----------VALKDL 336 Query: 242 GIPTPLSLE---MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 G PT + L+ AR + + +G L NG + K++ LGA+ ++ PFL A+ Sbjct: 337 GYPTVVGLKYIKAAREAGVKTSLLIAGRLYNGGHVAKAVALGATAVYMSRPFLIAALTKG 396 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ IESL+ E +++ LG V++L Sbjct: 397 EEGVLRYIESLKVELQMAVSALGKYDVKDL 426 >gi|326383585|ref|ZP_08205271.1| Lactate 2-monooxygenase [Gordonia neofelifaecis NRRL B-59395] gi|326197669|gb|EGD54857.1| Lactate 2-monooxygenase [Gordonia neofelifaecis NRRL B-59395] Length = 427 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 IA L +P++LK + L D + G+ ++ GG Sbjct: 283 WDDIATLRDRTSLPIVLKGI---LHPDDARQAVDQGVDGLIVSNHGGRQVDGS------- 332 Query: 232 SDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP- 289 I + +L + +A+ + G G D+ K + LGA + P Sbjct: 333 -----------ISSADALVDVVDAVDGQAKILVDSGFYTGSDVFKGLALGADAVCIGRPH 381 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 A+D +D A+ ++ E +++ L G + V +L Sbjct: 382 MYGLALDGTDGARDAVANIIGELDLTLGLSGHRDVADLDRT 422 >gi|126726672|ref|ZP_01742512.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] gi|126704001|gb|EBA03094.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Rhodobacterales bacterium HTCC2150] Length = 348 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 108/366 (29%), Gaps = 74/366 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 G N++ D L+ R L + V +V ++ P ++ M G ++ Sbjct: 10 AGDGQGEASNRQTLRDIRLMPRVLNNVMQRSV--AVNLFDQQCELPFGVAPM--GMCRLA 65 Query: 73 ERI-NRNLAI-AAEKTKVAMAVGSQRVMFSD----HNAIKSFELRQYAPHT---VLISNL 123 + +R LA AA D F+L L++ Sbjct: 66 NPMADRALAEMAARHKVPVGVSTVSSSSLEDMAKWSEGQAWFQLYCSGNQGGIDPLLARC 125 Query: 124 GAV---QLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQ---------------------- 157 A L V + + + + + P Q Sbjct: 126 KAAGYETLVVTVDVPEVGRRPRELRRGFKMPFKMGPSQFFDFACHPRWSLGTLAKGAPKL 185 Query: 158 ---EIIQPNGNTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + + + ++ + L++K V L+ D + + G+ Sbjct: 186 ANFGGVHGEFDRTASRAGADWTLLSEIREKWQGRLVVKGV---LNVEDAKKLVSVGVDAI 242 Query: 212 DIAGRGGT----SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 ++ GG S I + RD+ + +G F G+ Sbjct: 243 QVSSHGGRQLNSSLDAITALRDIRAALGPDF---------------------PLFYDSGI 281 Query: 268 RNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++G D+ K+ LGA L A D + ++ L +E +++ LG + Sbjct: 282 QSGEDVAKAYALGADFVFLGRVLSFALAADGRRGLHQMVDVLHRETDITLAQLGVTSMDA 341 Query: 327 LYLNTA 332 L + Sbjct: 342 LGQSNL 347 >gi|110676211|gb|ABD65949.1| hydroxyphenylglycine aminotransferase/hydroxymandelate oxidase fusion protein [Streptomyces fungicidicus] Length = 808 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 107/339 (31%), Gaps = 49/339 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + N FD L L LG+ PL ++ + + Sbjct: 28 AGEERTLAANTAAFDRVPLRPSVLRGAG--SPHTGTTILGRTWDAPLAVAPVA---YHTL 82 Query: 73 ERINRNLAIA---AEKTKVAMAVGS-QRVMFSDHNAIKS-------FELRQYAPHTVLI- 120 +A A + + V + F D A + + LR + LI Sbjct: 83 ADPAGEVATVRGTAAAAGLPVVVSTFAGRTFEDIAAEATVPLWLQVYCLRDRSLTRGLIE 142 Query: 121 --SNLGAVQLNYDFGVQKAHQAVHVL--------GADGLFLHLNPLQEIIQPNGNTNFAD 170 N G L + + L G L ++ + + Sbjct: 143 RAENAGFEALVLTVDAPHLGRRLRDLRNGFRLPAGTVPANLPVDGFADPAAHSRADFDPG 202 Query: 171 L-SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 L S + L S ++PLL+K + L+ D ++G+ ++ GG + + D Sbjct: 203 LDWSVVEWLRSVSELPLLVKGI---LTGADAVRAAEAGVDGVMVSNHGGRQLDGVPATLD 259 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + ++ + GG+R G DIL ++ LGA + P Sbjct: 260 VLPEVAE-----------------AVGGRLPVLLDGGVRRGRDILAALALGADAALVGRP 302 Query: 290 FLKPAMDSSDAVVAAIES-LRKEFIVSMFLLGTKRVQEL 327 L V + S L +E +M L G + + ++ Sbjct: 303 VLHGLAAGGAGGVTGVLSVLLEELTDAMSLAGLRTLADI 341 >gi|254473789|ref|ZP_05087184.1| ferredoxin-dependent glutamate synthase [Pseudovibrio sp. JE062] gi|211957175|gb|EEA92380.1| ferredoxin-dependent glutamate synthase [Pseudovibrio sp. JE062] Length = 538 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 110/297 (37%), Gaps = 46/297 (15%) Query: 26 FDDWHLI----HRALPEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERIN 76 ++D ++ HR P + + V V K +L PL +S M+ G +I Sbjct: 168 WEDIQILTAQLHRP-PRLDEEPVGTDVVIGPKAQKPLRLQIPLFVSDMSFGALSEPAKI- 225 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH--TVLISNLGAVQLNYDFGV 134 LA AE + G + M + A S + A L VQ + G Sbjct: 226 -ALARGAESVGTGICSG-EGGMLPEEQAENSRYFYELASARFGFSWEQLERVQAFHFKGG 283 Query: 135 QKAHQ-------AVHVLGADGLFLHLNPLQEIIQPNGNT------NFADLSSKIALLSSA 181 Q A A V LNP + I P +F + + ++ Sbjct: 284 QAAKTGTGGHLPAAKVTEKIAAVRGLNPGEGAISPARFPEWMKPSDFRNFADEVRD--RT 341 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+ K + DI+ L+ G+ Y + GRGG + + RD + Sbjct: 342 GGIPIGFKLSAQHIEK-DIDAALEVGVDYIILDGRGGGTGASPLVFRD----------NI 390 Query: 242 GIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +PT +L AR + + + + +GGLR D +K++ LGA LA+ ++ Sbjct: 391 SVPTIPALARARRHLDRSGQRDVTLVITGGLRKPEDFVKAMALGADAVALANAPMQA 447 >gi|162146137|ref|YP_001600596.1| L-lactate dehydrogenase [Gluconacetobacter diazotrophicus PAl 5] gi|209544506|ref|YP_002276735.1| L-lactate dehydrogenase (cytochrome) [Gluconacetobacter diazotrophicus PAl 5] gi|161784712|emb|CAP54252.1| putative L-lactate dehydrogenase [Gluconacetobacter diazotrophicus PAl 5] gi|209532183|gb|ACI52120.1| L-lactate dehydrogenase (cytochrome) [Gluconacetobacter diazotrophicus PAl 5] Length = 412 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 22/162 (13%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + + L+LK + LS+ D + G ++ G Sbjct: 268 WDHIRAIRRSWPGRLVLKGI---LSAQDAVTAQQIGADGIIVSNHGAR------------ 312 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 D I +L R C + + G+R D++ +I LGA + PF Sbjct: 313 ------LCDCVISPLEALPAIRQACPDLTVLLDSGVRRAGDVITAIALGADGVMIGRPFF 366 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + AI + E M LG ++E N Sbjct: 367 FATILGGQPGLAHAIGLIAGELDRDMAFLGLLDLRESRENRL 408 >gi|326201260|ref|ZP_08191132.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium papyrosolvens DSM 2782] gi|325988828|gb|EGD49652.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium papyrosolvens DSM 2782] Length = 300 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 106/314 (33%), Gaps = 47/314 (14%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN--- 78 + +FD + R I ++E G+ S P+ MT + + +I+ N Sbjct: 18 TRHYFDSLLIEMR---HIDSVLPSTALELYGENFSSPI----MTAALSHL--KIDGNNGM 68 Query: 79 --LAIAAEKTKVAMAVG-SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 +A A+ + M G A + ++ PH+ ++ GV Sbjct: 69 VEMAKGAKASNAVMWTGMGDEAELEAITATGAKTIKIIKPHSDNNIIFKRIEHAEKCGVL 128 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + N + G +I +A +P ++K V L Sbjct: 129 ALGMDIDH--------SFNSKGDFDNVLGFPMSGKTLDEIKEFVNATKLPFIIKGV---L 177 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARP 254 S D L++G++ I+ G D+ +P + L ++A+ Sbjct: 178 SEKDTYKCLEAGVKGIVISHHHG-------------------IIDYAVPPLMVLPKIAKM 218 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFI 313 G+ +G+D+ K++ LGA + + D +D V IE + KE Sbjct: 219 VKRSIPIFVDCGIASGIDVFKALALGADAVSVGRTLIPHLNKDGADGVRNIIEEMTKELA 278 Query: 314 VSMFLLGTKRVQEL 327 M +K + + Sbjct: 279 GVMARTCSKDIASI 292 >gi|71020841|ref|XP_760651.1| hypothetical protein UM04504.1 [Ustilago maydis 521] gi|46100153|gb|EAK85386.1| hypothetical protein UM04504.1 [Ustilago maydis 521] Length = 421 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 14/152 (9%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++LK + + D +++G+ ++ GG + I + Sbjct: 278 PIVLKGIQ---TLSDAARAVEAGMDGVWVSNHGGRQVDGAVPSLNQLPVIAEYIRS---- 330 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVA 303 + I G+R G DI+K++ LGA + P+ A++ D V Sbjct: 331 -----LPLKEGEERKTVIFDSGVRCGADIMKALCLGADAVAVGRPWCWGLALNGEDGVRD 385 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +++L +F ++ L G + +L AL+R Sbjct: 386 VLKTLLADFELNAGLAGFQSASQLSR-HALVR 416 >gi|71279855|ref|YP_268633.1| glutamate synthase domain-containing protein [Colwellia psychrerythraea 34H] gi|71145595|gb|AAZ26068.1| glutamate synthase domain protein [Colwellia psychrerythraea 34H] Length = 515 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 43/265 (16%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G +I LA AE + G + M + A S + Sbjct: 181 LKLRIPLFVSDMSFGALSEEAKI--ALATGAELAGTGICSG-EGGMLPEEQAANSKYFYE 237 Query: 113 YAP-----HTVLISNLGAVQLNYDFGVQKA-------------HQAVHVLGADGLFLHLN 154 A + N+ A G + V + A + Sbjct: 238 LASAQFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGIKNIGKIAKVRGIEAGTSAISPP 297 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +++I +F ++++ ++ +P+ K + DI+ L + Y + Sbjct: 298 TFKDLITVE---DFKKFANRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILD 351 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLR 268 GRGG + + E RD S +PT +L AR Y +E I +GGLR Sbjct: 352 GRGGGTGAAPEIFRDHIS----------VPTIPALARARKYLDEQGANGRVTLIITGGLR 401 Query: 269 NGVDILKSIILGASLGGLASPFLKP 293 +D +K++ LGA +++ ++ Sbjct: 402 VPIDFVKALALGADGVAVSNSAMQA 426 >gi|84687797|ref|ZP_01015667.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664169|gb|EAQ10663.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Rhodobacterales bacterium HTCC2654] Length = 372 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 22/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L D P+++K V ++G+ ++ G + + Sbjct: 228 WDYLAGLRETWDGPIIVKGVT---DPEVAPRLAEAGVDAIWLSNHAGRQFDGAPAALPAL 284 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R + I GG+ +G+D+ ++I +GA L + Sbjct: 285 PAI------------------RAALPDMPLIYDGGVNSGLDVARAIAMGADFVMLGKAWH 326 Query: 292 KPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTKRVQEL 327 A + L+ + + +G R+ +L Sbjct: 327 WGLGAFGAAGADHVAHILKADLASVLAQIGAARLADL 363 >gi|309799715|ref|ZP_07693932.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] gi|308116671|gb|EFO54130.1| isopentenyl-diphosphate delta-isomerase [Streptococcus infantis SK1302] Length = 84 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 A AE + GS D + SF ++ P +L +N+G D V+ Q Sbjct: 2 AQVAEACGILFVTGSYSAALKDPS-DDSFAVKSNRPDLLLGTNIG-----LDKPVELGLQ 55 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 V + L +H+N +QE++ P G F Sbjct: 56 TVKEMNPLLLQVHVNVMQELLMPEGERQF 84 >gi|163841456|ref|YP_001625861.1| L-lactate dehydrogenase [Renibacterium salmoninarum ATCC 33209] gi|162954932|gb|ABY24447.1| L-lactate dehydrogenase [Renibacterium salmoninarum ATCC 33209] Length = 426 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L + LL+K V S D + + G ++ GG R L Sbjct: 281 LDWLRANWHGNLLVKGVQ---SVTDAQKAIDHGADGVVLSNHGGRQLDRAPLPFHL---- 333 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 IP + EA + G+ G DI+ +I GA + +L Sbjct: 334 --------IPKVRA-----TVGTEATIMMDTGIMCGGDIIAAIASGADFTLIGRAYLYGL 380 Query: 295 MDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 M V ++E LR E + +M LLG ++ +L Sbjct: 381 MAGGQRGVARSLEILRTEMVRTMTLLGVTKISDL 414 Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 ++ ++R+++ FD L +VD + + GK S P+ I TG Sbjct: 78 ADREITMNRSRQAFDHLEFNPEVLH--DVSKVDLNTKIFGKTSSMPIGIGP-TG 128 >gi|21227069|ref|NP_632991.1| glutamate synthase, large chain [Methanosarcina mazei Go1] gi|20905394|gb|AAM30663.1| glutamate synthase, large chain [Methanosarcina mazei Go1] Length = 503 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 106/346 (30%), Gaps = 66/346 (19%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +V+ + KL P++I M+ G + ++ ++A A +T M G + D Sbjct: 154 DVELDTKLAPNLKLDTPIMIGHMSFGAISLNSQL--SMAKAVAETGTFMGTGEGGLH-KD 210 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP------ 155 ++ + Q A N+ ++ ++ A +G +N Sbjct: 211 LYPYQNHMIVQVA-SGRFGVNIDYLERGAAIEIKIGQGAKPGIGGHLPGEKVNDEVSRTR 269 Query: 156 ----LQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKS 206 + I P + + + + L+ S P+ +K + +S Sbjct: 270 MIPLGSDAISPAPHHDIYSIEDLVQLIRSLKEATEWKKPVFVKIAAVHNVAPIAAGIARS 329 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQ 260 I G G + + + RD GIP ++ + NE Sbjct: 330 SADAVVIDGFRGGTGAAPKVFRDH----------VGIPIEAAIASVDQKLRDQGVRNEIS 379 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------------------------- 294 IASGG+R+ D+ KSI LGA + + L Sbjct: 380 IIASGGIRSSADLAKSIALGADAVYIGTAALVALGCRVCGNCYRNLCPWGIATQRPDLVS 439 Query: 295 ----MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I E M G ++ L N +R Sbjct: 440 RLDPEAGAAQVSNLIHGWTLELSELMGAAGINSIESLRGNRDRLRG 485 >gi|330922131|ref|XP_003299710.1| hypothetical protein PTT_10763 [Pyrenophora teres f. teres 0-1] gi|311326491|gb|EFQ92181.1| hypothetical protein PTT_10763 [Pyrenophora teres f. teres 0-1] Length = 437 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 113/374 (30%), Gaps = 90/374 (24%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL-- 79 N++ F +I R L + ++ D + E G K+ P+ + + G NK+ L Sbjct: 71 NRQSFYRHRIIPRML--VDTNQRDTATEIFGHKVPAPIGFAPV--GINKIYNP-EGELPV 125 Query: 80 AIAAEKTKVAMAV---GSQRVMFSDHNAIKSFELRQ--------------------YAPH 116 A A + + GSQ D +R+ Y PH Sbjct: 126 ARAVGTLGLPYCLSTAGSQS--IEDVGLANDQGVRKRSDGETAAGGGEKGVRFFQLYMPH 183 Query: 117 TVLISNLGAVQLNYDFGVQKAH----------QAVHVLGADGLFLHL--------NP--- 155 ++ +Q D G + V ++ F H +P Sbjct: 184 DDELTR-SILQRAVDSGFSACILTLDTWQLGWRHDDVANSNYAFYHGLGADLGLTDPVFQ 242 Query: 156 --LQE-IIQPNGNTNFAD-------LSSKIALLSSAMDVPLLLKEVGCGL--------SS 197 L+E I P N A + A+ L KE+ G S Sbjct: 243 KRLKEKGIDPKTQPNEAGALWIDNVWHGRAHTWEKAVWAMKLWKELSGGKPFSLKGIQSV 302 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D + + G ++ G + D I + Sbjct: 303 DDAKKAVDLGFDGIVVSNHAGRQVDGAVASLDSLEKI-----------------VDAVGD 345 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSM 316 + + G+R+ D++K++ LGA + A+ V + SL + + M Sbjct: 346 KIYIMFDSGVRSVSDVVKALALGARFVFVGRLWIWGLAIMGETGVNHVMRSLLADLDILM 405 Query: 317 FLLGTKRVQELYLN 330 + G + + E+ + Sbjct: 406 NVGGFRNIGEITRD 419 >gi|15678133|ref|NP_275248.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621136|gb|AAB84604.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 622 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 122/316 (38%), Gaps = 68/316 (21%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHR--ALPEIS-FDEVDPSVEFLGKK-------LSFPLL 60 V + G +R FDD ++ ++P + + E + LG + L P+L Sbjct: 237 KYVLRGFGTERRLPNFDDIIILPAQASIPPVDKYREPCNTSVVLGDRFAEEPLVLQTPVL 296 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQYAPHTV 118 I+ M+ G ++++K+AMA GS V + E R+ A + + Sbjct: 297 IAGMSFGA-------------LSKESKLAMAKGSSMVGSCANTGEGGMLPEERELADNLM 343 Query: 119 LISNLGAVQLNYDF-------GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + G ++ D+ V+ A +G L ++P E+ + G D Sbjct: 344 VQYSSGRFGVSSDYLNVADAIEVKIGQGAKPGMGGHLLAEKVSP--EVAKIRGIPEGTDA 401 Query: 172 SS--------KIALLSSAM---------DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 S + L+ + VP+++K +G G D+++ ++G + Sbjct: 402 LSPARFLDATREGDLAKHIELLREVTDWRVPIVVK-LGPGRVYEDVQIAAEAGADVISVD 460 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G G + + E + G+PT +L A +E I +GG+R Sbjct: 461 GMEGGTGAAPEVVIEHT----------GVPTLAALVQAVNGLNDIGLKDEVDLIITGGIR 510 Query: 269 NGVDILKSIILGASLG 284 +G D+ K++ +GA Sbjct: 511 SGADVAKAMAMGADAV 526 >gi|284033923|ref|YP_003383854.1| (S)-2-hydroxy-acid oxidase [Kribbella flavida DSM 17836] gi|283813216|gb|ADB35055.1| (S)-2-hydroxy-acid oxidase [Kribbella flavida DSM 17836] Length = 375 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 24/148 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + D+PL++K + L D ++ G ++ GG Sbjct: 232 WADLEWLGARSDLPLVVKGI---LDPRDARRAVEVGATGIVVSNHGGRQLDGA------- 281 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P+ +L + N AQ + G+R+G D+L+++ LGAS + P Sbjct: 282 -----------VPSVDALPAVVDAVGNSAQLLLDSGIRSGTDVLRALALGASGVLVGRPL 330 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFL 318 L A A++ LR E +M L Sbjct: 331 LWALSLG--ACDQALDLLRTEVSDAMML 356 >gi|15679660|ref|NP_276777.1| glutamate synthase (NADPH), alpha subunit related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622795|gb|AAB86138.1| glutamate synthase (NADPH), alpha subunit related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 383 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 109/297 (36%), Gaps = 40/297 (13%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERIN 76 DD H + +P + D V V +L P++IS M+ G RI Sbjct: 42 GLDDLHFLPAQVSKIPLNAEDPVKTDVIIGPESKRPLRLKSPIIISGMSYGAVSEKTRI- 100 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGAVQLNYDFG 133 +A A++ K+ G V+ + + + QY+ I+ GA + FG Sbjct: 101 -AIASVADRLKIGFNSGEGGVLQRELEKAGDYLIIQYSTGRFGITEDVLRGAAAIEIRFG 159 Query: 134 V-----QKAHQAVHVLGADGLFL-HLNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDV 184 + ++ + D + L P + P + + D L K+ L Sbjct: 160 QGAYPGKGSYLPPDKISPDVARVRGLAPGEGSYSPAHHHDIRDQMELEEKVKELRKMSGG 219 Query: 185 -PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ K +GCG D++ L +G+ + + G GG + + RD + GI Sbjct: 220 APIGAK-IGCGNVEDDVKALLDAGVDFISLDGFGGGTGAVNPHIRD----------NTGI 268 Query: 244 PTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 P ++ A + + IA GGLR D+ K + LGA + L Sbjct: 269 PLIAAIPRAVKTVINEGHGDRVSLIAGGGLRTAADMAKCLALGADAVYTGTAALIAL 325 >gi|220933674|ref|YP_002512573.1| ferredoxin-dependent glutamate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219994984|gb|ACL71586.1| ferredoxin-dependent glutamate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 502 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 100/264 (37%), Gaps = 40/264 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF---- 108 KL PL +S M+ G+ ++ LA A++ + G +M + A + Sbjct: 175 LKLDIPLFVSDMSFGSLSREAKL--ALAKGAQRAGTGICSGEGGMMPEEREANPRYLYEL 232 Query: 109 ELRQYAPHTVLISNLGAVQLN-------------YDFGVQKAHQAVHVLGADGLFLHLNP 155 ++ L++ +GA+ V + V L + Sbjct: 233 ASARFGYDESLLAKIGALHFKGGQAAKTGTGGHLPGRKVTEEIAKVRGLKPGKSAISPPT 292 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +++ P+ FA ++ + +P+ K + + DI+ LK+ Y + G Sbjct: 293 FTDLVMPDDFRRFA---DRVREVCG--GIPVGFKLSANHIEA-DIDFALKASADYLILDG 346 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNG 270 RGG + + RD S +PT +L AR + + + I +GGLR Sbjct: 347 RGGATGAAPRLFRDHIS----------VPTIPALVRARRHLDERGAGDVTLIITGGLRLP 396 Query: 271 VDILKSIILGASLGGLASPFLKPA 294 D +K++ LGA +A+ ++ Sbjct: 397 EDFIKALALGADGIAIANSAIQAV 420 >gi|121592943|ref|YP_984839.1| (S)-2-hydroxy-acid oxidase [Acidovorax sp. JS42] gi|120605023|gb|ABM40763.1| (S)-2-hydroxy-acid oxidase [Acidovorax sp. JS42] Length = 365 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 109/347 (31%), Gaps = 53/347 (15%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 D + N+ F W ++ R L ++ + G L PLL++ + + ++ Sbjct: 35 CGWDRTVAANRAAFTAWAIVPRLLRDVRGGH--TRLTLGGLDLPHPLLLAPVA--HQRLA 90 Query: 73 ERINR-NLAIAAEKTKVAMAVGSQRV-----------------MFSDHNAIKSFELRQYA 114 A AA+ T + + ++ + L + A Sbjct: 91 HSEAEVATARAAQATGTCLVASTLSSCTLETIAGAAGPARWFQLYLQPEREHTLALLRRA 150 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHLNPLQEIIQPNGNTNFAD 170 + + + + + A QA V+ AD L + P ++ + + F Sbjct: 151 EAAGYRAIVLTLDASIQLASRSALQAGFVMPADCTPANLAAYPPPAPPVLGADDSRIFQG 210 Query: 171 ------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + L +P+ +K V + D +G I+ GG S Sbjct: 211 AMRHAPTWDDLRWLLGETRLPVWIKGV---MHPDDARALQAAGAAGLIISNHGGRSLDGA 267 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + +P + + GG+R+G D K++ LGA Sbjct: 268 PASLHR------------LPAVRA-----AVGEGYPVLLDGGVRSGADAFKALALGADAV 310 Query: 285 GLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + A+ + V ++ L +E M G ++ ++ N Sbjct: 311 LIGRLQMYALAVAGALGVAHMLQLLTEELHACMAQAGCAQLCDITPN 357 >gi|294496437|ref|YP_003542930.1| glutamate synthase (NADPH) GltB2 subunit [Methanohalophilus mahii DSM 5219] gi|292667436|gb|ADE37285.1| glutamate synthase (NADPH) GltB2 subunit [Methanohalophilus mahii DSM 5219] Length = 504 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 112/335 (33%), Gaps = 63/335 (18%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 +L P++I M+ G + ++ +LA AA KT M G + + + ++ Sbjct: 165 NLELQTPIMIGHMSYGAISLNAQL--SLAKAAAKTGTYMGTGEGGLHKDIYPYQDNMIVQ 222 Query: 112 QYAPHTVLISNL----GAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 + + N A+++ G + H + D + P + I P Sbjct: 223 VASGRFGVDINYLERGAAIEIKIGQGAKPGIGGHLPGEKVCTDVSCTRMIPAGSDAISPA 282 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ ++ P+ +K + +S I G G Sbjct: 283 PHHDIYSIEDLAQLVRGLKEATEWKKPVFVKIAAVHNVAAVAAGIARSSADAVVIDGFRG 342 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + + RD + GIP ++ + N+ IASGG+RN D Sbjct: 343 GTGASPKVFRD----------NVGIPIEAAVASVDQKLNDQGIRNKVSVIASGGIRNSAD 392 Query: 273 ILKSIILGASLG--GLASPF-----------------------------LKPAMDSSDAV 301 I KSI LGA G A+ L P ++S + V Sbjct: 393 IAKSIALGADAVYIGTAALISMGCRVCGNCYRGLCPWGIATQREDLVSRLDPEVES-EHV 451 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I S E M G ++ L N + +R Sbjct: 452 ANLINSWTLELSELMGAAGINSIESLRGNRSRLRG 486 >gi|241736245|ref|XP_002413976.1| glycolate oxidase, putative [Ixodes scapularis] gi|215507830|gb|EEC17284.1| glycolate oxidase, putative [Ixodes scapularis] Length = 318 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 98/308 (31%), Gaps = 53/308 (17%) Query: 40 SFDEVDPSVEFLG-KKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQR- 96 + + V L + +S P+ IS + R A AA+ + + G Sbjct: 18 DVAQRNMEVTLLEDQVVSMPVGISPTA--FQNLAHRDGETATARAAQSARTLLMQGLFSC 75 Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D +++ AP + L + + +A G L L ++ Sbjct: 76 ITIED--------VKKAAPDGLQWLQL-YIFKDRSITRDIVERA-ERAGYRALVLTVD-- 123 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG------------------LSSM 198 P A +IA + + P + K V L+ Sbjct: 124 ----MP-----IAG--KQIARIKNKFKTPKVAKYVETFAGYIPNKAYAYGGFLDPSLTWD 172 Query: 199 DIELGLKS-----GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 D+ + S + ++ VF W + + E+ Sbjct: 173 DVTWLKSITKLPVIAKGICNGNYRIRSDCDHSQVVPVGLELSSVFL-WMLQIEVLPEVVT 231 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEF 312 + GG+R G D++K++ LGA + P L A + + V +E LR+E Sbjct: 232 AVRGRVEVYVDGGVRRGTDVVKALALGAKAVFVGRPVLWALAYNGEEGVREMLEILRQEL 291 Query: 313 IVSMFLLG 320 ++ L+G Sbjct: 292 DRALALMG 299 >gi|241998334|ref|XP_002433810.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215495569|gb|EEC05210.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 126 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 L++ D E +K G+ ++ GG + S + ++ R Sbjct: 12 LTAQDAEEAIKHGVSAILVSNHGGRQLDGVPSSIEALPEV-----------------VRA 54 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLR 309 + GG+R G DI+K++ LGA +A P A + V +E L+ Sbjct: 55 VRGRVEVYMDGGVRRGTDIIKALALGARAVFVARPTIWGLAYNGQAGVSRMLEILQ 110 >gi|221134370|ref|ZP_03560675.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Glaciecola sp. HTCC2999] Length = 382 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 102/368 (27%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKM 71 + G+ RN L L P + VD SV+ G + + P I+ + + Sbjct: 35 CIDEIGLHRNTNELQQVRLRSELLSPSVD---VDTSVDLFGHRYAAPFGIAPV---GLQG 88 Query: 72 IERIN--RNLAIAAEKTKVA----------------MAVGSQRVMFSDHNAIKS------ 107 + N LA AA K + ++ G + + Sbjct: 89 LMWPNAPEILAKAAAKMNIPYVLSTVSSSSLERIAEVSEGQAWYQLYNPTDANTREDLLD 148 Query: 108 ------FELRQYAPHTVLIS-NLGAVQLNYDFGVQK-----AHQAVHVLGADGLFLHLNP 155 ++ + ++ + L P Sbjct: 149 RLKASGYQNIMVTVDVPTFGYRVNDIKNGLSMPPKMSLTNIIQMLTKPSWLLATALAGKP 208 Query: 156 LQEIIQP---------------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 E ++P N + +L D ++K + ++ D+ Sbjct: 209 EMETLKPYMPPNMPADQLASFMNNTVMGPVDFDALKVLRDKWDGNFIIKGI---VNPSDV 265 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + + G ++ G ES + ++D + + Sbjct: 266 QKAVDMGADGVVLSNHGARQLDCGESSIAGLQALNNQYKD-----------------QIK 308 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G D+ ++ GA L F+ A + AI L +++I M L Sbjct: 309 LLFDSGVRSGTDVAAAMASGADFTFLGRTFVYAAAALGKNGGTHAINMLLRQYIQVMSQL 368 Query: 320 GTKRVQEL 327 +L Sbjct: 369 KCAHSSQL 376 >gi|254439408|ref|ZP_05052902.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] gi|198254854|gb|EDY79168.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] Length = 395 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 23/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L D P++LK V G+ ++ G + + DL Sbjct: 253 WEYVRHLRDEWDGPIVLKGV---CEPEVAAKAQNEGVDAVWVSNHAGRQFDATPASIDLL 309 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 DI + I G+ G+DIL+++ LGA + + Sbjct: 310 PDI-------------------RAATDLPVIFDSGIEGGLDILRALALGADFVFMGRAWH 350 Query: 292 KPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + L K+ + +M +G +++L Sbjct: 351 YALGALGANGPAHLHDILAKDMMSNMAQIGATSIEDL 387 >gi|329936378|ref|ZP_08286143.1| oxidoreductase [Streptomyces griseoaurantiacus M045] gi|329304174|gb|EGG48055.1| oxidoreductase [Streptomyces griseoaurantiacus M045] Length = 389 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 114/364 (31%), Gaps = 80/364 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKK------------------ 54 N+ + ++ R L E D SVE LG+ Sbjct: 51 AGDGSTARANRAALERHRIVPRML--RDVHERDLSVEVLGRPLPAPLALAPVGVLSIMHP 108 Query: 55 ------------LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 L P +SS ++ +E + R ++ A D Sbjct: 109 EAESAAARAATALGVPFTLSSA---SSTPLEEVARASGEGERWFQLYWA--------KDR 157 Query: 103 NAIKSFELRQYAP---------HTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGL 149 +SF R A T L++ +L L + GV A+ A GL Sbjct: 158 EVTRSFLRRAKAAGFTALFVTLDTPLLAWRPRDLDQAYLPFLRGVGTANYFTDPAFAAGL 217 Query: 150 F--LHLNPLQEIIQ-PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +H +P ++ N + +A L D P++LK V L D L ++ Sbjct: 218 AKPVHEDPDAAVLHFVNMFADPGKTWPDLAFLRENWDGPIVLKGV---LHPDDARLAAEA 274 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G+ ++ GG + + D + D + G Sbjct: 275 GMDGVVVSNHGGRQVAGSLAAADALPAVAAAVGD-----------------RLTILFDSG 317 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++K++ LGA L P+ +D V + + E +++ L G V Sbjct: 318 IRTGDDVVKALALGAEAVLLGRPYAYGLGLDGQAGVEHVLRCVLAELDLTLALSGHAGVG 377 Query: 326 ELYL 329 L Sbjct: 378 TLTR 381 >gi|115622703|ref|XP_001202514.1| PREDICTED: similar to MGC108441 protein, partial [Strongylocentrotus purpuratus] gi|115631783|ref|XP_796994.2| PREDICTED: similar to MGC108441 protein, partial [Strongylocentrotus purpuratus] Length = 294 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 70/176 (39%), Gaps = 15/176 (8%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N ++ A I L +P+++K + S + I L + + Sbjct: 102 NDTSDDAATWDNIRWLKKISSIPIVVKGILTDESVISISLLDDEEV-----------TLM 150 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + I + +D + + A + GG+R G DI+K++ LGA Sbjct: 151 AYQLDDEAVVVIAYLLEDEKLDALPEVVEA-VRGTNIEVYVDGGVRTGTDIIKALALGAR 209 Query: 283 LGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P + A + + ++ L+ EF +M L G +V+++ + +L+ H+ Sbjct: 210 AAFIGRPAVYGIACGGEEGLTDLLDILKDEFSRAMALSGCAKVEDI--DRSLVNHR 263 >gi|78044813|ref|YP_359561.1| glutamate synthase,-like protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996928|gb|ABB15827.1| glutamate synthase, homolog [Carboxydothermus hydrogenoformans Z-2901] Length = 500 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 105/335 (31%), Gaps = 67/335 (20%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------ 107 KL P++ S M+ G+ + + LA AA++ + M G + + Sbjct: 163 KLDTPIIFSPMSYGSISLNAH--KALARAAKECGILMNTGEGGLHKELYPYKDWIIVQVA 220 Query: 108 ---FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 F + Q + + Q + +K ++ V + + L Sbjct: 221 SGRFGVNQEYLDHSAVVEIKIGQGAKPGIGGHLPGEKVNR--EVSETRMIPEGTDALSPA 278 Query: 160 IQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + DL+ I L A P+ +K + ++G I G Sbjct: 279 PHHDI-YSIEDLAQLIYALKEATHYEKPVSVKIAAVHNVAAIASGIARAGADIIYIDGFR 337 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGV 271 G + + RD GIP L++ A N +A+GG+R+ Sbjct: 338 GGTGAAPTVIRDH----------IGIPIELAIAAVDDRLRAEGIRNSVSIVAAGGIRHSG 387 Query: 272 DILKSIILGASLGGLASPFLKP------------------AMDSSD------------AV 301 D+ K+I LGA + + L A + + Sbjct: 388 DVAKAIALGADAVAIGTAALIAMGCHVCQMCHTGNCSWGIATQRPELTQRLDPDWAAQQL 447 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + ++S E + LG ++ L + +R Sbjct: 448 INLVKSWSLELKEILGALGLNAIESLRGSRERLRG 482 >gi|150399838|ref|YP_001323605.1| glutamate synthase (NADPH) [Methanococcus vannielii SB] gi|150012541|gb|ABR54993.1| Glutamate synthase (NADPH) [Methanococcus vannielii SB] Length = 510 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 95/336 (28%), Gaps = 65/336 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 KL P++I M+ G + I +A A ++ K M G S + Sbjct: 171 NLKLDTPIMIGHMSYGALSLNSHI--AMAKAVKECKTFMGTG--EGGLHRDLYPYSDSVI 226 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAV---------HVLGADGLFLHLNP-LQEIIQ 161 N + ++ + A+ + P + I Sbjct: 227 TQVASGRFGVNSEYLNKGAAIEIKIGQGGKPGIGGHLPGEKVSAEVSMTRMIPEGSDAIS 286 Query: 162 PNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 P + + + L+ S +P+ +K + S I G Sbjct: 287 PAPHHDIYSIEDLAQLIRSLKEATRWKIPVFVKVSAVHNIAAIANGIATSDADAVVIDGF 346 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + S + RD + GIP +++ + N IASGG+R Sbjct: 347 KGGTGSAPKVFRD----------NVGIPIEVAISAVDNRLKEQGKRNNLSIIASGGIRTS 396 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D+ K+I LGA + + + D + Sbjct: 397 ADVFKAIALGADAVYIGTAAMVALGCTVCGRCYSGQCAWGIATQKQELVNRLEVDDGARR 456 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E + G ++ L N +R Sbjct: 457 VSNLINAWTHEIKELLGAAGINTIESLRGNRDRLRG 492 >gi|330879004|gb|EGH13153.1| L-lactate dehydrogenase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 149 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 22/156 (14%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 S + + + L++K + L+ D + G ++ GG R L+ Sbjct: 1 SHVVKIRARWRGALIIKGI---LNPKDAKTAQAIGADGIIVSNHGG---------RQLDG 48 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I + L + G+R G D++K++ LGA + PF Sbjct: 49 SIAPLLI---------LPRIIEAAPNLVVMLDSGIRRGTDVMKAMALGAKAVFVGRPFNY 99 Query: 293 PA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + V AI+ + E + LLG +EL Sbjct: 100 AAVVAGEHGVSHAIKLICDELKRDLGLLGVPSSREL 135 >gi|260432679|ref|ZP_05786650.1| (S)-mandelate dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260416507|gb|EEX09766.1| (S)-mandelate dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 370 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 95/358 (26%), Gaps = 66/358 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G R + D L R L + G+ P I+ M G N Sbjct: 32 AGSEAGARRTRAALDAMTLRPRIL--RDVSSRSLAARVFGQPADRPFGIAPM-GMCNLSA 88 Query: 73 ERINRNLAIAAEKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A + V + V + + + F+L ++ L Sbjct: 89 PGADLMLARLAAQYGVPLGVSTVASTPMEALIEEARGHAWFQL-YFSGDGSGTFKLVDRA 147 Query: 124 ---GAVQLNYDFGVQKAHQAVHVL-------------GADGLFLH--------------- 152 G L V + + L LH Sbjct: 148 KAAGYKTLILTVDVPEVGRRPRELRHGFRMPFRIGPRQFLDFALHPRWSISTLLQGKPQM 207 Query: 153 LNPLQEIIQ-PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 N L E + +A L L++K V L D +G+ Sbjct: 208 ANFLMEGFAFDRTESRAKADWDTLARLRDRWPGKLVVKGV---LDVEDAVALQAAGVDAI 264 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 ++ G + + I ++ GLR+G Sbjct: 265 QVSSHGARQLESAPAPISVLPQI-----------------RAAVGDDYPLFYDSGLRSGE 307 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELY 328 D LK+++ GA +A + E L +E ++M +G ++ + Sbjct: 308 DALKALMAGADFLFFGRVLQFAIAAGGEAGLHRLWEVLSEEMDIAMAQIGVTSLRGVR 365 >gi|282933595|ref|ZP_06338965.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 208-1] gi|297205387|ref|ZP_06922783.1| glycolate oxidase [Lactobacillus jensenii JV-V16] gi|281302338|gb|EFA94570.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 208-1] gi|297149965|gb|EFH30262.1| glycolate oxidase [Lactobacillus jensenii JV-V16] Length = 335 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 100/315 (31%), Gaps = 44/315 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ R I + D + EF GKK + P+ +++++ N Sbjct: 42 ADDANVHNRNYLDNILAEMRI---IDAVKPDLTTEFFGKKYASPINLAAVSHLNKVLPDK 98 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNY 130 + + AA+ + +G + S +R P + ++ Sbjct: 99 RRKPMQEKVQAAKNQNLLNWIGMESNHDYAEIVKNSGDTVRIVKPFAEHEDIINELRFAQ 158 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQE--IIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 D G + H+ P ++ +G S + + ++P + Sbjct: 159 DLGAVAVGMDID---------HV-PGEDGKYDVVDGINLGPISFSDLRRYAHTTNLPFVA 208 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K V LS D +G ++ G +G+P Sbjct: 209 KGV---LSVQDALKAKDAGASAIVVSHHHGR-------------------LPFGVPPLKM 246 Query: 249 LEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAI 305 L + ++ G L G D+ K++ +GA + L + +A A I Sbjct: 247 LPAIKEALADSDMTIFVDGSLMTGYDVYKAMAMGADGVLVGRAILSELLKSGQEATEAKI 306 Query: 306 ESLRKEFIVSMFLLG 320 + L ++ M G Sbjct: 307 KLLNEQLSQMMLYTG 321 >gi|18976577|ref|NP_577934.1| glutamate synthase subunit alpha [Pyrococcus furiosus DSM 3638] gi|18892138|gb|AAL80329.1| glutamate synthase subunit alpha [Pyrococcus furiosus DSM 3638] Length = 502 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 114/356 (32%), Gaps = 75/356 (21%) Query: 38 EISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--- 93 E+ + ++ E ++ P++ + M+ G + +A+AA++ + G Sbjct: 147 EVDLENIEIKTEIPPNIEIEVPIMFAGMSYGALSYNAFL--AIAMAAKEFGTMFSTGEGG 204 Query: 94 -------SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAV 141 A F + ++ + Q + +K + + Sbjct: 205 LPRELRRKYGDHAIVQVASGRFGVDPDYLNSAAAIEIKIGQGAKPGIGGHLPGEKVTEGI 264 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK---IALLSSAMDV--PLLLKEVGCGLS 196 + P + I P + + + I + A + P+ +K Sbjct: 265 ARTRM------IPPGTDAISPAPHHDIYSIEDLATLIHAIKEATNYEKPVFVKVAAVHNI 318 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA---- 252 + ++G I G G + + + RD + GIP L+L Sbjct: 319 AAIASGIARAGADAIVIDGFRGGTGAAPKRIRD----------NVGIPIELALASVDRRL 368 Query: 253 --RPYCNEAQFIASGGLRNGVDILKSIILGASLG--GLAS-------------------- 288 N I SGG+RN D++K+I LGA G A+ Sbjct: 369 REEGIRNRVSLIVSGGIRNAADVVKAIALGADAVYIGTAALIAIGCTMCQKCYTGKCPWG 428 Query: 289 -----PFLKPAMDSSDA---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P L +D ++A ++ +++ E + +G ++ L N +R Sbjct: 429 ITTQDPILSRRLDPNEASKRLINLLKAWSLEIKEMLGAMGINAIESLRGNREHLRG 484 >gi|71021325|ref|XP_760893.1| hypothetical protein UM04746.1 [Ustilago maydis 521] gi|46100989|gb|EAK86222.1| hypothetical protein UM04746.1 [Ustilago maydis 521] Length = 451 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 74/265 (27%), Gaps = 57/265 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG----- 67 + + N F R L +VD S LG+K + P+ I++ G Sbjct: 133 ADDEVTMRENTSAFGRIWFRPRIL--RDVSKVDYSTSLLGQKSTLPIYITATALGKLGHP 190 Query: 68 -NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 K + I +A + V +++ F + + N+ Sbjct: 191 EGEKNLTVAAGKEGIIQMIPTLASCSFDEIVGARINDSQVQFLQLYVNSNRKVTENI--- 247 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-------------------- 166 +A G GLF+ ++ Q + Sbjct: 248 ----------IQKA-EAAGVKGLFVTVDAPQLGRREKDMRMKFDDVGSDHQNKNKDNVDR 296 Query: 167 ------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + + + L S +P++LK V + D + G+ ++ Sbjct: 297 SQGAARAISSFIDPSLSWDDLTWLRSVTKMPIVLKGVQ---TWEDAVRAAELGLSGVVLS 353 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQ 239 GG S ++ ++ + Sbjct: 354 NHGGRQLDFARSGIEVLGEVVEALK 378 >gi|332295738|ref|YP_004437661.1| Glutamate synthase (NADPH) [Thermodesulfobium narugense DSM 14796] gi|332178841|gb|AEE14530.1| Glutamate synthase (NADPH) [Thermodesulfobium narugense DSM 14796] Length = 504 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 111/359 (30%), Gaps = 85/359 (23%) Query: 44 VDPSVEF------------LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA 91 +D S+EF KL+ P++ ++M+ G + + LA AA + + M Sbjct: 145 IDISIEFRDNKYVLKDKLKPNIKLNSPIIFAAMSYGAISLNAH--KALAKAARECGILMN 202 Query: 92 VGSQRVMFSDHNAIKS---------------FELRQYAPHTVL--ISNLGAVQLNYDFGV 134 G + + + + R A + + G + V Sbjct: 203 TGEGGLHRDLYEYSDNIIVQVASGRFGVSPEYLKRSAAIEIKVGQGAKPGIGGHLPGYKV 262 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVG 192 + ++ L P +I DL+ IA L A D P+ +K Sbjct: 263 DDEVSSTRMIPKGTDALSPAPHHDIYSIE------DLAQLIASLKEATDYSKPVGVKIAA 316 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 + ++ Y I G G + + RD GIP L++ Sbjct: 317 VHNIAAIASGVARADADYIVIDGFRGGTGAAPTMIRDH----------IGIPIELAIAAV 366 Query: 253 ------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------------ 294 N+ +A+GG+R+ D+ K++ LGA + + L Sbjct: 367 DDRLRKEKIRNKVSIVAAGGIRHAADMAKALALGADFVTIGTVALIAMGCTLCQKCYTGN 426 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 ++S +V I E M LG ++ L N +R Sbjct: 427 CSWGIATQRPDLVERLNPDEASKKLVNLIRGWSLELKEIMGALGINAIESLVGNRERLR 485 >gi|170076894|ref|YP_001733532.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. PCC 7002] gi|169884563|gb|ACA98276.1| IMP dehydrogenase family protein [Synechococcus sp. PCC 7002] Length = 387 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 118/379 (31%), Gaps = 97/379 (25%) Query: 25 FFDDWHLIH--RAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTG--------------- 66 FD+ L+ R L PE++ D S+E G KL+ P+L S+M G Sbjct: 16 GFDEIALVPGGRTLDPELA----DTSLEIGGIKLNIPILASAMDGVVDVKMAALLSDLGA 71 Query: 67 -------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 G E N L A K VG + ++S + + R + Sbjct: 72 MGVLNLEGLQTRYEDPNPVLDRIAAVDKTEF-VGLMQELYSKPIQPELIQKRIQE---IK 127 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS-KIALL 178 N A G K + V GAD LF+ Q + + + + + L Sbjct: 128 AQNGLAAVSLTPVGATKYGKIVADAGADILFI-----QATVVSTSHLSPEGIVPLNLHKL 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S + +P++L G ++ +++G + G + + Sbjct: 183 CSELPIPVVL---GNCVTYDAALELMRAGAAAVLVGIGPGAACT------------SRGV 227 Query: 239 QDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P ++ ++ IA GG+ G DI K I GA + SP Sbjct: 228 LGVGVPQATAVADCSAARDDYEKESGRYVPIIADGGIVTGGDICKCIASGADAVMIGSPI 287 Query: 291 LKPA-----------------------------------MDSSDAVVAAIESLRKEFIVS 315 + A M + +L S Sbjct: 288 ARAAEAPGRGFHWGMATPSPVLPRGTRINVGTTGTITQIMTGPAKLDDGTHNLLGALKTS 347 Query: 316 MFLLGTKRVQELYLNTALI 334 M LG K ++E+ +I Sbjct: 348 MGTLGAKNIKEMQQVEVVI 366 >gi|254229217|ref|ZP_04922636.1| Glutamate synthase domain 2 [Vibrio sp. Ex25] gi|151938302|gb|EDN57141.1| Glutamate synthase domain 2 [Vibrio sp. Ex25] Length = 513 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 110/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E +G KL+ PLL+S M+ G +I LA AE + G Sbjct: 159 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 216 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A S + A + N+ A G + A + Sbjct: 217 -EGGMLPEEQAANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNV 275 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 276 GKISQVRGIPEGQPAISPPTFKDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 332 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L +G Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 333 DIQFALDAGADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 383 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|241729218|ref|XP_002413801.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215507617|gb|EEC17109.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 157 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 13/127 (10%) Query: 220 SWSRIESHRDLESDIGIVFQD----WGIPTPLSLEM----ARPYCNEAQFIASGGLRNGV 271 S + R S+ VF WG+ ++E+ R + GG+R G Sbjct: 6 SVAAPMWSRRWHSEPKAVFVGRPAFWGL--AYNIEVLPEVVRAVRGRVEVYVDGGVRRGT 63 Query: 272 DILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D++K++ LGA + P F A + V + LR+E ++ L+G + +L Sbjct: 64 DVVKALALGAKAVFVGRPVFWGLAYNGEAGVRQTLSILREEVDRALALMGCSSIDQL--V 121 Query: 331 TALIRHQ 337 ++ HQ Sbjct: 122 PEMVVHQ 128 >gi|262204341|ref|YP_003275549.1| lactate 2-monooxygenase [Gordonia bronchialis DSM 43247] gi|262087688|gb|ACY23656.1| Lactate 2-monooxygenase [Gordonia bronchialis DSM 43247] Length = 426 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 60/157 (38%), Gaps = 23/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + +P+LLK V L D + +G+ ++ GG Sbjct: 282 WTDVEGLRARTSLPILLKGV---LHPDDARRAVDAGVDGIVVSNHGGRQIDGS------- 331 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASP- 289 I + +L+ P + + + G+ G D+ K++ LGA + P Sbjct: 332 -----------ISSIDALDAIAPVVDGRIKVLIDSGIYTGADVFKALALGADAACIGRPH 380 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D A+ ++ E +++ L G RV + Sbjct: 381 MYGLALAGADGARDAVANIIAELDLTLGLAGYTRVAD 417 >gi|238855881|ref|ZP_04646170.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 269-3] gi|282933372|ref|ZP_06338755.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 208-1] gi|238831544|gb|EEQ23892.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 269-3] gi|281302557|gb|EFA94776.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 208-1] Length = 336 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 101/321 (31%), Gaps = 50/321 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R I + D + EF GKK + P+ +++++ N Sbjct: 42 ADDANVHNRNYLDNILVEMRI---IDAVKPDLTTEFFGKKYASPINLAAVSHLNKVLPDK 98 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + AA+ + M ++ ++ +A H +I+ L Q Sbjct: 99 SRKPMQEKVQAAKSQNVLNWIGMESNQDYAEIVKNSGDTVRIVKPFAEHEDIINELRFAQ 158 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE--IIQPNGNTNFADLSSKIALLSSAMDVP 185 D G + H+ P ++ +G S + + ++P Sbjct: 159 ---DLGAVAVGMDID---------HV-PGEDGKYDVVDGINLGPVTFSDLRRYAHTTNLP 205 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + K V LS D +G ++ G +G+P Sbjct: 206 FVAKGV---LSVQDALKARDAGASAIVVSHHHGR-------------------LPFGVPP 243 Query: 246 PLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVV 302 L + + G L G D+ K++ +GA + L + A Sbjct: 244 LKMLPAIKDALADSNMTIFVDGSLMTGYDVYKAMAMGADGVLVGRAILSELLQAGQKATE 303 Query: 303 AAIESLRKEFIVSMFLLGTKR 323 I+ L ++ M G Sbjct: 304 EKIKLLNEQLSQMMLYTGITD 324 >gi|119871661|ref|YP_929668.1| ferredoxin-dependent glutamate synthase [Pyrobaculum islandicum DSM 4184] gi|119673069|gb|ABL87325.1| ferredoxin-dependent glutamate synthase [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 16/150 (10%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K ++ IE+ + G I G+ GGT + + +D Sbjct: 288 KAKIWIKLGPFRDAAEVIEVASREGADAVVIDGKEGGTGMAPT-----------VALKDL 336 Query: 242 GIPTPLSLE---MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DS 297 G PT + L+ AR + + +G L NG ++K++ LGA+ +A PFL A+ Sbjct: 337 GYPTVVGLKYIKAAREAGVKTSLLIAGRLYNGGHVVKAVALGATAVYMARPFLIAALTKG 396 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V IESL+ E +++ LG V++L Sbjct: 397 EEGVSKYIESLKLEIQMAVSALGKYDVRDL 426 >gi|48478535|ref|YP_024241.1| glutamate synthase [NADPH] large chain fragment II [Picrophilus torridus DSM 9790] gi|48431183|gb|AAT44048.1| glutamate synthase [NADPH] large chain fragment II [Picrophilus torridus DSM 9790] Length = 680 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 121/382 (31%), Gaps = 70/382 (18%) Query: 7 IDHIN-IVCKDPGID-----RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL 60 IDHI + + + D I+ D + E G K+S PL Sbjct: 23 IDHIRRLSMTGEPYEIFVNNSGNRILDRISFNVNDRT-INDDYGNTETELAGLKMSVPLY 81 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG----------SQRVMFSDHNAIKSFEL 110 + M+ G + N +A AAEKT+ G +R+ +A L Sbjct: 82 LGDMSYGA--LSGNPNIAIANAAEKTETMAGTGEGGLLPELYDKKRIFVQWASARFGVTL 139 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + ++ +G G+ + V G + + I P + + Sbjct: 140 DTLNRGSAVVIKIGQGAKP---GIGGHLPGIKVTGPISTTRKIPEGLDAISPAPHHDIYS 196 Query: 171 LSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +I L A P+ +K +SG I G G + + Sbjct: 197 IEDIAQRIESLKIATKKPVFVKVAATNYIPYIAAGIARSGGDGIIIDGHGAGTGATPLVI 256 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNGVDILKSIILGA 281 R+ ++GIP L++ A + + IA+G + N D K + LGA Sbjct: 257 RN----------NFGIPVELAVASAHKMLLKDGNRRKFKIIAAGRVSNSTDAAKLMALGA 306 Query: 282 SLGGLASPFLKPA-----------------------------MDSSDAVVAAIESLRKEF 312 + + + L +D ++ I KE Sbjct: 307 DVVSMGTGVLIAMGCIMVKKCNLGFCPVALTSKIDGKRVFDESYGTDNLIRFINGFTKEL 366 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 + + LG + +++L + L+ Sbjct: 367 SLIVKRLGLRSIRDLTGRSDLL 388 >gi|255949920|ref|XP_002565727.1| Pc22g18220 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592744|emb|CAP99110.1| Pc22g18220 [Penicillium chrysogenum Wisconsin 54-1255] Length = 393 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 92/358 (25%), Gaps = 81/358 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-L 79 N++ F LI L I + +S P+ + + G NK+ + Sbjct: 7 ANRQAFYRHRLIPNQL--IDTNNRSTKTTIFNHSVSAPIGFAPI--GINKIYSPAGEAAV 62 Query: 80 AIAAEKTKVAMAV---GSQRVM-------------------------------------- 98 + A + + + GS + Sbjct: 63 SKVASELNLPYCLSTAGSTSIEKVASANGTGTRFFQLYMPHDDEVTVSLLTRAWENGFDA 122 Query: 99 --FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD--GLFLHLN 154 + + A + V + + D + Sbjct: 123 LILTTDTWQLGWRHDDVASSNYAFYRGFGADVGLSDPVFRRRCVTDGIDPDIDVVAASTK 182 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIR 209 + + A KI L P ++K + S D +K G+ Sbjct: 183 WIDSVWHGR-----AWSWEKIPWLMETWRGISGGRPFVIKGIQ---SVSDARRCVKLGVE 234 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + D I ++ + G+R Sbjct: 235 GIVVSNHAGRQVDGAVASLDALERIAE-----------------AVGDKIYVMFDSGVRG 277 Query: 270 GVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 D++K++ LGA + ++ D V ++SL + + M + G V++ Sbjct: 278 ASDVVKALALGARFVFIGRLWIWGLSIQGEDGVRHVMKSLLADLDILMGVAGFNGVED 335 >gi|218195617|gb|EEC78044.1| hypothetical protein OsI_17480 [Oryza sativa Indica Group] Length = 285 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 93/324 (28%), Gaps = 83/324 (25%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F L + +D S+ LG +S P+ Sbjct: 30 AEDQWTLRENSEAFSRILFQPVVL--VDVSCIDMSMSVLGYNISMPI------------- 74 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 M + + + A T++I + Sbjct: 75 -----------------MIAPTALHKLAHPEGELATARAAAAAETIMIYKDRNL------ 111 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP--LLLKE 190 VQ+ Q G + L ++ L + A + + +P ++LK Sbjct: 112 -VQQLIQRAEKAGYKAIVLTVDA-------------PWLGRREADVKNRFTLPQNVMLK- 156 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 D T+ S + ++ + D W + Sbjct: 157 ----------------IFEGLDQGKIDETNGSGLAAYVASQIDRSF---SW--------K 189 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLR 309 + R G R G D+ K++ LGAS + P L A+D V A+ LR Sbjct: 190 VVREANGRVPVFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLR 249 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 E ++M L G V+E+ + Sbjct: 250 DELEITMALSGCTSVKEITRGHVV 273 >gi|83951543|ref|ZP_00960275.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius nubinhibens ISM] gi|83836549|gb|EAP75846.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Roseovarius nubinhibens ISM] Length = 378 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 100/363 (27%), Gaps = 70/363 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G R + D L R L ++S +V GK+ P I+ M G N Sbjct: 35 AGRETGAGRTRDALDRMELCPRILRDVSAR--SLAVPLFGKEAGAPFGIAPM-GMCNLSG 91 Query: 73 ERINRNLAIAAEKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + LA A + V + V + M F+L ++ V+ Sbjct: 92 PGADLMLARLAARENVPLGVSTVASTPMEEMIETAQGNAWFQL-YFSGDGS--GTFKLVE 148 Query: 128 LNYDFGVQKAHQAVHVLGA----------------------DGLFLH------------- 152 D G + V V LH Sbjct: 149 RARDAGYETIVLTVDVPEVGRRPRELRHGFTMPFRIGPKQFIDFALHPRWSLTTLLKGRP 208 Query: 153 --LNPLQE-IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR 209 N L++ + + L L++K V L D + +SG+ Sbjct: 209 DMANFLRDGYTFDRTESRARATWDTLDRLRDMWPGKLVVKGV---LDIEDAQRLARSGVD 265 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + + + GLR+ Sbjct: 266 AIQVSSHGARQLESSPCPFSQLAPMRAALGE-----------------SMPIFYDTGLRS 308 Query: 270 GVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D++K GA+ L A + + +L+ E +++ +G + EL Sbjct: 309 GEDVVKCYASGANFTFLGRILQFAIAAGGEEGLNRLWATLKSETSITLAQIGQCSLAELQ 368 Query: 329 LNT 331 Sbjct: 369 KEK 371 >gi|159045025|ref|YP_001533819.1| cytochrome containing L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] gi|157912785|gb|ABV94218.1| cytochrome containing L-lactate dehydrogenase [Dinoroseobacter shibae DFL 12] Length = 389 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 98/365 (26%), Gaps = 76/365 (20%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--MTG------ 66 ++ G+ + D HL+ L E LG+ + P I+ M+G Sbjct: 36 REIGVQTTRAALDAIHLLPGILHGQITPE--LETPLLGQTYARPFGIAPVGMSGLIWPDA 93 Query: 67 ----GNNKMIERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 RI L+ A +T +V G A +R Sbjct: 94 ERLLAAEAATARIPYGLSTVATQTPERVGPVAGEMGWFQLYPPADPG--IRDDIMARARA 151 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLG---------------------ADGLFLHLNP---- 155 S G + L D + A G+ H P Sbjct: 152 SGFGTLVLTVDVPADSRRERQRRANLTIPPKITPRMIFQMILHPTWALGMARHGTPSLKL 211 Query: 156 --------LQEIIQPNGNTNFADLSSK--IALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + D PL++K V L D Sbjct: 212 AESYVEKTGAASYMAHAGKAIRGAPDWAYLDAVRAGWDGPLVVKGV---LRPEDAVRLRA 268 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G+ ++ + I R + I Sbjct: 269 AGVDAIWVSDHSARQFEGGPGAITQLPAI-----------------RRAVGPDCPVIYDS 311 Query: 266 GLRNGVDILKSIILGASLG--GLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 G+ G+DIL+++ LGA G A F A V I L ++ + +M + G + Sbjct: 312 GIEGGLDILRAVGLGADFVMLGRAWHF-ALAGLGPAGVRHLIHILTQDLVTNMQICGIAK 370 Query: 324 VQELY 328 + + Sbjct: 371 LADFR 375 >gi|189346746|ref|YP_001943275.1| ferredoxin-dependent glutamate synthase [Chlorobium limicola DSM 245] gi|189340893|gb|ACD90296.1| ferredoxin-dependent glutamate synthase [Chlorobium limicola DSM 245] Length = 545 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 42/264 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 LS P+ ++ M+ G +I LA AE +A G + M D S + Sbjct: 207 LTLSIPVFVTDMSFGALSREAKI--ALAKGAEMAGTGIASG-EGGMLEDERRENSRYFYE 263 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT------ 166 AP N+ V+ F + A +G G+ QEI G Sbjct: 264 LAPAKFGW-NIDKVKRCQAFHFKAGQAAKTGIG--GILPGAKVSQEIADTRGLRPYEEAV 320 Query: 167 ------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +F DLS +I + +P+ K + DI+ L +G Y + Sbjct: 321 SPSRFPDLYTPEDFRDLSEEIREATG--GIPIGFKMSAQHIER-DIDFALDAGADYIILD 377 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRN 269 GRGG + + D+ GIPT +L AR + + + +GGLR Sbjct: 378 GRGGGTGAS--------PDLLKYHT--GIPTIPALARARAHLDRCGAASVSLVITGGLRT 427 Query: 270 GVDILKSIILGASLGGLASPFLKP 293 D LK++ LGA + + ++ Sbjct: 428 ETDYLKALALGADAIAIGNAAIQA 451 >gi|288932026|ref|YP_003436086.1| ferredoxin-dependent glutamate synthase [Ferroglobus placidus DSM 10642] gi|288894274|gb|ADC65811.1| ferredoxin-dependent glutamate synthase [Ferroglobus placidus DSM 10642] Length = 479 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 99/328 (30%), Gaps = 64/328 (19%) Query: 55 LSFPLLISSMTGGN----NKMIERINRNLAIAAEKTKVAMAVGSQRVMFS-----DHNAI 105 L P+++++M+ G K+ I +A A T +R + Sbjct: 141 LETPIMVAAMSFGAISLEAKVAIAIGTAMAGTATNTGEGGMHPEERKHAKLLIAQYASGR 200 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + + +G G + + + + P + + P + Sbjct: 201 FGVSAKYLNDADGIEIKIGQGAKAGMGGHLLGEKVTEEI---AMIRGIPPGTDALSPARH 257 Query: 166 TNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + + +P+ +K G + D+++ K+G + G G + Sbjct: 258 MDIIGPEDLAMKIEQLREITDWRIPIAVKYSA-GRVADDVKIAAKAGADIIVVDGMQGGT 316 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFIASGGLRNGVDIL 274 + + + GIPT ++ A ++ +A+GG+R G D+ Sbjct: 317 GATPDVVANHA----------GIPTIAAIVQADQALREIGLRDKVSLVAAGGIRTGADVA 366 Query: 275 KSIILGASLGGLASPFLKPA------------------------------MDSSDAVVAA 304 K++ LGA + + L V Sbjct: 367 KALALGADAVQIGTGALIALGCTVCRQCHIGKCPKGIATQDPKLRRRLDPQKGGIRVYNY 426 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTA 332 I+++ +E + G V+ L + Sbjct: 427 IKAMTEELKILTQQAGKTDVRNLEMEDL 454 >gi|303244116|ref|ZP_07330454.1| Glutamate synthase (NADPH) [Methanothermococcus okinawensis IH1] gi|302485501|gb|EFL48427.1| Glutamate synthase (NADPH) [Methanothermococcus okinawensis IH1] Length = 510 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 107/339 (31%), Gaps = 71/339 (20%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDH 102 KL P++I+ M+ G + + +A A ++ M G Sbjct: 171 NLKLETPIMIAHMSYGALSLNAH--KAMAKAVKECGTYMGTGEGGLHRALYPYADHIITQ 228 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQE 158 A F + + +S A+++ G + H + A+ + P + Sbjct: 229 IASGRFGVNEEY-----LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPEGSD 283 Query: 159 IIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + + L+ S VP+ +K + S I Sbjct: 284 AISPAPHHDIYSIEDLAQLVRSLKEATRWKVPVFVKIAAVHNVAAIANGIATSDADAVVI 343 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGL 267 G G + + + RD + GIP +++ NE IASGG+ Sbjct: 344 DGFKGGTGAAPKVFRD----------NVGIPIEMAIAAVDKRLREEGVRNEISIIASGGI 393 Query: 268 RNGVDILKSIILGASLG-------------------------GLA--SPFLKPAMDSSDA 300 RN D+ KSI LGA G+A P L +D +A Sbjct: 394 RNSADVFKSIALGADAVYIGTAVMIAMGCRVCGRCYTGQCAWGIATQKPELVKRLDVEEA 453 Query: 301 ---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E + G ++ L N +R Sbjct: 454 SKRVANLINAWTLEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|56696065|ref|YP_166419.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56677802|gb|AAV94468.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 371 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 23/160 (14%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A L A P ++K V L D E + G+ ++ G + ++ I Sbjct: 230 VAWLRDAWQGPFVVKGV---LRPEDGERMERLGVDALWVSNHAGRQFDGAPGAAEMLPHI 286 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-LKP 293 I G+ +G+DIL+++ LGA L F Sbjct: 287 -------------------RAATRLPLIFDSGVESGLDILRALALGADFVMLGRAFHFGL 327 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A AI+ L+K+ ++ LG R+ +L L Sbjct: 328 AALGPRGAAHAIDILQKDIESNLGQLGAARLTDLPPTRPL 367 >gi|260665017|ref|ZP_05865867.1| glycolate oxidase [Lactobacillus jensenii SJ-7A-US] gi|313472849|ref|ZP_07813337.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 1153] gi|239528964|gb|EEQ67965.1| (S)-2-hydroxy-acid oxidase [Lactobacillus jensenii 1153] gi|260561071|gb|EEX27045.1| glycolate oxidase [Lactobacillus jensenii SJ-7A-US] Length = 303 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 101/321 (31%), Gaps = 50/321 (15%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ + R I + D + EF GKK + P+ +++++ N Sbjct: 9 ADDANVHNRNYLDNILVEMRI---IDAVKPDLTTEFFGKKYASPINLAAVSHLNKVLPDK 65 Query: 72 IERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + AA+ + M ++ ++ +A H +I+ L Q Sbjct: 66 SRKPMQEKVQAAKSQNVLNWIGMESNQDYAEIVKNSGDTVRIVKPFAEHEDIINELRFAQ 125 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE--IIQPNGNTNFADLSSKIALLSSAMDVP 185 D G + H+ P ++ +G S + + ++P Sbjct: 126 ---DLGAVAVGMDID---------HV-PGEDGKYDVVDGINLGPVTFSDLRRYAHTTNLP 172 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + K V LS D +G ++ G +G+P Sbjct: 173 FVAKGV---LSVQDALKARDAGASAIVVSHHHGR-------------------LPFGVPP 210 Query: 246 PLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVV 302 L + + G L G D+ K++ +GA + L + A Sbjct: 211 LKMLPAIKDALADSNMTIFVDGSLMTGYDVYKAMAMGADGVLVGRAILSELLQAGQKATE 270 Query: 303 AAIESLRKEFIVSMFLLGTKR 323 I+ L ++ M G Sbjct: 271 EKIKLLNEQLSQMMLYTGITD 291 >gi|266622328|ref|ZP_06115263.1| glutamate synthase domain protein [Clostridium hathewayi DSM 13479] gi|288865950|gb|EFC98248.1| glutamate synthase domain protein [Clostridium hathewayi DSM 13479] Length = 462 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 41/296 (13%) Query: 25 FFDDWHLIHRAL---PEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD ++ L P + D V + GK L P+ IS M+ G M + + Sbjct: 98 GWDDILILGAQLNPPPLMEHDPVTITTVI-GKHAKKPMVLDGPVYISHMSFGA--MSKEM 154 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH--TVLISNLG---AVQLNY 130 LA + AM G ++ + +A + + +Y P+ +V NL A+++ Sbjct: 155 KVALAKGSAMAGTAMCSGEGGILPEEKSAAYKY-IFEYVPNRYSVTPDNLRESDAIEIKI 213 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPLQE-IIQP---NGNTNFADLSSKIALLSSAMD 183 G + H + + + PL E +I P + DL +A L A + Sbjct: 214 GQGTKPGMGGHLPGAKVTPEIAAIRNKPLGEDVISPSKFEDIRSKEDLRDLVAQLRMASE 273 Query: 184 V-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P+ +K + G D+E + + + I GRGG + + + RD S Sbjct: 274 GRPIGIK-IAAGKIEKDLEYCVFAEPDFITIDGRGGATGASPKLVRDSTS---------- 322 Query: 243 IPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +PT +L AR Y + + + +GGLR D K+I +GA +AS L A Sbjct: 323 VPTVYALSRARKYLDEAGADIDLVITGGLRVSSDFAKAIAMGADAVAIASAGLIAA 378 >gi|149195878|ref|ZP_01872935.1| L-lactate dehydrogenase [Lentisphaera araneosa HTCC2155] gi|149141340|gb|EDM29736.1| L-lactate dehydrogenase [Lentisphaera araneosa HTCC2155] Length = 379 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 165 NTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N F+ +KI L L++K + ++ D + G+ ++ GG Sbjct: 227 NKTFSGRLTEAKIKPLRDKWKGNLVIKGI---VNEEDANKAIALGVDGMIVSNHGGRQLD 283 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 ES + + + + + GG+R+GVDI ++ GA Sbjct: 284 SGESTIKPLNKLAKALKG-----------------KTTLLMDGGIRSGVDIASTVASGAD 326 Query: 283 LGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L P + A++ L+++ M +G +RV++L Sbjct: 327 FTFLGRAPMFGACAMGAKGGDQALQILKRQLQQVMEQVGCERVEDL 372 >gi|256851765|ref|ZP_05557153.1| glycolate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260661518|ref|ZP_05862430.1| glycolate oxidase [Lactobacillus jensenii 115-3-CHN] gi|256615723|gb|EEU20912.1| glycolate oxidase [Lactobacillus jensenii 27-2-CHN] gi|260547575|gb|EEX23553.1| glycolate oxidase [Lactobacillus jensenii 115-3-CHN] Length = 302 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 100/315 (31%), Gaps = 44/315 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGN---NKM 71 D N+ + D+ R I + D + EF GKK + P+ +++++ N Sbjct: 9 ADDANVHNRNYLDNILAEMRI---IDAVKPDLTTEFFGKKYASPINLAAVSHLNKVLPDK 65 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNY 130 + + AA+ + +G + S +R P + ++ Sbjct: 66 RRKPMQEKVQAAKNQNLLNWIGMESNHDYAEIVKNSGDTVRIVKPFAEHEDIINELRFAQ 125 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQE--IIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 D G + H+ P ++ +G S + + ++P + Sbjct: 126 DLGAVAVGMDID---------HV-PGEDGKYDVVDGINLGPISFSDLRRYAHTTNLPFVA 175 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K V LS D +G ++ G +G+P Sbjct: 176 KGV---LSVQDALKAKDAGASAIVVSHHHGR-------------------LPFGVPPLKM 213 Query: 249 LEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAI 305 L + ++ G L G D+ K++ +GA + L + +A A I Sbjct: 214 LPAIKEALADSDMTIFVDGSLMTGYDVYKAMAMGADGVLVGRAILSELLKSGQEATEAKI 273 Query: 306 ESLRKEFIVSMFLLG 320 + L ++ M G Sbjct: 274 KLLNEQLSQMMLYTG 288 >gi|297562290|ref|YP_003681264.1| lactate 2-monooxygenase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846738|gb|ADH68758.1| Lactate 2-monooxygenase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 387 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 22/164 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 IA + D+P+L+K + G + + +G+ ++ GG + D Sbjct: 245 DNIARIRRWTDLPVLVKGIVRG---DEAADLVAAGVDGIVVSNHGGRQVDNAVAALDALP 301 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 ++ + A + G+R+G D+ ++ LGA L P++ Sbjct: 302 EV-----------------VDAVGDRAAVLFDSGVRSGADVAVAMALGAEAVLLGRPWVY 344 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+ + V + + E ++ L+G K ++L + + R Sbjct: 345 GLAVGGAAGVEHVLRATLAELQITAELMG-KDAKDLDGSDVVRR 387 >gi|51892068|ref|YP_074759.1| glutamate synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855757|dbj|BAD39915.1| glutamate synthetase [Symbiobacterium thermophilum IAM 14863] Length = 481 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 111/301 (36%), Gaps = 41/301 (13%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGK-----KLSFPLLISSMT-GGNNKMIERINRN 78 F+ HL PE + +D +V + ++ P+LI+ M+ GG +I Sbjct: 78 LFNPVHLCRFPTPE-NVP-IDTAVTIGPRARRPLTVAIPVLIAGMSFGGALSKRAKI--A 133 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL-----ISNLGAVQLNYDFG 133 LA AA A G + + + A + QY L + A+++ G Sbjct: 134 LARAATAVGTATNTG-EAPLLEEERAAARLLIGQYNRGGWLNRPEQYRRVDAIEIQPGQG 192 Query: 134 VQKA---HQAVHVLGADG-LFLHLNPLQEIIQPNGNT---NFADLSSKIALLSSAMDVPL 186 Q + + +G D L P Q+ + + + AD + L + VP+ Sbjct: 193 AQGSTPQRTSARNIGPDFRAAFGLEPGQDAVIHSRLPGVNSQADFIRLVRRLRAETGVPV 252 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K ++ + L++G+ + + G GGT + D G+PT Sbjct: 253 GVKLAATHHLERELAVALEAGVDFVTVDGAEGGTHGGAP-----------TLQDDVGLPT 301 Query: 246 PLSLEMARP------YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 ++ AR + IA+GGL +LK++ LGA + L + Sbjct: 302 LYAVARARDFLVRQKAAGDVSLIAAGGLITPGQMLKAMALGADAVYTGTAALMTLIGEQA 361 Query: 300 A 300 A Sbjct: 362 A 362 >gi|219853264|ref|YP_002467696.1| glutamate synthase (NADPH) [Methanosphaerula palustris E1-9c] gi|219547523|gb|ACL17973.1| Glutamate synthase (NADPH) [Methanosphaerula palustris E1-9c] Length = 502 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 103/350 (29%), Gaps = 74/350 (21%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM--- 98 EVD +L P++I M+ G + + +A AAEK M G + Sbjct: 153 EVDLLTTLAPNLQLETPIMIGHMSYGAISLNAQ--TAIAKAAEKAGTFMGTGEGGLHKTL 210 Query: 99 --FSDHNAIKSFE---------LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 F H ++ L + A + I + +K ++ V + Sbjct: 211 YPFQKHMIVQVASGRFGVDINYLERGAAIEIKIGQGAKPGIGGHLPGEKVNEEVSLTRM- 269 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIEL 202 + + I P + + + L+ + P+ +K + Sbjct: 270 -----IPVGSDAISPAPHHDIYSIEDLAQLVRALKEATEWKKPVFVKIAAVHNVAAIAAG 324 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP------TPLSLEMARPYC 256 +S I G G + + RD GIP + ++ Sbjct: 325 IARSSADAVVIDGFRGGTGAAPRVFRDH----------VGIPIEAAVAAVDAKLRSQGIR 374 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------------------- 294 NE IASGG+R+ D+ K I LGA + + L Sbjct: 375 NEISIIASGGIRDSTDVTKVIALGADAVYIGTAALVALGCRVCGSCYRNLCPWGIATQRQ 434 Query: 295 --------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I+ E + M G ++ L N +R Sbjct: 435 DLVNRLDPEVGATQVANLIQGWTLEIMDLMGAAGINSIESLRGNRDRLRG 484 >gi|284034038|ref|YP_003383969.1| (S)-2-hydroxy-acid oxidase [Kribbella flavida DSM 17836] gi|283813331|gb|ADB35170.1| (S)-2-hydroxy-acid oxidase [Kribbella flavida DSM 17836] Length = 346 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 96/322 (29%), Gaps = 41/322 (12%) Query: 24 KFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-------GG--------- 67 + + R L V S LG + P+L++ T GG Sbjct: 38 TAWSSYRFRPRVL--TDVSTVGTSTTVLGTPVDGPVLVAPTTLQRLADPGGEAAMAAGVA 95 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + + ++ N + A ++ + + I L L A Sbjct: 96 TARSLLGVSSNAGTTYAEIGATGAPWWLQIYLTRNRDITVRMLDAAVAAGARAVVLTADT 155 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLSSAMDVPL 186 +G L +L+ E+ DL+ I L +P+ Sbjct: 156 PVVGRKEDDGPTVWQAVGPGDLRANLDA--ELYSDEDLAKADDLTPDVIGWLGERTGLPV 213 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 ++K V G D + + +G ++ GG + ++ G Sbjct: 214 VVKGVLRG---DDAQRCVAAGAAGLIVSNHGGRQLDGAIASAHALPEVVEAVAGTG---- 266 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAI 305 + GG+R G +L ++ LGA + P L DSS V + Sbjct: 267 ------------TEVYVDGGIRRGEHVLAALALGARAVFVGRPALWALTADSSAGVTRLL 314 Query: 306 ESLRKEFIVSMFLLGTKRVQEL 327 L E ++ L+G +L Sbjct: 315 TDLYAELAHALTLVGVPHPDDL 336 >gi|307186145|gb|EFN71870.1| Hydroxyacid oxidase 1 [Camponotus floridanus] Length = 243 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 19/127 (14%) Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 LS D++ KSG+ ++ G + + ++ +I + Sbjct: 129 LSWDDVKWL-KSGVAGIIVSNHGARQIDSVPATIEVLPEIS-----------------KA 170 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFI 313 N+ + GG+ G+D+LK++ LGA + P L + +E +R+E Sbjct: 171 VGNQVEIYMDGGVTEGIDVLKALALGAKMVFFGRPMLWGLTYDGEKGAYQILELMRREID 230 Query: 314 VSMFLLG 320 ++ L G Sbjct: 231 LAFALTG 237 >gi|126734716|ref|ZP_01750462.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. CCS2] gi|126715271|gb|EBA12136.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Roseobacter sp. CCS2] Length = 366 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 94/346 (27%), Gaps = 66/346 (19%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 RN+ FD+ L R L + SV K P IS M G N + LA Sbjct: 39 RNRAAFDNLELRPRVL--RDVSDRSLSVPLWDKPTKAPFGISPM-GMCNLSGPGADMMLA 95 Query: 81 IAAEKTKVAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV- 134 A + V + V + + + F+L ++ L + Sbjct: 96 RLAARENVPLGVSTVASTAMEPLIEEAEGNAWFQL-YFSGDGSGTFKLVERAKAAGYDTI 154 Query: 135 -------QKAHQAVHVLGADGLFLHLNPLQEII------------------QPNGNTNFA 169 + + + + + P Q I N + + Sbjct: 155 VLTVDVAEVGRRPRELRHGFTMPFKIGPKQFIDFALHPRWSLTSLFAGKPQMANFDMDGY 214 Query: 170 DL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 D + L L++K V L D +G+ ++ G Sbjct: 215 DFDRTESRAKADWDTLTKLRDMWPGKLVVKGV---LDVEDSVALKSAGVDAIQVSSHGSR 271 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + ++I + GLR+G D++K+ Sbjct: 272 QLDSAPAPILKLAEIRDAL-----------------GPDYPLFYDTGLRSGEDVVKAYAQ 314 Query: 280 GASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 GA+ A + + L+ E +++ + + + Sbjct: 315 GANFTFFGRVLQFAIAAGGEEGLREVWSVLKSETSITLAQISKRSL 360 >gi|288560067|ref|YP_003423553.1| glutamate synthase domain-containing protein [Methanobrevibacter ruminantium M1] gi|288542777|gb|ADC46661.1| glutamate synthase domain-containing protein [Methanobrevibacter ruminantium M1] Length = 470 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 110/298 (36%), Gaps = 45/298 (15%) Query: 25 FFDDWHLIHRAL---PEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD ++ L P +V + GK L P+ IS M+ G ++ Sbjct: 106 SWDDILIMANQLNPFPLEEHADVSTTTVI-GKNALKPMVLESPIYISHMSFGALSYETKV 164 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLIS-----NLGAVQLN 129 LA + K AM G S++ + +Y P+ ++ N A+++ Sbjct: 165 --ALAKGSAMAKTAMCSG--EGGILPDEMANSYKYIFEYVPNHYSLTKENLMNSDAIEIK 220 Query: 130 YDFGVQ---KAHQAVHVLGADGLFLHLNPLQE-IIQPNGNTNFADLSSKIALLSSAM--- 182 G + H + + L P+ E +I P+ + L S + Sbjct: 221 IGQGTKPGMGGHLPAEKITLEIAELRGKPMGEDVISPSLYGEIKS-KEDLKDLVSHLRKE 279 Query: 183 --DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ +K + G D+E + + I GRGG + + RD S Sbjct: 280 SEGRPIGVK-IAAGRIEEDLEFISYAEPDFITIDGRGGATGASPRLIRDATS-------- 330 Query: 241 WGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +PT +L AR Y + + + +GGLR D K++ LGA +A+ L A Sbjct: 331 --VPTIYALARARKYLDENNLDIDLVITGGLRVSSDFAKALSLGADAIAIATGALIAA 386 >gi|262395567|ref|YP_003287420.1| glutamate synthase [NADPH] large chain [Vibrio sp. Ex25] gi|262339161|gb|ACY52955.1| glutamate synthase [NADPH] large chain [Vibrio sp. Ex25] Length = 466 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 109/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVEFL-------GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E + KL+ PLL+S M+ G +I LA AE + G Sbjct: 112 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 169 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A S + A + N+ A G + A + Sbjct: 170 -EGGMLPEEQAANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNV 228 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 229 GKISQVRGIPEGQPAISPPTFKDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 285 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L +G Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 286 DIQFALDAGADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 335 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 336 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 384 >gi|108805933|ref|YP_645870.1| (S)-2-hydroxy-acid oxidase [Rubrobacter xylanophilus DSM 9941] gi|108767176|gb|ABG06058.1| (S)-2-hydroxy-acid oxidase [Rubrobacter xylanophilus DSM 9941] Length = 400 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 20/164 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L + P +LK V + +G+ ++ GG + + + Sbjct: 240 WEDVAWLRGRWEGPFMLKGVMRA--DEALRAVEGAGVTAVSVSNHGGNNIDGLPASVRAL 297 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + A+ + GG+R G D++K++ LGA + +L Sbjct: 298 PAVAE-----------------AVGDRAEVLLDGGIRRGSDVVKALALGARAVMIGRAYL 340 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A V ++ LR ++ +G V E+ ++ Sbjct: 341 WGLAAGGQAGVENVLDILRAGVESTLRGVGKGSVHEVGREDLVV 384 >gi|150403002|ref|YP_001330296.1| glutamate synthase (NADPH) [Methanococcus maripaludis C7] gi|150034032|gb|ABR66145.1| Glutamate synthase (NADPH) [Methanococcus maripaludis C7] Length = 510 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 103/347 (29%), Gaps = 74/347 (21%) Query: 46 PSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQ 95 + KL+ P++I M+ G + + +A A ++ M G Sbjct: 164 LETKIAPNIKLNTPIMIGHMSYGALSLNAH--KAMAKAVKECGTFMGTGEGGLHRDLYGY 221 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLF 150 A F + + + Q + +K V + Sbjct: 222 SDSIITQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRM---- 277 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLK 205 + + I P + + + L+ S +P+ +K + Sbjct: 278 --IPQGSDAISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVAAIANGIAT 335 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEA 259 S I G G + + + RD + GIP +++ + ++ Sbjct: 336 SDADAVVIDGFKGGTGAAPKVFRD----------NVGIPIEVAIAAVDDRLREQGNRHKI 385 Query: 260 QFIASGGLRNGVDILKSIILGASLG-------------------------GLA--SPFLK 292 IASGG+RN D+ KSI LGA G+A P L Sbjct: 386 SIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELV 445 Query: 293 PAMDSSDA---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ DA V I + E + G ++ L N +R Sbjct: 446 KRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIESLRGNRDRLRG 492 >gi|241247973|ref|XP_002402903.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215496418|gb|EEC06058.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 144 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 20/135 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P + + G + + ++ L S +P++LK + G D E + G+ ++ Sbjct: 15 PNSPLSRKQGLVDPSQAWDDVSWLRSITKLPVILKGITTG---DDAEKAISHGVSAIIVS 71 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + + ++ +I + GG+R G D++ Sbjct: 72 NHGGWLLDGVAATIEILPEI-----------------VSAVRGRVEVYMDGGVRRGTDVV 114 Query: 275 KSIILGASLGGLASP 289 K++ LGA + P Sbjct: 115 KALALGAKAVFVGRP 129 >gi|238059389|ref|ZP_04604098.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Micromonospora sp. ATCC 39149] gi|237881200|gb|EEP70028.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Micromonospora sp. ATCC 39149] Length = 314 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 34/185 (18%) Query: 145 GADGLFLHLNPL--QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GA + H + + P+ +A L D+PL++K V L D L Sbjct: 151 GASAVARHTSAAFASALTWPD-----------VAWLRGCTDLPLVVKGV---LDPRDAVL 196 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 + +G ++ GG + + + + + + + Sbjct: 197 AVDAGADAVVVSNHGGRQFDAAPAGLTMLPQVRT-----------------AVGDRCEVL 239 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGT 321 GG+ GVD+L+++ LGAS + P L A+ A AA L E ++ L G Sbjct: 240 VDGGISGGVDVLRALALGASGVLVGRPLLWALAVGGRCAADAAFALLAAELRDALTLAGC 299 Query: 322 KRVQE 326 E Sbjct: 300 ADPAE 304 >gi|69250486|ref|ZP_00605159.1| (S)-2-hydroxy-acid oxidase [Enterococcus faecium DO] gi|68193942|gb|EAN08512.1| (S)-2-hydroxy-acid oxidase [Enterococcus faecium DO] Length = 305 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 91/309 (29%), Gaps = 54/309 (17%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-GNNKMIE 73 + + N F+ ++ R L I D G +L P++ + G Sbjct: 15 DEWTMKENTTSFNTKKIMPRILRGIDSA--DLHTSVFGIELDTPIIQAPSAAQGLAHEKG 72 Query: 74 RINRNLAIAAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 + +AA + +++ + + A + F+L N + Sbjct: 73 EADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRF---NEFILNKA 129 Query: 130 YDFGVQKA-HQAVHVLGADGLFLHLNPLQ-EIIQPN----------GNTNFADLS----- 172 + G + A LG +N Q + PN GN ++ Sbjct: 130 VEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAA 189 Query: 173 -------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 I + +P+++K + S D + + +G ++ GG Sbjct: 190 AKQGLTPDDIKTIKEITHLPVIVKGIQ---SPEDAVIAISAGADGIWVSNHGGRQLDGGP 246 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + ++ I V I G+R G + K++ GA L Sbjct: 247 ASFEVLPKIAEV-----------------VNKRVPVIFDSGVRRGEHVFKALASGADLVA 289 Query: 286 LASPFLKPA 294 + P + Sbjct: 290 IGRPVIYGL 298 >gi|134046623|ref|YP_001098108.1| glutamate synthase (NADPH) GltB2 subunit [Methanococcus maripaludis C5] gi|132664248|gb|ABO35894.1| glutamate synthase (NADPH) GltB2 subunit [Methanococcus maripaludis C5] Length = 510 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 101/338 (29%), Gaps = 73/338 (21%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHNA 104 KL+ P++I M+ G + + +A A ++ M G A Sbjct: 173 KLNTPIMIGHMSYGALSLNAH--KAMAKAVKECGTFMGTGEGGLHRDLYGYSDSIITQVA 230 Query: 105 IKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 F + + + Q + +K V + + + Sbjct: 231 SGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRM------IPQGSDA 284 Query: 160 IQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I P + + + L+ S +P+ +K + S I Sbjct: 285 ISPAPHHDIYSIEDLAQLIRSLKESTRWKMPVFVKISAVHNVAAIANGIATSDADAVVID 344 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G G + + + RD + GIP +++ + ++ IASGG+R Sbjct: 345 GFKGGTGAAPKVFRD----------NVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIR 394 Query: 269 NGVDILKSIILGASLG-------------------------GLA--SPFLKPAMDSSDA- 300 N D+ KSI LGA G+A P L ++ D Sbjct: 395 NSADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVEDGA 454 Query: 301 --VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E + G ++ L N +R Sbjct: 455 RRVANLIHAWTHEIQELLGAAGINSIESLRGNRDRLRG 492 >gi|84515244|ref|ZP_01002606.1| L-lactate dehydrogenase, putative [Loktanella vestfoldensis SKA53] gi|84510527|gb|EAQ06982.1| L-lactate dehydrogenase, putative [Loktanella vestfoldensis SKA53] Length = 387 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 116/374 (31%), Gaps = 83/374 (22%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N FD L R + + +G+ ++ P+ ++ + TG + E Sbjct: 33 EQTFRENTSDFDLIRLRQRI--AVDMTNRTTQSQMIGQDVAMPVALAPVGLTGMQSADGE 90 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--------FELRQY------------ 113 A AAEK V + + + + A + + L+ Sbjct: 91 I---KAAKAAEKFGVPFTLSTMSICSIEDVAENTTKPFWFQVYTLKDDDFMQRLFDRARA 147 Query: 114 ---------------------------APHTVLISNLGAVQLNYDFGVQKAHQAVHVLG- 145 AP ++++ + + +G++ G Sbjct: 148 AGCSAIVITLDLQILGQRHKDLKNGLSAPPKFTLASMADLATKWGWGIEMLQTKRRFFGN 207 Query: 146 ----ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 A G+ +P + A ++A L ++LK + L + D Sbjct: 208 IVGHAKGVS---DPSSLSSWTAEAFDHALDWDRVAQLMKMWGGKVILKGI---LDADDAR 261 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G ++ GG S I ++ + Sbjct: 262 KAAALGADAIIVSNHGGRQLDGAVSSIRALPAILD-----------------AVGDKVEV 304 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLG 320 G+R+G D+LK++ LGA + ++ +A V A+E + KE +M L G Sbjct: 305 HFDSGIRSGQDVLKALALGAKGTYIGRAYINGLGAMGEAGVTRALEVIHKELDTTMALCG 364 Query: 321 TKRVQELYLNTALI 334 + ++ + + L+ Sbjct: 365 RRDIRTVDRDILLV 378 >gi|91225469|ref|ZP_01260591.1| putative glutamate synthetase [Vibrio alginolyticus 12G01] gi|91189832|gb|EAS76105.1| putative glutamate synthetase [Vibrio alginolyticus 12G01] Length = 513 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E +G +L+ PLL+S M+ G +I LA AE + G Sbjct: 159 LEDVPVSTELIVGPNARKPLRLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 216 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A+ S + A + N+ A G + A + Sbjct: 217 -EGGMLPEEQAVNSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNV 275 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 276 GKISQVRGIPEGQPAISPPTFKDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 332 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L +G Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 333 DIQFALDAGADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR D +K++ LGA +A+ AM S V A I Sbjct: 383 KGVSDRVTLIITGGLRVPTDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|159905253|ref|YP_001548915.1| glutamate synthase (NADPH) [Methanococcus maripaludis C6] gi|159886746|gb|ABX01683.1| Glutamate synthase (NADPH) [Methanococcus maripaludis C6] Length = 510 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 101/338 (29%), Gaps = 73/338 (21%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHNA 104 KL+ P++I M+ G + + +A A ++ M G A Sbjct: 173 KLNTPIMIGHMSYGALSLNAH--KAMAKAVKECGTFMGTGEGGLHRDLYGYSDSIITQVA 230 Query: 105 IKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 F + + + Q + +K V + + + Sbjct: 231 SGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRM------IPQGSDA 284 Query: 160 IQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I P + + + L+ S +P+ +K + S I Sbjct: 285 ISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVAAIANGIATSDADAVVID 344 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G G + + + RD + GIP +++ + ++ IASGG+R Sbjct: 345 GFKGGTGAAPKVFRD----------NVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIR 394 Query: 269 NGVDILKSIILGASLG-------------------------GLA--SPFLKPAMDSSDA- 300 N D+ KSI LGA G+A P L ++ D Sbjct: 395 NSADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVEDGA 454 Query: 301 --VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E + G ++ L N +R Sbjct: 455 RRVANLIHAWTHEIQELLGAAGINSIESLRGNRDRLRG 492 >gi|304314315|ref|YP_003849462.1| glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] gi|302587774|gb|ADL58149.1| predicted glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] Length = 619 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 122/316 (38%), Gaps = 68/316 (21%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHR--ALPEIS-FDEVDPSVEFLGKK-------LSFPLL 60 V + G +R FDD ++ ++P + + E + LG + L P+L Sbjct: 234 KYVLRGFGTERRLPNFDDIIILPAQASIPPVDKYREPCNTSVVLGDRFAEEPLVLQTPVL 293 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQYAPHTV 118 I+ M+ G ++++K+AMA G+ V + E R+ A + + Sbjct: 294 IAGMSFGA-------------LSKESKLAMAKGTSLVGSCANTGEGGMLPEERELADNLM 340 Query: 119 LISNLGAVQLNYDF-------GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + G ++ D+ V+ A +G L ++P E+ + G D Sbjct: 341 VQYSSGRFGVSSDYLNVADAIEVKIGQGAKPGMGGHLLAEKVSP--EVAKIRGIPEGTDA 398 Query: 172 SS--------KIALLSSAM---------DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 S + L+ + VP+++K +G G D+++ ++G + Sbjct: 399 LSPARFLDATREGDLAKHIELLREVTDWRVPIVVK-LGPGRVYEDVQIAAEAGADVISVD 457 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G G + + E + G+PT +L A +E I +GG+R Sbjct: 458 GMEGGTGAAPEVVIEHT----------GVPTLAALVQAVNGLNDIGLKDEVDLIITGGIR 507 Query: 269 NGVDILKSIILGASLG 284 +G D+ K++ +GA Sbjct: 508 SGADVAKAMAMGADAV 523 >gi|212633837|ref|YP_002310362.1| glutamate synthase domain-containing protein [Shewanella piezotolerans WP3] gi|212555321|gb|ACJ27775.1| Glutamate synthase domain protein [Shewanella piezotolerans WP3] Length = 514 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 43/260 (16%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FEL 110 +L+ PL +S M+ G +I LA AE + G + M + A S F Sbjct: 178 LRLNIPLFVSDMSFGALSEEAKI--ALAKGAELAGTGICSG-EGGMLPEEQAANSRYFYE 234 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQA----------------VHVLGADGLFLHLN 154 A + L VQ + G Q A V + A + Sbjct: 235 LASAEFGFDEAKLKNVQAFHFKGGQGAKTGTGGHLPGNKNVGKIAEVRGIEAGTAAVSPP 294 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 ++++ T+F + ++ ++ +P+ K + + DI+ L + Y + Sbjct: 295 TFKDLV---SVTDFKLFADRVRQITG--GIPIGFKLSANHIEA-DIQFALDASADYIILD 348 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLR 268 GRGG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 349 GRGGGTGAAPEMFRDHIS----------VPTIPALARARKYLDQQGASGRVTLIITGGLR 398 Query: 269 NGVDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 399 VPIDFVKALALGADGVAVSN 418 >gi|160878283|ref|YP_001557251.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] gi|160426949|gb|ABX40512.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Clostridium phytofermentans ISDg] Length = 295 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 69/176 (39%), Gaps = 26/176 (14%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G+ + +I + D+P ++K V LS D L++G++ ++ G Sbjct: 144 GHPMTSKSLDEIKEFVKSTDLPFIIKGV---LSEQDALKCLEAGVKGIVVSHHHG----- 195 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 ++ IP L +A + G+ +G+D+ K++ LGA+ Sbjct: 196 --------------IMNYAIPPLKILPRIAAIVNKQIPIFVDCGVASGMDVFKALALGAT 241 Query: 283 LGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + P D ++ V I + +E M + ++ +++ ++I ++ Sbjct: 242 AVSAGRIIMDPLSKDGANGVKDTIIRMTEELAGVMARTCSCDMK--HIDPSVIHNK 295 >gi|261252026|ref|ZP_05944600.1| glutamate synthase [NADPH] large chain [Vibrio orientalis CIP 102891] gi|260938899|gb|EEX94887.1| glutamate synthase [NADPH] large chain [Vibrio orientalis CIP 102891] Length = 517 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 43/260 (16%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ PL +S M+ G ++ +LA AE + G + M + A S + Sbjct: 179 LKLNIPLFVSDMSFGALSEEAKV--SLAKGAELAGTGICSG-EGGMLPEEQAANSRYFYE 235 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKA-------------HQAVHVLGADGLFLHLN 154 A + N+ A G + V + A + Sbjct: 236 LASAGFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGAKNIGKIAQVRGIEAGTAAISPP 295 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +++ +F ++++ ++ +P+ K + DI+ L + Y + Sbjct: 296 TFKDLTTTE---DFKQFANRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILD 349 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLR 268 GRGG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 350 GRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKVGASGRVTLIITGGLR 399 Query: 269 NGVDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 400 VPMDFVKAMALGADGVAISN 419 >gi|256004881|ref|ZP_05429855.1| Glutamate synthase (NADPH) [Clostridium thermocellum DSM 2360] gi|255991191|gb|EEU01299.1| Glutamate synthase (NADPH) [Clostridium thermocellum DSM 2360] gi|316941044|gb|ADU75078.1| Glutamate synthase (NADPH) [Clostridium thermocellum DSM 1313] Length = 501 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 104/336 (30%), Gaps = 63/336 (18%) Query: 51 LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--- 107 G +LS P++ S+M+ G+ +LA AA++ + G + + + Sbjct: 161 CGIELSVPIMFSAMSYGSISYNAH--ESLARAAKEAGILYNTGEGGLHRDLYQYGSNTIV 218 Query: 108 ------FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 F + + + Q G+ ++G + + I Sbjct: 219 QVASGRFGVHKDYLEAGAAIEIKMGQ-GAKPGIGGHLPGTKIVGDISRTRMVPEGSDAIS 277 Query: 162 PNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 P + + DL + L A + P+++K + +SG I G Sbjct: 278 PAPHHDIYSIEDLRQLVYSLKEATNYTKPVIVKIAAVHNVAAIASGIARSGADIIAIDGF 337 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + + RD + GIP L+L + + G +RN Sbjct: 338 RGGTGAAPTRIRD----------NVGIPIELALASVDQRLREEGIRDNVSIVVGGSIRNS 387 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D++K++ LGA + + L Sbjct: 388 SDVVKAVALGADCVYIGTAALIALGCHLCRSCHTGKCNWGIATQEPELVKRLNPDMGYKR 447 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + + + E M +G ++ L N ++R Sbjct: 448 LVNLVNAWKHEIKEMMGGMGINSIESLRGNRLMLRG 483 >gi|45357644|ref|NP_987201.1| glutamate synthase large subunit [Methanococcus maripaludis S2] gi|45047204|emb|CAF29637.1| glutamate synthase; large subunit; archaeal subunit 2 [Methanococcus maripaludis S2] Length = 510 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 101/336 (30%), Gaps = 65/336 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 KL P++I M+ G + + +A A ++ M G S + Sbjct: 171 NLKLDTPIMIGHMSYGALSLNAH--KAMAKAVKECGTFMGTG--EGGLHRDLYGYSDNVI 226 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAV---------HVLGADGLFLHLNP-LQEIIQ 161 N + ++ A + A+ + P + I Sbjct: 227 TQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAIS 286 Query: 162 PNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 P + + + L+ S +P+ +K S S I G Sbjct: 287 PAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGF 346 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + + + RD + GIP +++ + ++ IASGG+RN Sbjct: 347 KGGTGAAPKVFRD----------NVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNS 396 Query: 271 VDILKSIILGASLG-------------------------GLA--SPFLKPAMDSSDA--- 300 D+ KSI LGA G+A P L ++ DA Sbjct: 397 ADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARR 456 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E + G ++ L N +R Sbjct: 457 VANLIHAWTHEIQELLGAAGINSIESLRGNRDRLRG 492 >gi|125972722|ref|YP_001036632.1| glutamate synthase (NADPH) GltB2 subunit [Clostridium thermocellum ATCC 27405] gi|281416909|ref|ZP_06247929.1| Glutamate synthase (NADPH) [Clostridium thermocellum JW20] gi|125712947|gb|ABN51439.1| glutamate synthase (NADPH) GltB2 subunit [Clostridium thermocellum ATCC 27405] gi|281408311|gb|EFB38569.1| Glutamate synthase (NADPH) [Clostridium thermocellum JW20] Length = 501 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 104/336 (30%), Gaps = 63/336 (18%) Query: 51 LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--- 107 G +LS P++ S+M+ G+ +LA AA++ + G + + + Sbjct: 161 CGIELSVPIMFSAMSYGSISYNAH--ESLARAAKEAGILYNTGEGGLHRDLYQYGSNTIV 218 Query: 108 ------FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 F + + + Q G+ ++G + + I Sbjct: 219 QVASGRFGVHKDYLEAGAAIEIKMGQ-GAKPGIGGHLPGTKIVGDISRTRMVPEGSDAIS 277 Query: 162 PNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 P + + DL + L A + P+++K + +SG I G Sbjct: 278 PAPHHDIYSIEDLRQLVYSLKEATNYTKPVIVKIAAVHNVAAIASGIARSGADIIAIDGF 337 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + + RD + GIP L+L + + G +RN Sbjct: 338 RGGTGAAPTRIRD----------NVGIPIELALASVDQRLREEGIRDNVSIVVGGSIRNS 387 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D++K++ LGA + + L Sbjct: 388 SDVVKAVALGADCVYIGTAALIALGCHLCRSCHTGKCNWGIATQEPELVKRLNPDMGYKR 447 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + + + E M +G ++ L N ++R Sbjct: 448 LVNLVNAWKHEIKEMMGGMGINSIESLRGNRLMLRG 483 >gi|304316117|ref|YP_003851262.1| glutamate synthase (NADPH) [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777619|gb|ADL68178.1| Glutamate synthase (NADPH) [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 501 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 105/335 (31%), Gaps = 65/335 (19%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+FP++ S+M+ G+ +LA AA++ + G + K F Sbjct: 163 LKLNFPIMFSAMSYGSISYNAH--ASLARAAKELGIYYNTG-------EGGLHKDFRKYG 213 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAV--------------HVLGADGLFLHLNPL-Q 157 + S V Y + + AD + P+ Sbjct: 214 ENTIVQVASGRFGVDREYLKTAAAVEIKIGQGAKPGIGGHLPGEKVSADISETRMIPVGS 273 Query: 158 EIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + I P + + DLS I L A D P+ +K + ++G Y Sbjct: 274 DAISPAPHHDIYSIEDLSQLIYSLKEATDYKKPVGVKIAAVNNVAAIASGIARAGADYIA 333 Query: 213 IAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 I G RGGT I I F I + S + + IA+G +RN Sbjct: 334 IDGFRGGT--GAAPKRIRDNVGIPIEFA---IASVDSRLRSEGIRHTISLIAAGSIRNSA 388 Query: 272 DILKSIILGASLGGLASPFLKPA------------------------------MDSSDAV 301 DI+K+I LGA + S L + Sbjct: 389 DIIKAIALGADAVYIGSAALIALGCHMCQQCNTGKCNWGIATQDPNLVKRLNPEIGYKRL 448 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + I + E + +G ++ L N ++R Sbjct: 449 INLITAWGHEIQEMLGGMGINDIESLKGNRLMLRG 483 >gi|126180077|ref|YP_001048042.1| glutamate synthase (NADPH) [Methanoculleus marisnigri JR1] gi|125862871|gb|ABN58060.1| glutamate synthase (NADPH) GltB2 subunit [Methanoculleus marisnigri JR1] Length = 502 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 109/348 (31%), Gaps = 70/348 (20%) Query: 43 EVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +V+ ++ P++I M+ G + ++ +A AA++T M G + Sbjct: 153 DVELRTRLTPNLRIETPVMIGHMSYGAISLNAQL--AMARAAKETGTYMGTGEGGLH--- 207 Query: 102 HNAIKSFELRQYAP--HTVLISNLGAVQLNYDFGVQKAHQAVHVLG---------ADGLF 150 A+ ++ R N+ ++ ++ A +G AD Sbjct: 208 -AALHPYQDRMIVQVASGRFGVNIDYLERGAAIEIKIGQGAKPGIGGHLPGEKVCADISR 266 Query: 151 LHLNP-LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGL 204 + P + I P + + + L+ ++ P+ +K + Sbjct: 267 TRMIPEGSDAISPAPHHDIYSIEDLAQLVRGLKEATEWKKPVFVKIAAVHNVAAVAAGIA 326 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNE 258 +S + G G + + RD GIP ++ + NE Sbjct: 327 RSPADAVVVDGFRGGTGAAPTVFRDH----------VGIPIEAAVASVDKKLREQGIRNE 376 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------------------------ 294 IASGG+R D+ K+I LGA + + L Sbjct: 377 ISVIASGGIRGSADVAKAIALGADAVYIGTAALAAMGCRVCGNCYRGLCPWGIATQRPDL 436 Query: 295 ------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++S+ V I + E + G ++ L N +R Sbjct: 437 VARLNPDEASEQVANLIRAWTLELAELLGAAGINSIESLRGNRDRLRG 484 >gi|126178283|ref|YP_001046248.1| glutamate synthase (NADPH) [Methanoculleus marisnigri JR1] gi|125861077|gb|ABN56266.1| glutamate synthase (NADPH) GltB2 subunit [Methanoculleus marisnigri JR1] Length = 505 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 115/348 (33%), Gaps = 70/348 (20%) Query: 43 EVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +V+ S E L P+++ M+ G + + +A AA++T M G + Sbjct: 156 DVELSTELTPNLMLETPIMLGHMSYGALSLNAHV--AMARAAKETGTFMGTGEGGLH--- 210 Query: 102 HNAIKSFELR--------QYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLF 150 + ++ R ++ + + A++L G + H + AD Sbjct: 211 -PGLYPYQDRMIVQVASGRFGVNIDYLERGAAIELKLGQGAKPGIGGHLPGEKVSADVSR 269 Query: 151 LHLNP-LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGL 204 + P + I P + + + L+ ++ P+ K ++ ++ Sbjct: 270 TRMIPEGSDAISPAPHHDIYGIEDLPQLVNSVKEATERKKPIFAKIAAVNNNAENVAAVA 329 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNE 258 +SG+ I G G + + RD GIP +++ A + NE Sbjct: 330 RSGVDAIAIDGFRGGTGAAPRVFRDH----------VGIPIEVAIATADRELRKQGLRNE 379 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP------------------AMDSSD- 299 IA G +R D++K+I LGA +A+ L A D Sbjct: 380 VSLIACGSIRESTDVVKAIALGADAVYIATAALAAMGCRVCGNCYQGLCPWGIATQRPDL 439 Query: 300 -----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I + E M G ++ L N +R Sbjct: 440 VARLDPDVASKQVANLIHAWTLEITELMGAAGINSIESLRGNRDRLRG 487 >gi|222102122|ref|YP_002546712.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Agrobacterium radiobacter K84] gi|221728239|gb|ACM31248.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Agrobacterium radiobacter K84] Length = 384 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + + +A L LL+K + L S D + ++ G ++ GG Sbjct: 224 RQMDASFSWEDLARLRDRWPHRLLVKGI---LRSEDAQKCVELGADGVILSNHGG----- 275 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 R ++S + P+ + + G R G +I+K++ LGA + Sbjct: 276 ----RQVDSCLS----------PMEVLSQTARLVTKPILIDSGFRRGGEIVKALALGAKI 321 Query: 284 GGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L L A + + LR E ++ L+G V +L Sbjct: 322 VLLGRATLYGLAARGEPGIDDVLSILRTEIDRTLALIGCNSVAQL 366 >gi|294142238|ref|YP_003558216.1| glutamate synthase [Shewanella violacea DSS12] gi|293328707|dbj|BAJ03438.1| glutamate synthase, putative [Shewanella violacea DSS12] Length = 523 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 96/257 (37%), Gaps = 37/257 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G + LAI AE + G + M + A S + Sbjct: 187 LKLKIPLFVSDMSFGALSEEAK--TALAIGAELAGTGICSG-EGGMLPEEQAQNSRYFYE 243 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQP- 162 A L+ ++ A G + + G L + Q I P Sbjct: 244 LASAQFGYREELLDSIQAFHFKGGQGAKTGTGGHLPGIKNRGKISLVRGIPEGQPAISPP 303 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 N +F + ++ +S VP+ K + DI+ L + Y + GRG Sbjct: 304 TFKELNTPCDFKRFAERVREISG--GVPIGFKLSANHIER-DIQFALDASADYIILDGRG 360 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + E RD S +PT +L AR Y +E I +GGLR + Sbjct: 361 GGTGAAPEMFRDHIS----------VPTIPALARARRYLDEKGVSGKVTLIITGGLRVPM 410 Query: 272 DILKSIILGASLGGLAS 288 D +K++ LGA +++ Sbjct: 411 DFVKAMALGADGVAISN 427 >gi|325968795|ref|YP_004244987.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta moutnovskia 768-28] gi|323707998|gb|ADY01485.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta moutnovskia 768-28] Length = 460 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 124/339 (36%), Gaps = 53/339 (15%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +V+ G K+S P+++ SM G+ + R + ++A AA K + M +G + Sbjct: 105 DVNLEDSLGGFKVSMPIVVGSM--GSTTVASRFSLDIARAAAKAGIVMGIGENVAAVRGY 162 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK-AHQAVHVL----------------G 145 + + + L++ L V +Q+ A L G Sbjct: 163 SRRYTRGHPSFKER--LMAYLTNVDKYGGVIIQQNVEDAYDELWNRVYSDKDVEPYIEEG 220 Query: 146 ADGLFLHL-------------NPLQEIIQPNGNTNFADLSSKI-ALLSSAMDVPL----- 186 G + + P +E I+ +F KI A + VP Sbjct: 221 LIGFEIKMGQGAKPGLGGVIKIPKEEAIRLKAKYHFEIDPEKIRAKYITRYSVPGTYTED 280 Query: 187 LLKEVGCGLSSM--DIELGLKSGI-----RYFDIAGRGGTSWSRIES-HRDLESDIGIVF 238 +L+ + + + + +K G R IA G I+ + Sbjct: 281 ILRGMIRFMKTAYPRARIWIKLGPYRDVDRAISIAHEEGAHAVVIDGKEGGTGMAPSVAM 340 Query: 239 QDWGIPTPLSLEMARPYC----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +D G PT ++L+ + +G L NG ++K+I LGAS +A PFL A Sbjct: 341 KDLGYPTIVALKKIHDARKLGITNISLLLAGRLYNGSHVVKAIALGASGAYMARPFLMAA 400 Query: 295 M-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 M V+ IE++++E + + LG ++E+ Sbjct: 401 MVKGERGVLNYIEAVKEEMQMLISALGKYGIKEVNTEDV 439 >gi|300719076|ref|YP_003743879.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Erwinia billingiae Eb661] gi|299064912|emb|CAX62032.1| putative FMN-dependent alpha-hydroxy acid dehydrogenase [Erwinia billingiae Eb661] Length = 354 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 111/341 (32%), Gaps = 57/341 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDE--VDPSVEFLGKKLSFPLLISSMTGG--- 67 D G D N + + L LP + ++ +EF G++ + PL + + G Sbjct: 33 ALLDAG-DVNSQDLQRYRL----LPRVMRANTGINTQIEFAGQRWAAPLGVGAFAGDAIF 87 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI---KSFELRQYAPHTVLISNLG 124 + + + I A + ++ ++ +A+ + V + + + A I+ L Sbjct: 88 HPEGLLPI----ARSCKRLQLPLAISEETVTPLNEICAVYDGCWLQLRAAGDLARIAGLI 143 Query: 125 AVQLNYD-----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN--------TNFADL 171 A V V L G + LQ ++ G+ F Sbjct: 144 AHAAECGAKGIILTVLAPVHPVAGLQPGGFSIGEALLQRGMKTIGSTGPGVQALPAFPCW 203 Query: 172 ----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +++ +PLL+K + L D G + + G Sbjct: 204 GWDELRQACEMAARHQLPLLVKGI---LHPDDAVAAQNVGCQGIIASNIG---------L 251 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 R W P L R + + GG+R+G D + + LGASL + Sbjct: 252 RQSSR--------WATP-VQQLAALRQQYHG-DLVLDGGVRSGTDAVVAACLGASLSLVV 301 Query: 288 SPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P + + +AV + E G ++EL Sbjct: 302 RPVISALVAGGEEAVFGLLSGWVNEITALSHWCGVSEIREL 342 >gi|153869759|ref|ZP_01999291.1| Glutamate synthase (NADPH) [Beggiatoa sp. PS] gi|152073779|gb|EDN70713.1| Glutamate synthase (NADPH) [Beggiatoa sp. PS] Length = 537 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 115/325 (35%), Gaps = 50/325 (15%) Query: 26 FDDWHLI----HRALPEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERIN 76 ++D ++ H+ +P + D V V L PL +S M+ G +I Sbjct: 170 WEDIQILTAQLHK-VPLLDDDSVGTQVIIGPNAKKPLTLDIPLFVSDMSYGALSEEAKI- 227 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYD 131 L+ AE + G + M + S L + A I A Sbjct: 228 -ALSKGAELAGTGICSG-EGGMLEEEQTSNSKYLYELASARFGYSMDKIQKTQAFHFKCG 285 Query: 132 FGVQKA---HQAVHVLGADGLFL-HLNPLQEIIQPNGNTNFADLSSKIALLSSAM----- 182 G + H H + + LN + I P ++ K + + Sbjct: 286 QGAKTGTGGHLPGHKVKGKIAQVRGLNEGEPAISPPRFPDWEH-LDKYREFAEEVRQATG 344 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+ +K + DIE L+ G+ Y + GRGG + + RD + Sbjct: 345 GIPIGVKLSAQHIER-DIEAALQIGVDYIILDGRGGGTGAAPLLFRD----------NIS 393 Query: 243 IPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--- 294 +PT +L AR Y + + + +GGLR VD +K++ LGA +++ L+ Sbjct: 394 VPTIPALARARRYLDKKGRRDVSLVITGGLRLPVDFVKALALGADAIAVSNAALQAIGCL 453 Query: 295 ---MDSSDAVVAAIESLRKEFIVSM 316 +D I + + E M Sbjct: 454 GMRACHTDNCPVGIATQKTELRARM 478 >gi|15669542|ref|NP_248353.1| glutamate synthase GltB [Methanocaldococcus jannaschii DSM 2661] gi|41018428|sp|Q58746|GLUS_METJA RecName: Full=Glutamate synthase gi|1591994|gb|AAB99362.1| glutamate synthase (gltB) [Methanocaldococcus jannaschii DSM 2661] gi|63145885|gb|AAY33887.1| glutamate synthase [Methanocaldococcus jannaschii] Length = 510 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 103/339 (30%), Gaps = 71/339 (20%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDH 102 KL P++I+ M+ G + + + A A ++ M G Sbjct: 171 NLKLDTPIMIAHMSYGALSLNAHL--SFAKAVKECGTFMGTGEGGLPKALYPYADHIITQ 228 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQE 158 A F + + + A+++ G + H + A+ + P + Sbjct: 229 VASGRFGVNEEY-----LMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATRMIPEGSD 283 Query: 159 IIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + + L+ S P+ +K + S I Sbjct: 284 AISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVI 343 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGL 267 G G + + + RD GIP +++ NE IASGG+ Sbjct: 344 DGYKGGTGAAPKVFRDH----------VGIPIEMAIAAVDQRLREEGLRNEISIIASGGI 393 Query: 268 RNGVDILKSIILGASLG-------------------------GLA--SPFLKPAMD---S 297 R D+ K+I LGA G+A P L +D Sbjct: 394 RCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVG 453 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I++ E + G ++ L N +R Sbjct: 454 ARRVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|269962943|ref|ZP_06177281.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832305|gb|EEZ86426.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 534 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 99/276 (35%), Gaps = 44/276 (15%) Query: 41 FDEVDPSVEF-LGKK------LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V E +G K L PL +S M+ G +I +LA AE + G Sbjct: 180 MEDVSVKTELVIGPKAKKPLVLKIPLFVSDMSFGALSEEAKI--SLAKGAELAGTGICSG 237 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A S + A + N+ A G + A + Sbjct: 238 -EGGMLPEEQAANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNV 296 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 297 GKISQVRGIPEGQSAISPPTFKDLHTPEDFKKFADRVREVTG--GIPIGFKLSANHIE-E 353 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMA 252 DI+ L + Y + GRGG + + RD S +PT +L A Sbjct: 354 DIQFALDASADYIILDGRGGGTGAAPAMFRDHIS----------VPTIPALARARRYLDA 403 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + I +GGLR +D +K++ LGA +++ Sbjct: 404 QGVSDRVTLIVTGGLRVPMDFVKAMALGADGVAISN 439 >gi|289191723|ref|YP_003457664.1| Glutamate synthase (NADPH) [Methanocaldococcus sp. FS406-22] gi|288938173|gb|ADC68928.1| Glutamate synthase (NADPH) [Methanocaldococcus sp. FS406-22] Length = 510 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 99/337 (29%), Gaps = 67/337 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDH 102 KL P++I+ M+ G + + + A A ++ M G Sbjct: 171 NLKLDTPIMIAHMSYGALSLNAHL--SFAKAVKECGTFMGTGEGGLPKALYPYADHIITQ 228 Query: 103 NAIKSFELRQYA--PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 A F + + + +G G + + A + + + I Sbjct: 229 VASGRFGVNEEYLMKGAAIEIKIGQGAKPGIGGHLPGEKVTAEISATRM---IPEGSDAI 285 Query: 161 QPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + + + L+ S P+ +K + S I G Sbjct: 286 SPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVIDG 345 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + + RD GIP +++ NE IASGG+R Sbjct: 346 YKGGTGAAPKVFRDH----------VGIPIEMAIAAVDQRLREEGLRNEISIIASGGIRC 395 Query: 270 GVDILKSIILGASLG-------------------------GLA--SPFLKPAMD---SSD 299 D+ K+I LGA G+A P L +D + Sbjct: 396 AADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVGAR 455 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I++ E + G ++ L N +R Sbjct: 456 RVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|167768923|ref|ZP_02440976.1| hypothetical protein ANACOL_00240 [Anaerotruncus colihominis DSM 17241] gi|167668563|gb|EDS12693.1| hypothetical protein ANACOL_00240 [Anaerotruncus colihominis DSM 17241] Length = 501 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 108/336 (32%), Gaps = 67/336 (19%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 L P+L S+M+ G+ LA AA + + G + + ++ + Q Sbjct: 163 LTLDVPVLFSAMSYGSISYNAH--ECLARAARQLGILYNTGEGGLHEDFYAYGEN-TIVQ 219 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQA----------VHVLGADGLFLHLNPLQEIIQP 162 A ++G + ++ A ++G + + I P Sbjct: 220 VA-SGRFGVHVGYLNAGAAVEIKMGQGAKPGIGGHLPGAKIIGDISRTRMIPEGSDAISP 278 Query: 163 NGNTNFADLSSKIALLSSAMD------VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + L ++ P+++K + +SG I G Sbjct: 279 APHHDIYSIED-LRQLVDSLKEATGRKKPVIVKIAAVHNVAAIASGIARSGADIIAIDGF 337 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNG 270 G + + RD + GIP L+L +E IA G +R+ Sbjct: 338 SGGTGAAPARIRD----------NVGIPIELALAAVDQRLRDECIRDEVSIIAGGSIRSS 387 Query: 271 VDILKSIILGASLG-------------------------GLA--SPFLKPAMDSSDAVVA 303 D++K++ LGA G+A P L +D D V Sbjct: 388 ADVVKAVALGADAVYIGTAALMALGCHLCRSCQKGLCNWGIATQRPELTARLDPEDGVRR 447 Query: 304 AIE---SLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E M +G ++ L N ++R Sbjct: 448 LVNLVTAWKHEIKEMMGGMGINSIEALRGNRLMLRG 483 >gi|289811633|ref|ZP_06542262.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 218 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 20/126 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 IA + +P+++K + S D E+ +++G ++ GG S D+ Sbjct: 109 EDIAYVHRISGLPVIVKGIQ---SPEDAEIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLP 165 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 I A+ I G+R G + K++ GA + + P L Sbjct: 166 AI-----------------AKVVNKRVPVIFDSGVRRGSHVFKALASGADIVAVGRPVLY 208 Query: 293 PAMDSS 298 Sbjct: 209 GLNLGG 214 >gi|127513912|ref|YP_001095109.1| ferredoxin-dependent glutamate synthase [Shewanella loihica PV-4] gi|126639207|gb|ABO24850.1| ferredoxin-dependent glutamate synthase [Shewanella loihica PV-4] Length = 516 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 98/262 (37%), Gaps = 37/262 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L PLL+S M+ G ++ LA AE + G + M + A S + Sbjct: 181 LRLKIPLLVSDMSFGALSEEAKV--ALAKGAELAGTGICSG-EGGMLPEEQAANSRYFYE 237 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQP- 162 A L++ + A G + G + Q+ I P Sbjct: 238 LASAQFGYQEALMAKIQAFHFKGGQGAKTGTGGHLPGSKNQGKIAQIRGIPAGQDAISPP 297 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 N +F + ++ LS VP+ K + DI+ L + Y + GRG Sbjct: 298 RFRELNSVADFKRFADRVRELSG--GVPIGFKLSANHIER-DIQFALDASADYIILDGRG 354 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + + RD S +PT +L AR Y ++ I +GGLR + Sbjct: 355 GGTGAAPQIFRDHIS----------VPTIPALARARRYLDQQGASGRVTLIITGGLRLPM 404 Query: 272 DILKSIILGASLGGLASPFLKP 293 D +K++ LGA LA+ ++ Sbjct: 405 DFVKAMALGADGVALANSAMQA 426 >gi|84497720|ref|ZP_00996542.1| lactate 2-monooxygenase [Janibacter sp. HTCC2649] gi|84382608|gb|EAP98490.1| lactate 2-monooxygenase [Janibacter sp. HTCC2649] Length = 436 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 21/163 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I L +P+LLK + L D + + GI ++ GG R ++ Sbjct: 290 WAHIETLRERTRIPVLLKGI---LHPDDAQRAVDLGIDGIIVSNHGG---------RQVD 337 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I + GI + + G+R G D++ ++ LGA + P + Sbjct: 338 RSIASLDALVGI--------RERIGRDPVVLLDSGVRTGADVMIALALGADAALIGRPHI 389 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 A+D +D V I++L E ++M L G + ++ L Sbjct: 390 YGLALDGADGVRDVIDNLIAELDLTMGLTGAATIADITREAFL 432 >gi|147669597|ref|YP_001214415.1| glutamate synthase (NADPH) GltB2 subunit [Dehalococcoides sp. BAV1] gi|146270545|gb|ABQ17537.1| glutamate synthase (NADPH) GltB2 subunit [Dehalococcoides sp. BAV1] Length = 500 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSF 108 K+ PL+ S+M+ G + ++R+LA AA+ G S + F D+ ++ Sbjct: 163 KIDVPLMFSAMSYGAISL--NVHRSLAQAAKNMGTMWNTGEGGLHSSLMEFKDNTIVQVA 220 Query: 109 ELRQYAPHTVLISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 R + L N G V++ G + H + AD + P+ + I P Sbjct: 221 SGRYGVQNDYL--NSGRIVEIKIGQGAKPGIGGHLPGEKVSADVSLTRMIPMGTDAISPA 278 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + L+ ++ VP+ +K + +++G I G G Sbjct: 279 PQHDIYSIEDLSQLIYGLKEATRYRVPISVKIAAVHNVAAIASGIVRAGADIVTIDGMRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + + RD + GIP L+L N+A + SGG+RN D Sbjct: 339 ATGAAPKVIRD----------NVGIPIELALAAVDSRLREEGIRNQASLVISGGIRNSGD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 + K+I LGA + + L + + Sbjct: 389 VFKAIALGADAVNIGTAALVALGCHLCQQCHTGKCSWGICTSDLALTKRINPEIGAKRLT 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + LG ++ L N +R Sbjct: 449 NLLRGWSLEIKDMLGGLGVNAIESLRGNRLHLRG 482 >gi|91783388|ref|YP_558594.1| putative L-lactate dehydrogenase [Burkholderia xenovorans LB400] gi|91687342|gb|ABE30542.1| Putative L-lactate dehydrogenase [Burkholderia xenovorans LB400] Length = 396 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 20/156 (12%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + I + L+LK V +S+ D L ++GI ++ GG D Sbjct: 251 WAHIERIRQRWPGRLVLKGV---MSADDALLAQRAGIDGIIVSNHGGRQVDCALGALDAL 307 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I R + I GG+R G D+LK++ GA + P L Sbjct: 308 DAIAA----------------RVDRDRLALIYDGGIRRGSDVLKALHGGAHFVLVGRPLL 351 Query: 292 -KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A + + A+ L++E +M LLG R+ E Sbjct: 352 MAAAAADAIGIAYALSLLQREIGTNMGLLGINRIDE 387 >gi|308047779|ref|YP_003911345.1| ferredoxin-dependent glutamate synthase [Ferrimonas balearica DSM 9799] gi|307629969|gb|ADN74271.1| ferredoxin-dependent glutamate synthase [Ferrimonas balearica DSM 9799] Length = 524 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 92/262 (35%), Gaps = 36/262 (13%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FEL 110 L+ PL +S M+ G +I LA AE + G + M A S F Sbjct: 187 LTLAMPLFVSDMSFGALSREAKI--ALAQGAELAGTGICSG-EGGMLDAEQAACSRYFYE 243 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVLGADGLFLHLNPLQEIIQPN 163 A + L VQ + Q A A V L Q I P Sbjct: 244 LAAARFGFDEAKLKGVQALHFKAGQAAKTGTGGHLPADKVTEEIAAVRGLPAGQPAISPA 303 Query: 164 G------NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 +F + +I ++ +P+ K + DI+ L++ Y + GRG Sbjct: 304 RFTDLTSPRDFRRCADRIREVTG--GIPIGFKLSANHVE-QDIQFALEASADYLILDGRG 360 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVD 272 G + + RD S T +L AR Y + + I +GGLR D Sbjct: 361 GGTGAAPALFRDHISVA----------TIPALARARRYLDAQGQRDITLIITGGLRTPAD 410 Query: 273 ILKSIILGASLGGLASPFLKPA 294 +K++ LGA LA+ ++ Sbjct: 411 FVKALALGADGIALANAAIQAL 432 >gi|295134798|ref|YP_003585474.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Zunongwangia profunda SM-A87] gi|294982813|gb|ADF53278.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Zunongwangia profunda SM-A87] Length = 383 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 109/368 (29%), Gaps = 79/368 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ I RN + L R L S + E G K P IS + + + Sbjct: 35 CNENINIKRNTDEIREIQLKPRYLKNYSNSK--LETELFGIKYDAPFGISPI---GLQGL 89 Query: 73 ERIN--RNLAIAAEKTKVAMAVGS-------------------QRVMFSDHNAIKSFELR 111 N LA A+ K + + + Q ++ R Sbjct: 90 MWPNAPEILAKASLKHNIPFILSTVTTTSIERASELTEGRAWFQLYHPTEDWLRDDILKR 149 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA----DGLFLHLNP---LQEI----- 159 A ++ L V + + ++ + + + L + P LQ + Sbjct: 150 AEAAEVPVLVILCDV-PTFGYRPKEIRNGLAMPPQMNFRNVLQVMGKPAWALQTLKHGAP 208 Query: 160 -------IQPNGNT----------NFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDI 200 G + F+ KI L L+LK V +S D+ Sbjct: 209 NFATMKKYMDKGMSIKQLGAWMNATFSGRLNEEKIKPLRDLWKGKLVLKGV---VSDEDV 265 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 E ++ G ++ GG ES S+I ++D Sbjct: 266 EEAIRLGFDGIIVSNHGGRQLDAGESTIKPLSNIAEKYKD-----------------RIT 308 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLL 319 + G+R+G DI + + GA L F+ I L+ + + + Sbjct: 309 VMMDSGIRSGPDIARVMSSGADFSFLGRSFMYGVGALGDQGGDHTIAMLKMQLQQVLEQV 368 Query: 320 GTKRVQEL 327 ++V +L Sbjct: 369 CCEKVTDL 376 >gi|269968812|ref|ZP_06182798.1| putative glutamate synthetase [Vibrio alginolyticus 40B] gi|269826562|gb|EEZ80910.1| putative glutamate synthetase [Vibrio alginolyticus 40B] Length = 466 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 108/293 (36%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVEFL-------GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E + +L+ PLL+S M+ G +I LA AE + G Sbjct: 112 LEDVPVSTELIVGPNARKPLRLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 169 Query: 94 SQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A S + A + N+ A G + A + Sbjct: 170 -EGGMLPEEQAANSRYFYELASAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNV 228 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 229 GKISQVRGIPEGQPAISPPTFKDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 285 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L +G Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 286 DIQFALDAGADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 335 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR D +K++ LGA +A+ AM S V A I Sbjct: 336 KGASDRVTLIITGGLRVPTDFVKALALGADGVAIAN----SAMQSIGCVAARI 384 >gi|150401723|ref|YP_001325489.1| glutamate synthase (NADPH) [Methanococcus aeolicus Nankai-3] gi|150014426|gb|ABR56877.1| Glutamate synthase (NADPH) [Methanococcus aeolicus Nankai-3] Length = 510 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 97/334 (29%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL P++I M+ G + + +A A ++ M G + S + + + Sbjct: 173 KLETPIMIGHMSYGALSLNAH--QAMARAVKECGTFMGTGEGGLHRSIYPYADN--VITQ 228 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----------GLFLHLNPLQEIIQPN 163 N + ++ A +G L + + I P Sbjct: 229 VASGRFGVNEEYLSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPA 288 Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ S VP+ +K + S I G G Sbjct: 289 PHHDIYSIEDLAQLVRSLKEATRWKVPVFVKISAVHNVAAIANGIATSDADAVVIDGFKG 348 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + + RD + GIP L++ NE IASGG+RN D Sbjct: 349 GTGAAPKVFRD----------NVGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSAD 398 Query: 273 ILKSIILGASLGGLASPFLKP------------------------------AMDSSDAVV 302 + K I LGA + + + + + V Sbjct: 399 VFKLIALGADATYIGTAVMIAMGCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVA 458 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I + E + G ++ L N +R Sbjct: 459 NLINAWTHEIQELLGAAGINSIESLRGNRDRLRG 492 >gi|159040621|ref|YP_001539873.1| glutamate synthase (NADPH) [Caldivirga maquilingensis IC-167] gi|157919456|gb|ABW00883.1| Glutamate synthase (NADPH) [Caldivirga maquilingensis IC-167] Length = 741 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 64/341 (18%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------- 94 D + G +++ P+ I M+ G+ + N +A A++ + G Sbjct: 81 DLTTTISGIEVAAPIYIGDMSFGS--LSGVPNVVVAEVADELNLVAGTGEGGLHPDVAKH 138 Query: 95 QRVMFSDHNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFL 151 +R+ +A ++ ++ +G + K + ++ + + Sbjct: 139 RRIFVQWASARFGVDIDVLMRGLGIVIKIGQGAKPGIGGHLPGSKVTGVISMVR--RIPI 196 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 ++ L + + DL +I L A P+L+K + + G Sbjct: 197 GVDALSPAPHHDI-YSIEDLKQRIDALKEATGKPVLVKIAATNYAPYIAVGIARMGADGV 255 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASG 265 I G G + + + +D + G+P L++ +E IASG Sbjct: 256 IIDGHGAGTGAAPQVVKD----------NVGVPIELAIASVDKMLRREGLRDEVTVIASG 305 Query: 266 GLRNGVDILKSIILGASLGGLASPFL----------------------KPAMDS------ 297 + + D K + LGA L + L + A S Sbjct: 306 RVSSADDAAKIMALGADAVALGTSVLNSMGCIMARTCHTGNCPAGITSRLADGSVVVDHD 365 Query: 298 --SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 AV+ +++ + E + + LG + V+EL L++ Sbjct: 366 LAKRAVMNYLKAFQVELGLILDNLGLRSVRELVGRRDLLKG 406 >gi|289432857|ref|YP_003462730.1| glutamate synthase (NADPH) [Dehalococcoides sp. GT] gi|288946577|gb|ADC74274.1| Glutamate synthase (NADPH) [Dehalococcoides sp. GT] Length = 500 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSF 108 K+ PL+ S+M+ G + ++R+LA AA+ G S + F D+ ++ Sbjct: 163 KIDVPLMFSAMSYGAISL--NVHRSLAQAAKNMGTMWNTGEGGLHSSLMEFKDNTIVQVA 220 Query: 109 ELRQYAPHTVLISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 R + L N G V++ G + H + AD + P+ + I P Sbjct: 221 SGRYGVQNDYL--NSGRIVEIKIGQGAKPGIGGHLPGEKVSADVSLTRMIPMGTDAISPA 278 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + L+ ++ VP+ +K + +++G I G G Sbjct: 279 PQHDIYSIEDLSQLIYGLKEATRYRVPISVKIAAVHNVAAIASGIVRAGADIVTIDGMRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + + RD + GIP L+L N+A + SGG+RN D Sbjct: 339 ATGAAPKVIRD----------NVGIPIELALAAVDSRLREEGIRNQASLVISGGIRNSGD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 + K+I LGA + + L + + Sbjct: 389 VFKAIALGADAVNIGTAALVALGCHLCQQCHTGKCSWGICTSDLALTKRINPEIGAKRLS 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + LG ++ L N +R Sbjct: 449 NLLRGWSLEIKDMLGGLGVNAIESLRGNRLHLRG 482 >gi|72087016|ref|XP_780619.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115690427|ref|XP_001202511.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 356 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 107/343 (31%), Gaps = 71/343 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------ 66 + + + K F + + R + E D + LG +S P+ + Sbjct: 35 AGRKWTYNDSFKAFGRYIIRPRIM--RDVGERDLATTVLGHPISIPVCAAPTALHVYSHP 92 Query: 67 -GNNKMIERINRN--LAIAAEK--TKVAMAVGS--------QRVMFSDHNAIKSFELRQY 113 G + + + L I + + T +A G+ Q +F + + +RQ Sbjct: 93 DGEKETAKGVKEAGSLMILSSEASTTIADVAGAAPGALRWMQTYIFKNRKHTEH-IVRQA 151 Query: 114 -------------APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 +P TV +L L G L D +H Sbjct: 152 ERAGFKAIVLTVDSPVTVNWDDLDDSFLAEGHGKTDPKYRCINLDIDLPEVH------AA 205 Query: 161 QPNGNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + +G+TN L S +P++ K + L++ +G Sbjct: 206 KASGDTNLTGYLPEQHNSPITWDDFKWLKSITSLPVVCKGI---LTAEGAREAADAGAAG 262 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++ GG + D S++ + ++ + GG+R+G Sbjct: 263 IIVSAHGGRQLDGAPAPIDALSEVVDAVRG----------------SDVEVYLDGGVRSG 306 Query: 271 VDILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEF 312 D+ K++ GA + P L A +D V + L E Sbjct: 307 NDVFKALGRGARAVFIGRPILWGLACGGADGVKRILTMLGNEL 349 >gi|73748837|ref|YP_308076.1| glutamate synthase, alpha subunit [Dehalococcoides sp. CBDB1] gi|73660553|emb|CAI83160.1| glutamate synthase, alpha subunit [Dehalococcoides sp. CBDB1] Length = 500 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSF 108 K+ PL+ S+M+ G + ++R+LA AA+ G S + F D+ ++ Sbjct: 163 KIDVPLMFSAMSYGAISL--NVHRSLAQAAKNMGTMWNTGEGGLHSSLMEFKDNTIVQVA 220 Query: 109 ELRQYAPHTVLISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 R + L N G V++ G + H + AD + P+ + I P Sbjct: 221 SGRYGVQNDYL--NSGRIVEIKIGQGAKPGIGGHLPGEKVSADVSLTRMIPMGTDAISPA 278 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + L+ ++ VP+ +K + +++G I G G Sbjct: 279 PQHDIYSIEDLSQLIYGLKEATRYRVPISVKIAAVHNVAAIASGIVRAGADIVTIDGMRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + + RD + GIP L+L N+A + SGG+RN D Sbjct: 339 ATGAAPKVIRD----------NVGIPIELALAAVDSRLREEGIRNQASLVISGGIRNSGD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 + K+I LGA + + L + + Sbjct: 389 VFKAIALGADAVNIGTAALVALGCHLCQQCHTGKCSWGICTSDLALTKRINPEIGAKRLS 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + LG ++ L N +R Sbjct: 449 NLLRGWSLEIKDMLGGLGVNAIESLRGNRLHLRG 482 >gi|329298100|ref|ZP_08255436.1| L-lactate dehydrogenase [Plautia stali symbiont] Length = 180 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLR 309 A + +A G+RNG+D+++ I LGA L F+ A V + + Sbjct: 77 DADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAFIYALATHGQRGVENLLSLVE 136 Query: 310 KEFIVSMFLLGTKRVQELYLNTAL 333 KE V+M L G K + ++ ++ + Sbjct: 137 KEMRVAMTLTGAKTIADITQDSLV 160 >gi|328470562|gb|EGF41473.1| putative glutamate synthetase [Vibrio parahaemolyticus 10329] Length = 513 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E +G KL+ PLL+S M+ G +I LA AE + G Sbjct: 159 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 216 Query: 94 SQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVL 144 + M + A S F A S L VQ + G Q A A + Sbjct: 217 -EGGMLPEEQAANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNV 275 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 276 GKISQVRGIPEGQPAISPPTFTDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 332 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 333 DIQFALDASADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 383 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|241998312|ref|XP_002433799.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215495558|gb|EEC05199.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 150 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 19/100 (19%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARP 254 D E +K G+ ++ GG + T +L E+ Sbjct: 66 GPEDAEEAIKHGVSAILVSNHGGRQLDGVP------------------STIEALPEVVGA 107 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + GG+R G D++K++ LGA + P L Sbjct: 108 VRGRVEVYLDGGVRRGTDVVKALALGAKAVFVGRPVLWGL 147 >gi|254437381|ref|ZP_05050875.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] gi|198252827|gb|EDY77141.1| FMN-dependent dehydrogenase superfamily [Octadecabacter antarcticus 307] Length = 366 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 102/355 (28%), Gaps = 76/355 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G N+ DD L R L + +V G+ + P IS M G N Sbjct: 31 AGREIGAVHNRAAIDDLKLRPRIL--RDVSDRSLAVPLFGRSANVPFGISPM-GMCNLSA 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----------------NAIKSFELRQYAP 115 + LA A + V + V + + + +F+L + A Sbjct: 88 PGADMMLARLAAREHVPLGVSTVASTAMEPLIEAAEGNAWFQLYFTGDGDGTFKLVERAK 147 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ------------------ 157 + + V + + + + + + P Q Sbjct: 148 AAGYETIILTVDV-----PEVGRRPRELRHGFTMPFKIGPRQFIDFALHPRWSLTALAKG 202 Query: 158 -------EIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 ++ + +A L L++K V L + D + +G Sbjct: 203 KPQMANFDMDGYEFDRTESRAKANWDTLAQLRDMWPGKLVVKGV---LDAQDALMLRDAG 259 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGG 266 + ++ G P L+L R + G Sbjct: 260 VDAIQVSSHGSRQLDSAP------------------PPILALADIRNAVGPDFPLFYDTG 301 Query: 267 LRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 LR G D++K+ GA+ L A + + + L+ E +++ +G Sbjct: 302 LRGGEDVVKAFEQGANFTFLGRVLQFAIAAAGEEGLADLWDVLKNETSITLAQIG 356 >gi|56695510|ref|YP_165858.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3] gi|56677247|gb|AAV93913.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3] Length = 371 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 94/345 (27%), Gaps = 68/345 (19%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 D L R L +S E V+ K P IS M G N + LA A + + Sbjct: 48 DIRLTPRVLRNVSRRE--LRVQLFDKLAVRPFGISPM-GMCNLSAPDADLMLARLAARDR 104 Query: 88 VAMAVGS-----QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG--------V 134 V V + + + F+L ++ L +G Sbjct: 105 VPHGVSTVASTDMETLLKASGGMAWFQL-YFSGDGSGTMKLVERARAAGYGTLVLTVDVP 163 Query: 135 QKAHQAVHVLGADGLFLHLNPLQ----------------------------EIIQPNGNT 166 + + + + + P Q + + Sbjct: 164 EVGRRPRELRHGFKMPFRIGPRQFVDFALHPRWSLSTLIRGRPQMANFDGRNYVFDRTES 223 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 A + L + L++K V L D G ++ G Sbjct: 224 RAAADWTTFETLRATWPGKLVVKGV---LHPGDALRLKALGADAIQVSSHGCRQLDAAP- 279 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 P +L R G+R+G D++K+ +GA Sbjct: 280 -----------------PAIEALAAIRQAVGPSYPLFYDSGIRSGEDVVKAYAMGADFVF 322 Query: 286 LASPFLKPAMDSSDAVVAAI-ESLRKEFIVSMFLLGTKRVQELYL 329 L P L +A + + E L +E +++ LG + L Sbjct: 323 LGRPLLYAMAAGGEAGLHQLWEVLAQEVSLTLAQLGLTEMAALRE 367 >gi|332796918|ref|YP_004458418.1| glutamate synthase [Acidianus hospitalis W1] gi|332694653|gb|AEE94120.1| glutamate synthase [Acidianus hospitalis W1] Length = 711 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 113/386 (29%), Gaps = 70/386 (18%) Query: 6 KIDHINIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEV----------DPSVEFLGKKL 55 KI+HI + + K D R L I F V + F G ++ Sbjct: 22 KIEHIRHL---ATTGKPYKILDKRRNSLRILDRIEFKNVEGKIVEKPLASTYLSFSGIEM 78 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 + PL + M+ G + N +A AA+ T G + + F A Sbjct: 79 TTPLYLGDMSYGA--LSGNPNIAIATAADLTGTLAGTGEGGLHPEVAKHKRIFVQWASAR 136 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNF 168 V I L A Q A + V A + + + I P + + Sbjct: 137 FGVDIDVLNAGLGVVIKIGQGAKPGIGGHLPGSKVTKAISMTRRIPEGIDAISPAPHHDI 196 Query: 169 ADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + +I L A P+ +K + G I G G + + E Sbjct: 197 YSIEDLGQRIEALKEATGKPVFVKVAATNYIPYITSGVARMGADGIIIDGHGAGTGATPE 256 Query: 226 SHRDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 RD + GIP + S+ ++ IA+G + + D K I L Sbjct: 257 VIRD----------NLGIPIELAVASADSVLKKEGLRDKFTIIAAGRISDATDAAKLIAL 306 Query: 280 GASLGGLASPFL-----------------KPAMDSSDA------------VVAAIESLRK 310 GA + + + L D +V + Sbjct: 307 GADIVSVGTAALIAMGCVMVHKCHIGSCPTALTSKIDGTRIFDIEFGVKTLVNFVNGFSL 366 Query: 311 EFIVSMFLLGTKRVQELYLNTALIRH 336 E + LG +QEL L+ Sbjct: 367 ELANILDNLGLSSIQELKGRRDLLYG 392 Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 8/89 (8%) Query: 255 YCNEAQFIA-SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS------DAVVAAIES 307 N+ IA S LR+ D+ K + LGA + L+ A+ + I Sbjct: 603 IRNKFDIIAKSSKLRDSADVFKLVALGADAVIMPYQILEIAIGEGSKGNLKERAFNLISG 662 Query: 308 LRKEFIVSMFLLGTKRVQ-ELYLNTALIR 335 ++KE + G VQ L N L+R Sbjct: 663 MKKEIALMAGAAGVYSVQSSLTGNRELLR 691 >gi|297180184|gb|ADI16405.1| glutamate synthase domain 2 [uncultured bacterium HF770_09N20] Length = 445 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 32/254 (12%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFEL 110 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 83 LELDIPIYITGMSFGALSYEAK--TALARGATMAGTATCSGEGGMIPDERRYSTKWLYQN 140 Query: 111 RQ----YAPHTVLISNLGAVQLNYD--FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 Q + P+ + +++ + G+ V L + P Sbjct: 141 IQSRYGFNPNHLRLADACEFFIGQGCKVGLGGHLMGQKVTDQVAEMRSLPAGIDQRSPAR 200 Query: 165 NTNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + ++ KI + A + +P+ LK +G D+ + K+G + G G+ Sbjct: 201 HPDWLGPDDLALKIEEIREATNWEIPIQLK-LGAARVYDDVRMAAKTGPDSIYMDGMEGS 259 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGVDI 273 + + + +D G+P ++ AR ++ + +GG+RNG D+ Sbjct: 260 TGAGP----------HLATEDTGVPGIAAIRQARRALDDVGKSGEISLVYAGGIRNGSDV 309 Query: 274 LKSIILGASLGGLA 287 K++ LGA + Sbjct: 310 AKALALGADAVAIG 323 >gi|57234074|ref|YP_181843.1| glutamate synthase, alpha subunit, putative [Dehalococcoides ethenogenes 195] gi|57224522|gb|AAW39579.1| glutamate synthase, alpha subunit, putative [Dehalococcoides ethenogenes 195] Length = 500 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSF 108 K+ P++ S+M+ G + ++R+LA AA+ G S + F D+ ++ Sbjct: 163 KIDVPVMFSAMSYGAISL--NVHRSLAQAAKNMGTMWNTGEGGLHSSLMEFKDNTIVQVA 220 Query: 109 ELRQYAPHTVLISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 R + L N G V++ G + H + AD + P+ + I P Sbjct: 221 SGRYGVQNDYL--NSGRIVEIKIGQGAKPGIGGHLPGEKVSADVSLTRMIPMGTDAISPA 278 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + L+ ++ VP+ +K S +++G I G G Sbjct: 279 PQHDIYSIEDLSQLIYALKEATHYRVPISVKIAAVHNVSAIASGIVRAGADIVTIDGMRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + + RD + GIP L+L N+A + SGG+RN D Sbjct: 339 ATGAAPKVIRD----------NVGIPIELALAAVDSRLREEGIRNQASLVISGGIRNSGD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 + K+I LGA + + L + + Sbjct: 389 VFKAIALGADAVNIGTAALVALGCHLCQQCHTGKCAWGICTSDLALTKRINPEIGAKRLT 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + LG ++ L N +R Sbjct: 449 NLLRGWSLEIKDMLGGLGVNAIESLRGNRLHLRG 482 >gi|307353409|ref|YP_003894460.1| glutamate synthase [Methanoplanus petrolearius DSM 11571] gi|307156642|gb|ADN36022.1| Glutamate synthase (NADPH) [Methanoplanus petrolearius DSM 11571] Length = 503 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 108/358 (30%), Gaps = 74/358 (20%) Query: 35 ALPEISFDEVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 AL + E D + KL P++I M+ G + ++ ++A A + M G Sbjct: 146 ALEKTKSGECDLKTKLSPNLKLETPIMIGHMSYGAISLNAQL--SMAKAVSEMGTFMGTG 203 Query: 94 SQRVMFSDHNAIKSFELRQYAPHTVLISN-----------LG---AVQLNYDFGVQKAHQ 139 + + ++ + + N +G + +K + Sbjct: 204 EGGLHKKLYPYQDHMIVQVASGRFGVDINYLERGAAIEIKIGQGAKPGIGGHLPGEKVEE 263 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCG 194 V L + I P + + + L+ S P+ +K Sbjct: 264 EVSKTRMVPL------HSDAISPAPHHDIYSIEDLAQLVRSLKEATEWKKPVFVKIAAVH 317 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-- 252 + +S + G G + + RD GIP ++ Sbjct: 318 NVAAIAAGIARSSADVVVVDGFRGGTGAAPRVFRDH----------VGIPIEAAIAAVDD 367 Query: 253 ----RPYCNEAQFIASGGLRNGVDILKSIILGASLG------------------------ 284 + NE +ASGG+R+ D+ K+I LGA Sbjct: 368 KLRQQGIRNEVSLVASGGIRDSADLTKAIALGADAVYIGTAALIAMGCRVCGSCYRGLCP 427 Query: 285 -GLA--SPFLKPAMDSSDA---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 G+A P L ++ +A V I+ E M G ++ L N +R Sbjct: 428 WGIATQKPELVSRINPDEASKNVANLIKGWTLELAELMGAAGINSLESLRGNRDRLRG 485 >gi|217072538|gb|ACJ84629.1| unknown [Medicago truncatula] Length = 91 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSM 316 + GG+R G D+ K++ LGAS + P + A D V ++ LR EF ++M Sbjct: 3 KFPVFLDGGVRRGTDVFKALALGASGVFIGRPVVFSLAADGEAGVRKVLQILRDEFELTM 62 Query: 317 FLLGTKRVQELYLNTAL 333 L G + ++E+ + Sbjct: 63 ALCGCRSLKEISRAHVV 79 >gi|323218232|gb|EGA02943.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] Length = 95 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRK 310 A+ I G+R G + K++ GA + + P L + + V + IE L K Sbjct: 6 AKVVNKRVPVIFDSGVRRGSHVFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNK 65 Query: 311 EFIVSMFLLGTKRVQELYLNTALIRHQ 337 E ++M L G + ++++ L + Sbjct: 66 ELTINMMLGGARNIEQVKTTRLLTEKE 92 >gi|256810149|ref|YP_003127518.1| Glutamate synthase (NADPH) [Methanocaldococcus fervens AG86] gi|256793349|gb|ACV24018.1| Glutamate synthase (NADPH) [Methanocaldococcus fervens AG86] Length = 510 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 99/337 (29%), Gaps = 67/337 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDH 102 KL P++I+ M+ G + + + A A ++ M G Sbjct: 171 NLKLDTPIMIAHMSYGALSLNAHL--SFAKAVKECGTFMGTGEGGLPKPLYPYADHIITQ 228 Query: 103 NAIKSFELRQYA--PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 A F + + + +G G + + A + + + I Sbjct: 229 VASGRFGVNEEYLMKGAAIEIKIGQGAKPGIGGHLPGEKVTAEISATRM---IPEGSDAI 285 Query: 161 QPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + + + L+ S P+ +K + S I G Sbjct: 286 SPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVIDG 345 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + + RD GIP +++ NE IASGG+R Sbjct: 346 YRGGTGAAPKVFRDH----------VGIPIEMAIAAVDQRLREEGLRNEISIIASGGIRC 395 Query: 270 GVDILKSIILGASLG-------------------------GLA--SPFLKPAMD---SSD 299 D+ K+I LGA G+A P L +D + Sbjct: 396 SADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQKPELVKRLDPEVGAK 455 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V I++ E + G ++ L N +R Sbjct: 456 RVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|28900621|ref|NP_800276.1| putative glutamate synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|28809001|dbj|BAC62109.1| putative glutamate synthetase [Vibrio parahaemolyticus RIMD 2210633] Length = 513 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E +G KL+ PLL+S M+ G +I LA AE + G Sbjct: 159 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 216 Query: 94 SQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVL 144 + M + A S F A S L VQ + G Q A A + Sbjct: 217 -EGGMLPEEQAANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNV 275 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 276 GKISQVRGIPEGQPAISPPTFTDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 332 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 333 DIQFALDASADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 382 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 383 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 431 >gi|222109745|ref|YP_002552009.1| (s)-2-hydroxy-acid oxidase [Acidovorax ebreus TPSY] gi|221729189|gb|ACM32009.1| (S)-2-hydroxy-acid oxidase [Acidovorax ebreus TPSY] Length = 375 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 101/314 (32%), Gaps = 51/314 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTK---------------VA 89 + G L PLL++ + + ++ A AA+ T +A Sbjct: 76 TRLTLGGLDLPHPLLLAPVA--HQRLAHSEAEVATARAAQATGTCLVASTLSSCTLEAIA 133 Query: 90 MAVGSQR--VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 A G R ++ + L + A + + + + + A QA V+ AD Sbjct: 134 GAAGPARWFQLYLQPEREHTLALLRRAEAAGYRAIVLTLDASIQLASRSALQAGFVMPAD 193 Query: 148 ----GLFLHLNPLQEIIQPNGNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSS 197 L + P ++ + + F + L +P+ +K V + S Sbjct: 194 CTPANLAAYPPPAPPVLGADDSRIFQGAMRHAPTWDDLRWLLGETRLPVWIKGV---MHS 250 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D +G ++ GG S + +P + Sbjct: 251 DDARALQAAGAAGLIVSNHGGRSLDGAPASLHR------------LPAVRA-----AVGE 293 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + GG+R+G D K++ LGA + A+ + V ++ L +E M Sbjct: 294 GYPVLLDGGVRSGADAFKALALGADAVLIGRLQMYALAVAGALGVAHMLQLLTEELHACM 353 Query: 317 FLLGTKRVQELYLN 330 G ++ ++ N Sbjct: 354 AQAGCAQLCDITPN 367 >gi|332705014|ref|ZP_08425099.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] gi|332356191|gb|EGJ35646.1| alpha-hydroxy acid dehydrogenase [Lyngbya majuscula 3L] Length = 107 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 18/123 (14%) Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + D ++ N + GG+R G D+L Sbjct: 2 NHGGRQLDSAIASIDALPEV-----------------VAAVGNYLPVLIDGGIRRGTDVL 44 Query: 275 KSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K++ LGAS + P L A+ V ++ LR E ++M L G +V+++ L+ Sbjct: 45 KALALGASAVLVGHPVLWGLAVAGVAGVRHVLQLLRDELHIAMVLSGCTKVKDIDLSFVK 104 Query: 334 IRH 336 I+H Sbjct: 105 IKH 107 >gi|146304632|ref|YP_001191948.1| glutamate synthase (NADPH) GltB2 subunit [Metallosphaera sedula DSM 5348] gi|145702882|gb|ABP96024.1| glutamate synthase (NADPH) GltB2 subunit [Metallosphaera sedula DSM 5348] Length = 712 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 92/310 (29%), Gaps = 39/310 (12%) Query: 7 IDHIN-IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEV--------DPSVEFLGKKLSF 57 ++HI + ++ ++ R E E D V F G +S Sbjct: 24 LEHIRQLALTGEPYQIFTSRRNNLRILDRV--EFRVAETKITREPSADTRVSFSGISMSS 81 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL + M+ G + N +A AA+ T G + + F A Sbjct: 82 PLYLGDMSYGA--LSGTPNIAIAEAADITGTLAGTGEGGLHPEVAKHKRIFVQWASARFG 139 Query: 118 VLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 V + L A Q A + V + + I P + + Sbjct: 140 VDVDVLNAGLGVVIKIGQGAKPGIGGHLPGSKVTEPISKTRRIPVGMDAISPAPHHDIYS 199 Query: 171 LSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +I L P+ +K + + I G G + + Sbjct: 200 IEDLGQRIEALKELTGKPVFVKVAATNYIPYVVSGIARMKADGVIIDGHGAGTGATPAVI 259 Query: 228 RDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 RD + GIP + S+ + IA+G + + D K I LGA Sbjct: 260 RD----------NVGIPIELAVSSADSVLKREGLRDNFTIIAAGRVGDATDAAKLIALGA 309 Query: 282 SLGGLASPFL 291 + + + L Sbjct: 310 DVVSVGTGAL 319 >gi|241247160|ref|XP_002402761.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215496390|gb|EEC06030.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 321 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 104/315 (33%), Gaps = 57/315 (18%) Query: 55 LSFPLLI--SSMTGGNNKMIERINRN-LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 L P+ I S+M K+ +A AA+K M + + + + E+R Sbjct: 22 LQVPVGIAPSAM----QKLAHPQGEKAMARAAQKAGSVMILSTLSTISLE-------EVR 70 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP------LQEIIQP--- 162 Q AP L L V + Q +A G + L L ++ + +I Sbjct: 71 QAAPKANLWLQL-YVFKDRQITRQLVRRA-EKAGYNALVLTVDVPRFGHRVSDIRNHFSL 128 Query: 163 --NGNTNFADLSSKIALLSSAMDVPL---------------LLKEVGCGLSSMDIELGLK 205 + + ++ + P + KE E+ Sbjct: 129 PTHLRRCIDKIHHRLKQIPRHFGEPFGAFDYVPEPADTKARVTKESTFETRRRVWEMACM 188 Query: 206 SGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIA 263 ++G GT I + +LE + W I L E+ Sbjct: 189 LSASADVVSGVTKGT--PGIRHYEELE------VKKWAI---EVLPEVVAAVGKHMDIYL 237 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 GG+ G D++K++ +GA + P L V E ++E ++ L+G + Sbjct: 238 DGGVMYGTDVIKALAIGAKAVFVGRPALWSLSYKGQKGVTKMFEIFKEEIDRTLALMGCR 297 Query: 323 RVQELYLNTALIRHQ 337 ++L + ++R + Sbjct: 298 STRKLDPS-VVVRRE 311 >gi|114769365|ref|ZP_01446991.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [alpha proteobacterium HTCC2255] gi|114550282|gb|EAU53163.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [alpha proteobacterium HTCC2255] Length = 381 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 27/168 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + ++ L D +++K V S+ D G ++ G + Sbjct: 237 WNYLSELRDEWDGHIIVKGVT---SAHDASKLKDVGADAVWVSNHSGRQFDG-------- 285 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G + +L R + I G+ G+DIL++I LGA+ L F Sbjct: 286 ----------GQSSIETLPGIRKAVGDSFPLIFDSGVEGGLDILRAIALGANFVMLGRAF 335 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL-YLNTALIRH 336 A L + +M+ +G ++EL + +I+ Sbjct: 336 HYALAALGKKGFEQMAFILSDDINTNMYQMG---IEELSQSSDRIIKR 380 >gi|270308335|ref|YP_003330393.1| glutamate synthase-like protein, gltB-like fragment [Dehalococcoides sp. VS] gi|270154227|gb|ACZ62065.1| glutamate synthase-like protein, gltB-like fragment [Dehalococcoides sp. VS] Length = 500 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSF 108 K+ P++ S+M+ G + ++R+LA AA+ G S + F D+ ++ Sbjct: 163 KIDVPVMFSAMSYGAISL--NVHRSLAQAAKNMGTMWNTGEGGLHSSLMEFKDNTIVQVA 220 Query: 109 ELRQYAPHTVLISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPN 163 R + L N G V++ G + H + AD + P+ + I P Sbjct: 221 SGRYGVQNDYL--NSGRIVEIKIGQGAKPGIGGHLPGEKVSADVSLTRMIPMGTDAISPA 278 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + L+ ++ VP+ +K S +++G I G G Sbjct: 279 PQHDIYSIEDLSQLIYALKEATRYRVPISVKIAAVHNVSAIASGIVRAGADIVTIDGMRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + + RD + GIP L+L N+A + SGG+RN D Sbjct: 339 ATGAAPKVIRD----------NVGIPIELALAAVDSRLREEGIRNQASLVISGGIRNSGD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 + K+I LGA + + L + + Sbjct: 389 VFKAIALGADAVNIGTAALVALGCHLCQQCHTGKCAWGICTSDLALTKRINPEIGAKRLS 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + LG ++ L N +R Sbjct: 449 NLLRGWSLEIKDMLGGLGVNAIESLRGNRLHLRG 482 >gi|301648236|ref|ZP_07247982.1| putative L-lactate dehydrogenase [Escherichia coli MS 146-1] gi|301073673|gb|EFK88479.1| putative L-lactate dehydrogenase [Escherichia coli MS 146-1] Length = 327 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 104/339 (30%), Gaps = 78/339 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMIE 73 + N+ R + + LG+ ++ P+ I+ TG + E Sbjct: 13 EYSYRANEADLRRLEFRQRV--AVDIAGRSTATVILGQAVTMPMAIAPTGLTGMIHPDGE 70 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------FEL-----RQYAPHTVLIS- 121 + A AA++ + + + + + A + F+L R + + + + Sbjct: 71 ILA---ARAAKRFGIPFTLSTMSICSMETVAQATDYHPFWFQLYVMRDRHFVENLIDRAK 127 Query: 122 --NLGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPN--------GNTNFA 169 N GA+ + D V Q+ + L N L ++P N NF Sbjct: 128 AVNCGALVVTMDLQVFGQRHKDIKNGLSTPPKMTLRNLLDIAVKPRWCRNMLATRNRNFG 187 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ I + L++K + + D L Sbjct: 188 NIIGHASGVDNIDAMVEWTAQQFDPRLSWQDIEWIKQRWGGKLIVKGI---MDVEDARLA 244 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + +G ++ GG + S L +I + + Sbjct: 245 VAAGADALIVSNHGGRQLDGVSSSITLLPEI-----------------VSAVGDRIEVHF 287 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAV 301 GG+R+G D+LK+I LGA + L + V Sbjct: 288 DGGIRSGQDVLKAIALGAKGTYIGRSMLYGLGALGEEGV 326 >gi|254460673|ref|ZP_05074089.1| L-lactate dehydrogenase, FMN linked [Rhodobacterales bacterium HTCC2083] gi|206677262|gb|EDZ41749.1| L-lactate dehydrogenase, FMN linked [Rhodobacteraceae bacterium HTCC2083] Length = 393 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 87/378 (23%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEV--DPSVEFLGKKLSFPLLISS--MTG----- 66 + RN+ D+ ++ L E+ D SV+FLG L P I+ M+G Sbjct: 36 EASKARNRTKLDEVLMMPSVLHG----EITPDLSVDFLGHTLPLPFGIAPLGMSGLIWPN 91 Query: 67 -----GNNKMIERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 + I L+ A +T +A ++G + +R+ V Sbjct: 92 AETILASKAATLDIPYTLSTVATRTPEDIAPSLGQHGWFQLYPPRDEG--IRRDMLERVK 149 Query: 120 ISNLGAVQLNYDFGVQKAHQA--------------------------------VHVLGAD 147 + + L D V + + + Sbjct: 150 ANGFHTLVLTVDVPVASRRERQIRGGLRQPPKITPRLLAQIALCPAWALGTARLGMPRMR 209 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKI-------ALLSSAMDVPLLLKEVGCGLSSMDI 200 L +++ +++ + +T + L D L+LK V L D+ Sbjct: 210 TLDKYIDQVKDAGEERSSTAHIGYLLRTSPDWEYVHWLRDNWDGKLILKGV---LDVRDV 266 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +GI ++ G + + ++ I + Sbjct: 267 TKSEATGIDALWLSNHAGRQFDAAPAPIEVLPKI-------------------RAATKLP 307 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLL 319 I G+ G+DIL++ LGA L + + L + +M L Sbjct: 308 LIMDSGIEGGLDILRAYALGADFVMLGRAWHYALGALGEQGPAHLADMLASDLRANMGQL 367 Query: 320 GTKRVQELYLNTALIRHQ 337 G + +L+ I Q Sbjct: 368 G---LTQLHDAPQTILPQ 382 >gi|156937202|ref|YP_001434998.1| ferredoxin-dependent glutamate synthase [Ignicoccus hospitalis KIN4/I] gi|156566186|gb|ABU81591.1| ferredoxin-dependent glutamate synthase [Ignicoccus hospitalis KIN4/I] Length = 717 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 94/270 (34%), Gaps = 56/270 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL P+LI +M+ G+ + + + LA AA + +A G ++ + ++ Sbjct: 372 LKLKAPILIGAMSFGS--VSKEVKVALAKAAGRLGIAANTGEGGMLPEERKYASVLIVQY 429 Query: 113 YAPHTVLISN-------------------LGAVQLNYDFGVQKAHQAVHVLGADGL--FL 151 + + ++ +G + L A +GAD + Sbjct: 430 ASGRFGVSASYLRAGDAVEIKIGQGAKPGMGGLLLGEKVTEDIAKMRGIPVGADAISPAR 489 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 HL+ I+ P + +I VP+++K G + D+++ K+G Sbjct: 490 HLD----IVGPEDLKMKIEQLREITD----WKVPIIVKY-AAGRVADDVKIAAKAGADII 540 Query: 212 DI----AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQF 261 I +G G T + E G T + A +E Sbjct: 541 VIDGKPSGTGATPYIVTEHT--------------GYATMAATVEAHRALKEIGMRDEVSL 586 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL 291 + GG++ G D K + LGA +AS L Sbjct: 587 VVGGGIKTGADAAKVLALGADAVMIASSTL 616 >gi|186470713|ref|YP_001862031.1| ferredoxin-dependent glutamate synthase [Burkholderia phymatum STM815] gi|184197022|gb|ACC74985.1| ferredoxin-dependent glutamate synthase [Burkholderia phymatum STM815] Length = 455 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + P+ +K VG + D++L + +G + G +G Sbjct: 204 RHPDWTGPDDLQIKILELREMTDWQTPIYVK-VGATRTFNDVKLAVHAGADVIVVDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT+ ++ ++ GIPT +L A + Q I SGG+R+G Sbjct: 263 GTAATQT-----------CFIENVGIPTLAALRQAVDALEDLNMKGQVQLIISGGIRSGA 311 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ +GA + L Sbjct: 312 DVAKALAMGADAVAIGQGVL 331 >gi|296399046|gb|ADH10363.1| N-methyl glutamate synthase large subunit C [Methyloversatilis universalis FAM5] Length = 454 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSS---KIALLSS--AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ KI L + P+ +K VG + D++L + +G + G +G Sbjct: 204 RHPDWTGPDDLAIKIQELRELTDWEKPIYVK-VGATRTFNDVKLAVHAGADVVVVDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT+ ++ + GIPT ++ A + Q I SGG+R+G Sbjct: 263 GTAATQT-----------CYIEHIGIPTLAAVRQAVDALEDLNMKGQVQLIVSGGIRSGA 311 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ +GA + L Sbjct: 312 DVAKALAMGADAVAIGQGILYAL 334 >gi|218672229|ref|ZP_03521898.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli GR56] Length = 543 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 21/128 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A + PL++K + L D +G ++ GG S + Sbjct: 189 WADVAWIKEQWGGPLIIKGI---LDPEDARAAADTGADAIVVSNHGGRQLDGAPSSISML 245 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF- 290 I + + GG+R+G D+LK+I LGA + SP Sbjct: 246 PSI-----------------VDAVGDRIEIHLDGGIRSGQDVLKAIALGAKGTYIFSPLP 288 Query: 291 LKPAMDSS 298 L+P Sbjct: 289 LRPRRHGQ 296 >gi|254000122|ref|YP_003052185.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. SIP3-4] gi|313202085|ref|YP_004040743.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. MP688] gi|253986801|gb|ACT51658.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. SIP3-4] gi|312441401|gb|ADQ85507.1| ferredoxin-dependent glutamate synthase [Methylovorus sp. MP688] Length = 444 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K VG D+ L +K+G + G G Sbjct: 203 RHPDWTGPDDLEIKIAELREITDWEKPIYVK-VGATRPYFDVTLAVKAGADVVVLDGMQG 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIPT ++ A + Q I SGG+RNG D Sbjct: 262 GTAATQEVFIEH----------VGIPTLAAIRPAVQALQDMGMHRKVQLIVSGGIRNGAD 311 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + ++L Sbjct: 312 VAKALALGADAVAIGTAALVALGDNDPRLESEYQAL 347 >gi|317501477|ref|ZP_07959675.1| glutamate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088051|ref|ZP_08336972.1| hypothetical protein HMPREF1025_00555 [Lachnospiraceae bacterium 3_1_46FAA] gi|316897106|gb|EFV19179.1| glutamate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409007|gb|EGG88466.1| hypothetical protein HMPREF1025_00555 [Lachnospiraceae bacterium 3_1_46FAA] Length = 501 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 108/334 (32%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P++ S+M+ G+ ++LA+AA++ + G + + ++ Sbjct: 163 LELSMPVMFSAMSYGSISYNAH--KSLALAAKELGILYNTGEGGLHEDFYCYGENTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + + + + Q G+ ++G + + I P Sbjct: 221 ASGRFGVHEKYLNAGAGIEIKMGQ-GAKPGIGGHLPGTKIVGDVSRTRMIPEGSDAISPA 279 Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ S P+++K + +SG I G G Sbjct: 280 PHHDIYSIEDLRQLVCSLKEATEYKKPIIVKVAAVHNIAAIASGIARSGADIIAIDGFRG 339 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N +A G +R+ D Sbjct: 340 GTGAAPTRIRD----------NVGIPVELALAAVDQRLRDEGIRNHVSLVAGGSIRSASD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K++ LGA +A+ L S ++ Sbjct: 390 VVKAVALGADACYVATAALLALGCHLCRTCQSGKCNWGIATQNPELVERLDPQTGSRRLI 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E M +G ++ L N ++R Sbjct: 450 NLMTAWKHEIKELMGGMGINSIEALRGNRLMLRG 483 >gi|169335426|ref|ZP_02862619.1| hypothetical protein ANASTE_01838 [Anaerofustis stercorihominis DSM 17244] gi|169258164|gb|EDS72130.1| hypothetical protein ANASTE_01838 [Anaerofustis stercorihominis DSM 17244] Length = 507 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 108/333 (32%), Gaps = 63/333 (18%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 KL+ P++ S+M+ G+ +LA AA + G + + K+ ++ Sbjct: 170 KLNVPIMFSAMSYGSISYNAH--ESLARAASELGTMYNTGEGGLHEDFYKYGKNTIVQVA 227 Query: 114 APHTVL---ISNLG-AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQEIIQPNGN 165 + + N G A+++ G + H +G D + P + I P + Sbjct: 228 SGRFGVHKDYLNTGSAIEIKMGQGAKPGIGGHLPGEKIGPDISKTRMIPEGSDAISPAPH 287 Query: 166 TNFADLSSKIALLSSAMD------VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + L ++ P+++K + +SG I G G Sbjct: 288 HDIYSIED-LRQLVLSLKEATNYEKPVIVKIAAVHNVAAIASGVARSGADIIAIDGFRGG 346 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVDI 273 + + RD + GIP L+L N + G +R+ D+ Sbjct: 347 TGAAPTRIRD----------NVGIPIELALASVDSRLRNEGIRNNVSLVVGGSIRSSADV 396 Query: 274 LKSIILGASLGGLASPFLKPA------------------------------MDSSDAVVA 303 +K+I LGA +A+ L VV Sbjct: 397 VKAIALGADCVYIATSALMALGCHLCRNCHSGKCNWGIATQRPDLVKRLNPDIGYKRVVN 456 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + E M +G ++ L N ++R Sbjct: 457 LVTAWEHEIKEMMGGMGINSIEALKGNRLMLRG 489 >gi|94984733|ref|YP_604097.1| lactate 2-monooxygenase [Deinococcus geothermalis DSM 11300] gi|94555014|gb|ABF44928.1| Glycolate oxidase [Deinococcus geothermalis DSM 11300] Length = 423 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 22/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 ++ L +P+LLK + L D + G+ ++ GG R ++ Sbjct: 277 WDDVSRLREWTHLPILLKGI---LHPDDAREAARRGVNGLIVSNHGG---------RQID 324 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +IG + +L + + G+R G D+ K++ LGA L P+ Sbjct: 325 GEIGAL---------DALPGVVAAAGDLPVLLDSGVRTGSDVAKALSLGARAVLLGRPYA 375 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A+ V I ++ EF +++ LLG +EL Sbjct: 376 YGLALAGETGVREVIRNVVAEFDLTLGLLGVGAAREL 412 >gi|84386711|ref|ZP_00989737.1| glutamate synthase domain protein [Vibrio splendidus 12B01] gi|84378517|gb|EAP95374.1| glutamate synthase domain protein [Vibrio splendidus 12B01] Length = 520 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 39/258 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ L +S M+ G+ +I +LA AE + G + M + A S + Sbjct: 181 LKLNISLFVSDMSFGSLSEEAKI--SLATGAELAGTGICSG-EGGMLPEEQAANSRYFYE 237 Query: 113 YAP-----HTVLISNLGAVQLNYDFGVQ-----------KAHQAVHVLGADGLFLHLNPL 156 A + N+ A G + + V G + ++P Sbjct: 238 LASAQFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGAKNIGKIAEVRGIEAGTAAISPP 297 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + +F + + ++ ++ +P+ K + DI+ L + Y + GR Sbjct: 298 T-FVDLKTVEDFKNFADRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGR 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNG 270 GG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 354 GGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKQGVSDRVTLIITGGLRVP 403 Query: 271 VDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 404 MDFVKAMALGADGVAISN 421 >gi|110680957|ref|YP_683964.1| L-lactate dehydrogenase (cytochrome), putative [Roseobacter denitrificans OCh 114] gi|109457073|gb|ABG33278.1| L-lactate dehydrogenase (Cytochrome), putative [Roseobacter denitrificans OCh 114] Length = 367 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 98/355 (27%), Gaps = 68/355 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 RN D L R L ++ D V+ P IS M G N Sbjct: 31 AGNGVAEARNLAALRDVELQPRVLRNVARR--DIGVQVFEHAGQAPFGISPM-GMCNLSG 87 Query: 73 ERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A K +V + V S M + F+L ++ + L Sbjct: 88 PGADVMLARIAAKHQVPVGVSTVASTSLETMIEEAQGHAWFQL-YFSGDGSGTAKLVERA 146 Query: 124 ---GAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQ---------------------- 157 G L V + + + + + P+Q Sbjct: 147 KAAGYKTLIMTLDVPEVGRRPRELRRGFKMPFKIGPMQFIDFALHPRWSLSSLMAGAPDL 206 Query: 158 ------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 E + A + L + D L+ K V +D G+ Sbjct: 207 ANFQTPEFTFDRTESRAAADWDFLKRLRDSWDGHLVAKGVT---DVVDALRLKAQGVDAI 263 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNG 270 ++ GG P L+L+ R + G+R+G Sbjct: 264 QVSTHGGRQLDSAP------------------PPILALKRIRDAIGPQYPLFYDTGMRSG 305 Query: 271 VDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 D++K+ +GA A D + + L E +++ +G + Sbjct: 306 EDVVKAYQMGADFVFFGRAMQFAIAAGGRDGLAQYWDLLADEVSLTLAQMGLTTL 360 >gi|87118355|ref|ZP_01074254.1| putative glutamate synthetase [Marinomonas sp. MED121] gi|86165989|gb|EAQ67255.1| putative glutamate synthetase [Marinomonas sp. MED121] Length = 515 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 37/257 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G + LA+ AE + G + M + S + Sbjct: 179 LKLYIPLFVSDMSFGALSEEAK--TALAMGAELAGTGICSG-EGGMLPEEQTANSRYFYE 235 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFLHLNP-LQEIIQP- 162 A L+ + A G + H + + P Q + P Sbjct: 236 LASAGFGYQEELLKKVQAFHFKGGQGAKTGTGGHLPGNKNKGKISQVRGIPEGQPAVSPP 295 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + +F + ++ ++ +P+ K + + D++ L +G Y + GRG Sbjct: 296 TFKELHSLDDFKRFADRVREVTQ--GIPIGFKLSANHIEA-DMQFALDAGADYIILDGRG 352 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + E RD S +PT +L AR +E I +GG+R + Sbjct: 353 GGTGAAPEMFRDHIS----------VPTIPALARARRLLDEQGKSGQVTLIITGGIRTPI 402 Query: 272 DILKSIILGASLGGLAS 288 D +K++ LGA +++ Sbjct: 403 DFVKAMALGADGVAVSN 419 >gi|163734681|ref|ZP_02142120.1| L-lactate dehydrogenase (Cytochrome), putative [Roseobacter litoralis Och 149] gi|161392174|gb|EDQ16504.1| L-lactate dehydrogenase (Cytochrome), putative [Roseobacter litoralis Och 149] Length = 368 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 96/355 (27%), Gaps = 68/355 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 RN D L R L ++ D V+ P IS M G N Sbjct: 31 AGNGVAEARNLAALRDIELQPRVLRNVARR--DIGVQVFEHAGQAPFGISPM-GMCNLSG 87 Query: 73 ERINRNLAIAAEKTKVAMAVG-----SQRVMFSDHNAIKSFELRQYAPHTVLISNL---- 123 + LA A K +V + V S M + F+L ++ + L Sbjct: 88 PGADVMLARIAAKHQVPVGVSTVASTSLETMIEEAQGHAWFQL-YFSGDGSGTAKLVERA 146 Query: 124 ---GAVQLNYDFGVQKA-HQAVHVLGADGLFLHLNPLQ---------------------- 157 G L V + + + + + P+Q Sbjct: 147 KTAGYKTLIMTLDVPEVGRRPRELRRGFKMPFRIGPMQFIDFALHPRWSLSSLIAGAPDL 206 Query: 158 ------EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 E + A + L + D L+ K V D G+ Sbjct: 207 ANFQTPEFTFDRTESRAAADWDFLKRLRDSWDGNLVAKGVT---DIDDALQLKAQGVDAI 263 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNG 270 ++ GG P L+L+ R + G+R+G Sbjct: 264 QVSTHGGRQLDSAP------------------PPILALKRIRDAIGPQYPLFYDTGMRSG 305 Query: 271 VDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 D++K+ +GA A D + L E +++ +G + Sbjct: 306 EDVVKAYHMGADFVFFGRGMQFAIAAGGRDGLEQYWNLLADEASLTLAQMGLTTL 360 >gi|108805300|ref|YP_645237.1| glutamate synthase (NADPH) GltB2 subunit [Rubrobacter xylanophilus DSM 9941] gi|108766543|gb|ABG05425.1| glutamate synthase (NADPH) GltB2 subunit [Rubrobacter xylanophilus DSM 9941] Length = 460 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 102/340 (30%), Gaps = 77/340 (22%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD----EVDPSVEFLGKK-------LSFPLLISSMTG 66 G R FDD + +L + + LG + L P+ + M+ Sbjct: 47 GAKRRVPHFDDLTFLTASLTRYPLEGYREKCSTKT-ILGTRYAKKPIELDIPITFAGMSF 105 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLI 120 G+ + + L AA + G + + + K+ + P + Sbjct: 106 GS--LSANVKEALGRAATAMGTSTTTGDGGMTEEERQSSKTLVYQCLPSRYGFNPDHLRK 163 Query: 121 SNLGAVQLNYDFGVQKAHQAV--HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 ++ V + + + L P + + ++ + Sbjct: 164 ADAIEVVVGQGAKPGGGGMLLGQKISERVAKMRTLPPGIDQRSACRHPDWTGSDDLTIKI 223 Query: 179 -----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGT---SWSRIESHRD 229 + ++P+ +K G D++L +K+G + G +GGT IE Sbjct: 224 EELREITDWEIPIYVK-FGATRVKDDVKLAVKAGADVVVVDGMQGGTAATQDVFIEHA-- 280 Query: 230 LESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 GIPT ++ + Q I SGG+R G D+ K++ LGA Sbjct: 281 ------------GIPTLAAITQAVEALEEMDVKGKVQLIISGGIRTGADVAKALALGADA 328 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 + +MF LG Sbjct: 329 VSIGQG-------------------------AMFALGCNS 343 >gi|295133407|ref|YP_003584083.1| L-lactate dehydrogenase [Zunongwangia profunda SM-A87] gi|294981422|gb|ADF51887.1| L-lactate dehydrogenase [Zunongwangia profunda SM-A87] Length = 383 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 29/169 (17%) Query: 165 NTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + F+ KI + L+LK V S D + +K G ++ GG Sbjct: 231 DRTFSGKLNEEKIKPIRDRWKGKLVLKGVQ---SLQDTKDAIKMGFDGIIVSNHGGRQLD 287 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 +S + +I + D E + + GLR+G DI +++ GA Sbjct: 288 AAQSTINSLKEIAATYGD-----------------EIEVMMDSGLRSGPDIARAMACGAK 330 Query: 283 LGGLASPFLK----PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + F+ D I L+ +F M L +RV++L Sbjct: 331 FTFMGRSFMYGCGALGNKGGD---HTIGMLKTQFKQVMDQLVCERVEDL 376 >gi|150377573|ref|YP_001314168.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium medicae WSM419] gi|150032120|gb|ABR64235.1| L-lactate dehydrogenase (cytochrome) [Sinorhizobium medicae WSM419] Length = 396 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 25/170 (14%) Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 E ++ N+ I + +L+K + LS D +G ++ G Sbjct: 229 EAVRLENLLNW----EDIRQIRQWWKGKILIKGI---LSVTDALKAKAAGAEGIVVSSHG 281 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 + + I + + +A G+ G D+LK + Sbjct: 282 ARNLDVAPPPARVLPQIAD-----------------AVGRDVEVLADSGVMRGSDVLKYV 324 Query: 278 ILGASLGGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 LGA + P A D + LR E +++ +LG ++ + Sbjct: 325 ALGARSVMIGRLPLWGLAAGGEDGADLLLSMLRNEIDLTLCMLGLQKPAD 374 >gi|261403009|ref|YP_003247233.1| Glutamate synthase (NADPH) [Methanocaldococcus vulcanius M7] gi|261370002|gb|ACX72751.1| Glutamate synthase (NADPH) [Methanocaldococcus vulcanius M7] Length = 510 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 103/339 (30%), Gaps = 71/339 (20%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDH 102 KL P++I+ M+ G + + + A A ++ M G Sbjct: 171 NLKLDTPIMIAHMSYGALSLNAHL--SFAKAVKECGTFMGTGEGGLPKPLYPYADHIITQ 228 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQE 158 A F + + + A+++ G + H + A+ + P + Sbjct: 229 VASGRFGVNEEY-----LMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATRMIPEGTD 283 Query: 159 IIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + + L+ S P+ +K + S I Sbjct: 284 AISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVI 343 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGL 267 G G + + + RD GIP +++ NE IASGG+ Sbjct: 344 DGYKGGTGAAPKVFRDH----------VGIPIEMAIAAVDQRLREEGLRNEISVIASGGI 393 Query: 268 RNGVDILKSIILGASLG-------------------------GLA--SPFLKPAMD---S 297 R D+ K+I LGA G+A P L +D Sbjct: 394 RCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVG 453 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I++ E + G ++ L N +R Sbjct: 454 ARRVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|312142602|ref|YP_003994048.1| ferredoxin-dependent glutamate synthase [Halanaerobium sp. 'sapolanicus'] gi|311903253|gb|ADQ13694.1| ferredoxin-dependent glutamate synthase [Halanaerobium sp. 'sapolanicus'] Length = 426 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 107/298 (35%), Gaps = 56/298 (18%) Query: 26 FDDWHLIHRALPEISFDEVDP------SVEFLGKK-------LSFPLLISSMTGGNNKMI 72 FDD ++ L +S +D + LGK+ + P++I+ M+ G Sbjct: 45 FDDIVVLPSQLSRMS---IDTYREKCETRTVLGKRNAKKPLVIETPIMIAGMSYGALSKE 101 Query: 73 ERINRNLAIAAEKTKVAMAVGS-----------QRVMFSDHNAIKSFELRQYAPHTVLIS 121 +I A A+ T ++ G Q + S + A + Sbjct: 102 AKIALAKATASTGTVISNGEGGLLKEELQNSYRQSIQILPSRFGFSKDNLDVADMLEFLV 161 Query: 122 NLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 +GA L + ++ + + G+ LH +P + ++ Sbjct: 162 GIGAKPGLSGHLMGEKITEEIAEYRQL--PVGIDLHSHPRHGDAFGADDMVIK--MEQLR 217 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIG 235 L++ +VP+ +K + G D+++ K G+ I G GGT + + Sbjct: 218 ELTND-EVPIFMK-IAAGRVKDDVKIAAKVGVDGIIIDGAQGGTGAAPV----------- 264 Query: 236 IVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + GIPT +L E I SGG+++G D+ K+I +GA + Sbjct: 265 MASDHLGIPTMPALVQAVKTLEEANLKQEIDIIISGGIKDGADLAKAIAMGADAVAIG 322 >gi|313903725|ref|ZP_07837114.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] gi|313465913|gb|EFR61438.1| ferredoxin-dependent glutamate synthase [Thermaerobacter subterraneus DSM 13965] Length = 524 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 105/289 (36%), Gaps = 59/289 (20%) Query: 43 EVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV 97 +VD V + L P+LI+ M G LA + KVA+A S V Sbjct: 112 DVDTRVTIGPQAARPLHLKIPILITGMAYG-----------LA-LTREAKVALARASAMV 159 Query: 98 MFSDHNAIKSF--ELRQYAPHTVLISNLGAVQLNYDFGVQ-KAHQAVHVLGADGLF---- 150 + ++ F + R++A H ++ N G + + Q A + GAD Sbjct: 160 GTATNSGESGFLADERRHAKHYIVQYNRGGWNIRPEQLRQADAIEIQFGQGADASAQEST 219 Query: 151 ------------LHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-----DVPLLLKEVGC 193 L L P +E + A +A L + VP+ +K Sbjct: 220 PWDMLDEPVRRHLGLRPGEEAVIHTRFPQVASPDD-LARLVEELRRMTGGVPIGVKLCAG 278 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 L + D+ + +G+ + I G G++ D+G+P ++ A Sbjct: 279 DLEA-DLRAAVAAGVDFISIDGAKGSTG----------KGYLFTINDFGLPVVYAIPEAD 327 Query: 254 P------YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 + IASGGLR+G D LK++ LGA + + L + Sbjct: 328 RILRELGVRDRITLIASGGLRDGADFLKAMALGADACYVGTAILLAMVQ 376 >gi|153836427|ref|ZP_01989094.1| glutamate synthase domain protein [Vibrio parahaemolyticus AQ3810] gi|149750329|gb|EDM61074.1| glutamate synthase domain protein [Vibrio parahaemolyticus AQ3810] Length = 469 Score = 76.1 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVEFL-------GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E + KL+ PLL+S M+ G +I LA AE + G Sbjct: 115 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 172 Query: 94 SQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVL 144 + M + A S F A S L VQ + G Q A A + Sbjct: 173 -EGGMLPEEQAANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNV 231 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 232 GKISQVRGIPEGQPAISPPTFTDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 288 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 289 DIQFALDASADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 338 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 339 KGVSDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|149187525|ref|ZP_01865822.1| putative glutamate synthetase [Vibrio shilonii AK1] gi|148838405|gb|EDL55345.1| putative glutamate synthetase [Vibrio shilonii AK1] Length = 515 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 37/257 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ PL +S M+ G ++ +LA AE + G + M + A S + Sbjct: 178 LKLNIPLFVSDMSFGALSEEAKV--SLATGAELAGTGICSG-EGGMLPEEQAANSRYFYE 234 Query: 113 YAPHTVLI--SNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQP- 162 A S L +VQ + G Q A +G + + I P Sbjct: 235 LASAGFGYDESKLKSVQAFHFKGGQGAKTGTGGHLPGNKNIGKISQVRGIPEGEPAISPP 294 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 N +F + ++ ++ +P+ K + DI+ L + Y + GRG Sbjct: 295 TFKDLNTAEDFRRFADRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGRG 351 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + E RD S +PT +L AR Y ++ I +GGLR + Sbjct: 352 GGTGAAPEMFRDHIS----------VPTIPALARARRYLDQQGASGRVTLIITGGLRVPM 401 Query: 272 DILKSIILGASLGGLAS 288 D +K++ LGA +++ Sbjct: 402 DFVKALALGADGVAISN 418 >gi|323492258|ref|ZP_08097416.1| putative glutamate synthetase [Vibrio brasiliensis LMG 20546] gi|323313571|gb|EGA66677.1| putative glutamate synthetase [Vibrio brasiliensis LMG 20546] Length = 511 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 37/257 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G ++ +LA AE + G + M + A S + Sbjct: 178 LKLDIPLFVSDMSFGALSEEAKV--SLAKGAELAGTGICSG-EGGMLPEEQAANSRYFYE 234 Query: 113 YAPHTVLIS--NLGAVQLNYDFGVQKAHQ-------AVHVLGADGLFLHLNPLQEIIQP- 162 A S L VQ + G Q A A +G + Q I P Sbjct: 235 LASAGFGYSEDKLLGVQAFHFKGGQGAKTGTGGHLPASKNIGKISQVRGIPEGQPAISPP 294 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + + +FA + ++ ++ +P+ K + DI+ L +G Y + GRG Sbjct: 295 TFKDLHTSQDFAKFADRVREITG--GIPIGFKLSANHIE-QDIQFALDAGADYIILDGRG 351 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + RD S +PT +L AR Y ++ I +GGLR + Sbjct: 352 GGTGAAPAMFRDHIS----------VPTIPALARARRYLDQQNASGRVTLIITGGLRLPM 401 Query: 272 DILKSIILGASLGGLAS 288 D +K++ LGA +++ Sbjct: 402 DFVKAMALGADGVAISN 418 >gi|319948279|ref|ZP_08022432.1| dehydrogenase [Dietzia cinnamea P4] gi|319438071|gb|EFV93038.1| dehydrogenase [Dietzia cinnamea P4] Length = 420 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 23/139 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P++LK V L D SG+ ++ GG Sbjct: 303 WEHLATLRDRTRLPIVLKGV---LHPDDARQAFDSGVDAVMVSNHGGRQVDGS------- 352 Query: 232 SDIGIVFQDWGIPTPLSLEMAR-PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I T +L R E + G+RNG D++K++ GA+ + P Sbjct: 353 -----------IGTLDALVRIREAVGPEPTVLLDSGVRNGTDVVKAMACGANAVTIGRPH 401 Query: 291 LK-PAMDSSDAVVAAIESL 308 + A+ V +++L Sbjct: 402 IYGLAIAGERGVGEVLDNL 420 Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 12/142 (8%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N++ FD L+ R L S D + LG++L P+L++ + G + Sbjct: 70 AGSGTTMTANREAFDRRPLVPRMLRNTSRR--DLATTVLGQRLPAPVLVAPI-GAAGLVR 126 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + + AA + + + SQ + A + L + + Sbjct: 127 RDADLMVGRAAAQRGIPYILSSQGSSPMEETA-------RAMAGGPRWYQL--YWSSDEQ 177 Query: 133 GVQKAHQAVHVLGADGLFLHLN 154 V + A L + L+ Sbjct: 178 LVDSFIARAEAIDAGALVVTLD 199 >gi|320174094|gb|EFW49262.1| L-lactate dehydrogenase [Shigella dysenteriae CDC 74-1112] Length = 345 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 93/323 (28%), Gaps = 80/323 (24%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + + L R L + ++ +KLS P+ ++ + G Sbjct: 29 AYSEYTLRRNVEDLSEVALRQRILK--NMSDLSLETTLFNEKLSMPVALAPV-GLCGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-----SFELRQYAPHTVLISNLGAVQ 127 R A AA+ + + + V + A F+L + A++ Sbjct: 86 RRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMR---NALE 142 Query: 128 LNYDFGVQKAHQAVHV-------LGADGLFLHLNP-----LQEIIQPN------------ 163 G V + A N LQ + P Sbjct: 143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPH 202 Query: 164 -------------GNTNFADLSSK----------IALLSSAMDVPLLLKEVGCGLSSMDI 200 G ++ + + D P+++K + L D Sbjct: 203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGI---LDPEDA 259 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEA 259 ++ G ++ GG + + + +L +A + Sbjct: 260 RDAVRFGADGIVVSNHGGRQLDGV------------------LSSARALPAIADAVKGDI 301 Query: 260 QFIASGGLRNGVDILKSIILGAS 282 +A G+RNG+D+++ I LG Sbjct: 302 AILADSGIRNGLDVVRMIALGCR 324 >gi|313676429|ref|YP_004054425.1| glutamate synthase (nadph) [Marivirga tractuosa DSM 4126] gi|312943127|gb|ADR22317.1| Glutamate synthase (NADPH) [Marivirga tractuosa DSM 4126] Length = 504 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 99/261 (37%), Gaps = 36/261 (13%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FEL 110 KL PL +S M+ G ++ L+ AE + G + M ++ A S F Sbjct: 172 LKLDIPLFVSDMSFGALSEEAKV--ALSKGAELAGTGICSG-EGGMLNEEQAANSRYFYE 228 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAH-------QAVHVLGADGLFLHLNPLQEIIQP- 162 A L VQ + G Q A A V+G +L + P Sbjct: 229 YASAKFGFEWEKLKRVQAFHFKGGQGAKTGTGGHLSANKVVGKIAEVRNLKEGTAAVSPP 288 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + +F + K+ ++ +P+ K + + DI+ L + Y + GRG Sbjct: 289 TFDDLHSAEDFKAFADKVREVTG--GIPIGFKLSANHIEA-DIQFALDASADYIILDGRG 345 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVD 272 G + + R+ + +PT +L AR Y + + I +GG+R D Sbjct: 346 GGTGAAPLIFRN----------NISVPTIPALARARKYLDKMDRKDVTLIITGGIRIPDD 395 Query: 273 ILKSIILGASLGGLASPFLKP 293 +K++ LGA +++ L+ Sbjct: 396 FIKALALGADGIAVSNSALQS 416 >gi|87120065|ref|ZP_01075961.1| Ferredoxin-dependent glutamate synthase [Marinomonas sp. MED121] gi|86164767|gb|EAQ66036.1| Ferredoxin-dependent glutamate synthase [Marinomonas sp. MED121] Length = 440 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 22/142 (15%) Query: 164 GNTNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ KI + D VP+ +K VG + D++L +K+G + G G Sbjct: 200 RHPDWTGPDDLAIKIQEIREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIPT ++ A E Q I SGG+RNG D Sbjct: 259 GTAATQEVFIEH----------VGIPTLAAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 308 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + K + LGA + + L Sbjct: 309 VAKCMALGADAVAIGTAALVAL 330 >gi|307941827|ref|ZP_07657181.1| ferredoxin-dependent glutamate synthase [Roseibium sp. TrichSKD4] gi|307774924|gb|EFO34131.1| ferredoxin-dependent glutamate synthase [Roseibium sp. TrichSKD4] Length = 536 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 115/295 (38%), Gaps = 42/295 (14%) Query: 26 FDDWHLI----HRALPEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERIN 76 +DD ++ HR +P + + V + KL+ PL++S M+ G ++ Sbjct: 169 WDDIQILTAQLHR-MPLLDDEAVGTEIVIGPNAKKPLKLAIPLMVSDMSYGALSEPAKL- 226 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH-TVLISNLGAVQLNYDFGVQ 135 LA AE + G ++ + A + + L VQ + G Q Sbjct: 227 -ALARGAELAGTGICSGEGGMLPEEQEANSRYFYELASGRFGFEWDKLAKVQAFHFKGGQ 285 Query: 136 KAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-----D 183 A V G LN + I P+ ++AD+ S+I + + Sbjct: 286 GAKTGTGGHLPGNKVKGKIAQVRGLNQGEAAISPSRFPDWADI-SQIREFADEVRSRTGG 344 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+ K + DI+ L+ G+ Y + GRGG + + RD + + Sbjct: 345 IPVGYKLSAQHVEK-DIDAALEVGVDYIILDGRGGGTGAAPIIFRD----------NISV 393 Query: 244 PTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 PT +L AR + + + + +GGLR D +K++ LGA L++ ++ Sbjct: 394 PTIPALARARRHLDSLGRKDVTLVITGGLRKPADFIKALALGADAIALSNSAMQA 448 >gi|209518694|ref|ZP_03267511.1| ferredoxin-dependent glutamate synthase [Burkholderia sp. H160] gi|209500893|gb|EEA00932.1| ferredoxin-dependent glutamate synthase [Burkholderia sp. H160] Length = 453 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG + D++L + +G I G +G Sbjct: 203 RHPDWTGPDDLAIKIQELREITDWEKPIYVK-VGATRTFNDVKLAVHAGADVVVIDGMQG 261 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT+ ++ ++ GIPT ++ A + Q I SGG+R G Sbjct: 262 GTAATQT-----------CFIENVGIPTLAAVRQAVDALEDLNMKGQVQLIVSGGIRTGA 310 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + L Sbjct: 311 DVAKALALGADAVAIGQGVLMAL 333 >gi|83590140|ref|YP_430149.1| glutamate synthase (NADPH) GltB2 subunit [Moorella thermoacetica ATCC 39073] gi|83573054|gb|ABC19606.1| glutamate synthase (NADPH) GltB2 subunit [Moorella thermoacetica ATCC 39073] Length = 502 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 98/336 (29%), Gaps = 69/336 (20%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQR-----VMFSDHNAIKS- 107 L P++ S+M+ G+ + +LA AA++ G ++DH ++ Sbjct: 163 PLETPIMFSAMSYGS--ISHEAFESLARAAKEFGTMFNTGEGGLPEDLYQYADHAVVQVA 220 Query: 108 ---FELRQYAPHTVLISNLGAVQLN--------YDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + + I + Q + A A ++ L P Sbjct: 221 SGRFGVHADYLNAGRIIEIKIGQGAKPGIGGHLPGEKITAAVSATRMIPEGTDALSPAPH 280 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 +I + P+ +K + ++G + G Sbjct: 281 HDIYSIEDLKQLVFTLKEATRYQK----PVSVKVSAVHNVAAIASGIARAGADIITVDGF 336 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + + RD GIP L++ N+ +A+GG R+ Sbjct: 337 RGGTGAAPTMIRDH----------VGIPIELAIAAVDQRLREEGIRNKVSLVAAGGFRSS 386 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D++K+I LGA +A+ L ++ Sbjct: 387 ADVVKAIALGADAVYIATAALIALGCHLCQKCYTGKCSWGIATQDPYKTRRLNPEIGAER 446 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + E + +G ++ L N +R Sbjct: 447 LYNLLRGWSHEIKEMLGGMGINSIESLRGNRLHLRG 482 >gi|308094481|ref|ZP_07662942.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AN-5034] gi|308095451|ref|ZP_07663286.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus Peru-466] gi|308125900|ref|ZP_07663561.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus K5030] gi|308087107|gb|EFO36802.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus Peru-466] gi|308090603|gb|EFO40298.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AN-5034] gi|308114335|gb|EFO51875.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus K5030] Length = 469 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVEFL-------GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E + KL+ PLL+S M+ G +I LA AE + G Sbjct: 115 LEDVPVSTELIVGPNARKPLKLAIPLLVSDMSFGALSEEAKI--ALAKGAELAGTGICSG 172 Query: 94 SQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVL 144 + M + A S F A S L VQ + G Q A A + Sbjct: 173 -EGGMLPEEQAANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNV 231 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 232 GKISQVRGIPEGQPAISPPTFTDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 288 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 289 DIQFALDASADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 338 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 339 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|242766336|ref|XP_002341150.1| L-lactate dehydrogenase [Talaromyces stipitatus ATCC 10500] gi|218724346|gb|EED23763.1| L-lactate dehydrogenase [Talaromyces stipitatus ATCC 10500] Length = 416 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 26/168 (15%) Query: 169 ADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 A K+ L + P LK + S D + ++ G+ ++ G Sbjct: 256 AWSWEKLPWLIQQWKLISGGRPFALKGIQ---SVADAKKAVEYGVDGIVVSNHAGRQVDG 312 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D +I ++ + G+R D++K++ LGA Sbjct: 313 AIASLDALENI-----------------VDAVGDKTYVMFDSGVRGASDVVKALALGAKF 355 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + ++ + V ++SL +F + M + G V+E + Sbjct: 356 VFVGRLWVWGLSIMGEEGVRHVMKSLLADFDIFMAVGGFTNVKEFDRS 403 >gi|77166405|ref|YP_344930.1| ferredoxin-dependent glutamate synthase [Nitrosococcus oceani ATCC 19707] gi|76884719|gb|ABA59400.1| Ferredoxin-dependent glutamate synthase [Nitrosococcus oceani ATCC 19707] Length = 510 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 42/296 (14%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERIN 76 ++D ++ L + E VD + L+ PL +S M+ G + Sbjct: 140 GWEDIQILTAQLARMPLQEDAPVDTGLTIGPNAKRPLHLALPLFVSDMSFGALSEEAK-- 197 Query: 77 RNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFELR--QYAPHTVLISNLGAVQLNYDF 132 LA AE T +A G N+ FEL ++ L++ + A Sbjct: 198 TALARGAELAGTGIASGEGGMLPAEQQANSRYMFELASAKFGYSESLLTRIQAFHFKAGQ 257 Query: 133 GVQK--------AHQAVHVLGADGLFLHLNPLQEIIQPNGN--TNFADLSSKIALLSSAM 182 + + + G+ + + + I PN +F + + + +S Sbjct: 258 AAKTGTGGHLPGVKVSEDIASVRGIPVGKDAVSPSIFPNLKAPHDFKEFADHVREVSG-- 315 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+ K + DI+ L++ Y + GRGG + + RD + Sbjct: 316 GIPIGFKMSAQHIEK-DIDFALEASADYIILDGRGGGTGAAPLLFRD----------NIA 364 Query: 243 IPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +PT +L AR + + + I +GGLR D +K++ LGA +A+ ++ Sbjct: 365 VPTIPALARARRHLHAVGREDVTLIITGGLRTPDDFIKALCLGADGIAVANSAIQA 420 >gi|118588196|ref|ZP_01545605.1| ferredoxin-dependent glutamate synthase [Stappia aggregata IAM 12614] gi|118438902|gb|EAV45534.1| ferredoxin-dependent glutamate synthase [Stappia aggregata IAM 12614] Length = 536 Score = 76.1 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 95/262 (36%), Gaps = 38/262 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PLL+S M+ G +I LA A+ + G + M + S + Sbjct: 204 LKLKIPLLVSDMSFGALSEPAKI--ALARGADLAGTGICSG-EGGMLPEEQQANSRYFYE 260 Query: 113 YAPH--TVLISNLGAVQLNYDFGVQKAHQA-------VHVLGADGLFLHLNPLQEIIQPN 163 A L VQ + G Q A V G L ++ I P Sbjct: 261 LASARFGFAWDKLDKVQAFHFKGGQGAKTGTGGHLPGAKVKGKIAEVRGLKEGEDAISP- 319 Query: 164 GNTNFADLSSK--IALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 F D + + I + + +P+ K + DI+ L+ G+ Y + GR Sbjct: 320 --PRFPDWTERSQIKDFADEVRTRTGGIPIGYKLSAQHIEK-DIDAALEVGVDYIILDGR 376 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-----PYCNEAQFIASGGLRNGV 271 GG + + RD + +PT +L AR + I +GGLR Sbjct: 377 GGGTGAAPIIFRD----------NISVPTIPALARARRHLDASRRPDVTLIITGGLRKPA 426 Query: 272 DILKSIILGASLGGLASPFLKP 293 D +K++ LGA L++ ++ Sbjct: 427 DFIKALALGADAVALSNSAMQA 448 >gi|260587118|ref|ZP_05853031.1| glutamate synthase [Blautia hansenii DSM 20583] gi|331082898|ref|ZP_08332019.1| hypothetical protein HMPREF0992_00943 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542608|gb|EEX23177.1| glutamate synthase [Blautia hansenii DSM 20583] gi|330400039|gb|EGG79692.1| hypothetical protein HMPREF0992_00943 [Lachnospiraceae bacterium 6_1_63FAA] Length = 501 Score = 76.1 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 104/334 (31%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P++ S+M+ G+ ++LA+AA + + G + + K+ Sbjct: 163 LELSMPVMFSAMSYGSISYNAH--KSLALAATELGILYNTGEGGLHEDFYCYGKNTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + + + Q G+ ++G + + I P Sbjct: 221 ASGRFGVYEDYLKAGSAIEIKMGQ-GAKPGIGGHLPGTKIIGDVSRTRMIPEGSDAISPA 279 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ ++ P+++K + +SG I G G Sbjct: 280 PHHDIYSIEDLRQLVFSVKEATQYQKPVIVKVAAVHNIAAIASGIARSGADIIAIDGFRG 339 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N I G +R+ D Sbjct: 340 GTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRNNVSLIVGGSIRSAAD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K+I LGA +A+ L +V Sbjct: 390 VVKAIALGADACYIATAALLALGCHLCRTCQSGKCNWGIATQRPELVKRLDPEIGKQRLV 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I + E M +G ++ L N ++R Sbjct: 450 NLITAWNHEIKELMGGMGINSIEALRGNRLMLRG 483 >gi|70608028|ref|YP_256898.1| hypothetical protein Saci_2320 [Sulfolobus acidocaldarius DSM 639] gi|68568676|gb|AAY81605.1| hypothetical protein Saci_2320 [Sulfolobus acidocaldarius DSM 639] Length = 712 Score = 76.1 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 96/315 (30%), Gaps = 41/315 (13%) Query: 2 VNDRKIDHIN-IVCKDPGID-----RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKL 55 DR IDHI + + D H S G + Sbjct: 20 TADR-IDHIRRLALTGKPYKIFPHYDTLRVLDRIHFKKENTLISDSPSSAISTSVAGIPV 78 Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG----------SQRVMFSDHNAI 105 S PL + M+ G + N +A A+ T+ G S+R+ +A Sbjct: 79 SAPLYLGDMSYGA--LSGNPNIAIARVADITETLAGTGEGGLHPEVGKSKRIFVQWASAR 136 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 ++ ++ +G G+ V L + + I P + Sbjct: 137 FGVDIDVLMKGAGIVIKIGQGAKP---GIGGHLPGSKVTDPISLTRRIPVGIDAISPAPH 193 Query: 166 TNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + +I L A P+ +K + + G I G G + + Sbjct: 194 HDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGA 253 Query: 223 RIESHRDLESDIGIVFQDWGIP----TPLS--LEMARPYCNEAQFIASGGLRNGVDILKS 276 RD + GIP +S + A+ + IA+G + N D K Sbjct: 254 TPTVIRD----------NLGIPIELAVAISDKVLKAQGMRDNFTVIAAGRIANATDAAKL 303 Query: 277 IILGASLGGLASPFL 291 I LGA + + + L Sbjct: 304 IALGADVVSVGTGAL 318 >gi|254436242|ref|ZP_05049749.1| Conserved region in glutamate synthase superfamily [Nitrosococcus oceani AFC27] gi|207089353|gb|EDZ66625.1| Conserved region in glutamate synthase superfamily [Nitrosococcus oceani AFC27] Length = 513 Score = 76.1 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 42/296 (14%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERIN 76 ++D ++ L + E VD + L+ PL +S M+ G + Sbjct: 143 GWEDIQILTAQLARMPLQEDAPVDTGLTIGPNAKRPLHLALPLFVSDMSFGALSEEAK-- 200 Query: 77 RNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFELR--QYAPHTVLISNLGAVQLNYDF 132 LA AE T +A G N+ FEL ++ L++ + A Sbjct: 201 TALARGAELAGTGIASGEGGMLPAEQQANSRYMFELASAKFGYSESLLTRIQAFHFKAGQ 260 Query: 133 GVQK--------AHQAVHVLGADGLFLHLNPLQEIIQPNGN--TNFADLSSKIALLSSAM 182 + + + G+ + + + I PN +F + + + +S Sbjct: 261 AAKTGTGGHLPGVKVSEDIASVRGIPVGKDAVSPSIFPNLKAPHDFKEFADHVREVSG-- 318 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+ K + DI+ L++ Y + GRGG + + RD + Sbjct: 319 GIPIGFKMSAQHIEK-DIDFALEASADYIILDGRGGGTGAAPLLFRD----------NIA 367 Query: 243 IPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +PT +L AR + + + I +GGLR D +K++ LGA +A+ ++ Sbjct: 368 VPTIPALARARRHLHAVGREDVTLIITGGLRTPDDFIKALCLGADGIAVANSAIQA 423 >gi|120406455|ref|YP_956284.1| ferredoxin-dependent glutamate synthase [Mycobacterium vanbaalenii PYR-1] gi|119959273|gb|ABM16278.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium vanbaalenii PYR-1] Length = 447 Score = 75.7 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 37/191 (19%) Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G L + A + G D L + +N L+EI + + Sbjct: 189 GMRTLPEGIDQRSACRHPDWTGPDDLTIKINELREI--------------------TDWE 228 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K VG + D++L + +G + G G + + E + GI Sbjct: 229 KPIYVK-VGASRTYYDVKLAVHAGADVVVVDGMQGGTAATQEVFIEH----------VGI 277 Query: 244 PTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 PT ++ A E Q I SGG+RNG D+ K++ LGA + + L D+ Sbjct: 278 PTLAAIPQAVQALQELGVHRKVQLIVSGGIRNGADVAKALALGADAVAIGTAALIALGDN 337 Query: 298 SDAVVAAIESL 308 A E L Sbjct: 338 HPRYAAEYEKL 348 >gi|89896790|ref|YP_520277.1| hypothetical protein DSY4044 [Desulfitobacterium hafniense Y51] gi|219667379|ref|YP_002457814.1| ferredoxin-dependent glutamate synthase [Desulfitobacterium hafniense DCB-2] gi|89336238|dbj|BAE85833.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537639|gb|ACL19378.1| ferredoxin-dependent glutamate synthase [Desulfitobacterium hafniense DCB-2] Length = 453 Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 120/357 (33%), Gaps = 76/357 (21%) Query: 36 LPEISFDEVDPSVEFLGK-----KLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVA 89 LP +D V + KL P+LI+ M+ GG+ + +I LA A A Sbjct: 84 LPTPDDTTIDTKVVIGPQAQKPLKLDTPILITGMSYGGSLNLPMKI--ALAKGASTAGTA 141 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYA-------PHTVLISNLGAVQLNYDFGVQKAHQAVH 142 G + + + F + QY P + + + VQL +V Sbjct: 142 TNTG-ESAVSEEEREAADFLIGQYNRGGWLNSPEQLGLVDAIEVQLGQGAWGGAVSSSVK 200 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSS---------KIALLSSAMDVPLLLKEVGC 193 D HL L +I + + L I L VP+ +K Sbjct: 201 EEDMD---EHLRVLWQIDEGGSTGKSSRLPEVNSPEDLVKLIKKLKKEYSVPVGIKIAAT 257 Query: 194 GLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL--- 249 ++E+ K+ + I G+ GGT+ S D G+PT L Sbjct: 258 HFMERELEVIAKTEADFICIDGQEGGTAASSPTLE-----------DDMGLPTLFGLGRT 306 Query: 250 ---EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM----------- 295 + + IA+GG R +ILK++ LGA + S + A+ Sbjct: 307 INWLKGQNLREQFTVIAAGGFRTPGEILKALALGADAVYIGSIAIIAALQNQITKALPQH 366 Query: 296 -------------------DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + S + + S ++E +++ +G K +QEL + Sbjct: 367 PAHQLALYNGSLAEEFDIEEGSRCLANFLLSCQEELKMALQAMGKKAIQELGREDLV 423 >gi|160932076|ref|ZP_02079467.1| hypothetical protein CLOLEP_00910 [Clostridium leptum DSM 753] gi|156868678|gb|EDO62050.1| hypothetical protein CLOLEP_00910 [Clostridium leptum DSM 753] Length = 501 Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 111/343 (32%), Gaps = 81/343 (23%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL P+L S+M+ G+ +LA AA + + G + + F + Sbjct: 163 LKLEVPVLFSAMSYGSLSYNAH--ESLARAAAQLGILYNTG-------EGGLHEDFY--R 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD--GLFLHLNPLQ------------- 157 Y +T++ G ++ D+ A + + G+ HL P Q Sbjct: 212 YGKNTIVQVASGRFGVHKDYLSAGAAIEIKMGQGAKPGIGGHL-PGQKIVGDVSKTRMVT 270 Query: 158 ---EIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIR 209 + I P + + DL + L A + P+++K + +SG Sbjct: 271 EGTDAISPAPHHDIYSIEDLRQLVYSLKEATNYEKPVIVKIAAVHNVAAIASGIARSGAD 330 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIA 263 I G G + + RD + GIP L+L IA Sbjct: 331 IIAIDGFRGGTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRGSVSIIA 380 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------- 294 G +R+ D++K++ LGA +A+ L Sbjct: 381 GGSIRSSADVVKAVALGADAVYIATSALLALGCHLCRTCQTGKCNWGIATQRPDLVKRLN 440 Query: 295 -MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + + + E M +G ++ L N ++R Sbjct: 441 PDIGCQRLVNLVTAWQHEIKEMMGGMGINSIEALKGNRLMLRG 483 >gi|149915395|ref|ZP_01903922.1| glutamate synthase large subunit-like protein [Roseobacter sp. AzwK-3b] gi|149810684|gb|EDM70525.1| glutamate synthase large subunit-like protein [Roseobacter sp. AzwK-3b] Length = 454 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 34/253 (13%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELRQ 112 L P+ I+ M+ G + LA A A G +++ ++ Q Sbjct: 94 LDIPVYITGMSFGALSYEAK--TALARGATMAGTATCSGEGGMIPDERRYSSKWFYQCIQ 151 Query: 113 ----YAPHTVLISNLGAVQLNYD--FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 + PH +++++ + G+ V L + P + Sbjct: 152 SRYGFNPHHLVLADGCEFFIGQGCKVGLGGHLMGQKVTDQVAEMRSLPAGIDQRSPARHP 211 Query: 167 NFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTS 220 ++ KI + A D +P+ LK +G D+ + +K I G GGT Sbjct: 212 DWLGPDDLALKIQEIREATDWQIPIQLK-LGAARVYDDVRMAVKCDPDSIYIDGMEGGT- 269 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDIL 274 + +D G+P ++ AR ++ + +GG+RNG D+ Sbjct: 270 --------GAGPHLAT--EDTGVPGMAAIRQARKAIDDLGKRGEISLVYAGGIRNGADVA 319 Query: 275 KSIILGASLGGLA 287 K+I LGA + Sbjct: 320 KAIALGADAIAIG 332 >gi|158315310|ref|YP_001507818.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EAN1pec] gi|158110715|gb|ABW12912.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EAN1pec] Length = 263 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I L +P+++K V L + D +++G R ++ GG Sbjct: 110 DDITWLQGISRLPVVVKGV---LRADDALSAVRAGARAVIVSNHGGRQLDVA-------- 158 Query: 233 DIGIVFQDWGIPTPLSL--EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +PT +L A+ GG+R+GV +L ++ LGA L P Sbjct: 159 ----------VPTATALPGIARALVGTGAETYVDGGIRSGVHVLAALALGARAVLLGRPV 208 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A +D V + ++ E +M L+G + E+ Sbjct: 209 LWALATAGADNVHRLLRTVTAELQHAMTLVGARNPDEI 246 >gi|289208692|ref|YP_003460758.1| glutamate synthase (NADPH) [Thioalkalivibrio sp. K90mix] gi|288944323|gb|ADC72022.1| Glutamate synthase (NADPH) [Thioalkalivibrio sp. K90mix] Length = 518 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 91/263 (34%), Gaps = 37/263 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L P+L+S M+ G +I LA AE + G + M A S L + Sbjct: 182 LRLDIPMLVSDMSFGALSREAKI--ALARGAEAAGTGICSG-EGGMLDAEQAENSRYLFE 238 Query: 113 YAPHTV-----LISNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQP- 162 P ++ + A GV V ++ Q+ I P Sbjct: 239 LGPARFGYSDEVLEKVQAFHFKAGQAAKTGVGGVLPGAKVSDEIARVRGIDAGQDAISPA 298 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 ++ + ++ +P+ K + + D+ L++G Y + GRG Sbjct: 299 SLDGFETPADYRRFADEVRE--KTGGIPIGFKLSANHIEA-DLAFALEAGADYVILDGRG 355 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGV 271 G + + RD S +PT +L A + +GGLR Sbjct: 356 GGTGASPALLRDHIS----------VPTIPALGRARRFLDANGASGRVTLLVTGGLRTPT 405 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D +K++ LGA LA+ ++ Sbjct: 406 DFVKALALGADGIALANAAIQAV 428 >gi|220932466|ref|YP_002509374.1| Glutamate synthase (NADPH) [Halothermothrix orenii H 168] gi|219993776|gb|ACL70379.1| Glutamate synthase (NADPH) [Halothermothrix orenii H 168] Length = 500 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 100/339 (29%), Gaps = 73/339 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +L P++ S+M+ G+ + ++LA AA + + G + + + Sbjct: 162 LELETPIMFSAMSFGSISLNAC--KSLARAASELGIMYNTGEGGLHRELYQYGNNTIVQV 219 Query: 108 ----FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 F + + + Q + +K V + P + Sbjct: 220 ASGRFGVHKEYLEAGAAIEIKIGQGAKPGIGGHLPGEKVGDEVSRTRM------IPPGTD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + P + + DL I L A D P+ +K + +G I Sbjct: 274 ALSPAPHHDIYSIEDLRQLIYALKEATDYKKPVSVKISAVHNVAAIASGLATAGADIIAI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGL 267 G G + + RD + GIP L+L N + G + Sbjct: 334 DGFRGGTGAAPTMIRD----------NVGIPVELALAAVDTRLRQEGLRNRVSLVVGGSI 383 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA------------------------------MDS 297 RN D++K+I LGA + S L Sbjct: 384 RNSADVVKAIALGADAVYIGSAALIALGCHMCQKCYTGKCNWGIATQRLDLVNRLNPEKG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V I + E + +G ++ L N ++R Sbjct: 444 VERVKNLIRAWSHEIKEMLGGMGINAIESLRGNRLMLRG 482 >gi|88798485|ref|ZP_01114070.1| putative glutamate synthetase [Reinekea sp. MED297] gi|88778925|gb|EAR10115.1| putative glutamate synthetase [Reinekea sp. MED297] Length = 517 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 102/281 (36%), Gaps = 44/281 (15%) Query: 41 FDEVDPSVE-FLG------KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 D+VD + E +G KLS PLL+S M+ G + +A A++ + G Sbjct: 160 LDDVDVASELIIGPNARKPLKLSMPLLVSDMSFGALSEEAK--TAMARGADQAGTGICSG 217 Query: 94 SQRVMFSDHNAIKSFELRQYAPHTV-----LISNLGAVQLNYDFGVQKA----HQAVHVL 144 + M + A +YA + + A G + A V Sbjct: 218 -EGGMLPEEQAENRRYFYEYASAGFGYSDDKLDKVQAFHFKGGQGAKTGTGGHLPANKVT 276 Query: 145 GADGLFLHLNPLQEIIQPNGNTN------FADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 L ++ I P + F + ++ +P+ K + Sbjct: 277 DKIAEVRGLKAGEDAISPATFKDLHTPQDFHAFADRVRE--RTGGIPIGFKLSANHIEK- 333 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + E RD S +PT +L AR Y ++ Sbjct: 334 DIQFALDASADYLILDGRGGGTGAAPELFRDHIS----------VPTIPALARARRYLDQ 383 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +GGLR D +K++ LGA +A+ ++ Sbjct: 384 QGASGRVTLIITGGLRTPADFVKALALGADGIAVANSAMQA 424 >gi|327352939|gb|EGE81796.1| hypothetical protein BDDG_04739 [Ajellomyces dermatitidis ATCC 18188] Length = 312 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 93/284 (32%), Gaps = 61/284 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-----GG 67 ++ + RN+ FD L R VD S GKK P+ IS GG Sbjct: 49 ADEENALRRNRSAFDRLLLRPRVF--RDVSHVDTSTIIFGKKYRIPIGISPSAMQQLVGG 106 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAV 126 N ++ ++A AA M + S D + + VL +L Sbjct: 107 NGEI------DMARAAASRGTTMILSSHTTCTLEDVIQAPGNRINERKTPLVLPPHLSLA 160 Query: 127 QLNYDFGVQKAHQAVHVLGADG----LFLHLNPLQEIIQ-PNGNTNFAD-----LSSKIA 176 L+ V L A + L QE + GN + + S ++ Sbjct: 161 NLHQKRNNSTTK--VKPLKAQPTMNRILLEARTAQEAAEITRGNHDTLNDASLTWSDTMS 218 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L S ++ ++LK + +++ D L ++ G + Sbjct: 219 WLRSKTNLKIILKGI---MTAEDALLAIEHGANAIIMEAA-------------------- 255 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 +W + PLS + I G+ G D+ K++ LG Sbjct: 256 ---NWTLSLPLS---------KVPVIIDSGITRGSDVFKALALG 287 >gi|86147017|ref|ZP_01065335.1| glutamate synthase domain protein [Vibrio sp. MED222] gi|85835267|gb|EAQ53407.1| glutamate synthase domain protein [Vibrio sp. MED222] Length = 520 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 39/258 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ L +S M+ G+ +I +LA AE + G + M + A S + Sbjct: 181 LKLNISLFVSDMSFGSLSEEAKI--SLATGAELAGTGICSG-EGGMLPEEQAANSRYFYE 237 Query: 113 YAP-----HTVLISNLGAVQLNYDFGVQ-----------KAHQAVHVLGADGLFLHLNPL 156 A + N+ A G + + V G + ++P Sbjct: 238 LASAQFGYDESKLKNVQAFHFKGGQGAKTGTGGHLPGAKNIGKIAEVRGIEAGTAAISPP 297 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + +F + ++ ++ +P+ K + DI+ L + Y + GR Sbjct: 298 T-FVDLKTVEDFKKFADRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGR 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNG 270 GG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 354 GGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKQGVSGRVTLIITGGLRVP 403 Query: 271 VDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 404 MDFVKAMALGADGVAISN 421 >gi|312131028|ref|YP_003998368.1| l-lactate dehydrogenase (cytochrome) [Leadbetterella byssophila DSM 17132] gi|311907574|gb|ADQ18015.1| L-lactate dehydrogenase (cytochrome) [Leadbetterella byssophila DSM 17132] Length = 380 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 23/157 (14%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 ++ + L++K V S+ D+E +K GI ++ GG Sbjct: 238 ERLQTIRDRWKGNLVMKGVA---STEDVEKAIKYGIDGVIVSNHGGRQLDA--------- 285 Query: 233 DIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G SLE + + + + + G+R G DI +++ GA L F+ Sbjct: 286 ---------GQSAIKSLEPIVEEFKGKIKIMMDSGVRTGPDIARTLASGAEFAFLGRTFM 336 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A ++ AI L+ + + + + + L Sbjct: 337 YSVAALGAEGGDHAITILKMQLQQVLDQVCCAKPEAL 373 Score = 45.6 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 90/319 (28%), Gaps = 57/319 (17%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 +D + +N + LI L E E E G P IS + + + Sbjct: 32 CNEDVNLFKNTADIREIELIPYYLREYKVPE--MKTELFGHTYDAPFGISPV---GLQGL 86 Query: 73 ERIN--RNLAIAAEKTKVAMAVGSQR-VMFSD----HNAIKSFELRQYAPHTVLISNLGA 125 N + LA AA + + + + D + F+L A Sbjct: 87 MWPNSPQILAKAAVEHNIPFILSTVSTASIEDIGQITDGKFWFQLYHPAKD--------- 137 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-----FADLSSKIALLSS 180 +L D ++ + G L + + +P N I + + Sbjct: 138 -ELRDDMFLR-----LEDAGCKTLVVLSDVPSFGYRPRDIRNGLAMPPQMTLKNILEICT 191 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ + + K + D + L + F Sbjct: 192 H---PVWALSTLYYGTPNFATM-KKYMPKGLD--------------MKQLGQYMNKTFS- 232 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA---SPFLKPAMDS 297 G TP L+ R + G+ + D+ K+I G ++ L + Sbjct: 233 -GRITPERLQTIRDRWKGNLVMK--GVASTEDVEKAIKYGIDGVIVSNHGGRQLDAGQSA 289 Query: 298 SDAVVAAIESLRKEFIVSM 316 ++ +E + + + M Sbjct: 290 IKSLEPIVEEFKGKIKIMM 308 >gi|153832072|ref|ZP_01984739.1| glutamate synthase domain protein [Vibrio harveyi HY01] gi|148871687|gb|EDL70528.1| glutamate synthase domain protein [Vibrio harveyi HY01] Length = 466 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 92/255 (36%), Gaps = 37/255 (14%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L PL +S M+ G +I +LA AE + G + M + A S + A Sbjct: 133 LKIPLFVSDMSFGALSEEAKI--SLAKGAELAGTGICSG-EGGMLPEEQAANSRYFYELA 189 Query: 115 P-----HTVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQP--- 162 + N+ A G + A +G + Q I P Sbjct: 190 SAQFGYDESKLLNVQAFHFKGGQGAKTGTGGHLPANKNVGKISQVRGIPEGQSAISPPTF 249 Query: 163 ---NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + +F + ++ ++ +P+ K + DI+ L + Y + GRGG Sbjct: 250 KDLHTAEDFKKFADRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGRGGG 306 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDI 273 + + RD S +PT +L A+ + I +GGLR +D Sbjct: 307 TGAAPAMFRDHIS----------VPTIPALARARRYLDAQGMSDRVTLIVTGGLRVPMDF 356 Query: 274 LKSIILGASLGGLAS 288 +K++ LGA +++ Sbjct: 357 VKAMALGADGVAISN 371 >gi|15639283|ref|NP_218732.1| hypothetical protein TP0291 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025525|ref|YP_001933297.1| hypothetical protein TPASS_0291 [Treponema pallidum subsp. pallidum SS14] gi|3322569|gb|AAC65283.1| predicted coding region TP0291 [Treponema pallidum subsp. pallidum str. Nichols] gi|189018100|gb|ACD70718.1| hypothetical protein TPASS_0291 [Treponema pallidum subsp. pallidum SS14] gi|291059691|gb|ADD72426.1| FMN-dependent dehydrogenase superfamily [Treponema pallidum subsp. pallidum str. Chicago] Length = 293 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 77/248 (31%), Gaps = 31/248 (12%) Query: 62 SSMTGGNNKMIER----INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 + MTG + L A T V ++VG + I LR + Sbjct: 61 APMTGAVENVGYPDEVSFYYRLIEAVSGTGVLLSVGDGCPDIKLQSGIA--ALRSFKKKA 118 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + V ++ +G D H+ +++ +Q + + Sbjct: 119 AVFIK-PYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKVQLE-----KKTPTHLRA 172 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + +P+++K + + D+EL + ++ GG +E+ R +D Sbjct: 173 VRRFAKLPIVVKGI---FAPRDVELVRELKPDVAIVSNHGGR----VETARGSTADFLFE 225 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 + + GG+R+ + + LGA + PF+ + Sbjct: 226 YGG------------ELARCAGEVWVDGGIRSYAHLCAARELGAQQVLIGRPFITALLKG 273 Query: 298 SDAVVAAI 305 V + Sbjct: 274 GKGGVQLL 281 >gi|148978052|ref|ZP_01814599.1| glutamate synthase domain protein [Vibrionales bacterium SWAT-3] gi|145962736|gb|EDK28010.1| glutamate synthase domain protein [Vibrionales bacterium SWAT-3] Length = 408 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 43/260 (16%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ PL +S M+ G+ ++ +LA AE + G + M + A S + Sbjct: 69 LKLNIPLFVSDMSFGSLSEEAKV--SLATGAELAGTGICSG-EGGMLPEEQAANSRYFYE 125 Query: 113 YAP-----HTVLISNLGAVQLNYDFG-----------VQKAHQAVHV--LGADGLFLHLN 154 A + N+ A G V+ + V + A + Sbjct: 126 LASAQFGYDEAKLKNVQAFHFKGGQGAKTGTGGHLPGVKNIGKIAEVRGIEAGTAAISPP 185 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +++ FAD ++ +P+ K + DI+ L + Y + Sbjct: 186 TFKDLKTSADFKKFADCVREVTG-----GIPIGFKLSANHIE-EDIQFALDASADYIILD 239 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLR 268 GRGG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 240 GRGGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKQGVSDRVTLIITGGLR 289 Query: 269 NGVDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 290 VPMDFVKAMALGADGVAISN 309 >gi|157376684|ref|YP_001475284.1| ferredoxin-dependent glutamate synthase [Shewanella sediminis HAW-EB3] gi|157319058|gb|ABV38156.1| ferredoxin-dependent glutamate synthase [Shewanella sediminis HAW-EB3] Length = 516 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 94/261 (36%), Gaps = 45/261 (17%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G + LAI AE + G + M + A S + Sbjct: 180 LKLKIPLFVSDMSFGALSEEAK--TALAIGAELAGTGICSG-EGGMLPEEQAANSRYFYE 236 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT- 166 A L+ ++ A G + G+ H Q P G Sbjct: 237 LASAQFGYREELLHSIQAFHFKGGQGAKTG----TGGHLPGIKNHGKISQVRGIPEGEPA 292 Query: 167 -------------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 +F + ++ +S VP+ K + DI+ L + Y + Sbjct: 293 ISPPTFRELKSSCDFKRFADRVREVSG--GVPVGFKLSANHIER-DIQFALDATADYIIL 349 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGL 267 GRGG + + E RD S +PT +L AR Y +E I +GGL Sbjct: 350 DGRGGGTGAAPEMFRDHIS----------VPTIPALARARRYLDEQGATGRVTLIVTGGL 399 Query: 268 RNGVDILKSIILGASLGGLAS 288 R +D +K++ LGA +++ Sbjct: 400 RVPMDFVKAMALGADGVAISN 420 >gi|261201578|ref|XP_002628003.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ajellomyces dermatitidis SLH14081] gi|239590100|gb|EEQ72681.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ajellomyces dermatitidis SLH14081] Length = 312 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 93/284 (32%), Gaps = 61/284 (21%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-----GG 67 ++ + RN+ FD L R VD S GKK P+ IS GG Sbjct: 49 ADEENALRRNRSAFDRLLLRPRVF--RDVSHVDTSTIIFGKKYRIPIGISPSAMQQLVGG 106 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKSFELRQYAPHTVLISNLGAV 126 N ++ ++A AA M + S D + + VL +L Sbjct: 107 NGEI------DMARAAASRGTTMILSSHTTCTLEDVIQAPGNRINERKTPLVLPPHLSLA 160 Query: 127 QLNYDFGVQKAHQAVHVLGADG----LFLHLNPLQEIIQ-PNGNTNFAD-----LSSKIA 176 L+ V L A + L QE + GN + + S ++ Sbjct: 161 NLHQKRNNSTTK--VKPLKAQPTMNRILLEARTAQEAAEITRGNHDTLNDASLTWSDTMS 218 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L S ++ ++LK + +++ D L ++ G + Sbjct: 219 WLRSKTNLKIILKGI---MTAEDALLAIEHGANAIIMEAA-------------------- 255 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 +W + PLS + I G+ G D+ K++ LG Sbjct: 256 ---NWTLSLPLS---------KVPVIIDSGITRGSDVFKALALG 287 >gi|254487013|ref|ZP_05100218.1| L(+)-mandelate dehydrogenase [Roseobacter sp. GAI101] gi|214043882|gb|EEB84520.1| L(+)-mandelate dehydrogenase [Roseobacter sp. GAI101] Length = 383 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 91/319 (28%), Gaps = 71/319 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN + F++ L R + + ++D G+ + P ++ + G +N Sbjct: 36 AESERNLRRNIEAFEEVELTPRYM--VDVSDIDTRATLFGQTYNLPFGMAPI-GMHNAFW 92 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM----FSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + LA + + S ++ A + + + L A Sbjct: 93 PDADLILARLCARENIPYTASSASSTTLERLAEAAAGNGWFQLYVSSDPSVTEGLIARAE 152 Query: 129 NYDFGVQKAHQAVHVLGA------DGLFLHLNPLQEIIQP-------------NGNTNFA 169 ++ V V G + L + E++ +G N A Sbjct: 153 AAEYKVMMVTADVPAAGKRDRDIRNQLAVPFKITPEVVAGLIANPIWSLGTLRHGRPNIA 212 Query: 170 DL-----------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + L LL+K + L D + Sbjct: 213 NYADLLQSATSYADVQKTLITPGFTWDDLKRLRDRWKGTLLVKGI---LHPSDAAKCAEL 269 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASG 265 G ++ GG + G PT +L +A + I Sbjct: 270 GCDGIIVSNHGGRQVAF------------------GPPTIEALPPIADVLGGRMKIILDS 311 Query: 266 GLRNGVDILKSIILGASLG 284 G+R G DIL++ GA Sbjct: 312 GIRRGADILRAKAHGADFA 330 >gi|297624560|ref|YP_003705994.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Truepera radiovictrix DSM 17093] gi|297165740|gb|ADI15451.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Truepera radiovictrix DSM 17093] Length = 274 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 100/311 (32%), Gaps = 70/311 (22%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLL--ISSMTGGNNKMIERINR 77 D + + + + L+ R L + + D SV+ LG+ L+ P+L + + ++ Sbjct: 18 DHDLRALESYQLLPRLLH--AVENPDTSVQLLGRTLTAPILPLFEAPIPTTPDTLALLSA 75 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + A+ A+ VG+ + ++ P ++ G D G Sbjct: 76 D-AVLAQPDG---PVGTSFIPLLKPE-----KMGHLMPKVRALAARGVPGFVLDIG---- 122 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 L E +A L +A VP+ L V S Sbjct: 123 -----------------ALAETPPYGPLEWHPRTREDLAELRAAAGVPVWLYGVS---SV 162 Query: 198 MDIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 D E ++G+ + G G + + ++ +I Sbjct: 163 ADAETASEAGLEGIVVHTGAG--LFLGAPATAEVFPEIFD-----------------AVA 203 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 A G +R+G+D+ + + LGA + A+ +LR E +M Sbjct: 204 GTIAVYAGGAVRSGIDVFRYLALGAEAVVV-------------DCDRALHNLRAELAYAM 250 Query: 317 FLLGTKRVQEL 327 L G + ++ Sbjct: 251 RLTGCATLADI 261 >gi|326795694|ref|YP_004313514.1| glutamate synthase (NADPH) [Marinomonas mediterranea MMB-1] gi|326546458|gb|ADZ91678.1| Glutamate synthase (NADPH) [Marinomonas mediterranea MMB-1] Length = 441 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K VG + D++L +K+G + G +G Sbjct: 201 RHPDWTGPDDLAIKILELREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A E Q I SGG+RNG Sbjct: 260 GT-----------AATQDVFIEHVGIPTLAAIPQAVQALQEMGMHRKVQLIVSGGIRNGA 308 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 309 DVAKCMALGADAVAIGTAALVAL 331 >gi|90577894|ref|ZP_01233705.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Vibrio angustum S14] gi|90440980|gb|EAS66160.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Vibrio angustum S14] Length = 389 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 99/367 (26%), Gaps = 77/367 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ RN LI L + + + G+ P IS + + + Sbjct: 35 CNIEMGLKRNTHDIRQIELIPYYLRDYN--SISLQTTLFGETYDAPFGISPV---GLQGL 89 Query: 73 ERIN--RNLAIAAEKTKVAMAV----------------GSQRVMFSDH------------ 102 N LA AA + V + G Sbjct: 90 IWPNAPEILAQAAFEQNVPFILSTVSTSPIEKIADITEGKAWFQLYHPVDDKITDDLLKR 149 Query: 103 ------------NAIKSFELRQ-------YAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + + +F R P + N+ + L+ + + + Sbjct: 150 SEDAGIKTLVLLSDVPTFAYRPKEIRNGLAMPPKMTWQNIIEIMLSPKWALATLKKGQPQ 209 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLS--SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ + + + F K+A L L+LK + + D + Sbjct: 210 FETLSKYMSGSMDMHHLALFMDKTFNGRLSEDKVARLRDKWKGNLVLKGLS---TVEDSQ 266 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + G+ I+ GG S S+E+ + Sbjct: 267 KAIALGLDGIIISNHGGRQLDSGPSTISK-----------------SIEIMDKCKGQITI 309 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLG 320 + G+R+G DI +++ G L F+ + I L+K+ M Sbjct: 310 MMDSGIRDGADIARTLSTGIEFAFLGRSFMYGVGALGHNGGHHTINMLKKQLQQVMEQCC 369 Query: 321 TKRVQEL 327 + V L Sbjct: 370 CESVSNL 376 >gi|323705128|ref|ZP_08116704.1| Glutamate synthase (NADPH) [Thermoanaerobacterium xylanolyticum LX-11] gi|323535554|gb|EGB25329.1| Glutamate synthase (NADPH) [Thermoanaerobacterium xylanolyticum LX-11] Length = 501 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 103/334 (30%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHN 103 L++P++ S+M+ G+ +LA AA++ + G Sbjct: 163 LTLNYPIMFSAMSYGSISYNAH--ASLARAAKELGIYYNTGEGGLHKDFRKYGPNTIVQV 220 Query: 104 AIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 A F + + T + Q + +K + + + + Sbjct: 221 ASGRFGVDREYLKTAAAVEIKIGQGAKPGIGGHLPGEKVSEDISETRM------IPVGSD 274 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DLS I L A D P+ +K + ++G Y I Sbjct: 275 AISPAPHHDIYSIEDLSQLIYSLKEATDYKKPVGVKIAAVNNVAAIASGIARAGADYIAI 334 Query: 214 AG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 G RGGT I I F I + S + + IA+G +R+ D Sbjct: 335 DGFRGGT--GAAPKRIRDNVGIPIEFA---IASVDSRLRSEGIRHTISLIAAGSIRSSAD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 I+K+I LGA + S L ++ Sbjct: 390 IIKAIALGADAVYIGSAALIALGCHMCQQCYTGKCNWGIATQDPNLVKRLNPEIGYKRLI 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I + E + +G ++ L N ++R Sbjct: 450 NLITAWGHEIQEMLGGMGINDIESLKGNRLMLRG 483 >gi|83590848|ref|YP_430857.1| ferredoxin-dependent glutamate synthase [Moorella thermoacetica ATCC 39073] gi|83573762|gb|ABC20314.1| Ferredoxin-dependent glutamate synthase [Moorella thermoacetica ATCC 39073] Length = 472 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 98/295 (33%), Gaps = 67/295 (22%) Query: 44 VDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 VD V + +S P++IS M G LA +EKTK+A+A G+ Sbjct: 116 VDTKVTLGPRAAKPLNISMPIIISGMAYG-----------LA-LSEKTKIALARGASLAG 163 Query: 99 FSDHNAIKSF--ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF------ 150 + + F RQ A H ++ N G N + + ++ Sbjct: 164 TATNTGEGPFLPSERQAARHLIVQYNRGGWNHNP-----RILKQADMVEIQFGQAAIGGL 218 Query: 151 ----------------LHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-----DVPLLLK 189 L + P Q + D + L + + VP+ K Sbjct: 219 GHSTNYGEIPTKGRRLLGIKPGQAAVTHARMPGIKDPKKDLPPLVTRLRHLTGGVPIGAK 278 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 D+ + L++G+ + I G G S IV D+G+PT ++ Sbjct: 279 IGAGNDLEKDLAILLEAGVDFIAIDGAGAASKGSPP----------IVQDDFGVPTVYAV 328 Query: 250 EMA------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 A + + IA GGL D LK + LGA + + L + Sbjct: 329 NRAATFLKKQGVKDRVSLIAGGGLVTPGDFLKILALGADAVYIGTIALFALTHTQ 383 >gi|225016911|ref|ZP_03706103.1| hypothetical protein CLOSTMETH_00824 [Clostridium methylpentosum DSM 5476] gi|224950305|gb|EEG31514.1| hypothetical protein CLOSTMETH_00824 [Clostridium methylpentosum DSM 5476] Length = 501 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 96/337 (28%), Gaps = 69/337 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P+L S+M+ G+ +LA AA + + G + + K+ Sbjct: 163 LELSVPILFSAMSYGSISYNAH--ASLARAATELGIYYNTGEGGLHEDFYQYGKNTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQLNYD------FGVQKA--HQAVHVLGADGLFLHLNP 155 F + + + Q G + A ++ + P Sbjct: 221 ASGRFGVHKEYLEAGAAIEIKIGQGAKPGIGGHLPGTKIVGDISATRMIPEGSDAISPAP 280 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +I + P+++K + +SG I G Sbjct: 281 HHDIYSIEDLRQLVFSLKEATEYKK----PVIVKVAAVHNIAAIASGIARSGADIIAIDG 336 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + RD + GIP L+L + G +RN Sbjct: 337 FRGGTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRGNVSLLVGGSIRN 386 Query: 270 GVDILKSIILGASLGGLASPFLKPA------------------------------MDSSD 299 D++K+I LGA +A+ L S Sbjct: 387 SADVVKAIALGADAVYIATSALLALGCHLCRSCHAGKCNWGIATQRPELVKRLNPDIGSQ 446 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + + E M +G ++ L N ++R Sbjct: 447 RLVNLVTAWEHEIKEMMGGMGINSIEALRGNRLMLRG 483 >gi|288920045|ref|ZP_06414364.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] gi|288348528|gb|EFC82786.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Frankia sp. EUN1f] Length = 337 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I L +P+++K V L + D +++G ++ GG Sbjct: 194 DDITWLRDVSRLPVIVKGV---LRADDALAAVRAGAGAVVVSNHGGRQLDAA-------- 242 Query: 233 DIGIVFQDWGIPTPLSL-EMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IPT +L +AR A+ GG+R GV IL ++ LGA L P Sbjct: 243 ----------IPTATALPAVARALAGTGAEVYVDGGIRGGVHILAALALGARAVLLGRPV 292 Query: 291 LKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A +D V + +L E +M L G + + +L Sbjct: 293 LWALATRGADGVRHLLSTLTAELRHAMTLAGARSLDDL 330 >gi|332976467|gb|EGK13313.1| exopolyphosphatase [Desmospora sp. 8437] Length = 493 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 115/373 (30%), Gaps = 88/373 (23%) Query: 25 FFDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERIN 76 +D + L P ++D + KL PLL+ + G + E + Sbjct: 122 GWDRVMFLPAQLAVMPSKEHVKIDTRTVIGPRAPRPLKLEIPLLVGGL-GPGPTLSEPMK 180 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 LA + A G A+ E R+ V + G Sbjct: 181 EALAKGSRAAGTATHTG--------EGALTEAERREADKVVVQYGRADWNRPPETLGQAD 232 Query: 137 AHQAVHVLGADG--------------LFLHLNPL------QEIIQPNGNTNFADLSSKIA 176 + V GA L LNP + N ++ +L +++ Sbjct: 233 MIEIVAGSGATSGTPFTIPKVPGTMRQLLGLNPGESLEIRSRVPGVNRPEDWRELVARLQ 292 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + VP+ +K V + + D+ L +G+ + I G G + Sbjct: 293 EVGK--GVPVGIKLVPSRIEA-DLARALDAGVDFITIDGAG-----------SGVRESAP 338 Query: 237 VFQD-WGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + QD +G+P L + I SGGL D LK++ LGA L P Sbjct: 339 ILQDDFGLPAIRGLVRAVRFLEKHVARHRVSLIVSGGLTTPGDYLKALALGADAVALDLP 398 Query: 290 FLKPAMDSS------------------------------DAVVAAIESLRKEFIVSMFLL 319 + A+ + ++V +S +E ++ L Sbjct: 399 LVMGAVHTQITKVLPWEPPSGLIWYDGKFADRLDVDQAAESVSNLFKSSVEEMKLATIAL 458 Query: 320 GTKRVQELYLNTA 332 G K ++E+ + Sbjct: 459 GKKALREVNRDDL 471 >gi|83951950|ref|ZP_00960682.1| glutamate synthase large subunit-like protein [Roseovarius nubinhibens ISM] gi|83836956|gb|EAP76253.1| glutamate synthase large subunit-like protein [Roseovarius nubinhibens ISM] Length = 449 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 34/255 (13%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFEL 110 +L P+ I+ M+ G + LA A A G +++ ++ Sbjct: 87 LELDIPVYITGMSFGALSYEAK--TALARGATMAGTATCSGEGGMIPDERRYSSKWFYQC 144 Query: 111 RQ----YAPHTVLISNLGAVQLNYD--FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 Q + P+ +++++ + G+ V L + P Sbjct: 145 IQSRYGFNPNHLVLADACEFFIGQGCKVGLGGHLMGQKVTDQVAEMRSLPAGIDQRSPAR 204 Query: 165 NTNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGG 218 + ++ KI + A D +P+ LK +G D+ + +K I G GG Sbjct: 205 HPDWLGPDDLALKIQEIREATDWQIPIQLK-LGASRVYDDVRMAVKCDPDSIYIDGMEGG 263 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 T + +D G+P ++ AR ++ + +GG+RNG D Sbjct: 264 T---------GAGPHLAT--EDTGVPGMAAIRQARKAIDDLGKRGEISLVYAGGIRNGAD 312 Query: 273 ILKSIILGASLGGLA 287 + K+I LGA + Sbjct: 313 VAKAIALGADAIAIG 327 >gi|257451900|ref|ZP_05617199.1| glycolate oxidase [Fusobacterium sp. 3_1_5R] gi|317058451|ref|ZP_07922936.1| glycolate oxidase [Fusobacterium sp. 3_1_5R] gi|313684127|gb|EFS20962.1| glycolate oxidase [Fusobacterium sp. 3_1_5R] Length = 315 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 46/284 (16%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNL- 79 N+++ DD H+ R L I + + G+ P++ M ++ ++R Sbjct: 29 YNRRYLDDIHVEMRVLDSI---KPSLRTKIFGETFDSPIM---MPAFSHLNKVGVDRKKP 82 Query: 80 ----AIAAEKTK----VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 A AA++ V M + + A ++ + H++++ + + + Sbjct: 83 MLHYAFAAKELNMLNWVGMEPNDEFEEILEAGARTVRIIKPFMDHSIILEQIAFAETHNA 142 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 V V + PL + + ++ +P + K V Sbjct: 143 TAVGIDIDHVPGSNGKYDVVDGIPL-----------GPVTTEDLKSYVNSTSLPFVAKGV 191 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 LS D ++G++ I+ G I + I + GI Sbjct: 192 ---LSVQDALKAKEAGVKAIVISHHHGRIPFGIP-PIQVLPRIKEALKGSGI-------- 239 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 G + +G D+ K++ LGA + L P + Sbjct: 240 --------FIFVDGSMESGYDVYKALALGADAVSVGRAILAPLL 275 >gi|302867934|ref|YP_003836571.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Micromonospora aurantiaca ATCC 27029] gi|302570793|gb|ADL46995.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Micromonospora aurantiaca ATCC 27029] Length = 367 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 20/120 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + VPLL+K + L D +G+ ++ GG + + Sbjct: 222 WADLDWLRARTPVPLLVKGI---LDPRDAVRAADAGVDAVVVSNHGGRQLDAAPASAAVL 278 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + G+R GVD+L+++ LGA L P L Sbjct: 279 PEV-----------------VAAVDQRCAVLLDSGVRGGVDVLRALALGADGVLLGRPLL 321 >gi|115398191|ref|XP_001214687.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192878|gb|EAU34578.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 421 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 26/168 (15%) Query: 169 ADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 A KI L P +K V S D ++ G+ ++ G Sbjct: 257 AWSWEKIPWLRDQWKRISGGRPFAIKGVQ---SVADARKCVEYGVDGIVVSNHAGRQVDG 313 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D I + + G+R D++K++ LGA Sbjct: 314 AVASLDALESI-----------------VDAVGDRIYVMFDSGVRGASDVVKALALGARF 356 Query: 284 GGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + ++ + V + SL +F + M + G RV+E + Sbjct: 357 VFVGRLWVWGLSIMGEEGVRHVMRSLLADFDILMAVGGFTRVEEFDRS 404 >gi|254451529|ref|ZP_05064966.1| L(+)-mandelate dehydrogenase [Octadecabacter antarcticus 238] gi|198265935|gb|EDY90205.1| L(+)-mandelate dehydrogenase [Octadecabacter antarcticus 238] Length = 366 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 95/328 (28%), Gaps = 74/328 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ G RN+ FDD L R L + +V + P IS M G N Sbjct: 31 AGREIGAARNRAAFDDLELRPRIL--RDVSDRSLAVPLFDQTAKVPFGISPM-GMCNLSA 87 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDH-----------------NAIKSFELRQYAP 115 + LA A + V + V + + + +F+L + A Sbjct: 88 PGADMMLARLAAREHVPLGVSTVASTAMEPLIEAAEGHAWFQLYFTGDGDGTFKLVERAK 147 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ------------------ 157 + + V + + + + + + P Q Sbjct: 148 AAGYETIILTVDV-----PEVGRRPRELRHGFTMPFKIGPRQFLDFACHPRWSLTALAKG 202 Query: 158 -------EIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 ++ + + +A L L++K V L + D + +G Sbjct: 203 KPQMANFDMDGYEFDRTESRAKANWNTLAQLRDMWPGKLVVKGV---LDAQDALMLRDAG 259 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 + ++ G +DI + + GL Sbjct: 260 VDAIQVSSHGSRQLDSAPPPITALADI-----------------RQAVGPDVPLFYDTGL 302 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAM 295 R+G D++K+ GA+ L L+ A+ Sbjct: 303 RSGEDVVKAFQQGANFTFLGR-ILQFAI 329 >gi|297619955|ref|YP_003708060.1| Glutamate synthase (NADPH) [Methanococcus voltae A3] gi|297378932|gb|ADI37087.1| Glutamate synthase (NADPH) [Methanococcus voltae A3] Length = 510 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 101/340 (29%), Gaps = 73/340 (21%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK----- 106 KL P++I M+ G + + +A A ++ M G + + Sbjct: 171 NLKLDTPIMIGHMSYGAISLNSH--KAMARAVKRCGTFMGTGEGGLHRDLYEYSDNIITQ 228 Query: 107 ---------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 S L + A + I + +K V + + Sbjct: 229 VASGRFGVNSEYLSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRM------IPEGS 282 Query: 158 EIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + I P + + + L+ S +P+ +K + S Sbjct: 283 DAISPAPHHDIYSIEDLAQLVRSLKEATRWKLPVFVKISAVHNVAAIANGIATSDADAVV 342 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGG 266 I G G + + + RD + GIP +++ + N+ IASGG Sbjct: 343 IDGFKGGTGAAPKVFRD----------NVGIPIEVAISAVDDRLREQGNRNKISVIASGG 392 Query: 267 LRNGVDILKSIILGASLGGLASPFLKP------------------------------AMD 296 +RN D+ KSI LGA + + + + Sbjct: 393 IRNSADVFKSIALGADAVYIGTAAMIAMGCTVCGRCYGGKCCWGIATQRADLVERLDIEE 452 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++D V I + E + G ++ L N +R Sbjct: 453 AADRVSNLIGAWTHEIKELLGAAGINSIESLRGNRDRLRG 492 >gi|256829420|ref|YP_003158148.1| glutamate synthase [Desulfomicrobium baculatum DSM 4028] gi|256578596|gb|ACU89732.1| Glutamate synthase (ferredoxin) [Desulfomicrobium baculatum DSM 4028] Length = 1519 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 112/352 (31%), Gaps = 73/352 (20%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV----------AM 90 + VD S+ G + PLLI +M+ G+ E R A AA K + Sbjct: 858 LENVDISI---GSH-AMPLLICAMSFGSQ--GESSFRAYAEAARKVNIICMNGEGGEIPD 911 Query: 91 AVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 +G R A F + L +G + G + ++ Sbjct: 912 MLGKYRENRGQQVASGRFGVSMELLNSSNYLEIKVGQGAKPGEGGHLPGSKVTDMV---A 968 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 H P +I P+ + + + + + + + + +K + Sbjct: 969 QARHCKPGIALISPSNHHDIYSIED-LCQIITELKTANPFARISVKIPVTSGVATIAVGV 1027 Query: 204 LKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+G +I+G GGT + R+ + + G+ + ++ + Sbjct: 1028 AKAGAHIVNISGFEGGTG-----AAREHAKKYVGLPVEIGVTQAHRGLVEAGLRHQVELW 1082 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFL------------------------------- 291 GG+R+G D++K I LGA G+ + L Sbjct: 1083 CDGGVRSGADVVKLICLGADRVGVGTVALMGVGCISCEQCHLDVCPRGISTQLRSVEEAT 1142 Query: 292 -------KPAMDSSDA--VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 KP +A + + + + + LG KR+ +L T L+ Sbjct: 1143 KRGLKLFKPLQGEVEAENLARLLRAFGDQIRHILAGLGEKRLSDLVGRTDLL 1194 >gi|226361954|ref|YP_002779732.1| hypothetical protein ROP_25400 [Rhodococcus opacus B4] gi|226240439|dbj|BAH50787.1| hypothetical protein [Rhodococcus opacus B4] Length = 438 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG + D++L +K+G + G +G Sbjct: 199 RHPDWTGPDDLAIKIIELREITNWEKPIYIK-VGATRTYYDVKLAVKAGADVVVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A E Q I SGG+R+G Sbjct: 258 GT-----------AATQDVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRSGA 306 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+S E L Sbjct: 307 DVAKAMALGADAVAIGTAALIALGDNSPRYAKHYEEL 343 >gi|71083996|ref|YP_266716.1| glutamate synthase large subunit-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762940|ref|ZP_01264905.1| glutamate synthase large subunit-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|71063109|gb|AAZ22112.1| glutamate synthase large subunit-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91718742|gb|EAS85392.1| glutamate synthase large subunit-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 474 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 86/260 (33%), Gaps = 32/260 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELR 111 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 113 ELDIPVYITGMSFGALSYEAK--TALARGATMAGSATCSGEGGMIPDERRYSEKWYYQCI 170 Query: 112 Q----YAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGN 165 Q + PH +++ V + V V L + P + Sbjct: 171 QSRYGFNPHHAQLADAIEVFIGQGQKVGMGGHLMGQKVTDQVAEMRSLPSGIDQRSPARH 230 Query: 166 TNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ K+ L VP+ LK +G D+ + K + G G++ Sbjct: 231 PDWLGPDDLALKVEELRQLTKNKVPIQLK-LGASKVYDDVRMAAKCNPDSIFLDGMEGST 289 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGVDIL 274 + I + GIP ++ AR ++ I +GG+R+G D+ Sbjct: 290 GAGP----------HIAAANTGIPGIAAIREARRAIDDVGKTGQVTLIYAGGIRDGADMA 339 Query: 275 KSIILGASLGGLASPFLKPA 294 K++ LGA + + L Sbjct: 340 KALALGADAIAIGTGALIAL 359 >gi|169832165|ref|YP_001718147.1| glutamate synthase [Candidatus Desulforudis audaxviator MP104C] gi|169639009|gb|ACA60515.1| Glutamate synthase (NADPH) [Candidatus Desulforudis audaxviator MP104C] Length = 530 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 103/337 (30%), Gaps = 73/337 (21%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS------- 107 L PL+ +M+ G + + + LA AA+ + M G + + Sbjct: 194 LETPLVFPAMSYGAISLNAQ--KALARAAKACGIVMNTGEGGMHEDLYPFADWMIVQVAS 251 Query: 108 --FEL-----RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 F + R+ A + I + +K + V + + + Sbjct: 252 GRFGVNPGYLRRSAAVEIKIGQGAKPGIGGHLPGEKVDEGVSKTRM------IPVGSDAL 305 Query: 161 QPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + + DLS I L A + P+ +K + ++G I G Sbjct: 306 SPAPHHDIYSIEDLSQLIYALKEATEYAKPVSVKIAAVHNVAAIASGIARAGADIITIDG 365 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + + RD GIP ++L N+ + SGG+R+ Sbjct: 366 FRGGTGATPLAIRDH----------VGIPIEMALAAVDDRLRQEGIRNQVSLVVSGGIRH 415 Query: 270 GVDILKSIILGASLGGLASPFLKPA------------------------------MDSSD 299 D+ K+I LGA + + L +++ Sbjct: 416 SGDVAKAIALGADAVAIGTAALIAMGCRLCQKCYTGNCSWGITTQKAHLTQRLDPDRAAE 475 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + I E + LG V+ L + +R Sbjct: 476 NLTNLIRGWSLELKEILGALGLNAVESLRGSRLRLRG 512 >gi|145595005|ref|YP_001159302.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Salinispora tropica CNB-440] gi|145304342|gb|ABP54924.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Salinispora tropica CNB-440] Length = 368 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 77/250 (30%), Gaps = 50/250 (20%) Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL----GAVQLNYDFGVQ 135 A AA T + + V + + SF + P V+ +NL G++ GV Sbjct: 152 AEAAGCTALMLTVDVPILGRRLRDVRNSFAI----PADVVAANLPTGRGSLAHAATPGVS 207 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + A + + L VPL++K V L Sbjct: 208 AVAAHTGAVFAPAVS---------------------WDDLEWLRERTSVPLVVKGV---L 243 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D + G ++ GG + + Sbjct: 244 DPRDATRAVAVGADAVVVSNHGGRQLDGAPATATALP-----------------AVVDAV 286 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIV 314 + + + G+R G+D+L+++ LGA + P L A AA+ L EF Sbjct: 287 GDRCEVLLDSGVRGGMDVLRALALGAHGVLVGRPLLWALAAGGRSGAEAALSLLADEFRD 346 Query: 315 SMFLLGTKRV 324 ++ L G V Sbjct: 347 ALTLAGCADV 356 >gi|254489918|ref|ZP_05103113.1| hypothetical protein MDMS009_249 [Methylophaga thiooxidans DMS010] gi|224465003|gb|EEF81257.1| hypothetical protein MDMS009_249 [Methylophaga thiooxydans DMS010] Length = 443 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + VP+ +K VG + D++L +K+G + G +G Sbjct: 202 RHPDWTGPDDLEIKIKELREITDWQVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQG 260 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A E Q I SGG+RNG Sbjct: 261 GT-----------AATQDVFIEHVGIPTMAAIPQAVQALQEMGMHRKVQLIVSGGIRNGA 309 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K + LGA + + + D+ + L Sbjct: 310 DVAKCMALGADAVAIGTAAMVALGDNDPKWEEEYQKL 346 >gi|213023257|ref|ZP_03337704.1| hypothetical protein Salmonelentericaenterica_11985 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 104 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 20/116 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+++K + S D E+ +++G ++ GG S D+ I Sbjct: 4 GLPVIVKGIQ---SPEDAEIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLPAI-------- 52 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 A+ I G+R G + K++ GA + + P L Sbjct: 53 ---------AKVVNKRVPVIFDSGVRRGSHVFKALASGADIVAVGRPVLYGLNLGG 99 >gi|291543381|emb|CBL16490.1| glutamate synthase (NADPH) GltB2 subunit [Ruminococcus sp. 18P13] Length = 501 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 102/334 (30%), Gaps = 65/334 (19%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHNA 104 KLS P++ S+M+ G+ +LA AA++ + G A Sbjct: 164 KLSVPIMFSAMSYGSISYNAH--ASLARAAQELGILYNTGEGGLHEDFVKYGANTIVQVA 221 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 F + + + + Q G+ ++G + + I P Sbjct: 222 SGRFGVHKGYLESGAAIEIKMGQ-GAKPGIGGHLPGAKIVGDVAKTRMVPVGSDAISPAP 280 Query: 165 NTNFADLSSKIALLSSAMD------VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + L ++ P+++K S +SG I G G Sbjct: 281 HHDIYSIED-LRQLVYSLKEATGYTKPVIVKIAAVHNISAIASGIARSGADIIAIDGFRG 339 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N + G +R+ D Sbjct: 340 GTGAAPTRIRD----------NVGIPIELALASVDKRLRDEGIRNNVSIVVGGSIRSSAD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K+I LGA + + L +V Sbjct: 390 MVKAIALGADAVYIGTAALLALGCHLCRSCQTGKCNWGIATQRPELVKRLNPEIGYQRLV 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + R E + M +G ++ L N ++R Sbjct: 450 NLVTAWRHELMELMGGMGINSIESLRGNRLMLRG 483 >gi|111019808|ref|YP_702780.1| glutamate synthase large subunit [Rhodococcus jostii RHA1] gi|110819338|gb|ABG94622.1| probable glutamate synthase large subunit [Rhodococcus jostii RHA1] Length = 438 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG + D++L +K+G + G +G Sbjct: 199 RHPDWTGPDDLAIKIIELREITNWEKPIYIK-VGATRTYYDVKLAVKAGADVVVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A E Q I SGG+R+G Sbjct: 258 GT-----------AATQDVFIEHVGIPTLAAIPQAVQALQELGVHRKVQLIVSGGIRSGA 306 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+S E L Sbjct: 307 DVAKAMALGADAVAIGTAALIALGDNSPRYAKQYEEL 343 >gi|241149920|ref|XP_002406249.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215493837|gb|EEC03478.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 83 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 17/97 (17%) Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 D E +K G+ ++ GG + + ++ +I R Sbjct: 1 EDAEEAVKRGVSAIIVSNHGGRQLDGVPATIEILPEI-----------------VRAVGG 43 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + GG+R+G D++K++ LGA + P L Sbjct: 44 RIEIYVDGGVRHGTDVIKALALGAKAVFVGRPTLWAL 80 >gi|89055269|ref|YP_510720.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] gi|88864818|gb|ABD55695.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Jannaschia sp. CCS1] Length = 384 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 23/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L + +LK V + G+ ++ G + Sbjct: 243 WEYVAALRDRWESAFVLKGV---CEPDVAARAQQEGVDAIWVSTHAGRQFD--------- 290 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G P ++ + + G+ G+D+L+++ LGA + + Sbjct: 291 ----------GAPGAAAMLPGIRAATDLPIVFDSGVEGGLDVLRALALGADFVMMGRAWH 340 Query: 292 KPAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++ + L ++ +M +G + + +L Sbjct: 341 YALGALGAEGPAHWHDVLVRDMASNMAQIGARTLADL 377 >gi|295696580|ref|YP_003589818.1| ferredoxin-dependent glutamate synthase [Bacillus tusciae DSM 2912] gi|295412182|gb|ADG06674.1| ferredoxin-dependent glutamate synthase [Bacillus tusciae DSM 2912] Length = 483 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 36/271 (13%) Query: 53 KKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA----IKS 107 LS P++I++M+ GG +I LA AA + A G ++ + A I Sbjct: 109 LTLSIPIVIAAMSFGGALSKRAKI--ALAKAASQIGTATNTGEAGLLEEEREAAELLIGQ 166 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGAD-----GLFLHLNPLQEI 159 F + L A+++ G Q + AVH +G D GL + + Sbjct: 167 FNRGGWMNRPEQYRRLDAIEIQLGQGAQGSASQRTAVHNIGEDYRRVFGLAEGQSAVIHS 226 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GG 218 P + D + + L + VP+ LK ++++ L++G+ + I G GG Sbjct: 227 RLPGVDR-PEDFVALVQRLRAETGVPVGLKIAATHHLEEEMQIALEAGVDFITIDGAEGG 285 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPT------PLSLEMARPYCNEAQFIASGGLRNGVD 272 T + D G+PT + + +A+GGL Sbjct: 286 THGGSP-----------TLQDDVGLPTLFAVSRAADVLAQKKVRGRVSLLAAGGLITPGQ 334 Query: 273 ILKSIILGASL--GGLASPFLKPAMDSSDAV 301 +LK++ LGA G A+ F + +A+ Sbjct: 335 MLKALALGADAVYVGTAALFAMVSDQMVEAL 365 >gi|167751146|ref|ZP_02423273.1| hypothetical protein EUBSIR_02131 [Eubacterium siraeum DSM 15702] gi|167655861|gb|EDR99990.1| hypothetical protein EUBSIR_02131 [Eubacterium siraeum DSM 15702] Length = 501 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 98/337 (29%), Gaps = 69/337 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P++ S+M+ G+ +LA AA + + G + + + Sbjct: 163 LELSTPIMFSAMSYGSISRNAH--ESLARAATELGIFYNTGEGGLHKDFYQYGPNTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAV---HVLGADGLFLHLNP 155 F + + T + Q + K + V ++ + P Sbjct: 221 ASGRFGVFKDYLETGAAIEIKMGQGAKPGIGGHLPGAKILEDVSRTRMIPMGTDAISPAP 280 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +I + P+++K + +SG I G Sbjct: 281 HHDIYSIEDLRQLVLSLKEATEYKK----PVIVKIAAVHNVAAIASGIARSGADIIAIDG 336 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + RD + GIP L+L NE + +G +R+ Sbjct: 337 YRGGTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRNEVSVVVAGSIRS 386 Query: 270 GVDILKSIILGASLGGLASPFLKPA------------------------------MDSSD 299 D++K+I LGA + + L Sbjct: 387 SSDVVKAIALGADACYIGTAALLALGCHLCRSCQTGKCNWGIATQRPDLVKRLNPNIGYQ 446 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + + E M +G V+ L N ++R Sbjct: 447 RLVNLVHAWDHEIKEMMGGMGINSVEALKGNRLMLRG 483 >gi|153813948|ref|ZP_01966616.1| hypothetical protein RUMTOR_00155 [Ruminococcus torques ATCC 27756] gi|145848344|gb|EDK25262.1| hypothetical protein RUMTOR_00155 [Ruminococcus torques ATCC 27756] Length = 418 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 108/334 (32%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P++ S+M+ G+ ++LA+AA++ + G + + ++ Sbjct: 80 LELSMPVMFSAMSYGSISYNAH--KSLALAAKELGILYNTGEGGLHEDFYCYGENTIVQV 137 Query: 108 ----FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + + + + Q G+ ++G + + I P Sbjct: 138 ASGRFGVHEKYLNAGAGIEIKMGQ-GAKPGIGGHLPGTKIVGDVSRTRMIPEGSDAISPA 196 Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ S P+++K + +SG I G G Sbjct: 197 PHHDIYSIEDLRQLVCSLKEATEYKKPIIVKVAAVHNIAAIASGIARSGADIIAIDGFRG 256 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N +A G +R+ D Sbjct: 257 GTGAAPTRIRD----------NVGIPVELALAAVDQRLRDEGIRNHVSLVAGGSIRSASD 306 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K++ LGA +A+ L S ++ Sbjct: 307 VVKAVALGADACYVATAALLALGCHLCRTCQSGKCNWGIATQNPELVERLDPQTGSRRLI 366 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E M +G ++ L N ++R Sbjct: 367 NLMTAWKHEIKELMGGMGINSIEALRGNRLMLRG 400 >gi|315505662|ref|YP_004084549.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Micromonospora sp. L5] gi|315412281|gb|ADU10398.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Micromonospora sp. L5] Length = 367 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 20/120 (16%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + L + VPLL+K + L D +G+ ++ GG + + Sbjct: 222 WADLEWLRARTRVPLLVKGI---LDPRDAVRAADAGVDAVVVSNHGGRQLDAAPASAAVL 278 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + G+R GVD+L+++ LGA L P L Sbjct: 279 PEA-----------------VAAVDQRCAVLLDSGVRGGVDVLRALALGADGVLLGRPLL 321 >gi|149920957|ref|ZP_01909418.1| glutamate synthase domain protein [Plesiocystis pacifica SIR-1] gi|149818229|gb|EDM77684.1| glutamate synthase domain protein [Plesiocystis pacifica SIR-1] Length = 411 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 104/267 (38%), Gaps = 39/267 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L+ PL+I+ M+ G+ + LA AE A+ G + + D A S L Q Sbjct: 73 LELTIPLMIADMSFGSLSREAK--TALAKGAELAGAAICSG-EGGILKDEKAQSSRYLYQ 129 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQ-----AVHVLGADGLFLHLNPL----------Q 157 + + G Q H A G ++P+ + Sbjct: 130 LGTGEFGYETMAGEERPRWHGAQAFHFKGGQGAKTGTGGHLPGAKVSPMIAKTRGKEKGK 189 Query: 158 EIIQP---NGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 +II P + D +++ + AM DVP+ K + DI+ L+ G Y + Sbjct: 190 DIISPPTFETMRSVEDFQARVETVKEAMGDVPIGFKLSANRIE-DDIDFALRVGADYIIL 248 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN------EAQFIASGGL 267 GRGG + + RD S +PT ++ AR Y + + IA+GGL Sbjct: 249 DGRGGATGAAPILFRDHIS----------VPTMAAIVRARRYIDAHPKGAGVKLIATGGL 298 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA 294 R D +K++ LGA LA+ L+ Sbjct: 299 RVPTDFVKAMALGADGVALANTALQAL 325 >gi|89895936|ref|YP_519423.1| hypothetical protein DSY3190 [Desulfitobacterium hafniense Y51] gi|89335384|dbj|BAE84979.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 466 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 126/368 (34%), Gaps = 76/368 (20%) Query: 26 FDDWHLIHRALPEISFDE---VDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 FD+ I L + + +D S + +LS PLLI M G + E+ Sbjct: 99 FDNLMFIPAQLVRLPVEREVPIDVSATLGPRVEKPMQLSIPLLIGGM-GYGVALSEKAKV 157 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISNLGAVQLNYD 131 LA AA++ A G + + NA F P + +++ VQ+ Sbjct: 158 ALAKAAKQVGTATNSGEGPFLAEERNAAGKFIWQISRYDYGRNPQGIAEADMVEVQMGQG 217 Query: 132 --------FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + + +A ++G + PL+ + G + D + L Sbjct: 218 SRLGAHILYPQEIKGKAQKLMGISPVV----PLKGYAKLPGINSPLDWPRYVEELRQEAG 273 Query: 184 V-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K +G G D+ + +++G I G GGT+ S + D+ Sbjct: 274 GKPIGIKIMGGGRLEADLAVAIEAGFDVICIGGAQGGTAASSP-----------TISDDF 322 Query: 242 GIPTPLSLEMARPY------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 G+P+ +L A+ Y +E IASGG LK+I LGA L + L + Sbjct: 323 GLPSLYNLVRAQRYLIEQGVRHEVSLIASGGYDTPGKCLKAIALGADAVNLGTVPLFALV 382 Query: 296 DSS------------------------------DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 V ++S E + LG K + Sbjct: 383 HKQIGKVMPWEPLTQLVYYNSKYKERLDVELAAQNVANVLQSFVLEMEEGIRALGKKSIH 442 Query: 326 ELYLNTAL 333 +L N + Sbjct: 443 DLGPNDLV 450 >gi|260654338|ref|ZP_05859828.1| glutamate synthase domain protein [Jonquetella anthropi E3_33 E1] gi|260630971|gb|EEX49165.1| glutamate synthase domain protein [Jonquetella anthropi E3_33 E1] Length = 456 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 31/259 (11%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF---- 108 +LS P+ +S M+ G ++ LA+ A A G ++ + A + Sbjct: 128 LELSGPVYVSHMSFGALSKEAKV--ALALGASAVGTATCSGEGGILPEERAAAAKYIFEY 185 Query: 109 --ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNG 164 + ++ +++ V + Q+I+ P+ Sbjct: 186 IPNQYSVNDENLQAADAVEIKVGQGTKPGMGGHLPGAKVTEEIARIRNKPVGQDILSPSR 245 Query: 165 NTNFADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + S + L S++ P+ +K + G D+ L + + I GRGG Sbjct: 246 YRDI-NSPSDMKDLVSSLRRRSKGRPIGIK-IAAGHVENDLAFCLAAEPDFITIDGRGGA 303 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILK 275 + S R+ + +PT +L AR + ++ Q + +GGLR D+ K Sbjct: 304 TGSSPLILREATT----------VPTISALCRARRFLDQKGSGVQLVITGGLRISADVAK 353 Query: 276 SIILGASLGGLASPFLKPA 294 +I LGA +A+ L Sbjct: 354 AIALGADAVAMATAPLIAL 372 >gi|308126438|ref|ZP_05910094.2| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AQ4037] gi|308108968|gb|EFO46508.1| glutamate synthase (ferredoxin) [Vibrio parahaemolyticus AQ4037] Length = 469 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 110/293 (37%), Gaps = 48/293 (16%) Query: 41 FDEVDPSVEFL-------GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 ++V S E + KL+ PLL+S ++ G +I LA AE + G Sbjct: 115 LEDVPVSTELIVGPNARKPLKLAIPLLVSDISFGALSEEAKI--ALAKGAELAGTGICSG 172 Query: 94 SQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ-------AVHVL 144 + M + A S F A S L VQ + G Q A A + Sbjct: 173 -EGGMLPEEQAANSRYFYELASAKFGYDESKLLKVQAFHFKGGQGAKTGTGGHLPANKNV 231 Query: 145 GADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 G + Q I P + +F + ++ ++ +P+ K + Sbjct: 232 GKISQVRGIPEGQPAISPPTFTDLHTTHDFRKFADRVRGITG--GIPIGFKLSANHIE-Q 288 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 DI+ L + Y + GRGG + + RD S +PT +L AR Y +E Sbjct: 289 DIQFALDASADYIILDGRGGGTGAAPTMFRDHIS----------VPTIPALARARKYLDE 338 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 I +GGLR +D +K++ LGA +A+ AM S V A I Sbjct: 339 KGASDRVTLIITGGLRVPMDFVKALALGADGVAIAN----SAMQSIGCVAARI 387 >gi|262204602|ref|YP_003275810.1| ferredoxin-dependent glutamate synthase [Gordonia bronchialis DSM 43247] gi|262087949|gb|ACY23917.1| ferredoxin-dependent glutamate synthase [Gordonia bronchialis DSM 43247] Length = 447 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 72/192 (37%), Gaps = 41/192 (21%) Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 L + A + G D L + +N L+EI + + P+ Sbjct: 191 TLPEGIDQRSACRHPDWTGPDDLAIKINELREI--------------------TDWEKPI 230 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K VG + D++L + SG + G G + + E + GIPT Sbjct: 231 YVK-VGATRTYYDVKLAVHSGADVVVVDGMQGGTAATQEVFIEH----------VGIPTL 279 Query: 247 LSLEMA----------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 ++ A R + Q I SGG+RNG D+ K++ LGA + + L D Sbjct: 280 AAIPQAVQALAELGVHRAGKDGVQLIVSGGIRNGADVAKAMALGADAVAIGTAALIALGD 339 Query: 297 SSDAVVAAIESL 308 + A E+L Sbjct: 340 NDPRYAAEYEAL 351 >gi|54024069|ref|YP_118311.1| putative glutamate synthase [Nocardia farcinica IFM 10152] gi|54015577|dbj|BAD56947.1| putative glutamate synthase [Nocardia farcinica IFM 10152] Length = 442 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG + D++L +K+G + G +G Sbjct: 200 RHPDWTGPDDLAIKIVELREITDWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQG 258 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A E Q I SGG+R+G Sbjct: 259 GT-----------AATQDVFIEHVGIPTLAAIPQAVQALQELGVHRSVQLIVSGGIRSGA 307 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 308 DVAKAMALGADAVAIGTAALIAL 330 >gi|119387767|ref|YP_918801.1| (S)-2-hydroxy-acid oxidase [Paracoccus denitrificans PD1222] gi|119378342|gb|ABL73105.1| (S)-2-hydroxy-acid oxidase [Paracoccus denitrificans PD1222] Length = 394 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 21/158 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + PL++K + L D G ++ GG + + D+ Sbjct: 247 CWQDLEACRALWPGPLIVKGI---LHPEDARRAASLGADAIMVSNHGGKALDAAPAALDM 303 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I + G+R G DI+ ++ LGA P Sbjct: 304 LPAI-----------------RHAVGPDYPLFLDSGVRRGSDIVIALCLGADFVFAGRPT 346 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A + A+ LR+E + M +G EL Sbjct: 347 LYGTAAGAEAGARKALSILRQETDLVMAGIGCTSPAEL 384 >gi|219670369|ref|YP_002460804.1| ferredoxin-dependent glutamate synthase [Desulfitobacterium hafniense DCB-2] gi|219540629|gb|ACL22368.1| ferredoxin-dependent glutamate synthase [Desulfitobacterium hafniense DCB-2] Length = 466 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 126/368 (34%), Gaps = 76/368 (20%) Query: 26 FDDWHLIHRALPEISFDE---VDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 FD+ I L + + +D S + +LS PLLI M G + E+ Sbjct: 99 FDNLMFIPAQLVRLPVEREVPIDVSATLGPRAEKPMQLSIPLLIGGM-GYGVALSEKAKV 157 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISNLGAVQLNYD 131 LA AA++ A G + + NA F P + +++ VQ+ Sbjct: 158 ALAKAAKQVGTATNSGEGPFLAEERNAAGKFIWQISRYDYGRNPQGIAEADMLEVQMGQG 217 Query: 132 --------FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + + +A ++G + PL+ + G + D + L Sbjct: 218 SRLGAHILYPQEIKGKAQKLMGISPVV----PLKGYAKLPGINSPLDWPRYVEELRQEAG 273 Query: 184 V-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K +G G D+ + +++G I G GGT+ S + D+ Sbjct: 274 GKPIGIKIMGGGRLEADLAVAIEAGFDVICIGGAQGGTAASSP-----------TISDDF 322 Query: 242 GIPTPLSLEMARPY------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 G+P+ +L A+ Y +E IASGG LK+I LGA L + L + Sbjct: 323 GLPSLYNLVRAQRYLIEQGVRHEVSLIASGGYDTPGKCLKAIALGADAVNLGTVPLFALV 382 Query: 296 DSS------------------------------DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 V ++S E + LG K + Sbjct: 383 HKQIGKVMPWEPLTQLVYYNSKYKERLDVELAAQNVANVLQSFVLEMEEGIRALGKKSIH 442 Query: 326 ELYLNTAL 333 +L N + Sbjct: 443 DLGPNDLV 450 >gi|78485688|ref|YP_391613.1| ferredoxin-dependent glutamate synthase [Thiomicrospira crunogena XCL-2] gi|78363974|gb|ABB41939.1| glutamate synthase (NADPH) GltB2 subunit [Thiomicrospira crunogena XCL-2] Length = 441 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 100/311 (32%), Gaps = 52/311 (16%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD--------EVDPSVEFLGK--KLSFPLLISSMTGG 67 G R FDD + ++ + +V F K KL + I+ M+ G Sbjct: 37 GAKRKVPHFDDLLFLGASMSRYPLEGYREKCGTDVTLGTRFAKKPIKLDTVVTIAGMSFG 96 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + L A +A + K+ + + Sbjct: 97 ALSANAK--EALGRGA---NLAGTSTTTGDGGMTPEERKT-SKTLVYQYLPSRYGMNPDD 150 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----PNG--------NTNFADLSSKI 175 L ++ G G+ L + Q P G + ++ Sbjct: 151 LRKADAIEVVLGQGAKPGGGGMLLGQKISDRVAQMRNLPKGIDQRSACRHPDWTGPDDLA 210 Query: 176 ALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRD 229 + + +VP+ +K +G + D++L +K+G + G +GGT Sbjct: 211 IKIQELREITDWNVPIYIK-IGATRTYYDVKLAVKAGADVIVLDGMQGGT---------- 259 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASL 283 + + + GIPT +L A E Q I SGG+R+G D+ K + LGA Sbjct: 260 -AATQDVFIEHVGIPTMAALPQAVRALQEMGMHRKVQLIVSGGIRSGADVAKCMALGADA 318 Query: 284 GGLASPFLKPA 294 + + L Sbjct: 319 VAIGTAALVAL 329 >gi|210610321|ref|ZP_03288350.1| hypothetical protein CLONEX_00540 [Clostridium nexile DSM 1787] gi|210152551|gb|EEA83557.1| hypothetical protein CLONEX_00540 [Clostridium nexile DSM 1787] Length = 501 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +LS P++ S+M+ G+ +LA AA + + G + + ++ Sbjct: 163 LELSMPIMFSAMSYGSISYNAH--ESLARAASELGIFYNTGEGGLHEDFYCYGENTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + + + + Q G+ ++G + + I P Sbjct: 221 ASGRFGVHEEYLNAGAAIEIKMGQ-GAKPGIGGHLPGTKIVGDVSRTRMIPEGSDAISPA 279 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ ++ P+++K + +SG I G G Sbjct: 280 PHHDIYSIEDLRQLVFSVKEATEYKKPVIVKVAAVHNIAAIASGIARSGADIIVIDGFRG 339 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N + G +R+ D Sbjct: 340 GTGAAPTRIRD----------NVGIPIELALAAVDQRLRDEGIRNNVSLVVGGSIRSASD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K++ LGA +A+ L + S +V Sbjct: 390 VVKAVALGADACYVATAALLAMGCHLCRTCQTGKCNWGIATQRPELVKRLNPNEGSARLV 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + E M +G ++ L N ++R Sbjct: 450 NLMHAWNHEIKELMGGMGINSIEVLRGNRLMLRG 483 >gi|189485162|ref|YP_001956103.1| glutamate synthase large subunit GltB FMN-binding component [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287121|dbj|BAG13642.1| glutamate synthase large subunit GltB FMN-binding component [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 501 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 99/336 (29%), Gaps = 69/336 (20%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---QRVMFSDHN------A 104 +LS P++ S+M+ G+ +LA AA + + G R + A Sbjct: 164 ELSIPIMFSAMSYGSISRNAH--ESLARAATELGICYNTGEGGLNRDFYKYGKNTIVQVA 221 Query: 105 IKSFELRQYAPHTVLISNLGAVQLN--------YDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + + + + Q V + A ++ + P Sbjct: 222 SGRFGVHKEYLNAGAAIEIKIGQGAKPGIGGHLPGKKVGEDVSATRMIPVGSDAISPAPH 281 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 +I ++ P+ +K S+ +++G + G Sbjct: 282 HDIYSIEDLRQLIFSLKEVTAYKK----PVFVKIAAVHNSAAIASGIVRAGADAIVVDGF 337 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNG 270 G + + RD + GIP L+L NE I +G +RN Sbjct: 338 RGGTGAAPTRVRD----------NVGIPIELALAAIDQRLREEEIRNEVSLIIAGSIRNS 387 Query: 271 VDILKSIILGASLG--GLASPF----------------LKPAMDSSD------------A 300 D++K++ LGA G A+ A + Sbjct: 388 ADVVKAVALGADAVYIGSAAVIALGCHLCRSCSTGKCNWGIATQEPELVKRLNPDIMYKR 447 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V + E + +G + L N ++R Sbjct: 448 LVNLASAWNHEIQELLGGMGINAIDSLRGNRLMLRG 483 >gi|86748261|ref|YP_484757.1| ferredoxin-dependent glutamate synthase [Rhodopseudomonas palustris HaA2] gi|86571289|gb|ABD05846.1| ferredoxin-dependent glutamate synthase [Rhodopseudomonas palustris HaA2] Length = 441 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K +G D L +K+G I G G Sbjct: 201 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-IGASRPYYDTALAVKAGADVIVIDGMQG 259 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIPT ++ A E Q I SGG+RNG D Sbjct: 260 GTAATQEVFIEH----------VGIPTLAAIRPAVEALQELGMHRKVQLIVSGGIRNGAD 309 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 I K++ LGA + + L D+S ++ E+L Sbjct: 310 IAKALALGADAVAIGTAALIALGDNSPSLEKDYEAL 345 >gi|119873296|ref|YP_931303.1| glutamate synthase (NADPH) [Pyrobaculum islandicum DSM 4184] gi|119674704|gb|ABL88960.1| glutamate synthase (NADPH) GltB2 subunit [Pyrobaculum islandicum DSM 4184] Length = 685 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 102/293 (34%), Gaps = 38/293 (12%) Query: 23 KKFFDDWHL--IHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 K F D + + AL + +VD ++F G +L P+ I M+ G + N +A Sbjct: 54 KAVFKDLRISDLKEALAKADKLDVDIGIDFFGTRLKIPVYIGDMSFGA--LSGNPNIAIA 111 Query: 81 IAAEKTK--VAMAVGSQRVMFSDHN--AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ- 135 A + + G + + ++ R T+L + L AV + G + Sbjct: 112 KAVTEVGAVAGIGEGGLHPEIAKYRNIVVQWASARFGMDMTLLRAGL-AVNIKIGQGAKP 170 Query: 136 ------KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN---FADLSSKIALLSSAMDVPL 186 + V ++ + E + P + + DL+ ++ L P+ Sbjct: 171 GIGGHLPGKKVVDII---AQLRKIPVGSEALSPAPHHDIYSIEDLAQRVKALRDLTGKPV 227 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+K +S I G G + + RD GIP Sbjct: 228 LVKVAAVNKIHFVAVGVGRSTAEGIIIDGAGAGTGATPVVARDHL----------GIPID 277 Query: 247 LSLEMARPY------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 ++ + + ++ IA G L + +D+ K I +GA + + + L Sbjct: 278 YAVPVVDMWLRKDGTRDKLIMIAGGMLYSPMDLAKIIAMGADMANMGTAALMA 330 >gi|254459433|ref|ZP_05072852.1| glutamate synthase domain protein [Campylobacterales bacterium GD 1] gi|207083843|gb|EDZ61136.1| glutamate synthase domain protein [Campylobacterales bacterium GD 1] Length = 468 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 43/263 (16%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L PL +S M+ G +I L+ A+ + G + M + + +YA Sbjct: 180 LKIPLFVSDMSFGALSEEAKI--ALSKGAQLAGTGICSG-EGGMLPEEQEANTRYFYEYA 236 Query: 115 PHTV-----LISNLGAVQLNYDFGVQKA--------HQAVHVLGADGL-----FLHLNPL 156 L+ + A G + + G+ + Sbjct: 237 SAGFGYKEELLHKVQAFHFKGGQGAKTGTGGHLPGNKNIGKISEVRGIPEGEPAISPPTF 296 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 +++ +F + ++ ++ +P+ K + DI+ L + Y + GR Sbjct: 297 KDLTTVE---DFKKFADRVREITG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGR 350 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNG 270 GG + + E R+ S +PT +L AR Y ++ I +GGLR Sbjct: 351 GGGTGAAPEMFRNHIS----------VPTIPALARARKYLDKQGASGRVTLIITGGLRVP 400 Query: 271 VDILKSIILGASLGGLASPFLKP 293 +D +K++ LGA L++ ++ Sbjct: 401 IDFVKAMALGADGVALSNSAIQA 423 >gi|218710117|ref|YP_002417738.1| putative glutamate synthetase [Vibrio splendidus LGP32] gi|218323136|emb|CAV19313.1| putative glutamate synthetase [Vibrio splendidus LGP32] Length = 520 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 39/258 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL+ L +S M+ G+ ++ +LA AE + G + M + A S + Sbjct: 181 LKLNISLFVSDMSFGSLSEEAKV--SLATGAELAGTGICSG-EGGMLPEEQAANSRYFYE 237 Query: 113 YAP-----HTVLISNLGAVQLNYDFGVQ-----------KAHQAVHVLGADGLFLHLNPL 156 A + N+ A G + + V G + ++P Sbjct: 238 LASAQFGYDESKLINVQAFHFKGGQGAKTGTGGHLPGAKNIGKIAEVRGIEAGTAAISPP 297 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + +F ++++ ++ +P+ K + DI+ L + Y + GR Sbjct: 298 T-FVDLKTVEDFKKFANRVREVTG--GIPIGFKLSANHIE-EDIQFALDASADYIILDGR 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNG 270 GG + + E RD S +PT +L AR Y ++ I +GGLR Sbjct: 354 GGGTGAAPEMFRDHIS----------VPTIPALARARAYLDKQGVSDRVTLIITGGLRVP 403 Query: 271 VDILKSIILGASLGGLAS 288 +D +K++ LGA +++ Sbjct: 404 MDFVKAMALGADGVAISN 421 >gi|118471237|ref|YP_890482.1| glutamate synthase family protein [Mycobacterium smegmatis str. MC2 155] gi|118172524|gb|ABK73420.1| glutamate synthase family protein [Mycobacterium smegmatis str. MC2 155] Length = 446 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 37/191 (19%) Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G L + A + G D L + +N L+EI + + Sbjct: 189 GMRTLPQGIDQRSACRHPDWTGPDDLTIKINELREI--------------------TDWE 228 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K VG + D++L + SG + G G + + E + GI Sbjct: 229 KPIYVK-VGATRTYYDVKLAVHSGADVVVVDGMQGGTAATQEVFIEH----------VGI 277 Query: 244 PTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 PT ++ A E Q I SGG+RNG D+ K++ LGA + + L D+ Sbjct: 278 PTLAAIPQAVQALQELGVHRKVQLIVSGGIRNGADVAKALALGADAVAIGTAALIALGDN 337 Query: 298 SDAVVAAIESL 308 A E + Sbjct: 338 HPRYAAEYEKI 348 >gi|91774814|ref|YP_544570.1| glutamate synthase (NADPH) GltB2 subunit [Methylobacillus flagellatus KT] gi|91708801|gb|ABE48729.1| glutamate synthase (NADPH) GltB2 subunit [Methylobacillus flagellatus KT] Length = 444 Score = 73.0 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K VG D+ L +K+G + G G Sbjct: 203 RHPDWTGPDDLEIKIAELREITDWEKPIYVK-VGATRPYFDVALAVKAGADVVVLDGMQG 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 262 GTAATQEVFIEH----------VGIPILAAIRPAVQALQDMGMHRKVQLIVSGGIRNGAD 311 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + L Sbjct: 312 VAKALALGADAVAIGTAALIALGDNDPRLEEEYNKL 347 >gi|325680680|ref|ZP_08160218.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324107460|gb|EGC01738.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 501 Score = 73.0 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 112/345 (32%), Gaps = 85/345 (24%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +LS P++ S+M+ G+ +LA AA + + G + + F + Sbjct: 163 LELSMPVMFSAMSYGSISYNAH--ASLARAATELGICYNTG-------EGGLHEDFYI-- 211 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----GLFLHL--------------- 153 Y P+TV+ + + + +A AV + G+ HL Sbjct: 212 YGPNTVV--QVASGRFGVHKNYLEAAAAVEIKMGQGAKPGIGGHLPGAKIVGDVSRTRMI 269 Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAM------DVPLLLKEVGCGLSSMDIELGLKSG 207 + I P + + + + L ++ P+++K + +SG Sbjct: 270 PEGSDAISPAPHHDIYSIED-LRQLVYSLKEATEYKKPIIVKVAAVHNIAAIASGIARSG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQF 261 I G G + + RD + GIP L+L N Sbjct: 329 ADIIAIDGFRGGTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRNNVSL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 + G +R+ D++K++ LGA +A+ L Sbjct: 379 VVGGSVRSAADVVKAVALGADAVYVATAALLAMGCHLCRTCQSGKCNWGIATQRPDLVKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 S +V +++ R E M +G ++ L N ++R Sbjct: 439 LNPDIGSRRLVNLMDAWRHEIKELMGGMGINSIESLRGNRLMLRG 483 >gi|332299133|ref|YP_004441055.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Treponema brennaborense DSM 12168] gi|332182236|gb|AEE17924.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Treponema brennaborense DSM 12168] Length = 328 Score = 73.0 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 91/260 (35%), Gaps = 35/260 (13%) Query: 56 SFPLL-ISSMTGGNNKMIERINR----NLAIAAEKTKVAMAVGSQRVMFSD-HNAIKSFE 109 PL+ ++ +TGG + + R +L A + +A+++G Sbjct: 89 RMPLIRLAPITGGVENVGYQDERSFYFDLITAVSEAGIALSIGDGCPDEKILGGIAALRA 148 Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG--ADGLFLHLNPLQEIIQPNGNTN 167 +R++ P A + ++ + + G A+ + + ++ + N Sbjct: 149 VRRFYPER------RAAVFIKPYENKRIFERIEWAGSCAELIGVDIDSYNIVTMRNLVRL 202 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++++ + A+ VP +K + + D+EL + ++ GG IE+ Sbjct: 203 EKKNAAQLREIRRALRVPFAVKGI---FTEADVELVRELKPDVAVVSNHGGR----IETR 255 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 R ++G + C E GG+R+ DI + GA+ + Sbjct: 256 RG---STAAFLAEYG-------RALQANCGE--LWVDGGIRDKGDIETAARFGAAQVLVG 303 Query: 288 SPFLKPAMDSSDAVVAAIES 307 PF+ V I Sbjct: 304 RPFISALCRG--GVREVIRE 321 >gi|297538605|ref|YP_003674374.1| ferredoxin-dependent glutamate synthase [Methylotenera sp. 301] gi|297257952|gb|ADI29797.1| ferredoxin-dependent glutamate synthase [Methylotenera sp. 301] Length = 449 Score = 73.0 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 26/160 (16%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D+ L +K+G + G G Sbjct: 204 RHPDWTGPDDLEIKIAELREITDWEKPIYVK-IGATRPYFDVALAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA----------RPYCNEAQFIASGGLR 268 + + E + GIP ++ A R + Q I SGG+R Sbjct: 263 GTAATQEVFIEH----------VGIPILAAIRPAVKALQDLGVYRNGKDSVQLIVSGGIR 312 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 NG D+ K+I LGA + + L D+ + + L Sbjct: 313 NGADVAKAIALGADAVAIGTAALIALGDNDPHLEEEYQKL 352 >gi|300115444|ref|YP_003762019.1| ferredoxin-dependent glutamate synthase [Nitrosococcus watsonii C-113] gi|299541381|gb|ADJ29698.1| ferredoxin-dependent glutamate synthase [Nitrosococcus watsonii C-113] Length = 513 Score = 73.0 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 92/258 (35%), Gaps = 30/258 (11%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFEL 110 L PL +S M+ G + LA AE T +A G N+ FEL Sbjct: 179 LHLDLPLFVSDMSFGALSEEAK--TALARGAELAGTGIASGEGGMLPAEQQANSRYMFEL 236 Query: 111 R--QYAPHTVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNG 164 ++ L++ + A + V V + ++ + P+ Sbjct: 237 ASAKFGYSESLLTRIQAFHFKAGQAAKTGTGGHLPGVKVSEEIASVRGIPVGKDAVSPSI 296 Query: 165 NTNFA--DLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + A + +P+ K + DI+ L++ Y + GRGG + Sbjct: 297 FPDLKVPHDFKEFADYVREVSGGIPIGFKMSAQHIEK-DIDFALEASADYIILDGRGGGT 355 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDILK 275 + RD + +PT +L AR + + I +GGLR D +K Sbjct: 356 GAAPLLFRD----------NIAVPTIPALARARRHLQATGREDVTLIITGGLRTPDDFIK 405 Query: 276 SIILGASLGGLASPFLKP 293 ++ LGA +A+ ++ Sbjct: 406 ALCLGADGIAVANSAIQA 423 >gi|84687223|ref|ZP_01015104.1| Ferredoxin-dependent glutamate synthase [Maritimibacter alkaliphilus HTCC2654] gi|84664811|gb|EAQ11294.1| Ferredoxin-dependent glutamate synthase [Rhodobacterales bacterium HTCC2654] Length = 514 Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 107/296 (36%), Gaps = 40/296 (13%) Query: 25 FFDDWHLIHRAL---PEISFDEVDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERIN 76 +DD ++ L P + V + L+ PL ++ M+ G +I Sbjct: 142 LWDDIQILPAQLARKPLMDDAHVATETVIGPRAKKPLMLNIPLFVTDMSFGALSPEAKI- 200 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA--VQLNYDFGV 134 LA AE +A G + MF + A S +YA S A VQ + G Sbjct: 201 -ALAKGAEAAGTGIASG-EGGMFPEEQAENSRYFYEYASAGFGWSPEIAEMVQAFHFKGG 258 Query: 135 QKAHQ-------AVHVLGADGLFLHLNPLQEIIQPNG--NTNFADLSSKIALLSSAM--D 183 Q A A V L Q+ + P + + + K+A Sbjct: 259 QAAKTGTGGHLPASKVTDKIAQVRGLEKGQDAVSPATFPDLDTPEDFKKMADEVRERSGG 318 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+ K + DI+ L + Y + GRGG + + RD S + Sbjct: 319 IPIGFKLSANHIE-DDIDFALAASADYIILDGRGGGTGAAPLIFRDHIS----------V 367 Query: 244 PTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 PT +L AR + + E + +GGLR D +K++ LGA L + ++ Sbjct: 368 PTIPALARARAHLDRKAGREITLVVTGGLRVPEDFVKALALGADAVALGNSAIQSV 423 >gi|254455636|ref|ZP_05069065.1| glutamate synthase large subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082638|gb|EDZ60064.1| glutamate synthase large subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 469 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 84/253 (33%), Gaps = 32/253 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELR 111 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 108 ELDIPVYITGMSFGALSYEAK--TALARGATMAGSATCSGEGGMIPDERRYSEKWYYQCI 165 Query: 112 Q----YAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGN 165 Q + PH +++ V + V V L + P + Sbjct: 166 QSRYGFNPHHAQLADGIEVFIGQGQKVGMGGHLMGQKVTDQVAEMRSLPSGIDQRSPARH 225 Query: 166 TNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ K+ L VP+ LK +G D+ + K + G G++ Sbjct: 226 PDWLGPDDLALKVEELRQLTKNKVPIQLK-LGASKVYDDVRMAAKCDPDSIYLDGMEGST 284 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGVDIL 274 + I + GIP ++ AR ++ I +GG+R+G D+ Sbjct: 285 GAGP----------HIAAANTGIPGIAAIREARRAIDDVGKTGKVTLIYAGGVRDGADMA 334 Query: 275 KSIILGASLGGLA 287 K++ LGA + Sbjct: 335 KALALGADAIAIG 347 >gi|167041604|gb|ABZ06351.1| putative conserved region in glutamate synthase [uncultured marine microorganism HF4000_009A22] Length = 455 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 32/265 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELR 111 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 94 ELEIPVYITGMSFGALSYEAK--TALARGATMAGSATCSGEGGMIPDERRYSEKWFYQCI 151 Query: 112 Q----YAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGN 165 Q + PH +++ V + V V L + P + Sbjct: 152 QSRYGFNPHHAQLADGIEVFIGQGQKVGMGGHLMGQKVTDQVAEMRSLPSGIDQRSPARH 211 Query: 166 TNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ K+ L + VP+ LK +G DI + K + G G++ Sbjct: 212 PDWLGPDDLALKVQELRELTNNQVPIQLK-LGAAKVYDDIRMAAKCDPDSIYLDGMEGST 270 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVDIL 274 + I + GIP ++ AR + I +GG+R+G D+ Sbjct: 271 GAGP----------HIAAANTGIPGIAAIREARRGLDDVGKSGDITLIYAGGIRDGADLA 320 Query: 275 KSIILGASLGGLASPFLKPAMDSSD 299 K++ LGA + + + + + Sbjct: 321 KALALGADAVAIGTGAMIALNCNKE 345 >gi|164425724|ref|XP_955979.2| hypothetical protein NCU04539 [Neurospora crassa OR74A] gi|157071038|gb|EAA26743.2| hypothetical protein NCU04539 [Neurospora crassa OR74A] Length = 456 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 19/143 (13%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+K + S D + G ++ G D Sbjct: 311 FLIKGIQ---SVNDAKKAADLGFEGVVVSNHAGRQVDGAVGSLDAL-------------- 353 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAA 304 S+ A + G+R D++K++ LGA + A+ + V Sbjct: 354 -ESIVKAVGERRGFTVMFDSGVRGAADVMKALALGAKFVFIGRLWIWGLAIMGEEGVRHV 412 Query: 305 IESLRKEFIVSMFLLGTKRVQEL 327 + SL +F + M ++G + V E+ Sbjct: 413 LRSLLADFDILMNVMGVRSVDEI 435 >gi|170727347|ref|YP_001761373.1| ferredoxin-dependent glutamate synthase [Shewanella woodyi ATCC 51908] gi|169812694|gb|ACA87278.1| ferredoxin-dependent glutamate synthase [Shewanella woodyi ATCC 51908] Length = 516 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 37/257 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 KL PL +S M+ G + L+I AE + G + M + A S + Sbjct: 180 LKLKIPLFVSDMSFGALSEEAK--TALSIGAELAGTGICSG-EGGMLPEEQAANSRYFYE 236 Query: 113 YAPHTV-----LISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQP- 162 A L+ ++ A G + V G + Q I P Sbjct: 237 LASAQFGYKEELMHSIQAFHFKGGQGAKTGTGGHLPGVKNKGKISQVRGIPEGQSAISPP 296 Query: 163 -----NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 + +++F + ++ +S VP+ K + DI+ L + Y + GRG Sbjct: 297 TFANLSSSSDFKRFADRVREVSG--GVPIGFKLSANHIER-DIQFALDASADYIILDGRG 353 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 G + + E RD S +PT +L AR Y +E I +GGLR + Sbjct: 354 GGTGAAPEMFRDHIS----------VPTIPALARARRYLDEQGASGRVTLIVTGGLRVPM 403 Query: 272 DILKSIILGASLGGLAS 288 D +K++ LGA +++ Sbjct: 404 DFVKAMALGADGVAISN 420 >gi|330720853|gb|EGG99048.1| Glutamate synthase [NADPH] large chain [gamma proteobacterium IMCC2047] Length = 440 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K VG + D++L +K+G + G +G Sbjct: 199 RHPDWTGPDDLAVKITEIREITDWKVPIYIK-VGATRTYYDVKLAVKAGADVIVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT + +A E Q I SGG+ NG Sbjct: 258 GT-----------AATQDVFIEHVGIPTLACIPLAVKALQEMGMHRKVQLIVSGGITNGA 306 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K + LGA + + + D+ L Sbjct: 307 DVAKCMALGADAVAIGTAAMVALGDNHPKFEKGFNEL 343 >gi|297181337|gb|ADI17527.1| l-lactate dehydrogenase (fMn-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured alpha proteobacterium HF0130_06E21] Length = 403 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 35/181 (19%) Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG------ 218 N N + + L LL+K + L D +K G ++ G Sbjct: 241 NRNASLDWDYVTRLREMWPRTLLIKGI---LHPDDAVAAVKHGADGIFVSNHAGNVNDTA 297 Query: 219 -TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 T W + + + + + IA G+R G DILK + Sbjct: 298 ITPWDALPA------------------------IVEAVGGKTKIIADSGVRRGSDILKGL 333 Query: 278 ILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 LGA + L A++ L E +M ++G V + + + Sbjct: 334 ALGADAIAIGRATLYGVGAAGEAGARRALDILDAEIRRTMAVMGVTDVAAITRDHIRLPS 393 Query: 337 Q 337 + Sbjct: 394 E 394 >gi|313901186|ref|ZP_07834674.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] gi|312954144|gb|EFR35824.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] Length = 501 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 106/334 (31%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDHN 103 +LS PLL S+M+ G+ ++LA+AA + + G Sbjct: 163 LELSMPLLFSAMSYGSISYNAH--KSLALAATELGILYNTGEGGLHEDFYCYGEHTIVQV 220 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 A F + + +T + Q G+ ++G + + I P Sbjct: 221 ASGRFGVHEQFLNTGAAIEIKMGQ-GAKPGIGGHLPGTKIVGDVSRTRMIPEGSDAISPA 279 Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + L+ ++A P+++K + +SG I G G Sbjct: 280 PHHDIYSIEDLRQLVFSLKEATAYKKPIIVKVAAVHNIAAIASGIARSGADIIAIDGFRG 339 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVD 272 + + RD GIP L+L N + G +RN D Sbjct: 340 GTGAAPTRVRD----------SVGIPIELALAAVDQRLRDEGIRNNVSLVVGGSIRNAAD 389 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K+I LGA +A+ L S +V Sbjct: 390 VVKAIALGADACYIATAALLALGCHLCRTCQSGKCNWGIATQNPDLVKRLDPEIGSKRLV 449 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ + E M +G ++ L N ++R Sbjct: 450 NVMKAWQHEIKELMGGMGINSIEALRGNRLMLRG 483 >gi|296109546|ref|YP_003616495.1| Glutamate synthase (NADPH) [Methanocaldococcus infernus ME] gi|295434360|gb|ADG13531.1| Glutamate synthase (NADPH) [Methanocaldococcus infernus ME] Length = 506 Score = 72.2 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 100/345 (28%), Gaps = 70/345 (20%) Query: 46 PSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------Q 95 + KL P++I+ M+ G + + + A A ++ M G Sbjct: 160 LKTKIAPNLKLDTPIMIAHMSYGALSLNAHL--SFAKAVKECGTFMGTGEGGLPKALYPY 217 Query: 96 RVMFSDHNAIKSFELRQYA--PHTVLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLH 152 A F + + + +G + + V + + Sbjct: 218 ADHIITQVASGRFGVNEEYLMKGAAIEIKIGQGAKPGIGGHLPGEKVTVEISKTRMI--- 274 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSG 207 + I P + + + L+ S P+ +K + S Sbjct: 275 -PEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSD 333 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQF 261 I G G + + + RD GIP +++ NE Sbjct: 334 ADAVVIDGYKGGTGAAPKVFRDH----------VGIPIEMAIAAVDQRLREEGLRNEISI 383 Query: 262 IASGGLRNGVDILKSIILGASLG-------------------------GLA--SPFLKPA 294 IASGG+++ D+ K+I LGA G+A P L Sbjct: 384 IASGGIKSSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQKPELVKR 443 Query: 295 MD---SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +D + V I++ E + G ++ L N +R Sbjct: 444 LDPEVGARRVANLIKAWTHEIKELLGANGINAIESLRGNRDRLRG 488 >gi|332974908|gb|EGK11821.1| FMN-dependent alpha-hydroxy acid dehydrogenase:ferredoxin-dependent glutamate synthase [Desmospora sp. 8437] Length = 477 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 109/334 (32%), Gaps = 72/334 (21%) Query: 53 KKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 KL P+LIS M+ GG + ++ LA A A G ++ + K F + Sbjct: 106 LKLEIPILISGMSYGGALGLKAKLG--LARGASLAGTATNSGEAPLVPEERREAKYF-IG 162 Query: 112 QYAPHTVLISNLGAVQL-NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP-------- 162 QY + + QL + + + QA +G+ + + P Sbjct: 163 QYNRGGWMNDHKSLSQLDAIEIQLGQGAQAAAPMGSSSWQMDEPFRKRFGIPDGEDAPIH 222 Query: 163 ---NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG---- 215 G +D + L VP+ LK +I++ L+ GI Y + G Sbjct: 223 TRLEGVDRPSDFPPLVRSLRETYGVPVGLKTCAGHYLEREIDIALEGGIDYIVVDGAEAG 282 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLR 268 GG + I+ D G+PT +L R E IA+GGL Sbjct: 283 THGGPT---------------ILQDDVGLPTLFALGRTIRHLERRGVKREVSVIAAGGLT 327 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMD------------------------------SS 298 LK++ LGA + S L + + Sbjct: 328 TPGHFLKALALGADAVYIGSIALVGMLHTQFNLASPLEPPVQVLLYQGKFKEDFNVEQGA 387 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + ++S +E + + LG + ++ Sbjct: 388 EHLAKFLKSCVEEMKMVAYALGKSDLMQIDRRDL 421 >gi|111223223|ref|YP_714017.1| putative glycolate oxidase [Frankia alni ACN14a] gi|111150755|emb|CAJ62457.1| putative Glycolate oxidase [Frankia alni ACN14a] Length = 402 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 103/341 (30%), Gaps = 50/341 (14%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKM 71 ++ + N+ F W R + + LG + P+L + T G Sbjct: 76 AGQETTLRANRDAFGGWQFRPRVMSGHPV--PSTATTVLGLPMRLPVLTAPFGTDGFFDT 133 Query: 72 IERINRNLAIAAEKTKVAMAV---GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQL 128 + +A A + V G+ + A + + Q P + + ++ Sbjct: 134 DGHL--AVARANARCGTLSIVPEAGTHSIESVAQAAPAAARVAQLHPMGTEGNFVRMLER 191 Query: 129 NYDFGVQKAHQAVHVLGA-------------DGLFLHLN-------PLQEII-QPNGNTN 167 G V A D + N Q++ Q Sbjct: 192 IERAGYAAVCVTVDCPTAGWRERNLRNRFTVDLRMITGNYPPGGDVAAQDVFGQLFARDE 251 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 ++A L D+P + K + L++ D + +G ++ GG + Sbjct: 252 PVWTWDRLAGLMRHTDLPWIAKGI---LTAQDTRAAIDAGAAAVLVSNHGGRQLDGTPAA 308 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL- 286 D ++ A+ + G+R G D++K++ LGA + Sbjct: 309 LDQLPEV-----------------VAAADGRAEVLLDSGVRCGTDVVKALALGARAVVIG 351 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A V + L +E + + LLG V EL Sbjct: 352 RLAAAGLAAGGEAGVARVLTLLHEEMVTVLTLLGHGSVTEL 392 >gi|298290469|ref|YP_003692408.1| ferredoxin-dependent glutamate synthase [Starkeya novella DSM 506] gi|296926980|gb|ADH87789.1| ferredoxin-dependent glutamate synthase [Starkeya novella DSM 506] Length = 445 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 22/142 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +KSG + G G Sbjct: 203 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-VGAARPYYDTALAVKSGADVVVVDGMQG 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIPT ++ A + Q I SGG+RNG D Sbjct: 262 GTAATQEIFIEH----------VGIPTLAAVRQAVKALQDLGMHRKVQLIVSGGIRNGAD 311 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + K++ LGA + + L Sbjct: 312 VAKALALGADAVAIGTAALVAL 333 >gi|297180271|gb|ADI16490.1| IMP dehydrogenase/GMP reductase [uncultured bacterium HF4000_05M23] Length = 380 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 90/304 (29%), Gaps = 67/304 (22%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--------------TGGNN- 69 FDD + + I+ + D + F G KL P L S+M GG Sbjct: 13 GFDDVAIAPGDIT-INPEMADLTTNFDGIKLEVPFLASAMDAVVDPKFAIEMTKAGGLAV 71 Query: 70 ----------KMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFELRQYAPHT 117 + I +A A + A+ QR+ + + + + Sbjct: 72 MNMDGLHTRYEDTAPIYEEIAAAPREEATAIM---QRIYAEPQKPELVAT-RVEEIKRGG 127 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI-A 176 + Q ++ + + L I + Sbjct: 128 GTAAVSFVPQNAKRMAPLAVEAGADMIVVQATVVT-----------ARHSSKSLKGLIFS 176 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 L +DVP+L VG +S + ++ GI + G+ + E Sbjct: 177 DLIKDIDVPIL---VGNTVSYEVTKELMQQGIHGVLVGVGPGSVCTSRE----------- 222 Query: 237 VFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLAS 288 GIP + ++ I GG+R G D+ KS GA+ + S Sbjct: 223 -VLGIGIPQVSATVECAAARDDFFKETGKYIPIITDGGIRTGGDVCKSFAAGANAVMIGS 281 Query: 289 PFLK 292 PF K Sbjct: 282 PFAK 285 >gi|190895650|ref|YP_001985942.1| glutamate synthase protein, large subunit [Rhizobium etli CIAT 652] gi|190699595|gb|ACE93679.1| glutamate synthase protein, large subunit [Rhizobium etli CIAT 652] Length = 470 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPRWEEEYQKL 345 >gi|255019401|ref|ZP_05291509.1| Glutamate synthase [NADPH] large chain [Acidithiobacillus caldus ATCC 51756] gi|254971139|gb|EET28593.1| Glutamate synthase [NADPH] large chain [Acidithiobacillus caldus ATCC 51756] Length = 452 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 30/145 (20%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G + D++L + +G + G +G Sbjct: 202 RHPDWTGPDDLTIKIQELREITDWEKPIYVK-IGASRTYHDVKLAVHAGADVIVLDGMQG 260 Query: 218 GT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLR 268 GT IE GIPT +L A + Q + SGG+R Sbjct: 261 GTAATQQVFIEHV--------------GIPTLAALRQAVQALEDLGMKNTVQLVISGGIR 306 Query: 269 NGVDILKSIILGASLGGLASPFLKP 293 G D+ K++ +GA + L Sbjct: 307 TGADVAKALAMGADAVSIGQGVLMA 331 >gi|325265146|ref|ZP_08131872.1| glutamate synthase domain protein [Clostridium sp. D5] gi|324029550|gb|EGB90839.1| glutamate synthase domain protein [Clostridium sp. D5] Length = 468 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 108/298 (36%), Gaps = 44/298 (14%) Query: 25 FFDDW-----HLIHRALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIE 73 +DD L L E V+ GK L P+ IS M+ G Sbjct: 103 GWDDILLLGAQLNPPPLDE--HAPVNIKTVI-GKNAEKPMVLDGPVYISHMSFGALSRET 159 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF---ELRQYAPHTVL-ISNLGAVQLN 129 +I L+ + AM G ++ + A + + T + N A++L Sbjct: 160 KI--ALSKGSAMAGTAMCSGEGGILPEEMAAAHKYIFEYVPNKYSVTPENLMNADAIELK 217 Query: 130 YDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQP---NGNTNFADLSSKIALLSSAM 182 G + H + + + PL +++I P + DL +A L A Sbjct: 218 IGQGTKPGMGGHLPGGKVTPEIAAVRNKPLGKDVISPSKFEEINSKEDLKDLVAQLRLAS 277 Query: 183 DV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K + G D+E + + + I GRGG + + RD S Sbjct: 278 GGRPIGVK-IAAGRIEKDLEFCVFAEPDFITIDGRGGATGASPRLIRDATS--------- 327 Query: 242 GIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +PT +L A+ Y + + +GGLR D K+I +GA +AS L A Sbjct: 328 -VPTIYALYRAKKYLREVGADGISLVITGGLRVSSDFAKAIAMGADAVAVASAGLIAA 384 >gi|167041181|gb|ABZ05939.1| putative conserved region in glutamate synthase [uncultured marine microorganism HF4000_001L24] Length = 455 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 88/265 (33%), Gaps = 32/265 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELR 111 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 94 ELEIPVYITGMSFGALSYEAK--TALARGATMAGSATCSGEGGMIPDERRYSEKWFYQCI 151 Query: 112 Q----YAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGN 165 Q + PH +++ V + V V L + P + Sbjct: 152 QSRYGFNPHHAQLADGIEVFIGQGQKVGMGGHLMGQKVTDQVAEMRSLPSGIDQRSPARH 211 Query: 166 TNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ K+ L + +P+ LK +G DI + K + G G++ Sbjct: 212 PDWLGPDDLALKVQELRELTNNQIPIQLK-LGAAKVYDDIRMAAKCDPDSIYLDGMEGST 270 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVDIL 274 + I + GIP ++ AR + I +GG+R+G D+ Sbjct: 271 GAGP----------HIAAANTGIPGIAAIREARRGLDDVGKSGDITLIYAGGIRDGADLA 320 Query: 275 KSIILGASLGGLASPFLKPAMDSSD 299 K++ LGA + + + + + Sbjct: 321 KALALGADAVAIGTGAMIALNCNKE 345 >gi|167041152|gb|ABZ05911.1| putative conserved region in glutamate synthase [uncultured marine microorganism HF4000_001B09] Length = 455 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 32/265 (12%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELR 111 +L P+ I+ M+ G + LA A A G ++ ++ Sbjct: 94 ELEIPVYITGMSFGALSYEAK--TALARGATMAGSATCSGEGGMIPDERRYSEKWFYQCI 151 Query: 112 Q----YAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGADGLFLHLNPLQEIIQPNGN 165 Q + PH +++ V + V V L + P + Sbjct: 152 QSRYGFNPHHAQLADGIEVFIGQGQKVGMGGHLMGQKVSDQVAEMRSLPSGIDQRSPARH 211 Query: 166 TNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 ++ K+ L + VP+ LK +G DI + K + G G++ Sbjct: 212 PDWLGPDDLALKVQELRELTNNQVPIQLK-LGAAKVYDDIRMAAKCDPDSIYLDGMEGST 270 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVDIL 274 + I + GIP ++ AR + I +GG+R+G D+ Sbjct: 271 GAGP----------HIAAANTGIPGIAAIREARRGLDDVGKSGDITLIYAGGIRDGADLA 320 Query: 275 KSIILGASLGGLASPFLKPAMDSSD 299 K++ LGA + + + + + Sbjct: 321 KALALGADAVAIGTGAMIALNCNKE 345 >gi|325294718|ref|YP_004281232.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065166|gb|ADY73173.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 505 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 98/275 (35%), Gaps = 48/275 (17%) Query: 38 EISFDEVDPSVEFLGKKLSF--PLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMA 91 E D + + GK+L P++ S+M+ G+ IN NL AIAA++ Sbjct: 151 EFDEDGISIKTKI-GKQLELEIPVIFSAMSYGS------INLNLQKAMAIAAKEFGTFWN 203 Query: 92 VGSQRVMFSDHNAIKS---------FELRQYAPHTVLISNLGAVQ-LNYDFGVQKAHQAV 141 G + S S F + T + Q G + V Sbjct: 204 TGEGGLHKSLREFKDSTIVQVASGRFGVDLDYLETSAAIEIKIGQGAKPGIGGHLPGEKV 263 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLS 196 + A+ + + + I P + + DL I L A + P+ +K Sbjct: 264 NEGIAETRMIPV--GSDAISPAPHHDIYSIEDLRQLIYALKEATNYEKPVFVKIAAVHNV 321 Query: 197 SMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--- 252 + +G I G RGGT + ++ RD GIP L++ Sbjct: 322 AAIASGIAHAGADAIAIDGIRGGT-GATPKALRDH----------VGIPIELAIAAVDDR 370 Query: 253 ---RPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 NE IA+GG RN VD+LK+I LGA Sbjct: 371 LRKEGLRNEVSLIAAGGFRNAVDVLKAIALGADAV 405 >gi|254500319|ref|ZP_05112470.1| hypothetical protein SADFL11_355 [Labrenzia alexandrii DFL-11] gi|222436390|gb|EEE43069.1| hypothetical protein SADFL11_355 [Labrenzia alexandrii DFL-11] Length = 538 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 95/259 (36%), Gaps = 32/259 (12%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 L PL +S M+ G +I LA AE + G ++ + A + Sbjct: 206 LHLKIPLFVSDMSFGALSEPAKI--ALARGAELAGTGICSGEGGMLPEEQQACSRYFYEL 263 Query: 113 YAPH-TVLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNG 164 + L VQ + G Q A V G LN + I P Sbjct: 264 ASGRFGFDWEKLNKVQAFHFKGGQGAKTGTGGHLPGSKVQGKIAEVRGLNEGESAISPPR 323 Query: 165 NTNFADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 ++ + ++ + + +P+ K + DI+ L+ G+ Y + GRGG Sbjct: 324 FPDWT-VCEQVRDFADEVRSRTGGIPIGYKLSAQHIEK-DIDAALEIGVDYIILDGRGGG 381 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDIL 274 + + RD + +PT +L AR + N+ + +GGLR D + Sbjct: 382 TGAAPIIFRD----------NISVPTIPALARARRHLDKVGRNDVSLVITGGLRKPADFV 431 Query: 275 KSIILGASLGGLASPFLKP 293 K++ LGA +++ ++ Sbjct: 432 KAMALGADAIAVSNAAMQA 450 >gi|150378017|ref|YP_001314612.1| ferredoxin-dependent glutamate synthase [Sinorhizobium medicae WSM419] gi|150032564|gb|ABR64679.1| ferredoxin-dependent glutamate synthase [Sinorhizobium medicae WSM419] Length = 442 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQNVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPKWEEEYQKL 345 >gi|225019326|ref|ZP_03708518.1| hypothetical protein CLOSTMETH_03279 [Clostridium methylpentosum DSM 5476] gi|224947957|gb|EEG29166.1| hypothetical protein CLOSTMETH_03279 [Clostridium methylpentosum DSM 5476] Length = 475 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 39/281 (13%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD L+ LP V + GK L P+ +S M+ G + + + Sbjct: 111 SWDDILLLGAQLNPLPLSEHATVSTTTVI-GKHAKKPMVLENPVYVSHMSFGA--LSKEM 167 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLISNLGAVQLN 129 LA + K K AM G ++ + A + L PH + ++ +++ Sbjct: 168 KLALAKGSAKAKTAMCSGEGGILPEEMEASYKYIFEYVPNLYSVTPHNLRCADAIEIKIG 227 Query: 130 YDFGVQKAHQAV-HVLGADGLFLHLNPL-QEIIQP---NGNTNFADLSSKIALLSSAMDV 184 + + + P+ Q+II P + DL + + L + Sbjct: 228 QGTKPGMGGHLPGEKVTPEIAAVRGKPVGQDIISPSYFEDIRSKEDLKNLVTQLREQSEG 287 Query: 185 -PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K + D+E + + I GRGG + + + +D S I Sbjct: 288 RPIGIKIAAGHIEW-DLEFIAYARPDFITIDGRGGATGASPKMLKDASS----------I 336 Query: 244 PTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILG 280 PT +L A+ Y + + +GGLR D K++ +G Sbjct: 337 PTIFALHRAKKYLDAHGLNIDLVITGGLRVSSDFAKALAMG 377 >gi|325002580|ref|ZP_08123692.1| L-lactate dehydrogenase [Pseudonocardia sp. P1] Length = 417 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 25/167 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L L++K V S D + +G ++ GG R Sbjct: 253 MDDVAWLRETWPGKLVIKGVQ---SVADARRVVAAGADAVLLSNHGGRQLDRA------- 302 Query: 232 SDIGIVFQDWGIPTPLSLEM--ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 P P L + ++A+ + G+ +G D++ ++ LGA + Sbjct: 303 ------------PVPAELIEPVVQELGDDAEVLVDTGILHGGDVVAAVALGARAALVGRA 350 Query: 290 FLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +L M +A V +IE LR E +M LLG R+ +L A +R Sbjct: 351 YLYGLMAGGEAGVRRSIEILRAEVERTMQLLGVTRIDDLRPEHARLR 397 >gi|145221889|ref|YP_001132567.1| ferredoxin-dependent glutamate synthase [Mycobacterium gilvum PYR-GCK] gi|315446375|ref|YP_004079254.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. Spyr1] gi|145214375|gb|ABP43779.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium gilvum PYR-GCK] gi|315264678|gb|ADU01420.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. Spyr1] Length = 454 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 71/201 (35%), Gaps = 47/201 (23%) Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G L + A + G D L + +N L+EI + + Sbjct: 189 GMRTLPEGIDQRSACRHPDWTGPDDLTIKINELREI--------------------TDWE 228 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K VG + D++L + +G + G G + + E + GI Sbjct: 229 KPIYVK-VGATRTYYDVKLAVHAGADVVVVDGMQGGTAATQEVFIEH----------VGI 277 Query: 244 PTPLSLEMARPYC----------------NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 PT ++ A + Q I SGG+RNG D+ K++ LGA + Sbjct: 278 PTLAAIPQAVQALQELGVHRTGASGATGVDGVQLIVSGGIRNGADVAKALALGADAVAIG 337 Query: 288 SPFLKPAMDSSDAVVAAIESL 308 + L D+ + E L Sbjct: 338 TAALIALGDNHPRYASEYEKL 358 >gi|222106750|ref|YP_002547541.1| glutamate synthase large subunit [Agrobacterium vitis S4] gi|221737929|gb|ACM38825.1| glutamate synthase large subunit [Agrobacterium vitis S4] Length = 442 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITNWEKPIYIK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPKWEEEYQKL 345 >gi|89055612|ref|YP_511063.1| ferredoxin-dependent glutamate synthase [Jannaschia sp. CCS1] gi|88865161|gb|ABD56038.1| ferredoxin-dependent glutamate synthase [Jannaschia sp. CCS1] Length = 535 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 94/261 (36%), Gaps = 37/261 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L PL +S M+ G ++ LA AE + G + M + A S + Sbjct: 204 LRLEIPLFVSDMSYGALSEPAKV--ALAQGAEMAGTGICSG-EGGMLPEEQAANSRYFYE 260 Query: 113 YAPH--TVLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPN 163 A L VQ + G Q A V G L Q I P Sbjct: 261 LASGRFGFSWEKLARVQAFHFKGGQGAKTGTGGHLPGHKVTGKIAEVRGLEEGQSAISP- 319 Query: 164 GNTNFADLSS--KIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 F D + +I + + +P+ K + DI+ L+ G+ Y + GR Sbjct: 320 --PRFPDWTDPAQIKDFADEVRDRTGGIPIGYKLSAQHIEK-DIDAALEVGVDYIILDGR 376 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR----PYCNEAQFIASGGLRNGVD 272 GG + + RD + +PT +L AR + + +GGLR D Sbjct: 377 GGGTGAAPTLFRD----------NISVPTIPALARARRHLDKTQPDVSLVITGGLRTAPD 426 Query: 273 ILKSIILGASLGGLASPFLKP 293 +K++ +GA +++ ++ Sbjct: 427 FIKALAMGADAIAVSNSAMQA 447 >gi|301632102|ref|XP_002945130.1| PREDICTED: (S)-mandelate dehydrogenase-like [Xenopus (Silurana) tropicalis] Length = 332 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 50/158 (31%), Gaps = 23/158 (14%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L L++K + +++ D + G ++ GG Sbjct: 183 CWQDVEWLRGIWPGKLVIKGI---MNAQDAVRAISVGADGIVLSNHGGRQLDGA------ 233 Query: 231 ESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + T L E+ + GG R G DI+K++ LGA + Sbjct: 234 ------------LSTMDVLPEVVAEVQGRLAVMLDGGFRRGSDIVKAVALGADAVLIGRA 281 Query: 290 FLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A AIE LR E + LLG V + Sbjct: 282 TTYGLAAGGQAGAARAIEILRSEVDRVLGLLGCPDVSQ 319 >gi|13476087|ref|NP_107657.1| glutamate synthase large subunit [Mesorhizobium loti MAFF303099] gi|260469719|ref|ZP_05813879.1| ferredoxin-dependent glutamate synthase [Mesorhizobium opportunistum WSM2075] gi|319784828|ref|YP_004144304.1| ferredoxin-dependent glutamate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|14026847|dbj|BAB53443.1| glutamate synthase large subunit [Mesorhizobium loti MAFF303099] gi|259028502|gb|EEW29818.1| ferredoxin-dependent glutamate synthase [Mesorhizobium opportunistum WSM2075] gi|317170716|gb|ADV14254.1| ferredoxin-dependent glutamate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 442 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +K+G + G G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVVDGMQG 259 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + + G PT + A + Q I SGG+RNG D Sbjct: 260 GTAATQEVFIE----------NVGQPTLACIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 309 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LG + + L D+ A L Sbjct: 310 VAKALALGVDAVSIGTAALVALGDNDPRWEAEYNEL 345 >gi|304438322|ref|ZP_07398263.1| glutamate synthase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368688|gb|EFM22372.1| glutamate synthase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 501 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 111/344 (32%), Gaps = 65/344 (18%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHN 103 +D S +LS P++ ++M+ G ++LA+AA++ + G + + Sbjct: 154 IDTSNLAPQLELSMPVMFAAMSYGAISYNAH--KSLAMAAQQLGIYYNTGEGGLHEDFYA 211 Query: 104 AIKS---------FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 + F + + + + Q G+ +G + Sbjct: 212 YGDNTIVQVASGRFGVHERYLNAGAAIEVKMGQ-GAKPGIGGHLPGTKSIGDVSRTRMIP 270 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMD------VPLLLKEVGCGLSSMDIELGLKSGI 208 + I P + + + + L ++ VP+++K + +SG Sbjct: 271 EGSDAISPAPHHDIYSIED-LRQLVYSLKEATNYTVPIIVKVAAVHNIAAITSGIARSGA 329 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFI 262 I G G + + RD + GIP L+L N+ + Sbjct: 330 DIIAIDGFRGGTGAAPTRIRD----------NVGIPIELALAACDKRLREEGIRNDVSLV 379 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA---------------------------- 294 G +R+ D++K+I LGA +A+ L Sbjct: 380 VGGSIRSAADVIKAIALGADACYVATAALMALGCHLCRSCQIGRCNWGIATQDPALVKRL 439 Query: 295 --MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + S +V + + R E + +G ++ L N ++R Sbjct: 440 NPDEGSQRLVNLMTAWRHEIKEMLGGMGINSIEALRGNRLMLRG 483 >gi|298294018|ref|YP_003695957.1| (S)-mandelate dehydrogenase [Starkeya novella DSM 506] gi|296930529|gb|ADH91338.1| (S)-mandelate dehydrogenase [Starkeya novella DSM 506] Length = 396 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 22/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L++K V L D + G ++ GG + ++ Sbjct: 239 WRDFEHMRKIWPGNLVIKGV---LHPDDARQAAELGANGLYVSNHGGRQLDSAPAPLEV- 294 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 L R E I G R G D+L ++ +G + L L Sbjct: 295 -----------------LPAIRAAAPEQTIIMDSGFRRGTDMLMAMAMGVDICLLGRAAL 337 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 A + LR+E +++ +G + L Sbjct: 338 YSVAAFGRLGAQRLVSILRREIDLNLAQIGCPDIANL 374 >gi|15890753|ref|NP_356425.1| glutamate synthase large subunit [Agrobacterium tumefaciens str. C58] gi|15159030|gb|AAK89210.1| glutamate synthase large subunit [Agrobacterium tumefaciens str. C58] Length = 442 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYIK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVALGDNDPHWEEEYQKL 345 >gi|327191629|gb|EGE58640.1| glutamate synthase large subunit 2 protein [Rhizobium etli CNPAF512] Length = 442 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPRWEEEYQKL 345 >gi|317970449|ref|ZP_07971839.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. CB0205] Length = 387 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 109/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---- 66 +I R D+ L+ + D S G P++ S+M G Sbjct: 2 DIQLGRSRTVRRAYGIDEIALVPGGRT-VDPAVTDSSWTLGGITREIPIIASAMDGVVDV 60 Query: 67 ------------------GNNKMIERINRNLAIAA---EKTKVAMAVGSQRVMFSDHNAI 105 G + N L A ++ V + + Sbjct: 61 GMCVELAKQGALGVLNLEGVQCRYDDPNPALDRIASVGKEEFVPLMQELYSQPVREDLIR 120 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNG 164 K + + + + G FG +A+ GAD F+ + E I P G Sbjct: 121 K--RIAEIKERGGIAAVSGTPVAALKFG-----KAIAEAGADLFFVQATVVSTEHIGPEG 173 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + L VP+++ G ++ +++G + G + + Sbjct: 174 QESL-----DLEALCRDFGVPVII---GNCVTYDVALKLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP S+ ++ +A GG+ G DI K Sbjct: 224 ----------SRGVLGIGIPQATSVADCAAARDDYMKESGRYVPIVADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPF-----------------------------------LKPAMDSSDAV 301 I GA + SP L+ + ++ Sbjct: 274 IACGADAVMIGSPIARSAEAPGRGFHWGMATPSPVLPRGTRIKVGTTGSLEKILRGPASL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++L SM LG + ++E+ ++ Sbjct: 334 DDGTQNLLGCIKTSMGTLGARTLKEMQQVEVVV 366 >gi|158316435|ref|YP_001508943.1| L-lactate dehydrogenase (cytochrome) [Frankia sp. EAN1pec] gi|158111840|gb|ABW14037.1| L-lactate dehydrogenase (cytochrome) [Frankia sp. EAN1pec] Length = 418 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 91/270 (33%), Gaps = 32/270 (11%) Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV----QL 128 E I+R A AA + + V + + + + F L ++ L Q Sbjct: 164 EMIDR--AAAARYEAIVLTVDTAVFGRRERDVRRGFSLPPTIGPGTILDGLLHPGWTWQF 221 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 ++ ++ A +G + L + I + + + L S +++ Sbjct: 222 VRSEPIRFSNVAGRDVGDGASPVTL---SDYINTQFDPGLSWAD--LTWLRSVWAGRVVV 276 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 K + + D +L ++G+ ++ GG + L + + Sbjct: 277 KGIQ---TVADAKLAAEAGVDAIVLSNHGGRQLDGAPATLPLVAPVAD------------ 321 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIES 307 + I GG+R G DI+K++ GA+ +L + + V + Sbjct: 322 -----AVGGRTEIICDGGVRRGSDIVKAVAAGATAAMAGRAYLYALGAAGERGVDRLLAW 376 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + ++ LLG V +L + + + Sbjct: 377 FAADIHRTLALLGAAGVADLGRDHLDLPAE 406 >gi|114767312|ref|ZP_01446135.1| glutamate synthase family protein [Pelagibaca bermudensis HTCC2601] gi|114540565|gb|EAU43639.1| glutamate synthase family protein [Roseovarius sp. HTCC2601] Length = 434 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D+ L +K+G + G +G Sbjct: 193 RHPDWTGPDDLEIKILELREITNWEKPIYIK-VGGARPYYDVALSVKAGADVIVLDGMQG 251 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q + SGG+R G Sbjct: 252 GT-----------AATQDVFIEHVGQPTLACIRPAVKALQDLGMHRKVQLVVSGGIRTGA 300 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A + L Sbjct: 301 DVAKALALGADAVSIGTAALVALGDNDPKWEAEYQKL 337 >gi|218682223|ref|ZP_03529824.1| ferredoxin-dependent glutamate synthase [Rhizobium etli CIAT 894] Length = 442 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|254507924|ref|ZP_05120053.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus 16] gi|219549160|gb|EED26156.1| L-lactate dehydrogenase (cytochrome) [Vibrio parahaemolyticus 16] Length = 78 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMF 317 + G+R G+D+++ + LGA L ++ A V ++ KE V+M Sbjct: 1 MKIFVDSGIRTGLDVVRMLALGADCAMLGRSYIYALAAQGQAGVENLLDLYEKEMRVAMT 60 Query: 318 LLGTKRVQELYLNTAL 333 L G K +Q+L ++ + Sbjct: 61 LTGAKTIQDLNRDSLV 76 >gi|209546025|ref|YP_002277915.1| ferredoxin-dependent glutamate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538882|gb|ACI58815.1| ferredoxin-dependent glutamate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 442 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|149372997|ref|ZP_01891953.1| ferredoxin-dependent glutamate synthase [unidentified eubacterium SCB49] gi|149354357|gb|EDM42924.1| ferredoxin-dependent glutamate synthase [unidentified eubacterium SCB49] Length = 536 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 109/306 (35%), Gaps = 41/306 (13%) Query: 15 KDPGIDRNK-KFFDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMT 65 G+DRN ++D + L P + + V V K +L PL +S M+ Sbjct: 157 ASMGVDRNTLPKWNDIQFLPAQLATRPLLDEEAVASKVVIGPKAKKPLELDMPLFVSDMS 216 Query: 66 GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM-FSDHNAIKSFELRQYAPHTVLISNLG 124 G +I LA AE + G ++ N K F A L Sbjct: 217 FGALSREAKI--ALAKGAELAGTGICSGEGGILPSEQANNSKYFYELASAQFGFSWDKLD 274 Query: 125 AVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 VQ + G Q A V L + I P N NF + + Sbjct: 275 NVQAFHFKGGQGAKTGTGGHLPGSKVSKEIAEVRGLKEGETAISPAANPNFHSVED-FKI 333 Query: 178 LSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + +P+ K + DI+ L G+ Y + GRGG + S RD + Sbjct: 334 FADKVRERTGGIPIGFKIAASHIEK-DIQFALDVGVDYIILDGRGGGTGSAPTILRDHIN 392 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLA 287 +PT +L AR Y + + + +GGLR D K+++LGA ++ Sbjct: 393 ----------VPTIPALARARKYMDQVGATDVTLVITGGLRVAEDFAKAMMLGADAIAVS 442 Query: 288 SPFLKP 293 + L+ Sbjct: 443 NSALQA 448 >gi|241895400|ref|ZP_04782696.1| lactate oxidase [Weissella paramesenteroides ATCC 33313] gi|241871374|gb|EER75125.1| lactate oxidase [Weissella paramesenteroides ATCC 33313] Length = 308 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 89/289 (30%), Gaps = 62/289 (21%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + N FD ++ L I E + G +L PL+++ + Sbjct: 46 DEWTLRENTIAFDRVQILPHVLSNI--SEPETKTSIFGLQLDTPLVMAP------AAAQG 97 Query: 75 INRNLAIAAEKTKVAMAVGS-------------------------QRVMFSDHNAIKSFE 109 I AA +A A GS ++ S N + F Sbjct: 98 IAHIRGEAATAEGMA-ATGSLMTQSTYSSKLIADAAAAGHGAPQFFQLYLSQDNDLNKFL 156 Query: 110 LRQY----APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN-- 163 L + + V+ ++L A V H + + + + L + Sbjct: 157 LDKAKEAGSKAIVITTDLTAEGYREADIVNDFHFPLPMANLEDYQVGLGQSDAGVGHGKD 216 Query: 164 --GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 N S I + D+P+++K + + D L + +G + ++ GG Sbjct: 217 VFDNEAHQIGVSDIKRIIDYTDLPVIIKGIQ---TPEDALLAISAGAQGIWVSNHGGRQL 273 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 + + D+ GI T ++ I GG+R G Sbjct: 274 NGGPASFDVLK---------GIATA--------VNHQVPIIFDGGVRRG 305 >gi|312141278|ref|YP_004008614.1| ferredoxin-dependent glutamate synthase [Rhodococcus equi 103S] gi|311890617|emb|CBH49935.1| ferredoxin-dependent glutamate synthase [Rhodococcus equi 103S] Length = 441 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 27/160 (16%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG + D++L +K+G + G +G Sbjct: 199 RHPDWTGPDDLAIKIIELREITGWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE---------AQFIASGGLR 268 GT + + + GIPT ++ A E Q + SGG+R Sbjct: 258 GT-----------AATQDVFIEHVGIPTLAAIPQAAQALQELGVHRTPGGVQLVVSGGIR 306 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 +G D+ K++ LGA + + L D+ E+L Sbjct: 307 SGADVAKAMALGADAVAIGTAALIALGDNHPRFQQQYEAL 346 >gi|310829747|ref|YP_003962104.1| Glutamate synthase (NADPH) [Eubacterium limosum KIST612] gi|308741481|gb|ADO39141.1| Glutamate synthase (NADPH) [Eubacterium limosum KIST612] Length = 501 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 94/339 (27%), Gaps = 75/339 (22%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-------------------- 93 +L P++ S+M+ G+ ++LA AA + G Sbjct: 164 ELELPIMFSAMSYGSISENAH--KSLARAAAELGTCYNTGEGGLNRGLYPYGRNTIVQVA 221 Query: 94 SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 S R + + + + G + + ++ + Sbjct: 222 SGRFGVHEDYLMAGAAIEIKMGQG---AKPGIGGHLPGKKIGEKVSKTRMIPEGADAISP 278 Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 P +I + + P+++K + +SG I Sbjct: 279 APHHDIYSIEDLRQLIFSLKEATGYTK----PVIVKIAAVHNVAAIASGIARSGADIIAI 334 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ + G + Sbjct: 335 DGFRGGTGAAPTRIRD----------NVGIPIELALAAVDQRLRDEQIRNDISIVVGGSI 384 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA------------------------------MDS 297 R+ D++K+I LGA + + L Sbjct: 385 RSSADVVKAIALGADACYIGTAALLALGCHLCRHCQSGRCNWGIATQREDLVKRLNPEIG 444 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ + + + E M +G ++ L N ++R Sbjct: 445 AERLTNLMRAWNHEIQEMMGGMGINSIESLKGNRLMLRG 483 >gi|255576597|ref|XP_002529189.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223531367|gb|EEF33203.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 300 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 41/171 (23%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 N + + + L S D+P+L+K V L+ D ++ G+ ++ G Sbjct: 159 NKTLDASFCWKDVEWLKSITDLPILIKGV---LTGEDAVKAVEIGVSGIIVSNHGARQLD 215 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + T +LE + GG+R Sbjct: 216 YTPA------------------TISALEEVVHAIGGRVPVLLDGGIR------------P 245 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + GLA + V ++ L+ E ++M L ++++ + Sbjct: 246 VIYGLA-------VQGEHGVRQVMKMLKDELELTMALSACPSLKDITRSHV 289 >gi|318040294|ref|ZP_07972250.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. CB0101] Length = 387 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 108/390 (27%), Gaps = 91/390 (23%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---- 66 I R D+ L+ + D S G P++ S+M G Sbjct: 2 EIQLGRSRTVRRAYGIDEIALVPGGRT-VDPAVTDSSWTLGGVTREIPIIASAMDGVVDV 60 Query: 67 ------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 G + N L A V + ++S Sbjct: 61 GMCVELTKQGALGVLNLEGVQCRYDDPNPALDRIAA-VGKEEFVPLMQELYSQPVRED-- 117 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNGNTN 167 +R+ + AV ++ +A+ GAD F+ + E I P G + Sbjct: 118 LIRKRIAEIKERGGIAAVSATPVAALKFG-KAIAEAGADLFFVQATVVSTEHIGPEGQES 176 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + L VP+++ G ++ +++G + G + + Sbjct: 177 L-----DLEALCRDFGVPVII---GNCVTYEVALKLMRAGAAGVMVGIGPGAACT----- 223 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIIL 279 GIP S+ ++ +A GG+ G DI K + Sbjct: 224 -------SRGVLGIGIPQATSVADCAAARDDYMAESGRYVPIVADGGIVTGGDICKCLAC 276 Query: 280 GASLGGLASPFLKPA-----------------------------------MDSSDAVVAA 304 GA + SP + A + ++ Sbjct: 277 GADAVMIGSPIARAAEAPGRGFHWGMATPSPVLPRGTRIKVGTTGSLEKILRGPASLDDG 336 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++L SM LG + ++E+ ++ Sbjct: 337 TQNLLGCIRTSMGTLGARTLKEMQQVEVVV 366 >gi|126727819|ref|ZP_01743649.1| glutamate synthase family protein [Rhodobacterales bacterium HTCC2150] gi|126702946|gb|EBA02049.1| glutamate synthase family protein [Rhodobacterales bacterium HTCC2150] Length = 446 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 100/305 (32%), Gaps = 40/305 (13%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD----EVDPSVEFLGK------KLSFPLLISSMTGG 67 G R FDD + ++ + + D SV G +L P+ I+ M+ G Sbjct: 42 GAKRKVPSFDDLLFMGASISRYPLEGYREKCDTSVTIGGLNASNPIELDTPVTIAGMSFG 101 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL----RQYAPHTVLISNL 123 + +A T G H+ ++ P+ + ++ Sbjct: 102 ALSGPAKEALGRGASAAGTSTTTGDGGMTPEERGHSTKLVYQYLPSRYGMNPNDLRKADA 161 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFADLSSKIALL--- 178 + + + +D + N + I Q + ++ + Sbjct: 162 IEIVVGQGAKPGGGGMLLGQKISDRVAAMRNLPKGIDQRSACRHPDWTGPDDLEIKILEL 221 Query: 179 --SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIG 235 + VP+ +K V D+ L +K+G + G +GGT + Sbjct: 222 REITGWKVPIYVK-VAGARPYYDVTLAVKAGADAIVLDGMQGGT-----------AATQD 269 Query: 236 IVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASP 289 + + G PT + A + Q I SGG+R+G D+ K++ LGA + + Sbjct: 270 VFIEHVGQPTLAIIRPAVKALQDLGMHRKVQLILSGGIRSGADVAKAMALGADAVAIGTA 329 Query: 290 FLKPA 294 L Sbjct: 330 ALIAL 334 >gi|86360693|ref|YP_472581.1| glutamate synthase large subunit 2 protein [Rhizobium etli CFN 42] gi|86284795|gb|ABC93854.1| glutamate synthase large subunit 2 protein [Rhizobium etli CFN 42] Length = 442 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPRWEEEYQKL 345 >gi|222081889|ref|YP_002541254.1| glutamate synthase large subunit 2 protein [Agrobacterium radiobacter K84] gi|221726568|gb|ACM29657.1| glutamate synthase large subunit 2 protein [Agrobacterium radiobacter K84] Length = 442 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKIMELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVAIGDNDPRWEEEYQKL 345 >gi|297184356|gb|ADI20472.1| l-lactate dehydrogenase (fMn-dependent) and related alpha-hydroxy acid dehydrogenases [uncultured alpha proteobacterium EB080_L58F04] Length = 449 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 23/153 (15%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ L L++K + L+ D + + G+ ++ G + Sbjct: 308 LSWLRENWQGSLIVKGI---LNPDDTKRLERIGVDALWVSNHAGRQFD------------ 352 Query: 235 GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G P +S+ + I G+ +G+DIL+++ LGA L + Sbjct: 353 -------GAPESISMLPSIRRATTLPLIFDSGIESGLDILRALALGADFVMLGKAWHYAL 405 Query: 295 MD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 V + LRK+ I +M LG + +++ Sbjct: 406 GALGPLGPVHLTDILRKDLIANMGQLGLENLKD 438 >gi|325673888|ref|ZP_08153578.1| glutamate synthase beta subunit [Rhodococcus equi ATCC 33707] gi|325555153|gb|EGD24825.1| glutamate synthase beta subunit [Rhodococcus equi ATCC 33707] Length = 441 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 27/160 (16%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K VG + D++L +K+G + G +G Sbjct: 199 RHPDWTGPDDLAIKIIELREITGWEKPIYVK-VGATRTYYDVKLAVKAGADVIVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE---------AQFIASGGLR 268 GT + + + GIPT ++ A E Q + SGG+R Sbjct: 258 GT-----------AATQDVFIEHVGIPTLAAIPQAAQALQELGVHRTPGGVQLVVSGGIR 306 Query: 269 NGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 +G D+ K++ LGA + + L D+ E+L Sbjct: 307 SGADVAKAMALGADAVAIGTAALIALGDNHPRFQQQYEAL 346 >gi|327310192|ref|YP_004337089.1| ferredoxin-dependent glutamate synthase [Thermoproteus uzoniensis 768-20] gi|326946671|gb|AEA11777.1| ferredoxin-dependent glutamate synthase [Thermoproteus uzoniensis 768-20] Length = 450 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K + I + + G I G+ GGT + + +D G Sbjct: 291 RIWIKLGPFRDALDVIRIAAEEGADAVVIDGKEGGTGMAPTAAM-----------KDLGY 339 Query: 244 PTPL---SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSD 299 PT + ++ AR ++ + +G L +G ++KS+ LGAS +A PFL A+ Sbjct: 340 PTLVGLKAIRKAREEGHKISLLIAGRLYDGGHVVKSLALGASGTYMARPFLIAALARGEK 399 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQE 326 V +ESL+ E + + LG V + Sbjct: 400 GVENYLESLKVEVQMLVSALGKYDVAD 426 >gi|227821995|ref|YP_002825966.1| glutamate synthase large subunit-like protein [Sinorhizobium fredii NGR234] gi|227340995|gb|ACP25213.1| glutamate synthase large subunit-like protein [Sinorhizobium fredii NGR234] Length = 442 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|114769211|ref|ZP_01446837.1| putative glutamate synthetase [alpha proteobacterium HTCC2255] gi|114550128|gb|EAU53009.1| putative glutamate synthetase [alpha proteobacterium HTCC2255] Length = 514 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 97/263 (36%), Gaps = 38/263 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFEL 110 KL PL +S M+ G +I LA AE T + G + N+ +EL Sbjct: 181 LKLDIPLFVSDMSYGALSEEAKI--ALARGAELAGTGICSGEGGMLPEEQNENSKYFYEL 238 Query: 111 RQY----APHTVLISNLGAVQLNYDFGVQKA---HQAVHVLGADGLFL-HLNPLQEIIQP 162 P L+ + A G + H + + L Q+ I P Sbjct: 239 ASAQFGWNPE--LVEKVQAFHFKGGQGAKTGTGGHLPGEKVQGKIAQVRGLVEGQDAISP 296 Query: 163 ------NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 N T+F ++ ++ S +P+ K + DI+ L++ Y + GR Sbjct: 297 ASFIDLNTPTDFKRVADEVRERSG--GIPIGFKLSANHIE-DDIDFALEASADYIILDGR 353 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-----YCNEAQFIASGGLRNGV 271 GG + + RD S +PT +L AR N+ I +GGLR Sbjct: 354 GGGTGAAPLIFRDHIS----------VPTIPALARARKHLNNRVGNDVTLIITGGLRVAE 403 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D K++ LGA +++ ++ Sbjct: 404 DFSKAMALGADAIAVSNSAMQAV 426 >gi|302527638|ref|ZP_07279980.1| L-lactate oxidase [Streptomyces sp. AA4] gi|302436533|gb|EFL08349.1| L-lactate oxidase [Streptomyces sp. AA4] Length = 412 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 132/370 (35%), Gaps = 72/370 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 ++ + R ++ F++ L R L EVDP+ L + + PL+++ TG M Sbjct: 63 AEQEISLGRARRAFENVELHPRVLQ--DVTEVDPATSVLSGQSALPLVLAP-TGFTRMMH 119 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-MFSD-----HNAIKSFEL----RQYAPHTVL--I 120 +A AA + + + + D +A + F+L + A ++ Sbjct: 120 HEGEIAVARAAARAGIPYVLSTMGTTDLEDVRACAPSARQWFQLYLWKDRAASEALVERA 179 Query: 121 SNLG--AVQLNYDFGVQKAHQ-------------AVHVLGADGL-------FLHLNPLQE 158 + G A+ L D + A V L + L PLQ Sbjct: 180 AQAGYEALVLTVDTPIGGARMRDVRNGLTIPPTLTVRTLAGIAVRPSWWMNLLTTEPLQF 239 Query: 159 IIQPNGNTNFADL----------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 N + +L + + L L++K + S D + SG+ Sbjct: 240 AALNNFDGTVEELIGTMFDPSLTVADLRWLRGRWPGKLIVKGIQ---SVADAKEMAASGV 296 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE--MARPYCNEAQFIASGG 266 ++ GG R PTPL L + ++ + I G Sbjct: 297 DALVLSNHGGRQLDRA-------------------PTPLELLPRVVDAVGDDCEVILDTG 337 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D++ + LGAS + +L M V AI+ LR E++ ++ LLG +R Sbjct: 338 VRTGADLVAARALGASAAMVGRAYLYGLMAAGEQGVERAIDILRAEYVRTLRLLGVRRTD 397 Query: 326 ELYLNTALIR 335 E+ A +R Sbjct: 398 EITGEHASLR 407 >gi|70983751|ref|XP_747402.1| FMN dependent dehydrogenase [Aspergillus fumigatus Af293] gi|66845028|gb|EAL85364.1| FMN dependent dehydrogenase, putative [Aspergillus fumigatus Af293] Length = 390 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 30/169 (17%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I L + D P++LK + S D ++ G++ ++ GG Sbjct: 249 SHALEEIGFLQAHWDGPIVLKGIQ---SVADARRAVEVGVQGIVVSNHGGRQQDGAIRSL 305 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D+ +I + + + G ++ LGA + + Sbjct: 306 DVLPEI-----------------VDAVGDRLEVLFDSG---------ALALGAKMVLIGR 339 Query: 289 PFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P+ + V + S+ + +++ L G K V +LN +++R Sbjct: 340 PYAYGLPIAGEAGVSHVLRSILADLDLTLHLGGIKSVSPEHLNRSVLRR 388 >gi|213582081|ref|ZP_03363907.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 108 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRK 310 A + +A G+RNG+D+++ I LGA L +L A V ++ + K Sbjct: 6 ADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDLIEK 65 Query: 311 EFIVSMFLLGTKRVQELYLNTAL 333 E V+M L G K + E+ ++ + Sbjct: 66 EMKVAMTLTGAKSISEISGDSLV 88 >gi|327310182|ref|YP_004337079.1| glutamate synthase [Thermoproteus uzoniensis 768-20] gi|326946661|gb|AEA11767.1| Glutamate synthase (NADPH) [Thermoproteus uzoniensis 768-20] Length = 650 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 112/340 (32%), Gaps = 63/340 (18%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +VD V+F G +LS P+ + M+ G + N +A AA + V +G + Sbjct: 41 DVDVGVDFFGTRLSAPIYLGDMSFGA--LSGNPNIAIAKAATEEGVVAGIGEGGLHPEVA 98 Query: 103 N----AIKSFELRQYAPHTVLIS----NLGAVQ-LNYDFGVQKAHQAVHVLGADGLFLHL 153 ++ R +L + N+ Q G + V + A+ + Sbjct: 99 KYRNIVVQWASARFGMDMDLLRAGLAVNIKIGQGAKPGIGGHLPGRKVTKIIAELRKIPE 158 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + + P + + DL+ ++ L P+L+K +S Sbjct: 159 --GSDALSPAPHHDIYSIEDLAQRVKALRDLTGKPVLVKVAAVNKIMYVAVGVARSTAEG 216 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIAS 264 I G G + + S R+ GIP ++ + + + +A Sbjct: 217 IIIDGAGAGTGATPISVRNHL----------GIPVDYAVPVVDRWLKDNGVRDGFLVVAG 266 Query: 265 GGLRNGVDILKSIILGASLGGL------------------------------ASPFLKPA 294 G L + DI K I LGA + + A P L Sbjct: 267 GMLYSASDIAKLIALGADMANIGTAALLSFGCIMCHSCHTGGCPTSLTNMIGARPDLDIE 326 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 S+ A+ + +LR ++ LG ++EL L+ Sbjct: 327 WASA-ALRRYLSALRLGLKAILYSLGMDSLKELVGRRDLL 365 >gi|116255756|ref|YP_771589.1| putative glutamate synthase [NADPH] large chain precursor [Rhizobium leguminosarum bv. viciae 3841] gi|241666496|ref|YP_002984580.1| ferredoxin-dependent glutamate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115260404|emb|CAK03508.1| putative glutamate synthase like large chain precursor [Rhizobium leguminosarum bv. viciae 3841] gi|240861953|gb|ACS59618.1| ferredoxin-dependent glutamate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 442 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q I SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|171185293|ref|YP_001794212.1| glutamate synthase (NADPH) [Thermoproteus neutrophilus V24Sta] gi|170934505|gb|ACB39766.1| Glutamate synthase (NADPH) [Thermoproteus neutrophilus V24Sta] Length = 681 Score = 71.1 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 110/350 (31%), Gaps = 65/350 (18%) Query: 35 ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK--VAMAV 92 AL + +VD ++F G +L P+ + M+ G + N +A A + + Sbjct: 64 ALTKADKLDVDTGIDFFGTRLEIPIYVGDMSFGA--LSGNPNIAIAKAVTEVGAVAGIGE 121 Query: 93 GSQRVMFSDHN--AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ-------KAHQAVHV 143 G + + ++ R +L + L AV + G + + V + Sbjct: 122 GGLHPEIAKYRNIVVQWASARFGMDMALLRAGL-AVNIKIGQGAKPGIGGHLPGRKVVDI 180 Query: 144 LGADGLFLHLNPLQEIIQPNGNTN---FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + + E + P + + DL+ ++ L P+L+K Sbjct: 181 I---AQLRKIPVGSEALSPAPHHDIYSIEDLAQRVKALRDLTGKPVLVKVAAVNKIHFVA 237 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY----- 255 +S I G G + + RD GIP ++ + + Sbjct: 238 VGVGRSTAEGIIIDGAGAGTGATPIVARDHL----------GIPIDYAVPVVDMWLRRDG 287 Query: 256 -CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------------------- 293 IA G L + +D+ K + +GA + + + L Sbjct: 288 TRGGLIMIAGGMLYSPMDVAKIVAMGADMANMGTAALMAMGCILCHACHTGGCPTALTNM 347 Query: 294 --------AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S + + ++ K ++ LG ++EL L+ Sbjct: 348 IGSGKVLDVEWGSRLLANYLTAVGKGLKAILYALGMSSLRELVGRRDLLE 397 >gi|238608315|ref|XP_002397202.1| hypothetical protein MPER_02416 [Moniliophthora perniciosa FA553] gi|215471185|gb|EEB98132.1| hypothetical protein MPER_02416 [Moniliophthora perniciosa FA553] Length = 203 Score = 71.1 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 34/163 (20%) Query: 169 ADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 A KI L P L+K + S D + G + G Sbjct: 42 AHTWEKIPWLIKEWKRISDGRPFLIKGIQ---SVQDAVKAYEVGCEGIVVTNHAGRQVDG 98 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 ++ +I + N +R G D+ K+I LGA Sbjct: 99 AVGSLEMLPEI-----------------VKAVGNR--------IRTGSDVFKAIALGAHA 133 Query: 284 GGLAS-PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + A + ++SL + ++M + G ++ Sbjct: 134 VMIGRLYVWGMAHEGEKGCRHVLKSLLADLDITMTVAGYASIK 176 >gi|296132511|ref|YP_003639758.1| ferredoxin-dependent glutamate synthase [Thermincola sp. JR] gi|296031089|gb|ADG81857.1| ferredoxin-dependent glutamate synthase [Thermincola potens JR] Length = 484 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 99/291 (34%), Gaps = 60/291 (20%) Query: 44 VDPSVEFLGKK------LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV 97 VD V GK + P+++S M G A +EK KVA+A G+ Sbjct: 112 VDTKVVI-GKNCKYPLIIDLPIMVSGMAFG------------AALSEKAKVALAKGASMA 158 Query: 98 MFSDHNAIKSF--ELRQYAPHTVLISNLGAVQLNYD--FGVQKAHQAVHVLGADGLFLHL 153 + + F R+ A +L N G + D + G Sbjct: 159 NTATNTGEGPFLPSERKAAKKLILQYNRGNWNKSDDILKQADAIEIQIGQGATGGTGQKY 218 Query: 154 N---------------PLQEIIQPNGNTNFADLSSKIALLSSAM-----DVPLLLKEVGC 193 N P Q+ + + + S++ L + D+P+ +K Sbjct: 219 NVGITDFKLAKGFGVLPAQDAVLHARHAEVS-TPSELPKLVQKLKSVAGDIPIGVKFGAG 277 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL---- 249 MD++ + +G+ + I G E+ + I D+GIPT ++ Sbjct: 278 KYLEMDMKWAIDAGVDFITIDGA--------EAATKGSAPILQ--DDFGIPTIFAINRAA 327 Query: 250 --EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 + + IA+G +R D+LK + LGA + + L + Sbjct: 328 QFLQKQNCQDRISLIAAGKIRTPGDVLKVLALGADAAYIGAIALFAMSHTQ 378 >gi|332716563|ref|YP_004444029.1| glutamate synthase large subunit [Agrobacterium sp. H13-3] gi|325063248|gb|ADY66938.1| glutamate synthase large subunit [Agrobacterium sp. H13-3] Length = 442 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYIK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q + SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLVVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + L Sbjct: 309 DVAKALALGADAVAIGTAALVALGDNDPKWEDEYQKL 345 >gi|254453965|ref|ZP_05067402.1| glutamate synthase domain protein [Octadecabacter antarcticus 238] gi|198268371|gb|EDY92641.1| glutamate synthase domain protein [Octadecabacter antarcticus 238] Length = 396 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 105/294 (35%), Gaps = 38/294 (12%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 +DD ++ + P + V SV + +L PL +S M+ G +I Sbjct: 28 WDDIQILPAQMARKPLLDDVPVATSVTIGPRAAKPLQLDIPLFVSDMSYGALSEEAKIAL 87 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR--QYAPHTVLISNLGAVQLNYDFGVQ 135 + T + G N+ +EL ++ L++ + A G + Sbjct: 88 SRGAQMAGTGICSGEGGMLPEEQAENSRYFYELASARFGWDLDLVARVQAFHFKGGQGAK 147 Query: 136 KA----HQAVHVLGADGLFLHLNPLQEIIQP------NGNTNFADLSSKIALLSSAMDVP 185 V G L P Q I P +F ++ ++ S +P Sbjct: 148 TGTGGHLPGEKVQGKIAKVRGLEPGQPAISPSTFQDLETPADFKRIADEVRERSG--GIP 205 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + K + DI+ L++ Y + GRGG + + RD S +PT Sbjct: 206 IGFKLSANHIE-DDIDFALEASADYIILDGRGGGTGAAPLIFRDHIS----------VPT 254 Query: 246 PLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +L AR + + E + +GGLR D K++ LGA +++ ++ Sbjct: 255 IPALARARAHLDARTGREVTLVITGGLRVAEDFAKALALGADAVAVSNSAMQAV 308 >gi|71082849|ref|YP_265568.1| ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1062] gi|71061962|gb|AAZ20965.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1062] Length = 512 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 109/294 (37%), Gaps = 40/294 (13%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK------KLSFPLLISSMTGGNNKMIERIN 76 ++D ++ L P + D+V+ + +GK L P+ +S M+ G +I Sbjct: 138 WEDIQILTAQLAKKPLLDNDKVETDI-IIGKNSNKPLTLKIPIFVSDMSFGALSEEAKI- 195 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSD-HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 LA AE + G ++ + N K F A L +Q + G Q Sbjct: 196 -ALAKGAEGAGTGICSGEGGMLLEEQKNNSKYFYELASAKFGYSEDKLKNIQAFHFKGGQ 254 Query: 136 KAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS--KIALLSSAM--DV 184 A V G + ++ I P+ + + K + + + Sbjct: 255 AAKTGTGGHLPGNKVKGKISEVRQIPEGEDAISPSTFKDLTTVDDFLKFSNRVRELTGGI 314 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+ K + DIE + + Y + GRGG + + RD + +P Sbjct: 315 PIGFKLSAQHIE-DDIEFAVSASADYIILDGRGGGTGAAPLIFRD----------NISVP 363 Query: 245 TPLSLEMARPYCNE-----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 T +L AR Y ++ I +GGLR D +K++ LGA +++ ++ Sbjct: 364 TIPALARARNYLDKKGYDHVSLIVTGGLRTSADFVKALALGADGIAISNSAMQA 417 >gi|78356857|ref|YP_388306.1| glutamate synthase (NADPH) GltB2 subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219262|gb|ABB38611.1| glutamate synthase (NADPH) GltB2 subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 507 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 108/342 (31%), Gaps = 81/342 (23%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVG---------SQRVMFS 100 +L +PL+ ++M+ G+ IN NL A AA + + G Sbjct: 170 RLEYPLMFAAMSFGS------INFNLHKAMAQAATELGIVYNTGEGGLHPSLYGYGANTI 223 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNP 155 A F + + + + Q + +K + V L Sbjct: 224 VQVASGRFGVHKDYLNAGAAVEIKVGQGAKPGIGGHLPGEKIDEEVSRTRMVPL------ 277 Query: 156 LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I P + + + + L+ ++ VP+ +K + +++G Sbjct: 278 GSDAISPAPHHDIYSIEDLLQLIYAIKEATRYRVPVSVKIAAVHNAPAIASGIVRAGADI 337 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIAS 264 I G G + + RD + GIP L+L N A + S Sbjct: 338 VVIDGFRGGTGAAPTMIRD----------NVGIPIELALAAVDNRLRDEGIRNHASLVVS 387 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------MDSSDA-------- 300 GG+R D++K+I LGA + + L + +++A Sbjct: 388 GGMRCSADVVKAIALGADAVYIGTAALVAVGCTLCGRCYTGKCPWGIATNEARLKKRQNP 447 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + I + E + +G ++ L N +R Sbjct: 448 DVAARRLANLIRAWGHEIQEMLGGMGLNSIESLRGNRDKLRG 489 >gi|300088087|ref|YP_003758609.1| glutamate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527820|gb|ADJ26288.1| Glutamate synthase (NADPH) [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 501 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 97/283 (34%), Gaps = 43/283 (15%) Query: 40 SFDEVD-----PSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 E+D + + + KL P++ ++M+ G + + +LA AA + G Sbjct: 144 DMVEIDPGTGGLATKIAPQVKLEVPIMFAAMSYGAVSL--HVQESLARAATEVGTLWNTG 201 Query: 94 SQRVMFSDHNAIKS---------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQ 139 + S + F + + I + Q + +K Sbjct: 202 EGGLHPSLAKYGDNTIVQVASGRFGVYSDYLNAGRIVEIKIGQGAKPGIGGHLPGEKVSA 261 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSS 197 V + + + + Q + + DLS I L A + P+ +K + Sbjct: 262 EVSLTR--MIPRGTDAISPAPQHDI-YSIEDLSQLIYALKEATNYRRPISVKIAAVHNAP 318 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EM 251 +++G + G G + + + RD + GIP L+L Sbjct: 319 AIASGMVRAGADMIVLDGVRGATGAAPKVIRD----------NVGIPIELALAAVDTRLR 368 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 A N+A + SGG+R D+ K+I LGA + + L Sbjct: 369 AEGIRNQASLVISGGIRTSGDVAKAIALGADAVNIGTAALVAL 411 >gi|15897590|ref|NP_342195.1| glutamate synthase (NADPH) subunit alpha (gltB) [Sulfolobus solfataricus P2] gi|6015792|emb|CAB57619.1| glutamate synthase (NADPH) subunit alpha [Sulfolobus solfataricus P2] gi|13813851|gb|AAK40985.1| Glutamate synthase (NADPH) subunit alpha (gltB) [Sulfolobus solfataricus P2] gi|261602355|gb|ACX91958.1| Glutamate synthase (NADPH) [Sulfolobus solfataricus 98/2] Length = 747 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 107/384 (27%), Gaps = 65/384 (16%) Query: 6 KIDHINIVCKDPGIDRNKK-------FFDDWHLIHRALPEISF-DEVDPSVEFLGKKLSF 57 K++HI + + D IS + + +EF G + Sbjct: 56 KVEHIRYLSLTGKPYKIFNEDMNSLRVLDKVRFKLDKATSISLTPKANLELEFSGIYMKS 115 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL + M+ G + N +A AA+ T+ G + + F A Sbjct: 116 PLYLGDMSYGA--LSGNPNIAIATAADLTETLAGTGEGGLHPEVAKHKRIFVQWASARFG 173 Query: 118 VLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 V I L A Q A + V L + + I P + + Sbjct: 174 VDIRVLTAGMGVVIKIGQGAKPGIGGHLPGNKVTEPISLTRRIPIGIDAISPAPHHDIYS 233 Query: 171 LSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +I L A P+ +K + + G I G G + + Sbjct: 234 IEDLGQRIEALKEATGRPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGATPVVI 293 Query: 228 RDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 RD + GIP + + ++ IA+G + + D K LGA Sbjct: 294 RD----------NVGIPIELAIASADKILRREGLRDKFTIIAAGRVSSATDAAKLFALGA 343 Query: 282 SLGGLASPFLKPA-----------------------------MDSSDAVVAAIESLRKEF 312 + + + L +V I E Sbjct: 344 DIVSVGTGALIAMGCVMVHKCHVGSCPTGLTAKIDGTRVVDTEFGVKMLVNFINGFSLEL 403 Query: 313 IVSMFLLGTKRVQELYLNTALIRH 336 + LG ++EL L+ Sbjct: 404 ANILDNLGLNNIRELRGRRDLLYG 427 >gi|325969960|ref|YP_004246151.1| glutamate synthase (NADPH) [Spirochaeta sp. Buddy] gi|324025198|gb|ADY11957.1| Glutamate synthase (NADPH) [Spirochaeta sp. Buddy] Length = 501 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 97/337 (28%), Gaps = 69/337 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 K+ P++ S+M+ G+ ++LAIAA + G + ++ K Sbjct: 163 LKMDIPIMFSAMSYGSISYNAH--KSLAIAASELGTFYNTGEGGLHKDFYHYGKHTIVQV 220 Query: 108 ----FELRQYAPHTVLISNLGAVQLN--------YDFGVQKAHQAVHVLGADGLFLHLNP 155 F + + + Q + + A ++ + P Sbjct: 221 ASGRFGVHPDYLNAGAAIEIKMGQGAKPGIGGHLPGSKIGEDISATRMIPLYADAISPAP 280 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +I + + P+++K S +SG I G Sbjct: 281 HHDIYSIEDLRQLVYALKEATRYTK----PIIVKVAAVHNISAIASGIARSGADIIAIDG 336 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + RD + GIP L+L + G +R+ Sbjct: 337 FRGGTGAAPLRIRD----------NVGIPIELALASVDQRLRQEGIRGNVSLVVGGSIRS 386 Query: 270 GVDILKSIILGASLGGLASPFLKPA------------------------------MDSSD 299 D++K+I LGA +A+ L S Sbjct: 387 SSDVIKAIALGADAVYIATSALVALGCHLCRTCHSGKCNWGIATQNPELVKRLNPDVGSQ 446 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V I + E M +G ++ L N ++R Sbjct: 447 HLVNLITAWNHEIKEMMGGMGINSIEALRGNRLMLRG 483 >gi|307594491|ref|YP_003900808.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta distributa DSM 14429] gi|307549692|gb|ADN49757.1| ferredoxin-dependent glutamate synthase [Vulcanisaeta distributa DSM 14429] Length = 460 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 17/154 (11%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K I + + G I G+ GGT + + +D G Sbjct: 297 RIWIKLGPYRDVDRVISIAHEEGAHAVVIDGKEGGTGMA-----------PSVAMKDLGY 345 Query: 244 PTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSS 298 PT ++L+ + + +G L NG ++K++ LGAS +A PFL AM Sbjct: 346 PTIVALKKIHDARKLGIMDTSLLLAGRLYNGSHVVKAVALGASGAYMARPFLIAAMVKGE 405 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 V+ IE++++E + + LG ++E+ Sbjct: 406 KGVLNYIEAVKEEMQMLVSALGKYDIREVNTEDV 439 Score = 44.5 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +V+ G K+S P+++ SM G+ + + + +A AA K + M +G + Sbjct: 105 DVNLEGSLGGFKVSMPIVVGSM--GSTSIASKFSLEIARAAAKAGIVMGIGENVATVRGY 162 Query: 103 NAIKS 107 + + Sbjct: 163 SRRYT 167 >gi|227830433|ref|YP_002832213.1| Glutamate synthase (NADPH) [Sulfolobus islandicus L.S.2.15] gi|229579245|ref|YP_002837643.1| Glutamate synthase (NADPH) [Sulfolobus islandicus Y.G.57.14] gi|229584995|ref|YP_002843497.1| Glutamate synthase (NADPH) [Sulfolobus islandicus M.16.27] gi|227456881|gb|ACP35568.1| Glutamate synthase (NADPH) [Sulfolobus islandicus L.S.2.15] gi|228009959|gb|ACP45721.1| Glutamate synthase (NADPH) [Sulfolobus islandicus Y.G.57.14] gi|228020045|gb|ACP55452.1| Glutamate synthase (NADPH) [Sulfolobus islandicus M.16.27] Length = 714 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 112/390 (28%), Gaps = 77/390 (19%) Query: 6 KIDHINIVCKDPGIDRNKK-------FFDDWHLIHRALPEISF-DEVDPSVEFLGKKLSF 57 K++HI + + D IS + + ++F G + Sbjct: 23 KVEHIRYLSLTGKPYKIFNEDMNSLRVLDKVRFKLDKATSISLTPKANLELKFSGIYMKS 82 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--------- 108 PL + M+ G + N +A AA+ T+ G + + F Sbjct: 83 PLYLGDMSYGA--LSGNPNIAIATAADLTETLAGTGEGGLHPEVAKHKRIFVQWASARFG 140 Query: 109 -ELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 ++R ++ +G + K + + V + + + I P Sbjct: 141 VDIRVLTAGMGVVIKIGQGAKPGIGGHLPGNKVTEPISVTRRIPIGI------DAISPAP 194 Query: 165 NTNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +I L A P+ +K + + G I G G + Sbjct: 195 HHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTG 254 Query: 222 SRIESHRDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 + RD + GIP + ++ ++ IA+G + + D K Sbjct: 255 ATPVVIRD----------NVGIPIELAVASADNILRREGLRDKFTIIAAGRVSSATDAAK 304 Query: 276 SIILGASLGGLASPFLKP-----------------------------AMDSSDAVVAAIE 306 I LGA + + + L +V I Sbjct: 305 LIALGADVVSVGTGALIAMGCVMVHKCHVGSCPTGLTAKIDGTRVVDVEFGVKMLVNFIN 364 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 E + LG ++EL L+ Sbjct: 365 GFSMELANILDNLGLNSIKELRGKRELLYG 394 >gi|86138082|ref|ZP_01056657.1| glutamate synthase family protein [Roseobacter sp. MED193] gi|85825109|gb|EAQ45309.1| glutamate synthase family protein [Roseobacter sp. MED193] Length = 441 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D L +K+G + G +G Sbjct: 200 RHPDWTGPDDLEIKILELREITNWEKPIYVK-IGGARPYYDTALAVKAGADVVVLDGMQG 258 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q + SGG+R G Sbjct: 259 GT-----------AATQDVFIEHVGQPTLACIRPAVQALQDLGMHREVQLVVSGGIRTGA 307 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A + L Sbjct: 308 DVAKALALGADAVSIGTAALVALGDNDPKWEAEYQKL 344 >gi|238498008|ref|XP_002380239.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] gi|220693513|gb|EED49858.1| cytochrome B2, putative [Aspergillus flavus NRRL3357] Length = 150 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%) Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR 323 GG+ G DI+K+I LGA GL PFL AI L+ E +M +LG Sbjct: 62 DGGITRGADIVKAIALGARAVGLGRPFLYGVAFGEAGASKAIRILKDEIETTMAVLGLTS 121 Query: 324 VQEL 327 + L Sbjct: 122 LDGL 125 >gi|323474792|gb|ADX85398.1| glutamate synthase [Sulfolobus islandicus REY15A] gi|323477533|gb|ADX82771.1| glutamate synthase (NADPH) [Sulfolobus islandicus HVE10/4] Length = 714 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 112/390 (28%), Gaps = 77/390 (19%) Query: 6 KIDHINIVCKDPGIDRNKK-------FFDDWHLIHRALPEISF-DEVDPSVEFLGKKLSF 57 K++HI + + D IS + + ++F G + Sbjct: 23 KVEHIRYLSLTGKPYKIFNEDMNSLRVLDKVRFKLDKATSISLIPKANLELKFSGIYMKS 82 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--------- 108 PL + M+ G + N +A AA+ T+ G + + F Sbjct: 83 PLYLGDMSYGA--LSGNPNIAIATAADLTETLAGTGEGGLHPEVAKHKRIFVQWASARFG 140 Query: 109 -ELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 ++R ++ +G + K + + V + + + I P Sbjct: 141 VDIRVLTAGMGVVIKIGQGAKPGIGGHLPGNKVTEPISVTRRIPIGI------DAISPAP 194 Query: 165 NTNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +I L A P+ +K + + G I G G + Sbjct: 195 HHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTG 254 Query: 222 SRIESHRDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 + RD + GIP + ++ ++ IA+G + + D K Sbjct: 255 ATPVVIRD----------NVGIPIELAVASADNILRREGLRDKFTIIAAGRVSSATDAAK 304 Query: 276 SIILGASLGGLASPFLKP-----------------------------AMDSSDAVVAAIE 306 I LGA + + + L +V I Sbjct: 305 LIALGADVVSVGTGALIAMGCVMVHKCHVGSCPTGLTAKIDGTRVVDVEFGVKMLVNFIN 364 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 E + LG ++EL L+ Sbjct: 365 GFSMELANILDNLGLNSIKELRGKRELLYG 394 >gi|284174913|ref|ZP_06388882.1| glutamate synthase (NADPH) subunit alpha (gltB) [Sulfolobus solfataricus 98/2] Length = 714 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 107/384 (27%), Gaps = 65/384 (16%) Query: 6 KIDHINIVCKDPGIDRNKK-------FFDDWHLIHRALPEISF-DEVDPSVEFLGKKLSF 57 K++HI + + D IS + + +EF G + Sbjct: 23 KVEHIRYLSLTGKPYKIFNEDMNSLRVLDKVRFKLDKATSISLTPKANLELEFSGIYMKS 82 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL + M+ G + N +A AA+ T+ G + + F A Sbjct: 83 PLYLGDMSYGA--LSGNPNIAIATAADLTETLAGTGEGGLHPEVAKHKRIFVQWASARFG 140 Query: 118 VLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 V I L A Q A + V L + + I P + + Sbjct: 141 VDIRVLTAGMGVVIKIGQGAKPGIGGHLPGNKVTEPISLTRRIPIGIDAISPAPHHDIYS 200 Query: 171 LSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +I L A P+ +K + + G I G G + + Sbjct: 201 IEDLGQRIEALKEATGRPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGATPVVI 260 Query: 228 RDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 RD + GIP + + ++ IA+G + + D K LGA Sbjct: 261 RD----------NVGIPIELAIASADKILRREGLRDKFTIIAAGRVSSATDAAKLFALGA 310 Query: 282 SLGGLASPFLKPA-----------------------------MDSSDAVVAAIESLRKEF 312 + + + L +V I E Sbjct: 311 DIVSVGTGALIAMGCVMVHKCHVGSCPTGLTAKIDGTRVVDTEFGVKMLVNFINGFSLEL 370 Query: 313 IVSMFLLGTKRVQELYLNTALIRH 336 + LG ++EL L+ Sbjct: 371 ANILDNLGLNNIRELRGRRDLLYG 394 >gi|330809029|ref|YP_004353491.1| glutamate synthase, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377137|gb|AEA68487.1| putative glutamate synthase, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 446 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|254462072|ref|ZP_05075488.1| glutamate synthase domain protein [Rhodobacterales bacterium HTCC2083] gi|206678661|gb|EDZ43148.1| glutamate synthase domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 510 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 44/297 (14%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 +DD ++ + P + V SV + +L PL +S M+ G + Sbjct: 142 WDDIQVLPAQMARKPLLDDVPVATSVTIGPRAAKPLRLDIPLFVSDMSYGALSEEAK--T 199 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDF 132 L+ A+ + G + M + A S + A L++ + A Sbjct: 200 ALSRGAQMAGTGICSG-EGGMLPEEQAENSRYFYELASARFGWDLDLVARVQAFHFKGGQ 258 Query: 133 GVQKA---HQAVHVLGADGLFL-HLNPLQEIIQP------NGNTNFADLSSKIALLSSAM 182 G + H + + L P Q+ I P +F ++ ++ S Sbjct: 259 GAKTGTGGHLPGDKVQGKIAQVRGLEPGQDAISPSTFADLETPADFKRIADQVRERSG-- 316 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+ K + DI+ L + Y + GRGG + + RD S Sbjct: 317 GIPIGFKLSANHIE-DDIDFALAASADYIILDGRGGGTGAAPLIFRDHIS---------- 365 Query: 243 IPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +PT +L AR + + + + +GGLR D K++ LGA L++ ++ Sbjct: 366 VPTIPALARARRHLDAKSGRDVTLVITGGLRMAEDFAKAMALGADAIALSNSAMQAV 422 >gi|56696458|ref|YP_166815.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3] gi|56678195|gb|AAV94861.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3] Length = 450 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + +A + P+ +K VG D L +K+G + G +G Sbjct: 207 RHPDWTGPDDLEIKILELREITAWEKPIYVK-VGGTRPYYDTALAVKAGADVVVLDGMQG 265 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A + Q I SGG+R G Sbjct: 266 GT-----------AATQDVFIEHVGLPTLACIRPAVQALQDLGVHREVQLIVSGGIRTGA 314 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A + L Sbjct: 315 DVAKAMALGADAVAIGTAALIALGDNDPKWEAEYQKL 351 >gi|15963842|ref|NP_384195.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|307309543|ref|ZP_07589198.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] gi|307320375|ref|ZP_07599792.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti AK83] gi|7531131|sp|O87392|GLXD_RHIME RecName: Full=Glutamate synthase large subunit-like protein gi|15073017|emb|CAC41476.1| Glutamate synthase family protein [Sinorhizobium meliloti 1021] gi|306893941|gb|EFN24710.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti AK83] gi|306900003|gb|EFN30624.1| ferredoxin-dependent glutamate synthase [Sinorhizobium meliloti BL225C] Length = 442 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q + SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLVVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|227827724|ref|YP_002829504.1| glutamate synthase (NADPH) [Sulfolobus islandicus M.14.25] gi|229581994|ref|YP_002840393.1| Glutamate synthase (NADPH) [Sulfolobus islandicus Y.N.15.51] gi|238619896|ref|YP_002914722.1| Glutamate synthase (NADPH) [Sulfolobus islandicus M.16.4] gi|284997927|ref|YP_003419694.1| Glutamate synthase (NADPH) [Sulfolobus islandicus L.D.8.5] gi|227459520|gb|ACP38206.1| Glutamate synthase (NADPH) [Sulfolobus islandicus M.14.25] gi|228012710|gb|ACP48471.1| Glutamate synthase (NADPH) [Sulfolobus islandicus Y.N.15.51] gi|238380966|gb|ACR42054.1| Glutamate synthase (NADPH) [Sulfolobus islandicus M.16.4] gi|284445822|gb|ADB87324.1| Glutamate synthase (NADPH) [Sulfolobus islandicus L.D.8.5] Length = 705 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 109/384 (28%), Gaps = 65/384 (16%) Query: 6 KIDHINIVCKDPGIDRNKK-------FFDDWHLIHRALPEISF-DEVDPSVEFLGKKLSF 57 K++HI + + D IS + + ++F G + Sbjct: 14 KVEHIRYLSLTGKPYKIFNEDMNSLRVLDKVRFKLDKATSISLTPKANLELKFSGIYMKS 73 Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 PL + M+ G + N +A AA+ T+ G + + F A Sbjct: 74 PLYLGDMSYGA--LSGNPNIAIATAADLTETLAGTGEGGLHPEVAKHKRIFVQWASARFG 131 Query: 118 VLISNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 V I L A Q A + V + + + I P + + Sbjct: 132 VDIRVLTAGMGVVIKIGQGAKPGIGGHLPGNKVTEPISVTRRIPIGIDAISPAPHHDIYS 191 Query: 171 LSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 + +I L A P+ +K + + G I G G + + Sbjct: 192 IEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGATPVVI 251 Query: 228 RDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 RD + GIP + ++ ++ IA+G + + D K I LGA Sbjct: 252 RD----------NVGIPIELAVASADNILRREGLRDKFTIIAAGRVSSATDAAKLIALGA 301 Query: 282 SLGGLASPFLKP-----------------------------AMDSSDAVVAAIESLRKEF 312 + + + L +V I E Sbjct: 302 DVVSVGTGALIAMGCVMVHKCHVGSCPTGLTAKIDGTRVVDVEFGVKMLVNFINGFSMEL 361 Query: 313 IVSMFLLGTKRVQELYLNTALIRH 336 + LG ++EL L+ Sbjct: 362 ANILDNLGLNSIKELRGKRELLYG 385 >gi|114706141|ref|ZP_01439044.1| glutamate synthase large subunit [Fulvimarina pelagi HTCC2506] gi|114538987|gb|EAU42108.1| glutamate synthase large subunit [Fulvimarina pelagi HTCC2506] Length = 442 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 101/325 (31%), Gaps = 52/325 (16%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD--------EVDPSVEFLGK--KLSFPLLISSMTGG 67 G R FDD + ++ + VD + K +L P+ I+ M+ G Sbjct: 39 GAKRKLPHFDDLLFLGASMSRYPLEGYRERCDTSVDLGTRYAKKPIRLKIPITIAGMSFG 98 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + L A + G + + ++ + + Sbjct: 99 ALSGNAK--EALGRGASAAGTSTTTGDGGMTDEERGHSETL----VYQYLPSRYGMNPTD 152 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----PNG--------NTNFADLSSKI 175 L ++ G G+ L + Q P G + ++ Sbjct: 153 LRRADAIEIVVGQGAKPGGGGMLLGQKISDRVAQMRTLPKGIDQRSACRHPDWTGPDDLE 212 Query: 176 ALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRD 229 + + + P+ +K VG D L +K+G + G +GGT Sbjct: 213 IKILEIREITDWEKPIYIK-VGGARPYYDTALAVKAGADVVVLDGMQGGT---------- 261 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASL 283 + + ++ G PT + A + Q I SGG+R+G D+ K++ LGA Sbjct: 262 -AATQDVFIENVGQPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGADVAKAMALGADA 320 Query: 284 GGLASPFLKPAMDSSDAVVAAIESL 308 + S + D+ L Sbjct: 321 VSIGSAAMVALGDNDPQYEEEYNRL 345 >gi|302131460|ref|ZP_07257450.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 446 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|156393404|ref|XP_001636318.1| predicted protein [Nematostella vectensis] gi|156223420|gb|EDO44255.1| predicted protein [Nematostella vectensis] Length = 254 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 81/227 (35%), Gaps = 18/227 (7%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-GGNNKM 71 + I+ NK+ F L R L I +VD LG+ +S P+ I+ + Sbjct: 31 ADEARTIEENKEGFRRIKLRPRMLRGI--SDVDMRTTILGQPISMPICIAPTAVHRHAHP 88 Query: 72 IERINRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFEL-----RQYAPHTVLISN 122 I A A T +A+ + + + V ++ A+K F + R+ V + Sbjct: 89 DGEIATVKAAGAADTCMALTIWTTTTLEEVAAAEPQALKWFLIYHLKEREQLTSLVRRAE 148 Query: 123 ---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 A+ L D L Q + + + + + L Sbjct: 149 KAGYKALVLVADAPDGGIPYHRSSKRNGRLLTKGKGPQLVHMEHCQIDPSVSWESVYWLK 208 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 S +P++LK + L+ D L ++ G+ ++ GG +++ Sbjct: 209 SFTKLPIVLKGI---LTPEDARLAVEHGVDGIIVSNHGGRQLDGVQA 252 >gi|330966971|gb|EGH67231.1| glutamate synthase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 446 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|330876279|gb|EGH10428.1| glutamate synthase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 444 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|28869775|ref|NP_792394.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971275|ref|ZP_03399391.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato T1] gi|301385045|ref|ZP_07233463.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato Max13] gi|302059124|ref|ZP_07250665.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato K40] gi|28853020|gb|AAO56089.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923920|gb|EEB57499.1| glutamate synthase family protein [Pseudomonas syringae pv. tomato T1] gi|331014510|gb|EGH94566.1| glutamate synthase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 446 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|269104696|ref|ZP_06157392.1| L-lactate dehydrogenase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161336|gb|EEZ39833.1| L-lactate dehydrogenase [Photobacterium damselae subsp. damselae CIP 102761] Length = 387 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 111/374 (29%), Gaps = 73/374 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + G+ RN LI L + E+ + G+ P +S + G + Sbjct: 35 CNNEIGLKRNTDDIRKLELIPYYL--RDYQEISLKTKLFGETYDAPFGVSPI-GLQGLIW 91 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRV-----MFSDHNAIKSFELRQYAPHTV---LISNLG 124 + LA AA V + + + F+L A + L++ Sbjct: 92 PQAPEILAKAAFDHNVPFILSTVSTAPIETIAEITEGKMWFQLYHPADDAITDDLLARCK 151 Query: 125 AVQLNYDFGVQK----AHQAVHVLGADGLFLHL---NPLQEIIQPN--------GNTNFA 169 A + + A++ + + + N LQ + P G F Sbjct: 152 AAGVKTLVLLSDVPTFAYRPKEIKNGLAMPPKMTIPNILQIMASPEWALETLIKGKPEFR 211 Query: 170 DL--------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L K+ L D L+LK + + D E Sbjct: 212 TLTKYMPGSMNMHHLALFMDKTFNGRLSEEKVQKLRDKWDGNLVLKGLS---TVEDAEKA 268 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + G+ ++ GG S + +E+ + + Sbjct: 269 IHLGLDGIIVSNHGGRQLDAGPSTINKG-----------------IEILNACKGKTTIMM 311 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAAIESLRKEFIVSMFLLGTK 322 G+R G DI ++ G L F+ + A+ L+K+ M + + Sbjct: 312 DSGIREGSDIACTMAAGMDFTFLGRSFMYTVGALGHNGGNHAMNMLKKQLQQVMEQVCCE 371 Query: 323 RVQELYLNTALIRH 336 + Q+L + A I++ Sbjct: 372 KPQDLPNHLAEIKN 385 >gi|254463874|ref|ZP_05077285.1| glutamate synthase family protein [Rhodobacterales bacterium Y4I] gi|206684782|gb|EDZ45264.1| glutamate synthase family protein [Rhodobacterales bacterium Y4I] Length = 443 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K VG D L +K+G + G +G Sbjct: 202 RHPDWTGPDDLEIKILELREITGWQVPIYVK-VGGTRPYYDTALAVKAGADVVVLDGMQG 260 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A + Q I SGG+R G Sbjct: 261 GT-----------AATQDVFIEHVGLPTLACIRPAVQALQDLGVHREVQLIVSGGIRTGA 309 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ + + L Sbjct: 310 DVAKAMALGADAVAIGTAALIALGDNDPKWESEYQKL 346 >gi|83952268|ref|ZP_00961000.1| glutamate synthase family protein [Roseovarius nubinhibens ISM] gi|83837274|gb|EAP76571.1| glutamate synthase family protein [Roseovarius nubinhibens ISM] Length = 447 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 31/170 (18%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKILELREITNWEKPIYVK-VGGARPYYDTTLAVKAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G P + A + Q I SGG+R+G Sbjct: 263 GT-----------AATQDVFIEHVGQPILACIRDAVQALQDLDMHREVQLIVSGGIRSGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 D+ K++ LGA + + L D+ +E+ G Sbjct: 312 DVAKALALGADAVAIGTAALIALGDNDP-------RWEEEYQRLGTTTGA 354 >gi|194334880|ref|YP_002016740.1| ferredoxin-dependent glutamate synthase [Prosthecochloris aestuarii DSM 271] gi|194312698|gb|ACF47093.1| ferredoxin-dependent glutamate synthase [Prosthecochloris aestuarii DSM 271] Length = 547 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 90/246 (36%), Gaps = 36/246 (14%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 LS PL +S M+ G + I L+ AE +A G + M D S + A Sbjct: 213 LSMPLFVSDMSFGA--LGREIKIALSRGAETAGTGIASG-EGGMLEDEQRENSHYFYELA 269 Query: 115 PHTVLISNLG-------------AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 P A + + A + + G+ LH + + Sbjct: 270 PARFGWDIEKVARCQAFHFKAGQAAKTGVGGLLPAAKVSEEIARVRGVALHHDAVSPAGF 329 Query: 162 PNGN--TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + +F ++ ++ + +P+ K + DI+ L++G Y + GRGG Sbjct: 330 ADLKTPRDFRRVADEVRRATG--GIPVGFKMSAQHIEK-DIDFALEAGTDYIILDGRGGG 386 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDIL 274 + + ++ + G+PT +L AR + + I +GGLR + Sbjct: 387 TGAAP----------DLLKNNIGVPTIAALSRARAHLDKRQADGVTLIITGGLRTESHFI 436 Query: 275 KSIILG 280 K++ +G Sbjct: 437 KALAMG 442 >gi|330958710|gb|EGH58970.1| glutamate synthase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 446 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 348 >gi|288960688|ref|YP_003451028.1| glutamate synthase, large subunit [Azospirillum sp. B510] gi|288912996|dbj|BAI74484.1| glutamate synthase, large subunit [Azospirillum sp. B510] Length = 443 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +K+G + G G Sbjct: 202 RHPDWTGPDDLEIKIQELREITDWEKPIYVK-VGAARPYYDTALAVKAGADVVVLDGMQG 260 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 261 GTAATQEVFIEH----------VGIPLLAAIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 310 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K + LGA + + L D+ A+ A L Sbjct: 311 VAKCLALGADAVSIGTAALVALGDNDPALAAEYAEL 346 >gi|91762728|ref|ZP_01264693.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1002] gi|91718530|gb|EAS85180.1| Ferredoxin-dependent glutamate synthase peptide [Candidatus Pelagibacter ubique HTCC1002] Length = 512 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 109/294 (37%), Gaps = 40/294 (13%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK------KLSFPLLISSMTGGNNKMIERIN 76 ++D ++ L P + D+V+ + +GK L P+ +S M+ G +I Sbjct: 138 WEDIQILTAQLAKKPFLDNDKVETDI-IIGKNSNKPLTLKIPIFVSDMSFGALSEEAKI- 195 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSD-HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 LA AE + G ++ + N K F A L +Q + G Q Sbjct: 196 -ALAKGAEGAGTGICSGEGGMLLEEQKNNSKYFYELASAKFGYSEDKLKNIQAFHFKGGQ 254 Query: 136 KAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS--KIALLSSAM--DV 184 A V G + ++ I P+ + + K + + + Sbjct: 255 AAKTGTGGHLPGNKVKGKISEVRQIPEGEDAISPSTFKDLTTVDDFLKFSNRVRELTGGI 314 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+ K + DIE + + Y + GRGG + + RD + +P Sbjct: 315 PIGFKLSAQHIE-DDIEFAVSASADYIILDGRGGGTGAAPLIFRD----------NISVP 363 Query: 245 TPLSLEMARPYCNE-----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 T +L AR Y ++ I +GGLR D +K++ LGA +++ ++ Sbjct: 364 TIPALARARNYLDKKGYDHVSLIVTGGLRTSADFVKALALGADGIAISNSAMQA 417 >gi|330986062|gb|EGH84165.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010367|gb|EGH90423.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 446 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|298487375|ref|ZP_07005422.1| Glutamate synthase [NADPH] large chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158060|gb|EFH99133.1| Glutamate synthase [NADPH] large chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 444 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|289625943|ref|ZP_06458897.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646852|ref|ZP_06478195.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868815|gb|EGH03524.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 446 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|257486003|ref|ZP_05640044.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 405 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 163 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 221 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 222 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 271 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 272 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 307 >gi|257458445|ref|ZP_05623585.1| FMN-dependent dehydrogenase family protein [Treponema vincentii ATCC 35580] gi|257444146|gb|EEV19249.1| FMN-dependent dehydrogenase family protein [Treponema vincentii ATCC 35580] Length = 286 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 84/259 (32%), Gaps = 32/259 (12%) Query: 58 PLLISSMTGGNNKMI----ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 P+ ++ +TGG + +L A + +++G + L++Y Sbjct: 55 PIRLAPITGGVENVGYNDEAAFYFDLIEACAEAGFLLSIGDGCPDAKIQGGLA--ALQRY 112 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + + + ++G D ++ ++ ++Q + L Sbjct: 113 KKTGAVFIK-PYPNARIFERIDWVRSSADLIGIDIDSYNIVTMRNLVQLE-QKDARSL-- 168 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 L +P +K + ++EL + I+ GG IE+ R +D Sbjct: 169 --KELQRYAKMPFAIKGI---FLPENVELVKELRPDVAVISNHGGR----IETRRGSTAD 219 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + D R + E GGLR+ DI + LGA+ + P + Sbjct: 220 FLAEYGD----------TLRKFAGE--VWVDGGLRSRTDIAAAKQLGAAQVMIGRPCITA 267 Query: 294 AMDSS-DAVVAAIESLRKE 311 + V L ++ Sbjct: 268 LLSGGVTGVRKLYRRLTED 286 >gi|71733277|ref|YP_275095.1| glutamate synthase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553830|gb|AAZ33041.1| glutamate synthase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323584|gb|EFW79668.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328217|gb|EFW84221.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881952|gb|EGH16101.1| glutamate synthase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330890886|gb|EGH23547.1| glutamate synthase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 444 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|83717582|ref|YP_438442.1| L-lactate dehydrogenase [Burkholderia thailandensis E264] gi|257141490|ref|ZP_05589752.1| L-lactate dehydrogenase [Burkholderia thailandensis E264] gi|83651407|gb|ABC35471.1| L-lactate dehydrogenase [Burkholderia thailandensis E264] Length = 235 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 23/126 (18%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + L++K V L D + +G ++ GG Sbjct: 23 GWRD-VEWVRLRWGGKLIVKGV---LDPDDAIRAVDAGADARVVSNHGGRQLDGA----- 73 Query: 230 LESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + +L + A+ GG+R G D+LK++ LGA + Sbjct: 74 -------------MSSVEALPAVVDAAGRRAEVWLDGGVRTGQDVLKAVALGARGTMIGR 120 Query: 289 PFLKPA 294 FL Sbjct: 121 AFLYGV 126 >gi|150398483|ref|YP_001328950.1| ferredoxin-dependent glutamate synthase [Sinorhizobium medicae WSM419] gi|150029998|gb|ABR62115.1| ferredoxin-dependent glutamate synthase [Sinorhizobium medicae WSM419] Length = 442 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q + SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLVISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVAIGTAAL 328 >gi|66045516|ref|YP_235357.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae B728a] gi|63256223|gb|AAY37319.1| Ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae B728a] gi|330951984|gb|EGH52244.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae Cit 7] gi|330974508|gb|EGH74574.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 446 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|50085604|ref|YP_047114.1| putative glutamate synthase large subunit (GlxD) [Acinetobacter sp. ADP1] gi|49531580|emb|CAG69292.1| putative Glutamate synthase, large subunit region 2 FMN-binding (GlxD) [Acinetobacter sp. ADP1] Length = 444 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 203 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+R G D Sbjct: 262 GTAATQEVFIEH----------VGIPILSAIPQAIQALQEMGMHRKVQLIVSGGIRTGAD 311 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 312 VAKAMALGADAVAIGTAALIALGDNHPRLDDELKKI 347 >gi|302188154|ref|ZP_07264827.1| ferredoxin-dependent glutamate synthase [Pseudomonas syringae pv. syringae 642] Length = 446 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 204 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 262 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 263 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 312 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + + Sbjct: 313 VAKAMALGADAVAIGTAALIALGDNHPRLDEELRKI 348 >gi|291619566|ref|YP_003522308.1| LldD [Pantoea ananatis LMG 20103] gi|291154596|gb|ADD79180.1| LldD [Pantoea ananatis LMG 20103] Length = 343 Score = 69.5 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 22/110 (20%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + + + L++K + L D ++ G ++ GG Sbjct: 234 WKDLEWIRESWQGNLIIKGI---LEPEDARNAVRLGADGIVVSNHGGRQLDGA------- 283 Query: 232 SDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 +PT +L +A ++ + G+R+GVD+++ + LG Sbjct: 284 -----------VPTARALPRVADAVGDDLTVLVDSGIRSGVDVIRMLALG 322 >gi|158321476|ref|YP_001513983.1| dihydroorotate dehydrogenase family protein [Alkaliphilus oremlandii OhILAs] gi|158141675|gb|ABW19987.1| dihydroorotate dehydrogenase family protein [Alkaliphilus oremlandii OhILAs] Length = 372 Score = 69.5 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 105/319 (32%), Gaps = 37/319 (11%) Query: 45 DPSVEFLGKKLSFPLLISS--MTGGNNKMIERINRNLAIAAEKT-------KVAMAVGSQ 95 D SV FLG L P+++S+ +TG + M + I KT V + Sbjct: 2 DLSVNFLGLSLKNPIIVSAGPLTGSGSMMRKAIEAGAGAVVTKTIANEIRPNVRPRLVKG 61 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-----VQKAHQAVHVLGADGLF 150 R + F L ++ GAV + G + Q V GAD + Sbjct: 62 REGLHNIELYSGFTLEEWENEIAYAKIHGAVVIANILGHTSSEIAYIAQKVEQFGADAVE 121 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS----SMDIELGLKS 206 L ++ + + L + + +P+++K ++ + E S Sbjct: 122 LGVSCPHGEGLEGVISEPSKLYEFTKAVVDRIKIPVMVKLSSNTVNVVKLARAAEKAGAS 181 Query: 207 GIRYFD----IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 I D IAG IE R L G D P L+ + Sbjct: 182 AISGIDTVRSIAG------VDIEKGRVLLPTFGGYSGDAIRPIGLAAIASIAQATSIPIC 235 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR--------KEFIV 314 GG+ N IL+ ++LGAS + + + + ++ + E Sbjct: 236 GIGGITNYEHILEYMMLGASTVQVCTSIILNGYEHISTLLDGLNGWMAQHSYRNFDEIK- 294 Query: 315 SMFLLGTKRVQELYLNTAL 333 M L+ K +E+ + Sbjct: 295 GMALVSLKSFEEIKQEPYV 313 >gi|317149789|ref|XP_001823678.2| hypothetical protein AOR_1_1578114 [Aspergillus oryzae RIB40] Length = 715 Score = 69.5 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 86/269 (31%), Gaps = 60/269 (22%) Query: 32 IHRAL---PEISFD--EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 ++R+L P + D + D E LG K+ P+ +S ++ R A AE Sbjct: 138 VYRSLLLRPRVFVDCRKCDVETELLGWKVGLPIYVSPTA--MARLGHP--RGEAGIAEAC 193 Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 A+G+ +++ ++ + + + P T + VQL+ + + Sbjct: 194 G---ALGALQIIANNSSLSPEQVVAKALP-TQVFGWQLYVQLDRRASEAMLARVNRLDEI 249 Query: 147 DGLFLHLNPL-------QEIIQPNGNTN-------FAD------LSSKIALLSSAMDVPL 186 + L L+ E I + FA + + LS P+ Sbjct: 250 KFVILTLDAPVSGKREDDERINVKSHPAGSVSAQLFAGTDPSLTWNETLEWLSRHTKKPI 309 Query: 187 LLKEVGCGLSSMDIELGLKSGI--RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + K + + D+ + + + ++ GG S P Sbjct: 310 IFKGLQ---THEDVAIAARYTPLVQAVILSNHGGRSLDTAP------------------P 348 Query: 245 TPLSLEMARPYCNEA----QFIASGGLRN 269 +L R +C + GG+R Sbjct: 349 AVHTLLEVRKFCPHVFKKMEVWVDGGIRR 377 >gi|260430304|ref|ZP_05784278.1| glutamate synthase family protein [Citreicella sp. SE45] gi|260418776|gb|EEX12032.1| glutamate synthase family protein [Citreicella sp. SE45] Length = 441 Score = 69.5 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 31/170 (18%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D L +K+G + G +G Sbjct: 200 RHPDWTGPDDLEIKILELREITNWEKPIYIK-IGGARPYYDTALAVKAGADVVVLDGMQG 258 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q + SGG+R G Sbjct: 259 GT-----------AATQDVFIEHVGQPTLACIRPAVQALQDLGMHREVQLVVSGGIRTGA 307 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 D+ K++ LGA + + L D+ E+ G Sbjct: 308 DVAKALALGADAVAIGTAALIALGDNDP-------RWEAEYQKLGTTTGA 350 >gi|146308482|ref|YP_001188947.1| glutamate synthase (NADPH) GltB2 subunit [Pseudomonas mendocina ymp] gi|145576683|gb|ABP86215.1| glutamate synthase (NADPH) GltB2 subunit [Pseudomonas mendocina ymp] Length = 440 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 200 RHPDWTGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 259 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRQVQLIVSGGIRNGAD 308 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + ++ + Sbjct: 309 VAKAMALGADAVAIGTAALVALGDNHPRLDDELKKI 344 >gi|260173861|ref|ZP_05760273.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. D2] gi|315922124|ref|ZP_07918364.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695999|gb|EFS32834.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 325 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 100/289 (34%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSAGK--NKKLAEDGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLSEYLTLIKESKKVCPIPIIASINCYTDSEWIDFAKMIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSEVQYTYGSFEQRHIDILRHIKKTIKIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE + +I D IP + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIEKMEHISGEIFSNASDLAIP-LRWIGIASAVVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANAESVVKAILAGASAVEVCSAVYLNTNAFIGEANRFLSAWME 287 >gi|160882639|ref|ZP_02063642.1| hypothetical protein BACOVA_00592 [Bacteroides ovatus ATCC 8483] gi|237718404|ref|ZP_04548885.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_2_4] gi|293371407|ref|ZP_06617838.1| dihydroorotate oxidase [Bacteroides ovatus SD CMC 3f] gi|299149059|ref|ZP_07042121.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 3_1_23] gi|156111954|gb|EDO13699.1| hypothetical protein BACOVA_00592 [Bacteroides ovatus ATCC 8483] gi|229452337|gb|EEO58128.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_2_4] gi|292633604|gb|EFF52162.1| dihydroorotate oxidase [Bacteroides ovatus SD CMC 3f] gi|298513820|gb|EFI37707.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 3_1_23] Length = 325 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 100/289 (34%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSAGK--NKKLAEDGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLSEYLTLIKESKKVCPIPIIASINCYTDSEWIDFAKMIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSEVQYTYGSFEQRHIDILRHIKKTIKIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE + +I D IP + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIEKMEHISGEIFSNASDLAIP-LRWIGIASAVVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANAESVVKAILAGASAVEVCSAVYLNTNAFIGEANRFLSAWME 287 >gi|327399635|ref|YP_004340504.1| glutamate synthase [Hippea maritima DSM 10411] gi|327182264|gb|AEA34445.1| Glutamate synthase (NADPH) [Hippea maritima DSM 10411] Length = 504 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 98/337 (29%), Gaps = 69/337 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHN 103 +L P++ ++M+ G + + L AA++ G + Sbjct: 166 LELEVPIMFAAMSYGA--LSYNVIEALGRAAKEVGTYYNSGEGGLNKDHYKFKGNIIVQV 223 Query: 104 AIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAV---HVLGADGLFLHLNP 155 A F + + + Q + +K + + ++ + P Sbjct: 224 ASGRFGVHKDYLDVGSAIEIKIGQGAKPGIGGHLPGEKVSETISETRMMPKGSDAISPAP 283 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 ++ + P+ +K + ++G + G Sbjct: 284 HHDVYSIEDLRQLIYALKEATEYKK----PVAVKIAAVHNVAAIASGIARAGADIIVLDG 339 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRN 269 G + + + RD + G+P L+L + + + GG+RN Sbjct: 340 FKGGTGAAPQVIRD----------NVGLPIELALAVVDERLRQEGIRQDVSIVIGGGVRN 389 Query: 270 GVDILKSIILGASLGGLASPFLKPA------------------------------MDSSD 299 +D++K+I LGA + + L +S Sbjct: 390 SMDVVKAIALGADAVYIGTAALIAIGCTMCQQCHTGRCAWGISTQDPHLGKRVNPEIASK 449 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ +E E +M +G ++ L N +R Sbjct: 450 RLINLLEVWALEIKETMGAMGINSIESLRGNRLNLRG 486 >gi|332982271|ref|YP_004463712.1| glutamate synthase (NADPH) GltB2 subunit [Mahella australiensis 50-1 BON] gi|332699949|gb|AEE96890.1| glutamate synthase (NADPH) GltB2 subunit [Mahella australiensis 50-1 BON] Length = 500 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 110/331 (33%), Gaps = 61/331 (18%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS----QRVMFSDHNAIKSFEL 110 L P++ S+M+ G+ + LA AA + + G + N I Sbjct: 164 LKVPIMFSAMSFGSISLNAC--EALARAATELGIYYNTGEGGLHSSLYRYGKNTIAQVAS 221 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQEIIQPNGNT 166 ++ H ++ A+++ G + H +GA+ + P + I P + Sbjct: 222 GRFGVHADYLNTAAALEIKIGQGAKPGIGGHLPGEKVGAEVSATRMIPEGSDAISPAPHH 281 Query: 167 NF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + DL I L A + P+ +K + ++G I G G + Sbjct: 282 DIYSIEDLRQLIYALKEATNYTKPISVKIAAVHNVAAIASGIARAGADIIAIDGFRGGTG 341 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILK 275 + RD + GIP +++ ++ +A+G +RN DI+K Sbjct: 342 AAPLRIRD----------NVGIPIEMAIAAVDTRLKEEGIRHQVSVVAAGSMRNSADIIK 391 Query: 276 SIILGASLGGLASPFLKPA------------------------------MDSSDAVVAAI 305 +I LGA +A+ L + +V I Sbjct: 392 AIALGADAVYIATSALIAIGCHMCQKCNTGKCNWGIATQDPQLVKRLNPNIGARRLVNLI 451 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + E + +G ++ L N ++R Sbjct: 452 TAWEHEIKEMLGGMGINSIESLRGNREMLRG 482 >gi|254456354|ref|ZP_05069783.1| glutamate synthase large subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207083356|gb|EDZ60782.1| glutamate synthase large subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 439 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + VP+ +K + D L +K+G + G G Sbjct: 200 RHPDWTGPDDLKIKILELREITKWKVPIFIK-IAGARPYYDTALAVKAGADVVVLDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + + G PT ++ A + Q + SGG+RNG D Sbjct: 259 GTAATQEVFIE----------NVGQPTLACIKPAVDALQDLNSHREVQLVISGGIRNGGD 308 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + S + D+ L Sbjct: 309 VAKALALGADAVSIGSAAMIALGDNDPKWEKEYNML 344 >gi|312200399|ref|YP_004020460.1| glutamate synthase (NADPH) [Frankia sp. EuI1c] gi|311231735|gb|ADP84590.1| Glutamate synthase (NADPH) [Frankia sp. EuI1c] Length = 587 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 28/257 (10%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR- 111 +L PL +S M+ G + A T + G + +EL Sbjct: 255 LRLDIPLFVSDMSFGALSAEAKRALAAGAEAAGTAICSGEGGMLPEEQQACSRYLYELAS 314 Query: 112 -QYAPHTVLISNLGAVQLNYDFGVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 ++ ++ + A+ L G + V G L Q I P Sbjct: 315 ARFGWDEGHLAQVQALHLKLGQGAKTGTGGHLPGHKVTGRIAQVRGLREGQPAISPARFR 374 Query: 167 NFADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 ++ L L + + +P+ +K + S D++ L G+ Y + GRGG + Sbjct: 375 DWRSLDDA-RDLVNRVREVSGGIPVGVKMSAQHVES-DLDAALSLGVDYVILDGRGGGTG 432 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKS 276 + RD + +P+ +L AR + + + +A+GGLR D +K+ Sbjct: 433 AAPTIFRD----------NISVPSMAALARARRHLDRVGAEQVSLVATGGLRRPADFVKA 482 Query: 277 IILGASLGGLASPFLKP 293 + LGA +++ L+ Sbjct: 483 LALGADAVAVSNSALQA 499 >gi|300022045|ref|YP_003754656.1| ferredoxin-dependent glutamate synthase [Hyphomicrobium denitrificans ATCC 51888] gi|299523866|gb|ADJ22335.1| ferredoxin-dependent glutamate synthase [Hyphomicrobium denitrificans ATCC 51888] Length = 446 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 22/159 (13%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +K+G + G G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGTRPYYDTALAVKAGADVIVLDGMQG 259 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + G+P + A + Q I SGG+RNG D Sbjct: 260 GTAATQEVFIEH----------VGLPILACIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 309 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 K++ LGA + L D+ A+ A + E Sbjct: 310 AAKALALGADAVSIGMAALVALGDNDPALNAEYAKIGTE 348 >gi|119899303|ref|YP_934516.1| glutamate synthase large subunit [Azoarcus sp. BH72] gi|119671716|emb|CAL95629.1| glutamate synthase, large subunit [Azoarcus sp. BH72] Length = 447 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 22/142 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D+ L +K+G + G G Sbjct: 207 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGATRPYYDVALAVKAGADVVVLDGMQG 265 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 266 GTAATQEVFIEH----------VGIPILAAIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 315 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + K++ LGA + + L Sbjct: 316 VAKALALGADAVAIGTAALVAL 337 >gi|148262476|ref|YP_001229182.1| glutamate synthase (ferredoxin) [Geobacter uraniireducens Rf4] gi|146395976|gb|ABQ24609.1| glutamate synthase (ferredoxin) [Geobacter uraniireducens Rf4] Length = 1507 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + +EVD G L P+L S+M+ G+ E R A AA + + Sbjct: 838 VDPEEVD--TTVGGHDL--PILFSAMSFGSQ--GETPFRIYAEAARRLNIVCMNGEGGEI 891 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGA 146 A +G R A F + + +N+ +++ + V Sbjct: 892 ADMLGRYRQNRGQQIASGRFGV---NMEFLNSANILEIKVGQGAKPGEGGHLPGFKVTEK 948 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIE 201 H P +I P+ N + + +A + + + +K + Sbjct: 949 IAAARHATPGVSLISPSNNHDIYSIED-LAQIIEELRTANPQARISVKVPAVAGIATIAL 1007 Query: 202 LGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G I+G GGT + R + + G+ +A ++ + Sbjct: 1008 GIAKAGADIITISGYDGGTG-----AARRHAIKFVGLPAEIGVAEAHRALVAAGMRHKVE 1062 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG R G D+LK ++LGA+ G Sbjct: 1063 IWADGGARTGRDVLKLMLLGANRVGFG 1089 >gi|312866450|ref|ZP_07726668.1| dehydrogenase, FMN-dependent [Streptococcus downei F0415] gi|311098144|gb|EFQ56370.1| dehydrogenase, FMN-dependent [Streptococcus downei F0415] Length = 139 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 20/127 (15%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 L + ++ +P+++K V S D E+ +++G + ++ GG + + D+ Sbjct: 28 LPEDVKRITDYTHLPVIVKGVQ---DSDDAEVAIQAGAQGIWVSNHGGRQHNGGPASFDV 84 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I A+ I G+R G + K+++ GA + LA P Sbjct: 85 LEAI-----------------AKRVDKRVPIIFDSGIRRGSHVFKALVSGADVVALARPI 127 Query: 291 LKPAMDS 297 + Sbjct: 128 IYGLALG 134 >gi|307947007|ref|ZP_07662342.1| glutamate synthase family protein [Roseibium sp. TrichSKD4] gi|307770671|gb|EFO29897.1| glutamate synthase family protein [Roseibium sp. TrichSKD4] Length = 456 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 31/170 (18%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + A + P+ +K VG D L +K+G + G +G Sbjct: 213 RHPDWTGPDDLEIKILELREIMAWEKPIYVK-VGGTRPYYDTALAVKAGADVVVLDGMQG 271 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A + Q + SGG+R G Sbjct: 272 GT-----------AATQDVFIEHVGLPTLACIRPAVQALQDLGVHREVQLVVSGGIRTGA 320 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 D+ K++ LGA + + L D+ +E+ G Sbjct: 321 DVAKAMALGADAVAIGTAALIALGDNDPK-------WEEEYQKLGTTTGA 363 >gi|32566217|ref|NP_505218.2| hypothetical protein F41E6.5 [Caenorhabditis elegans] gi|23820843|gb|AAB65955.2| Hypothetical protein F41E6.5a [Caenorhabditis elegans] Length = 320 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 84/247 (34%), Gaps = 46/247 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 ++ + RN F++ + R L S + +D S+++L GKK FP+ I+ + Sbjct: 32 AEQEESLRRNISAFNNLLIRPRCL--RSVENIDTSIDWLNGKKSVFPVGIAPTA---FQK 86 Query: 72 IERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 + ++ L+ AA + + D F+L Y + Sbjct: 87 MATLDGELSTVRGAAASNSIMICSSWSTTSVEDIGKEAKIVGATIWFQLYVYKDRAITES 146 Query: 119 -----LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-----EIIQPNGNTNF 168 + + A+ L D V + L HL + P G+ Sbjct: 147 LIHRAEAAGVEALVLTVDTPV-LGRRLKDTYNKFSLPKHLKFANFESNTQAEMPKGHVGE 205 Query: 169 ADL-------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + + + ++P+++K V G D L L++G+ ++ Sbjct: 206 SGFMQYVSSQIDPSLDWNTLKWIRTKTNLPVIVKGVMRG---DDALLALEAGVDGIIVSN 262 Query: 216 RGGTSWS 222 GG Sbjct: 263 HGGRQMD 269 >gi|294085275|ref|YP_003552035.1| glutamate synthase family protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664850|gb|ADE39951.1| glutamate synthase family protein, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 446 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 92/300 (30%), Gaps = 44/300 (14%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD--------EVDPSVEFLGK--KLSFPLLISSMTGG 67 G R FDD + ++ + V F L P+ I+ M+ G Sbjct: 43 GAKRAVPHFDDLLFLGASISRYPLEGYRETCNTNVTLGTRFAKTPIHLDIPITIAGMSFG 102 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF------ELRQYAPHTVLIS 121 + L A + G + + K+ P + Sbjct: 103 ALSGGAK--EALGRGASAAGTSTTTGDGGMTEEERGHSKTLIYQYLPSRYGMNPDDLRRC 160 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFADLSSKIALL- 178 + + + + +D + N + I Q + ++ + Sbjct: 161 DAIEIVVGQGAKPGGGGMLLGQKISDRVAEMRNLPKGIDQRSACRHPDWTGPDDLEIKIL 220 Query: 179 ----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESD 233 + + P+ +K +G D L +K+G + G +GGT + Sbjct: 221 ELREITNWEKPIYVK-IGGARPYFDATLAVKAGADVIVLDGMQGGT-----------AAT 268 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + + G PT + A + Q I SGG+R+G D+ K++ LGA + Sbjct: 269 QDVFIEHVGQPTLACIRPAVQALQDMGLHREVQLIISGGIRHGADVAKALALGADAVSIG 328 >gi|229589812|ref|YP_002871931.1| putative glutamate synthase large subunit [Pseudomonas fluorescens SBW25] gi|229361678|emb|CAY48559.1| putative glutamate synthase large subunit [Pseudomonas fluorescens SBW25] Length = 440 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 200 RHPDWTGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 259 GTAATQEVFIEH----------VGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 308 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ +GA + + L D+ + A ++ + Sbjct: 309 VAKAMAMGADAVAIGTAALIALGDNHPRLDAELKKI 344 >gi|52352377|gb|AAU43667.1| glutamate synthase domain 2 [uncultured archaeon GZfos23H7] Length = 490 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 91/296 (30%), Gaps = 40/296 (13%) Query: 25 FFDDWHLIHRALP--EISFDEVDPSVEF-----LGKKLS--FPLLISSMTGGNNKMIERI 75 FD P E +E D S E GKK+S P M+ G+ + + Sbjct: 129 GFDRIFFN---FPKDEDGIEEEDISTEIDLNRRKGKKISIEVPFYGGGMSFGSVSLSVML 185 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHN-------AIKSFELRQYAPHTVLISNLGAVQ- 127 R A A T G +++ A F + + V I Q Sbjct: 186 ARAKAARAWGTFTCTGEGGYPEKLKEYDDNVITQVATGLFGVMEDTIQRVKIVEFKYAQG 245 Query: 128 --------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 L D + + + LF P + + D +I Sbjct: 246 AKPGLGGHLLGDKVTPEVARMREAVLGSSLFSPF-PFHSVYSVEDHKKHVDWIKEINP-- 302 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVF 238 DV + +K M +G + G GGT + + +++ I Sbjct: 303 ---DVIVSVKVSTPTDVDMVAVGSYYAGANIIHLDGSYGGTGAAPDIAKKNIAMPI---- 355 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ IP ++ IASGG+R D K+I LGA + + L Sbjct: 356 -EYAIPKVHEFLKGEGIRDKMTLIASGGIRTAHDAAKAIALGADGVVIGTAELVAL 410 >gi|84500662|ref|ZP_00998911.1| glutamate synthase family protein [Oceanicola batsensis HTCC2597] gi|84391615|gb|EAQ03947.1| glutamate synthase family protein [Oceanicola batsensis HTCC2597] Length = 439 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 19/134 (14%) Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQD 240 + P+ +K +G D L +K+G + G +GGT + + + Sbjct: 221 WEKPIYVK-IGGARPYYDTALAVKAGADVVVLDGMQGGT-----------AATQDVFIEH 268 Query: 241 WGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G PT + A + Q I SGG+R+G D+ K++ LGA + + L Sbjct: 269 VGQPTLACIRPAVAALQDLGMHREVQLIVSGGIRSGADVAKALALGADAVSIGTAALIAL 328 Query: 295 MDSSDAVVAAIESL 308 D+ +L Sbjct: 329 GDNDPKYEEEYRAL 342 >gi|116696130|ref|YP_841706.1| glutamate synthase [NADPH], glutamate synthase amidotransferase subunit [Ralstonia eutropha H16] gi|113530629|emb|CAJ96976.1| glutamate synthase [NADPH], Glutamate synthase amidotransferase domain [Ralstonia eutropha H16] Length = 451 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 22/142 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D+ L +K+G + G G Sbjct: 210 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGATRPYYDVALAVKAGADVVVLDGMQG 268 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 269 GTAATQEVFIEH----------VGIPILAAIRPAVKALQDLGMHRKVQLIVSGGIRNGAD 318 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + K++ LGA + + L Sbjct: 319 VAKALALGADAVAIGTAALVAL 340 >gi|297544743|ref|YP_003677045.1| glutamate synthase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842518|gb|ADH61034.1| Glutamate synthase (NADPH) [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 501 Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 51/225 (22%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A + P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYALKEATNYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQF 261 Y I G G + + + RD + GIP ++ + Sbjct: 329 ADYIAIDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 +A+G +RN DI+K+I LGA +A+ L Sbjct: 379 VAAGSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 439 LNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|46199406|ref|YP_005073.1| glutamate synthase [NADPH] large chain [Thermus thermophilus HB27] gi|46197031|gb|AAS81446.1| glutamate synthase [NADPH] large chain [Thermus thermophilus HB27] Length = 1492 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 129/388 (33%), Gaps = 86/388 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++ + R+ +++ +EVD SV G S P +IS+M+ G+ Sbjct: 801 ALERENPVAARQLLE-VRFPERS--DVAPEEVDLSV---GAH-SLPFVISAMSFGSQ--G 851 Query: 73 ERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLI 120 E R A AA++ + +G A F + Y +V+ Sbjct: 852 EASFRAYAEAAKRLNMLCINGEGGEIPDMLGKYTPWRGQQVASGRFGVHAYMLNSASVIE 911 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +G + G + + A + P ++I P+ N + + L+ Sbjct: 912 IKIGQGAKPGEGGHLPGKKVSPKVAAARNAV---PGVDLISPSNNHDLYSIEDLAQLIEE 968 Query: 181 ----------AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRD 229 ++ VP++ G+ ++ + + K+G ++G GGT + R Sbjct: 969 LKTVNPKALVSVKVPVI-----PGIGTIAVGIA-KAGADVITLSGFEGGTG-----AARL 1017 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-- 287 + + G+ + ++ + A GGL+ D+L+ ++LGA G+A Sbjct: 1018 HALKYAGLPVELGVRRVHRALVRAGLRDKVEIWADGGLKTAYDVLRMVLLGADRVGMATM 1077 Query: 288 --------------------------------------SPFLKPAMDSSDAVVAAIESLR 309 + + + + ++ Sbjct: 1078 AMVAIGCTICRGCQLDTCHVGITTQIETVEEAMAHGLKRFVPQDLDRAVEQLTRFFGAMG 1137 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + LG + +QEL + L+ + Sbjct: 1138 EALRELVAALGARSLQELRGRSDLLYQR 1165 >gi|55981437|ref|YP_144734.1| glutamate synthase, large subunit [Thermus thermophilus HB8] gi|55772850|dbj|BAD71291.1| glutamate synthase, large subunit [Thermus thermophilus HB8] Length = 1492 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 129/388 (33%), Gaps = 86/388 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + ++ + R+ +++ +EVD SV G S P +IS+M+ G+ Sbjct: 801 ALERENPVAARQLLE-VRFPERS--DVAPEEVDLSV---GAH-SLPFVISAMSFGSQ--G 851 Query: 73 ERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLI 120 E R A AA++ + +G A F + Y +V+ Sbjct: 852 EASFRAYAEAAKRLNMLCINGEGGEIPDMLGKYTPWRGQQVASGRFGVHAYMLNSASVIE 911 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 +G + G + + A + P ++I P+ N + + L+ Sbjct: 912 IKIGQGAKPGEGGHLPGKKVSPKVAAARNAV---PGVDLISPSNNHDLYSIEDLAQLIEE 968 Query: 181 ----------AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRD 229 ++ VP++ G+ ++ + + K+G ++G GGT + R Sbjct: 969 LKTVNPKALVSVKVPVI-----PGIGTIAVGIA-KAGADVITLSGFEGGTG-----AARL 1017 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-- 287 + + G+ + ++ + A GGL+ D+L+ ++LGA G+A Sbjct: 1018 HALKYAGLPVELGVRRVHRALVRAGLRDKVEIWADGGLKTAYDVLRMVLLGADRVGMATM 1077 Query: 288 --------------------------------------SPFLKPAMDSSDAVVAAIESLR 309 + + + + ++ Sbjct: 1078 AMVAIGCTICRGCQLDTCHVGITTQIETVEEAMAHGLKRFVPQDLDRAVEQLTRFFGAMG 1137 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + + LG + +QEL + L+ + Sbjct: 1138 EALRELVAALGARSLQELRGRSDLLYQR 1165 >gi|171056860|ref|YP_001789209.1| ferredoxin-dependent glutamate synthase [Leptothrix cholodnii SP-6] gi|170774305|gb|ACB32444.1| ferredoxin-dependent glutamate synthase [Leptothrix cholodnii SP-6] Length = 456 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%) Query: 164 GNTNFADLSS---KIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ KI L D +P+ +K VG D++L + +G + G G Sbjct: 206 RHPDWTGPDDLAIKIQELRELTDWQIPIYVK-VGATRVFNDVKLAVHAGADVVVVDGMQG 264 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLE------MARPYCNEAQFIASGGLRNGVD 272 + + + GIPT ++ + Q I SGG+R G D Sbjct: 265 GTAATQTCFIEHA----------GIPTLAAVRLAVAALEDLDMIGKVQLIVSGGIRTGAD 314 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + K++ LGA + L Sbjct: 315 VAKALALGADAVAIGQGVLMAL 336 >gi|312960313|ref|ZP_07774824.1| glutamate synthase family protein [Pseudomonas fluorescens WH6] gi|311285535|gb|EFQ64105.1| glutamate synthase family protein [Pseudomonas fluorescens WH6] Length = 440 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 200 RHPDWTGPDDLAIKIAELREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 259 GTAATQEVFIEH----------VGIPILSAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 308 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ +GA + + L D+ + A ++ + Sbjct: 309 VAKAMAMGADAVAIGTAALIALGDNHPRLDAELKKI 344 >gi|254478599|ref|ZP_05091972.1| hypothetical protein CDSM653_317 [Carboxydibrachium pacificum DSM 12653] gi|214035453|gb|EEB76154.1| hypothetical protein CDSM653_317 [Carboxydibrachium pacificum DSM 12653] Length = 501 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 74/225 (32%), Gaps = 51/225 (22%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLTQLIYALKEATDYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQF 261 Y I G G + + + RD + GIP ++ + Sbjct: 329 ADYIAIDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 +A+G +RN DI+K+I LGA +A+ L Sbjct: 379 VAAGSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCYTGKCNWGIATQDPNLVKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 439 LNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|81428280|ref|YP_395280.1| L-lactate oxidase (central fragment), degenerate [Lactobacillus sakei subsp. sakei 23K] gi|78609922|emb|CAI54969.1| L-lactate oxidase (central fragment), degenerate [Lactobacillus sakei subsp. sakei 23K] Length = 243 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 20/116 (17%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + I + +P+++K + S +D EL +++G ++ GG + ++ Sbjct: 144 VPEDIQKIKEITHLPVIVKGIQ---SPVDAELAIQAGADGIWVSNHGGRQLDGGSASFEV 200 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 +A+ I G+R G + K++ GA L Sbjct: 201 LP-----------------LVAQQVAKRVPIIFDSGVRRGEHVFKALASGADLVAQ 239 >gi|220914258|ref|YP_002489567.1| ferredoxin-dependent glutamate synthase [Arthrobacter chlorophenolicus A6] gi|219861136|gb|ACL41478.1| ferredoxin-dependent glutamate synthase [Arthrobacter chlorophenolicus A6] Length = 458 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 30/146 (20%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + P+ +K +G D L +KSG + G +G Sbjct: 216 RHPDWTGPDDLEIKIGELREITGWKTPIYVK-IGASRPYYDTALAVKSGADVVVVDGMQG 274 Query: 218 GT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLR 268 GT IE+ GIPT ++ A E Q I SGG+R Sbjct: 275 GTAATQQVFIENV--------------GIPTLAAIPQAVQALQELGVHRKVQLIVSGGIR 320 Query: 269 NGVDILKSIILGASLGGLASPFLKPA 294 G D+ K++ LGA + + L Sbjct: 321 TGADVAKAMALGADAVAIGTAALIAL 346 >gi|295696399|ref|YP_003589637.1| Glutamate synthase (ferredoxin) [Bacillus tusciae DSM 2912] gi|295412001|gb|ADG06493.1| Glutamate synthase (ferredoxin) [Bacillus tusciae DSM 2912] Length = 1522 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 31/267 (11%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK-VAM------ 90 + DEVD SV G+ S P LISSM+ G+ R A AA++ VAM Sbjct: 848 GVDPDEVDLSV---GEH-SLPFLISSMSFGSQNETAY--RAYAEAAKQLDMVAMNGEGGE 901 Query: 91 ---AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV--HVLG 145 +G A F + + +N+ +++ + V Sbjct: 902 IKDMIGKYPKHRGLQVASGRFGVNIELCNA---ANILEIKIGQGAKPGEGGHLPGSKVSA 958 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIE 201 + P ++I P+ N + + ++ ++ + + +K Sbjct: 959 KVAAARNAQPGIDLISPSNNHDIYSIEDLAQMIDELKTANPNARVSVKVPVVPNIGTIAV 1018 Query: 202 LGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G ++G GGT +R + + + + + G+ ++ + Sbjct: 1019 GIAKAGADIITLSGYDGGTGAARAHALKHVGLPV-----EIGVRHAHVALTEAGLRDQVE 1073 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GGL++G+D++K I+LGA+ G A Sbjct: 1074 IWADGGLKSGLDVVKMILLGANRCGFA 1100 >gi|282163379|ref|YP_003355764.1| glutamate synthase large subunit domain 2 [Methanocella paludicola SANAE] gi|282155693|dbj|BAI60781.1| glutamate synthase large subunit domain 2 [Methanocella paludicola SANAE] Length = 508 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 115/344 (33%), Gaps = 70/344 (20%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D + F +L P++ +M+ G + ++++L +AA++ M G + + Sbjct: 165 DLAPNF---RLDIPVIFGAMSYGA--ISYNVHKSLMLAAKECGTLMNTGEGGLHRDFYQY 219 Query: 105 IKS---------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLF 150 + F + + + + + Q + +K + V + Sbjct: 220 KDNVIVQCASGRFGVTEEYLNAGALVEIKIGQGAKPGIGGHLPGEKVSEDVSKTR--MIP 277 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGI 208 + + L + + DLS I L A + P+ +K + +++G Sbjct: 278 VGTDALSPAPHHDI-YSIEDLSQLIYALKEATEYKKPVSVKVAAVHNIAAICSGIVRAGA 336 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFI 262 I G G + S RD + GIP L+L A N+A + Sbjct: 337 DIVTIDGFRGGTGSAPRIMRD----------NVGIPIELALAAVDDRLRAEGIRNQASIV 386 Query: 263 ASGGLRNGVDILKSIILGASLG-------------------------GLA--SPFLKPAM 295 GG+R D++K+I LGA G+A P L + Sbjct: 387 VGGGIRQSADVVKAIALGADAVMIGTAALVALGCRVCQKCNTGNCSWGIATQKPHLTARL 446 Query: 296 D---SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 D + + + + E + LG V+ L N +R Sbjct: 447 DPEIGAQRLTNLLSAWSHEIQEVLGALGINSVESLRGNRERLRG 490 >gi|167614905|ref|ZP_02383540.1| L-lactate dehydrogenase [Burkholderia thailandensis Bt4] Length = 204 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 23/126 (18%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + L++K V L D + +G ++ GG Sbjct: 23 GWRD-VEWVRLRWGGKLIVKGV---LDPDDAIRAVDAGADARVVSNHGGRQLDGA----- 73 Query: 230 LESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + +L + A+ GG+R G D+LK++ LGA + Sbjct: 74 -------------MSSVEALPAVVDAAGRRAEVWLDGGVRTGQDVLKAVALGARGTMIGR 120 Query: 289 PFLKPA 294 FL Sbjct: 121 AFLYGV 126 >gi|167033256|ref|YP_001668487.1| ferredoxin-dependent glutamate synthase [Pseudomonas putida GB-1] gi|166859744|gb|ABY98151.1| ferredoxin-dependent glutamate synthase [Pseudomonas putida GB-1] Length = 441 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ ++ + P+ +K +G D++L +K+G + G G Sbjct: 200 RHPDWTGPDDLAIKIAEIREITDWEKPIYVK-IGASRPYYDVKLAVKAGADVIVLDGMQG 258 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A E Q I SGG+RNG D Sbjct: 259 GTAATQEVFIEH----------VGIPILPAIPQAVQALQEMGMHRKVQLIVSGGIRNGAD 308 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ + + ++ + Sbjct: 309 VAKAMALGADAVAIGTAALIALGDNHPRLDSELKKI 344 >gi|147921293|ref|YP_684893.1| NADPH-dependent glutamate synthase large subunit [uncultured methanogenic archaeon RC-I] gi|110620289|emb|CAJ35567.1| NADPH-dependent glutamate synthase, large subunit domain 2 [uncultured methanogenic archaeon RC-I] Length = 503 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 112/341 (32%), Gaps = 62/341 (18%) Query: 46 PSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 E KL FP++ M+ G+ + ++++L +AAE+T + M G Sbjct: 157 LRTEMAQNLKLDFPIVFGGMSYGS--VSYNVHKSLMLAAERTGILMNTG------EGGLH 208 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD--GLFLHL---NPLQEI 159 ++ R ++ G ++ ++ A + + G+ HL ++I Sbjct: 209 QDLYQHRN---SVIVQCASGRFGVHAEYLNDGAAIEIKIGQGAKPGIGGHLPGEKVSEDI 265 Query: 160 IQPNGNTNFADLSS-----KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + D S I + + LKE + +++ I + Sbjct: 266 SRTRMIPKGTDALSPAPHHDIYSIEDLGQLIFALKEASRYKKPVGVKVAAVHNIAAI-CS 324 Query: 215 G--RGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMA------RPYCNEAQFIASG 265 G R G + I+ R + +D GIP L++ N+A + G Sbjct: 325 GIVRAGADFVTIDGFRGGTGAAPRIIRDNVGIPVELAIAAVDDRLRQEGIRNQASILCGG 384 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA------------------------------M 295 G+R D++K+I LGA + + L Sbjct: 385 GIRQSADMIKAIALGADAVVIGTSALVALGCRVCQKCNTGKCSWGIATQNPKLTARLDPE 444 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + I + E + LG ++ L + +R Sbjct: 445 EGAQRLTNLIHAWGHEMEEVLGALGVNSIESLRGSRERLRG 485 >gi|284929198|ref|YP_003421720.1| IMP dehydrogenase family protein [cyanobacterium UCYN-A] gi|284809642|gb|ADB95339.1| IMP dehydrogenase family protein [cyanobacterium UCYN-A] Length = 392 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 115/390 (29%), Gaps = 89/390 (22%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 ++I+ R ++ L+ L +D S G K P+L S+M G Sbjct: 6 VDIIIGYGKKARRAYGMNEIALVPGTCTL---DPALIDTSWSIGGIKRDIPILASAMDGV 62 Query: 67 ---------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS---DHNAIKSF 108 G + R K+A ++ V IK Sbjct: 63 VDVKMANLLSDLGAIGVLNLEGIQTRYDDTTPIIEKIASVGKTEFVELMQKLYAEPIKPE 122 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 +++ + ++ AV L G K + V GAD LF+ Q + + Sbjct: 123 LIKKRIENIKSSGSIAAVSLTP-LGASKYGKIVADSGADLLFV-----QATVVSTNHLTP 176 Query: 169 ADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 +SS + M +P++ G ++ +++G + G + + Sbjct: 177 ESISSLDLQQFCKDMPIPVVF---GNCVTYEVALELMEAGAAGILVGIGPGAACT----- 228 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIIL 279 G+P P ++ +E IA GG+ G DI K I Sbjct: 229 -------SRGVLGIGVPQPTAIADCAAARDEYYKRTGVYTPIIADGGIITGGDICKCIAC 281 Query: 280 GASLGGLASPFLKPAMD------------------------SSDAVVAAI---------- 305 GA + SP + + + + Sbjct: 282 GADSVMIGSPVARAVEAPGRGYHWGMATPSPVLPRGTRINVGTTGTIEEVLIGPAKLDDG 341 Query: 306 -ESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++E+ +I Sbjct: 342 THNLLGALKTSMSTLGAQNIKEMQKVEVVI 371 >gi|118467407|ref|YP_889829.1| ferredoxin-dependent glutamate synthase [Mycobacterium smegmatis str. MC2 155] gi|118168694|gb|ABK69590.1| ferredoxin-dependent glutamate synthase [Mycobacterium smegmatis str. MC2 155] Length = 542 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 103/295 (34%), Gaps = 41/295 (13%) Query: 25 FFDDWHLIHRA----LPEISFDEVDPSVEFL-GKK----LSFPLLISSMTGGNNKMIERI 75 +D L+ A LP + + V G K L PL +S M+ G + Sbjct: 173 SWDSIQLV-TAQLARLPLLDQEPVSTETVIGPGAKRPLVLDIPLFVSDMSFGALSEEAKT 231 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 T + G N+ +EL +L VQ + G Q Sbjct: 232 ALAAGAELAGTGICSGEGGMLPEEQQENSRYFYELASGR-FGWSFEHLHKVQAFHFKGGQ 290 Query: 136 KAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNF------ADLSSKIALLSSAM 182 A V+G L P I P ++ D ++++ +S Sbjct: 291 GAKTGTGGHLPGSKVVGKIADVRGLPPGTSAISPARFPDWTSLAEYRDFAAQVRDISG-- 348 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +P+ K + D++ L+ G+ Y + GRGG + S S Sbjct: 349 GIPVGYKLSAQHIER-DLDAALEIGVDYVILDGRGGGTGSAPTIFPRHIS---------- 397 Query: 243 IPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +PT +L AR + + +GG+R D++K++ LGA G+A+ ++ Sbjct: 398 VPTIPALARARRHLDRSESRITLAVTGGIRTPADMVKALALGADAIGVANSAIQA 452 >gi|330834263|ref|YP_004408991.1| glutamate synthase (NADPH) GltB2 subunit [Metallosphaera cuprina Ar-4] gi|329566402|gb|AEB94507.1| glutamate synthase (NADPH) GltB2 subunit [Metallosphaera cuprina Ar-4] Length = 712 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 105/381 (27%), Gaps = 64/381 (16%) Query: 8 DHIN-IVCKDPGIDRNKKFFDDWHLIHRALPEISFDEV------DPSVEFLGKKLSFPLL 60 +HI + + K D ++ R +I+ +V + F G ++ PL Sbjct: 25 EHIRKLSMSAEPFEIFKSRRDSLRILDRVEFKIAESKVVKNPSASTGLSFSGIDMTSPLY 84 Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 + M+ G + N +A AA+ T G + + F A V + Sbjct: 85 LGDMSYGA--LSGNPNVAIAEAADITGTLAGTGEGGLHPDVAKHKRIFVQWASARFGVDV 142 Query: 121 SNLGAVQLNYDFGVQKAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 L A Q A + V + + I P + + + Sbjct: 143 DVLNAGLGVVIKIGQGAKPGIGGHLPGSKVTEPISKTRRIPVGMDAISPAPHHDIYSIED 202 Query: 174 ---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 +I L P+ +K + + I G G + + RD Sbjct: 203 LGQRIEALKELTGKPVFVKVAATNYIPYVVSGIARMKADGVIIDGHGAGTGATPSVIRD- 261 Query: 231 ESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + GIP + S+ IA+G + + D K I LGA + Sbjct: 262 ---------NVGIPIELAVASADSVLRREGLRQNFTIIAAGRVADSTDAAKLIALGADIV 312 Query: 285 GLASPFLKP-----------------------------AMDSSDAVVAAIESLRKEFIVS 315 + + L + +V + E Sbjct: 313 SVGTGALIAMGCVMVHKCHIGSCPTALTNKIDGTRYMDLEFGTKMLVNFVRGFSLELSNI 372 Query: 316 MFLLGTKRVQELYLNTALIRH 336 + L + EL L+ Sbjct: 373 LDNLNLSTISELRGRRDLLYG 393 >gi|297617733|ref|YP_003702892.1| glutamate synthase (NADPH) [Syntrophothermus lipocalidus DSM 12680] gi|297145570|gb|ADI02327.1| Glutamate synthase (NADPH) [Syntrophothermus lipocalidus DSM 12680] Length = 500 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 105/336 (31%), Gaps = 67/336 (19%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L P++ S+M+ G+ + + ++LA AA +T + G + +R Sbjct: 162 LELDVPVMFSAMSFGSISLNAQ--KSLARAAVETGIYWNCGEGGLHPE---------VRP 210 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN----- 167 YA V+ G ++ D+ A + + + + E + P + Sbjct: 211 YADRAVVQVASGRFGVSVDYLKSGAAIEIKIGQGAKPGIGGHLPGEKVGPEVSRTRMIPL 270 Query: 168 --------FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RG 217 I L + LKE + +++ + +G R Sbjct: 271 GTDAISPAPHHDIYSIEDLRQLI---FSLKEATEYAKPVGVKIAAVHNVAAI-ASGSVRA 326 Query: 218 GTSWSRIESHRDL-ESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNG 270 G + I+ R + + + GIP L+L N + +GG+RN Sbjct: 327 GADFLVIDGFRGGTGAAPLRIRDNIGIPIELALAAVDSRLREEGIRNTVSLVVAGGIRNS 386 Query: 271 VDILKSIILGASLGGLASPFLKPA------------------------------MDSSDA 300 D++K+I LGA + + L + Sbjct: 387 ADVVKAIALGADAVYIGTAALIALGCHMCQKCYQGKCNWGIATTNPYLTKRVNPEVGARR 446 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I + E + +G ++ L N +R Sbjct: 447 AANLIRAWAHEIKEMLGGMGINAIESLRGNRLHLRG 482 >gi|167039218|ref|YP_001662203.1| glutamate synthase [Thermoanaerobacter sp. X514] gi|256752227|ref|ZP_05493091.1| Glutamate synthase (NADPH) [Thermoanaerobacter ethanolicus CCSD1] gi|300915517|ref|ZP_07132828.1| Glutamate synthase (NADPH) [Thermoanaerobacter sp. X561] gi|307723799|ref|YP_003903550.1| glutamate synthase [Thermoanaerobacter sp. X513] gi|166853458|gb|ABY91867.1| Glutamate synthase (NADPH) [Thermoanaerobacter sp. X514] gi|256748879|gb|EEU61919.1| Glutamate synthase (NADPH) [Thermoanaerobacter ethanolicus CCSD1] gi|300888415|gb|EFK83566.1| Glutamate synthase (NADPH) [Thermoanaerobacter sp. X561] gi|307580860|gb|ADN54259.1| Glutamate synthase (NADPH) [Thermoanaerobacter sp. X513] Length = 501 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 41/220 (18%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 Y I G RGGT I I F I + + + +A+G Sbjct: 329 ADYIAIDGFRGGT--GAAPKRIRDNVGIPIEFA---IAAVDARLRSEGIRHTISLVAAGS 383 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA------------------------------MD 296 +RN DI+K+I LGA +A+ L Sbjct: 384 IRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEI 443 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 444 GYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|167038059|ref|YP_001665637.1| glutamate synthase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116468|ref|YP_004186627.1| Glutamate synthase (NADPH) [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856893|gb|ABY95301.1| Glutamate synthase (NADPH) [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929559|gb|ADV80244.1| Glutamate synthase (NADPH) [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 501 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 41/220 (18%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 Y I G RGGT I I F I + + + +A+G Sbjct: 329 ADYIAIDGFRGGT--GAAPKRIRDNVGIPIEFA---IAAVDARLRSEGIRHTISLVAAGS 383 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA------------------------------MD 296 +RN DI+K+I LGA +A+ L Sbjct: 384 IRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEI 443 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 444 GYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|255576603|ref|XP_002529192.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] gi|223531370|gb|EEF33206.1| (S)-2-hydroxy-acid oxidase, putative [Ricinus communis] Length = 146 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 27/159 (16%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L S + +L+K V L+ D ++ GI ++ G + Sbjct: 3 VEWLKSITTLSILIKGV---LTGEDAVKAVEIGIAGIIVSNHGARQLDYTPA-------- 51 Query: 235 GIVFQDWGIPTPLSLEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 T +LE + + GG+R + + L + Sbjct: 52 ----------TISALEEVVHAVGGKILVLLDGGIRRELMYSRHWHSIGRLV-----IYRL 96 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 A+ D V ++ L+ E ++M L G ++++ + Sbjct: 97 AVKGEDGVRQVMKILKDELELTMALSGCPSLKDITRSHV 135 >gi|300022306|ref|YP_003754917.1| ferredoxin-dependent glutamate synthase [Hyphomicrobium denitrificans ATCC 51888] gi|299524127|gb|ADJ22596.1| ferredoxin-dependent glutamate synthase [Hyphomicrobium denitrificans ATCC 51888] Length = 443 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 65/182 (35%), Gaps = 25/182 (13%) Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 QL + A + GAD L + + QE+ D P+ Sbjct: 192 QLPKGIDQRSACRHPDWTGADDLEIKI---QEL------REITDWEK-----------PI 231 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 LK VG D+ L +K+G + G G + + E + +GI IP Sbjct: 232 YLK-VGASRPYFDVNLAVKAGADVIVLDGMQGGTAATQEVFIE---HVGIPLLS-AIPPA 286 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + + Q I SGG+R G D+ K++ LGA + + L D+ E Sbjct: 287 VKALQDLGMHRKVQLIVSGGIRTGADVAKALALGADAVAVGTAALVALGDNDPKWDKEYE 346 Query: 307 SL 308 L Sbjct: 347 KL 348 >gi|307266506|ref|ZP_07548040.1| Glutamate synthase (NADPH) [Thermoanaerobacter wiegelii Rt8.B1] gi|306918486|gb|EFN48726.1| Glutamate synthase (NADPH) [Thermoanaerobacter wiegelii Rt8.B1] Length = 501 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 41/220 (18%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 Y I G RGGT I I F I + + + +A+G Sbjct: 329 ADYIAIDGFRGGT--GAAPKRIRDNVGIPIEFA---IAAVDARLRSEGIRHTISLVAAGS 383 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA------------------------------MD 296 +RN DI+K+I LGA +A+ L Sbjct: 384 IRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNPEI 443 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 444 GYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|82702927|ref|YP_412493.1| ferredoxin-dependent glutamate synthase [Nitrosospira multiformis ATCC 25196] gi|82410992|gb|ABB75101.1| Ferredoxin-dependent glutamate synthase [Nitrosospira multiformis ATCC 25196] Length = 440 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 108/314 (34%), Gaps = 66/314 (21%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERINR 77 +DD ++ L P I VD + + L PLL+ M+ G + + Sbjct: 55 WDDIQILTAQLHKKPLIDDAPVDTQLVIGPRAQKPLVLDIPLLVGDMSYGALSKRAK--Q 112 Query: 78 NLAIAAEKTKVAMA--------------------VGSQRVMFSDHNAIKSFE------LR 111 L+ A+ A+ +GS R ++ + F ++ Sbjct: 113 ALSKGADLAGTAICSGEGGILGDELELNQSYMFELGSARNGLKKNSDLSQFSKDFKGKVK 172 Query: 112 QYAPHTVLISNLGAV-QLNYDFGVQKAHQAVHV-LGADGLFLHLNPLQEIIQPNGNTNFA 169 + + G L ++ +A + +G D + + +FA Sbjct: 173 AFHFKGGQAAKTGTGGHLPGGKVTEEIAKARQIEVGKDAIS-----PSTFADFHTPRDFA 227 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 D + +I +P+ K + D+ L +G Y + GRGG++ + RD Sbjct: 228 DFADQIRD--QMGGIPIGFKISANHIE-DDMRFALDAGADYIILDGRGGSTGAAPGIFRD 284 Query: 230 LESDIGIVFQDWGIPTPLSLEMARP----------YCNEAQFIASGGLRNGVDILKSIIL 279 S +PT +L AR N I +GGLR D +K++ L Sbjct: 285 HIS----------VPTIAALARARKFLDVAGHEKGAKNSVTLIITGGLRIPSDFIKALAL 334 Query: 280 GASLGGLASPFLKP 293 GA LA+ L+ Sbjct: 335 GADGIALANSALQA 348 >gi|119357372|ref|YP_912016.1| glutamate synthase (NADPH) GltB2 subunit [Chlorobium phaeobacteroides DSM 266] gi|119354721|gb|ABL65592.1| glutamate synthase (NADPH) GltB2 subunit [Chlorobium phaeobacteroides DSM 266] Length = 529 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 109/329 (33%), Gaps = 68/329 (20%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSDHN 103 L P+ +S M+ G ++ LA + + K AM G S R +F Sbjct: 202 LETPVFVSHMSFGALSREAKL--ALAKGSAQAKTAMCSGEGGILPESLKASYRYIFEY-- 257 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 + + V + Q G+ V Q+II P+ Sbjct: 258 VPNKYSVTDENLRLVDAVEIKIGQSAKP-GMGGHLPGNKVTREIAAIRGFREGQDIISPS 316 Query: 164 GNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + S + + P+ +K + G DI++ L +G+ + I GR G Sbjct: 317 HFPDIRS-KEDLKATVSHLRLKTGGKPIGIK-LAAGHIEEDIDIALFAGVDFITIDGRAG 374 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDI 273 + + + ++ S +PT +L AR + I +GGLR D Sbjct: 375 GTGASPKVVKNAAS----------VPTIFALARARKILDLRGADTVSLIVTGGLRVSSDF 424 Query: 274 LKSIILGASL-------------------------GGLAS--PFLKPAMD---SSDAVVA 303 K++ +GA G+A+ P L+ MD S+ V Sbjct: 425 AKALAMGADAIAVGTAAMMAVGCQQYRICNTDKCPVGIATQDPALRARMDVDKSAMRVAN 484 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +++ +E L G V L + Sbjct: 485 FFKAVTEELRDFARLTGNDNVHHLSQDDL 513 >gi|308270335|emb|CBX26947.1| hypothetical protein N47_A09760 [uncultured Desulfobacterium sp.] Length = 507 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 97/307 (31%), Gaps = 46/307 (14%) Query: 16 DPGIDRNKKFFDDWHLIHRALPE---ISFDEVDPSVEF-LGKK--------LSFPLLISS 63 + + + FD + L E I + D L K+ +S P Sbjct: 118 EYNLGNSGGGFDKMRF--KLLDEGKYIDLADEDIDTSIVLNKRSDGRPELTISIPCYGGG 175 Query: 64 MTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDHNAIKSFELRQ-- 112 M+ G+ + + R A AA+K G A F +R+ Sbjct: 176 MSFGSTALNVMVGR--ARAAQKLNTLTCTGEGGYPEELVPYADHVITQIATGLFGVREKT 233 Query: 113 --YAPHTVLISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 YAP GA L D K + + LF P + + Sbjct: 234 IKYAPVVEFKYAQGAKPGLGGHLLGDKVTPKVAAMRETVVGNPLFSPF-PFHSVYSVEDH 292 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRI 224 D +I + +K M +G I G GGT + Sbjct: 293 KKHVDWVKEINPRVL-----VSVKVSTPSDVDMVAVGSYYAGAHIVHIDGSYGGTGAAPD 347 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + +++ I ++ IP ++ IASGG+RNG+D+ K+I LGA Sbjct: 348 IAKKNIAMPI-----EYAIPKVHKFLTDEGVRDKICLIASGGIRNGMDVAKAIALGADGV 402 Query: 285 GLASPFL 291 + + L Sbjct: 403 VIGTAEL 409 >gi|254451748|ref|ZP_05065185.1| glutamate synthase large subunit [Octadecabacter antarcticus 238] gi|198266154|gb|EDY90424.1| glutamate synthase large subunit [Octadecabacter antarcticus 238] Length = 425 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K V D+ L +K+G + G +G Sbjct: 182 RHPDWTGPDDLEIKILELREITGWKVPIYVK-VAGARPYYDVTLAIKAGADAVVLDGMQG 240 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q I SGG+R+G Sbjct: 241 GT-----------AATQDVFIEHVGQPTLAIIRPAVQALQDLGMHRKVQLILSGGIRSGA 289 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + S L D+ A +L Sbjct: 290 DVAKAMALGADAVSIGSAALIALGDNDPKYEAEYNAL 326 >gi|319789973|ref|YP_004151606.1| Glutamate synthase (NADPH) [Thermovibrio ammonificans HB-1] gi|317114475|gb|ADU96965.1| Glutamate synthase (NADPH) [Thermovibrio ammonificans HB-1] Length = 505 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 101/275 (36%), Gaps = 48/275 (17%) Query: 38 EISFDEVDPSVEFLGKKLSF--PLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMA 91 + D V + GK+L P+L S+M+ G+ IN NL A AA++ Sbjct: 151 QFDEDGVSIKTKI-GKQLELEIPVLFSAMSYGS------INLNLQKAMARAAKEFGTLWN 203 Query: 92 VGSQRVM-----FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ------KAHQA 140 G + F D ++ R + + N A+++ G + + Sbjct: 204 TGEGGLHKSLKEFKDCTIVQVASGR-FGVDLEYLENSAAIEIKIGQGAKPGIGGHLPGEK 262 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTN---FADLSSKIALLSSAMDV--PLLLKEVGCGL 195 V+ A+ + + + I P + + DL I L A + P+ +K Sbjct: 263 VNEGIAETRMIPV--GSDAISPAPHHDIYSIEDLRQLIYALKEATNYEKPVFVKIAAVHN 320 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--- 252 + +G I G G + + +S RD GIP L++ Sbjct: 321 VAAIACGIAHAGADAIAIDGVRGGTGATPKSLRDH----------VGIPIELAIAAVDDR 370 Query: 253 ---RPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 NE IA+GG R+ VD+LK+I LGA Sbjct: 371 LRKEGLRNEVSLIAAGGFRSAVDVLKAIALGADAV 405 >gi|307353871|ref|YP_003894922.1| glutamate synthase [Methanoplanus petrolearius DSM 11571] gi|307157104|gb|ADN36484.1| Glutamate synthase (NADPH) [Methanoplanus petrolearius DSM 11571] Length = 495 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 103/327 (31%), Gaps = 64/327 (19%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQRVMFSDHNAI 105 + P+ ++ M+ G +I AA +T + G + R +F Sbjct: 168 IETPIYVTHMSFGALSREMKIALAKGSAAVRTAIGSGEGGILEDERKEAYRYIFEYVPNR 227 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 S + + +G G A + + A +II P Sbjct: 228 YSVSVENLRSADAIEIKIGQSTKPGMGGELPAEKVTEEIAA---IRGFPQGTDIISPASF 284 Query: 166 TNFAD---LSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTS 220 + + L K+ L P+ +K + + D+++ + + + I GR GGT Sbjct: 285 GDIRNRDDLREKVDWLRETSGGRPVGIKIAAGNIEA-DMKVAVYANPDFITIDGRPGGTG 343 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGLRNGVDILK 275 + + I+ +PT +L AR Y + + + +GGLR D K Sbjct: 344 AADV-----------IIKDATSVPTIFALHRARRYLDENGRGDISLVITGGLRLASDFAK 392 Query: 276 SIILGASLGGLASPFLKPA------------------------------MDSSDAVVAAI 305 +I +GA + + L A S+ + + Sbjct: 393 AIAMGADAVAIGTAALMAAACQQYRVCNTGECPVGVTTQNPDLRKRLKIEISAKKLENFL 452 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTA 332 + +E L G + +L + Sbjct: 453 KVSTEELKDFARLTGNNDIHDLSIEDL 479 >gi|149917967|ref|ZP_01906461.1| ferredoxin-dependent glutamate synthase [Plesiocystis pacifica SIR-1] gi|149821233|gb|EDM80637.1| ferredoxin-dependent glutamate synthase [Plesiocystis pacifica SIR-1] Length = 540 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 103/284 (36%), Gaps = 45/284 (15%) Query: 37 PEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA 91 P++ D V + L+ P+ +S M+ G ++ LA AE + Sbjct: 185 PKLDHDPVGTEIVIGPNAAKPLTLAIPIFVSDMSFGALSEEAKV--ALAKGAEGAGTGIC 242 Query: 92 VG-----------SQRVMFSDHNAIKSFELRQYAP------HTVLISNLGAVQLNYDFGV 134 G + R + +A + + + + G V Sbjct: 243 SGEGGMLPEEQAANSRYFYELASAKFGWSIDKVKQVQAFHFKAGQGAKTGTGGHLPGEKV 302 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + V L + + ++ P +F ++ ++ +S +P+ K Sbjct: 303 KGKIAKVRELAEGTPAISPSTFSDLDTPA---DFQRVADEVREVSG--GIPIGFKLSAQH 357 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + + D++ L + Y + GRGG + + E ++ + +PT ++L AR Sbjct: 358 IEA-DVDFALAASADYIILDGRGGGTGAAPEVFKN----------NISVPTMIALARARR 406 Query: 255 YCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + + + I +GGLR D +K++ LGA +++ ++ Sbjct: 407 HLDARGRRDVTLIITGGLRTESDFVKAMALGADAVAVSNAAMQA 450 >gi|328952749|ref|YP_004370083.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] gi|328453073|gb|AEB08902.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] Length = 519 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 107/370 (28%), Gaps = 69/370 (18%) Query: 25 FFDDWHLI-HRALPEISFDEVDPSVEF-LGK--------KLSFPLLISSMTGGNNKMIER 74 FD I R + + S+E L + KLS P M+ G+ + Sbjct: 141 GFDKMRFIFPREFKDSKLSHEEISLELVLNRRADGRPQVKLSVPWYGGGMSFGSISLHTM 200 Query: 75 INRNLAIAA-------EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ 127 + R A+ + A+ A F +R+ V I Q Sbjct: 201 LARARAVVKWNTMTCTGEGGYPDALMPYDDHIITQVATGLFGVREDTIQRVRIVEFKYAQ 260 Query: 128 ---------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 L D + + + LF P + + D ++ Sbjct: 261 GAKPGLGGHLLGDKVTPEVARMREAVTGSALFSPF-PFHSVYSVEDHKKHVDWIKEVNPR 319 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIV 237 + +K M +G + G GGT + + +++ I Sbjct: 320 CL-----VSVKVSTPTDVDMVAVGSYDAGAHIIHLDGSYGGTGAAPDIAKKNIAMPI--- 371 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG------------- 284 ++ IP + IASGGLR D+ K+I LGA Sbjct: 372 --EYAIPKVHQFLRNEGIRDRITLIASGGLRTAFDVAKAIALGADGVVIGTAEMVALECT 429 Query: 285 -------------GLAS--PFLKPAMD---SSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 G+A+ P + M + + + + + LG + + E Sbjct: 430 RCYNCESGRGCPRGIATTDPEMTQLMQVDWGLNRISNMYHAWAWQLKEILRRLGLRSITE 489 Query: 327 LYLNTALIRH 336 L T L+ H Sbjct: 490 LVGRTDLLVH 499 >gi|21221662|ref|NP_627441.1| glycolate oxidase [Streptomyces coelicolor A3(2)] gi|4481936|emb|CAB38520.1| putative glycolate oxidase [Streptomyces coelicolor A3(2)] Length = 377 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 114/341 (33%), Gaps = 65/341 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNK 70 ++ + N+ F L RALP I +E D SVE LG + P+ I+ + G + Sbjct: 30 AGRERTLAANEAVFGAVRLRPRALPGI--EEPDTSVEVLGSRWPAPVGIAPVAYHGLAHP 87 Query: 71 MIERI------------------NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 E R+L A + + Q F DH R+ Sbjct: 88 DGEPATAAAAGALGLPLVVSTFAGRSLEEVARAASAPLWL--QLYCFRDHETTLGLA-RR 144 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 A+ L D + + + H+ P + Sbjct: 145 ARDSGYQ-----ALVLTVDTPF-TGRRLRDLRNGFAVPAHITPANLTGTAAAGSATPGAH 198 Query: 173 SKIA-----------LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 S++A L +A +P+L K V L++ D E + +G+ ++ GG Sbjct: 199 SRLAFDRRLDWSFVARLGAASGLPVLAKGV---LTAPDAEAAVAAGVAGIVVSNHGGRQL 255 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T +L E+ + GG+R G D+L ++ LG Sbjct: 256 DGAPA------------------TLEALPEVVSAVRGRCPVLLDGGVRTGADVLAALALG 297 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 A + P L A+ + V + L ++F +M L G Sbjct: 298 ARAVLVGRPALYALAVGGASGVRRMLTLLTEDFADTMVLTG 338 >gi|254512798|ref|ZP_05124864.1| ferredoxin-dependent glutamate synthase [Rhodobacteraceae bacterium KLH11] gi|221532797|gb|EEE35792.1| ferredoxin-dependent glutamate synthase [Rhodobacteraceae bacterium KLH11] Length = 536 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 105/295 (35%), Gaps = 42/295 (14%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERINR 77 +DD ++ L P + D V V L PL +S M+ G ++ Sbjct: 169 WDDIQILAAQLAKQPLLDEDAVGTEVVIGPNAKKPLTLKIPLFVSDMSFGALSEPAKV-- 226 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH--TVLISNLGAVQLNYDFGVQ 135 LA AE + G + M D S + A L VQ + G Q Sbjct: 227 ALATGAEMAGTGICSG-EGGMLPDEQEANSRYFYELASARFGFSWDKLDRVQAFHFKGGQ 285 Query: 136 KAHQAV-------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-----D 183 A V G L P + P + ++ S+I + + Sbjct: 286 GAKTGTGGHLPGPKVKGKIAKVRELEPGTPAVSPPRFPEWTEV-SQIRDFADEVRERTGG 344 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +P+ K + DI+ L G+ Y + GRGG + + RD + + Sbjct: 345 IPIGYKLSAQHIEK-DIDAALDVGVDYIILDGRGGGTGAAPIIFRD----------NISV 393 Query: 244 PTPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 PT +L AR + + + + +GGLR D +K++ LGA +++ ++ Sbjct: 394 PTIPALARARMHLDRIGRKDITLVITGGLRKPGDFVKAMALGADAIAVSNSAMQA 448 >gi|114769456|ref|ZP_01447082.1| glutamate synthase family protein [alpha proteobacterium HTCC2255] gi|114550373|gb|EAU53254.1| glutamate synthase family protein [alpha proteobacterium HTCC2255] Length = 448 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K V D+ L +K+G + G +G Sbjct: 205 RHPDWTGPDDLEIKILELREITGWRVPIYVK-VAGARPYYDVTLAVKAGADAVVLDGMQG 263 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q I SGG+R+G Sbjct: 264 GT-----------AATQDVFIEHVGQPTLAIIRPAVQALQDLGMHRKVQLILSGGIRSGA 312 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + S L Sbjct: 313 DVAKAMALGADAVAIGSAALIAL 335 >gi|239625348|ref|ZP_04668379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519578|gb|EEQ59444.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 468 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 112/285 (39%), Gaps = 47/285 (16%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD + L + DE V +GK L P+ IS M+ G + Sbjct: 104 GWDDILFLGAQLNPMPLDEHAPVKTET-IIGKHARKPMVLEHPVYISHMSFGALSKETK- 161 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-----NLGAVQLNY 130 LA + + AM G ++ + A + + +Y P+ ++ N A+++ Sbjct: 162 -TALAKGSAMVRTAMCSGEGGILPEEREAAYRY-IFEYVPNLYSVTEENLKNADAIEIKI 219 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLSSK--IALLSSAM-- 182 G + H + + + PL Q++I P+ F + ++ + L + Sbjct: 220 GQGTKPGMGGHLPGKKVTPEIAAVRNKPLGQDVISPSR---FPGIDTREDLKALVEKLRE 276 Query: 183 ---DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 P+ +K + G D+E + +G + I GRGG + + + RD S Sbjct: 277 ESDGRPIGIK-IAAGRIERDLEYCVFAGPDFITIDGRGGATGASPKLIRDATS------- 328 Query: 240 DWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILG 280 +PT +L AR Y + + + +GGLR D K++ +G Sbjct: 329 ---VPTIYALYRARKYLDEAGADIDLVITGGLRVSSDFAKALAMG 370 >gi|194477219|ref|YP_002049398.1| inositol-5-monophosphate dehydrogenase [Paulinella chromatophora] gi|171192226|gb|ACB43188.1| inositol-5-monophosphate dehydrogenase [Paulinella chromatophora] Length = 387 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 54/379 (14%), Positives = 102/379 (26%), Gaps = 97/379 (25%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------------------ 66 D+ L+ I D VD S G P++ S+M G Sbjct: 16 GIDEIALVPSGRT-IDPDIVDSSWNLGGIHREVPIIASAMDGVVDVRVAVELSRLGALGV 74 Query: 67 ----GNNKMIERINRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 G E N +L + V + + + +R+ + Sbjct: 75 LNLEGIQTRYEDPNPSLERITSVGNEEFVPLMQEIYQEPIKKSLIQQ--RIREIKNQGGI 132 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS-KIALL 178 + G F + GAD F+ Q + + + + I L Sbjct: 133 AAVSGTPMAAMKF-----RDIIMKAGADLFFV-----QATVVSTDHIGRDGVDTLNIETL 182 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 + +P+++ G ++ + +G + G + + Sbjct: 183 CKDIGIPVII---GNCVTYEVALKLMYAGAAGIMVGIGPGAACT------------SRGV 227 Query: 239 QDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P ++ + IA GG+ G DI K I GA + SP Sbjct: 228 LGIGVPQATAISDCASARDHYYEESGNYVSVIADGGIVTGGDICKCIACGADAVMIGSPI 287 Query: 291 -----------------------------------LKPAMDSSDAVVAAIESLRKEFIVS 315 LK + ++ ++ S Sbjct: 288 ARATEAPGRGFHWGMATPSLVLPRGTRIKVGTVGSLKKIVRGPASLDDGSQNFLGALRTS 347 Query: 316 MFLLGTKRVQELYLNTALI 334 M LG + ++E+ +I Sbjct: 348 MGTLGVRSIKEMQSVEVVI 366 >gi|3687684|gb|AAC62222.1| glutamate synthase large subunit-like protein [Sinorhizobium meliloti] Length = 442 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 24/140 (17%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITDWEKPIYVK-VGGARPYYDTALAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+PT + A + Q + SGG+R+G Sbjct: 260 GT-----------AATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLVVSGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFL 291 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADAVVIGTAAL 328 >gi|333030145|ref|ZP_08458206.1| dihydroorotate oxidase [Bacteroides coprosuis DSM 18011] gi|332740742|gb|EGJ71224.1| dihydroorotate oxidase [Bacteroides coprosuis DSM 18011] Length = 327 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 109/299 (36%), Gaps = 43/299 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM----A 91 D F G L P+++SS G + E+ N+ LA A + ++ + Sbjct: 3 DLKTTFAGLTLRNPIIVSSS--GLSNTAEK-NQKLAEAGAGAIVLKSLFEEQILIETDQM 59 Query: 92 VGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAV--------QLNYDFGVQKAHQA-- 140 + + ++ + + + + LI + AV +N + A Sbjct: 60 MSDASAYSEGADYLQEYVRHHKLSEYLSLIKDSKAVCNEVPIIASINCYSDSEWIDFAKQ 119 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 + GAD + +++ LQ ++ + + + + + +P+++K + + Sbjct: 120 IEAAGADAIEINILALQSNVKYQYGSFEQRHIDILKHIKNTVKIPIIMKLGHNFTNPIVL 179 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLE-------SDIGIVFQDWGIPTPLSLEMA 252 IE +G + R IE + + S++ + GI A Sbjct: 180 IEQLYANGADAIVLFNRFYQPDIDIEKMKHVAGPVLSHPSELSNALRWIGI--------A 231 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 + + ASGG+ N DI+K+I+ GA+ + S K + ++ + + + Sbjct: 232 SSEVEKIDYAASGGVHNPEDIIKTILAGATAVEICSVLYKKSDSEIRKMLTFLATWMNQ 290 >gi|163734634|ref|ZP_02142073.1| glutamate synthase family protein, putative [Roseobacter litoralis Och 149] gi|161392127|gb|EDQ16457.1| glutamate synthase family protein, putative [Roseobacter litoralis Och 149] Length = 447 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKILELREITNWEKPIYIK-IGGARPYFDTTLAIKAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G P + A + Q I SGG+R G Sbjct: 263 GT-----------AATQDVFIENVGQPILACIREAVRALQDLDMHREVQLIVSGGIRTGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A +L Sbjct: 312 DVAKAMALGADAVAIGTAALIALGDNDPKWEAEYNAL 348 >gi|225558226|gb|EEH06510.1| L-lactate dehydrogenase [Ajellomyces capsulatus G186AR] Length = 196 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 20/128 (15%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + A L S ++ ++LK + +++ D L + G ++ G + S ++ Sbjct: 80 ERCAQLCSRTNLKIILKGI---MTAEDTLLAIGHGADAIIVSNNEGRQLDSVPSRIEVLP 136 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I I G+ G D+ K++ LGA + L Sbjct: 137 EI-----------------VSAVRGRVPVIIDSGITRGSDVFKALALGADFTLVDRSALW 179 Query: 293 PAMDSSDA 300 Sbjct: 180 GLNFGGQE 187 >gi|123966385|ref|YP_001011466.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9515] gi|123200751|gb|ABM72359.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9515] Length = 433 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 61/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L ++ VP++ G ++ EL +KSG+ + G + + Sbjct: 224 NIKSLCQSLKVPVVA---GNCVTYEVAELLMKSGVAGLMVGIGPGAACT----------- 269 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ ++ IA GG+ G DI K I GA Sbjct: 270 -SRGVLGIGIPQATAISDCSSARDDYFQETGRYVPIIADGGIVTGGDICKCIACGADAVM 328 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 329 IGSPIAKSTSAPGNGFHWGMATPSPILPRGTRIEVGSTGSLERILKGPAILDDGTHNLLG 388 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 389 AIRTSMSTLGAKNIKEMQNVDIVI 412 >gi|332297326|ref|YP_004439248.1| Glutamate synthase (NADPH) [Treponema brennaborense DSM 12168] gi|332180429|gb|AEE16117.1| Glutamate synthase (NADPH) [Treponema brennaborense DSM 12168] Length = 501 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 103/333 (30%), Gaps = 63/333 (18%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS-------QRVMFSDHNAIK 106 LS P++ S+M+ G+ +LA AA + + G R + + Sbjct: 164 DLSVPIMFSAMSYGSISYNAH--ESLARAATELGICYNTGEGGLHQDFYRYGPNTIVQVA 221 Query: 107 S--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 S F + + + Q G+ ++G + + I P Sbjct: 222 SGRFGVHKKYLEAGAAVEIKMGQ-GAKPGIGGHLPGAKIVGDVSATRMIPEGSDAISPAP 280 Query: 165 NTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + L+ ++A P+++K + +SG I G G Sbjct: 281 HHDIYSIEDLRQLIYSLKEATAYKKPVIVKIAAVHNVAAIASGVARSGADIIAIDGFRGG 340 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF------IASGGLRNGVDI 273 + + RD + GIP L+L E + G +R+ D+ Sbjct: 341 TGAAPTRIRD----------NVGIPIELALAAVDERLREEGIRGSVSVVVGGSIRSSADV 390 Query: 274 LKSIILGASLGGLASPFLKPA------------------------------MDSSDAVVA 303 +K+I LGA +A+ L S +V Sbjct: 391 VKAIALGADAVYIATSALLALGCHLCRSCHSGKCNWGIATQRPDLVKRLNPDVGSQRLVN 450 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 I + E M +G ++ L N ++R Sbjct: 451 LITAWTHEIKEMMGGMGINSIEALKGNRLMLRG 483 >gi|76802180|ref|YP_327188.1| IMP dehydrogenase 2; GMP reductase [Natronomonas pharaonis DSM 2160] gi|76558045|emb|CAI49631.1| IMP dehydrogenase 2; GMP reductase [Natronomonas pharaonis DSM 2160] Length = 345 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 87/275 (31%), Gaps = 45/275 (16%) Query: 20 DRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRN 78 +R +DD L+ + P S D V+ + G LS P+ ++M + + Sbjct: 3 ERTGLSYDDVLLVPQRSPVDSRDNVELTTTLADGLTLSLPVTTAAM--------DTVTE- 53 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT-VLISNLGAVQLNYDFGVQKA 137 A A A +G ++ + A + + +G + + + Sbjct: 54 -AEMARAVGEAGGLGVLHRFL--PAEEQAAMVASVADDGVPVAAAVGIAEPHTERAAALV 110 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 V +L D H+ A L+SA L G + Sbjct: 111 EAGVDMLVVDVAHGHM---------------ERTLDVTAELASAFPETALC--AGNVATP 153 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMARPY 255 + ++G + G+ + E +G+P T + Sbjct: 154 DGVADLAEAGADCVKVGVGPGSHCTTRE------------VTGFGVPQFTAVDRCADAAS 201 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + IA GG+++ D +KS++ GA + F Sbjct: 202 AADVTVIADGGIQSSGDAVKSLLAGADAVMMGGYF 236 >gi|91772169|ref|YP_564861.1| glutamate synthase (NADPH) GltB2 subunit [Methanococcoides burtonii DSM 6242] gi|91711184|gb|ABE51111.1| Protein with rubredoxin and glutamine synthase domains [Methanococcoides burtonii DSM 6242] Length = 496 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 99/272 (36%), Gaps = 35/272 (12%) Query: 44 VDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 V+ + + P+ I+ M+ G + + + + L+ + + AM G ++ Sbjct: 153 VNTTTTIGPHAKYPLVIETPVFITHMSFGA--LSKEVKQALSKGSAAVRTAMCSGEGGIL 210 Query: 99 FSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGVQKA------HQAVHVLGADGLFL 151 + + ++V NL V Q A H + ++ + Sbjct: 211 KENMETAYKYIFEYVPNKYSVTEENLKKVDAIEIKIGQSAKPGMGGHLPAEKVTSELAEI 270 Query: 152 HLNPLQ-EIIQPNGNTNFAD---LSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKS 206 P +I+ P + + L K+ L P+ +K + + D+E+ + + Sbjct: 271 RGFPESTDIVSPANFDDIRNKDDLKKKVEWLRETSGGKPIGIKIAAGNIEA-DLEVAIYA 329 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQF 261 + I GR G + + ++ ++ S IPT +L AR Y + + Sbjct: 330 KPDFITIDGRPGATAAALKFVKNSTS----------IPTIFALWRARRYLDEKGIKDISL 379 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP 293 I +GG R D K++ LGA + + L Sbjct: 380 IITGGFRISPDYAKALALGADAIAIGTAALMA 411 >gi|85702852|ref|ZP_01033956.1| glutamate synthase family protein [Roseovarius sp. 217] gi|85671780|gb|EAQ26637.1| glutamate synthase family protein [Roseovarius sp. 217] Length = 447 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ L +A VP+ +K +G D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKLLELREITAWKVPIYIK-IGGARPYFDTTLAVKAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G P + A + Q I SGG+R G Sbjct: 263 GT-----------AATQDVFIEHVGQPILACIREAVRALQDLGMHRQVQLIVSGGIRTGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K + LGA + + L D+ A L Sbjct: 312 DVAKCMALGADAVAIGTAALIALGDNDPKWEAEYNKL 348 >gi|298675376|ref|YP_003727126.1| glutamate synthase [Methanohalobium evestigatum Z-7303] gi|298288364|gb|ADI74330.1| Glutamate synthase (NADPH) [Methanohalobium evestigatum Z-7303] Length = 503 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 109/347 (31%), Gaps = 68/347 (19%) Query: 43 EVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------- 94 E++ + E + KL P++ ++M+ G + + LA+AA K+ M G Sbjct: 152 EIELATELQPQVKLDVPVVFAAMSYGAVSLNTH--KALALAARKSGTLMNTGEGGLHEDL 209 Query: 95 --QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGAD 147 A F + +T + + Q + +K + + Sbjct: 210 YRYSDNIMVQVASGRFGVHNEYLNTCSMIEIKIGQGAKPGIGGHLPGEKVGE--DISKTR 267 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLK 205 + L + L + + DLS I L A + P+ +K + ++ Sbjct: 268 MIPLGTDVLSPAPHHDI-YSIEDLSQLIYALKEATNYEKPVGVKISAVHNVAAIASGVVR 326 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEA 259 +G I G G S + RD + GIP L+L N A Sbjct: 327 AGADVLTIDGYRGGSGASPMVIRD----------NVGIPIELALATVDQRLRDEGIRNRA 376 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP------------------AMDSSD-- 299 + +G +R+ D+ K++ LGA + + L A + Sbjct: 377 SILCAGSIRSSADVAKAVALGADAVVIGTAALIAMGCSVCQRCYTGNCAWGIATQKPELV 436 Query: 300 ----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + E + LG ++ L N +R Sbjct: 437 NRLDPEIAAQKLTNLLSGWSFELKEILGSLGVNSIESLRGNRERLRG 483 >gi|332976468|gb|EGK13314.1| ferredoxin-dependent glutamate synthase peptide [Desmospora sp. 8437] Length = 457 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 121/343 (35%), Gaps = 89/343 (25%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--EL 110 +L PLL+S M G +E+ KVA+A GS + + F E Sbjct: 125 LELEIPLLVSGMAFGLG------------ISEQLKVALAKGSAMAGTATNGGEGPFLPEE 172 Query: 111 RQYA---------------PHTVLISNLGAVQLNYDFGVQKAHQ--AVHVLGADGLFLHL 153 R+YA P + +++ V + Q A+H+ G + L Sbjct: 173 RKYADKLILQYSRAKWAKDPEILKQADMIEVHIGQGASAGTPSQVPAIHLKGRAMELMGL 232 Query: 154 NPLQ--EII--QPNGNT--NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 P EI+ P + ++ L ++ L+ VP+ +K + G D+E+ + +G Sbjct: 233 KPDDTAEILSRMPGIHRKQDWKKLIDRLRQLTG--GVPIGMKMIP-GCVEKDLEIAVAAG 289 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQ 260 + + + G GT + I+ D+G+P + L + +E Sbjct: 290 VDFITLDGAQAGTKGTPP-----------ILQDDFGLPAVIGLARAADYLEKKKKKDEIS 338 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------------------------- 294 I SGGL D +K++ +GA L S L A Sbjct: 339 LIISGGLYTPGDFMKALAMGADAVALGSAVLFAASHDQGSQKTLPWEPPTQLVLYDGDQK 398 Query: 295 -----MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + V ++S E ++ LG R+Q++ Sbjct: 399 EELNVDEGAKCVAHYLQSSVAEMKLAAIALGKSRLQDVDRTDL 441 >gi|159903669|ref|YP_001551013.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9211] gi|159888845|gb|ABX09059.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9211] Length = 387 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 111/395 (28%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 NI R D+ L+ PEI+ D S++ GK L P++ S+M G Sbjct: 2 NIQLGHSKFVRRAYGIDEIALVPGGRTVDPEIT----DTSLKLGGKTLEVPIIASAMDGV 57 Query: 67 ---------GNNKMIERIN---------------RNLAIAAEKTKVAMAVGSQRVMFSDH 102 + + +N + + ++ V + Sbjct: 58 VDVEMATALSSIGALGVLNLEGIQTRYENPKEVIKKITSVGKEDFVPLMQDIYSQPIQKD 117 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 + +++ + + Q F + + E I P Sbjct: 118 LIVH--RIKEIKSKGAIAAVSATPQAAIKFKETILEAKTDLFFLQATVVST----EHIGP 171 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + ++ L M++P+L VG ++ +++G + + G + + Sbjct: 172 PDRESL-----DLSKLCKTMNIPVL---VGNCVTYEVALKLMRAGAKGILVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 G P ++ + IA GG+ G DI Sbjct: 224 ------------SRGVLGIGTPQATAIADCSSAREDYKKETGEYVPIIADGGIVTGGDIC 271 Query: 275 KSIILGASLG-------------------GLASP----------------FLKPAMDSSD 299 K I GA G+A+P L+ + Sbjct: 272 KCIACGADGVMIGSPIARAQEAPGQGFHWGMATPSPVLPRGTRIKVGSTGTLERIIKGPA 331 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + ++L SM LG + ++E+ +I Sbjct: 332 VIDDGTQNLLGALKTSMGTLGARTIKEMQEVEVVI 366 >gi|121609975|ref|YP_997782.1| ferredoxin-dependent glutamate synthase [Verminephrobacter eiseniae EF01-2] gi|121554615|gb|ABM58764.1| ferredoxin-dependent glutamate synthase [Verminephrobacter eiseniae EF01-2] Length = 446 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K +G D+ L +K+G + G G Sbjct: 208 RHPDWTGPDDLEIKIHELREITDWEKPIYVK-LGATRPYYDVALAVKAGADVVVLDGMQG 266 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 267 GTAATQEVFIEH----------VGIPILAAIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 316 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ L Sbjct: 317 VAKALALGADAVAIGTAALVALGDNDPRYEEEYRQL 352 >gi|193211887|ref|YP_001997840.1| ferredoxin-dependent glutamate synthase [Chlorobaculum parvum NCIB 8327] gi|193085364|gb|ACF10640.1| ferredoxin-dependent glutamate synthase [Chlorobaculum parvum NCIB 8327] Length = 545 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 92/260 (35%), Gaps = 32/260 (12%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L PLL++ M+ G +I LA AE + G + M A S + Sbjct: 211 LRLEIPLLVTDMSYGALSREVKI--ALARGAELAGTGICSG-EGGMLEAERAENSRYFYE 267 Query: 113 YAPH--TVLISNLGAVQL-------NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP- 162 AP I + Q GV A V L P ++ P Sbjct: 268 LAPAEFGFDIEQVKRCQAFHFKAGQAAKTGVGGLLPADKVTEEIARVRGLEPHRDAHAPS 327 Query: 163 --NGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + + + + A +P+ K + + D++ +++ Y + GRGG Sbjct: 328 HFRNLRTPEEFAERAERIREATGGIPVGFKLSAQHIEA-DLDFAIEACADYVILDGRGGG 386 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR-----PYCNEAQFIASGGLRNGVDIL 274 + + ++ + +PT +L AR N + +GGLR D + Sbjct: 387 TGASP----------NLLKNNISVPTIPALARARRHLDNSAANHISLVITGGLRTESDFI 436 Query: 275 KSIILGASLGGLASPFLKPA 294 K++ LGA L + ++ A Sbjct: 437 KALALGADAVALGNAAIQAA 456 >gi|46204146|ref|ZP_00050434.2| COG0069: Glutamate synthase domain 2 [Magnetospirillum magnetotacticum MS-1] Length = 401 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +KSG + G +G Sbjct: 129 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAVKSGADVVVLDGMQG 187 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q I SGG+R+G Sbjct: 188 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGMHRKVQLIVSGGIRSGA 236 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 237 DVAKALALGADAVAIGTAALIAL 259 >gi|297154361|gb|ADI04073.1| ferredoxin-dependent glutamate synthase [Streptomyces bingchenggensis BCW-1] Length = 446 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 15/138 (10%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K + + ++G + G GGT W+ + G+ Sbjct: 287 RIWVKLHPGRDVAQAATVAWRAGADAVTVDGAEGGTGWAPLA-----------FLDGVGL 335 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVV 302 P L R +ASG + G +K+I LGA+ GL L + ++ + Sbjct: 336 PLVECLH--RIGSPAGDLLASGRMWEGSRAVKAIALGATAVGLGRAALLAVDEDTESGLE 393 Query: 303 AAIESLRKEFIVSMFLLG 320 + L E + + LG Sbjct: 394 RFVACLALELRLLIGALG 411 >gi|46580233|ref|YP_011041.1| glutamate synthase, iron-sulfur cluster-binding subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120602382|ref|YP_966782.1| glutamate synthase (NADPH) [Desulfovibrio vulgaris DP4] gi|46449650|gb|AAS96300.1| glutamate synthase, iron-sulfur cluster-binding subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562611|gb|ABM28355.1| glutamate synthase (NADPH) GltB2 subunit [Desulfovibrio vulgaris DP4] gi|311233781|gb|ADP86635.1| Glutamate synthase (NADPH) [Desulfovibrio vulgaris RCH1] Length = 507 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 106/341 (31%), Gaps = 81/341 (23%) Query: 55 LSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFS-DHNAIKS-- 107 L +P++ ++M+ G IN NL A AA + G + + Sbjct: 171 LEYPIMFAAMSFGA------INYNLHEAMAKAATELGTFYNTGEGGLHPDLYPYGANTIV 224 Query: 108 ------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + + + + Q + +K + V + Sbjct: 225 QVASGRFGVHKDYLNAGSAVEIKVGQGAKPGIGGHLPGEKIDEEVSRTRM------VPKG 278 Query: 157 QEIIQPNGNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + I P + + + + L+ + VP+ +K + +++G Sbjct: 279 SDAISPAPHHDIYSIEDLLQLICAIKEATQYRVPVSVKIAAVHNAPAIASGIVRAGADIV 338 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASG 265 I G G + + RD + GIP L+L N A +A+G Sbjct: 339 VIDGFRGGTGAAPTMIRD----------NVGIPIELALAAVDDRLRDEGIRNRASIVAAG 388 Query: 266 GLRNGVDILKSIILGASLG--GLASPF-------------------------LKPAMDSS 298 G+R D++K+I LGA G A+ LK + Sbjct: 389 GVRCSADVVKAIALGADAVYIGTAALIAVGCTLCGRCYTGKCPWGIATNESRLKKRQNPD 448 Query: 299 DA---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +A + + + E + +G ++ L N +R Sbjct: 449 EAARRLTNLVRAWGHEIQEMLGGMGLNSIESLRGNRDKLRG 489 >gi|152966925|ref|YP_001362709.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kineococcus radiotolerans SRS30216] gi|151361442|gb|ABS04445.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Kineococcus radiotolerans SRS30216] Length = 354 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 105/311 (33%), Gaps = 39/311 (12%) Query: 45 DPSVEFLGKKLSFPLLISSMT---GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 + E LG ++ P+L++ M G + R A A V+ G++ + Sbjct: 60 STATEVLGTPVAAPVLVAPMAQQVGARPEGEVLTARGAAKAGTLLGVSTNTGARFADIAA 119 Query: 102 HNAIKSFEL----RQYAPHTVLISNLGAVQLNYDFGVQK--AHQAVHVLGAD--GLFLHL 153 A +++ + A ++ A V + V + Sbjct: 120 EGAPWWYQVYVARNRDATRILVERAAAAEAKALILTVDTTPLGREVPAIDPRNWPAGPRK 179 Query: 154 NPLQEIIQPNGNTNFADLS-------SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 N + + + +D I L+ +P+L K V L++ D + + Sbjct: 180 NRTANLTEAELDRFGSDTDMALDLTPDTIGWLADVSGLPVLCKGV---LTARDARRCVDA 236 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G ++ GG R L + + F +P E+ +E + G Sbjct: 237 GAEGIIVSTHGG---------RRLGTSVTSAFA---LP-----EILAEVGSEVEVHVDSG 279 Query: 267 LRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G +I LGA + P A D +D V + + + E + ++ LG ++ Sbjct: 280 IRGGAQAAAAIALGAKAVHVGRPVMWGLAADGADGVATVLGNYQAELVTTLRQLGIGSIR 339 Query: 326 ELYLNTALIRH 336 +L + R Sbjct: 340 DLGPADVVARG 350 >gi|256787145|ref|ZP_05525576.1| glycolate oxidase [Streptomyces lividans TK24] gi|289771042|ref|ZP_06530420.1| glycolate oxidase [Streptomyces lividans TK24] gi|289701241|gb|EFD68670.1| glycolate oxidase [Streptomyces lividans TK24] Length = 430 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 114/341 (33%), Gaps = 65/341 (19%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT--GGNNK 70 ++ + N+ F L RALP I +E D SVE LG + P+ I+ + G + Sbjct: 83 AGRERTLAANEAVFGAVRLRPRALPGI--EEPDTSVEVLGSRWPAPVGIAPVAYHGLAHP 140 Query: 71 MIERI------------------NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 E R+L A + + Q F DH R+ Sbjct: 141 DGEPATAAAAGALGLPLVVSTFAGRSLEEVAHAASAPLWL--QLYCFRDHETTLGLA-RR 197 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 A+ L D + + + H+ P + Sbjct: 198 ARDSGYQ-----ALVLTVDTPF-TGRRLRDLRNGFAVPAHIIPANLTGTAAAGSATPGAH 251 Query: 173 SKI-----------ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 S++ A L +A +P+L K V L++ D E + +G+ ++ GG Sbjct: 252 SRLAFDRRLDWSFVARLGAASGLPVLAKGV---LTAPDAEAAVAAGVAGIVVSNHGGRQL 308 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + T +L E+ + GG+R G D+L ++ LG Sbjct: 309 DGAPA------------------TLEALPEVVSAVRGRCPVLLDGGVRTGADVLAALALG 350 Query: 281 ASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLG 320 A + P L A+ + V + L ++F +M L G Sbjct: 351 ARAVLVGRPALYALAVGGAAGVRRMLTLLTEDFADTMVLTG 391 >gi|289578467|ref|YP_003477094.1| glutamate synthase (NADPH) [Thermoanaerobacter italicus Ab9] gi|289528180|gb|ADD02532.1| Glutamate synthase (NADPH) [Thermoanaerobacter italicus Ab9] Length = 501 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 51/225 (22%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A + P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYALKEATNYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQF 261 Y + G G + + + RD + GIP ++ + Sbjct: 329 ADYIAMDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 +A+G +RN DI+K+I LGA +A+ L Sbjct: 379 VAAGSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 439 LNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|110681365|ref|YP_684372.1| glutamate synthase family protein, putative [Roseobacter denitrificans OCh 114] gi|109457481|gb|ABG33686.1| glutamate synthase family protein, putative [Roseobacter denitrificans OCh 114] Length = 446 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 99/300 (33%), Gaps = 44/300 (14%) Query: 18 GIDRNKKFFDDWHLIHRALPEISFD--------EVDPSVEFLGK--KLSFPLLISSMTGG 67 G R FDD + ++ + + V F K +L P+ I+ M+ G Sbjct: 43 GAKRRVPHFDDLLFLGASISRYALEGYREKCDTRVTLGTRFAKKPIELDIPVTIAGMSFG 102 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD--HNAIKSFEL----RQYAPHTVLIS 121 + L A + G + + H+ +++ P + Sbjct: 103 ALSGPAK--EALGRGASAAGTSTTTGDGGMTEEERGHSNKLVYQVLPSRYGMNPDDLRRC 160 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--NFADLSSKIALL- 178 + V + + +D + N Q I Q + ++ + Sbjct: 161 DAIEVVVGQGAKPGGGGMLLGQKISDRVASMRNLPQGIDQRSACRHPDWTGPDDLEIKIL 220 Query: 179 ----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESD 233 + + P+ +K VG D L +K+G + G +GGT + Sbjct: 221 ELREITGWEKPIYVK-VGGTRPYYDTTLAIKAGADVVVLDGMQGGT-----------AAT 268 Query: 234 IGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + G+PT + A + E Q + SGG+R G D+ K++ LGA + Sbjct: 269 QDVFIEHVGLPTLACIRPAVQALQDQGLHREVQLVVSGGIRTGADVAKALALGADAVAIG 328 >gi|149914668|ref|ZP_01903198.1| glutamate synthase family protein [Roseobacter sp. AzwK-3b] gi|149811461|gb|EDM71296.1| glutamate synthase family protein [Roseobacter sp. AzwK-3b] Length = 447 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKILELREITNWEKPIYIK-IGGARPYFDTTLAVKAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q I SGG+R+G Sbjct: 263 GT-----------AATQDVFIEHVGQPTLACIRDAVRALQDLNMHREVQLIVSGGIRSGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + + D+ A E L Sbjct: 312 DVAKALALGADAVSIGTAAMIAMGDNDPKWEAEYEKL 348 >gi|20807301|ref|NP_622472.1| glutamate synthase domain-containing 2 [Thermoanaerobacter tengcongensis MB4] gi|20515812|gb|AAM24076.1| Glutamate synthase domain 2 [Thermoanaerobacter tengcongensis MB4] Length = 501 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 73/225 (32%), Gaps = 51/225 (22%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 269 IPPGSDAISPAPHHDIYSIEDLAQLIYALKEATDYQKPVGVKIAAVNNVAAIASGIARAG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQF 261 Y I G G + + + RD + GIP ++ + Sbjct: 329 ADYIAIDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 +A+G +RN DI+K+I LGA + + L Sbjct: 379 VAAGSIRNSADIVKAIALGADAVYIGTAALIALGCHMCQKCYTGKCNWGIATQDPNLAKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 439 LNPEIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|300786629|ref|YP_003766920.1| ferredoxin-dependent glutamate synthase [Amycolatopsis mediterranei U32] gi|299796143|gb|ADJ46518.1| ferredoxin-dependent glutamate synthase [Amycolatopsis mediterranei U32] Length = 430 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 15/149 (10%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K +G + G GT W+ R + + + G Sbjct: 272 RVWVKLPPARDVRDAARCAWDAGADAVTVDGAEAGTGWAPTSFLRHVGLPLAECLRRIG- 330 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVV 302 P L + SG + GV + K + LGA+ GL L + + +V Sbjct: 331 PHAACLLV------------SGRMWEGVRVAKCLALGANAVGLGRAALIAVDEDPEDGLV 378 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNT 331 + L E + LG ++ L+ Sbjct: 379 RLVRCLALELRLVTSALGKYHTADVNLDD 407 >gi|302540028|ref|ZP_07292370.1| glutamate synthase [Streptomyces hygroscopicus ATCC 53653] gi|302457646|gb|EFL20739.1| glutamate synthase [Streptomyces himastatinicus ATCC 53653] Length = 439 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG + D++L + +G + G +G Sbjct: 199 RHPDWTGPDDLAIKILELREITDWEKPIYVK-VGATRTYYDVKLAVHAGADVVVVDGMQG 257 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT +L A E Q + SGG+R G Sbjct: 258 GT-----------AATQDVFVEHVGIPTLAALPQAVRALQELGVHREVQLVVSGGIRGGA 306 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 307 DMAKALALGADAVAIGTAALIAL 329 >gi|71084003|ref|YP_266723.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91762933|ref|ZP_01264898.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1002] gi|71063116|gb|AAZ22119.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91718735|gb|EAS85385.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 438 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 24/160 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 196 RHPDWTGPDDLEIKIQELREITNWEKPIYIK-VGAARPYYDTTLAVKAGADVVVLDGMQG 254 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT +L + E Q I SGG+R G Sbjct: 255 GT-----------AATQDVFIEHVGIPTLGALRESVDALKELNMHRKVQLIVSGGIRTGA 303 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 D+ K+I +GA + S + ++D E L E Sbjct: 304 DVAKAIAMGADAVSIGSAAMMALNCNADLYRKDYEKLGTE 343 >gi|238594363|ref|XP_002393463.1| hypothetical protein MPER_06798 [Moniliophthora perniciosa FA553] gi|215460972|gb|EEB94393.1| hypothetical protein MPER_06798 [Moniliophthora perniciosa FA553] Length = 214 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 D++K++ LGA+ G+ PFL + V I L +E +M LLG ++L Sbjct: 140 DVVKALCLGATAVGMGRPFLYAQSAYGEAGVSKIITILEREITTAMRLLGASSSKDLK 197 >gi|114328775|ref|YP_745932.1| glutamate synthase [Granulibacter bethesdensis CGDNIH1] gi|114316949|gb|ABI63009.1| glutamate synthase (NADPH) [Granulibacter bethesdensis CGDNIH1] Length = 448 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +K+G + G G Sbjct: 207 RHPDWTGPDDLEIKILELREITGWEKPIYVK-VGASRPYYDTALAVKAGADVVVLDGMQG 265 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + + G+P ++ A + Q I SGG+R G D Sbjct: 266 GTAATQEVFIE----------NVGLPILAAIRPAVQALQDLGMHRKVQLIVSGGIRMGAD 315 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + L D+ A+ L Sbjct: 316 VAKALALGADAVAVGTGALIALGDNDPALEEEYAKL 351 >gi|294496228|ref|YP_003542721.1| glutamate synthase (NADPH) GltB2 subunit [Methanohalophilus mahii DSM 5219] gi|292667227|gb|ADE37076.1| glutamate synthase (NADPH) GltB2 subunit [Methanohalophilus mahii DSM 5219] Length = 494 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 103/282 (36%), Gaps = 39/282 (13%) Query: 36 LPEISFDEVDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 LP + V+ K + PL I+ M+ G +I +LA + AM Sbjct: 143 LPLNHEEAVNTGTTIGPKAKQPPMIDTPLYITHMSYGALSREVKI--SLATGSAAVGTAM 200 Query: 91 AVGSQRVMFSDHNAIKSFELRQYAPH--TVLISNLGAVQ---------LNYDFGVQKAHQ 139 G ++ + + +Y P+ +V NL V + G Q + Sbjct: 201 CSGEGGILQESFEKAHKY-IFEYVPNRYSVTDENLKKVDAIEIKIGQSVKPGMGGQLPAE 259 Query: 140 AV--HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-PLLLKEVGCGLS 196 V + G ++ + + N DL +K++ L P+ +K + Sbjct: 260 KVTPEIAKVRGFPEGVDVIS-PSRYEDIKNKDDLKNKVSWLREKSGGKPIGIKIAAGNIE 318 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + D+E+ + + + I GR G + + + + S +PT +L AR + Sbjct: 319 A-DLEVAIHAEPDFITIDGRPGATAAAKKFVKQATS----------MPTLFALYRARKFL 367 Query: 257 NE-----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 ++ + +GGLR D K++ +GA + + L Sbjct: 368 DDRNIKDISLVITGGLRVSSDFAKALAMGADAIAIGTAALMA 409 >gi|326562587|gb|EGE12898.1| L-lactate dehydrogenase [Moraxella catarrhalis 46P47B1] Length = 288 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 55/259 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 N+ FD L R L + D + + +G+ +S P+ I+ TG M Sbjct: 36 QTTYRNNETDFDRIKLRQRVL--VDMDNRSLATQMIGQDVSMPVAIAP-TGFTGMMWADG 92 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLI---SN 122 + A AAEK + ++ + + + A + F+L +++ + + +N Sbjct: 93 EIHAARAAEKFGIPFSLSTMSICSIEDVAENTTKPFWFQLYVMRDKEFMENLIKRAKAAN 152 Query: 123 LGAVQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN--------FADL- 171 A+ L D V Q+ + L A N L + +P N F ++ Sbjct: 153 CSALILTADLQVLGQRHKDIKNGLSAPPKPTLKNILNLMTKPEWCYNMLGTKRHTFRNIA 212 Query: 172 -------------------------SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 +A + PL+LK + + D + + Sbjct: 213 GHAKNVSDLSSLSAWTAEQFDPGLSWDDVARIKDMWGGPLILKGI---MEPEDAIMAARF 269 Query: 207 GIRYFDIAGRGGTSWSRIE 225 G I+ GG Sbjct: 270 GADAMVISNHGGRQLDGAP 288 >gi|148253458|ref|YP_001238043.1| putative large subunit of glutamate synthase [Bradyrhizobium sp. BTAi1] gi|146405631|gb|ABQ34137.1| putative large subunit of glutamate synthase [Bradyrhizobium sp. BTAi1] Length = 441 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 201 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVIVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGV 271 GT + + + G+PT ++ A + Q I SGG+R G Sbjct: 260 GT-----------AATQDVFIEHVGLPTLAAIRPAVQALQDLGLHRKLQLIVSGGIRTGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A + L Sbjct: 309 DVAKALALGADAVSIGTAALIALGDNDPQWEAEYQKL 345 >gi|149202468|ref|ZP_01879440.1| glutamate synthase family protein [Roseovarius sp. TM1035] gi|149143750|gb|EDM31784.1| glutamate synthase family protein [Roseovarius sp. TM1035] Length = 447 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ L + VP+ +K VG D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKLLELREITGWRVPIYIK-VGGARPYFDTTLAVKAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G P + A + Q I SGG+R G Sbjct: 263 GT-----------AATQDVFIEHVGQPILACIREAVRALQDLGMHREVQLIVSGGIRTGA 311 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 312 DVAKCMALGADAVAIGTAALIAL 334 >gi|182679551|ref|YP_001833697.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635434|gb|ACB96208.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Beijerinckia indica subsp. indica ATCC 9039] Length = 398 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 21/160 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + A L++K + +S E + G ++ GG + + ++ Sbjct: 241 DLMRRIRDAWPGKLVIKGI---MSVGAAEEAAEIGADGIVVSNHGGRQFDAAPAAIEVLP 297 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +I + G+R+G D+L+++ LGA F+ Sbjct: 298 EIAA-----------------AVGARLSVMMDSGVRSGEDVLRAVSLGAEFVFSGRSFVY 340 Query: 293 -PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 A A++ + + + M LG + ++ + Sbjct: 341 GAAAAGPAGAAHALQIFKDDILRGMAQLGITDLTQMRPSR 380 Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 ++ + RN++ D L+ L + G+ P+ IS + G N + Sbjct: 37 EEVALRRNREALDRVLLVPHYLKSVGAR--STQTRLFGRTYDLPIGISPV-GLANAIWPG 93 Query: 75 INRNLAIAAEKTKVAMAVGS 94 I++ LA AA V + + Sbjct: 94 IDKMLAEAARNANVPYGLST 113 >gi|146342716|ref|YP_001207764.1| putative large subunit of glutamate synthase [Bradyrhizobium sp. ORS278] gi|146195522|emb|CAL79547.1| putative large subunit of glutamate synthase [Bradyrhizobium sp. ORS278] Length = 441 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 201 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVIVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA------QFIASGGLRNGV 271 GT + + + G+PT ++ A + Q I SGG+R G Sbjct: 260 GT-----------AATQDVFIEHVGLPTLAAIRPAVQALQDLGLHRKLQLIVSGGIRTGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A + L Sbjct: 309 DVAKALALGADAVSIGTAALIALGDNDPQWEAEYQKL 345 >gi|241111338|ref|XP_002399255.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215492931|gb|EEC02572.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 77 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESL 308 E+ R + GG+R G D++K++ LGA + P A + V +E L Sbjct: 6 EVVRAVRGRVEVYLDGGVRRGTDVVKALALGAKAVFVGRPAIWGLAYNGQAGVSRMLEIL 65 Query: 309 RKEFIVSMFLLG 320 R+E ++ L+G Sbjct: 66 REELDRALALMG 77 >gi|206900301|ref|YP_002250051.1| glutamate synthase [Dictyoglomus thermophilum H-6-12] gi|206739404|gb|ACI18462.1| glutamate synthase [Dictyoglomus thermophilum H-6-12] Length = 502 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 103/334 (30%), Gaps = 63/334 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G R + Sbjct: 162 LELEVPVMFSAMSFGSISLNAC--ESLARAAVEVGTYWNTGEGGLHKKLYPYKHRAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF-LHLNPLQEII 160 + ++ + +G G + + A + + + L Sbjct: 220 ASGRFGVDIEYLYSGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSATRMIPIGTDALSPAP 279 Query: 161 QPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 Q + + DL I L A++ P+ +K + ++G + I G G Sbjct: 280 QHDI-YSIEDLRQLIFALKEAVNYEKPVGVKIAAVHNVAAIASGIARAGADFIAIDGFRG 338 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVD 272 + + RD + GIP L+L N+ I +G +RN D Sbjct: 339 GTGAAPTRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSIRNSAD 388 Query: 273 ILKSIILGASLGGLASPFLKPA------------------------------MDSSDAVV 302 ++K+I LGA + + L + Sbjct: 389 VIKAIALGADAVYIGTAALISLGCHLCQNCHTGKCNWGIATQDPKLVKRLNPEIGARRAA 448 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ E + +G ++ L N ++R Sbjct: 449 NLLKAWAHEIKEMLGGMGINAIESLRGNRLMLRG 482 >gi|217978772|ref|YP_002362919.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] gi|217504148|gb|ACK51557.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] Length = 444 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 59/156 (37%), Gaps = 22/156 (14%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG D L +K+G + G G Sbjct: 203 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-VGASRPYYDTALAVKAGADVIVLDGMQG 261 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVD 272 + + E + GIP ++ A + Q I SGG+RNG D Sbjct: 262 GTAATQEVFIEH----------VGIPILAAIRPAVQALQDLGMHRKVQLIVSGGIRNGAD 311 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + K++ LGA + + + L D+ A ++L Sbjct: 312 VAKALALGADVASIGTAALIALGDNDPRFEAEYQAL 347 >gi|325094002|gb|EGC47312.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ajellomyces capsulatus H88] Length = 309 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 20/134 (14%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N + + L S ++ ++LK + ++ D L + G ++ G + S Sbjct: 74 NISHNRERCVQLCSRTNLKIILKGI---MTVEDTLLAIGHGADAIIVSNNEGRQLDSVPS 130 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ +I I G+ G D+ K++ LGA + Sbjct: 131 RMEVLPEI-----------------VSAVRGRVPVIIESGITRGSDVFKALALGADFTLV 173 Query: 287 ASPFLKPAMDSSDA 300 L Sbjct: 174 GRSALWGLNFGGQE 187 >gi|307594810|ref|YP_003901127.1| glutamate synthase [Vulcanisaeta distributa DSM 14429] gi|307550011|gb|ADN50076.1| Glutamate synthase (NADPH) [Vulcanisaeta distributa DSM 14429] Length = 746 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 39/286 (13%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 D+ L+ + G ++S P+ ++ M+ G+ + N A A+ Sbjct: 66 GIDEIRLVGN-----ERGRASLTSFIGGIEVSAPIYLADMSFGS--LAGVPNVVEAELAD 118 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSF-------------ELRQYAPHTVLISNLGAVQLNYD 131 + + G + + F L + I + Sbjct: 119 ELMLISGTGEGGLHPEVARHRRIFVQWASARFGVDINTLMAGMGIVIKIGQGAKPGIGGH 178 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 K + + + ++ L + + DL +I L A P+ +K Sbjct: 179 LPGSKVTSVIS--QVRRIPVGVDALSPAPHHDI-YSIEDLKQRIDALKEATGKPVFVKIA 235 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 + + + G I G G + + RD + GIP L++ Sbjct: 236 ATNYTPYIVTGIARMGADGVIIDGHGAGTGATPLVVRD----------NVGIPIELAVAS 285 Query: 252 A------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 A + IASG + D K + LGA L + L Sbjct: 286 ADRMLREEGLRDRITLIASGRVSTADDAAKLMALGADAIALGTALL 331 Score = 41.0 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%) Query: 267 LRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKR-VQ 325 +R+ DI+K + LGA ++ F++ A+ ++ IE R + FL G KR + Sbjct: 650 VRSSGDIVKLVALGADAVIISG-FVERALHGYES----IEDFR--LRLMRFLTGIKREIA 702 Query: 326 EL 327 +L Sbjct: 703 QL 704 >gi|254526217|ref|ZP_05138269.1| IMP dehydrogenase family protein [Prochlorococcus marinus str. MIT 9202] gi|221537641|gb|EEE40094.1| IMP dehydrogenase family protein [Prochlorococcus marinus str. MIT 9202] Length = 387 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L +M+VP++ G ++ +L + +G+ + G + + Sbjct: 178 NIKDLCQSMNVPVVA---GNCVTYEVAKLLMDAGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ N+ I GG+ G DI K + GA Sbjct: 224 -SRGVLGIGIPQATAIADCSAARNDYFKQSGCYIPIIGDGGIVTGGDICKCLACGADAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPIAKSSNAPGKGFHWGMATPSPLLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQEVEIVI 366 >gi|194336064|ref|YP_002017858.1| Glutamate synthase (NADPH) [Pelodictyon phaeoclathratiforme BU-1] gi|194308541|gb|ACF43241.1| Glutamate synthase (NADPH) [Pelodictyon phaeoclathratiforme BU-1] Length = 529 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 117/329 (35%), Gaps = 68/329 (20%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-LRQY 113 L P+ +S M+ G ++ LA + + K AM G ++ + S+ + +Y Sbjct: 202 LETPIFVSHMSFGALSREAKL--ALAKGSAQAKTAMCSGEGGILPE--SLAASYRYIFEY 257 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----------GLFLHLNPLQEIIQPN 163 P+ +++ ++L ++ A +G Q+II P+ Sbjct: 258 VPNKYSVTDEN-LKLVDAVEIKIGQSAKPGMGGHLPGSKVTCEIAAIRGFREGQDIISPS 316 Query: 164 GNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + S + + P+ +K + G DI++ L +G+ + I GR G Sbjct: 317 HFPDIR-TKEDLRDTVSHLRLKTGGKPIGIK-LAAGHIEEDIDIALFAGVDFITIDGRAG 374 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDI 273 + + + ++ S +PT +L AR + I +GGLR D Sbjct: 375 GTGASPKVVKNAAS----------VPTIFALARARKILDSRGADSVSLIITGGLRLSSDF 424 Query: 274 LKSIILGASL-------------------------GGLAS--PFLKPAMD---SSDAVVA 303 K++ +GA G+A+ P L+ MD S+ V Sbjct: 425 AKALAMGADAIAVGTAAMMAAGCQQYRICNTDKCPVGIATQDPVLRARMDVDKSAIRVAN 484 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNTA 332 +++ +E L G V L Sbjct: 485 FFKAVTEELRDFARLTGNDNVHHLSPTDL 513 >gi|108801858|ref|YP_642055.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. MCS] gi|119871011|ref|YP_940963.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. KMS] gi|126437826|ref|YP_001073517.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. JLS] gi|108772277|gb|ABG10999.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. MCS] gi|119697100|gb|ABL94173.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. KMS] gi|126237626|gb|ABO01027.1| glutamate synthase (NADPH) GltB2 subunit [Mycobacterium sp. JLS] Length = 446 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 33/167 (19%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + ++ + + + P+ +K VG + D++L + +G + G G Sbjct: 197 RHPDWTGPDDLTIKINELREITDWEKPIYVK-VGATRTYYDVKLAVHAGADVVVVDGMQG 255 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-----------------AQF 261 + + E + G+PT ++ A E Q Sbjct: 256 GTAATQEVFIEH----------VGVPTLAAIPQAVQALQELGVHRKAGASGATGDGSVQL 305 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 I SGG+R G D+ K++ LGA + + L D+ A E + Sbjct: 306 IVSGGIRTGADVAKALALGADAVAIGTAALIALGDNHPRYAAEYEKI 352 >gi|77413267|ref|ZP_00789463.1| guanosine monophosphate reductase [Streptococcus agalactiae 515] gi|77160654|gb|EAO71769.1| guanosine monophosphate reductase [Streptococcus agalactiae 515] Length = 327 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 86/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV+ P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVI-------PANMQTIIDEEVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 +A + + K F +++ ++ S +G YDF A + Sbjct: 59 -TLACEGYFYIMHRFNEEERKPF-IKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + E+IQ + + ++ G + + Sbjct: 117 TIDIAHGHSNSVIEMIQ---------------HIKQELPGTFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V + ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVEGQQFKE 254 >gi|254459555|ref|ZP_05072971.1| glutamate synthase large subunit [Rhodobacterales bacterium HTCC2083] gi|206676144|gb|EDZ40631.1| glutamate synthase large subunit [Rhodobacteraceae bacterium HTCC2083] Length = 448 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K V D L +K+G + G +G Sbjct: 205 RHPDWTGPDDLEIKILELREITGWKVPIYVK-VAGARPYYDTTLAIKAGADAVVLDGMQG 263 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q I SGG+R+G Sbjct: 264 GT-----------AATQDVFIEHVGQPTLAIIRPAVQALQDLGMHRKVQLILSGGIRSGA 312 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A +L Sbjct: 313 DVAKAMALGADAVAIGTAALIALGDNDPKWEAEYNAL 349 >gi|157413532|ref|YP_001484398.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9215] gi|157388107|gb|ABV50812.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9215] Length = 387 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L +M+VP++ G ++ +L + +G+ + G + + Sbjct: 178 NIKDLCQSMNVPVVA---GNCVTYEVAKLLMDAGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ N+ I GG+ G DI K + GA Sbjct: 224 -SRGVLGIGIPQATAIADCSAARNDYFKQSGRYIPIIGDGGIVTGGDICKCLACGADAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPIAKSSNAPGKGFHWGMATPSPLLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQEVEIVI 366 >gi|29346743|ref|NP_810246.1| dihydroorotate dehydrogenase 2 [Bacteroides thetaiotaomicron VPI-5482] gi|29338640|gb|AAO76440.1| putative dihydropyrimidine dehydrogenase [NADP+] precursor [Bacteroides thetaiotaomicron VPI-5482] Length = 326 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 27/263 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + N+ LA A V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSAGK--NKRLAEAGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLAEYLTLIKESKKECSIPIIASINCYSDSEWVDFAKQIQ 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDVQYTYGSFEQRHIDILRHIKQTVTIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE+ + ++ D P + +A N+ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIENMEQVSGEVFSTSADLATP-LRWIGIASSVVNKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG 284 ASGG+ N ++K+I+ GAS Sbjct: 239 AASGGVANPEAVVKAILAGASAV 261 >gi|77408674|ref|ZP_00785407.1| guanosine monophosphate reductase [Streptococcus agalactiae COH1] gi|77172722|gb|EAO75858.1| guanosine monophosphate reductase [Streptococcus agalactiae COH1] gi|319745128|gb|EFV97453.1| GMP reductase [Streptococcus agalactiae ATCC 13813] Length = 327 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 87/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV+ P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVI-------PANMQTIIDEEVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 +A + + A + F +++ ++ S +G YDF A + Sbjct: 59 -TLACEGYFYIMHRFNEEARRPF-IKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + E+IQ + + ++ G + + Sbjct: 117 TIDIAHGHSNSVIEMIQ---------------HIKQELPGTFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V + ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVEGQQFKE 254 >gi|78779456|ref|YP_397568.1| inositol-5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9312] gi|78712955|gb|ABB50132.1| IMP dehydrogenase related 2 [Prochlorococcus marinus str. MIT 9312] Length = 387 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L +M+VP++ G ++ +L +++G+ + G + + Sbjct: 178 NIKNLCQSMNVPVIA---GNCVTYEVAKLLMQAGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ ++ I GG+ G DI K + GA Sbjct: 224 -SRGVLGIGIPQATAIADCSSARDDYFKESGHYIPIIGDGGIVTGGDICKCLACGADAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPIAKSSNAPGKGFHWGMATPSPILPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQEVEIVI 366 >gi|254513715|ref|ZP_05125778.1| glutamate synthase family protein [Rhodobacteraceae bacterium KLH11] gi|221531945|gb|EEE35002.1| glutamate synthase family protein [Rhodobacteraceae bacterium KLH11] Length = 366 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K VG D L +K+G + G +G Sbjct: 204 RHPDWTGPDDLEIKILELREITGWQVPIYVK-VGATRPYYDTALAVKAGADVVVMDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A + Q + SGG+R G Sbjct: 263 GT-----------AATQDVFIEHVGLPTLSCIRPAVQALQDLGVHREVQLVISGGIRTGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D K++ LGA + + L D+ A + L Sbjct: 312 DAAKALALGADAVAIGTAALVALGDNDPKWEAEYQKL 348 >gi|326390996|ref|ZP_08212545.1| Glutamate synthase (NADPH) [Thermoanaerobacter ethanolicus JW 200] gi|325992941|gb|EGD51384.1| Glutamate synthase (NADPH) [Thermoanaerobacter ethanolicus JW 200] Length = 501 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 107/342 (31%), Gaps = 79/342 (23%) Query: 53 KKLSFPLLISSMTGGN--------------------NKMIERINRNLAIAAEKTKVAMAV 92 KL P++ S+M+ G+ N ++++ + T V +A Sbjct: 163 LKLETPIMFSAMSYGSISYNAHAALARAAEELGILYNTGEGGLHKDFRKYGKNTIVQVAS 222 Query: 93 GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 G V N + E++ + G V + A ++ A + Sbjct: 223 GRFGVDREYLNTAAAIEIK-----IGQGAKPGIGGHLPGEKVSEDISATRMIPAGSDAIS 277 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I DL+ I L A D P+ +K + ++G Y Sbjct: 278 PAPHHDIYSIE------DLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIASGIARAGADY 331 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIAS 264 I G G + + + RD + GIP ++ + +A+ Sbjct: 332 IAIDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISLVAA 381 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA------------------------------ 294 G +RN DI+K+I LGA +A+ L Sbjct: 382 GSIRNSADIVKAIALGADAVYIATAALIALGCHMCQKCHTGKCNWGIATQDPNLVKRLNP 441 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +V +++ E + +G ++ L N ++R Sbjct: 442 EIGYKRLVNLVQAWSHEIKEMLGGMGINDIESLKGNRLMLRG 483 >gi|39998539|ref|NP_954490.1| glutamate synthase-related protein [Geobacter sulfurreducens PCA] gi|39985486|gb|AAR36840.1| glutamate synthase-related protein [Geobacter sulfurreducens PCA] gi|298507482|gb|ADI86205.1| ferredoxin-dependent glutamate synthase [Geobacter sulfurreducens KN400] Length = 1510 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 90/265 (33%), Gaps = 29/265 (10%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + DEVD +V + P+LIS+M+ G+ E R A AA++ + Sbjct: 841 VDPDEVDTTV----GDHNLPILISAMSFGSQ--GETPFRIYAEAAKRLNIICMNGEGGEI 894 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A +G R A F + ++ + Q G V Sbjct: 895 ADMLGQYRKNRGQQIASGRFGVNMAFLNSADFLEIKVGQ-GAKPGEGGHLPGFKVTAKIA 953 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 H P +I P+ N + + +A + + + +K Sbjct: 954 AARHATPGVSLISPSNNHDIYSIED-LAQIVEELRTANPWARMSVKVPAVAGIGTIALGV 1012 Query: 204 LKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+G I+G GGT + R + + G+ +A + + Sbjct: 1013 AKAGADIITISGYDGGTG-----AARKHAIKFVGLPAEIGVSEAHKALVAAGMRQKVEIW 1067 Query: 263 ASGGLRNGVDILKSIILGASLGGLA 287 A GG R G D++K ++LGA+ G Sbjct: 1068 ADGGARTGRDVVKLMLLGANRVGFG 1092 >gi|146295624|ref|YP_001179395.1| glutamate synthase (NADPH) [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409200|gb|ABP66204.1| glutamate synthase (NADPH) GltB2 subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 502 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 103/338 (30%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVEVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA------------------------------MDS 297 RN D++K+I LGA + + L Sbjct: 384 RNSADVVKAIALGADAVFIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + E + L+G ++ L N ++R Sbjct: 444 ARRAANLLRAWAHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|302872730|ref|YP_003841366.1| Glutamate synthase (NADPH) [Caldicellulosiruptor obsidiansis OB47] gi|302575589|gb|ADL43380.1| Glutamate synthase (NADPH) [Caldicellulosiruptor obsidiansis OB47] Length = 502 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 104/338 (30%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVQVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA------------------------------MDS 297 RN D++K+I LGA + + L Sbjct: 384 RNSADVVKAIALGADAVFIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +++ E + L+G ++ L N ++R Sbjct: 444 AKRAANLLKAWSHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|146295597|ref|YP_001179368.1| glutamate synthase (NADPH) [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409173|gb|ABP66177.1| glutamate synthase (NADPH) GltB2 subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 502 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 103/338 (30%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVEVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA------------------------------MDS 297 RN D++K+I LGA + + L Sbjct: 384 RNSADVVKAIALGADAVFIGTAALISLGCHVCQKCHTGRCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + E + L+G ++ L N ++R Sbjct: 444 ARRAANLLRAWAHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|313889420|ref|ZP_07823068.1| GMP reductase [Streptococcus pseudoporcinus SPIN 20026] gi|313122252|gb|EFR45343.1| GMP reductase [Streptococcus pseudoporcinus SPIN 20026] Length = 327 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 89/286 (31%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ N+A Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVKLGNYSFKLPVI-------PANMQTIIDENIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 ++A A + D A K F +++ +L S +G YDF A + Sbjct: 59 -QLAKAGYFYIMHRFDEEARKPF-IKRMHDQGLLASISVGVKAYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + I + + + ++ G + + Sbjct: 117 TIDIAHGHAN---------------SVIDMIKHIKAELPDTFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V ES ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGESFKE 254 >gi|309774720|ref|ZP_07669743.1| glutamate synthase domain protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917493|gb|EFP63210.1| glutamate synthase domain protein [Erysipelotrichaceae bacterium 3_1_53] Length = 467 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 119/363 (32%), Gaps = 69/363 (19%) Query: 25 FFDDWHLIHRAL---PEISFDEVDPSVEFLGKKLSFP------LLISSMTGGNNKMIERI 75 +DD L+ L P +VD +GK P + +S M+ G + Sbjct: 103 GWDDILLLGGQLSNPPLADKADVDT-TTIIGKHARKPMVLEHAVYVSHMSFGALSKEAKT 161 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE------------LRQYAPHTVLISNL 123 ++ AA T G +H FE L++ + I Sbjct: 162 ALSMGTAAVHTAQCSGEGGILPDEINHAYKYIFEYVPNKYSVTDENLKRSDAIEIKIGQG 221 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + +K + + + L + + + + +L S + S Sbjct: 222 SKPGMGGHLPAEKVTEEISAIRGKPLHKDIISPSKFEEIKTKDDLKNLVSSLRERSE--G 279 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K + G D+E + + I GRGG + + + +D + + Sbjct: 280 RPIGIK-IAAGHIEADLEWIAYAQPDFITIDGRGGATGASPKYLKDNAT----------V 328 Query: 244 PTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASL---------------- 283 PT +L AR Y ++ + I +GG R +++K++ +GA Sbjct: 329 PTVYALARARAYMDKHHMSQELIITGGFRTSGEMIKALAMGADAVAIASAAMMAIGCQQY 388 Query: 284 ---------GGLAS--PFLK---PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYL 329 G+A+ P L+ + + + LR+E + G + +L Sbjct: 389 RICHNGKCPMGIATQDPELRKNFSIEKGAKRLENYLNVLREELKSFARISGHTSIHDLSE 448 Query: 330 NTA 332 + Sbjct: 449 DDL 451 >gi|311899868|dbj|BAJ32276.1| putative oxidoreductase [Kitasatospora setae KM-6054] Length = 368 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 23/158 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + +A L +PL+LK V L++ D ++ G+ ++ GG Sbjct: 216 WADLAWLRRHTTLPLVLKGV---LTAEDARRAVEHGVDGLVVSNHGGRQLDGTP------ 266 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 P +L E + GGLR+G D+ K++ LGA + P Sbjct: 267 ------------PALDALAEVVDAVPAEYPVLVDGGLRHGGDLAKALALGARAALVGRPV 314 Query: 291 LK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L A +D A ++ LR+E + +M L G + +L Sbjct: 315 LWGLAHGGADGARAVLDLLREELLDTMVLAGRPTLADL 352 >gi|160891910|ref|ZP_02072913.1| hypothetical protein BACUNI_04368 [Bacteroides uniformis ATCC 8492] gi|156858388|gb|EDO51819.1| hypothetical protein BACUNI_04368 [Bacteroides uniformis ATCC 8492] Length = 325 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 41/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P+++SS +G + + N+ L+ A + ++ M Sbjct: 4 LETTFAGLKLKNPIIVSS-SGLTDSAAK--NQKLSEAGAGAIVLKSLFEEQIMMEADWMG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + + I + ++ + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKESKKVCNIPIIASINCYQNADWVEFATKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q T ++ + + +P+++K + + I+ Sbjct: 121 AGADALEINILALQTDVQYTYGTFEQRHIDILSHIKKTVKIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE + ESD+ + GI A Sbjct: 181 LYANGAAAVVLFNRFYQPDINIEKMIQVSGNVFSNESDLSKALRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 N+ + ASGG+ + ++K+I+ GAS + S + + + + + Sbjct: 233 VNKLDYAASGGIHSPEGVVKAILAGASAVEICSVLYQNSATIIEEYIRFLNLWMD 287 >gi|317480382|ref|ZP_07939482.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 4_1_36] gi|316903460|gb|EFV25314.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 4_1_36] Length = 325 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 102/295 (34%), Gaps = 41/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P+++SS +G + + N+ L+ A + ++ M Sbjct: 4 LETTFAGLKLRNPIIVSS-SGLTDSAAK--NQKLSEAGAGAIVLKSLFEEQIMMEADWMG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + + I + ++ + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKESKKVCNIPIIASINCYQNADWVEFATKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q T ++ + + +P+++K + + I+ Sbjct: 121 AGADALEINILALQTDVQYTYGTFEQRHIDILSHIKKTVKIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE + E+D+ + GI A Sbjct: 181 LYANGAAAVVLFNRFYQPDINIEKMIQVSGNVFSNEADLSKALRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 N+ + ASGG+ + ++K+I+ GAS + S + + + + + Sbjct: 233 VNKLDYAASGGIHSPEGVVKAILAGASAVEICSVLYQNSATIIEEYIRFLNLWMD 287 >gi|326204194|ref|ZP_08194054.1| Glutamate synthase (NADPH) [Clostridium papyrosolvens DSM 2782] gi|325985705|gb|EGD46541.1| Glutamate synthase (NADPH) [Clostridium papyrosolvens DSM 2782] Length = 501 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 98/345 (28%), Gaps = 70/345 (20%) Query: 46 PSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 + +L P++ S+M+ G+ +LA AAE+ G + + Sbjct: 155 LKTKIAPHLELQVPIMFSAMSYGSISRNAH--ESLARAAEELGTYYNTGEGGLNEDFYQY 212 Query: 105 IKS---------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAV---HVLGAD 147 K+ F + + Q + +K + V ++ Sbjct: 213 GKNTIVQVASGRFGVHVGYLSAGAAIEIKMGQGAKPGIGGHLPGEKVGEDVSKTRMIPVG 272 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 + P +I + + P+++K + +SG Sbjct: 273 SDAISPAPHHDIYSIEDLRQLVFSLKEATAYTK----PVIVKIAAVHNVAAIASGIARSG 328 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQF 261 I G G + + RD + GIP L+L N Sbjct: 329 ADIIAIDGYRGGTGAAPTRIRD----------NVGIPIELALASVDQRLRDEGIRNNVSL 378 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 + +G +RN DI+K+I LGA + + L Sbjct: 379 VVAGSIRNSGDIVKAIALGADAVYIGTSALIALGCHVCRSCHGGKCNWGIATQRPDLVKR 438 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ + + E + +G ++ L N ++R Sbjct: 439 LNPDIGYKRLINLVHAWDHEIKEMLGGMGINAIESLKGNRLMLRG 483 >gi|148239927|ref|YP_001225314.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. WH 7803] gi|147848466|emb|CAK24017.1| IMP dehydrogenase/GMP reductase [Synechococcus sp. WH 7803] Length = 387 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 114/393 (29%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I + R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 DIQLGRSKVVRRAYGIDEIALVPGGRTVDPEVT----DTRWTLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G + N L A K A V + ++S+ Sbjct: 58 VDVEMAVKLSKLGALGVLNLEGVQTRYDDPNDALDRIASVGKDAF-VPLMQELYSEPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNG 164 + +R+ + AV + +A+ GAD F+ + E I P G Sbjct: 117 R--LIRKRIQDIKAQGGIAAVS-GTPVAAMRFGKAIAEAGADLFFVQATVVSTEHIGPEG 173 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + L M VP+++ G ++ +++G + G + + Sbjct: 174 RESL-----NLEALCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + +A GG+ G DI K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADYEQESGRYVPIVADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPF-----------------------------------LKPAMDSSDAV 301 I GA + SP L+ + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSLERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++E+ ++ Sbjct: 334 DDGTHNLLGALKTSMGTLGARTIKEMQSVEVVV 366 >gi|18314071|ref|NP_560738.1| glutamate synthase subunit, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161653|gb|AAL64920.1| glutamate synthase subunit, conjectural [Pyrobaculum aerophilum str. IM2] Length = 689 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 109/345 (31%), Gaps = 67/345 (19%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 ++D ++ G +L P+ + M+ G + N +A A + +G + Sbjct: 78 DIDIGIKLGGAELQMPIYVGDMSFGA--LSGNPNIAIAKAVTEAGAVAGIGEGGLHPEVA 135 Query: 103 N----AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA-------HQAVHVLGADGLFL 151 ++ R +L + + AV + G + + V ++ Sbjct: 136 KYRNIVVQWASARFGMDMNLLTAGI-AVNIKIGQGAKPGIGGHLPGRKVVDII---AKLR 191 Query: 152 HLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + E I P + + DL+ ++ L P+L+K +S Sbjct: 192 KIPVGSEAISPAPHHDIYSIEDLAQRVKALRDLTKKPILVKVAAVNKIHYVSVGVARSTA 251 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------CNEAQFI 262 I G G + + RD GIP +++ + + + I Sbjct: 252 NGIIIDGAGAGTGATPIVARDHL----------GIPIDIAVPVVDQWIRKDGTRDGFLMI 301 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP----------------------------- 293 A G L + +D+ K I LGA + L + L Sbjct: 302 AGGMLYSPLDVAKIIALGADMANLGTAALLAMGCIMCHACHTGGCPTALTNMIGSGKELD 361 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL--YLNTALIRH 336 S + + ++ + ++ LG ++EL + IRH Sbjct: 362 IEWGSALLRNYLLAVSRGLKAVLYALGMSSIKELVGRRDFLQIRH 406 >gi|312794532|ref|YP_004027455.1| glutamate synthase (NADPH) [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181672|gb|ADQ41842.1| Glutamate synthase (NADPH) [Caldicellulosiruptor kristjanssonii 177R1B] Length = 502 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 109/338 (32%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVEVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLG-------------------------GLAS--PFLKPAMD---S 297 RN D++K+I LGA G+A+ P L ++ Sbjct: 384 RNSSDVVKAIALGADAVYIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +++ E + L+G ++ L N ++R Sbjct: 444 ARRAANLLKAWSHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|145591329|ref|YP_001153331.1| glutamate synthase (NADPH) [Pyrobaculum arsenaticum DSM 13514] gi|145283097|gb|ABP50679.1| glutamate synthase (NADPH) GltB2 subunit [Pyrobaculum arsenaticum DSM 13514] Length = 684 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 87/260 (33%), Gaps = 18/260 (6%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +VD ++F G +L+ P+ + M+ G + N +A + + + +G + Sbjct: 75 DVDVGLDFFGTRLTAPIYLGDMSFGA--LSGNPNIAIAKVSTEEGMVAGIGEGGLHPEVA 132 Query: 103 N----AIKSFELRQYAPHTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 ++ R +L + N+ Q G+ + V + Sbjct: 133 KYRNIVVQWASARFGMDMALLRAGLAVNIKIGQ-GAKPGIGGHLPGIKVTKIIAELRKIP 191 Query: 155 PLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 E + P + + DL+ ++ L P+L+K +S Sbjct: 192 EGSEALSPAPHHDIYSIEDLAQRVKALRDLTGKPVLVKVAAVNKIMYVAVGVSRSTAEGI 251 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 I G G + + S R+ + D+ IP + I G L + Sbjct: 252 IIDGAGAGTGATPISVRNHLG----IPIDYAIPVVDKWLRENGARSNFLVIGGGMLYSAS 307 Query: 272 DILKSIILGASLGGLASPFL 291 DI K I LGA + + + L Sbjct: 308 DIAKLIALGADMANIGTAAL 327 >gi|251771063|gb|EES51647.1| Glutamate synthase (ferredoxin) [Leptospirillum ferrodiazotrophum] Length = 1540 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 110/276 (39%), Gaps = 36/276 (13%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV-- 88 L+ P +S + VD S+ + ++P +ISSM+ G+ + R A A E+ + Sbjct: 869 LVPHGSP-LSPERVDVSI----LEQNYPFVISSMSFGSQGEVAY--RAYAEACEQLGIIS 921 Query: 89 --------AMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAH 138 +G A F + R +L +G + G Sbjct: 922 LNGEGGEIGDMIGKYPKSRGQQIASGRFGVNIRLLNSSGLLEIKIGQGAKPGEGGHLPGR 981 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLK-EVG 192 + + NP ++I P+ N + + +A L + + +++K V Sbjct: 982 KVSQKI---ARARRANPGVDLISPSNNHDLYSIED-LAQLVAELKSANPRARIIVKIPVI 1037 Query: 193 CGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G+ ++ I + K+G ++G GGT +R+ + + + + + G+ + Sbjct: 1038 PGVGTIGIGIA-KAGADIITVSGYDGGTGAARLHALKHVGLPV-----EIGVSEVHRALL 1091 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + ++ + GGL++ VD++K + LGA+ G A Sbjct: 1092 SAGLRDQVEVWGDGGLKSSVDVVKLMCLGANRVGFA 1127 >gi|299783379|gb|ADJ41377.1| Isopentenyl-diphosphate delta-isomerase [Lactobacillus fermentum CECT 5716] Length = 77 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%) Query: 98 MFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 MF+D A +SF + R+ P L++NLGA +K Q ++ + AD L +HLNP Sbjct: 1 MFNDEAAKESFAVLREENPDGFLMANLGA-----GADFKKVRQVINFIDADALEIHLNPA 55 Query: 157 QEIIQPNGNTNF 168 QE+I G+ F Sbjct: 56 QELIMKEGDREF 67 >gi|329955860|ref|ZP_08296663.1| dihydroorotate dehydrogenase 2 [Bacteroides clarus YIT 12056] gi|328525240|gb|EGF52290.1| dihydroorotate dehydrogenase 2 [Bacteroides clarus YIT 12056] Length = 325 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 100/295 (33%), Gaps = 41/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P++ISS +G + + N+ L A + ++ M Sbjct: 4 LETTFAGLKLRNPIIISS-SGLTDSAAK--NQKLYEAGAGAIVLKSLFEEQIMMEADWLG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + + I + ++ D + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKESKKVCDIPIIASINCYQDADWIEFAKKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q + ++ + +++P+++K + + I+ Sbjct: 121 AGADALEINILALQTDMQYAYGSFEQRHIDILSHIKKTVNIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRD-------LESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE ++D+ + GI A Sbjct: 181 LYANGAAAVVMFNRFYQPDIDIEKMAQSAGSVFSTDADLSKSLRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 + + ASGG+ ++K+I+ GAS + S + + D V + Sbjct: 233 VGKLDYAASGGIHAPEGVVKAILAGASAVEICSVLYQNSYAIIDEYVRFLNLWMD 287 >gi|312621296|ref|YP_004022909.1| glutamate synthase (NADPH) [Caldicellulosiruptor kronotskyensis 2002] gi|312201763|gb|ADQ45090.1| Glutamate synthase (NADPH) [Caldicellulosiruptor kronotskyensis 2002] Length = 502 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 109/338 (32%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVEVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLG-------------------------GLAS--PFLKPAMD---S 297 RN D++K+I LGA G+A+ P L ++ Sbjct: 384 RNSADVVKAIALGADAVYIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +++ E + L+G ++ L N ++R Sbjct: 444 ARRAANLLKAWSHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|295695823|ref|YP_003589061.1| ferredoxin-dependent glutamate synthase [Bacillus tusciae DSM 2912] gi|295411425|gb|ADG05917.1| ferredoxin-dependent glutamate synthase [Bacillus tusciae DSM 2912] Length = 490 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 98/289 (33%), Gaps = 57/289 (19%) Query: 44 VDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 +D SV + L+ P+LI M G + + L A + G V Sbjct: 114 IDLSVAIGPRARRPLHLAIPILIGGM-GYGVGITRQAWSALLGGATAMGTVVNTGEGVVY 172 Query: 99 FSDHNAIKS-----FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL 153 D +A + +A L+ AV++++ G GL +H+ Sbjct: 173 LEDVDAAGGRFILQWSRAHWAKEPELVRASSAVEIHFGQGAST-----------GLGIHI 221 Query: 154 NP--LQEII---------QPNGNTNFADL-----SSKIALLSSAM--DVPLLLKEVGCGL 195 P L+E F + S++ M VP+ K Sbjct: 222 PPEELKEARSAMKLGPREWARIGEQFPGVQGVRDLSRMVAFLREMSGGVPIGAKIAPGDD 281 Query: 196 SSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + +E L+ + + I G GT S + D+G+PT +L AR Sbjct: 282 IEVCLEALLECDVDFITIDGAQAGTKGSEPIAE-----------DDFGLPTFFALSRARR 330 Query: 255 YCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 Y + + I SGGL LK+I LGA+ + SP L A Sbjct: 331 YFDAHRVKDVSLIISGGLATPGHFLKAIALGATAVAIGSPALYAASHGQ 379 >gi|270296422|ref|ZP_06202622.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273826|gb|EFA19688.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 325 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 102/295 (34%), Gaps = 41/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P+++SS +G + + N+ L+ A + ++ M Sbjct: 4 LETTFAGLKLRNPIIVSS-SGLTDSAAK--NQKLSEAGAGAIVLKSLFEEQIMMEADWMG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + + I + ++ + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKESKKVCNIPIIASINCYQNADWVEFAAKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q T ++ + + +P+++K + + I+ Sbjct: 121 AGADALEINILALQTDVQYTYGTFEQRHIDILSHIKKTVKIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE + E+D+ + GI A Sbjct: 181 LYANGAAAVVLFNRFYQPDINIEKMIQVSGNVFSNEADLSKALRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 N+ + ASGG+ + ++K+I+ GAS + S + + + + + Sbjct: 233 VNKLDYAASGGIHSPEGVVKAILAGASAVEICSVLYQNSATIIEEYIRFLNLWMD 287 >gi|88603870|ref|YP_504048.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei JF-1] gi|88189332|gb|ABD42329.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei JF-1] Length = 486 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 90/319 (28%), Gaps = 103/319 (32%) Query: 110 LRQYAPHTVLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 ++ H +++ G ++ +D + + + V+ ++G+ + +QE+++ Sbjct: 153 VKSIMTHEPIVAKEGISIDDAFDLMYSRKVERLPVVDSEGILTGIISMQELLEKRQFPQA 212 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++A+ L +++G+ + G + + + S R Sbjct: 213 IRDDNGNLRVAAAVG----------PFDHARAMLLVEAGVDAIVVDCAHGHNLNVVRSVR 262 Query: 229 DLE--------------SDIGIVFQD----------------------WGIPTPLSLEMA 252 D++ D G+P ++ Sbjct: 263 DIKGSVQVDVVAGNIATKQAAEALVDSVDGLKVGIGPGSICTTRVVAGVGVPQVTAIASV 322 Query: 253 RPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL------------------- 291 + IA GG+R D+ K+I GA + + F Sbjct: 323 AEVAKDADVPIIADGGIRFSGDVAKAIAAGADSVMMGNLFAGTDESPGQIVTIQSRKYKQ 382 Query: 292 ----------------------------KPAMDSSDA-------VVAAIESLRKEFIVSM 316 K + + V I + +M Sbjct: 383 YRGMGSLGVMSTGVSSDRYFQKKEIGKTKFVPEGVEGVTPYVGPVADVIYQMIGGLKSAM 442 Query: 317 FLLGTKRVQELYLNTALIR 335 G + +Q+++ T IR Sbjct: 443 GYTGARNIQDMHEKTRFIR 461 >gi|153808273|ref|ZP_01960941.1| hypothetical protein BACCAC_02561 [Bacteroides caccae ATCC 43185] gi|149129176|gb|EDM20392.1| hypothetical protein BACCAC_02561 [Bacteroides caccae ATCC 43185] Length = 325 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 102/289 (35%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSVGK--NKKLAENGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLAEYIREHKLSEYLTLIKESKKECPIPIIASINCYSDSEWIDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + +++P+++K + + I+ Sbjct: 120 AAGADALEINILALQSDVQYTYGSFEQRHIDILRHIKKTINIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE+ + +I D P + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIENMEHMSGEIFSNASDLANP-LRWIGIASAVVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANPESVVKAILAGASAVEVCSAIYQNTNAFIGEANRFLSAWME 287 >gi|255263656|ref|ZP_05342998.1| glutamate synthase family protein [Thalassiobium sp. R2A62] gi|255105991|gb|EET48665.1| glutamate synthase family protein [Thalassiobium sp. R2A62] Length = 445 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K V D L +K+G + G +G Sbjct: 202 RHPDWTGPDDLEIKILELREITGWKVPIYVK-VAGARPYYDTTLAIKAGADAVVLDGMQG 260 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G PT + A + Q I SGG+R+G Sbjct: 261 GT-----------AATQDVFIEHVGQPTLAIVRPAVQALQDLGMHRKVQLILSGGIRSGA 309 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A L Sbjct: 310 DVAKAMALGADAVAIGTAALIALGDNDPKWEAEYNEL 346 >gi|302392576|ref|YP_003828396.1| glutamate synthase (NADPH) GltB2 subunit [Acetohalobium arabaticum DSM 5501] gi|302204653|gb|ADL13331.1| glutamate synthase (NADPH) GltB2 subunit [Acetohalobium arabaticum DSM 5501] Length = 500 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 101/341 (29%), Gaps = 77/341 (22%) Query: 53 KKLSFPLLISSMTGGNNKMIERIN--RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--- 107 +L P++ +M+ G+ IN + LA AA + + G + + + Sbjct: 162 LELETPIMFGAMSFGSI----SINACKALAQAASEMGMMYNTGEGGLHEDLYQYRDNTIV 217 Query: 108 ------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + Q + + Q + +K + V + Sbjct: 218 QVASGRFGVHQEYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGKEVSETRM------IPEG 271 Query: 157 QEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + P + + DL I L A D P+ +K + +G Sbjct: 272 SDALSPAPHHDIYSIEDLRQLIYALKEATDYEKPVSVKISAVHNVAAIAAGIATAGADII 331 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASG 265 I G G + + RD + GIP L+L N + SG Sbjct: 332 AIDGYRGGTGAAPTMIRD----------NVGIPIELALAAVDDRLREERLRNNVSLVVSG 381 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA------------------------------M 295 +RN DI+K++ LGA ++S L Sbjct: 382 SIRNSADIVKAVALGADAVYVSSAALVALGCHMCQKCYTGKCNWGIATQEPELVKRLNPE 441 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 V IE E + +G ++ L N ++R Sbjct: 442 LGVKRVKNLIEGWSHEIKEILGGMGINALESLRGNRLMLRG 482 >gi|222530321|ref|YP_002574203.1| glutamate synthase [Caldicellulosiruptor bescii DSM 6725] gi|312126412|ref|YP_003991286.1| glutamate synthase (NADPH) [Caldicellulosiruptor hydrothermalis 108] gi|312876679|ref|ZP_07736659.1| Glutamate synthase (NADPH) [Caldicellulosiruptor lactoaceticus 6A] gi|222457168|gb|ACM61430.1| Glutamate synthase (NADPH) [Caldicellulosiruptor bescii DSM 6725] gi|311776431|gb|ADQ05917.1| Glutamate synthase (NADPH) [Caldicellulosiruptor hydrothermalis 108] gi|311796519|gb|EFR12868.1| Glutamate synthase (NADPH) [Caldicellulosiruptor lactoaceticus 6A] Length = 502 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 109/338 (32%), Gaps = 73/338 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG-----------SQRVMFSD 101 +L P++ S+M+ G+ + +LA AA + G +R + Sbjct: 162 LELEVPIMFSAMSFGSISLNAC--ESLAAAAVEVGTYWNTGEGGLHQKLYKYKERAIVQC 219 Query: 102 HNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 + ++ + +G + +K + V + + Sbjct: 220 ASGRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSD 273 Query: 159 IIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 I P + + DL I L A + P+ +K + ++G + I Sbjct: 274 AISPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITI 333 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGL 267 G G + + RD + GIP L+L N+ I +G + Sbjct: 334 DGVRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSI 383 Query: 268 RNGVDILKSIILGASLG-------------------------GLAS--PFLKPAMD---S 297 RN D++K+I LGA G+A+ P L ++ Sbjct: 384 RNSADVVKAIALGADAVYIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIG 443 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +++ E + L+G ++ L N ++R Sbjct: 444 ARRAANLLKAWSHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|327401177|ref|YP_004342016.1| glutamate synthase (NADPH) [Archaeoglobus veneficus SNP6] gi|327316685|gb|AEA47301.1| Glutamate synthase (NADPH) [Archaeoglobus veneficus SNP6] Length = 506 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 116/390 (29%), Gaps = 76/390 (19%) Query: 8 DHINIVCKDPGIDRNKKFFDDWHLI------HRALP-EISFDEVDPSVEF-LGKKLSFPL 59 DH+ + + L AL E++ ++V+ E + P+ Sbjct: 114 DHLLLNASQVTNPSIDPLREPMELRTFLGRKPDALEIEMNGEDVEIKTELHPNVVIETPI 173 Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------QRVMFSDHN----AIKSFE 109 L + M+ G + LA+AA++ G R F D A F Sbjct: 174 LFAGMSYGALSYNAF--KALAMAAKEFGTLFNTGEGGMPKEMREEFKDCTIVQCASGRFG 231 Query: 110 LRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 + + + + Q + +K +++ + + + + Sbjct: 232 VDPEYFNCAAVIEIKIGQGAKPGIGGHLPGEKVK--INISETRMIPEGTDAISPAPHHDI 289 Query: 165 NTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + DLS I L A + P+ +K + +++G I G G + + Sbjct: 290 -YSIEDLSMLIYALKEATNYEKPVCVKIAAVHNVAAIASGIVRAGADIIAIDGFRGGTGA 348 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKS 276 + R+ GIP L+L ++ I GG+R D+ K+ Sbjct: 349 TPKIMREH----------VGIPVELALAAVDQRLREERIRHKCSIIVGGGIRCAADVAKA 398 Query: 277 IILGASLGGLASPFLKPA------------------------------MDSSDAVVAAIE 306 I LGA + + L + +V + Sbjct: 399 IALGADAVYIGTAALIALGCTMCQRCHTGKCAWGICTQDPELSRRLNPKVGAQRLVNLLR 458 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 E + +G ++ L N +R Sbjct: 459 GWSLELKDVLGGMGINAIESLRGNRDHLRG 488 >gi|167762345|ref|ZP_02434472.1| hypothetical protein BACSTE_00699 [Bacteroides stercoris ATCC 43183] gi|167699988|gb|EDS16567.1| hypothetical protein BACSTE_00699 [Bacteroides stercoris ATCC 43183] Length = 325 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 41/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P++ISS +G + + N+ L A + ++ M Sbjct: 4 LETTFAGLKLKNPIIISS-SGLTDSAAK--NQKLYEAGAGAIVLKSLFEEQIMMEADWLG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + I + ++ D + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKETKKVCDIPVIASINCYQDADWIEFARKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ IQ + ++ + +++P+++K + + I+ Sbjct: 121 AGADALEVNILALQTDIQYAYGSFEQRHIDILSHIRKTVNIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRD-------LESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE ++D+ + GI A Sbjct: 181 LYANGAAAVVMFNRFYQPDIDIEKMAQSAGSVFSTDADLSKSLRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 ++ + ASGG+ ++K+I+ GAS + S + + + V + + + Sbjct: 233 VSKLDYAASGGIHAPEGVVKAILAGASAVEICSALYQNSYAIIEEYVRFLSAWME 287 >gi|254439415|ref|ZP_05052909.1| Conserved region in glutamate synthase superfamily [Octadecabacter antarcticus 307] gi|198254861|gb|EDY79175.1| Conserved region in glutamate synthase superfamily [Octadecabacter antarcticus 307] Length = 373 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 100/288 (34%), Gaps = 54/288 (18%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLG-----KKLSFPLLISSMTGGNNKMIERINR 77 ++D L+ L P + D V V KL PL +S M+ G ++ Sbjct: 32 WNDIQLLPAQLFKPPLLDDDPVGTEVVIGPNPQKLLKLKTPLFVSDMSFGALSQSAKV-- 89 Query: 78 NLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 LA AE T + G N+ +EL G + + Sbjct: 90 ALARGAELADTGIYSGEGGMLPEEQSENSRYFYELAS--------GRFGISWTGFRRSI- 140 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-----DVPLLLKE 190 + L P I P + + S+I + + VP+ K Sbjct: 141 -----------LKMAKGLEPGTSAISPPRFHEWTGV-SQIKEFADEVRDKTGGVPIGYKL 188 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + DI+ L G+ Y + GRG ++ + RD + +PT +L Sbjct: 189 SAQHI-KKDIDAALAEGVDYVILDGRGDSTGAAPIIFRD----------NISVPTIPALA 237 Query: 251 MARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 AR + + + + +GGLR D +K++ LGA +++ ++ Sbjct: 238 RARRHLDKLGRSDVTLVITGGLRKPADFIKAMALGADAIAVSNSAMQA 285 >gi|118579168|ref|YP_900418.1| glutamate synthase (ferredoxin) [Pelobacter propionicus DSM 2379] gi|118501878|gb|ABK98360.1| glutamate synthase (ferredoxin) [Pelobacter propionicus DSM 2379] Length = 1507 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 89/267 (33%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + +EVD V GK P+L S+M+ G+ E R A AA + + Sbjct: 838 VDPEEVDTRV---GKH-DLPILFSAMSFGSQ--GETPFRIYAEAARRLNIICMNGEGGEI 891 Query: 89 AMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 A +G R A F + L +G + G + + Sbjct: 892 ADMLGRYRENRGQQIASGRFGVTMAYLNSVDFLEIKVGQGAKPGEGGHLPGFKVTPKI-- 949 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIE 201 H P +I P+ N + + +A + + + +K + Sbjct: 950 -AEARHATPGVSLISPSNNHDIYSIED-LAQIVEELRTANPVARISVKVPAVAGIATIAL 1007 Query: 202 LGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G I+G GGT + R + + G+ + + + Sbjct: 1008 GIAKAGADIITISGYDGGTG-----AARKHAIKFVGLPAEIGVREAHCALVQAGMRDRVE 1062 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG R G D+LK ++LGA+ G Sbjct: 1063 LWADGGARTGRDVLKLMLLGANRVGFG 1089 >gi|255693918|ref|ZP_05417593.1| dihydroorotate dehydrogenase family protein [Bacteroides finegoldii DSM 17565] gi|260620283|gb|EEX43154.1| dihydroorotate dehydrogenase family protein [Bacteroides finegoldii DSM 17565] Length = 325 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 101/289 (34%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSVGK--NKKLAEDGAGAIVLKSLFEEQIMLEAEQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEGSDYLAEYIREHKLSEYLTLIKESKKVCPIPIIASINCYSDSEWVDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD + +++ LQ IQ + + + + +P+++K + + I+ Sbjct: 120 EAGADAIEINILALQSDIQYTYGSFEQRHIDILRHIKKTVSIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE + ++ D G P + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIEKMEHISGEVFSTVADLGTP-LRWIGIASAAVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANAEAVVKAILAGASAVEVCSAIYQNTNAFIGEANRFLSAWME 287 >gi|298530273|ref|ZP_07017675.1| Glutamate synthase (ferredoxin) [Desulfonatronospira thiodismutans ASO3-1] gi|298509647|gb|EFI33551.1| Glutamate synthase (ferredoxin) [Desulfonatronospira thiodismutans ASO3-1] Length = 1521 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 114/356 (32%), Gaps = 77/356 (21%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 D+VD SV G+ PL+I++M+ G+ E R A+AA K + G Sbjct: 861 DQVDISV---GRH-DLPLVIAAMSFGSQ--GENSFRAYAMAAMKANIICMNGEGG---EI 911 Query: 102 HNAIKSFELRQ---------------YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + + F + L +G + G + ++ Sbjct: 912 PDMLGGFRHNRGQQIASGRFGVFMGLLNSTDFLEIKIGQGAKPGEGGHLPGSKVSPMV-- 969 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS----SAMDVPLLLKEVGCGLSSMDIEL 202 P +I P+ + + ++ + + +K Sbjct: 970 -AQARKCKPGITLISPSNQHDIYSIEDLAQTITELKTAHPRARVSVKIPVTSGVGTIAVG 1028 Query: 203 GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 K+G +++G GGT + R+ + + G+ + ++ + Sbjct: 1029 IAKAGADIINLSGYEGGTG-----AAREHAKRYVGLPVEIGVSRAHQALVESALRHKVEL 1083 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL------------------------------ 291 GG+RNG +I+K I+LGA+ GL + L Sbjct: 1084 WCDGGVRNGHEIIKLILLGANRVGLGTLALMGIGCISCRRCHLDRCPMGISTQLRTSEEA 1143 Query: 292 ----------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + A ++ + + ++ E + + +G K + +L T L+ + Sbjct: 1144 KEKGVKSFRPRTAEVEAENLARLLGAIGDEMRMRLARMGQKNLSDLTGRTDLLFQE 1199 >gi|126696506|ref|YP_001091392.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9301] gi|126543549|gb|ABO17791.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9301] Length = 387 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L +M+VP++ G ++ +L + +G+ + G + + Sbjct: 178 NIKDLCQSMNVPVVA---GNCVTYEVAKLLMNAGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ N+ I GG+ G DI K + GA Sbjct: 224 -SRGVLGIGIPQATAIADCSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPIAKSSNAPGKGFHWGMATPSPVLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQEVEIVI 366 >gi|33861618|ref|NP_893179.1| inositol-5-monophosphate dehydrogenase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634195|emb|CAE19521.1| putative IMP dehydrogenase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 387 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L ++ +P++ G ++ +L +K+G+ + G + + Sbjct: 178 NIKSLCKSLKIPVVA---GNCVTYEVADLLMKAGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ ++ IA GG+ G DI K + GA Sbjct: 224 -SRGVLGIGIPQATAISDCSSARDDYFEETGRYVPIIADGGIITGGDICKCLACGADAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPIAKSSSAPGNGFHWGMATPSPILPRGTRIEVGSTGSLERIIKGPALLDDGTHNLIG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQKVEIVI 366 >gi|253572882|ref|ZP_04850280.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 1_1_6] gi|251837514|gb|EES65607.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 1_1_6] Length = 326 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 94/270 (34%), Gaps = 41/270 (15%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + N+ LA A V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSAGK--NKRLAEAGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLAEYLTLIKESKKECNIPIIASINCYSDAEWIDFAKQIQ 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDVQYTYGSFEQRHIDILRHIKRTVSIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLE-------SDIGIVFQDWGIPTPLSLEMARP 254 +G + R IE+ + +D+ + GI A Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIENMEQISGAVFSTSADLATPLRWIGI--------ASS 231 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + ASGG+ N ++K+I+ GA+ Sbjct: 232 VVDKIDYAASGGVSNPEAVVKAILAGATAV 261 >gi|15643163|ref|NP_228207.1| glutamate synthase, alpha subunit [Thermotoga maritima MSB8] gi|148269661|ref|YP_001244121.1| glutamate synthase (NADPH) [Thermotoga petrophila RKU-1] gi|170288336|ref|YP_001738574.1| glutamate synthase (NADPH) [Thermotoga sp. RQ2] gi|281411629|ref|YP_003345708.1| glutamate synthase (NADPH) [Thermotoga naphthophila RKU-10] gi|4980901|gb|AAD35482.1|AE001719_8 glutamate synthase, alpha subunit [Thermotoga maritima MSB8] gi|147735205|gb|ABQ46545.1| glutamate synthase (NADPH) GltB2 subunit [Thermotoga petrophila RKU-1] gi|170175839|gb|ACB08891.1| Glutamate synthase (NADPH) [Thermotoga sp. RQ2] gi|281372732|gb|ADA66294.1| Glutamate synthase (NADPH) [Thermotoga naphthophila RKU-10] Length = 507 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 110/345 (31%), Gaps = 66/345 (19%) Query: 44 VDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 157 VKLKTEIAPQLKLEVPVMFTAMSYGSISLNAIL--SLARAARTVGTFFNTGEGGLPKELR 214 Query: 103 NAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGLF 150 + ++ + + + N G AV++ G + + + + Sbjct: 215 EFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMIP 274 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGI 208 + + L + + DL I + A P+ +K + +++G Sbjct: 275 VGTDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGAVRAGA 333 Query: 209 RYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQF 261 Y I G RGGT + + RD GIP ++ + E A Sbjct: 334 DYIVIDGIRGGT-GAAPKITRDH----------VGIPIEFAVAVVDQRLREEGIRHMASI 382 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPA--------------------------- 294 + +GG+RN D++K+I LGA + + L Sbjct: 383 VVAGGIRNSADVIKAIALGADAVYIGTAALISLGCHLCQTCYLGKCNWGIATQDPKLTKR 442 Query: 295 ---MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E + +G ++ L N ++R Sbjct: 443 LNPEIGARRAANLLRAWAHEIKEILGGMGINAIESLRGNREVLRG 487 >gi|22537245|ref|NP_688096.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus agalactiae 2603V/R] gi|45476927|sp|Q8DZL4|GUAC_STRA5 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|22534112|gb|AAM99968.1|AE014241_19 guanosine monophosphate reductase [Streptococcus agalactiae 2603V/R] Length = 327 Score = 65.7 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 86/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV+ P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVI-------PANMQTIIDEEVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 +A + + K F +++ ++ S +G YDF A + Sbjct: 59 -TLACEGYFYIMHRFNEEERKPF-IKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + E+IQ + + ++ G + + Sbjct: 117 TIDIAHGHSNSVIEMIQ---------------HIKQELPETFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V + ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVEGQQFKE 254 >gi|53714240|ref|YP_100232.1| dihydroorotate dehydrogenase 2 [Bacteroides fragilis YCH46] gi|52217105|dbj|BAD49698.1| putative dihydropyrimidine dehydrogenase [NADP+] precursor [Bacteroides fragilis YCH46] Length = 324 Score = 65.7 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQ 95 D F G L P++ISS +G N + N L A + ++ M Sbjct: 3 DLKTTFAGLTLKNPVIISS-SGLTNSAAK--NAKLEAAGAGAIVLKSLFEEQIMMEADRL 59 Query: 96 RV-------------MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 R +H + EL + + I + ++ D + + Sbjct: 60 RNPSYYPEGSDYLAEYIRNHKLAEYLELIKESKKVCTIPVIASINCYTDAEWVDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ IQ + ++ + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDIQYKYGSFEQRHIDILSHIKKTIHIPVIMKLGSNFTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R +E D+ D T + ++ ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDIDVEKMEHTSGDVFSNASDLS-TTLRWIGISSSLVSKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG 284 ASGG+ I+K+I+ GAS Sbjct: 239 AASGGIHKPDGIVKAILAGASAI 261 >gi|265766268|ref|ZP_06094309.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_1_16] gi|263253936|gb|EEZ25401.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_1_16] Length = 324 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQ 95 D F G L P++ISS +G N + N L A + ++ M Sbjct: 3 DLKTTFAGLTLKNPVIISS-SGLTNSAAK--NAKLEAAGAGAIVLKSLFEEQIMMEADRL 59 Query: 96 RV-------------MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 R +H + EL + + I + ++ D + + Sbjct: 60 RNPSYYPEGSDYLAEYIRNHKLAEYLELIKESKKVCTIPVIASINCYTDAEWVDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ IQ + ++ + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDIQYKYGSFEQRHIDILSHIKKTIRIPVIMKLGSNFTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R +E D+ D T + ++ ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDIDVEKMEHTSGDVFSNASDLS-TTLRWIGISSSLVSKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG 284 ASGG+ I+K+I+ GAS Sbjct: 239 AASGGIHKPDGIVKAILAGASAI 261 >gi|78221374|ref|YP_383121.1| glutamate synthase (ferredoxin) [Geobacter metallireducens GS-15] gi|78192629|gb|ABB30396.1| glutamate synthase (ferredoxin) [Geobacter metallireducens GS-15] Length = 1510 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 89/265 (33%), Gaps = 29/265 (10%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + DEVD SV + P+L S+M+ G+ E R A AA++ + Sbjct: 841 VDPDEVDTSV----GDHTLPILFSAMSFGSQ--GETPFRIYAEAAKRLNIVCMNGEGGEI 894 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A +G R A F + ++ + Q G V Sbjct: 895 ADMLGQYRKNRGQQIASGRFGVNMAFLNSADFLEIKVGQ-GAKPGEGGHLPGFKVTAKIA 953 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 H P +I P+ N + + +A + + + +K Sbjct: 954 AARHATPGVSLISPSNNHDIYSIED-LAQIVEELRTANPTARISVKVPAVAGIGTIALGV 1012 Query: 204 LKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+G I+G GGT + R + + G+ ++ + + Sbjct: 1013 AKAGADIITISGYDGGTG-----AARKHAIKFVGLPAEIGVSEAHKALVSAGMRQKVEIW 1067 Query: 263 ASGGLRNGVDILKSIILGASLGGLA 287 A GG R G D++K ++LGA+ G Sbjct: 1068 ADGGARTGRDVVKLMLLGANRVGFG 1092 >gi|255261498|ref|ZP_05340840.1| ferredoxin-dependent glutamate synthase [Thalassiobium sp. R2A62] gi|255103833|gb|EET46507.1| ferredoxin-dependent glutamate synthase [Thalassiobium sp. R2A62] Length = 510 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 101/295 (34%), Gaps = 40/295 (13%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 +DD ++ + P + V SV + L PL +S M+ G ++ Sbjct: 142 WDDIQILPAQMARKPLLDDQRVTTSVTIGPRAAKPLHLDIPLFVSDMSFGALSEEAKV-- 199 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLNYDF 132 LA AE + G + M ++ A + + A L+ + A Sbjct: 200 ALARGAEMAGTGICSG-EGGMLAEEQAENTRYFYELASARFGWRPELVDKVQAFHFKGGQ 258 Query: 133 GVQKA----HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA---DLSSKIALLSSAMD-V 184 G + V G L P Q I P + D + D + Sbjct: 259 GAKTGTGGHLPGGKVQGKIAEVRGLEPGQSAISPATFPDLHTPADFQKIADEVRERSDGI 318 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+ K + DI+ L++ Y GRGG + + RD S +P Sbjct: 319 PIGFKLSANHIE-DDIDFALEASADYTIFDGRGGGTGAAPLIFRDHIS----------VP 367 Query: 245 TPLSLEMARPYCN-----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +L AR + + E + +GGLR D K++ LGA +++ ++ Sbjct: 368 KIPALARARAHLDAKTGLEVTLVITGGLRVAEDFAKAMALGADAVAVSNAAMQAV 422 >gi|158423124|ref|YP_001524416.1| glutamate synthase family protein [Azorhizobium caulinodans ORS 571] gi|158330013|dbj|BAF87498.1| glutamate synthase family protein [Azorhizobium caulinodans ORS 571] Length = 444 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSS---KIALLSS--AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ KI L + P+ +K VG DI L +KSG + G +G Sbjct: 203 RHPDWTGPDDLEIKIEELRELTDWEKPIYVK-VGASRPYYDISLAVKSGADVVVLDGMQG 261 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIP ++ A + Q I SGG+RNG Sbjct: 262 GT-----------AATQDVFIEHVGIPILAAIRPAVQALKDLGMHRKVQLIVSGGIRNGA 310 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 311 DVAKALALGADAVAIGTAALVAL 333 >gi|218130109|ref|ZP_03458913.1| hypothetical protein BACEGG_01696 [Bacteroides eggerthii DSM 20697] gi|317476601|ref|ZP_07935846.1| dihydroorotate dehydrogenase 2 [Bacteroides eggerthii 1_2_48FAA] gi|217987613|gb|EEC53941.1| hypothetical protein BACEGG_01696 [Bacteroides eggerthii DSM 20697] gi|316907197|gb|EFV28906.1| dihydroorotate dehydrogenase 2 [Bacteroides eggerthii 1_2_48FAA] Length = 325 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 104/313 (33%), Gaps = 48/313 (15%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P++ISS +G + + N+ L A + ++ M Sbjct: 4 LETTFAGLKLRNPIIISS-SGLTDSAAK--NQKLYEAGAGAIVLKSLFEEQIMMEADWLG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 +H + L + + I + ++ D + + + Sbjct: 61 DPNMYPEGSDYLVGYIREHKLGEYLNLIKESKKVCDIPIIASINCYQDADWIEFAKKIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q ++ + +++P+++K + + I+ Sbjct: 121 AGADALEVNILALQTDVQYTYGAFEQRHIDILSHIKKTVNIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRD-------LESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE ++D+ + GI A Sbjct: 181 LYANGAAAVVMFNRFYQPDIDIEKMAQSAGNVFSTDADLSKSLRWIGI--------ASAA 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 N+ + ASGG+ ++K+I+ GAS +S AV++ Sbjct: 233 VNKLDYAASGGIHAPEGVVKAILAGASAV----ELCSALYLNSYAVISEYTRF---LNTW 285 Query: 316 MFLLGTKRVQELY 328 M G + + + Sbjct: 286 MDRKGMENINQFK 298 >gi|317153236|ref|YP_004121284.1| glutamate synthase (NADPH) [Desulfovibrio aespoeensis Aspo-2] gi|316943487|gb|ADU62538.1| Glutamate synthase (NADPH) [Desulfovibrio aespoeensis Aspo-2] Length = 508 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 92/270 (34%), Gaps = 51/270 (18%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFSDHNAIKS-- 107 +L P++ ++M+ G IN NL A AA + G + S + K+ Sbjct: 171 ELDVPIMFAAMSFGA------INFNLHQAMARAATEMGTVYNTGEGGLHKSLYKYGKNTI 224 Query: 108 -------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNP 155 F + + + Q + +K + V + Sbjct: 225 VQVASGRFGVHLDYLKAGVGIEIKVGQGAKPGIGGHLPGEKINNMVSETRMVPI------ 278 Query: 156 LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I P + + + + L+ +S VP+ +K + +++G Sbjct: 279 GSDAISPAPHHDIYSIEDLLQLIFALKEASEYKVPVAVKIAAVHNVAAIASGIVRAGADI 338 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIAS 264 I G G + + RD + GIP L+L N+A +A+ Sbjct: 339 VTIDGMRGGTGAAPAMIRD----------NVGIPIELALAQVDQRLRDEGIRNQASIVAA 388 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA 294 GG+R D++K+I LGA + + L Sbjct: 389 GGIRCSADVVKAIALGADAVYIGTATLIAV 418 >gi|154248615|ref|YP_001419573.1| ferredoxin-dependent glutamate synthase [Xanthobacter autotrophicus Py2] gi|154162700|gb|ABS69916.1| ferredoxin-dependent glutamate synthase [Xanthobacter autotrophicus Py2] Length = 445 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSS---KIALLSS--AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ KI L + P+ +K VG DI L +K+G + G +G Sbjct: 203 RHPDWTGPDDLEIKIEELRELTDWEKPIYVK-VGASRPYYDIALAVKAGADVVVLDGMQG 261 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + ++ G+P ++ A + Q I SGG+R+G Sbjct: 262 GT-----------AATQDVFIENVGLPILGAIRPAVQALQDLGMHRKVQLIVSGGIRSGA 310 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ ++L Sbjct: 311 DVAKALALGADAVAIGTAALVALGDNDPQWEDEYQAL 347 >gi|218885650|ref|YP_002434971.1| glutamate synthase (NADPH) [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756604|gb|ACL07503.1| Glutamate synthase (NADPH) [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 507 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 90/269 (33%), Gaps = 51/269 (18%) Query: 55 LSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFSDHNAIKS--- 107 L +P++ ++M+ G IN NL A AA + + G + + + Sbjct: 171 LEYPIMFAAMSFGA------INFNLHVAMARAATQLGICYNTGEGGLHPDLYQYGANTIV 224 Query: 108 ------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + + + + Q + +K + V + Sbjct: 225 QVASGRFGVHKDYLNAGAAVEIKVGQGAKPGIGGHLPGEKIDEEVSRTRM------VPQG 278 Query: 157 QEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + I P + + + + L+ S+ VP+ +K + +++G Sbjct: 279 SDAISPAPHHDIYSIEDLLQLIYAIKESTRYRVPVAVKIAAVHNAPAIASGIVRAGADIV 338 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASG 265 I G G + + RD + GIP L+L N A + +G Sbjct: 339 VIDGFRGGTGAAPTMIRD----------NVGIPIELALASVDNRLRDEGIRNHASLVVAG 388 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA 294 G+R D++K+I LGA + + L Sbjct: 389 GVRCSADVVKAIALGADAVYIGTAALVAV 417 >gi|296132235|ref|YP_003639482.1| Glutamate synthase (NADPH) [Thermincola sp. JR] gi|296030813|gb|ADG81581.1| Glutamate synthase (NADPH) [Thermincola potens JR] Length = 500 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 98/332 (29%), Gaps = 59/332 (17%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS----- 107 +L P++ ++M+ G+ + I +LA AA++ G + S + + Sbjct: 162 LELEVPIMFAAMSFGSI-SLNAIT-SLARAAKEVGTYFNTGEGGLHKSLYEFGDNCIVQV 219 Query: 108 ----FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAV---HVLGADGLFLHLNP 155 F + + Q + +K + V ++ + P Sbjct: 220 ASGRFGVHPEYLKAGKAIEIKVGQGAKPGIGGHLPGEKVGKQVSETRMIPEGTDAISPAP 279 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +I + P+ +K + ++G I G Sbjct: 280 HHDIYSIEDLRQLIFALKEATNYEK----PVSVKIAAVHNVAAIASGIARAGADIIAIDG 335 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 RGGT + + + + I S A N+ + SGG+RN D++ Sbjct: 336 IRGGTGATPLRTRDSVGIPIEFALA-----AVDSRLRAEGIRNQVSIVISGGIRNSSDVV 390 Query: 275 KSIILGASLGGLASPFLKPA------------------------------MDSSDAVVAA 304 K+I LGA + S L + Sbjct: 391 KAIALGADAVYIGSAALIALGCHMCQTCYSGKCNWGIATQNPNLVKRLNPDIGARRAANL 450 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ E + +G ++ L N ++R Sbjct: 451 LKAWGHEIKELLGGMGINALESLRGNRLMLRG 482 >gi|253564756|ref|ZP_04842212.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 3_2_5] gi|251946221|gb|EES86598.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 3_2_5] gi|301163770|emb|CBW23325.1| putative dihydroorotate dehydrogenase [Bacteroides fragilis 638R] Length = 324 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQ 95 D F G L P++ISS +G N + N L A + ++ M Sbjct: 3 DLKTTFAGLTLKNPVIISS-SGLTNSAAK--NAKLEAAGAGAIVLKSLFEEQIMMEADRL 59 Query: 96 RV-------------MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 R +H + EL + + I + ++ D + + Sbjct: 60 RNPSYYPEGSDYLAEYIRNHKLAEYLELIKESKKICTIPVIASINCYTDAEWVDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ IQ + ++ + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDIQYKYGSFEQRHIDILSHIKKTIRIPVIMKLGSNFTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R +E D+ D T + ++ ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDIDVEKMEHTSGDVFSNASDLS-TTLRWIGISSSLVSKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG 284 ASGG+ I+K+I+ GAS Sbjct: 239 AASGGIHKPDGIVKAILAGASAI 261 >gi|60682297|ref|YP_212441.1| dihydroorotate dehydrogenase 2 [Bacteroides fragilis NCTC 9343] gi|60493731|emb|CAH08520.1| putative dihydroorotate dehydrogenase [Bacteroides fragilis NCTC 9343] Length = 324 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQ 95 D F G L P++ISS +G N + N L A + ++ M Sbjct: 3 DLKTTFAGLTLKNPVIISS-SGLTNSAAK--NAKLEAAGAGAIVLKSLFEEQIMMEADRL 59 Query: 96 RV-------------MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 R +H + EL + + I + ++ D + + Sbjct: 60 RNPSYYPEGSDYLAEYIRNHKLAEYLELIKESKKICTIPVIASINCYTDAEWVDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ IQ + ++ + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDIQYKYGSFEQRHIDILSHIKKTIRIPVIMKLGSNFTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R +E D+ D T + ++ ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDIDVEKMEHTSGDVFSNASDLS-TTLRWIGISSSLVSKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG 284 ASGG+ I+K+I+ GAS Sbjct: 239 AASGGIHKPDGIVKAILAGASAI 261 >gi|320451108|ref|YP_004203204.1| glutamate synthase, NADPH, large subunit [Thermus scotoductus SA-01] gi|320151277|gb|ADW22655.1| glutamate synthase, NADPH, large subunit [Thermus scotoductus SA-01] Length = 1492 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 128/372 (34%), Gaps = 83/372 (22%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN---------KMIERINRN 78 + R+ E+S +EVD SV G S P LIS+M+ G+ + +R+N Sbjct: 815 EVRFPERS--EVSPEEVDLSV--GGH--SLPFLISAMSFGSQGEASFRAYVEAAKRLNM- 867 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQK 136 L I E ++ +G A F + Y V+ +G + G Sbjct: 868 LCINGEGGEIPDMLGKYTHWRGQQVASGRFGVHAYMLNSAAVIEIKIGQGAKPGEGGHLP 927 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS----------AMDVPL 186 + + A + P ++I P+ N + + L+ ++ VP+ Sbjct: 928 GKKVSPKVAAARNAV---PGVDLISPSNNHDLYSIEDLAQLIEELKTVNPKALVSVKVPV 984 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + G+ ++ + + K+G ++G GGT + R + + G+ Sbjct: 985 I-----PGIGTIAVGIA-KAGADVITLSGFEGGTG-----AARLHALKYAGLPVEIGVRR 1033 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + + + A GGL+ D+L+ ++LGA G+A+ Sbjct: 1034 AHRALVRAGLRDRVEIWADGGLKTAYDVLRMVLLGADRVGMATMAMVAIGCTICRGCQLD 1093 Query: 289 ----------PFLKPAMDSS-------------DAVVAAIESLRKEFIVSMFLLGTKRVQ 325 L+ A+ + + E+ + + LG + ++ Sbjct: 1094 TCHVGITTQIETLEEALAHGLKRFVPQDLDRAVEHLTRFFEAKGEALRELVAALGARSLR 1153 Query: 326 ELYLNTALIRHQ 337 EL L+ + Sbjct: 1154 ELRGRVDLLYQR 1165 Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL----KPAMDSSDAVVAAIESLRKEFIVSM 316 + SGG+RN D+ + LGA P+L A++ V +E+LRK + Sbjct: 648 LVHSGGVRNLHDVAFLLGLGAEAVA---PWLLEEKARALEGRKGVANVLEALRKGLEKVI 704 Query: 317 FLLGTKRVQELY 328 +G + EL Sbjct: 705 STMG---IHELR 713 >gi|126460213|ref|YP_001056491.1| glutamate synthase (NADPH) GltB2 subunit [Pyrobaculum calidifontis JCM 11548] gi|126249934|gb|ABO09025.1| glutamate synthase (NADPH) GltB2 subunit [Pyrobaculum calidifontis JCM 11548] Length = 693 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 115/374 (30%), Gaps = 62/374 (16%) Query: 12 IVCKDPGIDRNKKFFDDWHL-------IHRALPEISFDEVDPSVEFLGKKLSFPLLISSM 64 +P R + D ++ L + +VD ++F G +LS P+ + M Sbjct: 42 YALSEPR--RVGRLLDRISFKDLRPREVNELLEKADKLDVDVGMDFFGTRLSVPIYVGDM 99 Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHN----AIKSFELRQYAPHTVLI 120 + G + N +A A + +G + ++ R +L Sbjct: 100 SFGA--LSGNPNIAIAKAVTEFGAVAGIGEGGLHPEVAKYRNIVVQWASARFGMGLDLLR 157 Query: 121 SNLGAVQLNYDFGVQKA-------HQAVHVLGADGLFLHLNPLQEIIQPNGNTNF---AD 170 + L AV + G + + V ++ + + + P + + D Sbjct: 158 AGL-AVNIKIGQGAKPGIGGHLPGRKVVDII---AQLRKIPKGSDALSPAPHHDIYSIED 213 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 L+ ++ L P+L+K +S I G G + + + R+ Sbjct: 214 LAQRVKALRDISKKPVLVKVAAVNKIMYVAVGVARSTAEGIIIDGAGAGTGATPLAIRNH 273 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + D+ IP + I G L + D+ K I LGA + + + Sbjct: 274 LG----IPIDYAIPVVHEWLRKNGVRDNFLVIGGGMLFSAEDVAKLIALGADMANIGTAA 329 Query: 291 L---------------------KPAMDSSD--------AVVAAIESLRKEFIVSMFLLGT 321 L + + +++L ++ LG Sbjct: 330 LLSFGCIMCHACHTGGCPTALTNLIGYGKELDIEWAAGNLKNYLKALEAGLKAIVYALGF 389 Query: 322 KRVQELYLNTALIR 335 V+EL L++ Sbjct: 390 SSVRELVGRKDLLK 403 >gi|189501366|ref|YP_001960836.1| Glutamate synthase (NADPH) [Chlorobium phaeobacteroides BS1] gi|189496807|gb|ACE05355.1| Glutamate synthase (NADPH) [Chlorobium phaeobacteroides BS1] Length = 529 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 92/253 (36%), Gaps = 36/253 (14%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY- 113 L P+ +S M+ G ++ L+ + + K AM G ++ A + Sbjct: 202 LDSPVFVSHMSFGALSREAKL--ALSRGSARVKTAMCSGEGGILPESLEASWKYIFEYVP 259 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD----------GLFLHLNPLQEIIQPN 163 ++V NL V ++ A +G Q+II P+ Sbjct: 260 NKYSVTDENLSRVDAVE---IKIGQSAKPGMGGHLPGNKVTREIASIRGFREGQDIISPS 316 Query: 164 GNTNFA---DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 + DL + + L P+ +K + G DI++ L +G+ + I GR G Sbjct: 317 RFPDIRTKDDLKATVDHLREKTGGKPVGIK-LAAGHIEEDIDIALYAGVDFITIDGRAGG 375 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-----CNEAQFIASGGLRNGVDIL 274 + + + ++ S +PT +L AR + I +GGLR D Sbjct: 376 TGASPKVVKNAAS----------VPTIFALFRARKVLDARGADRVSLIITGGLRVSSDFA 425 Query: 275 KSIILGASLGGLA 287 K++ +GA + Sbjct: 426 KALAMGADAIAVG 438 >gi|37521172|ref|NP_924549.1| inosine 5-monophosphate dehydrogenase [Gloeobacter violaceus PCC 7421] gi|35212168|dbj|BAC89544.1| IMP dehydrogenase [Gloeobacter violaceus PCC 7421] Length = 385 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 102/379 (26%), Gaps = 99/379 (26%) Query: 25 FFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---------------- 66 D+ L+ R L D D P++ S+M G Sbjct: 16 GIDEIALVPGRRTL---DPDLADTGWTIGNVTREIPIIASAMDGVVDVKMAVELSRLGAL 72 Query: 67 ------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFELRQYAPHTV 118 G E LA A K A Q + I+ + + Sbjct: 73 GVINLQGVQTRYENPTEVLARIASVGKEAFVGLMQELYAEPVKPELIR-RRIEEIKAQGG 131 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL 178 + Q+ +G A + +Q + + + + +A Sbjct: 132 IACASATPQVAGQYGPIAAEAGCDLF----------FVQATVVSTAHLSSHETLD-LAEF 180 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 +AM +P++L G ++ +++G + G + + Sbjct: 181 CAAMPIPVVL---GNVVTYEVALDLMQAGAAAVLVGIGPGAACT------------SRGV 225 Query: 239 QDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 GIP ++ ++ IA GGL G DI K I GA + SPF Sbjct: 226 LGVGIPQATAVSDCAAARDDYFAQTGRYVPVIADGGLVTGGDICKCIACGADGVMIGSPF 285 Query: 291 LKPA-----------------------------------MDSSDAVVAAIESLRKEFIVS 315 + A + + +L S Sbjct: 286 ARAAEAPGNGFHWGMATPSPVLPRGTRIKVGTTGTLAEILRGPARLDDGTHNLLGSLKTS 345 Query: 316 MFLLGTKRVQELYLNTALI 334 M LG K ++E+ ++ Sbjct: 346 MGTLGAKDLKEMQQVEVVV 364 >gi|126740283|ref|ZP_01755972.1| glutamate synthase family protein [Roseobacter sp. SK209-2-6] gi|126718738|gb|EBA15451.1| glutamate synthase family protein [Roseobacter sp. SK209-2-6] Length = 447 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L +K+G + G +G Sbjct: 206 RHPDWTGPDDLEIKILELREITNWEKPIYVK-VGGTRPYYDTALAVKAGADVVVLDGMQG 264 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A + Q + SGG+R G Sbjct: 265 GT-----------AATQDVFIEHVGLPTLACIRPAVQALQDLGVHREVQLVVSGGIRTGA 313 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + + D+ + L Sbjct: 314 DVAKAMALGADAVSIGTAAMVAIGDNDPKWEEEYQKL 350 >gi|170692873|ref|ZP_02884035.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein [Burkholderia graminis C4D1M] gi|170142529|gb|EDT10695.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein [Burkholderia graminis C4D1M] Length = 124 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESL 308 E+ + GG R G DILK++ LGA L V AI+ L Sbjct: 6 EVVEQAGGRLCVMLDGGFRRGTDILKAVALGADAVLLGRATTYGLSAGGQPGVERAIDIL 65 Query: 309 RKEFIVSMFLLGTKRVQELYLN 330 + E ++ LLG + + EL + Sbjct: 66 KTEIDRALGLLGCRDIAELDRS 87 >gi|320536899|ref|ZP_08036891.1| dehydrogenase, FMN-dependent [Treponema phagedenis F0421] gi|320146255|gb|EFW37879.1| dehydrogenase, FMN-dependent [Treponema phagedenis F0421] Length = 305 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 31/248 (12%) Query: 62 SSMTGGNNKMIERINRNLA----IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 + +TGG + + AA + + +++G + I L+QY Sbjct: 80 APITGGVENIGYPNEEDFYFDVIEAALEAGIRLSIGDGCPDIKLQSGIA--ALKQYRAKA 137 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + + + A + ++G D ++ ++ ++ + + Sbjct: 138 AVFIK-PYPNKKFFERIDWAREQAEIIGIDIDSYNIVTMRNLVNLE-----KKNAQNLQA 191 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L P +K + + DIE I+ GG IE+ R ++ Sbjct: 192 LQRYAHRPFAVKGI---FTDDDIETMRDLKPDIIVISNHGGR----IETRRGSTANFLAA 244 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 + R YC E GGLR D+L + LGAS L P + + Sbjct: 245 HG----------KELRQYCGE--LWVDGGLRCKADLLAAKALGASQIMLGRPCITALLRY 292 Query: 298 SDAVVAAI 305 + + + Sbjct: 293 GKSGIKRM 300 >gi|119720045|ref|YP_920540.1| ferredoxin-dependent glutamate synthase [Thermofilum pendens Hrk 5] gi|119525165|gb|ABL78537.1| ferredoxin-dependent glutamate synthase [Thermofilum pendens Hrk 5] Length = 463 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 112/345 (32%), Gaps = 72/345 (20%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 F +V+ G K S PL++ +M G+ + R + +A AA K + +G Sbjct: 105 FTDVNLETSIGGLKSSMPLVVGTM--GSTDIASRYSLVIARAAAKEGIPYGIGENVHTIR 162 Query: 101 DHNAI-----KSFELR--------QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 ++ SF+ R ++ N+ + V L Sbjct: 163 GYDRRLTRGHPSFKERVMAYLTNIDKYGGVIIQQNVEDAYDEHWNKVYSDKDLEPYLDEG 222 Query: 148 GLFLHLNPLQ---------------EIIQPNGNTNF----------------------AD 170 + + Q E ++ +F AD Sbjct: 223 RVAFEIKVGQGAKPGLGGVIKMRKEEAVKVKEKYHFLEDPAEARTAWVERYSAPGTYTAD 282 Query: 171 LSSKIALLSSAM--DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESH 227 + + L + +K +++ + G I G+ GGT + + Sbjct: 283 ILRGMIRLMKTSYPRAKVWIKVGPFRDVLEVVKVSYEEGADAVIIDGKEGGTGMAPSVAM 342 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGAS 282 ++L G PT + L R + + +G L NG I+K+ LGA+ Sbjct: 343 KEL-----------GYPTVVGLAKIRKARLMGVDDRMSLLLAGRLFNGAHIVKARALGAT 391 Query: 283 LGGLASPFLKPAMDSSDA-VVAAIESLRKEFIVSMFLLGTKRVQE 326 + PF+ AM +A V IE+ R E + + LG + + Sbjct: 392 AIYVGRPFIVAAMVKDEAGVRNFIEATRVETQMIVSALGKYSIGD 436 >gi|298386605|ref|ZP_06996161.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 1_1_14] gi|298260982|gb|EFI03850.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 1_1_14] Length = 326 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 41/270 (15%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + N+ LA A V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSAGK--NKRLAEAGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLAEYLTLIKESKKECNIPIIASINCYSDAEWIDFAKQIQ 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDVQYTYGSFEQRHIDILRHIKRTVSIPVIMKLGDNLTNPVALID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLE-------SDIGIVFQDWGIPTPLSLEMARP 254 +G + R IE+ + +D+ + GI A Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIENMEQISGAVFSTSADLATPLRWIGI--------ASS 231 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + ASGG+ + ++K+I+ GA+ Sbjct: 232 VVDKIDYAASGGVSSPEAVVKAILAGATAV 261 >gi|33240588|ref|NP_875530.1| inositol-5-monophosphate dehydrogenase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238116|gb|AAQ00183.1| IMP dehydrogenase/GMP reductase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 387 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 53/393 (13%), Positives = 110/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---- 66 NI R D+ L+ + + D ++ GK L P++ S+M G Sbjct: 2 NIQLGHSKFVRRAYGIDEIALVPGG-KTVDPENTDTTLLIGGKSLEIPIIASAMDGVVDV 60 Query: 67 ------------------GNNKMIERINRNLAIAA---EKTKVAMAVGSQRVMFSDHNAI 105 G E+ N L + ++ V + + ++ Sbjct: 61 NMAVALSKLGSLGVLNLEGVQTRYEKPNDVLKRISSVGKEEFVPLMQEIYKQPIKENLIN 120 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE-IIQPNG 164 + +++ L + G F + D F LQ ++ Sbjct: 121 Q--RIQEIKDQGGLAAVSGTPLAAIKF-----KDTITKAKPDLFF-----LQATVVSTEH 168 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 +I+ L + +P++ VG ++ +++G+ + G + + Sbjct: 169 IGGGKQEKLEISNLCQTLGIPVI---VGNCVTYEVALNLMRAGVSGILVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 G+P ++ ++ IA GG+ G D+ K Sbjct: 224 ----------SRGVLGVGVPQATAISDCSAARDDYKKETGNHVPVIADGGIITGGDVCKC 273 Query: 277 IILGASLGGLASPFLKPA-----------------------------------MDSSDAV 301 I GA + SP + + + Sbjct: 274 IACGADGVMIGSPIARASEAPGNGYHWGMATPSPVLPRGTRIKVGSTGNLMQILRGPAKT 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++E+ +I Sbjct: 334 DDGTHNLLGALKTSMGTLGAQTIKEMQEVEIVI 366 >gi|222054417|ref|YP_002536779.1| glutamate synthase (ferredoxin) [Geobacter sp. FRC-32] gi|221563706|gb|ACM19678.1| Glutamate synthase (ferredoxin) [Geobacter sp. FRC-32] Length = 1522 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 89/265 (33%), Gaps = 29/265 (10%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + DEVD +V G P+L S+M+ G+ E R A AA + + Sbjct: 853 VDPDEVDTTV---GCH-DLPILFSAMSFGSQ--GETPFRIYAEAARRLNIVCMNGEGGEI 906 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 A +G R A F + ++ + Q G V Sbjct: 907 ADMLGRYRENRGQQIASGRFGVNMDFLNSADFLEIKVGQ-GAKPGEGGHLPGFKVTAKIA 965 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 + P +I P+ N + + +A + + + +K + Sbjct: 966 AARNATPGVSLISPSNNHDIYSIED-LAQIVEELRTANPRARISVKVPAVAGIATIALGI 1024 Query: 204 LKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+G I+G GGT + R + D G+ + ++ + Sbjct: 1025 AKAGADIITISGYDGGTG-----AARRHAIKFVGLPADIGVSEAHRALVEAGMRHKVEIW 1079 Query: 263 ASGGLRNGVDILKSIILGASLGGLA 287 A GG R G D+LK ++LGA+ G Sbjct: 1080 ADGGARTGRDVLKLMLLGANRVGFG 1104 >gi|317046296|ref|YP_004113944.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] gi|316947913|gb|ADU67388.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Pantoea sp. At-9b] Length = 350 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 103/340 (30%), Gaps = 55/340 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGG---NN 69 D D N + L+ R L + +D L + + P+ + + G ++ Sbjct: 31 ALGDEN-DANHLALRRYRLLPRVLQGN--ETIDTHTTLLNQTWAAPIGVGAFAGDRIFHD 87 Query: 70 KMIERINRNLAIAAEKTKVAMAVG-------SQRVMFSDHNAIKSFELRQYAPHTVLISN 122 + + I A A ++ ++ + + +Q D ++ + A LI Sbjct: 88 EGLLPI----ARACKRLQLPLVISEETVTPLAQIGATYDRCWLQLRAAGEVARIKALIDQ 143 Query: 123 LGAVQL-NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP---------NGNTNFADL- 171 A Q V V L G + + L++ F Sbjct: 144 AAASQFKAIVLTVLAPVHPVAGLQPGGFSV-GDALKQRGWHTIGGTQPGVEALPAFPVWR 202 Query: 172 SSKIALLSSAM---DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +I +++ +PLLLK V L D G+ + G +R + Sbjct: 203 WQQIDEVATHCADHGLPLLLKGV---LHHDDAAPAAAHGVSGLIASNIGLRQSARWVTPV 259 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 D +D+ + GG+R+G D + + LGA+L Sbjct: 260 DQLADL-------------------QAVTRLPLLLDGGIRSGSDAVVARCLGAALSLSVR 300 Query: 289 PFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P + + + AV + G + L Sbjct: 301 PVITALVTGGEAAVFDLLSGWINAISAISHWCGVSDMAAL 340 >gi|332522838|ref|ZP_08399090.1| GMP reductase [Streptococcus porcinus str. Jelinkova 176] gi|332314102|gb|EGJ27087.1| GMP reductase [Streptococcus porcinus str. Jelinkova 176] Length = 327 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 87/285 (30%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ N+A Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVTLGKYNFKLPVI-------PANMQTIIDENIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A A + D A K F R + + ++G YDF A + Sbjct: 59 -QLAKAGYFYIMHRFDEEARKPFIKRMHDQGLIASISVGVKAYEYDFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + + I + S + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVINMIRHIKSQLPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V ES ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGESFKE 254 >gi|219851854|ref|YP_002466286.1| ferredoxin-dependent glutamate synthase [Methanosphaerula palustris E1-9c] gi|219546113|gb|ACL16563.1| ferredoxin-dependent glutamate synthase [Methanosphaerula palustris E1-9c] Length = 492 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 111/328 (33%), Gaps = 64/328 (19%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 + P ++ M+ G +I LA + K + A+ G V+ + + + +Y Sbjct: 165 IDTPFYVTHMSFGALSKETKI--ALAGGSAKVRTAIGSGEGGVLPEEQAQAYRY-IFEYV 221 Query: 115 PH-----TVLISNLGAVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNP-LQEIIQPNGN 165 P+ ++ ++ A+++ + A + + + P +II P Sbjct: 222 PNQYSVTAEMLRSVDAIEIKLGQSAEPGLGARLPGEKVTPEIATVRGYPKGTDIISPARF 281 Query: 166 TNFA---DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTS 220 T+ DL +K+ L P+ +K + G D+E + +G + I GR GGT Sbjct: 282 TDIKTRDDLKTKVTWLREISGGRPVGVK-IAAGHIEADLEAIVYAGADFVTIDGRPGGT- 339 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA-----QFIASGGLRNGVDILK 275 + + +PT +L AR + + +GGLR DI K Sbjct: 340 ----------GAAPKFIKASTSVPTIFALYRARETLDRLGATGTSLVITGGLRISSDIAK 389 Query: 276 SIILGASLGGLASPFLKP------------------------------AMDSSDAVVAAI 305 ++ LGA L + L + +D + + Sbjct: 390 ALALGADAVALGTAALMACGCQQHRICSTGRCPEGLTTQDIDLRPRMKSEVGADRLANFL 449 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTAL 333 E L G V +L + + Sbjct: 450 NVTTAELEDFTRLTGHTNVHDLSRDDLV 477 >gi|222099246|ref|YP_002533814.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] gi|221571636|gb|ACM22448.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] Length = 507 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 109/346 (31%), Gaps = 66/346 (19%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 156 NVALKTEIAPQLKLEVPVMFTAMSYGSISLNALL--SLARAARTIGTFFNTGEGGLPKEL 213 Query: 102 HNAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGL 149 + ++ + + + N G AV++ G + + + + Sbjct: 214 REFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMI 273 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + + L + + DL I + A P+ +K + +++G Sbjct: 274 PVGTDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGMVRAG 332 Query: 208 IRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQ 260 Y I G RGGT + + RD GIP ++ + E A Sbjct: 333 ADYIVIDGIRGGT-GAAPKVTRDH----------VGIPIEFAIAVVDQRLREEGIRHMAS 381 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------------------------- 294 + +GG+RN D++K+I LGA + + L Sbjct: 382 IVVAGGIRNSADVIKAIALGADAVYIGTAALVALGCHLCQTCYLGKCNWGIATQDPKLTK 441 Query: 295 ----MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E + +G ++ L N +R Sbjct: 442 RLNPEIGARRAANLLRAWAHEIKEILGGMGINAIESLRGNREALRG 487 >gi|324997372|ref|ZP_08118484.1| dehydrogenase [Pseudonocardia sp. P1] Length = 418 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 23/163 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A L +P+++K V L D +G ++ GG + D Sbjct: 276 WDDLAGLRERTRLPIVVKGV---LHPDDARRAADAGADGVVVSNHGGRQVDHSVASLDAL 332 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + + G+R G D+ ++ LGA L PF+ Sbjct: 333 PGVAA-----------------AVGDRLAVLLDSGVRTGADVATAVRLGARAVLLGRPFV 375 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ--ELYLNT 331 A+D + V ++++ E ++ L G EL Sbjct: 376 HGLALDGARGVAQVVQNVVAELDLACGLAGATTPAGIELRDRP 418 >gi|25011205|ref|NP_735600.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus agalactiae NEM316] gi|76798432|ref|ZP_00780672.1| guanosine monophosphate reductase [Streptococcus agalactiae 18RS21] gi|77410496|ref|ZP_00786857.1| guanosine monophosphate reductase [Streptococcus agalactiae CJB111] gi|45476928|sp|Q8E578|GUAC_STRA3 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|23095629|emb|CAD46813.1| unknown [Streptococcus agalactiae NEM316] gi|76586227|gb|EAO62745.1| guanosine monophosphate reductase [Streptococcus agalactiae 18RS21] gi|77163444|gb|EAO74394.1| guanosine monophosphate reductase [Streptococcus agalactiae CJB111] Length = 327 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 86/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV+ P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVI-------PANMQTIIDEEVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 +A + + K F +++ ++ S +G YDF A + Sbjct: 59 -TLACEGYFYIMHRFNEEERKPF-IKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + E+IQ + + ++ G + + Sbjct: 117 TIDIAHGHSNSVIEMIQ---------------HIKQELPETFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V + ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGQQFKE 254 >gi|160936237|ref|ZP_02083610.1| hypothetical protein CLOBOL_01133 [Clostridium bolteae ATCC BAA-613] gi|158441047|gb|EDP18771.1| hypothetical protein CLOBOL_01133 [Clostridium bolteae ATCC BAA-613] Length = 453 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 45/284 (15%) Query: 25 FFDDWHLIHRALPEISFDE---VDPSVEFLGKK------LSFPLLISSMTGGNNKMIERI 75 +DD + L + DE V +GK L P+ IS M+ G + Sbjct: 89 GWDDILFLGAQLNPMPLDEHAPVKTET-IIGKHAAKPMVLDHPVYISHMSFGALSRETK- 146 Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLG---AVQLNYD 131 L+ + + AM G ++ + A + ++V NL A+++ Sbjct: 147 -TALSRGSAMARTAMCSGEGGILPEEKAAAYKYIFEYVPNQYSVTDENLREADAIEIKIG 205 Query: 132 FGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLSSK--IALLSSAMDV- 184 G + H + + + PL Q++I P+ F + +K + L + + Sbjct: 206 QGTKPGMGGHLPGGKVTPEIAAIRNKPLGQDVISPSR---FPGIDTKEDLKALVDRLRLV 262 Query: 185 ----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 P+ +K + G D+E + +G + I GRGG + + + RD S Sbjct: 263 SGGRPIGIK-IAAGRIEKDLEFCVYAGPDFITIDGRGGATGASPKIIRDSTS-------- 313 Query: 241 WGIPTPLSLEMARPYCNEA----QFIASGGLRNGVDILKSIILG 280 +PT +L AR Y ++A Q + +GGLR D K++ +G Sbjct: 314 --VPTIYALYRARKYLDQAGCGAQLVITGGLRVSSDFAKALAMG 355 >gi|39996341|ref|NP_952292.1| glutamate synthase-related protein [Geobacter sulfurreducens PCA] gi|39983221|gb|AAR34615.1| glutamate synthase-related protein [Geobacter sulfurreducens PCA] gi|298505350|gb|ADI84073.1| glutamate synthase, FMN-Fe(II)-binding domain protein [Geobacter sulfurreducens KN400] Length = 509 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 102/337 (30%), Gaps = 73/337 (21%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDHNA 104 ++ +P + S+M+ G + R +A+AA + G A Sbjct: 172 RMEYPFIFSAMSYGALNLNAH--RAMAMAASELGTLYNTGEGGLHKDLYRYGANVMVQVA 229 Query: 105 IKSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 F + + + + + Q + +K + + + + Sbjct: 230 SGRFGVSEQYLNAGVAIEIKVGQGAKPGIGGHLPGEKVNDQISETRM------IPVGSDA 283 Query: 160 IQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I P + + DL I L A + P+ +K + ++G I Sbjct: 284 ISPAPHHDIYSIEDLRQLIFALKEATNYEKPVSVKIAAVHHVAAIASGVARAGADIITID 343 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLR 268 G G + + + RD + G+P L+L N+ + GG+R Sbjct: 344 GFRGGTGAAPQVIRD----------NVGLPMELALASVDARLRDEGIRNQVAIVVGGGVR 393 Query: 269 NGVDILKSIILGASLGGLASPFLKPA------------------------------MDSS 298 + D +K+I LGA L + L + Sbjct: 394 SSGDAIKAIALGADAINLGTSTLLALGCTLCQRCYTGKCPWGITTNNPYLAKRLNPELGA 453 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +V + + E + +G ++ L N +R Sbjct: 454 ERLVNLVHAWGHEMKEILGGMGLNALESLRGNRYKLR 490 >gi|51244360|ref|YP_064244.1| glutamate synthase, large subunit [Desulfotalea psychrophila LSv54] gi|50875397|emb|CAG35237.1| probable glutamate synthase, large subunit [Desulfotalea psychrophila LSv54] Length = 454 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 101/306 (33%), Gaps = 30/306 (9%) Query: 12 IVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKK------LSFPLLIS 62 + G R DD + LP EVD S LGK L P+L + Sbjct: 73 YYLEGKGTTRKFLGMDDLIFLPAQLETLPLGDEVEVD-STLVLGKVAGQPVLLQTPILNA 131 Query: 63 SMTGGN----NKMIERINRNLAIAAEKTKVAMAVGSQRVM---FSDHNAIKSFEL---RQ 112 +M+ G KM + +LA + + +R + + A F + R Sbjct: 132 AMSYGALSKEAKMALALGSSLAGTIANSGEGGMLDEERALADRITLQYATGRFGVSEERL 191 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 + I + + A + + Q + DLS Sbjct: 192 QLADMIEIKISQGAKPGMGGKLPGAKVTAEIAAVRQIA-PGKMAQSPAVHEDIRDVKDLS 250 Query: 173 SKIALLSSAMDV-PLLLKEVGCGLSSMDIELG-LKSGIRYFDIAGR-GGTSWSRIESHRD 229 +KI L S + P+ LK VG L + + ++ I G GGT + + Sbjct: 251 AKILELRSLIGGKPISLKFVGGHLQNDLAAIFSQENIPDVLVIDGSEGGTGAAPVTVKDH 310 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + + P + IA+GG+R+ DI K+I LGA + Sbjct: 311 VGMPLIYSL-----PRIAEFLDRNGLRDRVTLIAAGGIRHPGDIAKAIALGADGVYMGGA 365 Query: 290 FLKPAM 295 LK A+ Sbjct: 366 -LKIAI 370 >gi|76787370|ref|YP_329793.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus agalactiae A909] gi|77405494|ref|ZP_00782586.1| guanosine monophosphate reductase [Streptococcus agalactiae H36B] gi|123601774|sp|Q3K110|GUAC_STRA1 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|76562427|gb|ABA45011.1| guanosine monophosphate reductase [Streptococcus agalactiae A909] gi|77175891|gb|EAO78668.1| guanosine monophosphate reductase [Streptococcus agalactiae H36B] Length = 327 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 87/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV+ P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVI-------PANMQTIIDEEVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 +A + + A + F +++ ++ S +G YDF A + Sbjct: 59 -TLACEGYFYIMHRFNEEARRPF-IKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + E+IQ + + ++ G + + Sbjct: 117 TIDIAHGHSNSVIEMIQ---------------HIKQELPETFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V + ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGQQFKE 254 >gi|209778969|gb|ACI87795.1| putative glycolate oxidase [Cupressus sempervirens] Length = 106 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKE 311 + + GG+R G D+ +++ LGAS + P + A + + ++ LR E Sbjct: 4 KLHNGRLPVFLDGGVRRGTDVFEALALGASGIFIGRPVVYALAAEGEAGLSKVLQMLRDE 63 Query: 312 FIVSMFLLGTKRVQELYLN 330 F ++M L V+E+ N Sbjct: 64 FELTMALSRCCSVKEIIRN 82 >gi|7542413|gb|AAF63439.1| putative glutamate synthetase [Vibrio harveyi] Length = 242 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 19/128 (14%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 +F + ++ ++ +P+ K + DI+ L + Y + GRGG + + Sbjct: 36 DFKKFADRVREVTG--GIPIGFKLSANHVE-EDIQFALDASADYIILDGRGGGTGAAPAM 92 Query: 227 HRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILG 280 RD S +PT +L A+ + I +GGLR +D +K++ LG Sbjct: 93 FRDHIS----------VPTIPALARARRYLDAQGVSDRVTLIVTGGLRVPMDFVKAMALG 142 Query: 281 ASLGGLAS 288 A +++ Sbjct: 143 ADGVAISN 150 >gi|62319223|dbj|BAD94421.1| glycolate oxidase like protein [Arabidopsis thaliana] Length = 80 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 267 LRNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 +R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G + ++ Sbjct: 1 VRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLK 60 Query: 326 ELYLN 330 E+ N Sbjct: 61 EISRN 65 >gi|293401691|ref|ZP_06645833.1| glutamate synthase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304949|gb|EFE46196.1| glutamate synthase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 472 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 125/364 (34%), Gaps = 71/364 (19%) Query: 25 FFDDW-----HLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGGNNKMIE 73 FDD L H LP EV LGKK P +L+S M+ G Sbjct: 104 GFDDILLLGGQLAHPPLP--DKAEVST-TTILGKKAKKPMVLEHAVLVSHMSFGALSKEA 160 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ---LNY 130 + + AA +T G DH FE ++V NL A + Sbjct: 161 KTALAMGSAAVQTAQCSGEGGILPQERDHAYKYIFEYVP-NKYSVTDENLKAADAIEIKI 219 Query: 131 DFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFAD---LSSKIALLSSAMD 183 G + H + + + PL +II P+ L + + L S + Sbjct: 220 GQGSKPGMGGHLPKEKVTEEIATIRQKPLGHDIISPSRFEEITSKQALKALVDELRSRSE 279 Query: 184 V-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 P+ +K + G D+ + + I GRGG + + + +D + Sbjct: 280 GRPIGIK-IAAGRIEDDLSWIQYAAPDFITIDGRGGATGASPKYLKDNAT---------- 328 Query: 243 IPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILGASL--------------- 283 +PT +L AR Y + + I +GG R +++K++ +GA Sbjct: 329 VPTVYALARARAYMDAHDMPQELIMTGGFRTSGEMMKALAMGADAIAIASAAMMAIGCQQ 388 Query: 284 ----------GGLAS--PFLKP---AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G+A+ P L+ + + +++L++E + G + ++ Sbjct: 389 YRICHNGKCPMGIATQDPALRKRFDIEKGAKRLACYLDTLKEELKSFARVSGHDNIHDVT 448 Query: 329 LNTA 332 L Sbjct: 449 LADL 452 >gi|104781627|ref|YP_608125.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas entomophila L48] gi|95110614|emb|CAK15325.1| putative inosine-5'-monophosphate dehydrogenase [Pseudomonas entomophila L48] Length = 381 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 106/288 (36%), Gaps = 39/288 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 FDD L+ + S + D VE G +LS P+ IS+ T + +R A Sbjct: 8 FDDVLLVPKKTHLASRKDADIGVELKGLGRLSVPV-ISANT----QWCTE-DRMAMEMAR 61 Query: 85 KTKVAMA--VGSQRVMFSDHNAIKSFELRQYAPH-TVLISNLGAVQLNYDFGV--QKAHQ 139 + + + S + +A+KS + Q P + + G +++ G+ + Sbjct: 62 MGGLGIVHRMCSIEDQVAFVHAVKSAPVSQREPDFAPTLDSQGRLKVGGSIGIVDDYLQR 121 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSM 198 A + D FL L+ + + + IA + + D+P++ V + Sbjct: 122 AAGLAACDVDFLTLDIA--------HGHSTHAIAAIANVKERLGDIPIVAGNVA---TPE 170 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 + K+G + G+ + R + G+P ++ E Sbjct: 171 GVLDLAKAGASVIKVGIGPGSVCTT----RSVTGA--------GVPQLTAILECAAAARE 218 Query: 259 --AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 IA GG+R+ DI+K++ GA L L +S+ ++ Sbjct: 219 AGVSIIADGGIRSSGDIVKALAAGAHAVMLGR-MLAGTDESAAQLLEV 265 >gi|326389188|ref|ZP_08210764.1| glutamate synthase family protein [Novosphingobium nitrogenifigens DSM 19370] gi|326206331|gb|EGD57172.1| glutamate synthase family protein [Novosphingobium nitrogenifigens DSM 19370] Length = 347 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D+ L +KSG + G +G Sbjct: 107 RHPDWTGPDDLEIKIEELREITDWEKPIYVK-VGATRPYYDVALAVKSGADVVVLDGMQG 165 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIP ++ A + Q I SGG+RNG Sbjct: 166 GT-----------AATQDVFIEHVGIPILSAIRPAVQALQDLGMHRKVQLIVSGGIRNGA 214 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 215 DVAKALALGADAVAIGTAALVAL 237 >gi|258404370|ref|YP_003197112.1| Glutamate synthase (ferredoxin) [Desulfohalobium retbaense DSM 5692] gi|257796597|gb|ACV67534.1| Glutamate synthase (ferredoxin) [Desulfohalobium retbaense DSM 5692] Length = 1510 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 31/272 (11%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 ++ DEVD + G+ + P++I++M+ G+ E R A AA+K + Sbjct: 849 LAMDEVDIGI---GEH-AMPVVIAAMSFGSQ--GENSFRAYARAAQKANIVCLNGEGGEI 902 Query: 89 AMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 +G R A F + L +G + G ++ ++ Sbjct: 903 PDMLGRFRAHRGQQVASGRFGVSMELLNSSDFLEIKVGQGAKPGEGGHLPGNKVSDMV-- 960 Query: 147 DGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIEL 202 H P ++I P+ + + DL+ I L +A + +K Sbjct: 961 -AQARHCRPGIDLISPSNHHDIYSIEDLTQLITELKTAQPTARVSVKIPVTSGVGTIAVG 1019 Query: 203 GLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 K+G +++G GGT + R+ + + G+ + + + Sbjct: 1020 VAKAGADIINLSGFEGGTG-----AAREHAKKYVGLPVEIGVVEAHNALLEAGLREHVEL 1074 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKP 293 GGLR+G DIL+ ++LGA+ GL + L Sbjct: 1075 WCDGGLRSGKDILRMVLLGANRVGLGTAALMA 1106 Score = 36.8 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 14/135 (10%) Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +E I D GG S ++ R E V + T + + Sbjct: 606 LEGLTAEAIEAVD----GGASILVLDDQRCFERACAPVDPGLAVSTIGTALEGQGRRRRC 661 Query: 260 QFIA-SGGLRNGVDILKSIILGASLGG------LASPFLKPAMDSSDAVVAAIESLRKEF 312 + SG +RN D++ + LGA +A A+ + +AV + L+ Sbjct: 662 GLVVRSGAVRNLHDLMFLLGLGADAVAPYLLWQVALQTRGTAIPAHEAVQRTMHVLQVGM 721 Query: 313 IVSMFLLGTKRVQEL 327 M +G + EL Sbjct: 722 EKVMSTMG---IHEL 733 >gi|11498558|ref|NP_069786.1| glutamate synthase (gltB) [Archaeoglobus fulgidus DSM 4304] gi|2649642|gb|AAB90287.1| glutamate synthase (gltB) [Archaeoglobus fulgidus DSM 4304] Length = 511 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 120/356 (33%), Gaps = 80/356 (22%) Query: 40 SFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 F++++ + E ++ P++ S+M+ G ++LA+AA + G Sbjct: 159 DFEDIEITTELYPNVQIETPIVFSAMSYGAISYQAF--KSLAMAASEFGTLFNTG----- 211 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF-GVQKAHQAVHVLGAD-GLFLHLN-- 154 ELR+Y + ++ G ++ ++ V + GA G+ HL Sbjct: 212 ----EGGLPKELRKYGKNAIVQCASGRFGVDPEYLNVAAVVEIKIGQGAKPGIGGHLPGE 267 Query: 155 ----PLQEIIQ-PNGN-----------TNFADLSSKIALLSSAMDV--PLLLKEVGCGLS 196 P+ P G + DLS I L A + P+ +K Sbjct: 268 KVTLPISVTRMIPEGTDALSPAPQHDIYSIEDLSMLIYALKEATNYEKPVSVKIAAVHNV 327 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA---- 252 + +++G I G G + + + RD + GIP L+L Sbjct: 328 AAIASGMVRAGADIIAIDGLRGGTGAAPKMIRD----------NVGIPVELALAAVDQRL 377 Query: 253 --RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------------- 294 N+A + +GG R D++K+I LGA + +P L Sbjct: 378 RDEGIRNKASILVAGGFRCSADVVKAIALGADAVYIGTPALVAMGCTLCQKCHTGICNWG 437 Query: 295 --------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ +V + + E + +G ++ L N +R Sbjct: 438 ICTQDPYLAKRLNPEITAKRLVNLLRAWSHEIKEMLGGMGINAIESLRGNREQLRG 493 >gi|148988144|ref|ZP_01819607.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP6-BS73] gi|147926608|gb|EDK77681.1| isopentenyl-diphosphate delta-isomerase, type 2 [Streptococcus pneumoniae SP6-BS73] Length = 77 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 273 ILKSIILGASLGGLASPFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 ++K ++ GA GL+ L+ + + V+ ++ + + + M L + +L Sbjct: 1 MIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKADLRLIMCSLNCATIADLQKVD 60 Query: 332 ALIRHQ 337 L+ + Sbjct: 61 YLLYGK 66 >gi|332704183|ref|ZP_08424271.1| Glutamate synthase (NADPH) [Desulfovibrio africanus str. Walvis Bay] gi|332554332|gb|EGJ51376.1| Glutamate synthase (NADPH) [Desulfovibrio africanus str. Walvis Bay] Length = 507 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 103/343 (30%), Gaps = 81/343 (23%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFSDHNAIKS- 107 +L P++ ++M+ G IN NL A AA + G + S + K+ Sbjct: 169 LELEVPIMFAAMSFGA------INFNLHVAMARAATASGTMYNTGEGGLHRSLYKYGKNT 222 Query: 108 --------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLN 154 F + + + Q + +K V + Sbjct: 223 IVQVASGRFGVHSDYLNAGAAVEIKIGQGAKPGIGGHLPGEKIDARVSETRMVPI----- 277 Query: 155 PLQEIIQPNGNTNFADLSSK---IALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIR 209 + I P + + + I + A P+ +K + +++G Sbjct: 278 -GSDAISPAPHHDIYSIEDLHQLIYAIKEATAYTKPVSVKIAAVHNAPAIASGVVRAGAD 336 Query: 210 YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIA 263 + G G + + RD + G+P L+L N A +A Sbjct: 337 IVVVDGMRGGTGAAPAMIRD----------NVGLPMELALAAVDQRLRDEGIRNRASIVA 386 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------- 294 SGG+R D +K+I LGA + + L Sbjct: 387 SGGIRCSADAVKAIALGADAVYIGTATLISVGCTVCGRCYTGKCPWGIATNEASLAKRQN 446 Query: 295 -MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +++ + I++ E + +G ++ L N +R Sbjct: 447 PDVAAEKMANLIKAWGHEIQEMLGGMGLNSIESLRGNRDKLRG 489 >gi|326561355|gb|EGE11711.1| L-lactate dehydrogenase [Moraxella catarrhalis 46P47B1] Length = 121 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIE 306 ++ ++ + + G+R+G D+LK+I LGA + FL D V A+E Sbjct: 16 CVQASQAENSNCEVWLDSGIRSGQDVLKAIALGAKGTMIGRSFLYGLGAYGEDGVRRALE 75 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + KE V+M G + + + L++ Sbjct: 76 IIYKECDVTMAFCGHTNISTV-NSDILVKG 104 >gi|330900505|gb|EGH31924.1| glutamate synthase family protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 164 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 16/116 (13%) Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 D++L +K+G + G G + + E + GIP ++ A E Sbjct: 7 DVKLAVKAGADVIVLDGMQGGTAATQEVFIEH----------VGIPILPAIPQAVQALQE 56 Query: 259 ------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 Q I SGG+RNG D+ K++ LGA + + L D+ + ++ + Sbjct: 57 MGMHRKVQLIVSGGIRNGADVAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 112 >gi|329960819|ref|ZP_08299125.1| dihydroorotate dehydrogenase 2 [Bacteroides fluxus YIT 12057] gi|328532420|gb|EGF59221.1| dihydroorotate dehydrogenase 2 [Bacteroides fluxus YIT 12057] Length = 325 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 105/313 (33%), Gaps = 48/313 (15%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAM------ 90 F G KL P+++SS +G + + N+ LA A + ++ M Sbjct: 4 LETTFAGLKLKNPIIVSS-SGLTDSAAK--NQKLAAAGAGAIVLKSLFEEQIMMEADWMG 60 Query: 91 -------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 H + L + + I + ++ D + + Sbjct: 61 DPNMYPEGSDYLVGYIRQHKLGEYLNLIKESKQLCDIPVIASINCYQDADWIDFAKQIEE 120 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ +Q + ++ + + +P+++K + + I+ Sbjct: 121 AGADALEVNILALQTDVQYTYGSFEQRHIDILSHIKKTVKIPVIMKLGDNLTNPIALIDQ 180 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLSLEMARPY 255 +G + R IE + E+D+ + GI A Sbjct: 181 LYANGAAAVVLFNRFYQPDINIEKLTQISGNIFSNEADLAKALRWIGI--------ASAS 232 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 + + ASGG+ + ++K+I+ GAS + S + + ++S + Sbjct: 233 VGKLDYAASGGIHSPEGVVKAILAGASAVEICSVLYQNSYSVISEYTRFLDSWME--RQG 290 Query: 316 MFLLGTKRVQELY 328 M K + + Sbjct: 291 M-----KNINQFK 298 >gi|317127707|ref|YP_004093989.1| glutamate synthase (ferredoxin) [Bacillus cellulosilyticus DSM 2522] gi|315472655|gb|ADU29258.1| Glutamate synthase (ferredoxin) [Bacillus cellulosilyticus DSM 2522] Length = 1499 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 37/270 (13%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 +++ D+VD SV S P +ISSM+ G+ R A AA++ Sbjct: 829 DVNADDVDVSV----ANHSLPFMISSMSFGSQNETAF--RAYAEAADRLNMISFNGEGGE 882 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + +G A F + +L +G + G + + Sbjct: 883 IKDMLGKYPNTRGQQIASGRFGVNVELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTEKVA 942 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDI 200 A + ++I P+ N + + +A + + + + +K Sbjct: 943 A---ARNATTGSDLISPSNNHDIYSIED-LAQIITEIKTANDQAKVAVKVPIVPNIGTIA 998 Query: 201 ELGLKSGIRYFDIAGR-GGTSWSRIES--HRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 K+G + ++G GGT +R+ + H L ++IG+ + +L A + Sbjct: 999 VGVAKAGADFITLSGFDGGTGAARVHALQHVGLPAEIGVKAAHF------ALLEA-GLRH 1051 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + A GG+++ +D +K ++LGA+ G Sbjct: 1052 KVELWADGGVKSALDAVKLMLLGANRIGFG 1081 >gi|319901734|ref|YP_004161462.1| dihydroorotate oxidase [Bacteroides helcogenes P 36-108] gi|319416765|gb|ADV43876.1| dihydroorotate oxidase [Bacteroides helcogenes P 36-108] Length = 325 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 109/298 (36%), Gaps = 47/298 (15%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMA---VG 93 F G KL P+++SS +G + + N+ LA + + ++ M +G Sbjct: 4 LETSFAGLKLKNPIIVSS-SGLTDSAAK--NQKLAESGAGAIVLKSLFEEQIMMEADWLG 60 Query: 94 SQRVMFSDHNAIKSF-------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + + + + + + +I+++ Q N D+ V A Q Sbjct: 61 DPNMYPEGSDYLVGYIRQHKLGEYLNLIRDSKKSCNIPVIASINCYQ-NADW-VDFAKQ- 117 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 + GAD L +++ LQ ++ + ++ + +++P+++K + + Sbjct: 118 IEEAGADALEINILALQTDVEYTYGSFEQRHIDILSHIKKTVNIPVIMKLGDNLTNPVAL 177 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDL-------ESDIGIVFQDWGIPTPLSLEMA 252 I +G + R IE + E+D+ + GI A Sbjct: 178 INQLYANGAAAIVLFNRFYQPDINIEKMTQVSGNVFSSEADLSKALRWIGI--------A 229 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 + ASGG+ + ++K+I+ GAS + S + + + + S Sbjct: 230 SASVGNLDYAASGGIHSPEGVVKAILAGASAVEICSVLYQNSYSTIAEFTRFLNSWMD 287 >gi|163851085|ref|YP_001639128.1| ferredoxin-dependent glutamate synthase [Methylobacterium extorquens PA1] gi|163662690|gb|ABY30057.1| ferredoxin-dependent glutamate synthase [Methylobacterium extorquens PA1] Length = 447 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 206 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQG 264 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q + SGG+R+G Sbjct: 265 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRSGA 313 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 314 DVAKVLALGADAVAIGTAALIAL 336 >gi|163761529|ref|ZP_02168601.1| putative glutamate synthase [NADPH] large chain precursor [Hoeflea phototrophica DFL-43] gi|162281243|gb|EDQ31542.1| putative glutamate synthase [NADPH] large chain precursor [Hoeflea phototrophica DFL-43] Length = 442 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D L +KSG + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITNWEKPIYVK-IGGSRPYYDTALAVKSGADVIVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G+PT + A E Q + SGG+R+G Sbjct: 260 GT-----------AATQDVFIEHVGMPTLACIRPAVQALQELGMHRKVQLVISGGIRSGA 308 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + + D+ A ++L Sbjct: 309 DVAKALALGADAVSIGTAAMVALGDNDPKWEAEYQAL 345 >gi|188580827|ref|YP_001924272.1| ferredoxin-dependent glutamate synthase [Methylobacterium populi BJ001] gi|179344325|gb|ACB79737.1| ferredoxin-dependent glutamate synthase [Methylobacterium populi BJ001] Length = 448 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 207 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQG 265 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q + SGG+R+G Sbjct: 266 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRSGA 314 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 315 DVAKVLALGADAVAIGTAALIAL 337 >gi|218529915|ref|YP_002420731.1| ferredoxin-dependent glutamate synthase [Methylobacterium chloromethanicum CM4] gi|218522218|gb|ACK82803.1| ferredoxin-dependent glutamate synthase [Methylobacterium chloromethanicum CM4] Length = 447 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 206 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQG 264 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q + SGG+R+G Sbjct: 265 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRSGA 313 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 314 DVAKVLALGADAVAIGTAALIAL 336 >gi|330951134|gb|EGH51394.1| L-lactate dehydrogenase [Pseudomonas syringae Cit 7] Length = 95 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 2/85 (2%) Query: 245 TPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVV 302 T +L + + ++ +A G+R+G+D+++ + LGA L D V Sbjct: 1 TAKALPPIVQAVGSDLTVLADSGIRSGLDVVRMLALGAKGILLGRSMAYALGADGQRGVE 60 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 ++ +E V+M L G ++++ Sbjct: 61 NMLDIFAREMHVAMTLTGVTSIEQI 85 >gi|289168268|ref|YP_003446537.1| lactate oxidase [Streptococcus mitis B6] gi|288907835|emb|CBJ22675.1| lactate oxidase [Streptococcus mitis B6] Length = 308 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 84/292 (28%), Gaps = 59/292 (20%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N + F+ ++ L + +EF G+KLS P++++ + Sbjct: 40 AEDTFTLRENIRAFNHKLIVPHTL--CDVENPSTEIEFAGEKLSSPIIMAPVA------A 91 Query: 73 ERINRNLAIAAEKTKV----AMAVGSQRVMFSDHNAIK-------SFELRQYAPHTV--- 118 ++ A V ++ S + F+ + Sbjct: 92 HKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEITEALQGTPHWFQFYFSKDDGINRH 151 Query: 119 LISNLGA-----VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 ++ + A + L D V ++ V + + ++E + P G D Sbjct: 152 IMDRVKAEGYKAIVLTADATV-GGNREVDKRNGFVFPVGMPIVEEYL-PEGAGKSMDFVY 209 Query: 174 KIAL----------LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 K A ++ +P+ +K C D+E L +G + GG Sbjct: 210 KSAKQRLSPRDVEFIAEYSGLPVYVKGPQC---REDVERSLAAGASGIWVTNHGGRQIDG 266 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 + D ++ + G+R G LK Sbjct: 267 GPAAFDSLQEVAE-----------------AVDKRVPIVFDSGVRRGHTSLK 301 >gi|15922526|ref|NP_378195.1| glutamate synthase large subunit [Sulfolobus tokodaii str. 7] gi|15623316|dbj|BAB67304.1| 635aa long hypothetical glutamate synthase large subunit [Sulfolobus tokodaii str. 7] Length = 635 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 95/328 (28%), Gaps = 63/328 (19%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG----------SQRVMFSDHNA 104 +S PL + M+ G + N +A AA+ T G S+R+ +A Sbjct: 1 MSAPLYLGDMSYGA--LSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASA 58 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 + ++ +G G+ V L + + I P Sbjct: 59 RFGVDFDVLMHGAGIVIKIGQGAKP---GIGGHLPGSKVTEPISLTRRIPVGIDAISPAP 115 Query: 165 NTNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + +I L A P+ +K + + G I G G + Sbjct: 116 HHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTG 175 Query: 222 SRIESHRDLESDIGIVFQDWGIP------TPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 + RD + GIP + + + + IA+G + + D K Sbjct: 176 ATPIVIRD----------NVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAK 225 Query: 276 SIILGASLGGLASPFL-----------------KPAMDSSDA------------VVAAIE 306 I LGA + + + L + D +V I Sbjct: 226 LIALGADVVSVGTGALIAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIH 285 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALI 334 E + LG + EL L+ Sbjct: 286 GFSLELANILDNLGLSSIDELKGRRDLL 313 >gi|23015414|ref|ZP_00055191.1| COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 22/114 (19%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L +L+K + +++ D + L G ++ GG + D Sbjct: 233 WDDLKSLRDQWQGRMLVKGI---MTASDAKTALGLGADGIWVSNHGGRQLDSAPAAID-- 287 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA-SGGLRNGVDILKSIILGASLG 284 SL R + GG+R+G D++++ GA Sbjct: 288 ----------------SLSAIRAALGPDPVVVMDGGIRSGEDVVRAGATGADFV 325 >gi|330448118|ref|ZP_08311766.1| FMN-dependent dehydrogenase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492309|dbj|GAA06263.1| FMN-dependent dehydrogenase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 389 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 21/156 (13%) Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 K+ L L+LK + + D + + G+ I+ GG S Sbjct: 241 DKVTRLRDKWKGNLVLKGLS---TVEDSQKAISLGLDGIIISNHGGRQLDAGPSTISK-- 295 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 S+E+ + + G+R+G DI +++ G L F+ Sbjct: 296 ---------------SIEIMEKCKGQITIMMDSGIRDGADIARTLSTGIEFAFLGRSFMY 340 Query: 293 PAMD-SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 I L+K+ M + V L Sbjct: 341 GVGALGDHGGHHTINMLKKQLQQVMEQCCCESVYSL 376 Score = 40.2 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 7/86 (8%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + RN LI L + + + G+ + P IS + + + Sbjct: 35 CNIEMALKRNTHDIRQIELIPYYLRDYN--SISLKTTLFGETYNAPFGISPV---GLQGL 89 Query: 73 ERIN--RNLAIAAEKTKVAMAVGSQR 96 N LA AA + + + + Sbjct: 90 IWPNAPEILAKAAFEQNIPFVLSTVS 115 >gi|295087675|emb|CBK69198.1| Dihydroorotate dehydrogenase [Bacteroides xylanisolvens XB1A] Length = 325 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 101/289 (34%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSVGK--NKKLAEDGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLSEYLTLIKESKKVCPIPIIASINCYTDSEWIDFAKKIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + +++P+++K + + I+ Sbjct: 120 EAGADALEINILALQSELQYTYGSFEQRHIDILRRIKQTVNIPVIMKLGDNLTNPVVLID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE + +I D P + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIEKMEHMSGEIFSNASDLANP-LRWIGIASAVVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANAESVVKAILAGASAVEVCSAVYLNTNAFIGEANRFLSAWME 287 >gi|254560779|ref|YP_003067874.1| FMN-dependent dehydrogenase with glutamate synthase region [Methylobacterium extorquens DM4] gi|254268057|emb|CAX23928.1| FMN-dependent dehydrogenase with conserved glutamate synthase region [Methylobacterium extorquens DM4] Length = 447 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 206 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQG 264 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q + SGG+R+G Sbjct: 265 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRSGA 313 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 314 DVAKVLALGADAVAIGTAALIAL 336 >gi|237712816|ref|ZP_04543297.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. D1] gi|262408827|ref|ZP_06085372.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294648179|ref|ZP_06725719.1| dihydroorotate oxidase [Bacteroides ovatus SD CC 2a] gi|294810757|ref|ZP_06769405.1| dihydroorotate oxidase [Bacteroides xylanisolvens SD CC 1b] gi|298484091|ref|ZP_07002259.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. D22] gi|229447144|gb|EEO52935.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. D1] gi|262353038|gb|EEZ02133.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292636454|gb|EFF54932.1| dihydroorotate oxidase [Bacteroides ovatus SD CC 2a] gi|294442090|gb|EFG10909.1| dihydroorotate oxidase [Bacteroides xylanisolvens SD CC 1b] gi|298269772|gb|EFI11365.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. D22] Length = 325 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 101/289 (34%), Gaps = 41/289 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D F G L P++ISS +G N + + N+ LA V ++ +++M Sbjct: 3 DLKTTFAGLSLRNPIIISS-SGLTNSVGK--NKKLAEDGAGAIVLKSLFEEQIMLEADQL 59 Query: 105 IKSF----------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 L + + I + ++ D + + Sbjct: 60 KDPAFYPEASDYLEEYIREHKLSEYLTLIKESKKVCPIPIIASINCYTDSEWIDFAKKIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ +Q + + + +++P+++K + + I+ Sbjct: 120 EAGADALEINILALQSELQYTYGSFEQRHIDILRRIKQTVNIPVIMKLGDNLTNPVVLID 179 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + R IE + +I D P + +A ++ + Sbjct: 180 QLYANGAAAVVLFNRFYQPDINIEKMEHISGEIFSNASDLANP-LRWIGIASAVVDKIDY 238 Query: 262 IASGGLRNGVDILKSIILGASLG--------------GLASPFLKPAMD 296 ASGG+ N ++K+I+ GAS G A+ FL M+ Sbjct: 239 AASGGVANAESVVKAILAGASAVEVCSAVYLNTNAFIGEANRFLSAWME 287 >gi|159044417|ref|YP_001533211.1| putative glutamate synthase large subunit-like protein [Dinoroseobacter shibae DFL 12] gi|157912177|gb|ABV93610.1| putative glutamate synthase large subunit-like protein [Dinoroseobacter shibae DFL 12] Length = 444 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + VP+ +K VG D L +K+G + G +G Sbjct: 201 RHPDWTGPDDLEIKILELREITGWRVPIYVK-VGGARPYFDTTLAVKAGADVVVLDGMQG 259 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + G P + A + Q + SGG+R G Sbjct: 260 GT-----------AATQDVFIEHVGQPLLACIPEAVRALQDLGVHREVQLVVSGGIRTGA 308 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K++ LGA + + L Sbjct: 309 DVAKALALGADATAIGTAALIAL 331 >gi|326803980|ref|YP_004321798.1| GMP reductase [Aerococcus urinae ACS-120-V-Col10a] gi|326650881|gb|AEA01064.1| GMP reductase [Aerococcus urinae ACS-120-V-Col10a] Length = 322 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 87/286 (30%), Gaps = 40/286 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++ LI S E D ++F K P++ M +N +LA Sbjct: 6 YEQVQLIPAKCIVQSRSECDTGIQFGPHKFKIPVV-------PANMQTVLNESLAE---- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 K+A + + F +R+ L +++ ++ + + ++ + Sbjct: 55 -KLAANGYFYIMHRFEPEKRLDF-IRRMNQKG-LYASVSVGVKPEEYDFIDEVKESGEKV 111 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + I + + ++ G + + Sbjct: 112 DYITIDI------------AHGHSHTVIDMIKYIKKQLPNAFVI--AGNIATPEAVRDLE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + + IA Sbjct: 158 NAGADATKVGVGPGRVCIT-------KIKTGFGTAGWQL---AAIRLCAKAARK-PIIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KS GAS+ + S + V+ + ++ Sbjct: 207 GGIRTHGDIAKSFRFGASMVMIGSLLAAHEESPGEEVIQNGQKYKE 252 >gi|226312671|ref|YP_002772565.1| hypothetical protein BBR47_30840 [Brevibacillus brevis NBRC 100599] gi|226095619|dbj|BAH44061.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 470 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 104/318 (32%), Gaps = 63/318 (19%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGK-----KLSFPLLISSMTGGNNKMIERINR 77 FD L P EVD + L P++ +M G + E + Sbjct: 96 FDSLIFSPAQLAMMPACEDIEVDMQITIGPMAKKPLTLDIPIMAGAM-GYGIGVSEDV-- 152 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ-- 135 A A AVGS + R++A H +L N G + Q Sbjct: 153 ---KIAIAKGTA-AVGSLTNTGEGPLLPEE---RKFAKHLILQYNSGKWAKEPEILRQAD 205 Query: 136 --KAHQAVHVLGADGLFLHLNPLQ------------EII-----QPNGNT--NFADLSSK 174 + H A F+ +Q E+I P + L K Sbjct: 206 AIEIHFGQGATAASASFIPAEYIQGRAAEIMGVQDEEMIVIPSRHPEVQKPEDLKQLVDK 265 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESD 233 + ++ VP+ +K + D+E+ +++G+ + I G+ GT Sbjct: 266 LRTITD--GVPIGVKICASAILEKDLEIVIQAGVDFISIDGGQAGTKGGPP--------- 314 Query: 234 IGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 I+ D+G+PT +L + ++ GG + LK+I LGA + Sbjct: 315 --ILEDDFGLPTIYALTRAVRYLEKKGVKERITLLSGGGYNTPGECLKAIALGADGIFMG 372 Query: 288 SPFLKPAMDSSDAVVAAI 305 + L D V AI Sbjct: 373 TALLWAMTH--DQVTKAI 388 >gi|116753532|ref|YP_842650.1| glutamate synthase (NADPH) [Methanosaeta thermophila PT] gi|116664983|gb|ABK14010.1| glutamate synthase (NADPH) GltB2 subunit [Methanosaeta thermophila PT] Length = 497 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 107/340 (31%), Gaps = 74/340 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------QRVMFSDHNAIK 106 L P+L S+M+ G + LAIAA ++ G R F +H ++ Sbjct: 158 LTLETPMLFSAMSYGAISYNAF--QALAIAASRSGTFFNTGEGGMPAEMRSQFKEHTIVQ 215 Query: 107 S----FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 F + ++ + Q + +K Q V + Sbjct: 216 VASGRFGIDAEYLNSGAAVEIKIGQGAKPGIGGHLPGEKVSQHVAATRM------IPEGT 269 Query: 158 EIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + I P + + + L+ + + P+++K S +++G Sbjct: 270 DAISPAPHHDIYSIEDLEMLISAIKEVTNYEKPVIVKVAAVHNISAIASGIVRAGADIIA 329 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGG 266 I G G + + ++ RD + GIP L++ IA GG Sbjct: 330 IDGMRGGTGAAPKAIRD----------NVGIPIELAVSSVDRRLRDEGIRERCSIIAGGG 379 Query: 267 LRNGVDILKSIILGASLGGLASPFLKP------------------------------AMD 296 +R D++K+I LGA + + L + Sbjct: 380 IRCSADVVKAIALGADAVYIGTAALIAMGCTLCQRCYTGRCSWGICTQDPGLMRRLNVEE 439 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 ++ +V + + E + +G ++ L N +R Sbjct: 440 AAQRLVNLLSAWSHEIKEMLGGMGINAIESLRGNRDQLRG 479 >gi|170751191|ref|YP_001757451.1| ferredoxin-dependent glutamate synthase [Methylobacterium radiotolerans JCM 2831] gi|170657713|gb|ACB26768.1| ferredoxin-dependent glutamate synthase [Methylobacterium radiotolerans JCM 2831] Length = 442 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 20/130 (15%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDL 230 ++ ++ + P+ +K VG D L KSG + G +GGT Sbjct: 215 LEELREITD-WEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQGGT----------- 261 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLG 284 + + + GIPT ++ A + Q + SGG+R+G D+ K + LGA Sbjct: 262 AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRSGADVAKVLALGADAV 321 Query: 285 GLASPFLKPA 294 + + L Sbjct: 322 AIGTAALIAL 331 >gi|295398205|ref|ZP_06808251.1| GMP reductase [Aerococcus viridans ATCC 11563] gi|294973555|gb|EFG49336.1| GMP reductase [Aerococcus viridans ATCC 11563] Length = 322 Score = 63.0 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 84/280 (30%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++ LI S + D S+EF G++ P++ M +N LA A Sbjct: 6 YEQVQLIPAKCVITSRSQADTSIEFGGREFKIPVV-------PANMQTVLNEALAEELAR 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVHV 143 K + + F ++ L +++ ++ + + + Sbjct: 59 KGYF------YIMHRFEPEKRMPF-IKHMNAEG-LFASISVGVKPEEYTFIDEIKASGER 110 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + + + + I + + ++ G + + Sbjct: 111 VDYITIDI------------AHGHSETVIDMIKYIKEQIPETFVI--AGNVATPEAVRDL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + ++++ + IA Sbjct: 157 ENAGADATKVGVGPGRVCIT-------KIKTGFGTAGWQL---QAIKLCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + S + V Sbjct: 206 DGGIRTNGDIAKSVRFGASMVMIGSLLAAHVESPGETVEE 245 >gi|301058641|ref|ZP_07199642.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447205|gb|EFK10969.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 498 Score = 63.0 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 98/355 (27%), Gaps = 77/355 (21%) Query: 42 DEVDPSVEFLGKK--------LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM--- 90 D++D V L ++ + P M+ G+ IN L+ T + Sbjct: 151 DDMDLGV-LLNRRGDNAHLARIEVPFYGGGMSYGSV----SINTMLSRMKAATLLGTFCC 205 Query: 91 -AVGSQRVMFSDHN-------AIKSFELRQYAPHTVLISNLGAVQ---------LNYDFG 133 G ++ A F +R+ V I Q L D Sbjct: 206 TGEGGYPDELKPYDDHVITQVATGLFGVREETLQRVKIVEFKYAQGAKPGLGGHLLGDKV 265 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + + LF P + + D I + +K Sbjct: 266 TPGVARMREAVVGYPLFSPF-PFHSVYSVEDHKKHVDWIKAINP-----KALVSVKVSTP 319 Query: 194 GLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 M +G + G GGT + + +++ I P Sbjct: 320 TDVDMVAVGSYYAGAHIIHLDGSYGGTGAAPDIAKKNIAMPIEYAL-----PKVHRFLTE 374 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLG----------------------GLASPF 290 ++ IASGG+R D+ K+I LGA G A Sbjct: 375 EGVRDKITVIASGGIRTPHDVAKTIALGADGVCTGTADLVALECIRCHNCESGRGCARGI 434 Query: 291 ---------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY-LNTALIR 335 L + ++ + RKE + + LG K ++EL L+ Sbjct: 435 ASTDSELMNLIEVEWGTQRILNLFLAWRKELVRILRKLGMKNLKELVGRTDCLVH 489 >gi|301056983|gb|ADK54808.1| hydroxyphenylglycine aminotransferase [uncultured soil bacterium] Length = 750 Score = 63.0 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 88/312 (28%), Gaps = 60/312 (19%) Query: 12 IVCKDPGIDRNKKFFDDWHLI-----HRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG 66 + ++ N++ FD L H PE +V+ LG + PL + + G Sbjct: 25 LAAEERAWAGNREAFDRVGLRQGRSGHPGPPE-------TAVKILGHTWTAPLAVGPLAG 77 Query: 67 GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 E + AA + + V + +F L + Sbjct: 78 LARPEGEP---AVVRAAGAAGLPVTVSAF--------TKHTFAELSSVAGGPLWLRIHPS 126 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 + + A GA P I + S + L S +PL Sbjct: 127 RDRAEVRDLAGRAADAGFGALLYGETGPP----IGSRAPLDARADWSDVEWLRSVTSLPL 182 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L V + D L++G ++ D Sbjct: 183 LAAGVR---TIADAVRALEAGADGIV-------------------AEALDTLPD------ 214 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS-DAVVAAI 305 +A + GG+R G D+L S+ GA L P L + V + Sbjct: 215 ----IASAVAGRCPVLLGGGIRRGADVLASLASGADAVFLERPVLDGLLVGGRKGVEDVL 270 Query: 306 ESLRKEFIVSMF 317 + L +E ++ Sbjct: 271 DQLAQELREALA 282 >gi|225174244|ref|ZP_03728243.1| ferredoxin-dependent glutamate synthase [Dethiobacter alkaliphilus AHT 1] gi|225170029|gb|EEG78824.1| ferredoxin-dependent glutamate synthase [Dethiobacter alkaliphilus AHT 1] Length = 464 Score = 63.0 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 96/289 (33%), Gaps = 58/289 (20%) Query: 45 DPSVEFLGKK------LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 D SV GKK +S P++I+ M G ++K K+A+A GS Sbjct: 114 DSSVTI-GKKSEKPFTISMPIMIAPMAYG------------VALSKKAKIALAKGSAMAG 160 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV------LGADGLFLH 152 + F + LI G+ + A+ + + G H Sbjct: 161 TGTNTGEGPFLPEERQAAKYLIYQFHRGDWGKTPGIMRQCDAIEIQLGQGSISGVGHIFH 220 Query: 153 LNPL-QEIIQPNGNTNFADLSSK-----------IALLSSAM-----DVPLLLKEVGCGL 195 + +E+ G D + + L + +P+ +K Sbjct: 221 SKDMDKELRTAFGFPKGRDAVAHSMQPGVSSPKDLKDLVDRLRDVGGGIPIGVKMAAGKF 280 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------ 249 D+E+ +G+ + + G ++ I+ D+G+P ++ Sbjct: 281 LEKDLEIICNAGVDFIALEGA----------EAATKASPPILQDDFGVPMIFAIYRAARW 330 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 Y N+ IASG +R DILK+ LGA + + L + Sbjct: 331 LEKNNYKNQVSLIASGKMRTPGDILKACALGADACYIGTIALFAMSHTQ 379 >gi|285803507|pdb|3KHJ|A Chain A, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803508|pdb|3KHJ|B Chain B, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803509|pdb|3KHJ|C Chain C, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803510|pdb|3KHJ|D Chain D, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803511|pdb|3KHJ|E Chain E, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803512|pdb|3KHJ|F Chain F, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803513|pdb|3KHJ|G Chain G, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 gi|285803514|pdb|3KHJ|H Chain H, C. Parvum Inosine Monophosphate Dehydrogenase Bound By Inhibitor C64 Length = 361 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 99/278 (35%), Gaps = 51/278 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIA-- 82 F+D L+ E+ EV + L PL+ S+M + + +L Sbjct: 15 FEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAM--------DTVTEHLMAVGM 65 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 A + + K+ ++ + + N G +++ GV + +A Sbjct: 66 ARLGGIGII-------------HKNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKL 112 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ A + L+ + + ++ + + S M++ ++ VG ++ + Sbjct: 113 LVEAGVDVIVLDSA--------HGHSLNIIRTLKEIKSKMNIDVI---VGNVVTEEATKE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQ 260 +++G + G+ + + G+P ++E ++ Sbjct: 162 LIENGADGIKVGIGPGSICTT------------RIVAGVGVPQITAIEKCSSVASKFGIP 209 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 IA GG+R DI K++ +GAS + L +S Sbjct: 210 IIADGGIRYSGDIGKALAVGASSV-MIGSILAGTEESP 246 >gi|164426242|ref|XP_001728310.1| hypothetical protein NCU11278 [Neurospora crassa OR74A] gi|157071257|gb|EDO65219.1| predicted protein [Neurospora crassa OR74A] Length = 369 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 80/303 (26%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 N + L R L V S L +S P+ ++ + G + + + Sbjct: 56 SNSHTYSLITLRPRILH--DVSRVSISTRILDHLVSSPIFAAATSLGTTVHPDG-EKAIG 112 Query: 81 IAAEKTKVAM--------AVGSQRVMFSDHNAI-------------------KSFEL--- 110 A +K V M +VG D + F+L Sbjct: 113 RACKKLGVGMTISTSASFSVGEIARAVEDCETVTERKEKEEKEEKEEKAIPPLWFQLYVD 172 Query: 111 --RQYAPHTV---LISNLGAVQLNYDFGV---QKAHQAVHVLGADGLFLHLNPLQ----E 158 R + + + + + AV L D V ++A + + A GL P+ E Sbjct: 173 KDRSKSEKLLKQAVDAGVKAVFLTVDAPVPGKREADERISAEEAVGLSSSGVPMTGEKAE 232 Query: 159 IIQPNGNT--------NFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGI 208 Q G + + IA L + V ++LK V ++ D +++G+ Sbjct: 233 NDQSGGGLGRITGKFLDASVSWGDIAWLRRCLPEEVKIVLKGVQ---TAADAVRAMEAGV 289 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA----QFIAS 264 ++ GG S + T L L + C + + + Sbjct: 290 EGIVVSNHGGRSLDTAPA------------------TILVLLELQRCCPQVFDKMEVLVD 331 Query: 265 GGL 267 GG+ Sbjct: 332 GGV 334 >gi|254479428|ref|ZP_05092758.1| inosine-5'-monophosphate dehydrogenase [Carboxydibrachium pacificum DSM 12653] gi|214034633|gb|EEB75377.1| inosine-5'-monophosphate dehydrogenase [Carboxydibrachium pacificum DSM 12653] Length = 497 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 74/467 (15%), Positives = 132/467 (28%), Gaps = 154/467 (32%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMI 72 +D + FDD LI A ++ +VD K L+ PL M+ G + + Sbjct: 14 MEDKFVKEGLT-FDDVLLIP-AKSDVLPKDVDLKTRLTKKITLNIPL----MSAGMDTVT 67 Query: 73 ERINRNLAIA-AEKTKV------------AMAVG----SQRVMFSDH-NAIKSFELRQYA 114 E LAIA A + + AM V S+ + +D + +R A Sbjct: 68 E---ARLAIAIAREGGIGVIHKNMSIERQAMEVDKVKRSEHGVITDPFSLSPDHTIRDAA 124 Query: 115 P--------------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 + L+ + + ++ + K + V L+E Sbjct: 125 ELMARYKISGVPITVDSKLVGIITNRDIRFEDDLDKPIREVMTKENLVTAPPGTTLEEAK 184 Query: 161 QPNGNTNFADL-----------SSKIALLSSAMDVPLLLKE----------VGCGLSSMD 199 Q L I + A++ P K+ VG G MD Sbjct: 185 QILKKHKIEKLPLVDENNVLKGLITIKDIEKAVEFPNAAKDEKGRLLVAAAVGVGKDMMD 244 Query: 200 -IELGLKSGIRYFDIAGRGGT-----------------------SWSRIESHRDLESDIG 235 ++ +++G+ + G + + E+ RDL Sbjct: 245 RVKALIEAGVDAIVVDTAHGHSTRVLDAVAKIKEKYPDVQLIAGNVATAEATRDLIERGA 304 Query: 236 IVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSII 278 G+P ++ ++ IA GG++ DI+K+I Sbjct: 305 DAVKVGIGPGSICTTRVVAGVGVPQITAIYECAKEADKYGIPVIADGGIKYSGDIVKAIA 364 Query: 279 LGASLGGLASPF-------------------------------------------LKPAM 295 GAS+ + S F +K Sbjct: 365 AGASVVMIGSLFAGTEESPGEIEIYQGRSYKVYRGMGSLGAMKEGSSDRYFQEEAVKLVP 424 Query: 296 DSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + + L M G K ++EL T +R Sbjct: 425 EGVEGRVPYRGPLRETVYQLIGGLRAGMGYCGVKNIEELRTKTKFVR 471 >gi|317473693|ref|ZP_07932980.1| rubredoxin [Anaerostipes sp. 3_2_56FAA] gi|316898814|gb|EFV20841.1| rubredoxin [Anaerostipes sp. 3_2_56FAA] Length = 464 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 38/262 (14%) Query: 42 DEVDPSVEFLGKKLS------FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ 95 D VD GKK P+ +S M+ G + + + LA + +K AM G Sbjct: 120 DPVDTKTVI-GKKAKKPMEIYHPIYVSHMSFGA--LSKELKTALAKGSAMSKTAMCSGEG 176 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLIS--NLG---AVQLNYDFGVQ---KAHQAVHVLGAD 147 ++ + A + + +Y P+ ++ NL A+++ G + H + + Sbjct: 177 GILPEERQAAYKY-IFEYVPNLYSVTEENLRSADAIEIKIGQGTKPGMGGHLPGDKVTPE 235 Query: 148 GLFLHLNPLQE-IIQPNGNTNF---ADLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIEL 202 + PL E +I P+ N DL + + L P+ +K + G D+E Sbjct: 236 IAKIRNKPLGEDVISPSKFPNLNSKEDLKTMVDWLKDTSGGRPVGVK-IAAGHIEQDLEW 294 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----E 258 + + I GRGG + + + +D S IPT +L AR Y + Sbjct: 295 IAYADADFVTIDGRGGATGASPRTLKDNTS----------IPTIFALSRARKYLDRHHLS 344 Query: 259 AQFIASGGLRNGVDILKSIILG 280 + +GGLR D K++ +G Sbjct: 345 MDLVITGGLRLPGDFAKALAMG 366 >gi|121535367|ref|ZP_01667179.1| Glutamate synthase (NADPH) [Thermosinus carboxydivorans Nor1] gi|121306059|gb|EAX46989.1| Glutamate synthase (NADPH) [Thermosinus carboxydivorans Nor1] Length = 498 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 46/194 (23%) Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 ++ P+ +K + +++G I G G + + RD Sbjct: 297 ATHYRKPVAVKVSAVHNIAAIASGIVRAGADIISIDGFRGGTGAAPTMIRD--------- 347 Query: 239 QDWGIPTPLSLEMA------RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + GIP ++L + N A I +GG+RN D++K+I LGA + + L Sbjct: 348 -NVGIPIEIALAVVDERLRREGIRNRASIIVAGGIRNSADVVKAIALGADAVAIGTAALV 406 Query: 293 PA------------------------------MDSSDAVVAAIESLRKEFIVSMFLLGTK 322 + + + + E + LG Sbjct: 407 ALGCHVCQRCHTGKCAWGIATQRDDLVSRLDPEIGAKMLTNLLRAWSLEIKEMLGALGVN 466 Query: 323 RVQELYLNTALIRH 336 ++ L + +R Sbjct: 467 ALESLRGSRERLRG 480 >gi|313674966|ref|YP_004052962.1| glutamate synthase (nadph) [Marivirga tractuosa DSM 4126] gi|312941664|gb|ADR20854.1| Glutamate synthase (NADPH) [Marivirga tractuosa DSM 4126] Length = 572 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 142 HVLGADGLFLHLNPL-QEIIQPNGNTNFA---DLSSKIALLSSAMDVPLLLKEV-GCGLS 196 + A+ + P+ ++ P + F+ L I + + P+ +K V G + Sbjct: 300 EKITAEIAQIRKIPMGKDAYAPARHREFSDVAGLFDFIDKVRKITNKPVGIKMVIGHTVE 359 Query: 197 SMDIELGLK----SGIRYFDI-AGRGGTSWS--RIESHRDLESDIGIVFQDWGIPTPLSL 249 DI +K G Y I G GGT S + S+ L + DW Sbjct: 360 IEDIAKKMKDEPGRGPDYIVIDGGDGGTGASPHVLSSYAGLPMKQALAVADWA------- 412 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ ASG + +DI ++ LGA +A F+ Sbjct: 413 LRHNGVRDKVVLFASGKIATTIDIAVAMALGADAVYIARGFM 454 >gi|313898612|ref|ZP_07832147.1| rubredoxin [Clostridium sp. HGF2] gi|312956496|gb|EFR38129.1| rubredoxin [Clostridium sp. HGF2] Length = 466 Score = 62.6 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 125/371 (33%), Gaps = 75/371 (20%) Query: 20 DRNKKFFDDW-----HLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGGN 68 ++ +DD L H L +VD +GK P + +S M+ G Sbjct: 97 HKSVPGWDDILLLGGQLAHPPLA--DKADVDT-TTIIGKNARRPMVLNHAVYVSHMSFGA 153 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLG--- 124 + LA A G ++ + + + ++V NL Sbjct: 154 LSKEAK--TALAKGTAAVHTAQCSGEGGILPDEIDHAYKYIFEYVPNKYSVTDENLKRSD 211 Query: 125 AVQLNYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLSSKIALLSS 180 A+++ G + H + + + PL Q+II P+ + L + Sbjct: 212 AIEIKIGQGSKPGMGGHLPAEKVTEEISAIRGKPLHQDIISPSKFEEIK-TKDDLKQLVT 270 Query: 181 AM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 ++ P+ +K + G D+E + + I GRGG + + + +D + Sbjct: 271 SLRERSEGRPIGIK-IAAGHIEADLEWIAYAQPDFITIDGRGGATGASPKYLKDNST--- 326 Query: 236 IVFQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGASL-------- 283 +PT +L AR Y N+ + I +GG R +++K++ +GA Sbjct: 327 -------VPTVYALARARAYMNQHHMTQELIITGGFRTSGEMIKALAMGADAIAIASAAM 379 Query: 284 -----------------GGLAS--PFLK---PAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+A+ P L+ + + + LR+E + G Sbjct: 380 IAIGCQQYRICHNGKCPMGIATQDPELRKNFSIDKGAKRLENYLHVLREELKSFARISGH 439 Query: 322 KRVQELYLNTA 332 + +L Sbjct: 440 TCIHDLSREDL 450 >gi|167748005|ref|ZP_02420132.1| hypothetical protein ANACAC_02742 [Anaerostipes caccae DSM 14662] gi|167652582|gb|EDR96711.1| hypothetical protein ANACAC_02742 [Anaerostipes caccae DSM 14662] Length = 464 Score = 62.6 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 38/262 (14%) Query: 42 DEVDPSVEFLGKKLS------FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ 95 D VD GKK P+ +S M+ G + + + LA + +K AM G Sbjct: 120 DPVDTKTVI-GKKAKKPMEIYHPIYVSHMSFGA--LSKELKTALAKGSAMSKTAMCSGEG 176 Query: 96 RVMFSDHNAIKSFELRQYAPHTVLIS--NLG---AVQLNYDFGVQ---KAHQAVHVLGAD 147 ++ + A + + +Y P+ ++ NL A+++ G + H + + Sbjct: 177 GILPEERQAAYKY-IFEYVPNLYSVTEENLRSADAIEIKIGQGTKPGMGGHLPGDKVTPE 235 Query: 148 GLFLHLNPLQE-IIQPNGNTNF---ADLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIEL 202 + PL E +I P+ N DL + + L P+ +K + G D+E Sbjct: 236 IAKIRNKPLGEDVISPSKFPNLNSKEDLKTMVDWLKDTSGGRPVGVK-IAAGHIEQDLEW 294 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----E 258 + + I GRGG + + + +D S IPT +L AR Y + Sbjct: 295 IAYADADFVTIDGRGGATGASPRTLKDNTS----------IPTIFALSRARKYLDRHHLS 344 Query: 259 AQFIASGGLRNGVDILKSIILG 280 + +GGLR D K++ +G Sbjct: 345 MDLVITGGLRLPGDFAKALAMG 366 >gi|156322296|ref|XP_001618325.1| hypothetical protein NEMVEDRAFT_v1g8845 [Nematostella vectensis] gi|156198485|gb|EDO26225.1| predicted protein [Nematostella vectensis] Length = 77 Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP-FLKPAMDSSDAVVAAIESL 308 E+ + + GG+ G D+ K++ LGA L A + V +E L Sbjct: 6 EIVDAVQGKLEVYMDGGVTLGTDVFKALALGARAVFLGRAVIWGLACKGEEGVSYILELL 65 Query: 309 RKEFIVSMFLLG 320 R+E +M+L G Sbjct: 66 REELRKAMWLSG 77 >gi|212537429|ref|XP_002148870.1| oxidoreductase, putative [Penicillium marneffei ATCC 18224] gi|210068612|gb|EEA22703.1| oxidoreductase, putative [Penicillium marneffei ATCC 18224] Length = 121 Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESL 308 E+ + + G+R G DI+K+I LGA + P + ++ + ++ L Sbjct: 25 EIVEAVGKDMTVLFDSGIRTGADIVKAIALGAKAVFVGRPVMYGYGINGKEGAKEVLQGL 84 Query: 309 RKEFIVSMFLLGTKRVQELYL 329 +F +SM + G + + Sbjct: 85 LADFYLSMAIAGIPSIADCRR 105 >gi|20807078|ref|NP_622249.1| IMP dehydrogenase/GMP reductase [Thermoanaerobacter tengcongensis MB4] gi|20515568|gb|AAM23853.1| IMP dehydrogenase/GMP reductase [Thermoanaerobacter tengcongensis MB4] Length = 484 Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 74/467 (15%), Positives = 132/467 (28%), Gaps = 154/467 (32%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMI 72 +D + FDD LI A ++ +VD K L+ PL M+ G + + Sbjct: 1 MEDKFVKEGLT-FDDVLLIP-AKSDVLPKDVDLKTRLTKKITLNIPL----MSAGMDTVT 54 Query: 73 ERINRNLAIA-AEKTKV------------AMAVG----SQRVMFSDH-NAIKSFELRQYA 114 E LAIA A + + AM V S+ + +D + +R A Sbjct: 55 E---ARLAIAIAREGGIGVIHKNMSIERQAMEVDKVKRSEHGVITDPFSLSPDHTIRDAA 111 Query: 115 P--------------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 + L+ + + ++ + K + V L+E Sbjct: 112 ELMARYKISGVPITVDSKLVGIITNRDIRFEDDLDKPIREVMTKENLVTAPPGTTLEEAK 171 Query: 161 QPNGNTNFADL-----------SSKIALLSSAMDVPLLLKE----------VGCGLSSMD 199 Q L I + A++ P K+ VG G MD Sbjct: 172 QILKKHKIEKLPLVDENNVLKGLITIKDIEKAVEFPNAAKDEKGRLLVAAAVGVGKDMMD 231 Query: 200 -IELGLKSGIRYFDIAGRGGT-----------------------SWSRIESHRDLESDIG 235 ++ +++G+ + G + + E+ RDL Sbjct: 232 RVKALIEAGVDAIVVDTAHGHSTRVLDAVAKIKEKYPDVQLIAGNVATAEATRDLIERGA 291 Query: 236 IVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSII 278 G+P ++ ++ IA GG++ DI+K+I Sbjct: 292 DAVKVGIGPGSICTTRVVAGVGVPQITAIYECAKEADKYGIPVIADGGIKYSGDIVKAIA 351 Query: 279 LGASLGGLASPF-------------------------------------------LKPAM 295 GAS+ + S F +K Sbjct: 352 AGASVVMIGSLFAGTEESPGEIEIYQGRSYKVYRGMGSLGAMKEGSSDRYFQEEAVKLVP 411 Query: 296 DSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + + L M G K ++EL T +R Sbjct: 412 EGVEGRVPYRGPLRETVYQLIGGLRAGMGYCGVKNIEELRTKTKFVR 458 >gi|323697908|ref|ZP_08109820.1| Glutamate synthase (NADPH) [Desulfovibrio sp. ND132] gi|323457840|gb|EGB13705.1| Glutamate synthase (NADPH) [Desulfovibrio desulfuricans ND132] Length = 509 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 91/274 (33%), Gaps = 57/274 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 L P++ ++M+ G IN NL A AA + ++ Sbjct: 171 LTLDVPIMFAAMSFGA------INFNLHRAMARAATECG---------TYYNTGEGGLHK 215 Query: 109 ELRQYAPHTVLISNLGAVQLNYDF-------GVQKAHQAVHVLGADGLFLHLNP------ 155 L +Y HT++ G ++ D+ ++ A +G +N Sbjct: 216 TLYKYGEHTIVQVASGRFGVHRDYLRAGAAIEIKVGQGAKPGIGGHLPGGKVNDKVSETR 275 Query: 156 ----LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + I P + + + + L+ +S P+ +K + ++ Sbjct: 276 MIPIGSDAISPAPHHDIYSIEDLLQLIYALKEASEYKAPVSVKIAAVHNVAAIASGIARA 335 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQ 260 G I G G + + RD + GIP L+L N Sbjct: 336 GADIITIDGMRGGTGAAPAMIRD----------NVGIPIELALAQVDQRLRDEGIRNSVS 385 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 +A+GG+R D++K+I LGA + + L Sbjct: 386 VVAAGGIRCSGDVIKAIALGADAVYIGTATLIAV 419 >gi|255010409|ref|ZP_05282535.1| dihydroorotate dehydrogenase 2 [Bacteroides fragilis 3_1_12] gi|313148211|ref|ZP_07810404.1| dihydroorotate dehydrogenase [Bacteroides fragilis 3_1_12] gi|313136978|gb|EFR54338.1| dihydroorotate dehydrogenase [Bacteroides fragilis 3_1_12] Length = 324 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 94/274 (34%), Gaps = 49/274 (17%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS---- 100 D F G L P++ISS +G N + N L A V ++ +++M Sbjct: 3 DLKTTFAGLTLKNPVIISS-SGLTNSAAK--NAKLEAAGAGAIVLKSLFEEQIMLEADRL 59 Query: 101 ------------------DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 +H + EL + + I + ++ D + + Sbjct: 60 RNPSYYPEGSDYLAEYIRNHKLAEYLELIKESKKACTIPVIASINCYTDSEWIDFAKQIE 119 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IE 201 GAD L +++ LQ IQ + ++ + + +P+++K + + I+ Sbjct: 120 EAGADALEINILALQSDIQYKYGSFEQRHIDILSHIKKTIRIPVIMKLGSNFTNPVALID 179 Query: 202 LGLKSGIRY-----------FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 +G D+ TS + SD+ + GI + Sbjct: 180 QLYANGAAAVVLFNRFYQPDIDVEKMEHTSGDVFSNA----SDLSATLRWIGISS----- 230 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + + ASGG+ I+K+I+ GAS Sbjct: 231 ---SLVTKIDYAASGGIHKPDAIVKAILAGASAI 261 >gi|222056361|ref|YP_002538723.1| glutamate synthase (NADPH) [Geobacter sp. FRC-32] gi|221565650|gb|ACM21622.1| Glutamate synthase (NADPH) [Geobacter sp. FRC-32] Length = 509 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 104/336 (30%), Gaps = 69/336 (20%) Query: 53 KKLSFPLLISSMTGGNNKM-----IERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAI 105 KL +P + S+M+ G + + + L + + + A Sbjct: 171 LKLEYPFIFSAMSYGALNLNAHRAMAAAAQELGTIYNTGEGGLHKDLYKYGKNVIVQVAS 230 Query: 106 KSFELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 F + + + + + Q + +K + + + + I Sbjct: 231 GRFGVSEQYLNAGVGIEIKVGQGAKPGIGGHLPGEKVNDQISETRMIPM------GSDAI 284 Query: 161 QPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + + DL I L A + P+ +K + ++G I G Sbjct: 285 SPAPHHDIYSIEDLRQLIFALKEATNYEKPVSVKIAAVHHVAAIASGIARAGADIITIDG 344 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRN 269 G + + + RD + GIP L+L N+ + GG+RN Sbjct: 345 FRGGTGAAPQVIRD----------NVGIPMELALAAVDSRLRDEGIRNQVSIVVGGGVRN 394 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMD---SSD 299 D +K+I LGA L + P+L ++ ++ Sbjct: 395 SGDAIKAIALGADAINLGTSTLLAMGCTLCQRCYTGKCPWGITTNDPYLAKRLNPEVGAE 454 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +V + + E + +G ++ L N +R Sbjct: 455 KLVNLVHAWGHEMKEILGGMGLNALESLRGNRYKLR 490 >gi|78222965|ref|YP_384712.1| glutamate synthase (NADPH) GltB2 subunit [Geobacter metallireducens GS-15] gi|78194220|gb|ABB31987.1| glutamate synthase (NADPH) GltB2 subunit [Geobacter metallireducens GS-15] Length = 509 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 96/334 (28%), Gaps = 67/334 (20%) Query: 54 KLSFPLLISSMTGGNNKM-----IERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAIK 106 K+ +P + S+M+ G + + + L + + + A Sbjct: 172 KMEYPFIFSAMSYGALNLNAHKAMAMAAKELGTLYNTGEGGLHRDLYQYGSNVMVQVASG 231 Query: 107 SFELRQYAPHTVLISNLGAVQ---------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 F + + + + + Q L + + + ++ A + P Sbjct: 232 RFGVSEAYLNAGVAIEIKVGQGAKPGIGGHLPGEKVNDQISET-RMIPAGADAISPAPHH 290 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 +I + + P+ +K + ++G I G Sbjct: 291 DIYSIEDLRQLIFALKEATNYTK----PVSVKIAAVHHVAAIASGVARAGADIITIDGFR 346 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGV 271 G + + + RD + GIP L+L N+ + GG+R+ Sbjct: 347 GGTGAAPQVIRD----------NVGIPMELALAAVDARLRDEGIRNQVSIVVGGGVRSSG 396 Query: 272 DILKSIILGASLGGLASPFLKPA------------------------------MDSSDAV 301 D +K+I LGA + + L ++ + Sbjct: 397 DAIKAIALGADAINMGTSTLLALGCTLCQRCYTGKCPWGITTNNPYLAKRLNPELGAERL 456 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V + + E + +G ++ L N +R Sbjct: 457 VNLVHAWGHEMKEILGGMGLNALESLRGNRYKLR 490 >gi|325298084|ref|YP_004258001.1| dihydroorotate oxidase [Bacteroides salanitronis DSM 18170] gi|324317637|gb|ADY35528.1| dihydroorotate oxidase [Bacteroides salanitronis DSM 18170] Length = 325 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 106/312 (33%), Gaps = 47/312 (15%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQR 96 F G L P++ISS G ERI + L A + ++ M G+ Sbjct: 4 LKTTFAGLTLKNPIIISSS--GLTNSAERI-KKLEEAGAGAAVLKSVFEEQINMQAGTMH 60 Query: 97 ------------VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 H + L + A T I + ++ D + + Sbjct: 61 GYGAPEADDYLNAYVRSHALNEYISLIEEAKKTCTIPVIASINCYSDNEWVDFAKLMEKA 120 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L +++ LQ + + + + + +P+++K + + IE Sbjct: 121 GADALEINILALQTEKEYIPGSFEQRHIDILRHVKKEVRIPVIMKLGSNFTNPITLIEQL 180 Query: 204 LKSGIRYFDIAGRGGTSWSRIES-------HRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +G + R + IE+ ES++ + W T + A Sbjct: 181 YANGADAVVLFNRFYQTDIDIENLTFCNAHVLSEESELADRLR-W---TAI----ASASV 232 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + + SGG+ NG ++K+I+ GA + S + ++ I ++ E M Sbjct: 233 PKLDYAVSGGIHNGKGLVKAILAGACASEICSTV---YQNGAE----IIGTMLDELAQWM 285 Query: 317 FLLGTKRVQELY 328 G K ++ Sbjct: 286 DAKGFKSIESFR 297 >gi|123968700|ref|YP_001009558.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. AS9601] gi|123198810|gb|ABM70451.1| putative IMP dehydrogenase [Prochlorococcus marinus str. AS9601] Length = 387 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 59/204 (28%), Gaps = 58/204 (28%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 I L +M+ P++ G ++ +L + SG+ + G + + Sbjct: 178 NIKDLCQSMNAPVVA---GNCVTYEVAKLLMDSGVAGLMVGIGPGAACT----------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGG 285 GIP ++ N+ I GG+ G DI K + G+ Sbjct: 224 -SRGVLGIGIPQATAIADCSAARNDYFKETGRYVPIIGDGGIVTGGDICKCLACGSDAVM 282 Query: 286 LASPF-----------------------------------LKPAMDSSDAVVAAIESLRK 310 + SP L+ + + +L Sbjct: 283 IGSPVAKSSNAPGKGFHWGMATPSPVLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLG 342 Query: 311 EFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 343 AIRTSMSTLGAKNIKEMQKVEIVI 366 >gi|159038236|ref|YP_001537489.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Salinispora arenicola CNS-205] gi|157917071|gb|ABV98498.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Salinispora arenicola CNS-205] Length = 368 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 24/165 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L VPL++K V L D + +G ++ GG + Sbjct: 223 WDDLEWLRERTSVPLVVKGV---LDPRDAARAVAAGADAVVVSNHGGRQLDGAPATATAL 279 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + ++ + + G+R G+D+L+++ LGA + P L Sbjct: 280 P-----------------AVVDAVGDQCEVLLDSGVRGGMDVLRALALGAHGVLVGRPLL 322 Query: 292 K-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ---ELYLNTA 332 A A+ L EF ++ L G +L T Sbjct: 323 WALAAGGRAGAETALSLLTDEFRDALTLAGCADSAAARQLRTTTV 367 >gi|222444731|ref|ZP_03607246.1| hypothetical protein METSMIALI_00344 [Methanobrevibacter smithii DSM 2375] gi|222434296|gb|EEE41461.1| hypothetical protein METSMIALI_00344 [Methanobrevibacter smithii DSM 2375] Length = 545 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 104/281 (37%), Gaps = 41/281 (14%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERIN 76 +DD ++ L P EV + +GK + P+ +S M+ G +I Sbjct: 182 WDDILILGNQLNPMPLEEDAEVS-ATTVIGKNAEKPLVIENPVYVSHMSYGALSKESKI- 239 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGVQ 135 LA + K K AM G ++ NA + ++V NL + + Sbjct: 240 -ALAKGSFKAKTAMCSGEGGILPEVKNAAYKYIFEYVPNKYSVTDENLKTSD-AIEIKIG 297 Query: 136 KAHQAV-------HVLGADGLFLHLN-PLQEIIQPNGNTNF---ADLSSKIALLS-SAMD 183 +A + + + + ++II P+ N DL + L + Sbjct: 298 QATKPGMGGLLPGDKVTPEIAKVRGKKAGEDIISPSRFPNINSKKDLKDLVDELRLKSEG 357 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K + G D+E + + + GRGG + + RD S I Sbjct: 358 RPIGIK-IAAGYIENDLEFISYAKPDFITVDGRGGATGASPLLVRDSTS----------I 406 Query: 244 PTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILG 280 PT +L AR Y +E + +GGLR D K++ +G Sbjct: 407 PTIFALHRARKYLDEHDLNIDLVITGGLRVSSDFAKALAMG 447 >gi|116490604|ref|YP_810148.1| guanosine 5'-monophosphate oxidoreductase [Oenococcus oeni PSU-1] gi|118586945|ref|ZP_01544377.1| GMP reductase [Oenococcus oeni ATCC BAA-1163] gi|290890005|ref|ZP_06553090.1| hypothetical protein AWRIB429_0480 [Oenococcus oeni AWRIB429] gi|122277212|sp|Q04GD9|GUAC_OENOB RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|116091329|gb|ABJ56483.1| IMP dehydrogenase/GMP reductase [Oenococcus oeni PSU-1] gi|118432567|gb|EAV39301.1| GMP reductase [Oenococcus oeni ATCC BAA-1163] gi|290480352|gb|EFD88991.1| hypothetical protein AWRIB429_0480 [Oenococcus oeni AWRIB429] Length = 323 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 41/281 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +++ LI S E D SVEF G + P++ M I+ LAI + Sbjct: 6 YENVQLIPNKCLISSRSEADTSVEFGGHRFKLPVV-------PANMASVIDDKLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV-L 144 + K F LIS++ ++ + + V L Sbjct: 59 NG-------YFYIMHRFEPGKRFNFVTDMKQRGLISSISVGVKEEEY--RLIDELVDAGL 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + + + I + + ++ G + + Sbjct: 110 TPDYITIDI----------AHGYANTVIDMIHYIKKHLPKAFVV--AGNIATPDAVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + ++ + + IA Sbjct: 158 DAGADATKVGIGPGRACIT-------KLKTGFGTAGWQL---AAVRLCAKAARK-PIIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMD-SSDAVVAA 304 GG+R+ DI KS+ GAS+ + S F SD V+ Sbjct: 207 GGIRHNGDIAKSVRFGASMVMIGSLFAGHKQSPGSDLVIDH 247 >gi|218297195|ref|ZP_03497857.1| Glutamate synthase (ferredoxin) [Thermus aquaticus Y51MC23] gi|218242472|gb|EED09011.1| Glutamate synthase (ferredoxin) [Thermus aquaticus Y51MC23] Length = 1492 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 127/372 (34%), Gaps = 83/372 (22%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN---------KMIERINRN 78 + R+ E++ +EVD SV+ G S P +IS+M+ G+ + +R+N Sbjct: 815 EVRFPERS--EVAPEEVDLSVK--GH--SLPFVISAMSFGSQGEAAFRAYAEAAKRLNM- 867 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQK 136 L + E ++ +G A F + Y +V+ +G + G Sbjct: 868 LCMNGEGGEIPDMLGKYTHWRGQQVASGRFGVHAYMLNSGSVIEIKIGQGAKPGEGGHLP 927 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS----------AMDVPL 186 + + A + P ++I P+ N + + L+ ++ VP+ Sbjct: 928 GKKVSPKVAAARNAV---PGVDLISPSNNHDLYSIEDLAQLIEELKTVNPKALVSVKVPV 984 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + G+ ++ + + K+G ++G GGT + R + + G+ Sbjct: 985 I-----PGIGTIAVGIA-KAGADVITLSGFEGGTG-----AARLHALKYAGLPVELGVRR 1033 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA------------------ 287 + + + A GGL+ D+L+ ++LGA G+A Sbjct: 1034 AHRALVRAGLRDRVEIWADGGLKTAYDVLRMVLLGADRVGMATMAMVAIGCTICRGCQLD 1093 Query: 288 ----------------------SPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + + + + E+ + + LG + +Q Sbjct: 1094 TCHVGITTQIETVEEALAHGLKRFVPQDLERAVEQLTRFFEAKAEALRELVAALGARSLQ 1153 Query: 326 ELYLNTALIRHQ 337 EL L+ + Sbjct: 1154 ELRGRVDLLYQR 1165 Score = 37.2 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL----KPAMDSSDAVVAAIESLRKEFIVSM 316 + SGG+RN D+ + LGA P+L A++ V A+E+LRK + Sbjct: 648 LVHSGGVRNLHDVAFLLGLGAEAVA---PWLLEEKARALEGRKGVANALEALRKGLEKVI 704 Query: 317 FLLGTKRVQELY 328 +G + EL Sbjct: 705 STMG---IHELR 713 >gi|222153017|ref|YP_002562194.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus uberis 0140J] gi|254800138|sp|B9DS39|GUAC_STRU0 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|222113830|emb|CAR41922.1| GMP reductase [Streptococcus uberis 0140J] Length = 327 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVQLGKYSFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D + K F R + + + ++G + YDF A + Sbjct: 63 DG-----YFYIMHRFDEESRKPFIKRMHEQNLIASISVGVKEYEYDFVTSLKEDAPEFVT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHLESPGKLVEIDGETFKE 254 >gi|209559416|ref|YP_002285888.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes NZ131] gi|226739806|sp|B5XLI1|GUAC_STRPZ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|209540617|gb|ACI61193.1| GMP reductase [Streptococcus pyogenes NZ131] Length = 327 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G YDF A + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYDFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|56807607|ref|ZP_00365512.1| COG0516: IMP dehydrogenase/GMP reductase [Streptococcus pyogenes M49 591] Length = 334 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 17 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G YDF A + Sbjct: 70 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYDFVTSLKEDAPEFIT 124 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 125 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 167 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 168 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 216 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 217 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 261 >gi|224591463|ref|YP_002640778.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi WI91-23] gi|224553806|gb|ACN55207.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi WI91-23] Length = 404 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + +G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLGLIAGNIVTKEAALDLITAGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|221317057|ref|YP_002533423.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 72a] gi|225576246|ref|YP_002725244.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 94a] gi|221237443|gb|ACM10280.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 72a] gi|225546184|gb|ACN92198.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 94a] Length = 404 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLGLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|324501269|gb|ADY40567.1| Dihydropyrimidine dehydrogenase [NADP+] [Ascaris suum] Length = 1059 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 114/355 (32%), Gaps = 80/355 (22%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAV------- 92 DEVD SV G K P L S+ + M R A + + + Sbjct: 550 IDEVDISVNMCGLKFENPFGLASAPPTTSGAMCRR--------AFEQGWSFILTKTFSLD 601 Query: 93 -------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLI 120 G+ SF EL++ P ++I Sbjct: 602 KDLVTNVSPRIVRGTTSGHLYGPQQ-GSFLNIELISEKTAEYWLTCIGELKRDFPSKIII 660 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI----- 175 +++ A N D ++ A +A GAD L L+L+ + + G + Sbjct: 661 ASIMA-SFNQDDWIELASRA-EAAGADALELNLSCPHGMGE-RGMGLACGQDPNMVRSIC 717 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFD----IAG-----RGGTSWSRIE 225 + SA+++P K I K G ++G G++W + Sbjct: 718 QWVRSAVEIPFFAKMTPNVTDIRTIAKAAKDGNADGVTATNTVSGLMSLKEDGSAWPSVG 777 Query: 226 SHRDLES--DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 R G + + ++ A +A+GG+ + L+ + GAS+ Sbjct: 778 VERRTTYGGVSGSAIRPIALRAVSAIANA---LPGFPILATGGIESAETGLQFLHAGASV 834 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY-LNTALIRHQ 337 + A+ + D I+ ++L G K +++ + + +HQ Sbjct: 835 LQVC-----SAVQNQDYT--LIDDYCTGLRALLYLSGVKSLKDWNGQSPPVQKHQ 882 >gi|190572189|ref|YP_001970034.1| glutamate synthase subunit alpha [Stenotrophomonas maltophilia K279a] gi|190010111|emb|CAQ43719.1| putative glutamate synthase [nadph] large chain precursor [Stenotrophomonas maltophilia K279a] Length = 1484 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G I+G GGT S + S R V + G+ Sbjct: 1003 VSVKLVSHAGVGTIAAGVVKAGADLITISGHDGGTGASPVSSIR-----YAGVPWELGVA 1057 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1058 EAHQALLANDLRGRTLLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1117 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++E+ T L+R Sbjct: 1118 NNCATGVATQDERLRENHFTGQPERVENFFRLLAEEVRGWLAYLGARSLEEIVGRTDLLR 1177 Query: 336 H 336 Sbjct: 1178 Q 1178 >gi|148642087|ref|YP_001272600.1| glutamate synthase domain-containing protein [Methanobrevibacter smithii ATCC 35061] gi|148551104|gb|ABQ86232.1| glutamate synthase, domain 2 with rubredoxin [Methanobrevibacter smithii ATCC 35061] Length = 545 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERIN 76 +DD ++ L P EV + +GK + P+ +S M+ G +I Sbjct: 182 WDDILILGNQLNPMPLEEDAEVS-ATTVIGKNAEKPLVIENPVYVSHMSYGALSKESKI- 239 Query: 77 RNLAIAAEKTKVAMAVG-----------SQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 LA + K K AM G + + +F S + +G Sbjct: 240 -ALAKGSFKAKTAMCSGEGGILPEVKNEAYKYIFEYVPNKYSVTDENLKTSDAIEIKIGQ 298 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLS-SA 181 G+ + + ++II P+ N DL + L + Sbjct: 299 ATKPGMGGLLPGDKVTPEI---AKVRGKKAGEDIISPSRFPNINSKKDLKDLVDELRLKS 355 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K + G D+E + + + GRGG + + RD S Sbjct: 356 EGRPIGIK-IAAGYIENDLEFISYAKPDFITVDGRGGATGASPLLVRDSTS--------- 405 Query: 242 GIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILG 280 IPT +L AR Y + + + +GGLR D K++ +G Sbjct: 406 -IPTIFALHRARKYLDEHDLDIDLVITGGLRVSSDFAKALAMG 447 >gi|288555711|ref|YP_003427646.1| 2-nitropropane dioxygenase [Bacillus pseudofirmus OF4] gi|288546871|gb|ADC50754.1| 2-nitropropane dioxygenase [Bacillus pseudofirmus OF4] Length = 360 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 82/269 (30%), Gaps = 36/269 (13%) Query: 53 KKLSFPLLISSMTGGNNKMIERI-----NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS 107 + +P++ + M GG E I N L + A A+ +Q + Sbjct: 10 LNVRYPIIQAPMAGGIT-TTELICEAANNGCLGMIAAGYLTPEALAAQIDEVKEGTTQP- 67 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT- 166 F + + P Q D +Q+ L + + + Q++ Sbjct: 68 FGVNVFVPSAF-----RTSQKEIDHTLQQLEPIYQQLKVENREVIIPDYQQLFAVYNEHI 122 Query: 167 -----------NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +F ++ ++L + + + K+G+ + G Sbjct: 123 ETIIQKDVKICSFTFGLPASDIIQRLKKENIIL--IATATTVKEAIAAEKAGMDAVVVQG 180 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 S HR D G+ +SL IA+GG+ +G + Sbjct: 181 ------SEAGGHRGHFMDSVEE-SSIGL---MSLLPQVVDQVSIPVIAAGGIMDGRGLAA 230 Query: 276 SIILGASLGGLASPFLKPAMDSSDAVVAA 304 ++ LGA + + FL + A+ Sbjct: 231 ALCLGAEAVQMGTAFLTCVESGAPAIHKE 259 >gi|225576171|ref|YP_002725191.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 118a] gi|225546903|gb|ACN92897.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 118a] Length = 404 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLGLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|240277180|gb|EER40689.1| L-lactate dehydrogenase [Ajellomyces capsulatus H143] Length = 313 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + ++ ++LK + ++ D L + G ++ G + S ++ +I Sbjct: 91 ARTNLKIILKGI---MTVEDTLLAIGHGADAIIVSNNEGRQLDSVPSRMEVLPEI----- 142 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 I G+ G D+ K++ LGA + L Sbjct: 143 ------------VSAVRGRVPVIIESGITRGSDVFKALALGADFTLVGRSALWGLNFGGQ 190 Query: 300 A 300 Sbjct: 191 E 191 >gi|240138219|ref|YP_002962691.1| FMN-dependent dehydrogenase with conserved glutamate synthase region [Methylobacterium extorquens AM1] gi|240008188|gb|ACS39414.1| FMN-dependent dehydrogenase with conserved glutamate synthase region [Methylobacterium extorquens AM1] Length = 447 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 24/143 (16%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K VG D L KSG + G +G Sbjct: 206 RHPDWTGPDDLAIKIEELREITDWEKPIYVK-VGASRPYYDTALAAKSGADVVVLDGMQG 264 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT ++ A + Q + SGG+R G Sbjct: 265 GT-----------AATQDVFIEHVGIPTLAAIRPAVQALQDLGLHRKVQLVVSGGIRLGA 313 Query: 272 DILKSIILGASLGGLASPFLKPA 294 D+ K + LGA + + L Sbjct: 314 DVAKVLALGADAVAIGTAALIAL 336 >gi|121997847|ref|YP_001002634.1| glutamate synthase subunit alpha [Halorhodospira halophila SL1] gi|121589252|gb|ABM61832.1| glutamate synthase (NADPH) large subunit [Halorhodospira halophila SL1] Length = 1486 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 37/182 (20%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+ IAG GGT S + S + G+ Sbjct: 1000 QVSVKLVAEAGVGTVAAGVAKAYADLITIAGYDGGTGASPLTSV-----KYAGGPWELGL 1054 Query: 244 P-TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 T +L A ++ + A GG++ G+D++K ILGA G +P Sbjct: 1055 TETHQTLR-ANDLRDKVRLQADGGMKTGLDVVKGAILGAESFGFGTAPMVALGCKYLRIC 1113 Query: 291 -----------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LK + +++ V + +E + LLG +R+++L T L Sbjct: 1114 HLNNCATGVATQDNVLRLKHFVGTAEKVANYFRFVAEETREWLALLGVRRLEDLIGRTDL 1173 Query: 334 IR 335 + Sbjct: 1174 LE 1175 >gi|315425232|dbj|BAJ46901.1| glutamate synthase (NADPH/NADH) large chain [Candidatus Caldiarchaeum subterraneum] Length = 411 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 102/337 (30%), Gaps = 49/337 (14%) Query: 41 FDEVDPSVEFLG--KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM 98 VD SV G L+ P+ + M+ G + N LA AA+ T + G + Sbjct: 62 VAGVDASVSMAGGEITLTTPIYLGDMSFGA--LSGVPNIALARAADLTGILTGTGEGGLH 119 Query: 99 FSDHNAI----KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF---L 151 + R VL++ LG V + + L Sbjct: 120 PEVRKCRRITVQWASARFGVDIDVLMTGLGIVIKIGQGAKPGIGGHLPGVKVSRLISETR 179 Query: 152 HLNPLQEIIQPNGNTNFADLSS---KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + I P + + + +I L A P+ +K + G Sbjct: 180 RIPVGVDAISPAPHHDIYSIEDLGQRIMALKEATGKPVFVKVGVTNYIGYIACGVARMGA 239 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + G+G + + R+ ++G+ + +P + +A+G + Sbjct: 240 DGIILDGQGAGTGAAPAVVRN---NVGLPV-EIAVPVVDEMLRREGLREGFSVVAAGRVS 295 Query: 269 NGVDILKSIILGASLGGLASPFLKP-----------------AMDSSDA----------- 300 + D K I LGA L L + L + D Sbjct: 296 SAEDTAKLIALGADLVSLGTASLIAMGCIMVHKCHLGFCPAVLTNKIDDNPVKLLSLDTA 355 Query: 301 ---VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 VV + +E + + +G K V EL L+ Sbjct: 356 TKWVVNMVNGWTEELKLILDKVGVKSVGELCGRRDLL 392 >gi|51244357|ref|YP_064241.1| glutamate synthase, large subunit [Desulfotalea psychrophila LSv54] gi|50875394|emb|CAG35234.1| related to glutamate synthase, large subunit [Desulfotalea psychrophila LSv54] Length = 432 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 67/206 (32%), Gaps = 40/206 (19%) Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDV-PLLLKEVGCGLSSM-DIELGLKSGIRYFDIA 214 Q + DLS KI L +D P+ LK G L + + I Sbjct: 223 QSPAMRQDIKSAKDLSKKILELRRLLDGKPISLKLAGGHLQNDLEAIFSQDCIPDVLVID 282 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLR 268 G G L++ V + G+P SL IA+GG+R Sbjct: 283 GGEGC----------LDTVSVTVGEHVGLPLIYSLPRVGDFLDLTGLRERVTLIAAGGIR 332 Query: 269 NGVDILKSIILGASLGGLASPFLKPAM---------------------DSSDAVVAAIES 307 + DI K+I LGA ++ LK A+ D V I + Sbjct: 333 HSGDIAKAIALGADGVYMSGA-LKIALGPSSLSVAQGGQSLSEGLDIHDGGMRVANFISA 391 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTAL 333 +E L G + + +L + + Sbjct: 392 ATEEVKAIARLCGKRSIHDLNRDDLV 417 >gi|238608549|ref|XP_002397261.1| hypothetical protein MPER_02345 [Moniliophthora perniciosa FA553] gi|215471360|gb|EEB98191.1| hypothetical protein MPER_02345 [Moniliophthora perniciosa FA553] Length = 114 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 +++K++ LGA G FL + I+ L +E +M LLG ++Q+L Sbjct: 40 NVIKALCLGARAVGFGRAFLYAQSAYGEAGCDKIIQILDREMTTAMRLLGASKIQDLK 97 >gi|288905226|ref|YP_003430448.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus gallolyticus UCN34] gi|306831297|ref|ZP_07464457.1| GMP reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306833412|ref|ZP_07466539.1| GMP reductase [Streptococcus bovis ATCC 700338] gi|325978201|ref|YP_004287917.1| GMP reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731952|emb|CBI13517.1| Putative guanosine 5'-monophosphate oxidoreductase [Streptococcus gallolyticus UCN34] gi|304424182|gb|EFM27321.1| GMP reductase [Streptococcus bovis ATCC 700338] gi|304426533|gb|EFM29645.1| GMP reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178129|emb|CBZ48173.1| GMP reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 327 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 82/285 (28%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V P++ M I+ N+A Sbjct: 10 YEDIQLIPNKCIISSRSEADTQVTLGDYTFKLPVI-------PANMQTIIDENIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + D A K F R + + ++G YDF A + Sbjct: 59 -DLAKNGYFYIMHRFDEEARKPFVERMHEQGLIASISVGVKDYEYDFVTSLKDDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + + I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVINMIQHIKKELPKTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V E ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHLESPGKLVEVDGEQYKE 254 >gi|255262902|ref|ZP_05342244.1| (S)-mandelate dehydrogenase [Thalassiobium sp. R2A62] gi|255105237|gb|EET47911.1| (S)-mandelate dehydrogenase [Thalassiobium sp. R2A62] Length = 293 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 23/157 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L L++K V L D +G+ ++ G + Sbjct: 148 WDTLRRLRDMWPGNLVVKGV---LDPDDAVALRDAGVDAVQVSSHGARQLESAPAPIH-- 202 Query: 232 SDIGIVFQDWGIPTPLSLEMARP-YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +L R + GL G D++K+ GA+ L Sbjct: 203 ----------------ALSAVRAAVGPDYPLFFDSGLLGGEDVVKAYAQGANFAFLGRNL 246 Query: 291 LKPAM-DSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + LR E +++ +G + + Sbjct: 247 QFAITAGGEEGLSQLWSVLRDETSITLAQIGATSLAQ 283 >gi|312136061|ref|YP_004003399.1| glutamate synthase (NADPH) [Caldicellulosiruptor owensensis OL] gi|311776112|gb|ADQ05599.1| Glutamate synthase (NADPH) [Caldicellulosiruptor owensensis OL] Length = 502 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 104/336 (30%), Gaps = 69/336 (20%) Query: 53 KKLSFPLLISSMTGGN--NKMIERINRNLAIAAEKTKVAMAV-------GSQRVMFSDHN 103 +L P++ S+M+ G+ E + A +R + + Sbjct: 162 LELEVPVMFSAMSFGSISLNACESLAAAAAQVGTYWNTGEGGLHQKLYKYKERAIVQCAS 221 Query: 104 AIKSFELRQYAPHTVLISNLG---AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 ++ + +G + +K + V + + I Sbjct: 222 GRFGVDVDYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGEEVSRTRMIPI------GSDAI 275 Query: 161 QPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P + + DL I L A + P+ +K + ++G + I G Sbjct: 276 SPAPHHDIYSIEDLRQLIFALKEATNYTKPVGVKIAAVHNVAAIASGIARAGADFITIDG 335 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRN 269 G + + RD + GIP L+L N+ I +G +RN Sbjct: 336 VRGGTGAAPLRIRD----------NVGIPIELALAAVDSRLREEGIRNQVSIIVAGSIRN 385 Query: 270 GVDILKSIILGASLG-------------------------GLAS--PFLKPAMD---SSD 299 D++K+I LGA G+A+ P L ++ + Sbjct: 386 SADVVKAIALGADAVYIGTAALISLGCHVCQKCHTGKCNWGIATQDPVLVKRLNPEIGAK 445 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +++ E + L+G ++ L N ++R Sbjct: 446 RAANLLKAWSHEIKEMLGLMGINALESLRGNRLMLR 481 >gi|331700965|ref|YP_004397924.1| GMP reductase [Lactobacillus buchneri NRRL B-30929] gi|329128308|gb|AEB72861.1| GMP reductase [Lactobacillus buchneri NRRL B-30929] Length = 383 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 98/285 (34%), Gaps = 43/285 (15%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIER 74 D + FDD LI A ++ ++VD SV+ KL+ P L + M + Sbjct: 5 DEKFGKKGLTFDDVLLIPAA-SDVLPNDVDLSVQLADNLKLNVPFLSAGM--------DT 55 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDH--NAIKSFELRQYA--PHTVLISN---LGAVQ 127 + + A M V + + D K +++ A P + N L A Sbjct: 56 VTESKMAIALAKLGGMGVVHKNLSIEDQAAEIAKVKAVKKTADTPKAAVDDNDALLVAAA 115 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 + A+ GAD + + + + A + KIA + L Sbjct: 116 VGVSSDTFDRASALLKAGADAIVI----------DTAHGHSAGVLRKIAEIRDHYPHTTL 165 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G ++ E ++G+ + G+ + V G+P Sbjct: 166 I--AGNVATAAGTEALFQAGVDVVKVGIGPGSICTT------------RVVAGVGVPQIT 211 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 ++ A + IA GG++ DI+K++ G S L S F Sbjct: 212 AVYDAASVARKWGKAIIADGGIQYSGDIVKALAAGGSAVMLGSVF 256 >gi|148264539|ref|YP_001231245.1| glutamate synthase (NADPH) [Geobacter uraniireducens Rf4] gi|146398039|gb|ABQ26672.1| glutamate synthase (NADPH) GltB2 subunit [Geobacter uraniireducens Rf4] Length = 509 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 97/337 (28%), Gaps = 71/337 (21%) Query: 53 KKLSFPLLISSMTGGNNKM-----IERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAI 105 KL +P + S+M+ G + + + L + + + A Sbjct: 171 LKLEYPFIFSAMSYGALNLNAHRAMAAAAQELGTLYNTGEGGLHKDLYRYGKNVIVQVAS 230 Query: 106 KSFELRQYAPHTVLISNLGAVQ---------LNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 F + + + + + Q L + + + ++ + P Sbjct: 231 GRFGVSEQYLNAGVGIEIKVGQGAKPGIGGHLPGEKVNDQISET-RMIPVGADAISPAPH 289 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 +I I L A + P+ +K + ++G I Sbjct: 290 HDIYSIEDLR------QLIYALKEATNYEKPVSVKIAAVHHVAAIASGIARAGADIITID 343 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G G + + + RD + GIP L+L N+ + GG+R Sbjct: 344 GFRGGTGAAPQVIRD----------NVGIPMELALAAVDSRLRDEGIRNQVSIVVGGGVR 393 Query: 269 NGVDILKSIILGASLGGLASPFLKPA------------------------------MDSS 298 N D +K+I LGA L + L + Sbjct: 394 NSGDAIKAIALGADAINLGTSTLLALGCTLCQRCYTGKCPWGITTNNPYLAKRLNPEIGA 453 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + +V + + E + +G ++ L N +R Sbjct: 454 EKLVNLVHAWGHEMKEILGGMGLNALESLRGNRYKLR 490 >gi|15675112|ref|NP_269286.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes M1 GAS] gi|71910670|ref|YP_282220.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS5005] gi|45476970|sp|Q99ZQ1|GUAC_STRP1 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|13622271|gb|AAK34007.1| putative GMP reductase [Streptococcus pyogenes M1 GAS] gi|71853452|gb|AAZ51475.1| GMP reductase [Streptococcus pyogenes MGAS5005] Length = 327 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYEFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHFESPGKTVEVDGETFKE 254 >gi|114764126|ref|ZP_01443365.1| glutamate synthase family protein [Pelagibaca bermudensis HTCC2601] gi|114543484|gb|EAU46499.1| glutamate synthase family protein [Roseovarius sp. HTCC2601] Length = 498 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 72/226 (31%), Gaps = 22/226 (9%) Query: 83 AEKTKVAMAVGSQRVMFSDHNAI-KSFELRQ--YAPHTVLIS-NLGAVQLNYDFGVQKAH 138 A + +G+ + D +LR P + L G+ Sbjct: 183 AASCDLVFQIGTAKFGLRDEQGRIDDDKLRAVAANPQVKMFELKLAQGAKPGKGGILPGE 242 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEV-GCG 194 + + A L Q I PN + +F DL I + P+ K V G Sbjct: 243 KVNEEVAA---IRGLKVGQAGISPNRHPEIDDFDDLLDMIGHIREVSGKPVGFKTVIGSS 299 Query: 195 LSSMDIELGL-----KSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 + D+ + +S + I G GGT + + + I P + Sbjct: 300 DAWEDLFKLINERGSESAPDFICIDGGEGGTGAAPMPLIDLVGMPIREAL-----PRIVD 354 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 L + + IASG L N D+ +I LGA A F+ Sbjct: 355 LRDRYGLKDRIRIIASGKLVNPADVAWAICLGADFVTSARGFMFSL 400 >gi|254432174|ref|ZP_05045877.1| Conserved region in glutamate synthase family [Cyanobium sp. PCC 7001] gi|197626627|gb|EDY39186.1| Conserved region in glutamate synthase family [Cyanobium sp. PCC 7001] Length = 534 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 95/263 (36%), Gaps = 39/263 (14%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L PLL+S M+ G + R LA AE+ + G + M A L + Sbjct: 197 LRLEIPLLVSDMSFGALSEEAK--RALARGAEQAGTGICSG-EGGMLPAEQAANHRYLYE 253 Query: 113 YAPHTV-----LISNLGAVQLNYDF-----------GVQKAHQAVHVLGADGLFLHLNPL 156 AP L+S + A G + + V G +P Sbjct: 254 LAPAMFGYREELLSQVQAFHFKAGQAAKTGTGGHLPGAKVSESIARVRGIPEGEPSCSPA 313 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 Q + F ++ LS +P+ K + D++ L++G Y + GR Sbjct: 314 S-FEQLHTPAEFRRFGDRVRELSG--GIPVGFKLSAQHIEP-DLDFALEAGADYVILDGR 369 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNG 270 GG + + RD S +PT +L AR E I +GGLR Sbjct: 370 GGGTGGAPQLLRDHIS----------VPTIPALARARAHLDRRGASGEVTLIITGGLRTP 419 Query: 271 VDILKSIILGASLGGLASPFLKP 293 D +K++ LGA LA+ ++ Sbjct: 420 ADCVKALALGADGIALANAAIQA 442 >gi|21910329|ref|NP_664597.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS315] gi|28895904|ref|NP_802254.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes SSI-1] gi|45476943|sp|Q8K7I6|GUAC_STRP3 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|150383456|sp|Q1JGV8|GUAC_STRPD RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|21904525|gb|AAM79400.1| putative GMP reductase [Streptococcus pyogenes MGAS315] gi|28811154|dbj|BAC64087.1| putative GMP reductase [Streptococcus pyogenes SSI-1] Length = 327 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYEFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|94990480|ref|YP_598580.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS10270] gi|94543988|gb|ABF34036.1| GMP reductase [Streptococcus pyogenes MGAS10270] Length = 334 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 17 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 70 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYEFVTSLKEDAPEFIT 124 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 125 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 167 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 168 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 216 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 217 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 261 >gi|315925496|ref|ZP_07921706.1| glutamate synthase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621037|gb|EFV01008.1| glutamate synthase [Pseudoramibacter alactolyticus ATCC 23263] Length = 388 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 17/137 (12%) Query: 164 GNTNFADLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G + D+ I+ L D P+ +K + G D+ + L + + I GRGG+ Sbjct: 183 GLNDRGDVKKLISSLRDRADGRPIGIK-IAAGNIEKDVFVCLFAEPDFITIDGRGGSDGM 241 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSL-----EMARPYCNEAQFIASGGLRNGVDILKSI 277 R+ +G+PT ++ + I +GGLR DI+K++ Sbjct: 242 SPLLAREA----------FGVPTIYAIGRAVKRLKNYRNENVALIVTGGLRTSADIVKAL 291 Query: 278 ILGASLGGLASPFLKPA 294 +GA L S L A Sbjct: 292 AMGADAVALGSAPLIAA 308 >gi|218203980|ref|YP_002364844.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi ZS7] gi|226246772|ref|YP_002776105.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi Bol26] gi|218165346|gb|ACK75400.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi ZS7] gi|226202200|gb|ACO37870.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi Bol26] Length = 404 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|223987648|ref|YP_002601113.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 64b] gi|223929638|gb|ACN24348.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 64b] Length = 404 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|195942744|ref|ZP_03088126.1| inositol-5-monophosphate dehydrogenase [Borrelia burgdorferi 80a] gi|195942777|ref|ZP_03088159.1| inositol-5-monophosphate dehydrogenase [Borrelia burgdorferi 80a] Length = 404 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKSEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|194363842|ref|YP_002026452.1| glutamate synthase subunit alpha [Stenotrophomonas maltophilia R551-3] gi|194346646|gb|ACF49769.1| Glutamate synthase (ferredoxin) [Stenotrophomonas maltophilia R551-3] Length = 1484 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 60/181 (33%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G I+G GGT S + S R V + GI Sbjct: 1003 VSVKLVSHAGVGTIAAGVVKAGADLITISGHDGGTGASPVSSIR-----YAGVPWELGIA 1057 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1058 EAHQALLANDLRGRTLLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1117 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++E+ T L+R Sbjct: 1118 NNCATGVATQDERLRENHFTGQPERVENFFRLLAEEVRGWLSYLGVRSLEEIVGRTDLLR 1177 Query: 336 H 336 Sbjct: 1178 Q 1178 >gi|83288227|sp|Q48TL6|GUAC_STRPM RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase Length = 327 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAERLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYEFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|56752272|ref|YP_172973.1| inosine 5-monophosphate dehydrogenase [Synechococcus elongatus PCC 6301] gi|81300640|ref|YP_400848.1| inosine 5-monophosphate dehydrogenase [Synechococcus elongatus PCC 7942] gi|56687231|dbj|BAD80453.1| inosine-5'-monophosphate dehydrogenase [Synechococcus elongatus PCC 6301] gi|81169521|gb|ABB57861.1| IMP dehydrogenase related 2 [Synechococcus elongatus PCC 7942] Length = 387 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 60/203 (29%), Gaps = 58/203 (28%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A +M +P++L G ++ LK+G + G + + Sbjct: 179 LAAFCQSMPIPVIL---GNCVTYDVTLKLLKAGAAGILVGIGPGAACT------------ 223 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGL 286 GIP ++ ++ IA GGL G DI K I GA + Sbjct: 224 SRGVLGVGIPQATAVSDCAAARDDYERETGRYVPIIADGGLITGGDICKCIACGADAVMI 283 Query: 287 ASPFLKPA-----------------------------------MDSSDAVVAAIESLRKE 311 SPF + A + + + Sbjct: 284 GSPFARAAEAPGRGFHWGMATPSPVLPRGTRIKVGTTGTLEQILRGPAQLDDGTHNFLGA 343 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 SM LG + ++E+ + +I Sbjct: 344 LKTSMGTLGAQTLKEMQQVSVVI 366 >gi|167576736|ref|ZP_02369610.1| putative L-lactate dehydrogenase [Burkholderia thailandensis TXDOH] Length = 175 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 23/113 (20%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + L++K V L D + +G ++ GG Sbjct: 80 GWRD-VEWVQLLWGGKLIVKGV---LDPDDAIRAVDAGADALVVSNHGGRQLDGA----- 130 Query: 230 LESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + + +L + A+ GG+R G D+LK++ GA Sbjct: 131 -------------MSSVEALPAVVDAAGRRAEVWLDGGVRTGQDVLKAVARGA 170 >gi|156369958|ref|XP_001628240.1| predicted protein [Nematostella vectensis] gi|156215211|gb|EDO36177.1| predicted protein [Nematostella vectensis] Length = 1081 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 118/358 (32%), Gaps = 70/358 (19%) Query: 34 RALPEIS--FDEVDPSVEFLGKKLSFPLLI--------SSM------TGGNNKMIERINR 77 ALP D+VD SVE G K P + S+M G + + + Sbjct: 519 PALPRFFTPVDQVDLSVEICGIKFPNPFGLASAPPTTTSAMIRRGFEAGWGFALTKTFSL 578 Query: 78 NLAIAAEKTKVA--MAVGSQRVMFSDHNAIKSF-------------------ELRQYAPH 116 + I T V+ + G+ SF EL++ P Sbjct: 579 DKDIV---TNVSPRIVRGTTSGHLYGPGQ-GSFLNIELISEKTSAYWCRSITELKKDFPD 634 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNFADLSS 173 +LI+++ D+ + GAD L L+L+ E A+L Sbjct: 635 KILIASIMCGYSKQDWT--TLAKMAEAAGADALELNLSCPHGMGERGMGLACGQDAELVR 692 Query: 174 KIA-LLSSAMDVPLLLKEVGCGLSSMDIELGLKSG-IRYFD----IAG-RG--GTSWSRI 224 I + +A+ +P K + I K G ++G G GTS + Sbjct: 693 NICRWVRAAITIPFFAKLTPNVTDIVVIARAAKEGNADGVTATNTVSGLMGLKGTSEAWP 752 Query: 225 ESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 R+ + G + + P L ++ +A+GG+ + L+ + GAS Sbjct: 753 AIGREKRTTYGGMSGNAIRPIALRAVSAIGRALPGFPILATGGIDSADAALQFLHCGASA 812 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + A+ + D V ++ M++ K V E + RHQ Sbjct: 813 LQVC-----SAVQNQDFTV--VDDYINGLKCLMYM---KSVDEYADWEGQSPPTPRHQ 860 >gi|71903496|ref|YP_280299.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS6180] gi|71802591|gb|AAX71944.1| GMP reductase [Streptococcus pyogenes MGAS6180] Length = 334 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 17 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAERLAK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 70 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKACEYEFVTSLKEDAPEFIT 124 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 125 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 167 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 168 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 216 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 217 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 261 >gi|319892904|ref|YP_004149779.1| Ferredoxin-dependent glutamate synthase [Staphylococcus pseudintermedius HKU10-03] gi|317162600|gb|ADV06143.1| Ferredoxin-dependent glutamate synthase [Staphylococcus pseudintermedius HKU10-03] Length = 525 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 105/349 (30%), Gaps = 69/349 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKS- 107 G+ ++ P + + G + + +N AI A + MA + + SD++ Sbjct: 167 GEHVAHPFYVKRLVGQSGMSYGALGKN-AITALSKGLGMANTWMNTGEGGLSDYHLAGDV 225 Query: 108 ----------FELRQYA----PHTVLI----SNLGAVQLNYDFGVQKAHQAVH---VLGA 146 F +R P + + + A ++ G + + V Sbjct: 226 DIIFQIGPGLFGVRDEHGQFDPDHFMAVAQHTQVKAFEIKLAQGAKTRGGHIEGKKVTEE 285 Query: 147 DGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGC----GLSSMD 199 L P + + PN N DL I L P+ K V +D Sbjct: 286 IAKIRKLQPYETVDSPNRFDFINNAYDLLKWIDELREMSQKPVGFKMVLGRKDDFKQLID 345 Query: 200 IELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 L+ + I G GGT + E + + PT L A ++ Sbjct: 346 AMQTLQIYPDFITIDGGEGGTGATFQELQDGVGLPLFTAL-----PTIDGLLKAHQLRDK 400 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM---------------------DS 297 + ASG L I ++ LGA L +A + Sbjct: 401 VKIFASGKLVTPDKIAIALALGADLVNVARAMMISVGCIMSRQCHKNICPVGVATTDPKK 460 Query: 298 SDAVV---------AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+V I SL + +G K E+ I++Q Sbjct: 461 EEALVVDEKQYRVTNYITSLHEGLFNIAAAVGVKSPTEIGPEHVTIKYQ 509 >gi|332637361|ref|ZP_08416224.1| guanosine 5'-monophosphate oxidoreductase [Weissella cibaria KACC 11862] Length = 328 Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 90/276 (32%), Gaps = 42/276 (15%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + E S E D SV +K P++ M IN LA Sbjct: 9 YEDIQLIPNKCIIE-SRSEADTSVTLGNRKFKIPVV-------PANMQTVINEELA---- 56 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A + + F +R++ +++ ++ A QA ++ Sbjct: 57 -MKLATEGYFYVMHRFEPETRLDF-VRRFHEAGT-FASISVGIKQEEYEFIDALQAANLT 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 E I + +D + I + + + ++ G + + Sbjct: 114 P------------EYITIDIAHGHSDAVIKMIQYIKAHLPNAFVI--AGNVATPEAVRDL 159 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L + + IA Sbjct: 160 ENAGADATKLGVGPGKACIT-------KLKTGFGTGGWQL---AALRLCAKAAKK-PIIA 208 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 GG+R DI KSI GA++ + S F A + Sbjct: 209 DGGIRYNGDIAKSIRFGATMVMIGSLFAGHAETPGE 244 >gi|172038122|ref|YP_001804623.1| inosine 5-monophosphate dehydrogenase [Cyanothece sp. ATCC 51142] gi|171699576|gb|ACB52557.1| IMP dehydrogenase [Cyanothece sp. ATCC 51142] Length = 387 Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 72/395 (18%), Positives = 114/395 (28%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG-- 66 +I+ R D+ L+ R L D G + + P+L S+M G Sbjct: 2 DIIIGRGKTARRAYGIDEIALVPGTRTL---DPSLADTRWTIGGIERTIPILASAMDGVV 58 Query: 67 -----GNNKMIERIN-RNLAIAAEKT--------KVAMAVGSQRVMFSDHNAIKSFELRQ 112 G + I NL + ++A S+ V K + Sbjct: 59 DVKMAGLLSELGAIGVLNLEGIQTRYDDPEPILDRIASVGKSEFVGLMQELYAKPIQPEL 118 Query: 113 YAPHTVLISNLG--AVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQP 162 I N G A G + V GAD LF+ HL+P E I P Sbjct: 119 VKQRITDIKNNGGIAAVSLTPAGASQYGNIVAEAGADLLFVQATVVSTAHLSP--ESITP 176 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 F M +P++ G ++ +K+G + G + + Sbjct: 177 LDLQGF----------CQEMPMPVIF---GNCVTYEVALNLMKAGAAAVLVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 G+P P ++ N+ +A GG+ G DI Sbjct: 224 ------------SRGVLGVGVPQPTAIADCAAARNDYQQETGRYVPVVADGGIVTGGDIC 271 Query: 275 KSIILGASLGGLASPFLKPAMD------------------------SSDAVVAAI----- 305 K I GA + SP + A + +A I Sbjct: 272 KCIACGADAVMIGSPIARAAEAPGRGYHWGMATPSPVLPRGTRINVGTTGTIAEILTGPA 331 Query: 306 ------ESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG K ++E+ +I Sbjct: 332 KLDDGTHNLLGALKTSMGTLGAKDLKEMQEVEVVI 366 >gi|242279102|ref|YP_002991231.1| glutamate synthase (NADPH) [Desulfovibrio salexigens DSM 2638] gi|242121996|gb|ACS79692.1| Glutamate synthase (NADPH) [Desulfovibrio salexigens DSM 2638] Length = 508 Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 81/341 (23%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNL----AIAAEKTKVAMAVGSQRVMFSDHNAIKS-- 107 +L+ P+ + M+ G IN NL A+AA++ G + S + + Sbjct: 171 ELATPITFAGMSFGA------INYNLHAAMAMAAKELGTVYNTGEGGLHKSLYEYGQWTI 224 Query: 108 -------FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLGADGLFLHLNP 155 F + + + + Q + +K + + + P Sbjct: 225 VQVASGRFGVHSDYLNAGVGIEIKVGQGAKPGIGGHLPGEKINAMISETRM------IPP 278 Query: 156 LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 + I P + + + + L+ ++ VP+ +K + +++G Sbjct: 279 GSDAISPAPHHDIYSIEDLLQLIFALKEATEYRVPVAVKIAAVHNVAAIASGVVRAGADI 338 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIAS 264 + G G + + RD + GIP L+L ++A +A Sbjct: 339 LTLDGMKGGTGAAPAMTRD----------NVGIPIELALASVDQRLRDEGIRSKASIVAG 388 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA------------------------------ 294 GG R D++K+I LGA + + L Sbjct: 389 GGFRCSGDVIKAIALGADAVNIGTAALIAVGCTLCGRCYTGKCPWGIATNDKKLAKRQNP 448 Query: 295 MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 +++ +V + E + +G ++ L N +R Sbjct: 449 EVAAERLVNLVRGWSHEIEEMLGGMGLNSIESLRGNRDKLR 489 >gi|116309754|emb|CAH66797.1| H0215F08.8 [Oryza sativa Indica Group] Length = 276 Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 78/272 (28%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N + F R L + +D S+ LG +S P++I+ Sbjct: 30 AEDQWTLRENSEAFSRILFQPRVL--VDVSCIDMSMSVLGYNISMPIMIAPTALHKLAHP 87 Query: 64 ----------------MTGGNNKMI--ERIN--------------------RNLAIAAEK 85 MT + E +N + L AEK Sbjct: 88 EGELATARAAAAAETIMTLSSWSSCSIEEVNLAGPGVRFFQLSIYKDRNLVQQLIQRAEK 147 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V + + + + F L Q V L G+ + + Sbjct: 148 AGYKAIVLTVDAPWLGRREADVKNRFTLPQN------------VMLKIFEGLDQGK--ID 193 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + +F+ I L + +P+L+K + +++ D + Sbjct: 194 ETNGSGLA-------AYVASQIDRSFSW--KDIKWLQTVTSLPVLVKGI---ITAQDTRI 241 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ G ++ GG + + ++ Sbjct: 242 AIEYGAAGIIMSNHGGRQLDYLPATISCLEEL 273 >gi|225405477|ref|ZP_03760666.1| hypothetical protein CLOSTASPAR_04697 [Clostridium asparagiforme DSM 15981] gi|225042999|gb|EEG53245.1| hypothetical protein CLOSTASPAR_04697 [Clostridium asparagiforme DSM 15981] Length = 484 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 51/287 (17%) Query: 25 FFDDW-----HLIHRALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIE 73 +DD L L E V GK L P+ IS M+ G Sbjct: 120 GWDDILILGAQLNPPPLDE--HAPVSTRTVI-GKHAKQPMVLEHPVYISHMSFGALSKET 176 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS--NLG---AVQL 128 ++ L+ + + AM G ++ + +A + + +Y P+ ++ NL A+++ Sbjct: 177 KV--ALSQGSAMARTAMCSGEGGILPEEMDAAYKY-IFEYVPNLYSVTTENLRRADAIEI 233 Query: 129 NYDFGVQ---KAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTNFADLSSK--IALLSSAM 182 G + H + + + PL Q++I P + F + +K + L + Sbjct: 234 KIGQGTKPGMGGHLPGSKVTPEIAAIRNKPLGQDVISP---SKFPGIDTKEDLKALVDRL 290 Query: 183 -----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 P+ +K + G D+E + + + I GRGG + + + RD S Sbjct: 291 REESGGRPIGIK-IAAGRIERDLEFCVFAEPDFVTIDGRGGATGASPKLIRDATS----- 344 Query: 238 FQDWGIPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILG 280 +PT +L A+ Y N+ Q + +GGLR D K++ +G Sbjct: 345 -----VPTIYALHRAKAYLNKAGSPIQLVITGGLRVSSDFAKALAMG 386 >gi|254431568|ref|ZP_05045271.1| IMP dehydrogenase family protein [Cyanobium sp. PCC 7001] gi|197626021|gb|EDY38580.1| IMP dehydrogenase family protein [Cyanobium sp. PCC 7001] Length = 387 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 107/392 (27%), Gaps = 95/392 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---- 66 +I R D+ L+ + D S G P++ S+M G Sbjct: 2 DIQLGRSRTVRRAYGIDEIALVPGGRT-VDPAVTDSSWTLGGISREIPIIASAMDGVVDV 60 Query: 67 ------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 G + N L A K A V + ++S Sbjct: 61 GMAVELTRQGALGVLNLEGVQCRYDDPNPVLDRIAAVGKEAF-VPLMQELYSQPVRED-- 117 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAH--QAVHVLGADGLFLHLNPLQ-EIIQPNGN 165 A I G + V +A+ GAD F+ + E I P G Sbjct: 118 ---LIAKRIGQIKEKGGIAAVSATPVAAIRFGKAIAEAGADLFFVQATVVSTEHIGPEGQ 174 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + L VP+++ G ++ +++G + G + + Sbjct: 175 ASL-----DLEALCRDFGVPVVI---GNCVTYEVALKLMRAGAAGVMVGIGPGAACT--- 223 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSI 277 GIP ++ ++ IA GG+ G DI K + Sbjct: 224 ---------SRGVLGIGIPQATAVADCAAARDDHAAATGRYVPVIADGGIVTGGDICKCL 274 Query: 278 ILGASLGGLASPFLKPA-----------------------------------MDSSDAVV 302 GA + SP + A + + Sbjct: 275 ACGADAVMIGSPIARAAEAPGRGFHWGMATPSPVLPRGTRINVGTTGSLEKILRGPAGLD 334 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++L SM LG + ++E+ ++ Sbjct: 335 DGTQNLLGCIRTSMGTLGARTLKEMQQVEVVV 366 >gi|226246798|ref|YP_002776132.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 29805] gi|226201693|gb|ACO38285.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 29805] Length = 404 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|224593656|ref|YP_002640967.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi CA-11.2a] gi|224554940|gb|ACN56313.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi CA-11.2a] gi|312150022|gb|ADQ30082.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi N40] Length = 404 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|87124807|ref|ZP_01080655.1| putative IMP dehydrogenase [Synechococcus sp. RS9917] gi|86167686|gb|EAQ68945.1| putative IMP dehydrogenase [Synechococcus sp. RS9917] Length = 387 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 106/394 (26%), Gaps = 99/394 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 NI + R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 NIQLGRSKVVRRAYGIDEIALVPGGRTVDPEVT----DTRWSLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N L A K A V + ++S Sbjct: 58 VDVDMAVRLSKLGALGVLNLEGVQTRYEDPNSVLDRIAAVGKDAF-VPLMQEIYSQPVQE 116 Query: 106 KSFELRQYA--PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 K R A + + G FG A + + N I P Sbjct: 117 KLIRQRIEAIKAKGGIAAVSGTPVAALRFGKAIAEAGADLFFVQATVVSTNH----IGPE 172 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 G + L M VP+++ G ++ +++G + G + + Sbjct: 173 GQ----GTLD-LEALCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT- 223 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILK 275 GIP ++ + IA GG+ G DI K Sbjct: 224 -----------SRGVLGVGIPQATAVADCAAARADYEQESGRYVPIIADGGIVTGGDICK 272 Query: 276 SIILGASLGGLASPF-----------------------------------LKPAMDSSDA 300 I GA + SP L+ + Sbjct: 273 CIACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSLERILRGPAK 332 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + ++++ ++ Sbjct: 333 LDDGTHNLLGCLKTSMGTLGAQSLRDMQQVEVVV 366 >gi|72382529|ref|YP_291884.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. NATL2A] gi|72002379|gb|AAZ58181.1| IMP dehydrogenase related 2 [Prochlorococcus marinus str. NATL2A] Length = 387 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 68/241 (28%), Gaps = 64/241 (26%) Query: 138 HQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 V GAD FL + E + G+ N + L + +P+ VG ++ Sbjct: 146 KNLVKDSGADLFFLQATVVSTEHLGKEGSQNL-----DLYDLCKNIGIPV---AVGNCVT 197 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +K+G + G + + GIP ++ Sbjct: 198 YEVSLKLMKAGAAAVMVGIGPGAACT------------SRGVLGVGIPQATAISDCAAAR 245 Query: 257 NE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF------------------ 290 ++ IA GG+ G DI K I GA + SP Sbjct: 246 DDFQKESGKYVPIIADGGIITGGDICKCIACGADSVMIGSPIARSHEAPGKGFHWGMATP 305 Query: 291 -----------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LK + + +L SM LG ++E+ + Sbjct: 306 SPVLPRGTRIQVGTTGSLKSILCGPAILDDGTHNLLGAIKTSMGTLGATNIKEMQNVEVV 365 Query: 334 I 334 I Sbjct: 366 I 366 >gi|260428982|ref|ZP_05782959.1| glutamate synthase domain protein [Citreicella sp. SE45] gi|260419605|gb|EEX12858.1| glutamate synthase domain protein [Citreicella sp. SE45] Length = 497 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 15/157 (9%) Query: 148 GLFLHLNPLQEIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEV-GCGLSSMDIELG 203 L Q I PN + +F DL I + P+ K V G ++ Sbjct: 253 AAIRGLKVGQAGISPNRHREIDDFGDLLDMIGHIREVSGKPVGFKTVIGSSDEWENLFKL 312 Query: 204 L-----KSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +S + I G GGT + + + I P + L + Sbjct: 313 IIERGPESAPDFITIDGGEGGTGAAPMPLIDLVGMPIREAL-----PRIVDLRDRYGLKD 367 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + IASG L N D+ +I LGA A F+ Sbjct: 368 RIRIIASGKLVNPADVAWAICLGADFVTSARGFMFSL 404 >gi|104774368|ref|YP_619348.1| dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423449|emb|CAI98330.1| Dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 309 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 101/312 (32%), Gaps = 40/312 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V + A Sbjct: 63 DLLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAEILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMLEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGI---PTPLSLEMARPY 255 + G + T + +G F +G P + + Sbjct: 180 AQAAEGGGADGLTLIN---TLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVAQVKQ 236 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 I GG+ + D + I+ GAS + +M D + I+ + Sbjct: 237 ATSLPIIGVGGINSPEDAAEFILAGASAVQIG------SMSFYDKLA--IKHVIDGLPAV 288 Query: 316 MFLLGTKRVQEL 327 + +G V L Sbjct: 289 LAGMGASDVTSL 300 >gi|306829620|ref|ZP_07462810.1| GMP reductase [Streptococcus mitis ATCC 6249] gi|304428706|gb|EFM31796.1| GMP reductase [Streptococcus mitis ATCC 6249] Length = 328 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 K+A + D F R + + ++G YDF Q A + Sbjct: 59 -KLAEGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRKVADLKHVDYVI 316 >gi|288917739|ref|ZP_06412102.1| ferredoxin-dependent glutamate synthase [Frankia sp. EUN1f] gi|288350954|gb|EFC85168.1| ferredoxin-dependent glutamate synthase [Frankia sp. EUN1f] Length = 444 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 24/157 (15%) Query: 164 GNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RG 217 + ++ + + + P+ +K +G D++L + +G + G +G Sbjct: 204 RHPDWTGPDDLAIKILELREITDWEKPIYVK-IGASRPYYDVKLAVAAGADVVVLDGMQG 262 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGV 271 GT + + + GIPT +L A +E Q I SGG+R G Sbjct: 263 GT-----------AATQDVFIEHVGIPTLAALPQAVQALDELGLHRKVQLIVSGGIRTGA 311 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 D+ K++ LGA + + L D+ A E L Sbjct: 312 DVAKAMALGADAVAIGTAALIALGDNHPRYAAEYERL 348 >gi|218682710|ref|ZP_03530311.1| putative L-lactate dehydrogenase [Rhizobium etli CIAT 894] Length = 312 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 80/271 (29%), Gaps = 57/271 (21%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI 75 + + N F + R L ++S GK + P I+ M G + M R Sbjct: 47 NASLRHNAAAFQAYAFRPRVLRDVSGR--STETSLFGKTHAVPFGIAPM-GISALMAYRG 103 Query: 76 NRNLAIAAEKTKVAMAV-GSQRVMFS-----------------DHNAIKSFELRQYAP-- 115 + LA A+++ + M + GS + + + I + R A Sbjct: 104 DIVLAQGADQSGMPMIISGSSLIPLEEIAAVSPQAWFQAYLPGEPDRIDALVDRVAAAGI 163 Query: 116 HTVLISNLGAVQLNYDFGVQKAH------------------QAVHVLGADGLFLHLNPLQ 157 T+L++ A N + V+ + + H P Sbjct: 164 RTLLLTVDTATLPNRENNVRAGFSTPLRPGLRLAWQGISHPRWTTGTFLRTIVRHGIPHF 223 Query: 158 E---------IIQPNGNTNF----ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 E II N +F + + L++K + + D + Sbjct: 224 ENSYATRGAPIISSNVTRDFGRRDHLNWEHLERIRKRWSGTLVVKGI---MHPDDAARAV 280 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 +G ++ GG S + +I Sbjct: 281 DTGADGVIVSNHGGRQLDGTASPLQVLPEIA 311 >gi|254447532|ref|ZP_05060998.1| glutamate synthase, large subunit [gamma proteobacterium HTCC5015] gi|198262875|gb|EDY87154.1| glutamate synthase, large subunit [gamma proteobacterium HTCC5015] Length = 1490 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 37/184 (20%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT S + S R S + Sbjct: 1002 KAQISVKLVAEAGVGTIAAGVAKAYADLITISGYDGGTGASPLTSVRYAGSP-----WEL 1056 Query: 242 GIP-TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL-------- 291 G+ T +L A + + A GGL+ G+D++K+ ILGA G P + Sbjct: 1057 GLSETHQTLR-ANDLREKVRVQADGGLKTGLDVIKAAILGAESFGFGTGPMVALGCKYLR 1115 Query: 292 --------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K ++ V+ + +E M LG ++ +L T Sbjct: 1116 ICHLNNCATGVATQQNVLRFKHFRGDAEKVMNYFTFIAQEAREIMASLGISKLTDLIGRT 1175 Query: 332 ALIR 335 L+ Sbjct: 1176 DLLE 1179 >gi|312148632|gb|ADQ31287.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi JD1] Length = 404 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|251782305|ref|YP_002996607.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390934|dbj|BAH81393.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127202|gb|ADX24499.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 327 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA-IAAE 84 ++D LI S + D SV + P++ M I+ +A A+ Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAGQLAK 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + D ++ K F R + + ++G Y+F A + Sbjct: 63 EGYF------YIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDAPEFI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + I + + + ++ G + + Sbjct: 117 TIDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V E+ ++ Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|306827361|ref|ZP_07460648.1| GMP reductase [Streptococcus pyogenes ATCC 10782] gi|304430508|gb|EFM33530.1| GMP reductase [Streptococcus pyogenes ATCC 10782] Length = 334 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA-IAAE 84 ++D LI S + D SV + P++ M I+ +A A+ Sbjct: 17 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAGQLAK 69 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + D ++ K F R + + ++G Y+F A + Sbjct: 70 EGYF------YIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDAPEFI 123 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H N + I + + + ++ G + + Sbjct: 124 TIDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELE 166 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 167 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIAD 215 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F V E+ ++ Sbjct: 216 GGIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVNGETFKE 261 >gi|217977052|ref|YP_002361199.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] gi|217502428|gb|ACK49837.1| ferredoxin-dependent glutamate synthase [Methylocella silvestris BL2] Length = 507 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 66/201 (32%), Gaps = 50/201 (24%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV----GCGLSS 197 + G G+ + + + P N+N +L I + + P+ +K V G Sbjct: 255 EIAGIRGIPIGEDSISPNRHPEINSND-ELLDFIERVKTITRKPVGVKAVLGAYGWLEDL 313 Query: 198 MDIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP-- 254 M L +G +F + +G GGT + + + G+P SL + R Sbjct: 314 MAKVLARGAGPDFFTLDSGDGGT-----------GAAPMALMDNVGLPIRESLPLVRDII 362 Query: 255 ----YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 IASG L D+ ++ GA+ A F Sbjct: 363 KNHGLAERIPIIASGKLTTPADVAWALCAGATFVNSARGF-------------------- 402 Query: 311 EFIVSMFLLGTKRVQELYLNT 331 MF LG +Q L N Sbjct: 403 -----MFALGC--IQSLKCNK 416 >gi|195942065|ref|ZP_03087447.1| inositol-5-monophosphate dehydrogenase [Borrelia burgdorferi 80a] Length = 404 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCKRTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|320160262|ref|YP_004173486.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila UNI-1] gi|319994115|dbj|BAJ62886.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila UNI-1] Length = 481 Score = 60.7 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 22/132 (16%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + L + VP++ V ++ + ++G + G+ Sbjct: 260 VLDMLRTLKKKLSVPIIAGNVA---TAEGVRDLAEAGADAVKVGVGAGSIC--------- 307 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLAS 288 I V +GIP ++ IA GG+RN D++K++ GAS Sbjct: 308 ---ITRVVTGFGIPQLTAILECAREGQRLGVPIIADGGVRNSGDLVKALAAGASTV---- 360 Query: 289 PFLKPAMDSSDA 300 L A+ +D Sbjct: 361 -MLGSALAGTDE 371 >gi|261350727|ref|ZP_05976144.1| glutamate synthase domain protein [Methanobrevibacter smithii DSM 2374] gi|288861511|gb|EFC93809.1| glutamate synthase domain protein [Methanobrevibacter smithii DSM 2374] Length = 545 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 104/281 (37%), Gaps = 41/281 (14%) Query: 26 FDDWHLIHRAL---PEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIERIN 76 +DD ++ L P EV + +GK + P+ +S M+ G +I Sbjct: 182 WDDILILGNQLNPMPLEEDAEVS-ATTVIGKNAEKPLVIENPVYVSHMSYGALSKESKI- 239 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGVQ 135 LA + K K AM G ++ NA + ++V NL + + Sbjct: 240 -ALAKGSFKAKTAMCSGEGGILPEVKNAAYKYIFEYVPNKYSVTDENLKTSD-AIEIKIG 297 Query: 136 KAHQAV-------HVLGADGLFLHLN-PLQEIIQPNGNTNF---ADLSSKIALLS-SAMD 183 +A + + + + ++II P+ N DL + L + Sbjct: 298 QATKPGMGGLLPGDKVTPEIAKVRGKKAGEDIISPSRFPNINSKKDLKDLVDELRLKSEG 357 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K + G D+E + + + GRGG + + RD S I Sbjct: 358 RPIGIK-IAAGHIENDLEFISCAKPDFITVDGRGGATGASPLLVRDSTS----------I 406 Query: 244 PTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILG 280 PT +L AR Y + + + +GGLR D K++ +G Sbjct: 407 PTIFALHRARKYLDEHDLDIDLVITGGLRVSSDFAKALAMG 447 >gi|66475150|ref|XP_625342.1| inosine-5-monophosphate dehydrogenase [Cryptosporidium parvum Iowa II] gi|46226347|gb|EAK87356.1| inosine-5-monophosphate dehydrogenase [Cryptosporidium parvum Iowa II] Length = 402 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 67/307 (21%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIA-- 82 F+D L+ E+ EV + L PL+ S+M + + +L Sbjct: 14 FEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAM--------DTVTEHLMAVGM 64 Query: 83 AEKTKVA-----MAVGSQ----------RVMFSDHNAIKSFELRQYAPHTVL-------- 119 A + M + SQ + + L + + Sbjct: 65 ARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNID 124 Query: 120 ------ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + N G +++ GV + +A ++ A + L+ + + ++ Sbjct: 125 AYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSA--------HGHSLNIIR 176 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + S M++ ++ VG ++ + +++G + G+ + Sbjct: 177 TLKEIKSKMNIDVI---VGNVVTEEATKELIENGADGIKVGIGPGSICTT---------- 223 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P ++E ++ IA GG+R DI K++ +GAS + L Sbjct: 224 --RIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSV-MIGSIL 280 Query: 292 KPAMDSS 298 +S Sbjct: 281 AGTEESP 287 >gi|330951133|gb|EGH51393.1| L-lactate dehydrogenase [Pseudomonas syringae Cit 7] Length = 284 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 76/263 (28%), Gaps = 59/263 (22%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N D L R L + D V G+ L+ P+++S + G + Sbjct: 29 AYAEHTLRTNGSDLADISLRQRVLK--NVDNVSLETRLFGESLAMPIVLSPV-GLSGMYA 85 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS-----FEL-----RQYAPHTVLISN 122 R A AA ++ + + V + A +S F+L R + + + + Sbjct: 86 RRGEVQAAKAAANKRIPFCLSTVSVCSIEEVASQSKQAIWFQLYVLKDRGFMKNALERAR 145 Query: 123 LGAVQ---LNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPN------------- 163 V D A + G + LQ + +P+ Sbjct: 146 AAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRI--LQAMTKPDWALNVGLLGRPHD 203 Query: 164 ------------GNTNFADLS----------SKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ +A + + P+++K + L D Sbjct: 204 LGNISRYLGKATTLEDYVGWLADNFDPSISWKDLAWIREFWEGPMIIKGI---LDPQDAR 260 Query: 202 LGLKSGIRYFDIAGRGGTSWSRI 224 L G ++ GG + Sbjct: 261 DALSFGADGIVVSNHGGRQLDGV 283 >gi|281306995|pdb|3FFS|A Chain A, The Crystal Structure Of Cryptosporidium Parvum Inosine-5'- Monophosphate Dehydrogenase gi|281306996|pdb|3FFS|B Chain B, The Crystal Structure Of Cryptosporidium Parvum Inosine-5'- Monophosphate Dehydrogenase gi|281306997|pdb|3FFS|C Chain C, The Crystal Structure Of Cryptosporidium Parvum Inosine-5'- Monophosphate Dehydrogenase gi|281306998|pdb|3FFS|D Chain D, The Crystal Structure Of Cryptosporidium Parvum Inosine-5'- Monophosphate Dehydrogenase gi|18996773|gb|AAL83208.1|AF426177_1 inosine-5-monophosphate dehydrogenase [Cryptosporidium parvum] gi|32398644|emb|CAD98604.1| inosine-5'-monophosphate dehydrogenase, probable [Cryptosporidium parvum] gi|323509017|dbj|BAJ77401.1| cgd6_20 [Cryptosporidium parvum] gi|323510309|dbj|BAJ78048.1| cgd6_20 [Cryptosporidium parvum] Length = 400 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 67/307 (21%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIA-- 82 F+D L+ E+ EV + L PL+ S+M + + +L Sbjct: 12 FEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAM--------DTVTEHLMAVGM 62 Query: 83 AEKTKVA-----MAVGSQ----------RVMFSDHNAIKSFELRQYAPHTVL-------- 119 A + M + SQ + + L + + Sbjct: 63 ARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNID 122 Query: 120 ------ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + N G +++ GV + +A ++ A + L+ + + ++ Sbjct: 123 AYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSA--------HGHSLNIIR 174 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + S M++ ++ VG ++ + +++G + G+ + Sbjct: 175 TLKEIKSKMNIDVI---VGNVVTEEATKELIENGADGIKVGIGPGSICTT---------- 221 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P ++E ++ IA GG+R DI K++ +GAS + L Sbjct: 222 --RIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSV-MIGSIL 278 Query: 292 KPAMDSS 298 +S Sbjct: 279 AGTEESP 285 >gi|317129504|ref|YP_004095786.1| guanosine monophosphate reductase [Bacillus cellulosilyticus DSM 2522] gi|315474452|gb|ADU31055.1| guanosine monophosphate reductase [Bacillus cellulosilyticus DSM 2522] Length = 327 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 88/281 (31%), Gaps = 44/281 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V F G P++ M I+ +AI Sbjct: 7 YEDIQLIPAKSVVNSRSECDTTVTFGGHTFQLPVV-------PANMQTIIDEKIAI---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 +A + SF ++ ++ S +G + YDF Q A + Sbjct: 56 -YLAENGYFYIMHRFQPEKRVSF-IKDMKERGLIASISVGVKEEEYDFIAQLASENLIPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ + + ++ G + + Sbjct: 114 FITIDIAHGHSNAVIEMIQ---------------HIKKHIPKSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R DI KS+ GAS+ + S F + V Sbjct: 206 ADGGIRTHGDIAKSVRFGASMVMIGSLFAGHEESPGETVEK 246 >gi|104773462|ref|YP_618442.1| inosine-5-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513449|ref|YP_812355.1| IMP dehydrogenase/GMP reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422543|emb|CAI97136.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092764|gb|ABJ57917.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 385 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 95/292 (32%), Gaps = 62/292 (21%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI LP +EVD S + KL+ PL+ + M T +M A Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTQLAPNLKLNIPLISAGMDTVTEGRMA-------A 63 Query: 81 IAAEKTKVAMAVGSQRVMFSDHN----------AIKSFELRQYAPHTVLISNLGAVQLNY 130 A+ + + + + A ++ ++ + +G + Sbjct: 64 AMAKMGGLGVVHKNLSIQAQADEVRLAKNTPVTAEDTYAAVDKDGKLLVAAAVGVTSDTF 123 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + +A+ GAD + + + + A + KI + L+ Sbjct: 124 ER-----AKALFEAGADAIVI----------DTAHGHSAGVLRKIKEIRDHFPHNTLIG- 167 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 G ++ ++G+ + G+ + V G+P ++ Sbjct: 168 -GNVATAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAIY 214 Query: 251 MARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 A E IA GG++ D++K++ G + L + ++ Sbjct: 215 DAADVAREFGKPIIADGGIKYSGDVVKALAAGGNAV-----MLGSMLSGTEE 261 >gi|218670829|ref|ZP_03520500.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Rhizobium etli GR56] Length = 220 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 20/110 (18%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A + A LK + +S D + ++ G ++ GG S D Sbjct: 131 WDDVAEMVRAWGGHFCLKGI---MSVEDAKRAVEIGCTGIVLSNHGGRQLDGSRSAFDQL 187 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 ++I + + GG++ G +LK++ LGA Sbjct: 188 AEI-----------------VDAVGDRIDVMMDGGVQRGTHVLKALSLGA 220 >gi|226312571|ref|YP_002772465.1| hypothetical protein BBR47_29840 [Brevibacillus brevis NBRC 100599] gi|226095519|dbj|BAH43961.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 492 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 106/358 (29%) Query: 43 EVDPSVEF---LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 ++D + K LS + I M GG I +EK K+A+A G+ V Sbjct: 116 DIDMRITIGPQAKKPLSLEIPI--MAGGMGYGIG--------VSEKAKIAIAKGTAAVGT 165 Query: 100 SDHNAIKSF--ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN--- 154 + F E RQ A H ++ + G + + AD + +H+ Sbjct: 166 LTNTGEGGFLPEERQNAKHLIIQYHSGKWSKEPEI----------LKQADAIEIHIGQGA 215 Query: 155 -------PLQEIIQPNGNT-----------------------NFADLSSKIALLSSAMDV 184 E +Q + + + L+ + Sbjct: 216 IAGAGSFIPSEYVQGRARKILKVENDDYVVIPSRHKDINKPQDLRKVVDHLRALTG--GI 273 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P+ +K D+E+ + +G+ + I G S I+ D+GIP Sbjct: 274 PIGVKICASAKIEADLEVAIFAGVDFVSIDGGQAGSKGGPP----------ILEDDFGIP 323 Query: 245 TPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP----- 293 T ++ R + ++ GG D LK+ LG + + L Sbjct: 324 TIYAVSRAVHYLQKRGMKEKITLLSGGGYFTPSDCLKAFALGVDGVYMGTALLWAMTHDQ 383 Query: 294 ---------------------AMDSSDAVVAAIESLR----KEFIVSMFLLGTKRVQE 326 A +E+ +E V++ LG V + Sbjct: 384 VTKAIPWEPPTQLVFYPGSLTAQFDEQEAAKYLENFLTSFVEEMKVAILALGKTSVHQ 441 >gi|11497009|ref|NP_047003.1| inositol-5-monophosphate dehydrogenase [Borrelia burgdorferi B31] gi|1352459|sp|P49058|IMDH_BORBU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|7546356|pdb|1EEP|A Chain A, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi Inosine 5'-Monphosphate Dehydrogenase In Complex With A Sulfate Ion gi|7546357|pdb|1EEP|B Chain B, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi Inosine 5'-Monphosphate Dehydrogenase In Complex With A Sulfate Ion gi|532792|gb|AAA53247.1| IMP dehydrogenase [Borrelia burgdorferi] gi|2689886|gb|AAC66314.1| IMP dehydrogenase (guaB) [Borrelia burgdorferi B31] Length = 404 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|328956499|ref|YP_004373885.1| guanosine 5'-monophosphate oxidoreductase [Carnobacterium sp. 17-4] gi|328672823|gb|AEB28869.1| guanosine 5'-monophosphate oxidoreductase [Carnobacterium sp. 17-4] Length = 324 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 88/267 (32%), Gaps = 42/267 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D ++EF G+K + P++ M I+ LAI + Sbjct: 6 YEDVQLIPNKSIVSSRSECDTTIEFGGRKFNLPVV-------PANMQTVIDETLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D F + N + + GV+ A + L Sbjct: 59 NNFFYVM-----HRFDEEDRIPF---------IQRMNEKGLYSSISVGVKAAEYTFIETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + N + E I + +DL + I + + L+ G + + Sbjct: 105 AKE------NLVPEYITIDIAHGHSDLVINMIHHIKKYLPGTFLI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AALRLCAKAARK-PLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KSI GAS+ + S F Sbjct: 206 DGGVRDHGDIAKSIRFGASMVMMGSLF 232 >gi|124026230|ref|YP_001015346.1| inositol-5-monophosphate dehydrogenase [Prochlorococcus marinus str. NATL1A] gi|123961298|gb|ABM76081.1| putative IMP dehydrogenase [Prochlorococcus marinus str. NATL1A] Length = 387 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 68/241 (28%), Gaps = 64/241 (26%) Query: 138 HQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 V GAD FL + E + G+ N + L + +P+ VG ++ Sbjct: 146 KNLVKDSGADLFFLQATVVSTEHLGKEGSQNL-----DLYDLCENIGIPV---AVGNCVT 197 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +K+G + G + + GIP ++ Sbjct: 198 YEVSLKLMKAGAAAVMVGIGPGAACT------------SRGVLGVGIPQATAISDCAAAR 245 Query: 257 NE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF------------------ 290 ++ IA GG+ G DI K I GA + SP Sbjct: 246 DDFQKESGKYVPIIADGGIITGGDICKCIACGADSVMIGSPIARSQEAPGKGFHWGMATP 305 Query: 291 -----------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 LK + + +L SM LG ++E+ + Sbjct: 306 SPVLPRGTRIQVGTTGSLKSILCGPAILDDGTHNLLGAIKTSMGTLGATNIKEMQNVEVV 365 Query: 334 I 334 I Sbjct: 366 I 366 >gi|83313553|ref|YP_423817.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82948394|dbj|BAE53258.1| L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 384 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 22/114 (19%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L LL+K + +++ D L G ++ GG + D Sbjct: 235 WDDVRALRDLWQGRLLIKGI---MTAADARTALDLGADGIWVSNHGGRQLDAAPAAID-- 289 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFI-ASGGLRNGVDILKSIILGASLG 284 SL R + I G +R+G D++++ GA Sbjct: 290 ----------------SLAAIRAALGKEAVILMDGSIRSGEDVVRAGATGADFV 327 >gi|163841569|ref|YP_001625974.1| lactate 2-monooxygenase [Renibacterium salmoninarum ATCC 33209] gi|162955045|gb|ABY24560.1| lactate 2-monooxygenase [Renibacterium salmoninarum ATCC 33209] Length = 78 Score = 60.3 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D++K+++LGA G+ P++ + + V I S+ E + M + G + Sbjct: 6 GVRTGTDVVKALVLGAKAVGIGRPYVYGLTLSGAAGVEHVIRSILAEADLLMAVDGYASI 65 Query: 325 QELYLN 330 EL + Sbjct: 66 AELTRD 71 >gi|254514158|ref|ZP_05126219.1| glutamate synthase, large subunit [gamma proteobacterium NOR5-3] gi|219676401|gb|EED32766.1| glutamate synthase, large subunit [gamma proteobacterium NOR5-3] Length = 446 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 46/306 (15%) Query: 27 DDWHLIHRALPEISFDEVD--PSVEFLGKKLSFP-----LLISSMTGGN--NKMIERINR 77 D + + ++ +D P V+ G + P L IS+M+ G+ + + +NR Sbjct: 28 DGYEWMGHSIAARDISAMDHNPRVKIGGIHCTQPYSAALLNISAMSFGSLSSNAVRALNR 87 Query: 78 NLA----------------IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 A + + +G+ + S T + Sbjct: 88 GAALGNFYHNTGEGGVSDFHCEHEGDLVWQIGTGYFGCRSDDGRFSAA---GFAKTAQRT 144 Query: 122 NLGAVQLNYDFGVQ----KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSK 174 N+ +++ G + A H+ E++ P+ ++ F L Sbjct: 145 NIKMIEIKLSQGAKPGHGGILPASKNTDLIARIRHVPVGTEVVSPSAHSAFSTPRGLLEF 204 Query: 175 IALLSSAMDV-PLLLKEVGCGLSSMDI--ELGLKSG--IRYFDI-AGRGGTSWSRIESHR 228 + L P+ K S + L++G + + G GGT + +E Sbjct: 205 VQQLRELSGGKPVGFKLCVGRESEFIAICKAMLETGIMPDFVTVDGGEGGTGAAPLE--- 261 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + +G+ +D G+ ++ + IASG + D+ K++ LGA L A Sbjct: 262 -YSNSVGMPLRD-GLAFVVNTLEGFGVREHIRVIASGKVFTAFDMAKALALGADLCNSAR 319 Query: 289 PFLKPA 294 L Sbjct: 320 GMLLAL 325 >gi|320354974|ref|YP_004196313.1| glutamate synthase (NADPH) large subunit [Desulfobulbus propionicus DSM 2032] gi|320123476|gb|ADW19022.1| glutamate synthase (NADPH) large subunit [Desulfobulbus propionicus DSM 2032] Length = 1482 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT+ S I S R S + + Sbjct: 996 VSVKLVSRPGIGTIAAGVAKAYADLITVSGYDGGTAASPISSIRHAGSPWELGLAEVHQT 1055 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 A ++ + GGL+ G+D++K+ +LGA G +P + Sbjct: 1056 -----LQANDLRDKIRVQTDGGLKTGLDVIKAALLGAESFGFGTAPMISLGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + D V+ L +E M LLG +R+++L Sbjct: 1111 NNCATGVATQRDDLRRDHYRGTVDKVLNYFRFLAEETREWMALLGVRRLEDL 1162 >gi|295698338|ref|YP_003602993.1| inosine-5'-monophosphate dehydrogenase [Candidatus Riesia pediculicola USDA] gi|291157005|gb|ADD79450.1| inosine-5'-monophosphate dehydrogenase [Candidatus Riesia pediculicola USDA] Length = 489 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 58/219 (26%), Gaps = 71/219 (32%) Query: 171 LSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + K+ + ++P++ V + +++G + G+ + Sbjct: 253 VLKKVFEIKKKYPNLPIIGGNVA---TPEGALDLVQAGADAVKVGIGPGSICTT------ 303 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + GIP T +S + IA GG++ DI K+I GA + Sbjct: 304 ------RIVTGVGIPQITAISESADALLKTQVPVIADGGIKFSGDIGKAIAAGAKCV-ML 356 Query: 288 SPFLKPAMDSSDAVV--------------------------------------------- 302 L + +S +V Sbjct: 357 GSILASSQESIGKLVIYKDKFYKIYRGMGSRESMINGSYDRYLQLKDVNKLVPEGVKGQV 416 Query: 303 -------AAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + M L G + +L NT I Sbjct: 417 LYQGTLKEIVNQMIGGLRSCMRLTGCNNIDQLQTNTKFI 455 >gi|325473313|gb|EGC76508.1| hypothetical protein HMPREF9353_02303 [Treponema denticola F0402] Length = 292 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 32/253 (12%) Query: 62 SSMTGGNNKMIERINR----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 + MTG + R +L A+ K +A+++G + I+ LR Sbjct: 60 APMTGAVENVGYEDERQFYFDLIRASVKAGLALSIGDGYPDLKLFSGIE--ALRDVKKKG 117 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + Q+ ++ + ++ ++G D ++ ++ ++ + +A Sbjct: 118 AVFLK-PYPQMKLFERIEASMESAEIIGVDTDAYNIVTMRNLVHLE-----KKSAKDLAA 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L +P +K + +S DIE+ + I+ GG IE+ R + Sbjct: 172 LKKYAKLPFAVKGI---FTSYDIEVVKELKPDIAIISNHGGR----IETDRGSVASFAHS 224 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 L+ + Y E A GGLR D + + LG + P + + Sbjct: 225 H----------LKEIKKYSGE--VWADGGLRKREDFMAASSLGIEEVLIGRPCITALLRD 272 Query: 298 SD-AVVAAIESLR 309 + + I+S+ Sbjct: 273 RENGIKNFIDSIL 285 >gi|225576381|ref|YP_002725399.1| inosine-5'-monophosphate dehydrogenase [Borrelia sp. SV1] gi|225547495|gb|ACN93474.1| inosine-5'-monophosphate dehydrogenase [Borrelia sp. SV1] Length = 404 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 103/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPKIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ P+ ++N V + + ++ A L ++ Sbjct: 128 KEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + G + G+ + Sbjct: 176 GHSTRIIELVKTIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEACKSTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|116071055|ref|ZP_01468324.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. BL107] gi|116066460|gb|EAU72217.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. BL107] Length = 387 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 107/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ + S G P++ S+M G Sbjct: 2 DIQLGRSKTVRRAYGIDEIALVPGGRTVDPEVT----NTSWSLGGITREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N L A K V + ++S Sbjct: 58 VDVDMAVRLSELGALGVLNLEGVQTRYEDPNAVLDRIAAVGKTEF-VPLMQEIYSQPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNG 164 + +R+ + AV + +A+ GAD F+ + I P G Sbjct: 117 Q--LIRKRIQDIKAQGGIAAVS-GTPVAAMRFRKAIAEAGADLFFVQATVVSTNHIGPEG 173 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + L M +P+++ G ++ +++G + G + + Sbjct: 174 QDTL-----DLEELCQGMGLPVVI---GNCVTYEVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + +A GG+ G DI K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADFQKESGRYVPIVADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPFLKP-----------------------------------AMDSSDAV 301 I GA + SP + + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSIERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + + E+ ++ Sbjct: 334 DDGTHNLLGCLKTSMGTLGARTIAEMQTVEVVV 366 >gi|322385282|ref|ZP_08058928.1| GMP reductase [Streptococcus cristatus ATCC 51100] gi|321270705|gb|EFX53619.1| GMP reductase [Streptococcus cristatus ATCC 51100] Length = 344 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 83/277 (29%), Gaps = 40/277 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+F P++ + M I+ ++A Sbjct: 27 YEDIQLIPAKCIVKSRSEADTSVKFGKHTFRMPVV-------PSNMQTIIDESVAE---- 75 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D K F R + + ++G YDF A + Sbjct: 76 -ELARGGYFYIMHRFDEEGRKPFVKRMHEQGLIASISVGVKDYEYDFVSSLKDDAPEYIT 134 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + ++ G + + Sbjct: 135 IDIAHGHSD---------------SVIQMIQHIKKELPETFVI--AGNVGTPEAVRELEN 177 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 178 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQLS---ALRWCSKVARK-PIIADG 226 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 G+R DI KSI GAS+ + S F + + Sbjct: 227 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGETIE 263 >gi|299537748|ref|ZP_07051037.1| 2-nitropropane dioxygenase [Lysinibacillus fusiformis ZC1] gi|298726727|gb|EFI67313.1| 2-nitropropane dioxygenase [Lysinibacillus fusiformis ZC1] Length = 335 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 90/265 (33%), Gaps = 51/265 (19%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 F + +P++ + M G + A + + +GS + D Sbjct: 2 LQTTF---DMRYPIIQAPMAGVTSP-------KFVAACAEAGL---LGSIGAGYLDGEQT 48 Query: 106 KSF--ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 K F E+++ + NL VQ ++ QA L L L+P+Q + Sbjct: 49 KQFIQEVKKLTTKPFAV-NLF-VQEEPKIDIEVLQQARMALQPFYDELGLSPVQSVTSKE 106 Query: 164 GNTNFAD----LSSKIALLSSA---MDVPLLLKE--------VGCGLSSMDIELGLKSGI 208 FA + + + S + P +LK+ +G + + L ++G+ Sbjct: 107 ---VFAGQVQAVIEEKVAICSFTFGLPSPAVLKQLKEHGVYTIGTATTLEEAILVEQAGM 163 Query: 209 RYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + G GG HR +D + IP L IA+GG Sbjct: 164 DAVVLQGGEAGG--------HRGSFTDPLQL-----IP-LHDLLQQVVGKVAIPIIAAGG 209 Query: 267 LRNGVDILKSIILGASLGGLASPFL 291 L DI K++ GA + + L Sbjct: 210 LVTKADIQKALESGAQAVQIGTALL 234 >gi|332704172|ref|ZP_08424260.1| Glutamate synthase (ferredoxin) [Desulfovibrio africanus str. Walvis Bay] gi|332554321|gb|EGJ51365.1| Glutamate synthase (ferredoxin) [Desulfovibrio africanus str. Walvis Bay] Length = 1532 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 33/270 (12%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV----------A 89 + D+VD S+ G+ PL+IS+M+ G+ E R A A K + Sbjct: 868 AMDDVDISI---GQH-DMPLVISAMSFGSQ--GENSFRVYAEAGRKANIVCMNGEGGEIP 921 Query: 90 MAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD 147 +G R A F + L +G + G + + Sbjct: 922 DMLGLYRHNRGQQIASGRFGVSMEFLNSANFLEIKIGQGAKPGEGGHLPGTKVTPKV--- 978 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIEL 202 H P +I P+ + + + + + + + + +K Sbjct: 979 AQARHCKPGVTLISPSNHHDIYSIED-LHQIITELKTANPTARISVKIPVTSGVGTIAVG 1037 Query: 203 GLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 K+G ++G GGT + R+ + + G+ + Sbjct: 1038 VAKAGANIVTLSGFEGGTG-----AAREHAKKYVGLPAEIGVSEAHRALCESGLRRSVEL 1092 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL 291 GG+R+G D+++ ++LGA GL + L Sbjct: 1093 WCDGGMRSGADVVRMVLLGADRVGLGTVAL 1122 >gi|322411671|gb|EFY02579.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 327 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F A + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPAAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|19746082|ref|NP_607218.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS8232] gi|45476954|sp|Q8P129|GUAC_STRP8 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|19748254|gb|AAL97717.1| putative GMP reductase [Streptococcus pyogenes MGAS8232] Length = 327 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDTPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVNGETFKE 254 >gi|57012766|sp|Q5XC75|GUAC_STRP6 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|150383454|sp|Q1JBS5|GUAC_STRPB RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|150383455|sp|Q1JLQ8|GUAC_STRPC RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|150383457|sp|Q1J6M7|GUAC_STRPF RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase Length = 327 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDTPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVNGETFKE 254 >gi|78184298|ref|YP_376733.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. CC9902] gi|78168592|gb|ABB25689.1| IMP dehydrogenase related 2 [Synechococcus sp. CC9902] Length = 387 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 107/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ + S G P++ S+M G Sbjct: 2 DIQLGRSKTVRRAYGIDEIALVPGGRTVDPEVT----NTSWSLGGITREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N L A K V + ++S Sbjct: 58 VDVDMAVRLSELGALGVLNLEGVQTRYEDPNAVLDRIAAVGKTEF-VPLMQEIYSQPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNG 164 + +R+ + AV + +A+ GAD F+ + I P G Sbjct: 117 Q--LIRKRIQDIKAQGGIAAVS-GTPVAAMRFRKAIAEAGADLFFVQATVVSTNHIGPEG 173 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + L M +P+++ G ++ +++G + G + + Sbjct: 174 QATL-----DLEELCQGMGLPVVI---GNCVTYEVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + +A GG+ G DI K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADFQKESGRYVPIVADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPFLKP-----------------------------------AMDSSDAV 301 I GA + SP + + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSIERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + + E+ ++ Sbjct: 334 DDGTHNLLGCLKTSMGTLGARTIAEMQTVEVVV 366 >gi|50914199|ref|YP_060171.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS10394] gi|94988604|ref|YP_596705.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS9429] gi|94992428|ref|YP_600527.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS2096] gi|94994402|ref|YP_602500.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes MGAS10750] gi|50903273|gb|AAT86988.1| GMP reductase [Streptococcus pyogenes MGAS10394] gi|94542112|gb|ABF32161.1| GMP reductase [Streptococcus pyogenes MGAS9429] gi|94545936|gb|ABF35983.1| GMP reductase [Streptococcus pyogenes MGAS2096] gi|94547910|gb|ABF37956.1| GMP reductase [Streptococcus pyogenes MGAS10750] Length = 334 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 17 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 69 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F + Sbjct: 70 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDTPEFIT 124 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 125 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 167 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 168 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 216 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 217 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVNGETFKE 261 >gi|220936191|ref|YP_002515090.1| Glutamate synthase (ferredoxin) [Thioalkalivibrio sp. HL-EbGR7] gi|219997501|gb|ACL74103.1| Glutamate synthase (ferredoxin) [Thioalkalivibrio sp. HL-EbGR7] Length = 1485 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + G+ Sbjct: 1000 VSVKLVSEAGVGTVAAGVAKAYADLITISGYDGGTGASPLTSV-----KYAGTPWELGLS 1054 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 A ++ + GGL+ G+D++K+ ILGA G P + Sbjct: 1055 EAQVTLRANDLRDKVRLQTDGGLKTGLDVIKAAILGAESFGFGTGPMVALGCKYLRICHL 1114 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + + +E M LG K + +L T L+ Sbjct: 1115 NNCATGVATQDNVLRMNHFIGLPEMVMHYFQFVARETREWMASLGVKSLTDLIGRTDLLE 1174 Query: 336 H 336 Sbjct: 1175 R 1175 >gi|225174772|ref|ZP_03728770.1| Glutamate synthase (NADPH) [Dethiobacter alkaliphilus AHT 1] gi|225169899|gb|EEG78695.1| Glutamate synthase (NADPH) [Dethiobacter alkaliphilus AHT 1] Length = 499 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 112/344 (32%), Gaps = 83/344 (24%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L P++ S+M+ G+ + ++LA AAE S+ ++ +L Sbjct: 161 LELELPIMFSAMSFGSISLNAI--KSLAAAAE---------SESTFYNTGEGGLHKDLYC 209 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHV------------------LGADGLFLHLN 154 Y +T I+ + + + D +A A+ + +G+ + Sbjct: 210 YGKNT--ITQVASGRFGVDIDYLQAGAAIEIKIGQGAKPGIGGHLPGEKVGSGVSETRMI 267 Query: 155 P-LQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 P + I P + + + L+ ++ P+ +K + ++G Sbjct: 268 PIGSDAISPAPHHDIYSIEDLTQLIFSLKEATEYTKPVSVKIAAVHNVAAIASGIARAGA 327 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFI 262 I G G + + RD GIP L+L E + Sbjct: 328 DIIAIDGYRGGTGATPLRTRDH----------VGIPIELALAAVDTRLRQEGIRQEVSLV 377 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKP------------------AMDSSDAV--- 301 GG+R+ D++K+I LGA + + L A + + V Sbjct: 378 VGGGIRHSADVVKAIALGADAAYIGTSALIALGCHVCQQCYTGKCNWGIATQNPELVKRL 437 Query: 302 ---------VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + E + +G ++ L N ++R Sbjct: 438 NPEIGARRAANLLRAWKHEIKELLGGMGINALESLRGNRLMLRG 481 >gi|220934872|ref|YP_002513771.1| ferredoxin-dependent glutamate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219996182|gb|ACL72784.1| ferredoxin-dependent glutamate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 448 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 30/146 (20%) Query: 164 GNTNFADLSSKIALLSS-----AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI----A 214 + ++ LS VP+ +K VG D++L + +G + Sbjct: 198 RHPDWTGSDDLAIKLSELREITDWQVPIYVK-VGATRVKNDVKLAVAAGADVVVVDGMQG 256 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIASGGLR 268 G T IE GIPT +L A + Q I SGG+R Sbjct: 257 GTAATQQVFIEHA--------------GIPTLAALRQAVEALEEIDMVGQVQLIISGGIR 302 Query: 269 NGVDILKSIILGASLGGLASPFLKPA 294 +G D+ K++ +GA + + Sbjct: 303 SGADVAKALAMGADAVSIGQAAMMAL 328 >gi|33519976|ref|NP_878808.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia floridanus] gi|33504322|emb|CAD83214.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia floridanus] Length = 489 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 85/296 (28%), Gaps = 82/296 (27%) Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 K FE + P+ N G +++ GV A + A+ L +N Sbjct: 192 HLKGMITAKDFEKAERKPNACK-DNYGRLRVGAAIGVS----ADYKYRANAL---VNAGV 243 Query: 158 EIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 +I+ + + ++ + + D+P++ G ++ +++G+ + Sbjct: 244 DILLIDSSHGHSESVLRCVSYVRKLYPDLPIIG---GNVVTEEGALALIEAGVSAVKVGI 300 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDI 273 G+ + V GIP T +S IA GG+R DI Sbjct: 301 GPGSICTT------------RVVTGVGIPQITAISDVSKALKYTNIPVIADGGIRFSGDI 348 Query: 274 LKSIILGASLGGLASPFL------------------------------------------ 291 K+I GA + L Sbjct: 349 AKAIAAGAHCV-MIGSLLAGTEESPGDIEFYQGRSFKSYRGMGSLGAMNQGSSDRYFQQN 407 Query: 292 -----KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + V + I L M L G + +L + T +R Sbjct: 408 ENINSKLVPEGIEGRVIYKGKVKSIIHQLMGGLRSCMGLTGCLTIDDLRIKTKFVR 463 >gi|87300527|ref|ZP_01083369.1| putative glutamate synthetase [Synechococcus sp. WH 5701] gi|87284398|gb|EAQ76350.1| putative glutamate synthetase [Synechococcus sp. WH 5701] Length = 531 Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 43/265 (16%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 +L PLL+S M+ G + + LA AE+ + G + M + A L + Sbjct: 184 LRLEIPLLVSDMSFGALSEEAK--QALATGAERAGTGICSG-EGGMLPEEQAANHRYLYE 240 Query: 113 YAPHTV-----LISNLGAVQLNYDF-----------GVQKAHQAVHVLGADGLFLHLNPL 156 AP ++S + A G + + + G +P Sbjct: 241 LAPAMFGYREEVLSQVQAFHFKAGQAAKTGTGSHLPGAKVTARIAEIRGIPEGQPSCSPA 300 Query: 157 --QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 ++ P +F ++ LS +P+ +K + D++ L++G+ Y + Sbjct: 301 VFSDLHSPA---DFRAFGDRVRELSG--GIPVGMKLSAQHIEH-DLDFALEAGVDYLILD 354 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLR 268 GRGG + RD + +PT +L AR + I +GGLR Sbjct: 355 GRGGGTGGAPLLFRDHIA----------VPTIPALARARAHLDRSGVGGQVTLIVTGGLR 404 Query: 269 NGVDILKSIILGASLGGLASPFLKP 293 D +K++ LGA LA+ ++ Sbjct: 405 TPADCIKALALGADGVALANAAIQA 429 >gi|148241838|ref|YP_001226995.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. RCC307] gi|147850148|emb|CAK27642.1| IMP dehydrogenase/GMP reductase [Synechococcus sp. RCC307] Length = 387 Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 101/395 (25%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 DIQLGRSRTVRRAYGIDEIALVPGGRTVDPEVT----DTRWSLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTK---VAMAVGSQRVMFSDH 102 G E N L A K V + + Sbjct: 58 VDVGMAVKLSQLGALGVINLEGVQTRYEDPNAALDRIASVGKDEFVPLMQEIYSQPVQES 117 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 K ++ + + G FG A + + N P Sbjct: 118 LIRK--RIQDVKAQGGIAAVSGTPVAALRFGKAIAEAGADLFFVQATVVSTNH----TGP 171 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G + L M VP+++ G ++ +++G + G + + Sbjct: 172 EGQETL-----DLEALCRDMGVPVVI---GNCVTYEVALQLMRAGAAGVMVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 GIP ++ + +A GG+ G DI Sbjct: 224 ------------SRGVLGVGIPQATAVADCAAARADYEQESGRYVPIVADGGIVTGGDIC 271 Query: 275 KSIILGASLGGLASPF-----------------------------------LKPAMDSSD 299 K I GA + SP L+ + Sbjct: 272 KCIACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGRTGSLEKILRGPA 331 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + ++E+ ++ Sbjct: 332 KLDDGTHNLLGCLKTSMGTLGARTIKEMQQVEVVV 366 >gi|253731970|ref|ZP_04866135.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733416|ref|ZP_04867581.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus TCH130] gi|253724380|gb|EES93109.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728470|gb|EES97199.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus TCH130] Length = 325 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKKHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|315426950|dbj|BAJ48569.1| ferredoxin-dependent glutamate synthase [Candidatus Caldiarchaeum subterraneum] gi|315426967|dbj|BAJ48585.1| ferredoxin-dependent glutamate synthase [Candidatus Caldiarchaeum subterraneum] Length = 453 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 11/145 (7%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K L + + F + G+ GGT S + + +DL + + Sbjct: 295 RIWVKMGPYRDIEDVARLCSQEKVDAFWVDGKEGGTGLSPVTALKDLGLPLLALLGK--- 351 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM-DSSDAVV 302 M ++ASG L +G D++K + GA GL PF+ A + V Sbjct: 352 ------IMKLSRETNMDYVASGRLVDGADVVKVLCFGARAAGLGRPFVVTAYAAGVEGVK 405 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 +E+++ E + +G V L Sbjct: 406 KYLETIKMEVQLLTSAVGKYSVASL 430 Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG 93 F +VD S G S P+ ++SM G+ + +++ ++A A+ + + M VG Sbjct: 99 FTDVDTSCRVGGFMSSLPVAVASM--GSTPVYNKVSLDVAKASAEAGIPMGVG 149 >gi|254521773|ref|ZP_05133828.1| glutamate synthase domain family protein [Stenotrophomonas sp. SKA14] gi|219719364|gb|EED37889.1| glutamate synthase domain family protein [Stenotrophomonas sp. SKA14] Length = 1484 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G I+G GGT S + S R V + G+ Sbjct: 1003 VSVKLVSHAGVGTIAAGVVKAGADLITISGHDGGTGASPVSSIR-----YAGVPWELGVA 1057 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1058 EAHQALLANDLRGRTLLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1117 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + + E+ T L+R Sbjct: 1118 NNCATGVATQDERLRENHFTGQPERVENFFRLLAEEVRGWLSYLGARSLDEIVGRTDLLR 1177 Query: 336 H 336 Sbjct: 1178 Q 1178 >gi|219718465|ref|YP_002474196.1| inosine-5'-monophosphate dehydrogenase [Borrelia garinii PBr] gi|219694142|gb|ACL34672.1| inosine-5'-monophosphate dehydrogenase [Borrelia garinii PBr] Length = 404 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 103/324 (31%), Gaps = 82/324 (25%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM---T-----------GG 67 FDD LI R LP EV + L+ P L S+M T GG Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 68 ---------------------NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 K+ + IN N I + TK+ + ++ + K Sbjct: 68 IGIIHKNMSIEAQKKEIEKVKTYKVEKTININKDINKQTTKILL----EKQHLKESEIYK 123 Query: 107 SFELRQYAPHTVLISN----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 + EL++ P+ N +GA +++ + V H++ L Sbjct: 124 NAELKEDFPNACKDLNSRLRVGAAVSIDIDTLERVEELVKA--------HVDLL------ 169 Query: 163 NGNTNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + S++I L + P L G ++ + G + G+ Sbjct: 170 -VIDSAHGHSTRIIELVKTIKNKYPRLDLIAGNIVTKEAALDLINVGADCLKVGIGPGSI 228 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSII 278 + + G+P ++ C IA GG+R D++K+I Sbjct: 229 CTT------------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIA 276 Query: 279 LGASLGGLASPFLKPAMDSSDAVV 302 GA + + F S+ ++ Sbjct: 277 AGADSVMIGNLFAGAKESPSEEII 300 >gi|24251247|gb|AAN46167.1| unknown protein [Synechococcus elongatus PCC 7942] Length = 387 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 59/203 (29%), Gaps = 58/203 (28%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A +M +P++L G ++ LK+G + G + + Sbjct: 179 LAAFCQSMPIPVIL---GNCVTYDVTLKLLKAGAAGILVGIGPGAACT------------ 223 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGL 286 GIP ++ ++ IA GGL G DI K I GA + Sbjct: 224 SRGVLGVGIPQATAVSDCAAARDDYERETGRYVPIIADGGLITGGDICKCIACGADAVMI 283 Query: 287 ASPFLKPA-----------------------------------MDSSDAVVAAIESLRKE 311 SPF + A + + + Sbjct: 284 GSPFARAAEAPGRGFHWGMATPSPVLPRGTRIKVGTTGTLEQILRGPAQLDDGTHNFLGA 343 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 SM LG + ++E+ +I Sbjct: 344 LKTSMGTLGAQTLKEMQQVYVVI 366 >gi|116334618|ref|YP_796145.1| IMP dehydrogenase/GMP reductase [Lactobacillus brevis ATCC 367] gi|116099965|gb|ABJ65114.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus brevis ATCC 367] Length = 379 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 97/274 (35%), Gaps = 40/274 (14%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI LP +EVD S + KL+ P L +SM T KM + RN Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTQLAPNLKLNVPFLSASMDTVTETKMATTMARNGG 70 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA-VQLNYDFGVQKAHQ 139 + M+ Q M + AI++ P+ + +N V + Sbjct: 71 LGVIHKN--MSADDQAKMVAAVKAIENDA--SQYPNAAVDANNHLLVAAAVGVTSDTFDR 126 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSM 198 A +L A + ++ + + A + K+A + + D L+ V G Sbjct: 127 ASALLNAGADAIIIDTA--------HGHSAGVLRKVAEIRHQLPDATLIAGNVATG---E 175 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 ++G+ + G+ + V G+P ++ A E Sbjct: 176 GTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAIYDAAQVARE 223 Query: 259 A--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 IA GG++ DI+K++ G + S F Sbjct: 224 FGKPIIADGGMKYSGDIVKALAAGGNAVMFGSMF 257 >gi|329116575|ref|ZP_08245292.1| GMP reductase [Streptococcus parauberis NCFD 2020] gi|326906980|gb|EGE53894.1| GMP reductase [Streptococcus parauberis NCFD 2020] Length = 327 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M ++ ++A K Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVKLGKYTFKLPVI-------PANMQTIMDESIAEQFAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D + K F R + + ++G YDF A + Sbjct: 63 NG-----YFYIMHRFDEASRKPFIKRMHEQDLIASISVGVKTYEYDFVTSLKDDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V ES ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHVESPGKTVEIDGESFKE 254 >gi|225683003|gb|EEH21287.1| L-lactate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 412 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 77/272 (28%), Gaps = 60/272 (22%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLIS--SMTGGNNKMIERINRNL 79 N + L R I D S LG KL P+ +S +M + E + Sbjct: 132 NNTIYRSILLRPRVF--IDCTNCDLSTSVLGYKLGLPIYVSPAAMARLAHPAGE---AGI 186 Query: 80 AIAAEKTKV-------AMAVGSQRVMFSDHNAIKSFEL-----RQYAPHTVLISN----L 123 A A K A + V + + + ++L R+ + + N + Sbjct: 187 AAACSKFNAMQLISNNASMTPKEIVANAAPDQVFGWQLYVQTDRKKSEAMLARINKLKSI 246 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD------------- 170 V L D V + + + + + + Sbjct: 247 KFVCLTLDAPVPGKREHDERTQTVTQTSSVTDIVKASGGTPLPSASGIGQQLFAGTDPSL 306 Query: 171 -LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIR--YFDIAGRGGTSWSRIESH 227 S + L+ D+P++LK V + D + G + ++ GG + Sbjct: 307 TWSKTLPWLARHTDLPIVLKGVQ---THEDAYIASLHGPQVKAIILSNHGGRAMDTAP-- 361 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 P +L R YC E Sbjct: 362 ----------------PAVHTLMEIRKYCPEV 377 >gi|77920534|ref|YP_358349.1| glutamate synthase, large subunit [Pelobacter carbinolicus DSM 2380] gi|77546617|gb|ABA90179.1| glutamate synthase (ferredoxin) [Pelobacter carbinolicus DSM 2380] Length = 1513 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + +VD SV G L P++IS+M+ G+ R A AA++ + Sbjct: 843 VDPRDVDASV--GGHDL--PIIISAMSFGSQGETAF--RIYAEAAKRLNIVCMNGEGGEI 896 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA--VHVLGA 146 +G R A F + + +++ +++ + V G Sbjct: 897 PDMLGKYRGNRGQQLASGRFGV---HMDLLNSADILEIKVGQGAKPGEGGHLPGFKVTGK 953 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIE 201 + P +I P+ N + + +A + + + +K Sbjct: 954 IAEARNAAPGVTLISPSNNHDIYSIED-LAQIIEELRTANPRARISIKVPAVAGIGTIAM 1012 Query: 202 LGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G I+G GGT + R + + G+ ++ + Sbjct: 1013 GIAKAGADIITISGYDGGTG-----AARQHAIKFVGMPAEIGVREAHRALAESGLRHKVE 1067 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG+ +G D++K I+LGA+ G Sbjct: 1068 IWADGGMHSGRDVVKMILLGANRVGFG 1094 >gi|227529802|ref|ZP_03959851.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus vaginalis ATCC 49540] gi|227350286|gb|EEJ40577.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus vaginalis ATCC 49540] Length = 324 Score = 59.5 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 96/280 (34%), Gaps = 45/280 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 +DD LI S E D S++F K P++ M IN +LA+ A+ Sbjct: 6 YDDIQLIPNKCIIKSRKEADTSIKFGPKTFKIPVV-------PANMESVINEDLAVWLAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHV 143 + + F +++ + S +G YDF + Sbjct: 59 NDYF------YVMHRFEPEKRAGF-VKRMHERGLFASISVGIKDSEYDF--------IDQ 103 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L A+ HL+P E I + +D + I + + ++ G + + Sbjct: 104 LKAE----HLDP--EYITIDVAHGHSDFVIKMIQYIKKNLPDAFVV--AGNVATPEAVRD 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + ++ + + I Sbjct: 156 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AAIRLCAKAARK-PII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R+ DI KS+ GAS+ + L ++S V+ Sbjct: 205 ADGGIRHNGDIAKSVRFGASMV-MIGSMLAGHLESPGHVI 243 >gi|227514204|ref|ZP_03944253.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum ATCC 14931] gi|227087436|gb|EEI22748.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum ATCC 14931] Length = 380 Score = 59.1 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 94/299 (31%), Gaps = 46/299 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL P + + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQIAKNLKLKVPFISAGM------- 53 Query: 72 IERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAV 126 + + + A + M V S + + +KS L H + N V Sbjct: 54 -DTVTESSMAIAMALQGGMGVIHKNMSIQAQAGEVANVKSVALNSMMSHAAVDDQNRLLV 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A + A + ++ + + A + KIA + Sbjct: 113 AAAVGVTSDTFERAEALFKAGADAIVIDTA--------HGHSAGVLRKIAEIRDHFPNET 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + ++G+ + G+ + V G+P Sbjct: 165 LI--AGNVATGEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 ++ A +E IA GG++ DI+K++ G + + L ++ V Sbjct: 211 TAIYDAASVAHEFGKAIIADGGIKYSGDIVKALAAGGNAV-MLGSMLSGTTEAPGEVYE 268 >gi|297155245|gb|ADI04957.1| GMP reductase [Streptomyces bingchenggensis BCW-1] Length = 386 Score = 59.1 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 91/287 (31%), Gaps = 48/287 (16%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISS----MTGGNNKMIERINRNL 79 FDD L+ + P S + D S E L G L P+ IS+ TG + +N L Sbjct: 12 SFDDVLLVPQRTPLTSRRQADTSSELLPGVVLRTPV-ISANTQWCTGDRMALAMALNGGL 70 Query: 80 AIAAEKTKVAMAVG--SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + V +G R ++ + +G + + Sbjct: 71 GVLHRMQTVEQQLGHLDAVKAHRPEEGSADRATRAADGRLLVGAAVGVSGDWRERAERLV 130 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLS 196 AV VL D H + + +A L +A +PL V Sbjct: 131 EHAVDVLFVDVAHGHSD---------------QVIDAVAKLRAAYPRLPLAAGNVATAAG 175 Query: 197 SMDIELGLKSGIRYFDIA-GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 D ++G + G GG +R + G+P ++ Sbjct: 176 VTD---LAEAGADVVKVGIGPGGVCTTR-------------LVAGTGVPQLTAVMDCAAA 219 Query: 256 CNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 E + IA GG+R DI KS+ GA L A+ +D Sbjct: 220 AAERGVRVIADGGIRQSGDIAKSLAAGAHAV-----MLGSALAGADE 261 >gi|326798372|ref|YP_004316191.1| 2-nitropropane dioxygenase [Sphingobacterium sp. 21] gi|326549136|gb|ADZ77521.1| 2-nitropropane dioxygenase [Sphingobacterium sp. 21] Length = 356 Score = 59.1 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 82/269 (30%), Gaps = 54/269 (20%) Query: 48 VEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI-- 105 E G + +P+L+ M GG + LA + + GS I Sbjct: 8 TELFG--IKYPILLGPMGGGFSTP-----ELLAAVSNAGGL----GSFGAYTLTPQEIRE 56 Query: 106 KSFELRQYAPHTVLISNLGAVQLNY---DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 +R+ NL ++ D+ V+K Q L + P Sbjct: 57 ADKAIRRLTDKPYNF-NLWVSDVDERLTDYSVKKLEQVKQQFKPYFDELSIP------MP 109 Query: 163 NGNTNFADLSSKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIELG 203 + +T+ + + + ++ VG + + L Sbjct: 110 DLSTDIPSKFESQVEVIFEIKPTVFSFIFGAPSSEILRECKRLNIRTVGAATTLDEALLL 169 Query: 204 LKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G+ AG GG R R + +F +L + I Sbjct: 170 EEAGVDALVAAGFEGG--GHRPSFLRSPQESFTGLF---------ALLQQLKSKVKIPII 218 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFL 291 A+GG+ NG I + LGA L + F+ Sbjct: 219 AAGGISNGKGIAAAFNLGADAVQLGTAFV 247 >gi|183983398|ref|YP_001851689.1| dihydroorotate dehydrogenase [Mycobacterium marinum M] gi|183176724|gb|ACC41834.1| dihydroorotate dehydrogenase [Mycobacterium marinum M] Length = 336 Score = 59.1 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 102/305 (33%), Gaps = 56/305 (18%) Query: 45 DPSVEFLGKKLSFPLLISSM--------------TG-GNNKMIERINRNLAIAAEKTKVA 89 D S +LG L PLL S+ G G + L AE+ ++ Sbjct: 2 DLSTTYLGLNLRSPLLASASPLSQTLHGVRALADAGVGAVVLYSLFEEQLRREAEQNELM 61 Query: 90 MAVGSQRVMFSDHNAIKSF--------------ELRQYAPHTVLISNLGAVQLNYDFGVQ 135 A GS+ ++ F L + A +V I +G LN Sbjct: 62 AAQGSESS----PESLSYFPPAVDVASRAQRYLRLIERASASVDIPIIG--SLNASTPGN 115 Query: 136 KAHQAVHVLGADGLFLHLNP--LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 A A + A + LN L N + + + +A VP+ +K Sbjct: 116 WARYAHSMQEAGAAAIELNIYYLPGDTGLNAHAVEQRHLEVLDEVKTATTVPVAVKLSPY 175 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP------- 246 ++ D+ L + AG G D++ + + + + TP Sbjct: 176 FSATADMAHRLDA-------AGADGLVLFNRFLQPDIDPETLSLVRGITLSTPGDTRLGL 228 Query: 247 --LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 +SL R A A+ G+ + D+ K ++ GA + AS L+ + + ++ Sbjct: 229 TWISLLHGR---TRASLAATTGVEHASDVAKYLLAGADVVQTASALLRHGPEYAAVLLRE 285 Query: 305 IESLR 309 ++ Sbjct: 286 LQDWL 290 >gi|15924327|ref|NP_371861.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus Mu50] gi|15926918|ref|NP_374451.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus N315] gi|21282953|ref|NP_646041.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus MW2] gi|49486181|ref|YP_043402.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus MSSA476] gi|148267825|ref|YP_001246768.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus JH9] gi|150393887|ref|YP_001316562.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus JH1] gi|156979657|ref|YP_001441916.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus Mu3] gi|253316477|ref|ZP_04839690.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006125|ref|ZP_05144726.2| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795606|ref|ZP_05644585.1| guanosine monophosphate reductase [Staphylococcus aureus A9781] gi|258413416|ref|ZP_05681692.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A9763] gi|258420475|ref|ZP_05683417.1| guanosine monophosphate reductase [Staphylococcus aureus A9719] gi|258434749|ref|ZP_05688823.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A9299] gi|258447491|ref|ZP_05695635.1| guanosine monophosphate reductase [Staphylococcus aureus A6300] gi|258449332|ref|ZP_05697435.1| guanosine monophosphate reductase [Staphylococcus aureus A6224] gi|258454713|ref|ZP_05702677.1| guanosine monophosphate reductase [Staphylococcus aureus A5937] gi|269202959|ref|YP_003282228.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus ED98] gi|282929152|ref|ZP_06336732.1| guanosine monophosphate reductase [Staphylococcus aureus A10102] gi|295406279|ref|ZP_06816086.1| guanosine monophosphate reductase [Staphylococcus aureus A8819] gi|296275373|ref|ZP_06857880.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus MR1] gi|297208009|ref|ZP_06924440.1| GMP reductase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244508|ref|ZP_06928391.1| guanosine monophosphate reductase [Staphylococcus aureus A8796] gi|300912093|ref|ZP_07129536.1| GMP reductase [Staphylococcus aureus subsp. aureus TCH70] gi|45476788|sp|P60562|GUAC_STAAM RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|45476789|sp|P60563|GUAC_STAAN RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|45476790|sp|P60564|GUAC_STAAW RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|56748975|sp|Q6G9M1|GUAC_STAAS RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|166215322|sp|A7X1Z1|GUAC_STAA1 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|189042455|sp|A6U1F7|GUAC_STAA2 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|189042456|sp|A5ISL9|GUAC_STAA9 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|13701135|dbj|BAB42430.1| SA1172 [Staphylococcus aureus subsp. aureus N315] gi|14247108|dbj|BAB57499.1| GMP reductase [Staphylococcus aureus subsp. aureus Mu50] gi|21204392|dbj|BAB95089.1| MW1224 [Staphylococcus aureus subsp. aureus MW2] gi|49244624|emb|CAG43055.1| putative GMP reductase [Staphylococcus aureus subsp. aureus MSSA476] gi|147740894|gb|ABQ49192.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus JH9] gi|149946339|gb|ABR52275.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus JH1] gi|156721792|dbj|BAF78209.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257789578|gb|EEV27918.1| guanosine monophosphate reductase [Staphylococcus aureus A9781] gi|257839980|gb|EEV64448.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A9763] gi|257843423|gb|EEV67830.1| guanosine monophosphate reductase [Staphylococcus aureus A9719] gi|257849110|gb|EEV73092.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A9299] gi|257853682|gb|EEV76641.1| guanosine monophosphate reductase [Staphylococcus aureus A6300] gi|257857320|gb|EEV80218.1| guanosine monophosphate reductase [Staphylococcus aureus A6224] gi|257863096|gb|EEV85860.1| guanosine monophosphate reductase [Staphylococcus aureus A5937] gi|262075249|gb|ACY11222.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus ED98] gi|282589255|gb|EFB94350.1| guanosine monophosphate reductase [Staphylococcus aureus A10102] gi|285817016|gb|ADC37503.1| GMP reductase [Staphylococcus aureus 04-02981] gi|294968867|gb|EFG44889.1| guanosine monophosphate reductase [Staphylococcus aureus A8819] gi|296887252|gb|EFH26154.1| GMP reductase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178538|gb|EFH37784.1| guanosine monophosphate reductase [Staphylococcus aureus A8796] gi|300886339|gb|EFK81541.1| GMP reductase [Staphylococcus aureus subsp. aureus TCH70] gi|312829734|emb|CBX34576.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131138|gb|EFT87122.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus CGS03] gi|329727124|gb|EGG63580.1| GMP reductase [Staphylococcus aureus subsp. aureus 21172] Length = 325 Score = 59.1 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKNHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|289662246|ref|ZP_06483827.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 1490 Score = 59.1 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A + GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLAYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|289667103|ref|ZP_06488178.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 1319 Score = 59.1 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A + GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLAYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|260662618|ref|ZP_05863513.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum 28-3-CHN] gi|260553309|gb|EEX26252.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum 28-3-CHN] Length = 380 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 95/299 (31%), Gaps = 46/299 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL P + + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQIAKNLKLKVPFISAGM------- 53 Query: 72 IERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAV 126 + + ++ A + M V S + + +KS L H + N V Sbjct: 54 -DTVTKSSMAIAMALQGGMGVIHKNMSIQAQAGEVANVKSVALNSMMSHAAVDDQNRLLV 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A + A + ++ + + A + KIA + Sbjct: 113 AAAVGVTSDTFERAEALFKAGADAIVIDTA--------HGHSAGVLRKIAEIRDHFPNET 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + ++G+ + G+ + V G+P Sbjct: 165 LI--AGNVATGEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 ++ A +E IA GG++ DI+K++ G + + L ++ V Sbjct: 211 TAIYDAASVAHEFGKAIIADGGIKYSGDIVKALAAGGNAV-MLGSMLSGTTEAPGEVYE 268 >gi|118385795|ref|XP_001026023.1| glutamate synthase, putative [Tetrahymena thermophila] gi|89307790|gb|EAS05778.1| glutamate synthase, putative [Tetrahymena thermophila SB210] Length = 2661 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + + +K ++ +K+G IAG GGT ++I S + +W Sbjct: 362 GIQVNVKLASDPDVAITALGAVKAGADRITIAGHSGGTGAAKISSIFNTGMP-----WEW 416 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G+ + A N+ Q +ASGG+ NG D++++I+LGA + + L Sbjct: 417 GVALTHQMLDAYDLRNKIQLVASGGIVNGCDVVEAILLGADKVEIGTSAL 466 >gi|154316949|ref|XP_001557795.1| hypothetical protein BC1G_03892 [Botryotinia fuckeliana B05.10] gi|150845504|gb|EDN20697.1| hypothetical protein BC1G_03892 [Botryotinia fuckeliana B05.10] Length = 356 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 42/266 (15%) Query: 55 LSFPLLISS-MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 + FPL++S+ M G + N +LA + G + D + L + Sbjct: 20 VKFPLIVSAPMLGAATPALAA-NVSLA-----GGIGFLPGGNDGVDLDQRVATTKSLLKA 73 Query: 114 AP------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 A T +G LN+ + A +AV ++L+ P+ + Sbjct: 74 AGREQSQLETFDRLPIGMGFLNWHCKLSVAVEAVKKHKPSAVWLY--------APHATED 125 Query: 168 FADLSSKIALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + ++ + + + + + V L +++ I+ D G G ++ S Sbjct: 126 LKEWAQELRSIGDGKISIWVQVGSVKEALEVVEMARPDVLVIQGSDAGGHG---LAQSAS 182 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 L ++ +LE + IA+GG+ +G + ++ LGA+ + Sbjct: 183 IISLLPEV-----------ADALEDKKSESTTIPLIAAGGIMDGRGVSAALCLGATGAVM 231 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEF 312 + FL S +A + + +KE Sbjct: 232 GTRFLA----SEEAAIP--QGWQKEL 251 >gi|224535469|ref|ZP_03676008.1| hypothetical protein BACCELL_00332 [Bacteroides cellulosilyticus DSM 14838] gi|224522935|gb|EEF92040.1| hypothetical protein BACCELL_00332 [Bacteroides cellulosilyticus DSM 14838] Length = 325 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 101/294 (34%), Gaps = 39/294 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 F G +L P+++SS G E+ N+ A V ++ +++M Sbjct: 4 LKTTFAGLELRNPIIVSSS--GLTDSAEK-NQKFYEAGVGAIVLKSLFEEQIMLEADWLG 60 Query: 106 K--------SFELRQYAPH-----------------TVLISNLGAVQLNYDFGVQKAHQA 140 + + H +I+++ Q G A Q Sbjct: 61 DPNMYPEGSDYLVEYVRQHKLSEYLELIKDTKKVCPIPVIASINCYQDAEWVGF--AQQM 118 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 GAD + +++ LQ +Q N + ++ + + +P+++K + + Sbjct: 119 -EAAGADAIEINILALQTDMQYNYGSFEQRHIDILSHIKKTVRIPIIMKLGDNLTNPIAL 177 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE---MARPYC 256 I+ +G + R + + + + I G +L +A Sbjct: 178 IDQLYANGAAAVVLFNR----FYQPDIDIEKMKQISGNVFSTGADLVKALRWIGIASAAV 233 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 N+ + ASGG+ + I+K+I+ GAS + S F + + + + Sbjct: 234 NKLDYAASGGIHSPEGIVKAILAGASAVEICSAFYQNSYALVGEYIHFLNLWMD 287 >gi|319788590|ref|YP_004148065.1| glutamate synthase (ferredoxin) [Pseudoxanthomonas suwonensis 11-1] gi|317467102|gb|ADV28834.1| Glutamate synthase (ferredoxin) [Pseudoxanthomonas suwonensis 11-1] Length = 1491 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1010 VSVKLVSHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGGP-------WELG 1062 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL---------- 291 S +A + A GGL+ G+D++K+ +LGA G +P + Sbjct: 1063 VAESHQALVANDLRDRAILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1122 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V L +E + LG + + E+ T L Sbjct: 1123 HLNNCATGVATQDERLRMDHFTGLPERVENFFRLLAEEVRGWLSYLGARSLDEIVGRTDL 1182 Query: 334 IRH 336 +R Sbjct: 1183 LRQ 1185 >gi|241894802|ref|ZP_04782098.1| guanosine 5'-monophosphate oxidoreductase [Weissella paramesenteroides ATCC 33313] gi|241872014|gb|EER75765.1| guanosine 5'-monophosphate oxidoreductase [Weissella paramesenteroides ATCC 33313] Length = 328 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 89/280 (31%), Gaps = 44/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ LA Sbjct: 9 YEDIQLIPNKCIINSRSEADTSVKLGNHTFKIPVV-------PANMQTVIDDALA----- 56 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDF--GVQKAHQAVH 142 K+A + + + F +R + + S +G Q YDF ++ A Sbjct: 57 MKLAKSGYFYVMHRFNPETRLDF-VRTFHEEGQIASISVGVKQEEYDFIDQLKAADLVPE 115 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H + + E+ I + + ++ G + + Sbjct: 116 YITIDIAHGHSDSVIEM---------------IKYIKKNLPESFVI--AGNVATPEAVRD 158 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L + + I Sbjct: 159 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRLCAKAAKK-PII 207 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R DI KS+ GA++ + S F A D V Sbjct: 208 ADGGIRYNGDIAKSVRFGATMVMIGSLFAGHAETPGDIVE 247 >gi|238020984|ref|ZP_04601410.1| hypothetical protein GCWU000324_00881 [Kingella oralis ATCC 51147] gi|237867964|gb|EEP68970.1| hypothetical protein GCWU000324_00881 [Kingella oralis ATCC 51147] Length = 297 Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 244 PTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 PT L+ A + E Q I +GG+++GVD+ + I+ GA + + + + V Sbjct: 211 PTALANVFAFRQRLKPEIQIIGTGGVQSGVDVFEHILCGADMVQVGTAL------HQEGV 264 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELY 328 A E L +E M G +++ + Sbjct: 265 -AVFERLTRELRNIMAGKGYRKIDDFK 290 >gi|171779345|ref|ZP_02920309.1| hypothetical protein STRINF_01190 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281962|gb|EDT47393.1| hypothetical protein STRINF_01190 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 327 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 83/279 (29%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V P++ M I+ ++A K Sbjct: 10 YEDIQLIPNKCIIKSRSEADTHVTLGDYTFKLPVV-------PANMQTIIDEDIAEKLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D + K+F R + + ++G YDF A + Sbjct: 63 NG-----YFYIMHRFDEASRKTFVKRMHDQGLIASISVGVKDYEYDFVSSLKDDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + E+ I + + ++ G + + Sbjct: 118 IDIAHGHSDSVIEM---------------IKHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 G+R DI KSI GA++ + S F +S +V Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHL-ESPGKLVEV 247 >gi|319939140|ref|ZP_08013504.1| GMP reductase [Streptococcus anginosus 1_2_62CV] gi|319812190|gb|EFW08456.1| GMP reductase [Streptococcus anginosus 1_2_62CV] Length = 327 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V F P++ M ++ ++A Sbjct: 10 YEDIQLIPNKCIIKSRSEADTTVTFGKHTFKLPVV-------PANMQTILDEDVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 K+A + + D F R + + ++G YDF Q A + Sbjct: 59 -KLAKSGYFYIMHRFDEAGRSPFVKRMHEQGLIASISVGVKDYEYDFVSQLKEDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVIDMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V E ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHIESPGQTVEVDGEQFKE 254 >gi|327270715|ref|XP_003220134.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Anolis carolinensis] Length = 1036 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 109/351 (31%), Gaps = 72/351 (20%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-- 84 D VD SVE G K P ++S T G + + + + I Sbjct: 539 IDLVDISVEMAGLKFPNPFGLASATPTTSSPMIRRAFEAGWGFALTKTFSLDKDIVTNVS 598 Query: 85 -----------KTKVAMAVGSQRVMFSDHNAIKS----FELRQYAPHTVLISNLGAVQLN 129 + S+ A EL+ P +LI+++ Sbjct: 599 PRIIRGTTSGPIYGPGQGSFLNIELISEKTAAYWCKSVTELKTDFPDKILIASIMCSYNK 658 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 659 EDWT--QLSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 710 Query: 180 SAMDVPLLLKEVGCGLSSMDIELG-LKSGIRYFD----IAGRGGTSWSRIESH---RDLE 231 A+ +P K + I + G ++G G I R + Sbjct: 711 QAVQIPFFAKLTPNVTDIVSIARASQEGGADGVTATNTVSGLMGLRADGIPWPAVGRGDK 770 Query: 232 SDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G V + P L ++ +A+GG+ + L+ + GAS+ + Sbjct: 771 TTYGGVSGNAIRPIALRAVSAIAHALPGFPVLATGGIDSAESGLQFLHCGASVLQVC--- 827 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 A+ + D V IE ++L K ++EL + IRHQ Sbjct: 828 --SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPPTIRHQ 871 >gi|27768991|gb|AAH42543.1| Dpyd protein [Mus musculus] Length = 879 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 109/368 (29%), Gaps = 106/368 (28%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAV------- 92 D VD SVE G + P L S+ + MI R A + A+ Sbjct: 382 VDLVDISVEMAGLRFPNPFGLASATPATSTPMIRR--------AFEAGWGFALTKTFSLD 433 Query: 93 -------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLI 120 G+ SF EL+ P +LI Sbjct: 434 KDIVTNVSPRIIRGTTSGPLYGPGQ-SSFLNIELISEKTAAYWCHSVTELKADFPDNILI 492 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFAD 170 +++ D+ + + GAD L L+L+ + + P N Sbjct: 493 ASIMCSYNKSDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICR 550 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTS 220 + A+ VP K + I + G ++G GT Sbjct: 551 W------VRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTP 604 Query: 221 WSRIESHRDLESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDI 273 W + R G+ T + ++ +A+GG+ + Sbjct: 605 WPAVGIGRRTTYG--------GVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESG 656 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----L 329 L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 657 LQFLHSGASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELADWDGQ 706 Query: 330 NTALIRHQ 337 + +I HQ Sbjct: 707 SPPIISHQ 714 >gi|28386052|gb|AAH44730.1| Dpyd protein [Mus musculus] Length = 512 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 109/368 (29%), Gaps = 106/368 (28%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAV------- 92 D VD SVE G + P L S+ + MI R A + A+ Sbjct: 15 VDLVDISVEMAGLRFPNPFGLASATPATSTPMIRR--------AFEAGWGFALTKTFSLD 66 Query: 93 -------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLI 120 G+ SF EL+ P +LI Sbjct: 67 KDIVTNVSPRIIRGTTSGPLYGPGQ-SSFLNIELISEKTAAYWCHSVTELKADFPDNILI 125 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFAD 170 +++ D+ + + GAD L L+L+ + + P N Sbjct: 126 ASIMCSYNKSDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICR 183 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTS 220 + A+ VP K + I + G ++G GT Sbjct: 184 W------VRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTP 237 Query: 221 WSRIESHRDLESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDI 273 W + R G+ T + ++ +A+GG+ + Sbjct: 238 WPAVGIGRRTTYG--------GVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESG 289 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----L 329 L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 290 LQFLHSGASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELADWDGQ 339 Query: 330 NTALIRHQ 337 + +I HQ Sbjct: 340 SPPIISHQ 347 >gi|25140985|ref|NP_740748.1| dihydropyrimidine dehydrogenase [NADP+] [Mus musculus] gi|81878130|sp|Q8CHR6|DPYD_MOUSE RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase gi|24980778|gb|AAH39699.1| Dihydropyrimidine dehydrogenase [Mus musculus] gi|148680406|gb|EDL12353.1| dihydropyrimidine dehydrogenase [Mus musculus] Length = 1025 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 109/368 (29%), Gaps = 106/368 (28%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAV------- 92 D VD SVE G + P L S+ + MI R A + A+ Sbjct: 528 VDLVDISVEMAGLRFPNPFGLASATPATSTPMIRR--------AFEAGWGFALTKTFSLD 579 Query: 93 -------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLI 120 G+ SF EL+ P +LI Sbjct: 580 KDIVTNVSPRIIRGTTSGPLYGPGQ-SSFLNIELISEKTAAYWCHSVTELKADFPDNILI 638 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFAD 170 +++ D+ + + GAD L L+L+ + + P N Sbjct: 639 ASIMCSYNKSDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICR 696 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTS 220 + A+ VP K + I + G ++G GT Sbjct: 697 W------VRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTP 750 Query: 221 WSRIESHRDLESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDI 273 W + R G+ T + ++ +A+GG+ + Sbjct: 751 WPAVGIGRRTTYG--------GVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESG 802 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----L 329 L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 803 LQFLHSGASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELADWDGQ 852 Query: 330 NTALIRHQ 337 + +I HQ Sbjct: 853 SPPIISHQ 860 >gi|157149867|ref|YP_001450446.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus gordonii str. Challis substr. CH1] gi|189042457|sp|A8AXD6|GUAC_STRGC RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|157074661|gb|ABV09344.1| guanosine monophosphate reductase [Streptococcus gordonii str. Challis substr. CH1] Length = 327 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 84/278 (30%), Gaps = 42/278 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V+F P++ + M I+ ++A Sbjct: 10 YEDIQLIPAKCVVKSRAEADTRVKFGNHTFRLPVV-------PSNMQTIIDESVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 ++A + D K F ++Q ++ S +G YDF A + Sbjct: 59 -ELARGGYFYIMHRFDEEGRKPF-VKQMHEKGLIASISVGVKDYEYDFVSSLKEDAPEYI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H + + I + + ++ G + + Sbjct: 117 TIDIAHGHSD---------------SVIKMIQHIKKELPETFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQLS---ALRWCSKVARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 GG+R DI KSI GAS+ + S F + + Sbjct: 209 GGIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGETIE 246 >gi|86606079|ref|YP_474842.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. JA-3-3Ab] gi|86554621|gb|ABC99579.1| IMP dehydrogenase family protein [Synechococcus sp. JA-3-3Ab] Length = 387 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 104/389 (26%), Gaps = 105/389 (26%) Query: 14 CKDPGIDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG----- 66 R D+ L+ R L VD G + P++ S+M G Sbjct: 5 LGRNRQARRAYGLDEIALVPGRRTL---DPSLVDTHFTLGGIQRQIPIIASAMDGVVDVR 61 Query: 67 -----------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKS 107 G + L A K QR+ + I+ Sbjct: 62 MAILLSELGAFGVLNLDGIQTRYADPDEVLDQIASVGKDEFVPLMQRLYSEPVKPDLIQE 121 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV--LGADGLFLHLNPLQEIIQPNGN 165 +RQ + + +G A + + A + +H P G Sbjct: 122 -RIRQIKAGGAIAAASSVPAHAAQYGPLVAEAGGDLFFVQATVVSVHHKV------PEGM 174 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------- 217 +A +M +P++ VG ++ +++G + G G Sbjct: 175 QKL-----DLAAFCRSMPIPVV---VGNCVTYDVALELMQAGAAGVLVGIGPGAACTSRG 226 Query: 218 --GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 G + + D + + G IA GGL G DI K Sbjct: 227 VLGVGVPQATAIADCAAARDQFLTESG--------------TYVPIIADGGLVTGGDICK 272 Query: 276 SIILGASLG-------------------GLASP----------------FLKPAMDSSDA 300 +I GA G+A+P L+ + Sbjct: 273 AIACGADAVMIGSPLARAYEAPGRGFHWGMATPSPILPRGTRIRVGSTGTLEEILRGPAR 332 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + +L SM LG ++E++ Sbjct: 333 LDDGTHNLWGALRTSMATLGAANLKEMHQ 361 >gi|325125088|gb|ADY84418.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 385 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 91/276 (32%), Gaps = 57/276 (20%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI LP +EVD S + KL+ PL+ + M T +M A Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTQLAPNLKLNIPLISAGMDTVTEGRMA-------A 63 Query: 81 IAAEKTKVAMAVGSQRVMFSDHN----------AIKSFELRQYAPHTVLISNLGAVQLNY 130 A+ + + + + A ++ ++ + +G + Sbjct: 64 AMAKMGGLGVVHKNLSIQAQADEVRLAKNTPVTAEDTYAAVDKDGKLLVAAAVGVTSDTF 123 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + +A+ GAD + + + + A + KI + L+ Sbjct: 124 ER-----AKALFEAGADAIVI----------DTAHGHSAGVLRKIKEIRDHFPHNTLIG- 167 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 G ++ ++G+ + G+ + V G+P ++ Sbjct: 168 -GNVATAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAIY 214 Query: 251 MARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 A E IA GG++ D++K++ G + Sbjct: 215 DAADVAREFGKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|298694638|gb|ADI97860.1| GMP reductase [Staphylococcus aureus subsp. aureus ED133] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F + ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKNMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|38344170|emb|CAE03501.2| OSJNBa0053K19.9 [Oryza sativa Japonica Group] Length = 276 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 78/272 (28%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISS--------- 63 + N + F L + +D S+ LG +S P++I+ Sbjct: 30 AEDQWTLRENSEAFSRILFQPVVL--VDVSCIDMSMSVLGYNISMPIMIAPTALHKLAHP 87 Query: 64 ----------------MTGGNNKMI--ERIN--------------------RNLAIAAEK 85 MT + E +N + L AEK Sbjct: 88 EGELATARAAAAAETIMTLSSWSSCSIEEVNLAGPGVRFFQLSIYKDRNLVQQLIQRAEK 147 Query: 86 TK---VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + V + + + + F L Q V L G+ + + Sbjct: 148 AGYKAIVLTVDAPWLGRREADVKNRFTLPQN------------VMLKIFEGLDQGK--ID 193 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 GL + + +F+ I L + +P+L+K + +++ D + Sbjct: 194 ETNGSGLA-------AYVASQIDRSFSW--KDIKWLQTVTSLPVLVKGI---ITAQDTRI 241 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 ++ G ++ GG + + ++ Sbjct: 242 AIEYGAAGIIMSNHGGRQLDYLPATISCLEEL 273 >gi|49483529|ref|YP_040753.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425404|ref|ZP_05601829.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428064|ref|ZP_05604462.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430695|ref|ZP_05607077.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 68-397] gi|257436296|ref|ZP_05612343.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus M876] gi|282903918|ref|ZP_06311806.1| GMP reductase [Staphylococcus aureus subsp. aureus C160] gi|282905683|ref|ZP_06313538.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908651|ref|ZP_06316472.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910920|ref|ZP_06318723.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914127|ref|ZP_06321914.1| GMP reductase [Staphylococcus aureus subsp. aureus M899] gi|282919049|ref|ZP_06326784.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus C427] gi|282924232|ref|ZP_06331906.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus C101] gi|283958102|ref|ZP_06375553.1| GMP reductase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501155|ref|ZP_06667006.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus 58-424] gi|293510116|ref|ZP_06668824.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus M809] gi|293526707|ref|ZP_06671392.1| GMP reductase [Staphylococcus aureus subsp. aureus M1015] gi|295427852|ref|ZP_06820484.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591187|ref|ZP_06949825.1| GMP reductase [Staphylococcus aureus subsp. aureus MN8] gi|56749029|sp|Q6GH69|GUAC_STAAR RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|49241658|emb|CAG40346.1| putative GMP reductase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271861|gb|EEV03999.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274905|gb|EEV06392.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278823|gb|EEV09442.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 68-397] gi|257284578|gb|EEV14698.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus M876] gi|282313619|gb|EFB44012.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus C101] gi|282316859|gb|EFB47233.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus C427] gi|282322195|gb|EFB52519.1| GMP reductase [Staphylococcus aureus subsp. aureus M899] gi|282325525|gb|EFB55834.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327469|gb|EFB57761.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330975|gb|EFB60489.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595536|gb|EFC00500.1| GMP reductase [Staphylococcus aureus subsp. aureus C160] gi|283790251|gb|EFC29068.1| GMP reductase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920779|gb|EFD97842.1| GMP reductase [Staphylococcus aureus subsp. aureus M1015] gi|291096160|gb|EFE26421.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus 58-424] gi|291467060|gb|EFF09578.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus M809] gi|295128210|gb|EFG57844.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576073|gb|EFH94789.1| GMP reductase [Staphylococcus aureus subsp. aureus MN8] gi|312438262|gb|ADQ77333.1| GMP reductase [Staphylococcus aureus subsp. aureus TCH60] gi|315194254|gb|EFU24647.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus CGS00] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|67921820|ref|ZP_00515337.1| IMP dehydrogenase related 2 [Crocosphaera watsonii WH 8501] gi|67856412|gb|EAM51654.1| IMP dehydrogenase related 2 [Crocosphaera watsonii WH 8501] Length = 387 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 109/381 (28%), Gaps = 101/381 (26%) Query: 25 FFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSM--------TGGNNKMIER 74 D+ L+ R L D S G + S P+L S+M G + + Sbjct: 16 GIDEIALVPGNRTL---DPSLADTSWTIGGIERSIPILASAMDSVVDVKMAGLLSDLGAI 72 Query: 75 INRNLAIAAEKT--------KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG-- 124 NL + ++ S+ V K + + I N G Sbjct: 73 GVLNLEGIQTRYEDPKPILDRIVSVGKSEFVGLMQELYAKPIQPELIKQRIIEIKNNGGI 132 Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIA 176 A G K V GAD LF+ HL+P E I P F Sbjct: 133 AAVSLTPAGASKYGNIVAEAGADLLFVQATVVSTAHLSP--ESITPLNLEGF-------- 182 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 M +P++ G ++ +K+G + G + + Sbjct: 183 --CQEMPMPVIF---GNCVTYEVALNLMKAGAAALLVGIGPGAACT------------SR 225 Query: 237 VFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLAS 288 G+P P ++ ++ +A GG+ G DI K I GA + S Sbjct: 226 GVLGVGVPQPTAIADCAAARDDYQRETGRYVPVVADGGIVTGGDICKCIACGADAVMIGS 285 Query: 289 PFLKPAMD------------------------SSDAVVAAI-----------ESLRKEFI 313 P + A + + I +L Sbjct: 286 PIARAAESPGRDYHWGMATPSPVLPRGTRINVGTTGTIQEILTGPAKLDDGTHNLLGALQ 345 Query: 314 VSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 346 TSMGTLGAKDLKEMQEVEVVI 366 >gi|306825114|ref|ZP_07458456.1| GMP reductase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432550|gb|EFM35524.1| GMP reductase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 328 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 100/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D S+ F P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRSEADTSITFGKHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGIIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRKVADLKHVDYVI 316 >gi|283770405|ref|ZP_06343297.1| GMP reductase [Staphylococcus aureus subsp. aureus H19] gi|283460552|gb|EFC07642.1| GMP reductase [Staphylococcus aureus subsp. aureus H19] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|282916599|ref|ZP_06324357.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus D139] gi|282319086|gb|EFB49438.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus D139] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNRCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|57650340|ref|YP_186224.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus COL] gi|66395520|ref|YP_239889.1| ORF012 [Staphylococcus phage 42E] gi|87160590|ref|YP_493932.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195060|ref|YP_499860.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221461|ref|YP_001332283.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus str. Newman] gi|221142091|ref|ZP_03566584.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451736|ref|ZP_05699760.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A5948] gi|262048213|ref|ZP_06021100.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus D30] gi|262051385|ref|ZP_06023608.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus 930918-3] gi|282920605|ref|ZP_06328326.1| guanosine monophosphate reductase [Staphylococcus aureus A9765] gi|284024339|ref|ZP_06378737.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus 132] gi|294848341|ref|ZP_06789088.1| guanosine monophosphate reductase [Staphylococcus aureus A9754] gi|304381087|ref|ZP_07363741.1| GMP reductase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|62286699|sp|Q5HG83|GUAC_STAAC RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|122539632|sp|Q2FYU4|GUAC_STAA8 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|123486048|sp|Q2FH96|GUAC_STAA3 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|172048875|sp|A6QGN9|GUAC_STAAE RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|57284526|gb|AAW36620.1| GMP reductase [Staphylococcus aureus subsp. aureus COL] gi|62636013|gb|AAX91124.1| ORF012 [Staphylococcus phage 42E] gi|87126564|gb|ABD21078.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202618|gb|ABD30428.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374261|dbj|BAF67521.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus str. Newman] gi|257860567|gb|EEV83391.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus A5948] gi|259160760|gb|EEW45781.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus 930918-3] gi|259163779|gb|EEW48334.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus D30] gi|269940836|emb|CBI49218.1| putative GMP reductase [Staphylococcus aureus subsp. aureus TW20] gi|282594267|gb|EFB99254.1| guanosine monophosphate reductase [Staphylococcus aureus A9765] gi|283470552|emb|CAQ49763.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus ST398] gi|294825141|gb|EFG41563.1| guanosine monophosphate reductase [Staphylococcus aureus A9754] gi|302332954|gb|ADL23147.1| GMP reductase [Staphylococcus aureus subsp. aureus JKD6159] gi|302751169|gb|ADL65346.1| GMP reductase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340396|gb|EFM06336.1| GMP reductase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198592|gb|EFU28921.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus CGS01] gi|320140836|gb|EFW32683.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143896|gb|EFW35668.1| guanosine monophosphate reductase [Staphylococcus aureus subsp. aureus MRSA177] gi|329730905|gb|EGG67281.1| GMP reductase [Staphylococcus aureus subsp. aureus 21189] gi|329733613|gb|EGG69941.1| GMP reductase [Staphylococcus aureus subsp. aureus 21193] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|302307661|ref|NP_984386.2| ADR290Wp [Ashbya gossypii ATCC 10895] gi|299789106|gb|AAS52210.2| ADR290Wp [Ashbya gossypii ATCC 10895] Length = 2195 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1138 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1189 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +I+LGA Sbjct: 1190 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAILLGAESFTLATIPLIAMGCVMLRKCHLN 1249 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P L+ + V+ L ++ M LG + V E+ Sbjct: 1250 ACAVGIATQDPVLRAKFQGQPEHVINFFYYLIQDLRKIMAKLGFRTVTEM 1299 >gi|189467062|ref|ZP_03015847.1| hypothetical protein BACINT_03445 [Bacteroides intestinalis DSM 17393] gi|189435326|gb|EDV04311.1| hypothetical protein BACINT_03445 [Bacteroides intestinalis DSM 17393] Length = 325 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 41/313 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 F G +L P+++SS G E+ N+ A V ++ +++M Sbjct: 4 LKTTFAGLELRNPIIVSSS--GLTDSAEK-NQKFYEAGVGAIVLKSLFEEQIMMEADWLG 60 Query: 106 K--------SFELRQYAPH-----------------TVLISNLGAVQLNYDFGVQKAHQA 140 + + H +I+++ Q G A Q Sbjct: 61 DPNMYPEGSDYLVEYVRQHKLSEYLELIKETKKVCPIPVIASINCYQDAEWVGF--AQQM 118 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 GAD + +++ LQ +Q N + ++ + + +P+++K + + Sbjct: 119 -EAAGADAIEINILALQTDVQYNYGSFEQRHIDILSHIKKTVRIPIIMKLGDNLTNPIAL 177 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE---MARPYC 256 I+ +G + R + + + + I G SL +A Sbjct: 178 IDQLYANGAAAVVLFNR----FYQPDIDIEKMKQISGNVFSTGADLVKSLRWIGIASAAV 233 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL--RKEFIV 314 N+ + ASGG+ + I+K+I+ GAS + S F + + + RK Sbjct: 234 NKLDYAASGGIHSPEGIVKAILAGASAVEICSAFYQNSYALVAEYTRFLNLWMDRKGMET 293 Query: 315 SMFLLGTKRVQEL 327 G V +L Sbjct: 294 ISQFKGMLNVSDL 306 >gi|149912445|ref|ZP_01900979.1| glutamate synthase family protein [Roseobacter sp. AzwK-3b] gi|149812851|gb|EDM72677.1| glutamate synthase family protein [Roseobacter sp. AzwK-3b] Length = 493 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 54/165 (32%), Gaps = 18/165 (10%) Query: 142 HVLGADGLFLHLNP-LQEIIQPNGNTN---FADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + A+ + P Q+ + PN + F DL + + P K V + Sbjct: 242 EKINAEIAAIRGIPEGQDSVSPNRHREIGGFGDLLDVVDHIRKVTGKPCGFKTVIGSSDA 301 Query: 198 --MDIELGLKSGIR------YFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 EL L+ G D G GGT + + + I P + L Sbjct: 302 WIEMFELILERGPDSAPDFIAID-GGEGGTGAAPMPLIDLVGMPIREAL-----PRIVDL 355 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + IASG L N D+ +I GA A F+ Sbjct: 356 RDKHGLKDRIRIIASGKLVNPSDVAWAICAGADFVTSARGFMFSL 400 >gi|113476824|ref|YP_722885.1| IMP dehydrogenase subunit [Trichodesmium erythraeum IMS101] gi|110167872|gb|ABG52412.1| IMP dehydrogenase subunit [Trichodesmium erythraeum IMS101] Length = 219 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 60/203 (29%), Gaps = 58/203 (28%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + L M +P++L G ++ +K+G + G + + Sbjct: 11 LVKLCQEMPMPVVL---GNCVTYEVALSLMKAGAAGVLVGIGPGAACT------------ 55 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGL 286 G+P ++ N+ IA GGL G DI KSI GA + Sbjct: 56 SRGVLGVGVPQVTAIADCAAARNDYYQVTGNYVPVIADGGLITGGDICKSIACGADGVMI 115 Query: 287 ASPFLKPAMD------------------------SSDAVVAAI-----------ESLRKE 311 SP + A + + I +L Sbjct: 116 GSPIARAAEAPGAGYHWGMATPSPVLPRGTRIKVGTTGTIKQILSGPAQLDDGTHNLLGA 175 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 176 LKTSMGTLGAKDLKEMQQVEVVI 198 >gi|113954156|ref|YP_730184.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. CC9311] gi|113881507|gb|ABI46465.1| IMP dehydrogenase family protein [Synechococcus sp. CC9311] Length = 387 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 109/395 (27%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I + R D+ L+ PE++ + S G + P++ S+M G Sbjct: 2 DIQLGRSKVVRRAYGIDEIALVPGGRTVDPEVT----NTSWSLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E + L V + ++S Sbjct: 58 VDVGIAVRLSQLGALGVLNLEGIQTRYEDPSEALDRI-TSVGKDEFVPLMQEIYSQPVQE 116 Query: 106 KSFELRQYA--PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQP 162 R A + + G FG +A+ GAD F+ + + I P Sbjct: 117 DLIRKRIEAIKSQGGIAAVSGTPVAALRFG-----KAIAEAGADLFFVQATVVSTDHIGP 171 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G + L M VP+++ G ++ +++G + G + + Sbjct: 172 EGQETL-----NLETLCRDMGVPVVI---GNCVTYEVALQLMRAGAAGVMVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 GIP ++ + +A GG+ G DI Sbjct: 224 ------------SRGVLGVGIPQATAVADCAAARTDYEKESGRYVPIVADGGIVTGGDIC 271 Query: 275 KSIILGASLGGLASPF-----------------------------------LKPAMDSSD 299 K I GA + SP L+ + Sbjct: 272 KCIACGADAVMIGSPIARSEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSLERILRGPA 331 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + ++E+ ++ Sbjct: 332 KLDDGTHNLLGCLKTSMGTLGARTIKEMQQVEVVV 366 >gi|195393362|ref|XP_002055323.1| GJ18851 [Drosophila virilis] gi|194149833|gb|EDW65524.1| GJ18851 [Drosophila virilis] Length = 407 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 106/337 (31%), Gaps = 79/337 (23%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQ--RVM 98 D ++ F G+ +S P+ I++ G +K E + + +GS + Sbjct: 84 DNINLKTSFFGRPISNPIGIAA---GFDKNGEAV-----QGLKDLGFGFIEIGSVTPQAQ 135 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH--QAVHVLG----------- 145 + + + +I+ G ++ V++ +A + Sbjct: 136 IGNPKP----RIFRLHNDRAIINRKGVDSDGHEAVVKRLRHLRATKAIDVVVGVNLERNR 191 Query: 146 -------------------ADGLFLHLNPLQEIIQPNGNTNFADLSSKI----ALLSSAM 182 AD L ++ + L+ + N T +L + A L + Sbjct: 192 TSKTPVMDYMTGVKTFAPWADYLVVNYDHLKGMRSVNNKTKLIELLEGVNKARAQLGDKV 251 Query: 183 DVPLLLK-----EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 +VP+LLK + + + ++ +R + Sbjct: 252 NVPILLKLSPDLTLDEMRDVAAVIKMYACRVDGLIVSNA--------TMYRGNLRVSRLA 303 Query: 238 FQDWGIP--------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 ++ GI T L +M I GG+ +G D + I GAS + + Sbjct: 304 TENGGISGEPLRERSTRLIAQMYELTNGCVPIIGVGGISSGRDAYEKIAAGASYVQIYTA 363 Query: 290 FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 F+ + A ++ ++ + + LG + + Sbjct: 364 FVY---EGP----ALVDRVKADLSAWLTKLGYTNIND 393 >gi|307719447|ref|YP_003874979.1| oxidoreductase [Spirochaeta thermophila DSM 6192] gi|306533172|gb|ADN02706.1| putative oxidoreductase [Spirochaeta thermophila DSM 6192] Length = 326 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 103/306 (33%), Gaps = 60/306 (19%) Query: 46 PSVEFLGKKLSFPLLISSM-------------TGGNNKMIER--INRNLAIAAEKT---- 86 S +LG L PL++ + T G ++ R +A E Sbjct: 3 LSTRYLGLSLKNPLIVGASPLTADVSHLVSCETHGAAAVVLRSLFQEEIAEGVEHLKSLS 62 Query: 87 -KVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 F A++++ L + A + I + ++ + +A + Sbjct: 63 EGFHTEAADYLTHFGTQQALEAYLSLVREAKDRLSIPVIASLNCSSREWWAEAASRIEEA 122 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS----SAMDVPLLLKEVGCGLSSMDI 200 GAD L L++ P N + ++ +I + SA+ VP+ +K S Sbjct: 123 GADALELNVAP----FPSNDAESSQEVEERIYDIVRTARSAVSVPIAVKVGPYFTS---- 174 Query: 201 ELGLKSGIRYFDIAGRGGT-------SWSRIESHRDLES--------DIGIVFQDWGIPT 245 L + + G GG S R L S + + W T Sbjct: 175 ---LGHLLARIEALGAGGVVLFNRFYQVDIAPSTRRLVSGHRLSDPHEFSHTLR-W---T 227 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 L +AS G+ +G+DI K+++ GAS + S L+ + +V + Sbjct: 228 AL-----EAPRRNLDIVASCGIHSGLDIAKAVLAGASAVQVVSAVLRHGFGHIEKMVHEL 282 Query: 306 ESLRKE 311 E+ E Sbjct: 283 EAWLSE 288 >gi|227509070|ref|ZP_03939119.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191457|gb|EEI71524.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 383 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 98/291 (33%), Gaps = 37/291 (12%) Query: 16 DPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIE 73 D + FDD L+ A ++ ++VD SV+ KL+ P L + M T +KM Sbjct: 5 DEKFGKKGFTFDDVLLVPAA-SDVLPNDVDLSVQLADNLKLNVPFLSAGMDTVTESKMA- 62 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTVLISNLGA-VQLNY 130 A+ + + + + K +++ P + N V Sbjct: 63 ------IALAKLGGLGVIHKNLSIESQAGEVAKVKAVKKTTDTPKAAVDKNGSLLVAAAV 116 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 +A +L A + ++ + + A + KIA + L+ Sbjct: 117 GVSSDTFDRASALLEAGTDAIVIDTA--------HGHSAGVLRKIAEIRDHYPDTTLI-- 166 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 G ++ E ++G+ + G+ + V G+P ++ Sbjct: 167 AGNVATAAGTEALFQAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAVY 214 Query: 251 MARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 A + IA GG++ DI+K++ G + L S A D Sbjct: 215 DAAAVARKWGKPIIADGGIQYSGDIVKALAAGGTAVMLGSMLAGTAEAPGD 265 >gi|293605575|ref|ZP_06687955.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292815955|gb|EFF75056.1| L-lactate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 80 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 266 GLRNGVDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRV 324 G+R G D+LK++ LGA + PF A+ V AI+ L+ E +M +LG V Sbjct: 5 GVRRGGDVLKALALGARFVFVGRPFNYAAAVGGQAGVTHAIKLLQAEVDRNMAMLGINSV 64 Query: 325 QELY 328 QE++ Sbjct: 65 QEMH 68 >gi|33865259|ref|NP_896818.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. WH 8102] gi|33632428|emb|CAE07240.1| putative IMP dehydrogenase [Synechococcus sp. WH 8102] Length = 387 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 100/395 (25%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 DIQLGRSKTVRRAYGIDEIALVPGGRTVDPEVT----DTRWTLGGIERDIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTK---VAMAVGSQRVMFSDH 102 G + N L A K V + + Sbjct: 58 VDVDMAVRLSNLGALGVLNLEGVQTRYDDPNEVLDRIAAVGKDEFVPLMQEIYSQPVQES 117 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 K + + + G FG A + + N I P Sbjct: 118 LIRK--RIADIKAKGGIAAVSGTPVAALRFGKAIAEAGADLFFVQATVVSTNH----IGP 171 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G + L M VP+++ G ++ +++G + G + + Sbjct: 172 EGQDTL-----DLEALCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 GIP ++ + +A GG+ G DI Sbjct: 224 ------------SRGVLGVGIPQATAVADCAAARADYEKETGRYVPIVADGGIVTGGDIC 271 Query: 275 KSIILGASLGGLASPFLKP-----------------------------------AMDSSD 299 K I GA + SP + + Sbjct: 272 KCIACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSIERILRGPA 331 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + +Q++ ++ Sbjct: 332 KLDDGTHNLLGCLKTSMGTLGARTIQDMQNVEVVV 366 >gi|241895401|ref|ZP_04782697.1| conserved hypothetical protein [Weissella paramesenteroides ATCC 33313] gi|241871375|gb|EER75126.1| conserved hypothetical protein [Weissella paramesenteroides ATCC 33313] Length = 69 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 272 DILKSIILGASLGGLASPFLK-PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + K++ GA L LA P + A+ + V + L E ++M L GTK + ++ Sbjct: 6 HVFKALAAGADLVALARPIIYGLALGGAQGVTDVVNHLNHELKITMQLAGTKTIADIQHT 65 Query: 331 TAL 333 Sbjct: 66 QLF 68 >gi|254578164|ref|XP_002495068.1| ZYRO0B02596p [Zygosaccharomyces rouxii] gi|238937958|emb|CAR26135.1| ZYRO0B02596p [Zygosaccharomyces rouxii] Length = 2138 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1082 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSIKNAGLPWELGLAE 1133 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G +R G D+ +++LGA Sbjct: 1134 THQTLVLNDLRRNVVVQTDGQIRTGFDVAVAVLLGAEQFTLATVPLIAMGCVMLRKCHLN 1193 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + + V+ L ++ M LG + + E+ Sbjct: 1194 ACAVGIATQDPYLRSKFEGQPEHVINFFYYLIQDLRKIMAKLGFRSIDEM 1243 >gi|312201492|gb|ADQ44792.1| Inosine-5'-monophosphate dehydrogenase (IMPdehydrogenase) (IMPDH) (IMPD) [Borrelia burgdorferi 297] Length = 404 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 104/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ + ++N V + + ++ A L ++ Sbjct: 128 KEDFSNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + +G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLITAGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ CN IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|213863163|ref|ZP_03386418.1| L-lactate dehydrogenase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 65 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 272 DILKSIILGASLGGLASPFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 D+++ I LGA L FL A V + + KE V+M L G K + E+ + Sbjct: 1 DVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQD 60 Query: 331 TAL 333 + + Sbjct: 61 SLV 63 >gi|296110532|ref|YP_003620913.1| inosine-5-monophosphate dehydrogenase [Leuconostoc kimchii IMSNU 11154] gi|295832063|gb|ADG39944.1| inosine-5-monophosphate dehydrogenase [Leuconostoc kimchii IMSNU 11154] Length = 326 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 119/330 (36%), Gaps = 58/330 (17%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNK--MIERINRN 78 +D L+ LP V + L+ P++ + ++ +N Sbjct: 11 GYDQVLLVPGASNVLPHT----VSLATTLAQNFVLNIPVIAEAQGVATDQRVAATALNGG 66 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD-FGVQKA 137 L + AE+ +A +Q + A+ + P+ L + LG V++ + + + A Sbjct: 67 LGVIAEQEDIA----AQVLAVKTAKAVPV--DLEKYPNAFLDA-LGKVRVAAEVWLITDA 119 Query: 138 HQAVHVL---GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 V L GAD +F +L Q+ + N D+ P + VG Sbjct: 120 QARVEKLVSAGADAIFFYL---QDDLDAETNAIVKDVRKA---------YPTVFIAVGTV 167 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI-GIVFQDWGIPTPLSLEMAR 253 + G+ IAG R + SD+ F + + T +++ Sbjct: 168 EDQGIAGALYQDGVDAV-IAG------------RAVNSDLPNNTFYPF-LTTTMAIAEVA 213 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA----AIESLR 309 ++A I+SGG+ D++K+I GA L + LK + +D A +I+ Sbjct: 214 ADFDKA-VISSGGVHYSGDVVKAISAGADAV-LVTDLLKGEVLEADGTFAGGDMSIDDAI 271 Query: 310 KE----FIVSMFLLGTKRVQELYLNTALIR 335 + M G+ V +L L ++ Sbjct: 272 FQADGGLRAGMGYTGSSTVLDLKLTAQFVQ 301 >gi|110835090|ref|YP_693949.1| glutamate synthase subunit alpha [Alcanivorax borkumensis SK2] gi|110648201|emb|CAL17677.1| glutamate synthase, large subunit [Alcanivorax borkumensis SK2] Length = 1487 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 35/183 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ I+G GGT+ S + S R S + Sbjct: 998 DAQVSVKLVSEPGVGTVASGVAKAYADLITISGYDGGTAASPLTSIRYAGSP-----WEL 1052 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFL--------- 291 G+ ++ + GGL+ G+D++K+ ILGA G + P + Sbjct: 1053 GLAEAHQALRGNDLRDKIRLQTDGGLKTGLDVIKAAILGAESFGFGTVPMIVLGCKYLRI 1112 Query: 292 -------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + + + ++ + +E + LLG K + EL T Sbjct: 1113 CHLNNCATGVATQREDLRKEHFIGAPELLINYFNFVAQEVRELLALLGVKSIPELIGRTD 1172 Query: 333 LIR 335 L++ Sbjct: 1173 LLK 1175 >gi|116073099|ref|ZP_01470361.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. RS9916] gi|116068404|gb|EAU74156.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. RS9916] Length = 387 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 105/395 (26%), Gaps = 101/395 (25%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 NI + R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 NIQLGRSKVVRRAYGIDEIALVPGGRTVDPEVT----DTRWTLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTK---VAMAVGSQRVMFSDH 102 G E N L A K V + + Sbjct: 58 VDVGMAVKLSQLGALGVINLEGVQTRYEDPNAVLDRIASVGKDEFVPLMQEIYSQPVQES 117 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 K ++ + + G FG A + + N I P Sbjct: 118 LIRK--RIQDIKAQGGIAAVSGTPVAAMRFGKAIAEAGADLFFVQATVVSTNH----IGP 171 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 G +A L M VP+++ G ++ +++G + G + + Sbjct: 172 EGQETL-----DLAALCRDMGVPVVI---GNCVTYDVALELMRAGAAGVMVGIGPGAACT 223 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 GIP ++ ++ +A GG+ G DI Sbjct: 224 ------------SRGVLGVGIPQATAVADCAAARDDYAKESGRYVPIVADGGIVTGGDIC 271 Query: 275 KSIILGASLGGLASPF-----------------------------------LKPAMDSSD 299 K I GA + SP L+ + Sbjct: 272 KCIACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSLERILRGPA 331 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + ++E+ ++ Sbjct: 332 KLDDGTHNLLGCLKTSMGTLGARTIKEMQQVEVVV 366 >gi|300812022|ref|ZP_07092475.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497005|gb|EFK32074.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325684810|gb|EGD26961.1| inosine-5-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 385 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 94/292 (32%), Gaps = 62/292 (21%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISS---------MTGGNNKMI 72 FDD LI LP +EVD S + KL+ PL IS+ M KM Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTQLAPNLKLNIPL-ISAGMDTVTEGRMAAAMAKMG 69 Query: 73 ER--INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 +++NL+I A+ +V +A + L+ V Sbjct: 70 GLGVVHKNLSIQAQADEVRLA--------KNTPVTAEDTHAAVDKDGKLL-----VAAAV 116 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 +A + A + ++ + + A + KI + L+ Sbjct: 117 GVTSDTFERAEALFEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPHNTLI-- 166 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 G ++ ++G+ + G+ + V G+P ++ Sbjct: 167 AGNVATAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAIY 214 Query: 251 MARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 A E IA GG++ D++K++ G + L + ++ Sbjct: 215 DAADVAREFGKPIIADGGIKYSGDVVKALAAGGNAV-----MLGSMLSGTEE 261 >gi|91084143|ref|XP_970053.1| PREDICTED: similar to glutamate synthase [Tribolium castaneum] gi|270006644|gb|EFA03092.1| hypothetical protein TcasGA2_TC013000 [Tribolium castaneum] Length = 2029 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L + + +K V + K + ++G GGT SW+ I Sbjct: 1004 DLAELIYDLKCANPRARISVKLVSEVGVGVVASGVAKGKAEHIVVSGHDGGTGASSWTGI 1063 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G +R G D++ + +LGA Sbjct: 1064 KN--------AGLPWELGIAETHQVLVLNNLRSRIVLQADGQIRTGFDVVIAALLGADEI 1115 Query: 285 GLAS---------------------------PFLKPAMDSS-DAVVAAIESLRKEFIVSM 316 G ++ P L+ + V+ + L +E M Sbjct: 1116 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPILRKKFTGQPEHVINYMFMLAEEVRQLM 1175 Query: 317 FLLGTKRVQELYLNTALIR 335 LG + QEL T L++ Sbjct: 1176 AKLGVRTYQELVGRTDLLK 1194 >gi|116514463|ref|YP_813369.1| dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093778|gb|ABJ58931.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 309 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 102/312 (32%), Gaps = 40/312 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V + A Sbjct: 63 DLLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAEILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMVEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGI---PTPLSLEMARPY 255 + G + T + +G F +G P + + Sbjct: 180 AQAAEGGGADGLTLIN---TLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVAQVKQ 236 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 I GG+ + D + I+ GAS + +M D + I+ + Sbjct: 237 ATSLPIIGVGGINSPEDAAEFILAGASAVQIG------SMSFYDKLA--IKHVIDGLPAV 288 Query: 316 MFLLGTKRVQEL 327 + +GT V L Sbjct: 289 LAGMGTSDVTSL 300 >gi|257433455|ref|ZP_05609813.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus E1410] gi|257281548|gb|EEV11685.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus subsp. aureus E1410] Length = 325 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E F E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVESRF-ECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|257053748|ref|YP_003131581.1| Malate dehydrogenase [Halorhabdus utahensis DSM 12940] gi|256692511|gb|ACV12848.1| Malate dehydrogenase [Halorhabdus utahensis DSM 12940] Length = 354 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 95/286 (33%), Gaps = 43/286 (15%) Query: 28 DWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 D L+ + P S D+VD S +L PLL + M + + A Sbjct: 12 DVLLVPQRSPVDSRDDVDLSTPLTPDIELERPLLSAPM--------DTVTERETAIA--L 61 Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 A G+ + + E+R +GA D +++ +A+ GA Sbjct: 62 SAAGGFGTIHRFLAIDEQVA--EVRAVVEAG---ERVGAAVGIADGYLERTERALEA-GA 115 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 + + L + + + + + L D L+ VG + + + Sbjct: 116 EAIVLDV----------AHAHLERALAAVETLVDEYDPANLI--VGNVATPEGVRDLYAA 163 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIAS 264 G + G+ + R + G+P +++ + IA Sbjct: 164 GADTVKVGIGPGSHCTT----RRVAGA--------GVPQLTAVDQCADAAEDLDVPVIAD 211 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+++ D +K+++ GA L F A D V + ++ Sbjct: 212 GGIQSSGDAVKALMAGADTVMLGRLFAGTAEAPGDVVEIEGDQYKR 257 >gi|139473774|ref|YP_001128490.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pyogenes str. Manfredo] gi|152032503|sp|A2REI5|GUAC_STRPG RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|134272021|emb|CAM30260.1| GMP reductase [Streptococcus pyogenes str. Manfredo] Length = 327 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S + D SV + P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCIITSRSQADTSVTLGKYQFKLPVI-------PANMQTIIDETIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D ++ K F R + + ++G Y+F + Sbjct: 63 EG-----YFYIMHRFDEDSRKPFIKRMHEQGLIASISVGVKAYEYEFVTSLKEDTPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H N + I + + + ++ G + + Sbjct: 118 IDIAHGHAN---------------SVIDMIKHIKTELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-SIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V E+ ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGETFKE 254 >gi|51891368|ref|YP_074059.1| glutamate synthase large subunit [Symbiobacterium thermophilum IAM 14863] gi|51855057|dbj|BAD39215.1| glutamate synthase large subunit [Symbiobacterium thermophilum IAM 14863] Length = 1552 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 94/265 (35%), Gaps = 35/265 (13%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV-AM---------A 91 EVD +VE G + +P+ IS M+ G+ R A AA + + M Sbjct: 876 AEVDTTVE--GYR--YPITISGMSFGSQGETAF--RAYAEAARRLDIVCMNGEGGEISDM 929 Query: 92 VGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ---LNYDFGVQKAHQAVHVLGADG 148 VG A F + + + Q + A + V A Sbjct: 930 VGRYWRWRGQQVASGRFGVHAEMLNGSRFIEIKIGQGAKPGEGGHLPGAKVSAKVARAR- 988 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELG 203 + P ++I P+ N + + +A L + +++K Sbjct: 989 ---NATPGVDLISPSNNHDIYSIED-LAQLVEELRTVNPLAKIVVKMPVVPGIGTIAVGV 1044 Query: 204 LKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+G + G GGT +R + R + + G+ +A + + Sbjct: 1045 AKAGADVVALCGYDGGTGAARQHALRHAGLPV-----EIGVREAHLALVASGIRDRVEIW 1099 Query: 263 ASGGLRNGVDILKSIILGASLGGLA 287 A G+R+G+D++K ++LGA+ G A Sbjct: 1100 ADSGMRSGLDVVKMLLLGANRVGFA 1124 >gi|297241697|gb|ADI24670.1| inosine monophosphate dehydrogenase [Cryptosporidium hominis] Length = 311 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 67/307 (21%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIA-- 82 F+D L+ E+ EV + L PL+ S+M + + +L Sbjct: 12 FEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAM--------DTVTEHLMAVGM 62 Query: 83 AEKTKVA-----MAVGSQ----------RVMFSDHNAIKSFELRQYAPHTVL-------- 119 A + M + SQ ++ + L + + Sbjct: 63 ARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEENESTPDQNLDKGSADGKDTKSSNNID 122 Query: 120 ------ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS 173 + N G +++ GV + +A ++ A + L+ + + ++ Sbjct: 123 AYSNANLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSA--------HGHSLNIIK 174 Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + + S M++ ++ VG ++ +++G + G+ + Sbjct: 175 TLKEIKSKMNIDVI---VGNVVTEEATRELIENGADGIKVGIGPGSICTT---------- 221 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G+P ++E ++ IA GG+R DI K++ +GAS + L Sbjct: 222 --RIVAGVGVPQITAIEKCSSVASKYGIPIIADGGIRYSGDIGKALAVGASSV-MIGSIL 278 Query: 292 KPAMDSS 298 +S Sbjct: 279 AGTEESP 285 >gi|313884277|ref|ZP_07818042.1| GMP reductase [Eremococcus coleocola ACS-139-V-Col8] gi|312620494|gb|EFR31918.1| GMP reductase [Eremococcus coleocola ACS-139-V-Col8] Length = 324 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 87/284 (30%), Gaps = 44/284 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 F+D LI S E D S++ + P++ M IN LA AA Sbjct: 6 FEDVQLIPNKCIVQSRSECDTSIQLGKRTFKIPVV-------PANMQTVINEELAEWFAA 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + D A K F + + ++G +DF + A Sbjct: 59 NDY-------FYIMHRFDEAARKPFIQKMHEKGLFASISVGIKDNEFDFIREL---AAEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + + + + + + I + + L+ G + + Sbjct: 109 IIPEYITIDV----------AHGHSEYVIDMIHFIKEYLPESFLI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + ++ + + IA Sbjct: 157 ELAGADATKVGVGPGRVCIT-------KLKTGFGTGGWQL---AAIRLCAKAATK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 GG+R+ DI K+I GA + + S L A S I+ Sbjct: 206 DGGIRHNGDIAKAIRFGARMVMIGS--LLAAHVESPGTSREIDG 247 >gi|291244574|ref|XP_002742170.1| PREDICTED: dihydropyrimidine dehydrogenase-like [Saccoglossus kowalevskii] Length = 1025 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 114/355 (32%), Gaps = 80/355 (22%) Query: 41 FDEVDPSVEFLGKKLSFPLLI--------SSM------TGGNNKMIERINRNLAIAAEKT 86 D VD SVE G K S P + S+M G + + + + + I T Sbjct: 527 IDSVDISVEVCGLKFSNPFGLASAPPTTTSAMIRRGFEAGWSFALTKTFSLDKDIV---T 583 Query: 87 KVA--MAVGSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLISNLGA 125 V+ + G+ SF EL+ ++IS++ Sbjct: 584 NVSPRIVRGTTSGHVYGPGQ-GSFLNIELISEKTAAYWCQTVTELKADFKDKIIISSIMC 642 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNFADLSSKIA-LLSSA 181 D+ K + GAD L L+L+ E A+L I + +A Sbjct: 643 SYNKEDWT--KLAKMAEDSGADALELNLSCPHGMGERGMGLACGQDAELVRNICRWVRAA 700 Query: 182 MDVPLLLKEVGCGLSSMD-IELGLKSGIRYFD----IAG-----RGGTSWSRI--ESHRD 229 + +P K + + + ++G GT+W + E Sbjct: 701 VKIPFFAKLTPNVTDIVVIAKAAYEGKADGVTATNTVSGLMGLKSNGTAWPAVGKEKLTT 760 Query: 230 LESDIGIVFQDWGIPTPLSLEMARP---YCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 G + P++L +A+GG+ + L+ + GASL + Sbjct: 761 YGGVSGNAIR------PIALRAVSAIGRALPGFPILATGGIDSADAGLQFLQSGASLLQV 814 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 A+ + D V IE M+L K + EL + +RHQ Sbjct: 815 G-----SAVQNQDFTV--IEDYITGLKTLMYL---KSIDELSDWDGQSPPTLRHQ 859 >gi|326390923|ref|ZP_08212474.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter ethanolicus JW 200] gi|325993071|gb|EGD51512.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter ethanolicus JW 200] Length = 484 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 112/372 (30%), Gaps = 94/372 (25%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD LI A E+ +VD + K L+ PL+ + M T +K+ I R I Sbjct: 12 FDDVLLIP-AKSEVLPKDVDLKTKLTKKITLNIPLMSAGMDTVTESKLAIAIAREGGIGV 70 Query: 84 EKTKVAM---------AVGSQRVMFSDH-NAIKSFELRQYAP--------------HTVL 119 + + S+ + +D +R+ A + L Sbjct: 71 IHKNMPIERQALEVDKVKRSEHGVITDPFYLSPDHTIREAAELMARYRISGVPITVDSKL 130 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------- 171 + + + ++ + K + V L+E Q L Sbjct: 131 VGIITNRDIRFEDDLDKPIREVMTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNV 190 Query: 172 ---SSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRYFDIAGRG 217 I + A++ P K+ VG G MD ++ +++G+ I Sbjct: 191 LKGLITIKDIEKAIEFPNAAKDGKGRLLVAAAVGVGKDMMDRVKALVEAGVDAIVIDTAH 250 Query: 218 GT-----------------------SWSRIESHRDLESDIGIVF---------------Q 239 G + + E+ RDL Sbjct: 251 GHSKGVLEAVSKIKEKYPDLQLIAGNVATAEATRDLIERGADCVKVGIGPGSICTTRVIA 310 Query: 240 DWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 G+P ++ ++ IA GG++ DI+K+I GAS+ L Sbjct: 311 GVGVPQITAIYDCAQEADKYGIPIIADGGIKYSGDIVKAIAAGASVV-----MLGSLFAG 365 Query: 298 SDAVVAAIESLR 309 ++ IE + Sbjct: 366 TEESPGEIEIYQ 377 >gi|300870041|ref|YP_003784912.1| inosine-5-monophosphate dehydrogenase [Brachyspira pilosicoli 95/1000] gi|300687740|gb|ADK30411.1| inosine-5-monophosphate dehydrogenase [Brachyspira pilosicoli 95/1000] Length = 373 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 93/293 (31%), Gaps = 56/293 (19%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 FDD L+ + +I +V + K L PL+ S M + + + A Sbjct: 11 FDDVLLVPQE-SDILPKDVSLERKLTKKITLKTPLISSPM--------DTVTESQMAIAM 61 Query: 85 KTKVAMAVGSQRVMFSDHN----AIKSFELRQYAPHTVL--------ISNLGAVQLNYDF 132 + V + + +KSF+ + + + +G Y+ Sbjct: 62 ALCGGLGVIHKNMPLEQQAKEVAIVKSFKDIENKEKASIDEKGSLIAAAAIGISDDRYER 121 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEV 191 + V+++ D H ++ IA + V ++ Sbjct: 122 TEKLIEAGVNIIVIDTAHGH---------------SKNVLDAIADIKKKYTQVEVIA--- 163 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G + + + +G+ I G+ + + G+P ++E Sbjct: 164 GNIATKDGAKALIDAGVDAIKIGIGAGSICTT------------RIIAGVGVPQLTAIED 211 Query: 252 ARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A + IA GG++ DI+K+ +GA +A ++ V+ Sbjct: 212 ASEIAKQYNVGAIADGGIKYSGDIVKAFAIGADAV-MAGGLFSSTYEAPGEVI 263 >gi|87302140|ref|ZP_01084965.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. WH 5701] gi|87283065|gb|EAQ75021.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. WH 5701] Length = 387 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 64/240 (26%) Query: 139 QAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 QAV GAD F+ + + I P G +A L + +P+++ G ++ Sbjct: 147 QAVAEAGADLFFVQATVVSTDHIGPAGRETL-----DLAALCRDLGIPVVI---GNCVTY 198 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 +++G + G + + GIP ++ + Sbjct: 199 DVALELMRAGAAAVMVGIGPGAACT------------SRGVLGVGIPQATAVADCAAARD 246 Query: 258 E--------AQFIASGGLRNGVDILKSIILGASLGGLASPF------------------- 290 + +A GG+ G DI K I GA + SP Sbjct: 247 DHERETGQYVPIVADGGIVTGGDICKCIACGADAVMIGSPIARASEAPGRGFHWGMATPS 306 Query: 291 ----------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 L+ + + ++L SM LG + ++E+ ++ Sbjct: 307 PVLPRGTRISVGTTGSLEKILRGPAGLDDGTQNLLGALRTSMGTLGARTIKEMQQVDVVV 366 >gi|42526371|ref|NP_971469.1| hypothetical protein TDE0859 [Treponema denticola ATCC 35405] gi|41816483|gb|AAS11350.1| conserved hypothetical protein [Treponema denticola ATCC 35405] Length = 308 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 32/253 (12%) Query: 62 SSMTGGNNKMIERINR----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 + MTG + R +L A+ K +A+++G + I+ LR Sbjct: 60 APMTGAVENVGYEDERQFYFDLIRASVKAGLALSIGDGYPDLKLFSGIE--ALRDVKKKG 117 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIAL 177 + Q+ ++ + ++ ++G D ++ ++ ++ + +A Sbjct: 118 AVFLK-PYPQMKLFERIEASMESAEIIGVDTDAYNIVTMRNLVHLE-----KKSAKDLAA 171 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 L +P +K + +S DIE+ + I+ GG IE+ R + Sbjct: 172 LKKYAKLPFAVKGI---FTSYDIEVVKELKPDIAIISNHGGR----IETDRGSVAAFVNS 224 Query: 238 FQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 L+ + Y E A GGLR D + + LG + P + + Sbjct: 225 H----------LKEIKKYSGE--VWADGGLRKREDFMAASSLGIEEVLIGRPCITALLRD 272 Query: 298 SD-AVVAAIESLR 309 + + I+S+ Sbjct: 273 RENGIKNFIDSIL 285 >gi|331698672|ref|YP_004334911.1| glutamate synthase [Pseudonocardia dioxanivorans CB1190] gi|326953361|gb|AEA27058.1| Glutamate synthase (NADPH) [Pseudonocardia dioxanivorans CB1190] Length = 440 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 242 GIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 GIPT ++ A +E Q I SGG+R G D+ K++ LGA + + L Sbjct: 272 GIPTLAAIPQAVQALDELGLHRKVQLIVSGGIRTGADVAKAMALGADAVAIGTAALIAL 330 >gi|184154557|ref|YP_001842897.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum IFO 3956] gi|183225901|dbj|BAG26417.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus fermentum IFO 3956] Length = 380 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 94/299 (31%), Gaps = 46/299 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL P + + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQIAKNLKLKVPFISAGM------- 53 Query: 72 IERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAV 126 + + + A + M V S + + +KS L H + N V Sbjct: 54 -DTVTESSMAIAMALQGGMGVIHKNMSIQAQAGEVANVKSVALNSMMSHAAVDDQNRLLV 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A + A + ++ + + A + KIA + Sbjct: 113 AAAVGVTSDTFERAEALFKAGADAIVIDTA--------HGHSAGVLRKIAEIRDHFPNET 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + ++G+ + G+ + V G+P Sbjct: 165 LI--AGNVATGEGTRAIFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 ++ A +E IA GG++ DI+K++ G + + L ++ V Sbjct: 211 TAIYDAASVAHEFGKAIIADGGIKYSGDIVKALAAGGNAV-MLGSMLSGTTEAPGEVYE 268 >gi|329925449|ref|ZP_08280341.1| oxidoreductase, 2-nitropropane dioxygenase family protein [Paenibacillus sp. HGF5] gi|328939829|gb|EGG36168.1| oxidoreductase, 2-nitropropane dioxygenase family protein [Paenibacillus sp. HGF5] Length = 366 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 90/289 (31%), Gaps = 57/289 (19%) Query: 43 EVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 + E + + +PL+++ M GG L A +G+ + + Sbjct: 2 NIQLQTELCDRFGIRYPLILAGMAGG------PTTVELVAAVSNAG---GLGTLGAAYME 52 Query: 102 HNA-IKSFELRQYAPHTVLISNLGA-VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 A S + + NL A ++ ++ Q ++ + D H Sbjct: 53 PAAIRHSIQEIRKRTDKPFAVNLFASRASDHQERIEDVQQELNRMRGDLGIPH------- 105 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLL--------------LKE-----VGCGLSSMDI 200 + + D + + VP++ KE V + + Sbjct: 106 -AGSDHVTTPDWFEQQFAVLLEEKVPVISTAFGIPDEPLMRQAKEAKLLVVAMATTVREA 164 Query: 201 ELGLKSGIRYFDI-----AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 L ++G G GT + E + + IG +L Sbjct: 165 ILAEQAGCDAVVAQGSEAGGHRGT-FDISEHP--MGAQIGTF----------ALVPQIVD 211 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA+GG+ +G ++ S++LGA + + FL A + V Sbjct: 212 RVKIPVIAAGGVMDGRGLVASLVLGAQAVQMGTRFLTAAESGAHEVYQQ 260 >gi|114327368|ref|YP_744525.1| glutamate synthase [NADPH] large chain [Granulibacter bethesdensis CGDNIH1] gi|114315542|gb|ABI61602.1| glutamate synthase [NADPH] large chain [Granulibacter bethesdensis CGDNIH1] Length = 1524 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ ++G GGT S S + + Sbjct: 1036 DATVCVKLVARSGIGTIAAGVAKAKADAILVSGHVGGTGASPQTSV-----KYAGLPWEM 1090 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + M + + GG++ G D++ + +LGA G+ + L Sbjct: 1091 GLSETHQVLMLNRLRHRVKLRTDGGIKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQ 1150 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S + V+ + +E + LG + + E+ T L Sbjct: 1151 CHSNTCPVGVCTQDEALREKYDGSPEKVINLFSFIAEEVREILASLGVRTLAEVVGRTDL 1210 Query: 334 IRH 336 + Sbjct: 1211 LHQ 1213 >gi|50309655|ref|XP_454839.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643974|emb|CAG99926.1| KLLA0E19625p [Kluyveromyces lactis] Length = 2141 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1091 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1142 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +I+LGA Sbjct: 1143 THQTLVLNDLRGNVVVQTDGQLRTGFDIAVAILLGAESFTLATVPLIAMGCIMLRKCHLN 1202 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P L+ + V+ L ++ M LG + V E+ Sbjct: 1203 ACAVGIATQDPVLRDKFKGQPEHVINFFYYLIQDLRRIMAKLGFRTVDEM 1252 >gi|262282276|ref|ZP_06060044.1| guanosine monophosphate reductase [Streptococcus sp. 2_1_36FAA] gi|262261567|gb|EEY80265.1| guanosine monophosphate reductase [Streptococcus sp. 2_1_36FAA] Length = 327 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 40/277 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V+F P++ + M I+ ++A Sbjct: 10 YEDIQLIPAKCVVKSRSEADTRVKFGNHTFRLPVV-------PSNMQTIIDESVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D K F R + + ++G YDF A + Sbjct: 59 -ELARGGYFYIMHRFDEEGRKPFVKRMHEKGLIASISVGVKDYEYDFVSSLKGDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQLS---ALRWCSKVARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 G+R DI KSI GAS+ + S F + + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGETIE 246 >gi|315222992|ref|ZP_07864871.1| guanosine monophosphate reductase [Streptococcus anginosus F0211] gi|315187942|gb|EFU21678.1| guanosine monophosphate reductase [Streptococcus anginosus F0211] Length = 327 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 85/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V F P++ M ++ ++A Sbjct: 10 YEDIQLIPNKCILKSRSEADTTVTFGNHTFKLPVV-------PANMQTILDEDVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 K+A + + D + F R + + ++G Y+F Q A + Sbjct: 59 -KLAKSGYFYIMHRFDESDRIPFIKRMHEQGLIASISVGVKDYEYNFVSQLKEDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVIDMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V E ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHIESPGQTVEVDGEQFKE 254 >gi|295402246|ref|ZP_06812203.1| Glutamate synthase [Geobacillus thermoglucosidasius C56-YS93] gi|294975741|gb|EFG51362.1| Glutamate synthase [Geobacillus thermoglucosidasius C56-YS93] Length = 1506 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 108/268 (40%), Gaps = 33/268 (12%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 ++ ++VD SV G+ S P +I+SM+ G+ + R A AAE+ Sbjct: 838 QVPVEKVDISV---GEH-SLPFVIASMSFGSQNEVAF--RAYAEAAERLNMVSLNGEGGE 891 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 + +G A F + +L +G + G + + + Sbjct: 892 IKDMLGKYPRTRGQQIASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIA 951 Query: 145 GADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 A + ++I P+ N + DL+ IA L +A D + +V + I Sbjct: 952 EARNATI----GSDLISPSNNHDIYSIEDLAQMIAELKTANDKAKVAVKVPVVPNIGTIA 1007 Query: 202 L-GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + K+G ++G GGT +RI + + + + + G+ + + N+ Sbjct: 1008 VGIAKAGADIITLSGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGLRNKV 1062 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLA 287 + A GG+++ +D+LK ++LGA+ G Sbjct: 1063 EIWADGGIKSALDVLKVMLLGANRIGFG 1090 >gi|312112264|ref|YP_003990580.1| glutamate synthase (ferredoxin) [Geobacillus sp. Y4.1MC1] gi|311217365|gb|ADP75969.1| Glutamate synthase (ferredoxin) [Geobacillus sp. Y4.1MC1] Length = 1506 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 108/268 (40%), Gaps = 33/268 (12%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 ++ ++VD SV G+ S P +I+SM+ G+ + R A AAE+ Sbjct: 838 QVPVEKVDISV---GEH-SLPFVIASMSFGSQNEVAF--RAYAEAAERLNMVSLNGEGGE 891 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 + +G A F + +L +G + G + + + Sbjct: 892 IKDMLGKYPRTRGQQIASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIA 951 Query: 145 GADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 A + ++I P+ N + DL+ IA L +A D + +V + I Sbjct: 952 EARNATI----GSDLISPSNNHDIYSIEDLAQMIAELKTANDKAKVAVKVPVVPNIGTIA 1007 Query: 202 L-GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + K+G ++G GGT +RI + + + + + G+ + + N+ Sbjct: 1008 VGIAKAGADIITLSGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGLRNKV 1062 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLA 287 + A GG+++ +D+LK ++LGA+ G Sbjct: 1063 EIWADGGIKSALDVLKVMLLGANRIGFG 1090 >gi|219723248|ref|YP_002476691.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 156a] gi|219693047|gb|ACL34254.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 156a] Length = 404 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 103/317 (32%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKVAMA---------------------VGSQRVMFSDHNAIKSFEL 110 I++N++I A++ ++ + + + +A K+ E Sbjct: 68 IGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNDQKPEIFTAKQHLEKSDAYKNAEH 127 Query: 111 RQYAPH-TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ + ++N V + + ++ A L ++ Sbjct: 128 KEDFSNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSA------------H 175 Query: 170 DLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH 227 S++I L + P L G ++ + +G + G+ + Sbjct: 176 GHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLITAGADCLKVGIGPGSICTT---- 231 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 + G+P ++ C IA GG+R D++K+I GA Sbjct: 232 --------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGTKESPSEEII 300 >gi|256848578|ref|ZP_05554019.1| guanosine monophosphate reductase [Lactobacillus coleohominis 101-4-CHN] gi|256714630|gb|EEU29610.1| guanosine monophosphate reductase [Lactobacillus coleohominis 101-4-CHN] Length = 380 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 95/291 (32%), Gaps = 49/291 (16%) Query: 13 VCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGN 68 D + FDD LI LP +EVD SV+ KL+ P + + M Sbjct: 2 ANWDTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSVQLAKNIKLNVPFISAGM---- 53 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR------QYAPHTVLISN 122 + + + A + M V + + A + ++ + N Sbjct: 54 ----DTVTESSMAIAMALQGGMGVVHKNMSIQ-AQAGEVATVKGVSLAGNFEKAATDDQN 108 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 V +A +L A + ++ + + A + KIA + Sbjct: 109 RLLVAAAVGVTSDTFERAEALLKAGADAIVIDTA--------HGHSAGVLRKIAEIRDHF 160 Query: 183 -DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 DV L+ V ++ + +G+ + G+ + V Sbjct: 161 PDVTLIAGNVA---TAEGTKALFDAGVDVVKVGIGPGSICTT------------RVVAGV 205 Query: 242 GIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P ++ A E IA GG++ DI+K++ G + L S F Sbjct: 206 GVPQITAIYDAASVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMF 256 >gi|312373744|gb|EFR21435.1| hypothetical protein AND_17060 [Anopheles darlingi] Length = 2129 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + +K V + K Sbjct: 1060 HSVPGVGLISPPSHHDIYSIEDLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGK 1119 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I+S + + GI + + + A Sbjct: 1120 AEHVVISGHDGGTGASSWTGIKS--------AGLPWELGIAETHQVLVLNDLRSRVVVQA 1171 Query: 264 SGGLRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMD 296 G LR G D++ + +LGA G ++ P L+ Sbjct: 1172 DGQLRTGFDVVVAALLGADEFGFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRAKFA 1231 Query: 297 S-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ L +E M LG +R QEL T L++ Sbjct: 1232 GKPEHVINYFFMLAEEIREIMAGLGLRRFQELIGRTDLLK 1271 >gi|311069709|ref|YP_003974632.1| guanosine 5'-monophosphate oxidoreductase [Bacillus atrophaeus 1942] gi|310870226|gb|ADP33701.1| guanosine 5'-monophosphate oxidoreductase [Bacillus atrophaeus 1942] Length = 326 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 88/286 (30%), Gaps = 40/286 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV G+ P++ M I+ NLAI+ + Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGGRTFKLPVV-------PANMQTIIDENLAISLAE 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 + + F ++ + S +G Y F Q A L Sbjct: 60 NG-----YFYVMHRFEPEKRFDF-IKDMNSRGLFSSISVGVKDEEYQFVQQLAE---ENL 110 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + ++ G + + Sbjct: 111 TPEYMTIDI----------AHGHSKAVIEMIQHIKKHLPNSFVI--AGNIGTPEAVRELE 158 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L ++ IA Sbjct: 159 NAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIAD 207 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + + + ++ Sbjct: 208 GGIRTHGDIAKSIRFGASMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|224476465|ref|YP_002634071.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus carnosus subsp. carnosus TM300] gi|254800134|sp|B9DP67|GUAC_STACT RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|222421072|emb|CAL27886.1| GMP reductase [Staphylococcus carnosus subsp. carnosus TM300] Length = 325 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 81/278 (29%), Gaps = 40/278 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D SV+F K+ P++ M +N LA AE Sbjct: 6 YEDVQLIPNKCIVKSRSECDTSVQFGPKRFKLPVV-------PANMQTVMNEKLAEWFAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D F + ++G YDF + A + + Sbjct: 59 NDYF------YIMHRFDEEGRIPFIKKMQDKGLFASISVGVKDKEYDFVRELAEEGLKPE 112 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 H + Q + + I + S + ++ G + + Sbjct: 113 YITIDIAHGHSEQ-------------VINMIRQIKSYLPETFVI--AGNVGTPEGVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W L+ IA Sbjct: 158 NAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAAINHCSKAARKPMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 GG+R DI KSI GAS+ + S F + V Sbjct: 207 GGIRTHGDIAKSIRFGASMVMVGSLFAAHEESPGETVE 244 >gi|124022622|ref|YP_001016929.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9303] gi|123962908|gb|ABM77664.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9303] Length = 388 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 108/396 (27%), Gaps = 101/396 (25%) Query: 10 INIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSM-- 64 +NI + R D+ L+ PEI+ D G + P++ S+M Sbjct: 2 VNIQLGRTKVVRRAYGIDETALVPGGRTVDPEIT----DTCWNLAGIEREIPIIASAMDS 57 Query: 65 --------TGGNNKMIERINRN------------LAIAAEKTKVAMAVGSQRVMFSDHNA 104 + IN L + K A V + ++S Sbjct: 58 VVNVDMAVALSRLGALGVINLEGVQTRYKDPNPVLDRISAIGKDAF-VPLMQEIYSKPVQ 116 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH--QAVHVLGADGLFLHLNPLQ-EIIQ 161 I N G + V + + GAD F+ + E I Sbjct: 117 ED-----LIYQRIKEIKNQGGIAAVSGTPVAAMRFSKTIAEAGADLFFVQATVVSTEHIG 171 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P G + L M VP+++ G ++ +++G + G + Sbjct: 172 PEGQQTL-----DLEALCQGMGVPVVM---GNCVTYEVALQLMRAGAAGVMVGIGPGAAC 223 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDI 273 + GIP ++ + +A GG+ G DI Sbjct: 224 T------------SRGVLGVGIPQATAVADCAAAREDYERESGRYVPIVADGGIITGGDI 271 Query: 274 LKSIILGASLGGLASPF-----------------------------------LKPAMDSS 298 K I GA + SP L+ + Sbjct: 272 CKCIACGADAVMIGSPIARAVEAPGRGFHWGMATPSPVLPRGTRIKVGSTGSLERILRGP 331 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG + ++E+ +I Sbjct: 332 ALLDDGTHNLLGALKTSMGTLGARTIKEMQQVEVVI 367 >gi|187735242|ref|YP_001877354.1| inosine-5'-monophosphate dehydrogenase [Akkermansia muciniphila ATCC BAA-835] gi|187425294|gb|ACD04573.1| inosine-5'-monophosphate dehydrogenase [Akkermansia muciniphila ATCC BAA-835] Length = 483 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 26/178 (14%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G +A ++ A L ++ + + ++ L D P++ Sbjct: 223 AVGVGPDYLDRAKALISAGADALFIDAA--------TGHTTRVMDVVSNLRKLTDRPIVA 274 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G +++ +K+G++ + G+ + V G+P + Sbjct: 275 ---GNVVTAEGAADLIKAGVQAIKVGVGPGSICTT------------RVISGVGMPQFTA 319 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 ++ IA GG+R DI+K++ GA L + L +S VV Sbjct: 320 IQEVASVARPAGVTVIADGGIRYSGDIVKALAAGADLV-MLGGLLAGTEESPGKVVHY 376 >gi|82750932|ref|YP_416673.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus aureus RF122] gi|123549109|sp|Q2YXS9|GUAC_STAAB RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|82656463|emb|CAI80884.1| GMP reductase [Staphylococcus aureus RF122] Length = 325 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKIPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKTHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|108760738|ref|YP_632097.1| glutamate synthase large subunit [Myxococcus xanthus DK 1622] gi|108464618|gb|ABF89803.1| glutamate synthase, large subunit [Myxococcus xanthus DK 1622] Length = 1521 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 34/182 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+G I+G GGT S + S + + G+ Sbjct: 1023 RVSVKLVSEVGVGTIAAGVAKAGASCVVISGYEGGTGASPLSSI-----QHAGLPWELGL 1077 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--------- 294 + + + + A GG+R D+L + +LGA G+A+ L Sbjct: 1078 AETQQVLVHNGLRSRIRVQADGGMRTARDVLVATLLGAEEFGMATASLVAVGCIMLRKCH 1137 Query: 295 -------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + VV + ++ M LG + +QEL L+R Sbjct: 1138 LNTCSAGIATQDAGLRERFQGKPEDVVNFFLLIAEDLRQRMAALGARSLQELVGRVDLLR 1197 Query: 336 HQ 337 + Sbjct: 1198 QR 1199 >gi|315923857|ref|ZP_07920085.1| glutamate synthase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] gi|315622697|gb|EFV02650.1| glutamate synthase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] Length = 387 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 55/272 (20%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 +L P+L S+M+ G+ ++LA AA G + EL Y Sbjct: 132 ELELPILFSAMSYGSISENAH--KSLARAATALGTCYNTG---------EGGLNKELYPY 180 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHV------------------LGADGLFLHLNP 155 P+T++ + + + G KA AV + + A + P Sbjct: 181 GPNTIV--QVASGRFGVHEGYLKAGAAVEIKMGQGAKPGIGGHLPGKKIRAKVFETRMIP 238 Query: 156 -LQEIIQPNGNTNFADLSSKIALLSSAMD------VPLLLKEVGCGLSSMDIELGLKSGI 208 + I P + + + + L ++ P+++K + +SG Sbjct: 239 EGSDAISPAPHHDIYSIED-LRQLVFSLKEATDYQKPVIVKIAAVHNVAAIASGIARSGA 297 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFI 262 I G G + + RD + GIP L+L N+ + Sbjct: 298 DVIAIDGFRGGTGAAPTRIRD----------NVGIPIELALAAVDQRLRDEKIRNDVSIV 347 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 G +R+ D++K+I L A + + L Sbjct: 348 VGGSIRSAADVVKAIALRADACYIGTAALLAL 379 >gi|18103920|emb|CAC83303.1| putative (s)-2-hydroxy-acid oxidase [Pinus pinaster] Length = 79 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 268 RNGVDILKSIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 R G D+ K++ LGAS + P + A + V ++ LR EF ++M L G V+E Sbjct: 1 RRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRNVLKMLRDEFELTMALAGCCSVKE 60 Query: 327 LYLN 330 + N Sbjct: 61 INRN 64 >gi|229542728|ref|ZP_04431788.1| guanosine monophosphate reductase [Bacillus coagulans 36D1] gi|229327148|gb|EEN92823.1| guanosine monophosphate reductase [Bacillus coagulans 36D1] Length = 327 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 88/277 (31%), Gaps = 38/277 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SVE G+K P++ M I+ +A+ Sbjct: 7 YEDIQLIPEKCIVNSRSECDTSVELGGRKFRLPVV-------PANMQTIIDEKIAV---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + SF + L +++ ++ + A L Sbjct: 56 -YLAENGYFYIMHRFQPEKRLSF--VKEMKERGLYASISTGVKPEEYAFIE-ELAARNLE 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + I + + ++ G + + Sbjct: 112 PEYITIDI--------AHGHSNA--VIDMIHHIKKHLPETFVI--AGNVGTPEAVRELEH 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 G+R DI KS+ GA++ + S F + + Sbjct: 209 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETIE 245 >gi|313123026|ref|YP_004033285.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279589|gb|ADQ60308.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 385 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 94/292 (32%), Gaps = 62/292 (21%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISS---------MTGGNNKMI 72 FDD LI LP +EVD S + KL+ PL IS+ M KM Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTQLAPNLKLNIPL-ISAGMDTVTEGRMAAAMAKMG 69 Query: 73 ER--INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 +++NL+I A+ +V +A + L+ V Sbjct: 70 GLGVVHKNLSIQAQADEVRLA--------KNTPVTAEDTHAAVDKDGKLL-----VAAAV 116 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 +A + A + ++ + + A + KI + L+ Sbjct: 117 GVTSDTFERAEVLFEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPHNTLI-- 166 Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 G ++ ++G+ + G+ + V G+P ++ Sbjct: 167 AGNVATAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAIY 214 Query: 251 MARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 A E IA GG++ D++K++ G + L + ++ Sbjct: 215 DAADVAREFGKPIIADGGIKYSGDVVKALAAGGNAV-----MLGSMLSGTEE 261 >gi|239618433|ref|YP_002941755.1| dihydroorotate dehydrogenase family protein [Kosmotoga olearia TBF 19.5.1] gi|239507264|gb|ACR80751.1| dihydroorotate dehydrogenase family protein [Kosmotoga olearia TBF 19.5.1] Length = 361 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 42/307 (13%) Query: 45 DPSVEFLGKKLSFPLL--ISSMTGGNNKMIERINRNLA---------IAAEKTKVAMAVG 93 D + + G +L+ P++ +TG + KM+ + L AAE + + G Sbjct: 2 DLTTKIAGLQLANPVMPASGPLTGDDQKMLALTDFGLGAMVTKTISTKAAEVPRPCIIAG 61 Query: 94 SQRVMFSDHNAIKSFE----LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 + + ++ P S+L + ++ + V+ V + Sbjct: 62 KN--YIMNTELWTEYPPEKWKGEFIPKFREKSSLPLI-VSLGYTVEDLEVLVPMFDDLAD 118 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK-SGI 208 L+ P + I + D P+ LK + ++ +G Sbjct: 119 AFELSTHYVADDPELMKH------LIRTVKKHTDKPVFLKFDPSVPEPEVMAKAVEEAGG 172 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG-----IPTPLSLEMARPYCN--EAQF 261 G +R+L+S +G + P++L M + + Sbjct: 173 DGIVAINSLG---PGYPLYRELKSSPLGSTHGFGWISGPVIKPIALAMVKRVASSCNLPI 229 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 I GG+ + D++ I+ GAS L L A+ ++ I + + LG Sbjct: 230 IGVGGISSADDVIDFIMAGASAVQL----LSGALLYGKSIYKKI---IADLPKKLEALGY 282 Query: 322 KRVQELY 328 + E+ Sbjct: 283 NSINEIK 289 >gi|163791162|ref|ZP_02185580.1| guanosine 5'-monophosphate oxidoreductase [Carnobacterium sp. AT7] gi|159873557|gb|EDP67643.1| guanosine 5'-monophosphate oxidoreductase [Carnobacterium sp. AT7] Length = 324 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 86/266 (32%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D ++EF G++ + P++ M I+ LAI + Sbjct: 6 YEDVQLIPNKSIVRSRSECDTTIEFGGRRFNLPVV-------PANMQTVIDETLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F + N + + GV+ A + Sbjct: 59 NNFFYVM-----HRFDEEDRIPF---------IQRMNEKGLYSSISVGVKDAEY--DFIE 102 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLS-SKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 N + E I + +DL + I + + L+ G + + Sbjct: 103 TLAKE---NLVPEYITIDIAHGHSDLVINMIHHIKKFLPGTFLI--AGNVGTPEAVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + + IA Sbjct: 158 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AALRLCAKAARK-PLIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KSI GAS+ + S F Sbjct: 207 GGVRDHGDIAKSIRFGASMVMMGSLF 232 >gi|89097137|ref|ZP_01170027.1| hypothetical protein B14911_16200 [Bacillus sp. NRRL B-14911] gi|89087960|gb|EAR67071.1| hypothetical protein B14911_16200 [Bacillus sp. NRRL B-14911] Length = 537 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 19/215 (8%) Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA--VQLNYDFGVQKAHQAVHVLG 145 + M +G S++ I + A ++L ++ H + Sbjct: 229 IMMQIGPGLFGVRTPGGEFSWD---EFEKKSKIEQVKAFEIKLAQGAKIRGGHIEGEKVN 285 Query: 146 ADGLFLHL-NPLQEIIQPNGNTNFADLSSKIALLSSAMDV---PLLLKEVGCGLS--SMD 199 + + L P Q I PN F + + D P+ +K V L Sbjct: 286 EEIAQIRLVEPWQTINSPNRFYEFNNYDELFQFVEKMRDKGGKPVGIKIVVGDLDSLEEM 345 Query: 200 IELGLK--SGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 ++ + G + + G GGT + E + IG P + + Sbjct: 346 AQVMKETGMGPDFITVDGGEGGTGATYQELADAVGLPIGSAL-----PAVDEMLVKYKVR 400 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + IASG L + ++ +GA L +A F+ Sbjct: 401 DRVKLIASGKLITPDKVAIALAMGADLVNIARGFM 435 >gi|325923241|ref|ZP_08184916.1| glutamate synthase (NADPH) large subunit [Xanthomonas gardneri ATCC 19865] gi|325546265|gb|EGD17444.1| glutamate synthase (NADPH) large subunit [Xanthomonas gardneri ATCC 19865] Length = 1490 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A + GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRANYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|256844333|ref|ZP_05549819.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus 125-2-CHN] gi|256613411|gb|EEU18614.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus 125-2-CHN] Length = 381 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 45/280 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S KL+ PL IS+ G + + Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTTLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + A N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQAGEVANVKSVVVPTSAAKAATDDQNHLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPL 186 +A +L A + ++ + + A + KI + L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEICDHFPEATL 165 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 + V G +G+ + G+ + V G+P Sbjct: 166 IAGNVATG---DATRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 211 TAIYDAATAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|156843686|ref|XP_001644909.1| hypothetical protein Kpol_530p21 [Vanderwaltozyma polyspora DSM 70294] gi|156115562|gb|EDO17051.1| hypothetical protein Kpol_530p21 [Vanderwaltozyma polyspora DSM 70294] Length = 2139 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1082 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1133 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1134 THQTLVLNDLRRNVIVQTDGQLRTGFDIAVAVLLGAESFTLATIPLIAMGCVMLRRCHLN 1193 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1194 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRKIMAKLGYRTIDEM 1243 >gi|270292629|ref|ZP_06198840.1| GMP reductase [Streptococcus sp. M143] gi|315613277|ref|ZP_07888186.1| GMP reductase [Streptococcus sanguinis ATCC 49296] gi|270278608|gb|EFA24454.1| GMP reductase [Streptococcus sp. M143] gi|315314512|gb|EFU62555.1| GMP reductase [Streptococcus sanguinis ATCC 49296] Length = 328 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRKVADLKHVDYVI 316 >gi|296127009|ref|YP_003634261.1| GMP reductase [Brachyspira murdochii DSM 12563] gi|296018825|gb|ADG72062.1| GMP reductase [Brachyspira murdochii DSM 12563] Length = 373 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 95/286 (33%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 FDD L+ + +I +V + K L+ PL+ S M + + + A Sbjct: 11 FDDVLLVPQE-SDILPKDVSLRRKLTNKITLNTPLISSPM--------DTVTESKMAIAM 61 Query: 85 KTKVAMAVGSQRVMFSDH----NAIKSFELRQYAPHTVLISNLG-AVQLNYDFGVQKAHQ 139 A+ V + + +K+F+ + L ++ + + Sbjct: 62 ALCGALGVIHKNMSLEQQAKEVEMVKNFKDIEDKEKASLSADGSLIAAAAIGISEDRYER 121 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSM 198 ++ A + ++ + + ++ + I + V ++ G ++ Sbjct: 122 IEKLIEAKVDLIVIDTA--------HGHSKNVLTAIKEIKDKYKQVEVIA---GNIATAD 170 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 + + +G+ I G+ + + G+P ++ A + Sbjct: 171 GAKALIDAGVDAIKIGIGAGSICTT------------RIIAGVGVPQLTAIYDASEVAKK 218 Query: 259 AQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 IA GG++ DI+K+ +GA +A ++ V+ Sbjct: 219 NNVGSIADGGIKYSGDIVKAFAIGADAV-MAGGLFSSTYEAPGDVI 263 >gi|319947026|ref|ZP_08021260.1| GMP reductase [Streptococcus australis ATCC 700641] gi|319747074|gb|EFV99333.1| GMP reductase [Streptococcus australis ATCC 700641] Length = 350 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 101/347 (29%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V+F P++ M ++ ++A Sbjct: 33 YEDIQLIPNKCIIKSRAEADTTVQFGKHTFKLPVV-------PANMQTILDEDVAE---- 81 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D + F R + + ++G YDF Q A + Sbjct: 82 -QLAKGGYFYIMHRFDEDGRIPFIKRMHDQGLIASISVGVKDYEYDFVTQLKDDAPEYIT 140 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + ++ G + + Sbjct: 141 IDIAHGHSD---------------SVIQMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 183 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 184 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIADG 232 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 233 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGESFKEYYGSASEYQKGAYKN 292 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ S+ G ++V +L +I Sbjct: 293 VEGKKILLPAKGHLQDTLTEMEQDLQSSISYAGGRKVADLKHVDYVI 339 >gi|325915668|ref|ZP_08177973.1| glutamate synthase (NADPH) large subunit [Xanthomonas vesicatoria ATCC 35937] gi|325538085|gb|EGD09776.1| glutamate synthase (NADPH) large subunit [Xanthomonas vesicatoria ATCC 35937] Length = 1490 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A + GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|148543355|ref|YP_001270725.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri DSM 20016] gi|184152765|ref|YP_001841106.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri JCM 1112] gi|227364429|ref|ZP_03848519.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri MM2-3] gi|227543823|ref|ZP_03973872.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri CF48-3A] gi|300908891|ref|ZP_07126354.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri SD2112] gi|325683628|ref|ZP_08163144.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri MM4-1A] gi|148530389|gb|ABQ82388.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri DSM 20016] gi|183224109|dbj|BAG24626.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri JCM 1112] gi|227070522|gb|EEI08855.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri MM2-3] gi|227186200|gb|EEI66271.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus reuteri CF48-3A] gi|300894298|gb|EFK87656.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri SD2112] gi|324977978|gb|EGC14929.1| inosine-5-monophosphate dehydrogenase [Lactobacillus reuteri MM4-1A] Length = 380 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 102/301 (33%), Gaps = 50/301 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EVD S + KL PL+ + M T G Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQLADNLKLHIPLISAGMDTVTEGP 60 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGA 125 + + L + + M++ +Q ++ +KS + A + N L A Sbjct: 61 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVVVPAGATKAAVDDNNRLLVA 113 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DV 184 + + +A+ GAD + + + + A + KIA + D Sbjct: 114 AAVGVTSDTFERAEALLKAGADAIVI----------DTAHGHSAGVLRKIAEIREHFPDA 163 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 L+ V G +G+ + G+ + V G+P Sbjct: 164 TLIAGNVATG---EATRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVP 208 Query: 245 TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 ++ A E IA GG++ D++K++ G + + L ++ V Sbjct: 209 QITAIYDAASVAREYNKPIIADGGIKYSGDVVKALAAGGNAV-MLGSMLSGTTEAPGEVF 267 Query: 303 A 303 Sbjct: 268 E 268 >gi|92112748|ref|YP_572676.1| glutamate synthase subunit alpha [Chromohalobacter salexigens DSM 3043] gi|91795838|gb|ABE57977.1| glutamate synthase (NADPH) large subunit [Chromohalobacter salexigens DSM 3043] Length = 1483 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 35/183 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ ++G GGT+ S + S + S + Sbjct: 994 DAQVSVKLVSEPGIGTIATGVAKAYADLITVSGYDGGTAASPLTSIKHAGSP-----WEL 1048 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL--------- 291 G+P ++ + GGL+ G+D++K+ ILGA G +P + Sbjct: 1049 GLPEVHQALRINSLRDKIRLQTDGGLKTGLDVVKAAILGAESFGFGTAPMVALGCKYLRI 1108 Query: 292 -------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + D V + +E M LLG +++ +L T Sbjct: 1109 CHLNNCATGVATQHQHLRDEHFRGTVDMVKHYFRFIAEEVRELMALLGVRQLTDLIGRTD 1168 Query: 333 LIR 335 L+ Sbjct: 1169 LLE 1171 >gi|227511976|ref|ZP_03942025.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus buchneri ATCC 11577] gi|227084784|gb|EEI20096.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus buchneri ATCC 11577] Length = 383 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 95/281 (33%), Gaps = 37/281 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD L+ A ++ + VD SV+ KL+ P L + M T +KM A Sbjct: 15 FDDVLLVPAA-SDVLPNNVDLSVQLADNLKLNVPFLSAGMDTVTESKMA-------IALA 66 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTVLISNLGA-VQLNYDFGVQKAHQA 140 + + + + + K +++ P + N V +A Sbjct: 67 KLGGLGVIHKNLSIESQAGEVAKVKAVKKTTDTPKAAVDKNGSLLVAAAVGVSSDTFDRA 126 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 +L A + ++ + + A + KIA + L+ G ++ Sbjct: 127 SALLEAGTDAIVIDTA--------HGHSAGVLRKIAEIRDHYPDTTLI--AGNVATAAGT 176 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-- 258 E ++G+ + G+ + V G+P ++ A + Sbjct: 177 EALFQAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAVYDAAAVARKWG 224 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 IA GG++ DI+K++ G + L S A D Sbjct: 225 KPIIADGGIQYSGDIVKALAAGGTAVMLGSMLAGTAEAPGD 265 >gi|241742406|ref|XP_002412388.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|241794608|ref|XP_002414500.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215505714|gb|EEC15208.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215508711|gb|EEC18165.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 77 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 E+ R + GG+R G D++K++ LGA + P L + ++ Sbjct: 6 EIVRAVRGRVEVYVDGGVRRGTDVVKALSLGAKAVFVGRPALWGLAYNVRQTQNYFQTFL 65 Query: 310 KEFIVSMF 317 + + +F Sbjct: 66 DKVSIYVF 73 >gi|325126167|gb|ADY85497.1| Dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 309 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 102/312 (32%), Gaps = 40/312 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V + A Sbjct: 63 DLLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAEILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMVEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGI---PTPLSLEMARPY 255 + G + T + +G F +G P + + Sbjct: 180 AQAAEGGGADGLTLIN---TLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVAQVKQ 236 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 I GG+ + D + I+ GAS + +M D + I+ + Sbjct: 237 ATSLPIIGVGGINSPEDAAEFILAGASAVQIG------SMAFYDKLA--IKHVIDGLPAV 288 Query: 316 MFLLGTKRVQEL 327 + +GT V L Sbjct: 289 LAGMGTSDVTSL 300 >gi|332666025|ref|YP_004448813.1| 2-nitropropane dioxygenase NPD [Haliscomenobacter hydrossis DSM 1100] gi|332334839|gb|AEE51940.1| 2-nitropropane dioxygenase NPD [Haliscomenobacter hydrossis DSM 1100] Length = 356 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 87/269 (32%), Gaps = 44/269 (16%) Query: 48 VEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---SQRVMFSDHNA 104 + LG + +P++ GG + + + + + + G S + + N Sbjct: 8 TKLLG--IDYPIVQGPFGGGLSSV-----QLTSTVSNAGGLGSFGGQPFSSQEIIETCNE 60 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 I+ F + + L N +L FG ++ + + L L N Sbjct: 61 IRKFTNKAFN--INLWVNDRDARLAT-FGDEEYKKLTALFKPYFDELGLPIP--ARPTNL 115 Query: 165 NTNFADLSSKIALLSSAM-----DVP----------LLLKEVGCGLSSMDIELGLKSGIR 209 T F + I A+ +P L +K VG + + +G+ Sbjct: 116 GTKFEEQIEAIYEAKPAVFSFVYGIPSSSILENCSRLGIKTVGAATTVDEAIALENAGVD 175 Query: 210 YFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 G GG R+ R E + F SL + IA+GG+ Sbjct: 176 AIVATGFEAGG---HRVSFLRSAEDSLTGTF---------SLIPQVADHVKIPIIAAGGI 223 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMD 296 + I ++ LGA + + FL A Sbjct: 224 ADSRGIKAALALGADAVQMGTAFLATAQS 252 >gi|21229510|ref|NP_635427.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766384|ref|YP_241146.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. campestris str. 8004] gi|188989433|ref|YP_001901443.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. campestris str. B100] gi|21110973|gb|AAM39351.1| glutamate synthase, alpha subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571716|gb|AAY47126.1| glutamate synthase, alpha subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167731193|emb|CAP49365.1| glutamate synthase (NADPH), alpha subunit [Xanthomonas campestris pv. campestris] Length = 1490 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A + GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRANYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|1370295|emb|CAA61505.1| glutamate synthase (NADPH) [Saccharomyces cerevisiae] Length = 2144 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1082 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1133 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1134 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1193 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1194 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1243 >gi|323309881|gb|EGA63083.1| Glt1p [Saccharomyces cerevisiae FostersO] Length = 2053 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|190405168|gb|EDV08435.1| glutamate synthase [Saccharomyces cerevisiae RM11-1a] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|323464542|gb|ADX76695.1| guanosine monophosphate reductase [Staphylococcus pseudintermedius ED99] Length = 325 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 90/289 (31%), Gaps = 46/289 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E+D SV+F K+ P++ M +N +LA A+ Sbjct: 6 YEDIQLIPNKSIVKSRSEIDTSVQFGPKRFKLPVV-------PANMQTVMNESLAEWFAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D A F +++ L +++ +F A +A L Sbjct: 59 NDYF------YIMHRFDEAARLPF-VKKMQSKG-LYASISVGVKPGEFEFIDALKA-ENL 109 Query: 145 GADGLFL---HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + + H + Q I I + + ++ G + + Sbjct: 110 TPEYITIDIAHGHSDQVIGM-------------IQYIKEHLPKAFVI--AGNVGTPEGVR 154 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + G + G W L+ Sbjct: 155 ELENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAAVNHCSKAARKPI 203 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 IA GG+R DI KS+ GAS+ + S F + V + ++ Sbjct: 204 IADGGIRTHGDIAKSVRFGASMVMIGSLFAAHEESPGETVEIEGKKYKE 252 >gi|323355891|gb|EGA87703.1| Glt1p [Saccharomyces cerevisiae VL3] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|323338401|gb|EGA79626.1| Glt1p [Saccharomyces cerevisiae Vin13] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|256273590|gb|EEU08523.1| Glt1p [Saccharomyces cerevisiae JAY291] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|6320030|ref|NP_010110.1| Glt1p [Saccharomyces cerevisiae S288c] gi|114152810|sp|Q12680|GLT1_YEAST RecName: Full=Glutamate synthase [NADH]; AltName: Full=NADH-GOGAT; Flags: Precursor gi|1061267|emb|CAA91574.1| putative protein [Saccharomyces cerevisiae] gi|1431274|emb|CAA98745.1| GLT1 [Saccharomyces cerevisiae] gi|285810866|tpg|DAA11690.1| TPA: Glt1p [Saccharomyces cerevisiae S288c] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|291296184|ref|YP_003507582.1| glutamate synthase (ferredoxin) [Meiothermus ruber DSM 1279] gi|290471143|gb|ADD28562.1| Glutamate synthase (ferredoxin) [Meiothermus ruber DSM 1279] Length = 1498 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 90/268 (33%), Gaps = 33/268 (12%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 ++ +EVD SV G S P +I++M+ G+ E R AA+K Sbjct: 829 GVNPEEVDLSV--GGH--SLPFVITAMSFGSQ--GEASFRAYIEAAKKLNMVCINGEGGE 882 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + +G A F Y + +G + G + + Sbjct: 883 IPDMLGKYTHWRGQQVASGRFGAHAYMLNSAGFIEIKIGQGAKPGEGGHLPGKKVTAKVA 942 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDI 200 A + P ++I P+ N + + +A L + + +K Sbjct: 943 AARNAV---PGVDLISPSNNHDLYSIED-LAQLIEELKTVNPKAKVSVKVPVIPGIGTIA 998 Query: 201 ELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 K+G ++G GGT + R + + G+ + + Sbjct: 999 VGIAKAGADVIALSGFEGGTG-----AARWHALKYAGLPVEIGVRRAHRALVRAGMRDRV 1053 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLA 287 + A GGL+ D L+ ++LGA G+A Sbjct: 1054 EIWADGGLKTAYDTLRMVLLGADRVGMA 1081 Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 62/200 (31%), Gaps = 26/200 (13%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG L G + V L L L I Q +G + + + + Sbjct: 523 LGRRPLPDGRGAGHVEELVVPL---LLEETAPSLGAIAQKHGTLTYEEALRRFQHAVLPL 579 Query: 183 DVPLLLKEVGCGLSS--MDIELGLKSGIRYFDIAGRG----GTSWSRIESHRDLESDIGI 236 + + + GL ++ G ++ RG G + + + Sbjct: 580 QFSV-EEGIAAGLKRLQEAAIEAVRGGAELLVLSDRGAFEGGVWLDVYLALAAVGRALEE 638 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL----K 292 + GI SL + SGG+RN D+ + LGA P+L Sbjct: 639 TRDEEGI----SLRRRTSV-----LVHSGGVRNLHDLAVCLGLGADAVA---PWLMQHKA 686 Query: 293 PAMDSSDAVVAAIESLRKEF 312 A + + +E L+K Sbjct: 687 QASKGTLGLQNLLEGLKKGL 706 >gi|151941833|gb|EDN60189.1| glutamate synthase (NADH) [Saccharomyces cerevisiae YJM789] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|259145074|emb|CAY78338.1| Glt1p [Saccharomyces cerevisiae EC1118] Length = 2145 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1083 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 1134 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1135 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 1194 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1195 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 1244 >gi|58040282|ref|YP_192246.1| glutamate synthase [NADPH] large chain [Gluconobacter oxydans 621H] gi|58002696|gb|AAW61590.1| Glutamate synthase [NADPH] large chain [Gluconobacter oxydans 621H] Length = 1506 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + +S + + G+ Sbjct: 1023 VTVKLVARTGIGTIAAGVAKAKADAILISGHSGGTGASPQSSI----HYAGLPWEMGLSE 1078 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM---------- 295 + M + GG++ G D++ + +LGA G+ + L Sbjct: 1079 AHQVLMLNRLRHRLVLRTDGGIKTGRDVVMAAMLGAEEFGIGTAALVAMGCIMVRQCHSN 1138 Query: 296 ------------------DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 S + V+ + ++ + LG + ++E+ T ++R Sbjct: 1139 TCPVGVCVQDEKLREKFGGSPEKVINLFTLIAEDIRHILADLGVRSLEEVIGRTDMLRQ 1197 >gi|194467515|ref|ZP_03073502.1| Malate dehydrogenase [Lactobacillus reuteri 100-23] gi|194454551|gb|EDX43448.1| Malate dehydrogenase [Lactobacillus reuteri 100-23] Length = 380 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 102/301 (33%), Gaps = 50/301 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EVD S + KL PL+ + M T G Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQLADNLKLHIPLISAGMDTVTEGP 60 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGA 125 + + L + + M++ +Q ++ +KS + A + N L A Sbjct: 61 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVVVPAGATKAAVDDNNRLLVA 113 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DV 184 + + +A+ GAD + + + + A + KIA + D Sbjct: 114 AAVGVTSDTFERAEALLKAGADAIVI----------DTAHGHSAGVLRKIAEIREHFPDA 163 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 L+ V G +G+ + G+ + V G+P Sbjct: 164 TLIAGNVATG---EATRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVP 208 Query: 245 TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 ++ A E IA GG++ D++K++ G + + L ++ V Sbjct: 209 QITAIYDAASVAREYNKPIIADGGIKYSGDVVKALAAGGNAV-MLGSMLSGTTEAPGEVF 267 Query: 303 A 303 Sbjct: 268 E 268 >gi|87307841|ref|ZP_01089984.1| Inosine-5-monophosphate dehydrogenase [Blastopirellula marina DSM 3645] gi|87289455|gb|EAQ81346.1| Inosine-5-monophosphate dehydrogenase [Blastopirellula marina DSM 3645] Length = 491 Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 65/184 (35%), Gaps = 26/184 (14%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG +++ GV + ++ N + ++ + + + ++ + + Sbjct: 215 LGRLRVGAAVGVMDFERVQSLID--------NSVDVLVVDSAHGHSKNVIETVREIKKNW 266 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + ++ G ++ +++G+ + G+ + V G Sbjct: 267 PIDVVA---GNIATAEGCADLIEAGVDAVKVGIGPGSICTT------------RVVSGVG 311 Query: 243 IPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +P ++ A + IA GG+R DI K+I GAS+ + F +S Sbjct: 312 VPQVTAIRDAAQVAAKHGIPIIADGGVRFSGDICKAIASGASVVMIGGLF-AGLHESPGD 370 Query: 301 VVAA 304 V+ Sbjct: 371 VILY 374 >gi|320528046|ref|ZP_08029212.1| guanosine monophosphate reductase [Solobacterium moorei F0204] gi|320131672|gb|EFW24236.1| guanosine monophosphate reductase [Solobacterium moorei F0204] Length = 343 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 84/280 (30%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D + +F P++ M I+ +LAI Sbjct: 24 YEDIQLIPNKCIVNSRSECDTTTQFGKHHFKLPVV-------PANMQTIIDESLAI---- 72 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV--HV 143 K+A + + F + ++G + Y V AH + Sbjct: 73 -KLAENGYFYIMHRFTPESRLPFVQMMNEKGLISSISVGVKENEYHLIVDLAHHHLVPDY 131 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + D H N + + I + + ++ G + + Sbjct: 132 ITIDIAHGHSNA---------------VINMIKHIKKYLPDTFVI--AGNVGTPEGVREL 174 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 175 ENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AALRWCAKAARK-PIIA 223 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R+ DI KSI GA++ + S F + V+ Sbjct: 224 DGGIRSNGDIAKSIRFGANMVMIGSLFAGHIESPGNTVMQ 263 >gi|194211086|ref|XP_001490668.2| PREDICTED: dihydropyrimidine dehydrogenase [Equus caballus] Length = 1080 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 113/359 (31%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-- 84 D VD SVE G K P ++S T G + + + + I Sbjct: 583 IDLVDISVEMAGLKFVNPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTNVS 642 Query: 85 ---KTKV---AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 + M Q + ++ EL+ P ++I+++ Sbjct: 643 PRIIRGITSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 702 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ ++ A QA GAD L L+L+ + + P N + Sbjct: 703 NDW-MELAKQA-EASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 754 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ VP K + I + G ++G GT W + + Sbjct: 755 QAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMELKADGTPWPAVGIGKR 814 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 815 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 866 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K ++EL + A + HQ Sbjct: 867 VLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSHQ 915 >gi|126666712|ref|ZP_01737689.1| glutamate synthase, large subunit [Marinobacter sp. ELB17] gi|126628757|gb|EAZ99377.1| glutamate synthase, large subunit [Marinobacter sp. ELB17] Length = 1482 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 65/181 (35%), Gaps = 36/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+ ++G GGT+ S + S R S + + Sbjct: 996 VSVKLVSEPGVGTIAAGVVKAYADLITVSGYDGGTAASPLTSIRYAGSPWELGLAE---- 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLK--PA 294 T +L A + GG++ G+D++K+ ILGA + L FL+ Sbjct: 1052 TQQALR-ANDLRGRVRLQTDGGIKTGLDVVKAAILGAESFAFGTTPMVALGCKFLRICHL 1110 Query: 295 MDSSDAVVAAIESLR-------------------KEFIVSMFLLGTKRVQELY-LNTALI 334 + + V E LR +E M LG + +QEL L+ Sbjct: 1111 NNCATGVATQNEQLRDEHFKGTVGMAMNFFRFVAEETREWMARLGVRSLQELVGRTDLLV 1170 Query: 335 R 335 R Sbjct: 1171 R 1171 >gi|224586550|ref|YP_002640450.1| inosine-5'-monophosphate dehydrogenase [Borrelia spielmanii A14S] gi|224497612|gb|ACN53234.1| inosine-5'-monophosphate dehydrogenase [Borrelia spielmanii A14S] Length = 403 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 103/316 (32%), Gaps = 67/316 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI R LP EV + L+ P L S+M T ++M Sbjct: 12 FDDVSLIPRKSSVLP----SEVCLKTQLTKNISLNIPFLSSAMDTVTESRMAIAIAKEGG 67 Query: 73 -ERINRNLAIAAEKTKV-------AMAVG-------------SQRVMFSDHNAIKSFELR 111 I++N++I A+K ++ A S + + K+ E + Sbjct: 68 IGIIHKNMSIEAQKKEIEKVKTYKAQKTNNNNKYINEQATKMSAKEDLEEPKIHKNAEHK 127 Query: 112 QYAPHTVLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + P+ N V + + ++ A H++ L + Sbjct: 128 EDFPNACKDLNSRLRVGAAVSIDIDTIERVEELVKA-----HVDLL-------VIDSAHG 175 Query: 171 LSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 S++I L + P L G ++ + +G + G+ + Sbjct: 176 HSTRIIELVKTIKNKYPNLDLIAGNIVTKEAALDLINAGADCLKVGIGPGSICTT----- 230 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ C IA GG+R D++K+I GA + Sbjct: 231 -------RIVAGVGVPQITAICDVYEICKNTNICIIADGGIRFSGDVVKAIAAGADSVMI 283 Query: 287 ASPFLKPAMDSSDAVV 302 + F S+ ++ Sbjct: 284 GNLFAGVKESPSEEII 299 >gi|322387939|ref|ZP_08061546.1| GMP reductase [Streptococcus infantis ATCC 700779] gi|321141212|gb|EFX36710.1| GMP reductase [Streptococcus infantis ATCC 700779] Length = 327 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V P++ + M ++ ++A Sbjct: 10 YEDIQLIPNKCVLQSRAEADTQVTLGKYTFKLPVV-------PSNMQTILDEDVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFVKRMHEKGLIASISVGVKDYEYDFVSQLKEDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGKQFKEYYGSASEYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ S+ G ++V +L +I Sbjct: 270 VEGKKILLPAKGHLQDTLTEMEQDLQSSISYAGGRKVADLRHVDYVI 316 >gi|258444675|ref|ZP_05693004.1| guanosine monophosphate reductase [Staphylococcus aureus A8115] gi|282892827|ref|ZP_06301062.1| guanosine monophosphate reductase [Staphylococcus aureus A8117] gi|257850168|gb|EEV74121.1| guanosine monophosphate reductase [Staphylococcus aureus A8115] gi|282764824|gb|EFC04949.1| guanosine monophosphate reductase [Staphylococcus aureus A8117] Length = 325 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEEARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKNHIPDSFVI--AGNVGTLEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|261408560|ref|YP_003244801.1| 2-nitropropane dioxygenase NPD [Paenibacillus sp. Y412MC10] gi|261285023|gb|ACX66994.1| 2-nitropropane dioxygenase NPD [Paenibacillus sp. Y412MC10] Length = 366 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 89/286 (31%), Gaps = 51/286 (17%) Query: 43 EVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 + E + + +PL+++ M GG L A +G+ + + Sbjct: 2 NIQLQTELCDRFGIRYPLILAGMAGG------PTTVELVAAVSNAG---GLGTLGAAYME 52 Query: 102 HNA-IKSFELRQYAPHTVLISNLGA-VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 A S + + NL A + ++ Q ++ + D H Sbjct: 53 PAAIRDSIQEIRKRTDQPFAVNLFASRASDRQERIEDVQQELNRMRGDLGIPH------- 105 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLL--------------LKE-----VGCGLSSMDI 200 + + D + + VP++ KE V + + Sbjct: 106 -AGSDHVTTPDWFEQQFAVLLEEKVPVISTAFGIPDGPLMRQAKEAKLLVVAMATTVREA 164 Query: 201 ELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 L ++G G GG + S + + IG +L + Sbjct: 165 ILAEQAGCDAVVAQGSEAGGHRGTFDISDHPMGAQIGTF----------ALVPQIVDRVK 214 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 IA+GG+ +G ++ S++LGA + + FL A + V Sbjct: 215 IPVIAAGGVMDGRGLVASLVLGAQAVQMGTRFLTAAESGAHEVYQQ 260 >gi|329115316|ref|ZP_08244070.1| Dihydroorotate Dehydrogenase [Acetobacter pomorum DM001] gi|326695295|gb|EGE46982.1| Dihydroorotate Dehydrogenase [Acetobacter pomorum DM001] Length = 348 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 100/323 (30%), Gaps = 51/323 (15%) Query: 45 DPSVEFLGKKLSFPLLISSM--------------TGGNNKMIERINRNLAIAAEKTKVAM 90 D +LG +L+ P++ S+ G + ++ + A E +A Sbjct: 16 DIRTHYLGLELAHPVVASASPLTADLEGILRVADAGASAIVMASVFEEDIRAQE---LAE 72 Query: 91 AVGSQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGV----------QKAHQ 139 A + S A F + +P ++ L + + Sbjct: 73 AALWETGENSHPEAAGYFPVMPHASPLDGRLAVLRSASERAGVPIIASLNGCTPAGWLRF 132 Query: 140 AVHVLGADGLFLHLNPLQEIIQPN--GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS- 196 A + A + LN P+ G + + + + VP+ +K S Sbjct: 133 AKDMEQAGASAIELNFWHIPTNPDETGAQVEERCIQILRDVRAQVKVPVSVKLSPFFSSL 192 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF-----QDWGIPTPLSLEM 251 ++ ++G + R L + F + +P ++ + Sbjct: 193 GNMVKRLSENGADGIVLFNS-----FYEPGLRSLTDSAEVDFIPSSAYELRLPLMWAVLL 247 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR-- 309 + + SGG+ +G+D+ K ++ GA + + S L+ ++ + Sbjct: 248 SEHCQADLAI--SGGVHSGMDVAKCLLAGADVAMVTSVLLQQGPSYISTLLEELREWMSV 305 Query: 310 ------KEFIVSMFLLGTKRVQE 326 KEF M GT E Sbjct: 306 QKLGSVKEFKGRMAARGTATQAE 328 >gi|207347097|gb|EDZ73395.1| YDL171Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1159 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 97 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----AARWTSVKYAGLPWELGLAE 148 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 149 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCVMLRRCHLN 208 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 209 SCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMAKLGFRTIDEM 258 >gi|228475331|ref|ZP_04060054.1| GMP reductase [Staphylococcus hominis SK119] gi|314936508|ref|ZP_07843855.1| GMP reductase [Staphylococcus hominis subsp. hominis C80] gi|228270643|gb|EEK12062.1| GMP reductase [Staphylococcus hominis SK119] gi|313655127|gb|EFS18872.1| GMP reductase [Staphylococcus hominis subsp. hominis C80] Length = 325 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 90/288 (31%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V+F K P++ M +N +LA AE Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVQFGPKTFKLPVV-------PANMQTVMNESLAEWFAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH-QAVHV 143 + F P + N G + + GV++ + + Sbjct: 59 NDYFYIM--------------HRFNEVGRIPFIKKMQNKG-LFASISVGVKETEFEFIEK 103 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + HL P E I + A+ + + I + + ++ G + + Sbjct: 104 LKTE----HLIP--EYITIDIAHGHANSVINMIKHIKKHIPQSFVI--AGNVGTPEGVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W L+ I Sbjct: 156 LENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R DI KSI GA++ + S F + V + ++ Sbjct: 205 ADGGIRTHGDIAKSIRFGATMVMIGSLFAAHEESPGETVELDGKRYKE 252 >gi|260778709|ref|ZP_05887601.1| ferredoxin-dependent glutamate synthase [Vibrio coralliilyticus ATCC BAA-450] gi|260604873|gb|EEX31168.1| ferredoxin-dependent glutamate synthase [Vibrio coralliilyticus ATCC BAA-450] Length = 493 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 92/301 (30%), Gaps = 52/301 (17%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGGNNKMIERINRNLAIA 82 ++ A P + D V P+ +G+ P IS M+ G R L+ Sbjct: 110 IMFMNCAFPTLEEDAVSPAAVTIGEGCRTPYTTSSIFNISGMSFGALSKPAV--RALSKG 167 Query: 83 AEKTK--------------------VAMAVGSQRVMFSDHN-AIKSFELRQYAPHTVLIS 121 A+ + +G+ + D + +LR+ A H Sbjct: 168 AKIAGCWMNTGEGGLSSYHLEGDCDIVFQIGTAKYGVRDEEGHLSDDKLRELAAH----D 223 Query: 122 NLGAVQLNYDFGVQKAHQAV---HVLGADGLFLHLNP-LQEIIQPNGNTNFAD---LSSK 174 N+ ++ G + + + A+ + P + I PNG+ + + L Sbjct: 224 NVRMFEIKISQGAKPGKGGMLPGRKVTAEIAQIRGIPQGHDSISPNGHKDIRNVGDLLDM 283 Query: 175 IALLSSAMDVPLLLKEVGCGLSS------MDIELGLKSGIRYFDI-AGRGGTSWSRIESH 227 I + P+ K V G S + I + GGT + Sbjct: 284 IQRIREVTGKPVGFKSVIGSQVWFKDLLDEIERRGHDSAPDFITIDSADGGTGAAPQPLM 343 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + P ++L R + +ASG L + +I LGA A Sbjct: 344 DYVGLPLKESL-----PLVVNLLSERGLIPRIKVVASGKLITPSKVAWAIALGADFVVSA 398 Query: 288 S 288 Sbjct: 399 R 399 >gi|227524962|ref|ZP_03955011.1| IMP dehydrogenase/GMP reductase [Lactobacillus hilgardii ATCC 8290] gi|227087874|gb|EEI23186.1| IMP dehydrogenase/GMP reductase [Lactobacillus hilgardii ATCC 8290] Length = 383 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 95/281 (33%), Gaps = 37/281 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD L+ A ++ + VD SV+ KL+ P L + M T +KM A Sbjct: 15 FDDVLLVPAA-SDVLPNNVDLSVQLADNLKLNVPFLSAGMDTVTESKMA-------IALA 66 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQ--YAPHTVLISNLGA-VQLNYDFGVQKAHQA 140 + + + + + K +++ P + N V +A Sbjct: 67 KLGGLGVIHKNLSIESQAGEVAKVKAVKKTTDTPKAAVDKNGSLLVAAAVGVSSDTFDRA 126 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 +L A + ++ + + A + KIA + L+ G ++ Sbjct: 127 SALLEAGTDAIVIDTA--------HGHSAGVLRKIAEIRDRYPDTTLI--AGNVATAAGT 176 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE-- 258 E ++G+ + G+ + V G+P ++ A + Sbjct: 177 EALFQAGVDVVKVGIGPGSICTT------------RVVAGVGVPQLTAVYDAAAVARKWG 224 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 IA GG++ DI+K++ G + L S A D Sbjct: 225 KPIIADGGIQYSGDIVKALAAGGTAVMLGSMLAGTAEAPGD 265 >gi|225870511|ref|YP_002746458.1| GMP reductase [Streptococcus equi subsp. equi 4047] gi|254800135|sp|C0MAM1|GUAC_STRE4 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|225699915|emb|CAW93839.1| GMP reductase [Streptococcus equi subsp. equi 4047] Length = 327 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVRLGNYTFKLPVI-------PANMQTIIDETIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D K F R + + ++G YDF A + Sbjct: 59 -QLARDGYFYIMHRFDEEGRKPFIQRMHEQQLIASISVGVKDYEYDFVSSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVIKMIKHIKAELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + ++ + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V +S ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHIESPGKMVEIDGQSFKE 254 >gi|254427207|ref|ZP_05040914.1| Conserved region in glutamate synthase family [Alcanivorax sp. DG881] gi|196193376|gb|EDX88335.1| Conserved region in glutamate synthase family [Alcanivorax sp. DG881] Length = 1487 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 35/183 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ I+G GGT+ S + S R S + Sbjct: 998 DAQVSVKLVSEPGVGTVASGVAKAYADLITISGYDGGTAASPLTSIRYAGSP-----WEL 1052 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-PFL--------- 291 G+ ++ + GGL+ G+D++K+ ILGA G + P + Sbjct: 1053 GLAEAHQALRGNDLRDKIRLQTDGGLKTGLDVIKAAILGAESFGFGTVPMIVLGCKYLRI 1112 Query: 292 -------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + + + ++ + +E + LLG K + EL T Sbjct: 1113 CHLNNCATGVATQREDLRKEHFIGAPELLINYFTFVAQEVRELLALLGVKSIPELIGRTD 1172 Query: 333 LIR 335 L++ Sbjct: 1173 LLK 1175 >gi|256851623|ref|ZP_05557011.1| guanosine monophosphate reductase [Lactobacillus jensenii 27-2-CHN] gi|260661660|ref|ZP_05862572.1| guanosine monophosphate reductase [Lactobacillus jensenii 115-3-CHN] gi|282933272|ref|ZP_06338658.1| GMP reductase [Lactobacillus jensenii 208-1] gi|297205230|ref|ZP_06922626.1| GMP reductase [Lactobacillus jensenii JV-V16] gi|256615581|gb|EEU20770.1| guanosine monophosphate reductase [Lactobacillus jensenii 27-2-CHN] gi|260547717|gb|EEX23695.1| guanosine monophosphate reductase [Lactobacillus jensenii 115-3-CHN] gi|281302568|gb|EFA94784.1| GMP reductase [Lactobacillus jensenii 208-1] gi|297149808|gb|EFH30105.1| GMP reductase [Lactobacillus jensenii JV-V16] Length = 330 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 84/280 (30%), Gaps = 43/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 ++D L+ S E D S+ F + P++ M IN LAI A Sbjct: 12 YNDIQLVPNKCIIKSRKEADTSINFGNRTFKIPVV-------PANMQSVINEELAIWLAK 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 M + SF + ++G YDF + Sbjct: 65 NDYYYVM-------HRFEPQKRASFIKMMHDKKLFASISVGIKDDEYDFIDNLVKE---- 113 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + E I + +D K+ +P G + + Sbjct: 114 ----------NLIPEYITIDVAHGHSDYVIKMIKYIK-TKMPSSFLTAGNVATPEAVREL 162 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L M ++ IA Sbjct: 163 ENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAASK-PIIA 211 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R+ DI KS+ GAS+ + L +S V+ Sbjct: 212 DGGIRHNGDIAKSVRFGASMV-MIGSMLAGHEESPGNVIK 250 >gi|322392024|ref|ZP_08065487.1| GMP reductase [Streptococcus peroris ATCC 700780] gi|321145122|gb|EFX40520.1| GMP reductase [Streptococcus peroris ATCC 700780] Length = 327 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 98/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S EVD V P++ M ++ ++A K Sbjct: 10 YEDIQLIPNKCVVKSRSEVDTHVTLGNHTFKLPVV-------PANMQTILDEDVAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + YDF Q + A + Sbjct: 63 DG-----YFYIMHRFDEEGRIPFVKRMHDKGLIASISVGVKEYEYDFVSQLKNDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVISMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GA + G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGARMVMIGSLFAGHIESPGKTIEIDGEQFKEYYGSASEYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKKILLPVKGHLQDTLTEMEQDLQSAISYAGGRKVADLRHVDYVI 316 >gi|224372556|ref|YP_002606928.1| 2-nitropropane dioxygenase, NPD [Nautilia profundicola AmH] gi|223588698|gb|ACM92434.1| 2-nitropropane dioxygenase, NPD [Nautilia profundicola AmH] Length = 361 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 26/209 (12%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ L N+ +Y V+ A +A + G L ++ P +F D Sbjct: 84 RKICSDAPLGCNVLYAINDYGRVVKDACEAGVDIIITGAGLPMD------MPEYTKDFPD 137 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHR 228 ++ VP++ L + E + G GG + E Sbjct: 138 VAL----------VPIVSTGRAFKLIAKRWEKRYGRIPDAVIVEGPLSGGHQGFKYEDCL 187 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 E+ + + IP + + IA+GG+ + DI+K + LGA L + Sbjct: 188 KEENQLEHL-----IPDVRA--EVDKWDPNIPVIAAGGIWSHEDIVKFMELGADGVQLGT 240 Query: 289 PF-LKPAMDSSDAVVAAIESLRKEFIVSM 316 F L D+SD + + +KE IV M Sbjct: 241 RFALTHECDASDEFKQILLNAKKEDIVLM 269 >gi|124266813|ref|YP_001020817.1| inosine-5'-monophosphate dehydrogenase [Methylibium petroleiphilum PM1] gi|124259588|gb|ABM94582.1| inosine-5'-monophosphate dehydrogenase [Methylibium petroleiphilum PM1] Length = 489 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 47/227 (20%) Query: 108 FELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ---PN 163 FE R AP ++ V +N +++A +H + + + +N E+ Sbjct: 139 FETRLDAPVREIMTPRERLVSVNEGATLEEAKSLMHRHKLERVVV-VNAANELRGLFTVK 197 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 T + + + V + VG G + +E +K+G+ + G S Sbjct: 198 DITKQTNFPNAARDAQGKLRVGAAV-GVGEG-TEERVEALVKAGVDAIVVDTAHGHSKGV 255 Query: 224 IESHRDLESDIGI--------------------------------------VFQDWGIPT 245 IE R ++ + + G+P Sbjct: 256 IERVRWVKRNYPQVDVIGGNIATGEAALALAEAGADGVKVGIGPGSICTTRIVAGVGVPQ 315 Query: 246 PLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +++ IA GG+R DI K++ GA+ + F Sbjct: 316 ITAIDNVATALKGSGVPLIADGGIRYSGDIAKALAAGANTVMMGGMF 362 >gi|218438844|ref|YP_002377173.1| inosine 5-monophosphate dehydrogenase [Cyanothece sp. PCC 7424] gi|218171572|gb|ACK70305.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 7424] Length = 384 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 114/386 (29%), Gaps = 99/386 (25%) Query: 19 IDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---------- 66 I R D+ L+ R L D G + P++ S+M G Sbjct: 7 IARRSYGIDEIALVPGVRTL---DPSLADTRWTIGGLEREIPIIASAMDGVVDVNMAVLL 63 Query: 67 ------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 G N L A + VG + ++++ IK ++Q Sbjct: 64 SQLGALGVLNLEGIQTRYADPNPILDRIA-SVGKSEFVGLMQELYAEP--IKPELIKQRI 120 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 + AV L G + + V AD +F+ Q + + + ++ Sbjct: 121 TQIKEQGGIAAVSLTP-AGASQFGEVVAEAKADLVFV-----QATVVSTAHLSPTSITPL 174 Query: 175 -IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSR 223 +A M +P++L G ++ +K+G + G G G + Sbjct: 175 DLAEFCQKMPMPVIL---GNCVTYEVALNLMKAGAAAVLVGIGPGAACTSRGVLGVGVPQ 231 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + D + +++ G IA GG+ G DI K I GA Sbjct: 232 ATAVADCAAAREDYYRNTG--------------RYVPVIADGGIVTGGDICKCIACGADA 277 Query: 284 GGLASPFLKPAMD------------------------SSDAVVAAI-----------ESL 308 + SP + A + + I +L Sbjct: 278 VMIGSPIARSAEAPGRGFHWGMATPSPVLPRGTRINVGTTGTIKEILTGPAKLDDGTHNL 337 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 338 LGALKTSMGTLGAKDMKEMQQVEVVI 363 >gi|325926184|ref|ZP_08187542.1| glutamate synthase (NADPH) large subunit [Xanthomonas perforans 91-118] gi|325543366|gb|EGD14791.1| glutamate synthase (NADPH) large subunit [Xanthomonas perforans 91-118] Length = 1490 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|321312757|ref|YP_004205044.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis BSn5] gi|320019031|gb|ADV94017.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis BSn5] Length = 326 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 85/268 (31%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV G+ P++ M I+ LAI Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGGRTFKLPVV-------PANMQTIIDEKLAI---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 ++A + + F ++ + S +G Y+F Q A + Sbjct: 56 -QLAENGYFYVMHRFEPETRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|258424811|ref|ZP_05687685.1| guanosine monophosphate reductase [Staphylococcus aureus A9635] gi|257844975|gb|EEV69015.1| guanosine monophosphate reductase [Staphylococcus aureus A9635] Length = 325 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F KK P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTTIQFGPKKFKLPVV-------PANMQTVMNEKLAKWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + D A F ++ ++ L +++ +F + A Sbjct: 58 ENDYF------YIMHRFDEKARIPF--IKHMQNSGLFASISVGVKKAEFDFIE-KLAQEK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + ++ G + + Sbjct: 109 LIPEYITIDI----------AHGHSDSVINMIKHIKIHIPDSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKE 252 >gi|78045593|ref|YP_361768.1| glutamate synthase subunit alpha [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034023|emb|CAJ21668.1| glutamate synthase, alpha subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1490 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|74318785|ref|YP_316525.1| glutamate synthase subunit alpha [Thiobacillus denitrificans ATCC 25259] gi|74058280|gb|AAZ98720.1| glutamate synthase large subunit [Thiobacillus denitrificans ATCC 25259] Length = 1494 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 68/222 (30%), Gaps = 39/222 (17%) Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELG 203 H P +I P + + + L+ V + +K V Sbjct: 961 ASLRHCKPGTTLISPPPHHDIYSIEDLAQLIFDLKQVNPDALVSVKLVAEPGVGTIAAGV 1020 Query: 204 LKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 K+ I+G GGT S + S + G+ + A + Sbjct: 1021 AKAYADLITISGYDGGTGASPLTSV-----KYAGTPWELGLSEAQQVLRANGLRGRVRVQ 1075 Query: 263 ASGGLRNGVDILKSIILGASLGGLA-SPFL----------------------------KP 293 GGL+ G+D++K+ ILGA G P + + Sbjct: 1076 TDGGLKTGLDVIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGIATQNDTLRKEH 1135 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + VV + + +E M LG + + +L T L+ Sbjct: 1136 FIGLPGMVVNYFKFVAEETRELMAQLGVRSLTDLIGRTDLLE 1177 >gi|1934831|emb|CAB07955.1| unknown [Bacillus subtilis subsp. subtilis str. 168] Length = 326 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 83/268 (30%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV G P++ M I+ LAI+ + Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGGHTFKLPVV-------PANMQTIIDEKLAISLAE 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 + + F ++ + S +G Y+F Q A + Sbjct: 60 NG-----YFYVMHRFEPETRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|86609078|ref|YP_477840.1| inosine 5-monophosphate dehydrogenase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557620|gb|ABD02577.1| IMP dehydrogenase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 387 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 101/389 (25%), Gaps = 105/389 (26%) Query: 14 CKDPGIDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG----- 66 R D+ L R L VD G + P++ S+M G Sbjct: 5 LGRNRQARRAYGLDEIALAPGRRTL---DPSLVDTHFTLGGIQRQIPIIASAMDGVVDVR 61 Query: 67 -----------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS--DHNAIKS 107 G + LA A K QR+ + I+ Sbjct: 62 MAILLSELGAFGVLNLDGIQTRYADPDEVLAQIASVGKDEFVPLMQRLYSEPVKPDLIQE 121 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV--LGADGLFLHLNPLQEIIQPNGN 165 +RQ + + +G A + + A + +H P G Sbjct: 122 -RIRQIKAGGAIAAASSVPAHAAQYGPLVAEAGGDLFFVQATVVSVHHKV------PEGM 174 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------- 217 +A +M +P++ VG ++ +++G + G G Sbjct: 175 E-----LLDLAQFCRSMSIPVV---VGNCVTYDVALELMQAGAAGVLVGIGPGAACTSRG 226 Query: 218 --GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 G + + D + + G IA GGL G DI K Sbjct: 227 VLGVGVPQATAIADCAAAREQFLAETG--------------AYVPVIADGGLVTGGDICK 272 Query: 276 SIILGASLGGLASPF-----------------------------------LKPAMDSSDA 300 +I GA + SP L+ + Sbjct: 273 AIACGADAVMIGSPLARAYEAPGRGFHWGMATPSPILPRGTRIRVGSTGTLEEILRGPAR 332 Query: 301 VVAAIESLRKEFIVSMFLLGTKRVQELYL 329 + +L SM LG ++E+ Sbjct: 333 LDDGTHNLLGALRTSMATLGAANLREMQQ 361 >gi|198275264|ref|ZP_03207795.1| hypothetical protein BACPLE_01423 [Bacteroides plebeius DSM 17135] gi|198271847|gb|EDY96117.1| hypothetical protein BACPLE_01423 [Bacteroides plebeius DSM 17135] Length = 336 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 38/294 (12%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQR 96 F G L+ P++ISS G + +I + L A + ++ M GS + Sbjct: 15 LKTTFAGLTLNNPIIISSS--GLTNSLAKI-QKLEEAGAGAVVLKSVFEEQINMQAGSMQ 71 Query: 97 ------------VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 H + L + I + ++ D + + Sbjct: 72 GYGSPEADDYLGAYVRSHALNEHITLIEDVKKHCKIPVIASINCYSDSEWTDFARLMEEA 131 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L L++ LQ + + + + +P+++K + + I Sbjct: 132 GADALELNILSLQTSKDYTPGSFEQRHIDILRHIKKVVRIPVIMKLGSNLTNPVALINQL 191 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI---VFQD---WGIPTPLSLEMARPYCN 257 +G + R +I++ +++ D W T ++ Sbjct: 192 YANGAAAVVLFNRFYQPDIQIDNLTFTTANVMSSPSELSDRIRW---TAIASAEV----P 244 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 + + SGG+ NG ++KS++ GA+ + S + + + + + Sbjct: 245 QLDYAVSGGVHNGKGVIKSLLSGAAAVEVCSVIYQHGNQMIEEMKKELAEWMDD 298 >gi|297585005|ref|YP_003700785.1| glutamate synthase [Bacillus selenitireducens MLS10] gi|297143462|gb|ADI00220.1| Glutamate synthase (ferredoxin) [Bacillus selenitireducens MLS10] Length = 1502 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 97/270 (35%), Gaps = 35/270 (12%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 E + + S + K P +ISSM+ G+ R A AA++ Sbjct: 827 ESNVKPENVSTKVG--KHDMPFIISSMSFGSQNETAF--RAYAEAADRLNMISFNGEGGE 882 Query: 88 VAMAVGSQRVMFSDHNAIKSF--ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + +G A F + +L +G + G + + Sbjct: 883 IKDMLGKYPNTRGQQIASGRFGVNVELVNSTNLLEIKIGQGAKPGEGGHLPGSKVTDKVA 942 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDI 200 A + ++I P+ N + + +A + + + + +K Sbjct: 943 A---ARNATTGSDLISPSNNHDIYSIED-LAQMVTEIKTANDQAKVCVKVPIVPNIGTIA 998 Query: 201 ELGLKSGIRYFDIAGR-GGTSWSRIES--HRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 K+G + ++G GGT +R+ + H L ++IG+ + +L + + Sbjct: 999 VGIAKAGADFITLSGFDGGTGAARVHALQHVGLPAEIGVKAAHF------ALLES-GLRH 1051 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + A GG+++ +D K ++LGA+ G Sbjct: 1052 KVEIWADGGVKSALDAAKLMLLGANRIGFG 1081 >gi|167038115|ref|YP_001665693.1| response regulator receiver protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039173|ref|YP_001662158.1| response regulator receiver protein [Thermoanaerobacter sp. X514] gi|256750855|ref|ZP_05491739.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter ethanolicus CCSD1] gi|300913232|ref|ZP_07130549.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp. X561] gi|307723754|ref|YP_003903505.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp. X513] gi|320116521|ref|YP_004186680.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853413|gb|ABY91822.1| response regulator receiver protein [Thermoanaerobacter sp. X514] gi|166856949|gb|ABY95357.1| response regulator receiver protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750190|gb|EEU63210.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter ethanolicus CCSD1] gi|300889917|gb|EFK85062.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp. X561] gi|307580815|gb|ADN54214.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp. X513] gi|319929612|gb|ADV80297.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 484 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 72/448 (16%), Positives = 128/448 (28%), Gaps = 139/448 (31%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD LI A ++ +VD + K L+ PL+ + M T +K+ I R I Sbjct: 12 FDDVLLIP-AKSDVLPKDVDLKTKLTKKITLNIPLMSAGMDTVTESKLAIAIAREGGIGV 70 Query: 84 EKTKV-----AMAVG----SQRVMFSDH-NAIKSFELRQYAP--------------HTVL 119 + A+ V S+ + +D + ++ A + L Sbjct: 71 IHKNMSIERQALEVDKVKRSEHGVITDPFSLTPDHTIKDAAELMARYKISGVPITVDSKL 130 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------- 171 + + + ++ + K + V L+E Q L Sbjct: 131 VGIITNRDIRFEDDLDKPIREVMTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNV 190 Query: 172 ---SSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRYFDIAGRG 217 I + A++ P K+ VG G MD ++ +++G+ I Sbjct: 191 LKGLITIKDIEKAVEFPNAAKDSKGRLLVAAAVGVGKDMMDRVKALVEAGVDAIVIDTAH 250 Query: 218 GT-----------------------SWSRIESHRDLESDIGIVF---------------Q 239 G + + E+ RDL Sbjct: 251 GHSKGVLEAVSKIKEKYPDLQLIAGNVATAEATRDLIERGADCVKVGIGPGSICTTRVIA 310 Query: 240 DWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF------- 290 G+P ++ ++ IA GG++ DI+K+I GAS+ L S F Sbjct: 311 GVGVPQITAIYDCAQEADKYGIPIIADGGIKYSGDIVKAIAAGASVVMLGSLFAGTEESP 370 Query: 291 -------------------LKPAMDSS--------------DAVV----------AAIES 307 L + S + V + Sbjct: 371 GEIEIYQGRSYKVYRGMGSLGAMKEGSSDRYFQEDVTKFVPEGVEGRVPYKGPLKETVYQ 430 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALIR 335 L M G + ++EL T I+ Sbjct: 431 LVGGLRAGMGYCGVRNIEELRTKTKFIK 458 >gi|330468941|ref|YP_004406684.1| ferredoxin-dependent glutamate synthase [Verrucosispora maris AB-18-032] gi|328811912|gb|AEB46084.1| ferredoxin-dependent glutamate synthase [Verrucosispora maris AB-18-032] Length = 439 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%) Query: 207 GIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G + G GGT W+ R G+P L R + +A+G Sbjct: 303 GSDAVTVDGAQGGTGWA----PRA-------FLDQVGLPLGECLR--RIGHPQGCLLATG 349 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRKEFIVSMFLLGTKRV 324 + G ++++ LGA+ GL L + + ++ +E+L E + + +G R Sbjct: 350 RIWEGGRAVRALALGATAVGLGRAALLAVDEDPENGLIRLVEALALEARLLVSAVGKYRA 409 Query: 325 QELYLNTA 332 L Sbjct: 410 DALTAEDL 417 Score = 36.4 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 20/146 (13%) Query: 15 KDPGIDRNKKFFDDWHLIHRA-LPE-----ISF------DEVDPSVEFLGKKLSFPLLIS 62 + PG D L+ +P I D+VD G + P+ +S Sbjct: 51 ESPGPASVSDDLDQARLVPPVFMPRRLEKLIDLGREPLHDDVDLDTVIGGFRSPLPVYVS 110 Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 + G + A + + M +G + + + R A + +++ Sbjct: 111 AF-GSTRVASGDAGIAASRQAGRLGIPMVIG------ENMVPVGGYR-RAEAAQSPILAR 162 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADG 148 L A GV AD Sbjct: 163 LRAYAQECPPGVGGVVVQQSTEDADS 188 >gi|326692580|ref|ZP_08229585.1| inosine-5'-monophosphate dehydrogenase [Leuconostoc argentinum KCTC 3773] Length = 326 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 108/329 (32%), Gaps = 56/329 (17%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGG---NNKMIERINR 77 +D L+ LP V + + L+ PL+ + G + +N Sbjct: 11 GYDQVLLVPGASNVLPHT----VSLATQLADNFTLNIPLIAEA-NGTVTDSRVAATALNG 65 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG---AVQLNYDFGV 134 L + AE+ +A + + + + P L + A ++ G Sbjct: 66 GLGVIAEQEDIAAQAAAVAAAKATVVDLDKY------PKAFLDAQGRVRVAAEVWLTTGA 119 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 Q+ + GAD +F +L Q + N + + A + VG Sbjct: 120 QERVAELVAAGADAIFFYL---QAGLNKETN-------DIVKAVRKAFPTTFIA--VGVV 167 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + G+ G S L ++ F + T +++ Sbjct: 168 EDQGIAGALYQDGVDAVIA----GRSVDS-----QLPNNALYPF----LTTTMAIAEVAA 214 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA----AIESLRK 310 ++A IA+GG+ D++K+I GA +A LK + +D A +I+ Sbjct: 215 DYDKA-VIATGGVHYSGDVVKAISAGADAILVAD-LLKGEVLEADGTFAGGDVSIDDAIF 272 Query: 311 E----FIVSMFLLGTKRVQELYLNTALIR 335 + M G+ + +L L ++ Sbjct: 273 QADGGLRAGMGYTGSSTIVDLKLTAQFVQ 301 >gi|221311155|ref|ZP_03593002.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] gi|221315482|ref|ZP_03597287.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320397|ref|ZP_03601691.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324681|ref|ZP_03605975.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767737|ref|NP_391093.2| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. subtilis str. 168] gi|254763299|sp|O05269|GUAC_BACSU RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|225185365|emb|CAB15203.2| GMP reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 326 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 83/268 (30%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV G P++ M I+ LAI+ + Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGGHTFKLPVV-------PANMQTIIDEKLAISLAE 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 + + F ++ + S +G Y+F Q A + Sbjct: 60 NG-----YFYVMHRFEPETRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|21240807|ref|NP_640389.1| glutamate synthase subunit alpha [Xanthomonas axonopodis pv. citri str. 306] gi|21106074|gb|AAM34925.1| glutamate synthase alpha subunit [Xanthomonas axonopodis pv. citri str. 306] Length = 1490 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|294084807|ref|YP_003551567.1| glutamate synthase (ferredoxin) [Candidatus Puniceispirillum marinum IMCC1322] gi|292664382|gb|ADE39483.1| Glutamate synthase (ferredoxin) [Candidatus Puniceispirillum marinum IMCC1322] Length = 1515 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D + +K V K+ ++G GG + + +S + + G Sbjct: 1028 DAKVCVKLVASTGIGTIAAGVAKAKADAILVSGHGGGTGASPQSSI----KYAGLPWEMG 1083 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS-------------- 288 + + N+ GGL+ G DI+ + +LGA G+ + Sbjct: 1084 LSEVHQVLSMNDLRNKVVLRTDGGLKTGRDIVMAAMLGADEYGIGTSSLIAMGCIMVRQC 1143 Query: 289 -----PF--------LKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 P L+ + + + VV L +E + LG ++++ T L+ Sbjct: 1144 HSNTCPVGVCTQRDDLRAKFEGTPEKVVQLFTHLAEEVREILASLGFTSLEDVIGRTDLL 1203 Query: 335 RH 336 Sbjct: 1204 SQ 1205 >gi|259501104|ref|ZP_05744006.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners DSM 13335] gi|302190448|ref|ZP_07266702.1| inosine-5-monophosphate dehydrogenase [Lactobacillus iners AB-1] gi|309803845|ref|ZP_07697930.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 11V1-d] gi|309804747|ref|ZP_07698812.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 09V1-c] gi|309805859|ref|ZP_07699894.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 03V1-b] gi|309808877|ref|ZP_07702758.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 01V1-a] gi|309809390|ref|ZP_07703252.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners SPIN 2503V10-D] gi|312870800|ref|ZP_07730906.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 3008A-a] gi|312873081|ref|ZP_07733140.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2062A-h1] gi|312873394|ref|ZP_07733445.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2052A-d] gi|312875433|ref|ZP_07735437.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2053A-b] gi|315653838|ref|ZP_07906754.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners ATCC 55195] gi|325911456|ref|ZP_08173868.1| IMP dehydrogenase [Lactobacillus iners UPII 143-D] gi|325913267|ref|ZP_08175635.1| IMP dehydrogenase [Lactobacillus iners UPII 60-B] gi|329920504|ref|ZP_08277236.1| IMP dehydrogenase [Lactobacillus iners SPIN 1401G] gi|259167798|gb|EEW52293.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners DSM 13335] gi|308164079|gb|EFO66341.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 11V1-d] gi|308166139|gb|EFO68357.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 09V1-c] gi|308167768|gb|EFO69912.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 03V1-b] gi|308167875|gb|EFO70012.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LactinV 01V1-a] gi|308170301|gb|EFO72332.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners SPIN 2503V10-D] gi|311089096|gb|EFQ47536.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2053A-b] gi|311091078|gb|EFQ49471.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2052A-d] gi|311091314|gb|EFQ49699.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 2062A-h1] gi|311093676|gb|EFQ52014.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners LEAF 3008A-a] gi|315488534|gb|EFU78180.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus iners ATCC 55195] gi|325476806|gb|EGC79960.1| IMP dehydrogenase [Lactobacillus iners UPII 143-D] gi|325477370|gb|EGC80514.1| IMP dehydrogenase [Lactobacillus iners UPII 60-B] gi|328936180|gb|EGG32633.1| IMP dehydrogenase [Lactobacillus iners SPIN 1401G] Length = 380 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 94/281 (33%), Gaps = 55/281 (19%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI-------- 72 FDD LI LP +EVD SV+ KL+ P + + M T + M Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSVKLADNIKLNLPFISAGMDTVTESSMAIAMALQGG 70 Query: 73 -ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 I++N++I A+ +VA G A+ N V Sbjct: 71 MGVIHKNMSIVAQAGEVATVKGVMLSGNFTRAAVDE-------------ENKLLVAAAVG 117 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 +A +L A + ++ + + A + KI + L+ Sbjct: 118 VTSDTFQRAQALLEAGANAIVIDTA--------HGHSAGVLRKIKEIREHFPKATLI--A 167 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G ++ + SG+ + G+ + + G+P ++ Sbjct: 168 GNVATAEGTKALFDSGVDIVKVGIGPGSICTT------------RIIAGVGVPQITAIYD 215 Query: 252 ARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 A E IA GG++ DI+K+I G + L S F Sbjct: 216 AASVAREYGKTIIADGGIKYSGDIVKAIAAGGNAVMLGSMF 256 >gi|293365564|ref|ZP_06612273.1| GMP reductase [Streptococcus oralis ATCC 35037] gi|307703519|ref|ZP_07640461.1| guanosine monophosphate reductase [Streptococcus oralis ATCC 35037] gi|291315932|gb|EFE56376.1| GMP reductase [Streptococcus oralis ATCC 35037] gi|307622926|gb|EFO01921.1| guanosine monophosphate reductase [Streptococcus oralis ATCC 35037] Length = 328 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHSFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPNTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQLKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRKVADLKHVDYVI 316 >gi|294625578|ref|ZP_06704204.1| glutamate synthase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666358|ref|ZP_06731605.1| glutamate synthase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600143|gb|EFF44254.1| glutamate synthase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603855|gb|EFF47259.1| glutamate synthase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1490 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + E+ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|323464050|gb|ADX76203.1| glutamate synthase [Staphylococcus pseudintermedius ED99] Length = 525 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 104/349 (29%), Gaps = 69/349 (19%) Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA---VGSQRVMFSDHNAIKS- 107 G+ ++ P + + G + + +N AI A + MA + + SD++ Sbjct: 167 GEHVAHPFYVKRLVGQSGMSYGALGKN-AITALSKGLGMANTWMNTGEGGLSDYHLAGDV 225 Query: 108 ----------FELRQYA----PHTVLI----SNLGAVQLNYDFGVQKAHQAVH---VLGA 146 F +R P + + + A ++ G + + V Sbjct: 226 DIIFQIGPGLFGVRDEHGQFDPDHFMAVAQHTQVKAFEIKLAQGAKTRGGHIEGKKVTEE 285 Query: 147 DGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGC----GLSSMD 199 L P + + PN N DL I L P+ K V +D Sbjct: 286 IAKIRKLQPYETVDSPNRFDFINNAYDLLKWIDELREMSQKPVGFKMVLGRKDDFKQLID 345 Query: 200 IELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 L+ + I G GGT + E + + P L A ++ Sbjct: 346 AMQTLQIYPDFITIDGGEGGTGATFQELQDGVGLPLFTAL-----PIIDGLLKAHQLRDK 400 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM---------------------DS 297 + ASG L I ++ LGA L +A + Sbjct: 401 VKIFASGKLVTPDKIAIALALGADLVNVARAMMISVGCIMSRQCHKNICPVGVATTDPKK 460 Query: 298 SDAVV---------AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 +A+V I SL + +G K E+ I++Q Sbjct: 461 EEALVVDEKQYRVTNYITSLHEGLFNIAAAVGVKSPTEIGPEHVTIKYQ 509 >gi|291485663|dbj|BAI86738.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. natto BEST195] Length = 326 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV G+ P++ M I+ LAI+ + Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGGRTFKLPVV-------PANMQTIIDEKLAISLAE 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 + + F ++ + S +G Y+F Q A + Sbjct: 60 NG-----YFYVMHRFEPEKRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|239826037|ref|YP_002948661.1| glutamate synthase (ferredoxin) [Geobacillus sp. WCH70] gi|239806330|gb|ACS23395.1| Glutamate synthase (ferredoxin) [Geobacillus sp. WCH70] Length = 1505 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 33/268 (12%) Query: 38 EISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK---------- 87 ++ ++VD SV G+ S P +I+SM+ G+ + R A AA++ Sbjct: 837 QVPVEKVDISV---GEH-SLPFVIASMSFGSQNEVAF--RAYAEAADRLNMVSLNGEGGE 890 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 + +G A F + +L +G + G + + + Sbjct: 891 IKDMLGKYPRTRGQQIASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIA 950 Query: 145 GADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 A + ++I P+ N + DL+ IA L +A D + +V + I Sbjct: 951 EARNATI----GSDLISPSNNHDIYSIEDLAQMIAELKTANDKAKVAVKVPVVPNIGTIA 1006 Query: 202 L-GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 + K+G ++G GGT +RI + + + + + G+ + + N+ Sbjct: 1007 VGIAKAGADIITLSGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGLRNKV 1061 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLA 287 + A GG+++ +D+LK ++LGA+ G Sbjct: 1062 EIWADGGIKSALDVLKVMLLGANRIGFG 1089 >gi|239637026|ref|ZP_04678020.1| guanosine monophosphate reductase [Staphylococcus warneri L37603] gi|239597376|gb|EEQ79879.1| guanosine monophosphate reductase [Staphylococcus warneri L37603] Length = 325 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 93/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D S++F + P++ M +N +LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTSIQFGPRSFKLPVV-------PANMQTVMNEDLAQWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + + A F + + H ++G + ++F Q A+ Sbjct: 58 ENDYF------YIMHRFNEAARIPFIKKMQSNHLFASISVGVKKTEFEFIEQLAN---EE 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + + + + + + + I + S + ++ G + + Sbjct: 109 ITPEYITIDI----------AHGHSDSVINMIKHIKSYLPNSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNLCSKAARKPLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELEGKRYKE 252 >gi|148993858|ref|ZP_01823260.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP9-BS68] gi|168489076|ref|ZP_02713275.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP195] gi|147927683|gb|EDK78708.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP9-BS68] gi|183572374|gb|EDT92902.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP195] gi|332073587|gb|EGI84066.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA17570] Length = 328 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPTKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|319892356|ref|YP_004149231.1| GMP reductase [Staphylococcus pseudintermedius HKU10-03] gi|317162052|gb|ADV05595.1| GMP reductase [Staphylococcus pseudintermedius HKU10-03] Length = 325 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 90/289 (31%), Gaps = 46/289 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E+D SV+F K+ P++ M +N +LA A+ Sbjct: 6 YEDIQLIPNKSIVKSRSEIDTSVQFGPKRFKLPVV-------PANMQTVMNESLAEWFAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D A F +++ L +++ +F A +A L Sbjct: 59 NDYF------YIMHRFDEAARLPF-VKKMQSKG-LYASISVGVKLGEFEFIDALKA-ENL 109 Query: 145 GADGLFL---HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + + H + Q I I + + ++ G + + Sbjct: 110 TPEYITIDIAHGHSDQVIGM-------------IQYIKEHLPKAFVI--AGNVGTPEGVR 154 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + G + G W L+ Sbjct: 155 ELENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAAVNHCSKAARKPI 203 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 IA GG+R DI KS+ GAS+ + S F + V + ++ Sbjct: 204 IADGGIRTHGDIAKSVRFGASMVMIGSLFAAHEESPGETVEIEGKKYKE 252 >gi|315648774|ref|ZP_07901869.1| 2-nitropropane dioxygenase NPD [Paenibacillus vortex V453] gi|315275742|gb|EFU39094.1| 2-nitropropane dioxygenase NPD [Paenibacillus vortex V453] Length = 368 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 65/282 (23%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA-IKSFELRQY 113 + +P+ ++ M GG + L A +G+ + + A +S + + Sbjct: 13 IRYPVFLAGMAGGPS------TAELVAAVSDAG---GLGTLGAAYMEPAAIRQSIQDIRK 63 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH-LNPLQEIIQ-PNGNTN---F 168 NL A A QA L G H LN ++E + P + Sbjct: 64 LTDKPFAVNLFA---------STATQASDNLDRIGEVQHELNRMRETLGIPQAGADQVAA 114 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSM---------------------DIELGLKSG 207 D K + VP++ G+ + + ++G Sbjct: 115 PDWFEKQFTVLLEEKVPVI--STAFGILPEPLMRQAKAANLLVVTMVTTVNEALMAEQAG 172 Query: 208 IRYF-----DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 D G GT + E + ++IG SL + I Sbjct: 173 CDAIVAQGSDAGGHRGT-FDLTEHP--MGANIGTF----------SLVPQIVDQVKIPVI 219 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 A+GG+ +G ++ S++LGA + + FL + V Sbjct: 220 AAGGVMDGRGLVASLVLGAQGVQMGTRFLTALESGAHEVYKQ 261 >gi|322389527|ref|ZP_08063078.1| GMP reductase [Streptococcus parasanguinis ATCC 903] gi|321143802|gb|EFX39229.1| GMP reductase [Streptococcus parasanguinis ATCC 903] Length = 344 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 103/347 (29%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V+F P++ M ++ N+A Sbjct: 27 YEDIQLIPNKCIINSRSEADTTVQFGNHTFKLPVV-------PANMQTILDENVAE---- 75 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G + YDF Q A + Sbjct: 76 -QLARGGYFYIMHRFDEAGRIPFVKRMHDQGLIASISVGVKEYEYDFVSQLKADAPEYIT 134 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + +IQ + + ++ G + + Sbjct: 135 IDIAHGHADSVIRMIQ---------------HIKKELPDTFVI--AGNVGTPEAVRELEN 177 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 178 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIADG 226 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 227 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEIDGESFKEYYGSASEYQKGAYKN 286 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ S+ G +++ +L +I Sbjct: 287 VEGKKILLPAKGHLQDTLTEMEQDLQSSISYAGGRKLADLKHVDYVI 333 >gi|221231943|ref|YP_002511095.1| GMP reductase [Streptococcus pneumoniae ATCC 700669] gi|254800137|sp|B8ZJR9|GUAC_STRPJ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|220674403|emb|CAR68953.1| GMP reductase [Streptococcus pneumoniae ATCC 700669] Length = 328 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|307708797|ref|ZP_07645259.1| guanosine monophosphate reductase [Streptococcus mitis NCTC 12261] gi|307615163|gb|EFN94374.1| guanosine monophosphate reductase [Streptococcus mitis NCTC 12261] Length = 328 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKDYEYDFVSQLKSDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|58424394|gb|AAW73431.1| glutamate synthase, alpha subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 1528 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1047 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1099 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1100 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1159 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + ++ T L Sbjct: 1160 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDDIVGRTDL 1219 Query: 334 IRH 336 + Sbjct: 1220 LEQ 1222 >gi|255711418|ref|XP_002551992.1| KLTH0B04708p [Lachancea thermotolerans] gi|238933370|emb|CAR21554.1| KLTH0B04708p [Lachancea thermotolerans] Length = 2159 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1100 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1151 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1152 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATVPLIAMGCIMLRKCHLN 1211 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P L+ + V+ L ++ M LG + + E+ Sbjct: 1212 ACAVGIATQDPLLREKFKGQPEHVINFFYYLIQDLRKIMAKLGFRTIDEM 1261 >gi|84621814|ref|YP_449186.1| glutamate synthase subunit alpha [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122878988|ref|YP_198816.6| glutamate synthase subunit alpha [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365754|dbj|BAE66912.1| glutamate synthase alpha subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 1490 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + ++ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDDIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|320546669|ref|ZP_08040981.1| GMP reductase [Streptococcus equinus ATCC 9812] gi|320448724|gb|EFW89455.1| GMP reductase [Streptococcus equinus ATCC 9812] Length = 327 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 81/279 (29%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V P++ M I+ ++A K Sbjct: 10 YEDIQLIPNKCIIKSRSEADTHVTLGDYTFKLPVV-------PANMQTIIDEDIAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D + K F R + + ++G YDF A + Sbjct: 63 DG-----YFYIMHRFDEASRKPFVKRMHDQDLIASISVGVKDYEYDFVSSLKDDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + + I + + ++ G + + Sbjct: 118 IDIAHGHSD---------------SVINMIKHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 G+R DI KSI GA++ + S F +S +V Sbjct: 210 GIRTHGDIAKSIRFGATIVMIGSLFAGHL-ESPGKLVEV 247 >gi|227529762|ref|ZP_03959811.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus vaginalis ATCC 49540] gi|227350246|gb|EEJ40537.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus vaginalis ATCC 49540] Length = 380 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 94/274 (34%), Gaps = 45/274 (16%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGNNKMIERINRN 78 FDD LI LP +EVD S + KL+ P++ + M T G + + Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPIISAGMDTVTEGAMAIAMALQGG 70 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV-QLNYDFGVQKA 137 L + + M++ +Q ++ +KS + A + + Sbjct: 71 LGVVHKN----MSIQAQAGEVAN---VKSVVVPASATKAAVDDQHRLLCAAAVGVTSDTF 123 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLS 196 +A +L A + ++ + + A + KI + DV L+ V G Sbjct: 124 ERAQALLDAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPDVTLIAGNVATG-- 173 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + +G+ + G+ + V G+P ++ A Sbjct: 174 -SATKALYDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAAQVA 220 Query: 257 NEA--QFIASGGLRNGVDILKSIILGASLGGLAS 288 E IA GG++ D++K++ G + L Sbjct: 221 REYGKPIIADGGIKYSGDVVKALAAGGNAVMLGG 254 >gi|294497912|ref|YP_003561612.1| putative flavoenzyme [Bacillus megaterium QM B1551] gi|294347849|gb|ADE68178.1| putative flavoenzyme [Bacillus megaterium QM B1551] Length = 524 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 13/150 (8%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV---PLLLKEVGCGLS--SMDIELGL 204 +L P + + PN FA + DV P+ +K V + Sbjct: 289 IRNLKPGESVDSPNRFKEFASYPEMFQFIEKLRDVGGKPVGIKMVVGNTNDLEEMAAYMK 348 Query: 205 K--SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 + SG + I G GGT S E + +F G+P L +E + Sbjct: 349 ETGSGPDFITIDGAEGGTGASFQELA---DGAGVPLFS--GLPFVDELLKKYGVRDEVKL 403 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL 291 ASG L + ++ LGA +A F+ Sbjct: 404 FASGKLLTADKVATALSLGADCVNIARGFM 433 >gi|189460456|ref|ZP_03009241.1| hypothetical protein BACCOP_01097 [Bacteroides coprocola DSM 17136] gi|189432842|gb|EDV01827.1| hypothetical protein BACCOP_01097 [Bacteroides coprocola DSM 17136] Length = 325 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 94/295 (31%), Gaps = 40/295 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGSQR 96 F G L P++ISS G E+I + L A + +++M GS + Sbjct: 4 LKTTFAGLALENPIIISSS--GLTNSAEKI-KKLEEAGAGAVVLKSVFEEQISMQAGSMQ 60 Query: 97 ------------VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 H + L + I + ++ D + Sbjct: 61 GYGSPEADDYLGAYVRSHALNEHINLIEETKKICHIPVIASINCYSDSEWVDFATMMEKA 120 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L +++ LQ + + + + +P+++K + + I Sbjct: 121 GADALEINILSLQTDKDYTPGSFEQRHIDILCHIKKVVKIPVIMKLGSNLTNPVALINQL 180 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL-------EMARPYC 256 +G + R + + + + D + + TP L +A Sbjct: 181 YANGAAAVVLFNR----FYQTDINIDTMAFTSANV----MSTPNELPDRLRWTAIASAAV 232 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 + SGG+ G ++KSI+ GA+ + S + + + + E Sbjct: 233 PRLDYAVSGGVHCGKGVIKSILAGAAAVEVCSVIYQYGAKEIENMKKELSEWMDE 287 >gi|226228487|ref|YP_002762593.1| glutamate synthase [NADPH] large chain [Gemmatimonas aurantiaca T-27] gi|226091678|dbj|BAH40123.1| glutamate synthase [NADPH] large chain [Gemmatimonas aurantiaca T-27] Length = 1550 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 40/210 (19%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKS 206 H P +I P + + + +A L + + +K V K+ Sbjct: 1003 HSTPGVGLISPPPHHDIYSIED-LAQLVHDLKTVNPRARVGVKLVAESGVGTVAAGVAKA 1061 Query: 207 GIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 Y IAG GGT S + S + S + G+ + +A + + G Sbjct: 1062 FADYVLIAGHNGGTGASPLSSIKHAGSP-----WELGLAEAQQVLVANGLRHRVEVRVDG 1116 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDS 297 GL N D++ + +LGA G + L + Sbjct: 1117 GLTNARDVIIAALLGAESYGFGTAPLVALGCDMARQCHLNTCPTGIATQREDLRAKFRGT 1176 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ L ++ + LLG + + E+ Sbjct: 1177 PEHVIDYFSRLAEDVRTELALLGARSLTEI 1206 >gi|188574441|ref|YP_001911370.1| glutamate synthase subunit alpha [Xanthomonas oryzae pv. oryzae PXO99A] gi|188518893|gb|ACD56838.1| glutamate synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 1462 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 981 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1033 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1034 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1093 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + ++ T L Sbjct: 1094 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDDIVGRTDL 1153 Query: 334 IRH 336 + Sbjct: 1154 LEQ 1156 >gi|225868508|ref|YP_002744456.1| GMP reductase [Streptococcus equi subsp. zooepidemicus] gi|259647695|sp|C0MF02|GUAC_STRS7 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|225701784|emb|CAW99190.1| GMP reductase [Streptococcus equi subsp. zooepidemicus] Length = 327 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ +A Sbjct: 10 YEDIQLIPNKCIINSRSEADTSVRLGNYTFKLPVI-------PANMQTIIDETIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D K F R + + ++G YDF A + Sbjct: 59 -QLARDGYFYIMHRFDEQGRKPFIQRMHEQQLIASISVGVKDYEYDFVSSLKEDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVIKMIKHIKAELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + ++ + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V +S ++ Sbjct: 210 GIRTHGDIAKSIRFGATMVMIGSLFAGHIESPGKMVEIDGQSFKE 254 >gi|166710021|ref|ZP_02241228.1| glutamate synthase subunit alpha [Xanthomonas oryzae pv. oryzicola BLS256] Length = 1490 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1009 VSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1061 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF----------- 290 S +A GGL+ G+D++K+ +LGA G +P Sbjct: 1062 VAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRIC 1121 Query: 291 ---------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + + V L +E + LG + + ++ T L Sbjct: 1122 HLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDDIVGRTDL 1181 Query: 334 IRH 336 + Sbjct: 1182 LEQ 1184 >gi|307706719|ref|ZP_07643524.1| guanosine monophosphate reductase [Streptococcus mitis SK321] gi|307617804|gb|EFN96966.1| guanosine monophosphate reductase [Streptococcus mitis SK321] Length = 328 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGKHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKDDAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|116780244|gb|ABK21603.1| unknown [Picea sitchensis] Length = 236 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + N+K F+ R L I +VD S LG K+S P++I+ Sbjct: 29 AEDQWTLHENRKAFERIRFRPRIL--IDVTKVDLSTTVLGFKISMPIMIAPTA 79 Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 276 SIILGASLGGLASPFL-KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 ++ LGAS + P + A + V ++ LR EF ++M L G V+E+ N Sbjct: 166 ALALGASGIFIGRPVVFSLAAEGEAGVRNVLQMLRDEFELTMALAGCCSVKEINRN 221 >gi|295425781|ref|ZP_06818465.1| inosine-5-monophosphate dehydrogenase [Lactobacillus amylolyticus DSM 11664] gi|295064532|gb|EFG55456.1| inosine-5-monophosphate dehydrogenase [Lactobacillus amylolyticus DSM 11664] Length = 380 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 89/286 (31%), Gaps = 57/286 (19%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLG-KKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + G KL+ PL+ + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTKLAGNLKLNIPLISAGM------- 53 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + + A + + V K+ +R A +N+ +V + Sbjct: 54 -DTVTEGAMAIAMALQGGLGV-----------VHKNMSIRAQAGEV---ANVKSVVVPNG 98 Query: 132 FGVQKAHQAVHVLGADGLFLHLNPLQ-----------EIIQPNGNTNFADLSSKIALLSS 180 +L A + + N + I+ + + A + KI Sbjct: 99 ATKAAVDDQNRLLCAAAVGVTSNTFERAEALLEAGADAIVIDTAHGHSAGVLRKIKEFRE 158 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 L+ G + +G+ + G+ + + Sbjct: 159 HFPNQTLI--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAG 204 Query: 241 WGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 G+P ++ A E IA GG++ D++K++ G + Sbjct: 205 VGVPQITAIYDAATAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|195978159|ref|YP_002123403.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974864|gb|ACG62390.1| GMP reductase GuaC [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 328 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ +A Sbjct: 11 YEDIQLIPNKCIINSRSEADTSVRLGNYTFKLPVI-------PANMQTIIDETIAE---- 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D K F R + + ++G YDF A + Sbjct: 60 -QLARDGYFYIMHRFDEQGRKPFIQRMHEQQLIASISVGVKDYEYDFVSSLKEDAPEFIT 118 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + I + + + ++ G + + Sbjct: 119 IDIAHGHAD---------------SVIKMIKHIKAELPETFVI--AGNVGTPEAVRELEN 161 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + ++ + IA G Sbjct: 162 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVRWCAKAARK-PIIADG 210 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F V +S ++ Sbjct: 211 GIRTHGDIAKSIRFGATMVMIGSLFAGHIESPGKMVEIDGQSFKE 255 >gi|163743643|ref|ZP_02151019.1| glutamate synthase family protein [Phaeobacter gallaeciensis 2.10] gi|161383114|gb|EDQ07507.1| glutamate synthase family protein [Phaeobacter gallaeciensis 2.10] Length = 497 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 98/309 (31%), Gaps = 60/309 (19%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLL------ISSMTGGNNKMIERINRNLAIAAE 84 ++ A P + D+ +G P + IS M+ G R L+ A+ Sbjct: 111 FVNAAFPALDDDKACCEPRLIGPTARQPYMAPSFFNISGMSYGALSAPAV--RALSHGAK 168 Query: 85 KTKVAMAVG--------------------SQRVMFSDHNAIKSFE-LRQYAP-HTVLISN 122 + + M G + + D N + S + LR+ A V + Sbjct: 169 EAGIWMNTGEGGLSPYHLEGGCDVVFQIGTAKYGVRDENGVLSDDHLRKVASYDAVRMFE 228 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIALLS 179 L Q G V + ++ I PN + A+ L IA + Sbjct: 229 LKLAQ-GAKPGKGGILPGAKVTQQIAEIRGIPEGEDSISPNRHPEIANYDELLDMIAHVR 287 Query: 180 SAMDVPLLLKEV---GCGLSSMDIELGL---KSGIRYFDI-AGRGGTSWSRIE------- 225 P+ +K V L M + + + + G GGT + + Sbjct: 288 EVTGKPVGIKMVVGAEAALREMFLHIAARKDDGAPDFITVDGGEGGTGAAPMPLIDLVGM 347 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S R+ + + ++G+ + + IASG L N DI ++ GA Sbjct: 348 SVREALPLMCNLRDEYGL------------KDRIRLIASGKLVNPGDIAWALAAGADFVT 395 Query: 286 LASPFLKPA 294 A F+ Sbjct: 396 SARGFMFSL 404 >gi|195127541|ref|XP_002008227.1| GI11930 [Drosophila mojavensis] gi|193919836|gb|EDW18703.1| GI11930 [Drosophila mojavensis] Length = 2117 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1077 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1136 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 1137 KN--------AGLPWELGIAETHQVLVLNNLRSRVVVQADGQLRTGFDVVVAALLGADEF 1188 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1189 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRQIM 1248 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1249 ANLGIRKFQDLIGRTDLLR 1267 >gi|73662729|ref|YP_301510.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|83288226|sp|Q49XD2|GUAC_STAS1 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|72495244|dbj|BAE18565.1| putative GMP reductase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 328 Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 86/280 (30%), Gaps = 44/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D L+ S E D +++F + P++ M +N LA AE Sbjct: 6 YEDIQLVPNKCIVNSRSECDTTIQFGPRSFKLPVV-------PANMQTVMNETLAEWFAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D F + L +++ +FG V L Sbjct: 59 NDYF------YIMHRFDEEGRIPF--IKKMQEKGLFASISVGVKEREFGF------VESL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMD-VPLLLKEVGCGLSSMDIEL 202 A+ N + E I + +D + + I + + V ++ VG + + Sbjct: 105 AAE------NVIPEYITIDIAHGHSDSVINMIKHIKKHIPEVFVIAGNVG---TPEGVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W LS I Sbjct: 156 LENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLSALNHCSKAARKPII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R DI KSI GAS+ + S F + V Sbjct: 205 ADGGIRTHGDIAKSIRFGASMVMVGSLFAAHEESPGETVE 244 >gi|195376481|ref|XP_002047025.1| GJ12156 [Drosophila virilis] gi|194154183|gb|EDW69367.1| GJ12156 [Drosophila virilis] Length = 2125 Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1085 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1144 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 1145 KN--------AGLPWELGIAETHQVLVLNNLRSRVVVQADGQLRTGFDVVVAALLGADEF 1196 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1197 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRQIM 1256 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1257 ANLGIRKFQDLIGRTDLLR 1275 >gi|307704935|ref|ZP_07641826.1| guanosine monophosphate reductase [Streptococcus mitis SK597] gi|307621549|gb|EFO00595.1| guanosine monophosphate reductase [Streptococcus mitis SK597] Length = 328 Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|167464102|ref|ZP_02329191.1| Glutamate synthase (ferredoxin) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383277|ref|ZP_08057077.1| glutamate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152397|gb|EFX45196.1| glutamate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 1508 Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 100/274 (36%), Gaps = 34/274 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------V 88 I VD SV P+LISSM+ G+ R A A E+ + Sbjct: 835 IDPSLVDISV----GDHDLPMLISSMSFGSQNETAF--RAYAEAGERLNMVTMNGEGGEI 888 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGAD- 147 +G+ + A F + + V + Q + H + A Sbjct: 889 KDMLGNYKRTRGAQVASGRFGVNVELANAVAFLEIKIGQGA--KPGEGGHLPGSKVTAKV 946 Query: 148 GLFLHLNPLQEIIQPNGNTNFADLSSKIALL-----SSAMDVPLLLKEVGCGLSSMDIEL 202 + ++I P+ N + + ++ +S +++K Sbjct: 947 AAARNATIGSDLISPSNNHDIYSIEDLAQIISELKEASGRKAKIIVKVPVVPGIGTIAVG 1006 Query: 203 GLKSGIRYFDIAGR-GGTSWSRIES--HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 K+G ++G GGT +RI S H L ++IG ++L A ++ Sbjct: 1007 VAKAGADVITLSGFDGGTGAARIHSLTHVGLLTEIGTKLAH------VALIEA-GLRHKI 1059 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + + GG+++G D+LK I+LGA+ G S ++ Sbjct: 1060 EIWSDGGMKSGADVLKMILLGANRCGFGSLAMQA 1093 >gi|237750426|ref|ZP_04580906.1| inositol-5-monophosphate dehydrogenase [Helicobacter bilis ATCC 43879] gi|229373956|gb|EEO24347.1| inositol-5-monophosphate dehydrogenase [Helicobacter bilis ATCC 43879] Length = 481 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 26/182 (14%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 LG +++ GV + +A ++ A L L+ + + ++ + + + S + Sbjct: 213 LGRLRVGAAVGVNQIDRASALVEAGVDVLVLDSA--------HGHSKNVINTLKEIKSKL 264 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DV ++ VG ++ + + +G + G+ + + G Sbjct: 265 DVDVI---VGNVVTGEATKDLILAGADAIKVGIGPGSICTT------------RIVAGVG 309 Query: 243 IPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +P +++ E IA GG++ D+ K++ +GAS + L +S Sbjct: 310 MPQVSAIDGCARVAKEYQIPIIADGGIKYSGDVAKALAVGASSV-MIGSLLAGTEESPGD 368 Query: 301 VV 302 +V Sbjct: 369 LV 370 >gi|171915120|ref|ZP_02930590.1| Glutamate synthase (ferredoxin) [Verrucomicrobium spinosum DSM 4136] Length = 1522 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 56/182 (30%), Gaps = 34/182 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+ I+G GGT S + S + + G+ Sbjct: 1030 RVCVKLVAESGVGTVAAGVAKANADIILISGHDGGTGASPLSSI-----KHAGLPWELGL 1084 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL-------------------- 283 + M + GGLRNG DI + ILGA Sbjct: 1085 AEAQQVLMLNGLRDRVTLRTDGGLRNGRDIAMAAILGAEEFNFGTIALIALGCVYVRQCH 1144 Query: 284 -----GGLASP---FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 G+A+ F + VV S+ E M LG ++ +L +R Sbjct: 1145 LNNCPVGVATTDPKFRSRFKGKPEHVVNFFNSVAHEVRQIMAQLGIAKMNDLIGRPEFLR 1204 Query: 336 HQ 337 + Sbjct: 1205 QR 1206 >gi|33863397|ref|NP_894957.1| inosine 5-monophosphate dehydrogenase [Prochlorococcus marinus str. MIT 9313] gi|33640846|emb|CAE21301.1| putative IMP dehydrogenase [Prochlorococcus marinus str. MIT 9313] Length = 387 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 74/267 (27%), Gaps = 66/267 (24%) Query: 114 APHTVLISNLGAVQLNYDFGVQKAH--QAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFAD 170 I N G + V + + GAD F+ + E I P G Sbjct: 120 YQRIKEIKNQGGIAAVSGTPVAAMRFSKTIAEAGADLFFVQATVVSTEHIGPEGQQTL-- 177 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + L M VP+++ G ++ +++G + G + + Sbjct: 178 ---DLEALCQGMGVPVVM---GNCVTYEVALKLMRAGAAGVMVGIGPGAACT-------- 223 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGAS 282 GIP ++ + +A GG+ G D+ K I GA Sbjct: 224 ----SRGVLGVGIPQATAVADCAAAREDYERESGRYVPIVADGGIITGGDVCKCIACGAD 279 Query: 283 LGGLASPF-----------------------------------LKPAMDSSDAVVAAIES 307 + SP L+ + + + Sbjct: 280 AVMIGSPIARALEAPGRGFHWGMATPSPVLPRGTRIKVGSTGSLERILRGPALLDDGTHN 339 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALI 334 L SM LG + ++E+ +I Sbjct: 340 LLGALKTSMGTLGARTIKEMQQVEVVI 366 >gi|303229380|ref|ZP_07316170.1| GMP reductase [Veillonella atypica ACS-134-V-Col7a] gi|302515916|gb|EFL57868.1| GMP reductase [Veillonella atypica ACS-134-V-Col7a] Length = 328 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 82/279 (29%), Gaps = 46/279 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V+ + P++ M I+ LA + Sbjct: 10 YEDVQLIPNKCIVNSRSECDTHVKLGNRTFKLPVV-------PANMQTIIDEELAEKLAE 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 + F R + L S++ +F V + +A + Sbjct: 63 KG-----YFYIMHRFQPERRLDFVKRMQEKN--LYSSISIGVKEEEFALVDELAKANLIP 115 Query: 145 GADGLFL---HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + H N + ++IQ + + ++ G + + Sbjct: 116 DYITIDIAHGHSNAVIDMIQ---------------YIKKNLPTTFVI--AGNVGTPEAVR 158 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + G + G W + ++ + Sbjct: 159 ELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-PI 207 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 IA GG+R+ DI KSI GA++ + S F + Sbjct: 208 IADGGIRDHGDIAKSIRFGATMVMIGSLFAGHQESPGEE 246 >gi|183597938|ref|ZP_02959431.1| hypothetical protein PROSTU_01285 [Providencia stuartii ATCC 25827] gi|188022708|gb|EDU60748.1| hypothetical protein PROSTU_01285 [Providencia stuartii ATCC 25827] Length = 1487 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ +AG GGT S I S + G+ Sbjct: 997 ISVKLVSEPGVGTIATGVAKAYADLITVAGYDGGTGASPITSV-----KYAGCPWELGLV 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1052 ETQQALVANGLRHKIRLQTDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1111 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG ++ +L T L+ Sbjct: 1112 NNCATGVATQDDSLRQHHYHGLPERVINYFRFIARETRELMAALGVTKLTDLIGRTDLLE 1171 >gi|163739362|ref|ZP_02146773.1| ferredoxin-dependent glutamate synthase [Phaeobacter gallaeciensis BS107] gi|161387432|gb|EDQ11790.1| ferredoxin-dependent glutamate synthase [Phaeobacter gallaeciensis BS107] Length = 497 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 98/309 (31%), Gaps = 60/309 (19%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLL------ISSMTGGNNKMIERINRNLAIAAE 84 ++ A P + D+ +G P + IS M+ G R L+ A+ Sbjct: 111 FVNAAFPALDDDKACCEPRLIGPTARQPYMAPSFFNISGMSYGALSAPAV--RALSHGAK 168 Query: 85 KTKVAMAVG--------------------SQRVMFSDHNAIKSFE-LRQYAP-HTVLISN 122 + + M G + + D N + S + LR+ A V + Sbjct: 169 EAGIWMNTGEGGLSPYHLEGGCDVVFQIGTAKYGVRDENGVLSDDHLRKVASYDAVRMFE 228 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIALLS 179 L Q G V + ++ I PN + A+ L IA + Sbjct: 229 LKLAQ-GAKPGKGGILPGTKVTQQIAEIRGIPEGEDSISPNRHPEIANYDELLDMIAHVR 287 Query: 180 SAMDVPLLLKEV---GCGLSSMDIELGL---KSGIRYFDI-AGRGGTSWSRIE------- 225 P+ +K V L M + + + + G GGT + + Sbjct: 288 EVTGKPVGIKMVVGAEAALREMFLHIAARKDDGAPDFITVDGGEGGTGAAPMPLIDLVGM 347 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 S R+ + + ++G+ + + IASG L N DI ++ GA Sbjct: 348 SVREALPLMCNLRDEYGL------------KDRIRLIASGKLVNPGDIAWALAAGADFVT 395 Query: 286 LASPFLKPA 294 A F+ Sbjct: 396 SARGFMFSL 404 >gi|260436585|ref|ZP_05790555.1| IMP dehydrogenase family protein [Synechococcus sp. WH 8109] gi|260414459|gb|EEX07755.1| IMP dehydrogenase family protein [Synechococcus sp. WH 8109] Length = 387 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 109/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 DIQLGRSKTVRRAYGIDEIALVPGGRTVDPEVT----DTRWSLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N+ L A V + ++S Sbjct: 58 VDVGMAVRLSQLGAIGVLNLEGVQTRYEDPNQVLDRIAA-VGKDEFVPLMQEIYSQPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 +R+ + AV + +A+ GAD F+ Q + + Sbjct: 117 A--LIRKRIQDIKDQGGIAAVS-GTPVAAMRFGKAIAEAGADLFFV-----QATVVSTDH 168 Query: 166 TNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 T A + + L M VP+++ G ++ +++G + G + + Sbjct: 169 TGPAGQETLDLEALCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + +A GG+ G DI K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADYEQESGRYVPIVADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPFLKP-----------------------------------AMDSSDAV 301 I GA + SP + + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGNTGSIERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++E+ ++ Sbjct: 334 DDGTHNLLGCLKTSMGTLGAQTIKEMQQVEVVV 366 >gi|195014641|ref|XP_001984051.1| GH15220 [Drosophila grimshawi] gi|193897533|gb|EDV96399.1| GH15220 [Drosophila grimshawi] Length = 2125 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1085 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1144 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 1145 KN--------AGLPWELGIAETHQVLVLNNLRSRVVVQADGQLRTGFDVVVAALLGADEF 1196 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1197 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRQIM 1256 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1257 ANLGIRKFQDLIGRTDLLR 1275 >gi|224823803|ref|ZP_03696912.1| Glutamate synthase (ferredoxin) [Lutiella nitroferrum 2002] gi|224604258|gb|EEG10432.1| Glutamate synthase (ferredoxin) [Lutiella nitroferrum 2002] Length = 1482 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 39/210 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ V + +K V K+ Sbjct: 964 HSKPGISLISPPPHHDIYSIEDLAQLIFDLKQVNPDALVSVKLVAEPGVGTIAAGVAKAY 1023 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 I+G GGT S + S + G+ + A + GG Sbjct: 1024 ADLITISGYDGGTGASPLTSV-----KYAGTPWELGLSEAQQVLRANGLRGRVRVQTDGG 1078 Query: 267 LRNGVDILKSIILGASLGGLA-SPFL----------------------------KPAMDS 297 L+ G+D++K+ ILGA G P + K + Sbjct: 1079 LKTGLDVVKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQEMKLRSKYFIGL 1138 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + +E M LG + ++EL Sbjct: 1139 PEMVMNYFLFIARETREWMAKLGVRTMEEL 1168 >gi|285019877|ref|YP_003377588.1| glutamate synthase, alpha subunit protein [Xanthomonas albilineans GPE PC73] gi|283475095|emb|CBA17594.1| probable glutamate synthase, alpha subunit protein [Xanthomonas albilineans] Length = 1485 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 39/183 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S + S R W + Sbjct: 1004 VSVKLVSHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVP-------WELG 1056 Query: 245 TPLS--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL---------- 291 S +A GGL+ G+D++K+ ILGA G P + Sbjct: 1057 VAESHQALVANNLRARTILQTDGGLKTGLDVVKAAILGADSFGFGTGPMIVLGCKYLRIC 1116 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + V L +E + LG + + ++ T L Sbjct: 1117 HLNNCATGVATQDERLRANHFVGLPERVENFFRLLAEEVRQWLSYLGVRSLDDIVGRTEL 1176 Query: 334 IRH 336 + Sbjct: 1177 LEQ 1179 >gi|169833329|ref|YP_001694679.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae Hungary19A-6] gi|226739804|sp|B1IC44|GUAC_STRPI RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|168995831|gb|ACA36443.1| guanosine monophosphate reductase [Streptococcus pneumoniae Hungary19A-6] Length = 328 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|88808975|ref|ZP_01124484.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. WH 7805] gi|88786917|gb|EAR18075.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. WH 7805] Length = 387 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 111/393 (28%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ D G + P++ S+M G Sbjct: 2 DIQLGRSKAVRRAYGIDEIALVPGGRTVDPEVT----DTRWILGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N L A K + V + ++S Sbjct: 58 VDVEMAVQLSKLGALGVLNLEGVQTRYEDPNDALDRIASVGKESF-VPLMQELYSKPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNG 164 +R+ + AV + +A+ GAD F+ + + I P G Sbjct: 117 H--LIRKRIQDIKANGGIAAVS-GTPVAAMRFGKAIAEAGADLFFVQATVVSTQHIGPQG 173 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + +L M VP+++ G ++ +++G + G + + Sbjct: 174 QDTL-----DLEVLCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + IA GG+ G DI K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADYERESGRYVPIIADGGIVTGGDICKC 273 Query: 277 IILGASLGGLASPF-----------------------------------LKPAMDSSDAV 301 I GA + SP L+ + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGSTGSLERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++++ +I Sbjct: 334 DDGTHNLLGCLKTSMGTLGAQTIRDMQQVEVVI 366 >gi|301166446|emb|CBW26022.1| putative dioxygenase [Bacteriovorax marinus SJ] Length = 345 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 87/266 (32%), Gaps = 43/266 (16%) Query: 45 DPSVEFLG-KKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVMFSDH 102 D + + K+ P++ + M G IN LA A + +GS Sbjct: 3 DLNTHLMKILKIEKPIIQAPMAG--------INTIELASAVIRAG---GLGSIACAMLTP 51 Query: 103 NAIKS-FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + I+S +E + + N A Q + Q+ + L L+P ++ + Sbjct: 52 DEIRSAYERIKSETSGSINLNFFAHQQREESSEQQ-ERWKERLLPYYQEFGLDPDKKRVS 110 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLL--------------LKEVGCGL--SSMDIELGLK 205 + L + ++ +K G + S+ + L Sbjct: 111 ATRAP----FNDTFCELVEELRPTVVSFHFGLPEPRLLERVKNTGAIILSSATTVSEALW 166 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 R DI GT + D +PT SL A IA+G Sbjct: 167 LEERGCDIIIAQGTQA-------GGHRATFLTDTDEQLPT-NSLISAMRSKITLPIIAAG 218 Query: 266 GLRNGVDILKSIILGASLGGLASPFL 291 G+ + D+ +++ GAS L + FL Sbjct: 219 GIASASDVEQALKSGASAVQLGTAFL 244 >gi|289207450|ref|YP_003459516.1| glutamate synthase (ferredoxin) [Thioalkalivibrio sp. K90mix] gi|288943081|gb|ADC70780.1| Glutamate synthase (ferredoxin) [Thioalkalivibrio sp. K90mix] Length = 1487 Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 39/216 (18%) Query: 154 NPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSGIR 209 NP +I P + + + L+ V + +K V K+ Sbjct: 967 NPGVALISPPPHHDIYSIEDLAQLIFDLKQVNPDALVSVKLVSEAGVGTIAAGVAKAYAD 1026 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 I+G GGT S + S + G+ + ++ + GGL+ Sbjct: 1027 LITISGYDGGTGASPLTSV-----KYAGTPWELGLTETHATLRGNDLRDKVRLQTDGGLK 1081 Query: 269 NGVDILKSIILGASLGGLA-SPFLKPAMDS----------------------------SD 299 G+D++K+ ILGA G P + + Sbjct: 1082 TGLDVIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDKVLRMNHFIGLPE 1141 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V+ + + +E M LG + + +L T L+ Sbjct: 1142 MVMHYFQFVARETREWMAKLGVRSLTDLIGRTDLLE 1177 >gi|22299733|ref|NP_682980.1| inositol-5-monophosphate dehydrogenase [Thermosynechococcus elongatus BP-1] gi|22295917|dbj|BAC09742.1| inosine-5'-monophosphate dehydrogenase [Thermosynechococcus elongatus BP-1] Length = 387 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 73/256 (28%), Gaps = 65/256 (25%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-IQPNGNTNFADLSSKIALLSSA 181 + AV L G + + V GAD LF+ + + P G +A Sbjct: 132 IAAVSLTP-AGASRFGEVVAAAGADLLFVQATVVSPAHLAPEGTD-----PLDLAAFCER 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M +P++L G ++ + G + G + + Sbjct: 186 MPMPVIL---GNCVTYEVALSLMHCGAAAILVGIGPGAACT------------SRGVLGV 230 Query: 242 GIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPF--- 290 G+P ++ + IA GGL G D+ K I GA + SPF Sbjct: 231 GVPQVTAIADCAAARDAYFEETQRYVPVIADGGLVTGGDVCKCIACGADAVMMGSPFARA 290 Query: 291 --------------------------------LKPAMDSSDAVVAAIESLRKEFIVSMFL 318 L+ + + + SM Sbjct: 291 KEAPGRGYHWGMATPSPVLPRGTRIHVGTTGTLEQILRGPAQLDDGTHNFLGALQTSMGT 350 Query: 319 LGTKRVQELYLNTALI 334 LG K ++E+ +I Sbjct: 351 LGAKDLREMQQVEIVI 366 >gi|292654125|ref|YP_003534023.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2] gi|291369777|gb|ADE02005.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2] Length = 362 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 40/264 (15%) Query: 28 DWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 D L+ + P S +VD S +L PL+ ++M + + A A Sbjct: 11 DVLLVPQRSPVDSRSDVDLSTNVTPDLRLDTPLVSAAM--------DTVTE--AELAGTL 60 Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 +G + ++R+ A ++ GAV +N D+ + + + GA Sbjct: 61 SGLGGLGVVHRFLDVDEQAE--QVRRVAEAGGTVA--GAVGINEDY-LDRTEALLDA-GA 114 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 D + + + + + + D ++ G ++ +E ++ Sbjct: 115 DAI----------VMDIAHGHMELCLDAVERIRDEFDPEIVA---GNVVTPAAVEDLWEA 161 Query: 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 G + G+ + E + T +S R + +A GG Sbjct: 162 GAGCVKVGVGPGSHCTTREVAGAGYPQL----------TAVSECAERAHDLGIHVMADGG 211 Query: 267 LRNGVDILKSIILGASLGGLASPF 290 +R D K+++ GA + S F Sbjct: 212 IRTSGDAAKALMAGADTVMMGSFF 235 >gi|126654890|ref|ZP_01726424.1| inositol-5-monophosphate dehydrogenase [Cyanothece sp. CCY0110] gi|126623625|gb|EAZ94329.1| inositol-5-monophosphate dehydrogenase [Cyanothece sp. CCY0110] Length = 387 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 66/396 (16%), Positives = 115/396 (29%), Gaps = 103/396 (26%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSM---- 64 +I+ R D+ L+ R L D G + + P+L S+M Sbjct: 2 DIIIGRGKTARRAYGIDEIALVPGTRTL---DPSLADTRWTIGGIERTIPILASAMDSVV 58 Query: 65 ----TGGNNKMIERINRNLAIAAEKT--------KVAMAVGSQRVMFSDHNAIKSFE--- 109 G +++ NL + ++A S+ V K + Sbjct: 59 DVKMAGLLSELGAIGVLNLEGIQTRYDDPEPILDRIASVGKSEFVGLMQELYAKPIQPEL 118 Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQ 161 ++Q + AV L G + V GAD LF+ HL+P E + Sbjct: 119 IKQRITDIKKNGGIAAVSLTP-AGASQYGNIVAEAGADLLFVQATVVSTAHLSP--ESVT 175 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 P F M +P++ G ++ +K+G + G + Sbjct: 176 PLDLQGF----------CQEMPMPVVF---GNCVTYEVALNLMKAGAAAVLVGIGPGAAC 222 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDI 273 + G+P P ++ ++ +A GG+ G DI Sbjct: 223 T------------SRGVLGVGVPQPTAIADCAAARDDYQQETGRYVPVVADGGIVTGGDI 270 Query: 274 LKSIILGASLGGLASPFLKPAMD------------------------SSDAVVAAI---- 305 K I GA + SP + A + + I Sbjct: 271 CKCIACGADAVMIGSPIARAAEAPGRGYHWGMATPSPVLPRGTRINVGTTGTIEEILTGP 330 Query: 306 -------ESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG K ++ + +I Sbjct: 331 AKLDDGTHNLLGALKTSMGTLGAKDLKGMQDVEVVI 366 >gi|238018811|ref|ZP_04599237.1| hypothetical protein VEIDISOL_00670 [Veillonella dispar ATCC 17748] gi|237864577|gb|EEP65867.1| hypothetical protein VEIDISOL_00670 [Veillonella dispar ATCC 17748] Length = 343 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 82/280 (29%), Gaps = 48/280 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D V+ + P++ M I+ LA A Sbjct: 25 YEDVQLIPNKCIVTSRSECDTHVKLGNRTFRLPVV-------PANMQTIIDEELAEKLAR 77 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV----QKAHQA 140 + + F R L S++ +F + +KA+ Sbjct: 78 EGYF------YIMHRFQPERRMDFVKR--MHDLNLYSSISIGVKPEEFALVDEFKKANLT 129 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + D H N + ++IQ + + ++ G + + Sbjct: 130 PEYITIDIAHGHSNAVIDMIQ---------------YIKKNLPGTFVI--AGNVGTPEAV 172 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + ++ + Sbjct: 173 RELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-P 221 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 IA GG+R+ DI KSI GA++ + S F + Sbjct: 222 IIADGGIRDHGDIAKSIRFGATMVMIGSLFAGHEESPGEE 261 >gi|261856862|ref|YP_003264145.1| glutamate synthase (ferredoxin) [Halothiobacillus neapolitanus c2] gi|261837331|gb|ACX97098.1| Glutamate synthase (ferredoxin) [Halothiobacillus neapolitanus c2] Length = 1486 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 35/182 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + G+ Sbjct: 1001 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSVKYAGSP-----WELGLA 1055 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF------------- 290 A ++ + GGL+ G+D++K+ ILGA G P Sbjct: 1056 EAHQTLRANDLRDKVRLQTDGGLKTGLDVIKAAILGAESFGFGTGPMIALGCKYLRICHL 1115 Query: 291 ---------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L + + V+ + E + LG + + +L T L++ Sbjct: 1116 NNCATGIATQNKVLRLDHFKGNVEKVMNYFRFIAMEVRELLAQLGVRSIDDLISRTDLLK 1175 Query: 336 HQ 337 + Sbjct: 1176 QR 1177 >gi|169629572|ref|YP_001703221.1| glutamate synthase, large subunit [Mycobacterium abscessus ATCC 19977] gi|169241539|emb|CAM62567.1| Glutamate synthase, large subunit [Mycobacterium abscessus] Length = 1762 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1062 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1121 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + G+ A + SG + Sbjct: 1122 VAGNTGGTGAAAVTSLKYAGRS-----AEIGVAEVHQALCANGIRQKVVLRCSGAHQTAS 1176 Query: 272 DILKSIILGAS---LGGLASPFLKPAM--------------------DSSDAVVAAIESL 308 D++KS +LGA G A LK M A+ + ++ Sbjct: 1177 DVVKSALLGADSFEFGTTALMMLKCVMAKNCNIKCPAGLTTNAEVFEGDPRALAQYLLNI 1236 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + ++E + L+ Sbjct: 1237 AHEVREILAALGMRTLREARGRSDLLH 1263 >gi|50292777|ref|XP_448821.1| hypothetical protein [Candida glabrata CBS 138] gi|49528134|emb|CAG61791.1| unnamed protein product [Candida glabrata] Length = 2152 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT + R + + G+ Sbjct: 1092 LVSEVGVGIVASGVA---KAKADHILISGHDGGTG-----ASRWTSIKYAGLPWELGLAE 1143 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS----------------------- 282 + G LR G DI +++LGA Sbjct: 1144 THQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTLATIPLIVMGCVMLRRCHTN 1203 Query: 283 --LGGLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A+ P+L+ + V+ L ++ M LG + + E+ Sbjct: 1204 TCAVGIATQDPYLRSKFKGQPEHVINFFYYLIQDLRQIMARLGFRTIDEM 1253 >gi|225854714|ref|YP_002736226.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae JJA] gi|254800139|sp|C1CEK5|GUAC_STRZJ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|225723377|gb|ACO19230.1| guanosine monophosphate reductase [Streptococcus pneumoniae JJA] Length = 328 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCVKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|111074135|ref|YP_709263.1| inositol-5-monophosphate dehydrogenase [Borrelia afzelii PKo] gi|110891281|gb|ABH02440.1| IMP dehydrogenase [Borrelia afzelii PKo] Length = 403 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 77/321 (23%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM---T-----------GG 67 FDD LI R LP EV + L+ P L S+M T GG Sbjct: 12 FDDVSLIPRKSSILP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 68 ---------------------NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 K + IN N ++TK+ + + K Sbjct: 68 IGIIHKNMSIEAQKKEIEKVKTYKAQKTINTNKVTNEQETKML-----TKQYLEEPEIHK 122 Query: 107 SFELRQYAPHTVLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + E ++ + N V + + ++ A + ++ Sbjct: 123 NTEHKEDFSNACKDLNSKLRVGAAISIDIDTIERVEELVKAHVDLIVIDSA--------- 173 Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 S++I L + P L G ++ + +G + G+ + Sbjct: 174 ---HGHSTRIIELVKTIKNKYPNLDLIAGNIVTKEAALDLINAGADCLKVGIGPGSICTT 230 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGA 281 + G+P ++ C IA GG+R D++K+I GA Sbjct: 231 ------------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGA 278 Query: 282 SLGGLASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 279 DSVMIGNLFAGAKESPSEEII 299 >gi|255307083|ref|ZP_05351254.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile ATCC 43255] Length = 361 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 70/312 (22%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---------EKTKVA--MAVGSQRV 97 FLGK+L PL+I S + +I + A A M + Sbjct: 3 NFLGKELKSPLIIGSGPLTYSAAGCKILSDAGAGAVVTKTIRKERAINPAPHMVRNTANA 62 Query: 98 MFSD-------HNAIKSFELRQYAPHTVL-ISNLGAVQLNYDFGVQKAHQAVHVL---GA 146 + ++ FE+ Q + I+++G ++++ + V + GA Sbjct: 63 LLNNEKWTDFEPEQWIDFEIPQMKRDGTVCIASIG-------HTIEESSELVEKVANAGA 115 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLK 205 D + E++ + ++ DL I +++P+++K D + + Sbjct: 116 DFI--------ELV----SYDYRDLIPMIKDAKERVNIPVIVKLPPMIDEIGDFAKKLEE 163 Query: 206 SGIRYFDIAGRGGTSWSRI-ESHRDLESDIGIVFQDWGI----------PTPLSLEMARP 254 +G T+ + + R + GI T + + Sbjct: 164 AGADAI-------TACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQRIYEIKK 216 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGL-ASPFLKPAMDSSDAVVAAIESLRKEFI 313 I GG +G D L+ I+ GA G+ + LK A I + + Sbjct: 217 -QVNIPIIGLGGCVSGDDALEMIMAGADFVGICSVVILKGA--------QVISKIHDDLK 267 Query: 314 VSMFLLGTKRVQ 325 ++ LG ++ Sbjct: 268 SNLNRLGYNTIE 279 >gi|219722993|ref|YP_002474383.1| inosine-5'-monophosphate dehydrogenase [Borrelia garinii Far04] gi|219694681|gb|ACL35199.1| inosine-5'-monophosphate dehydrogenase [Borrelia garinii Far04] Length = 404 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 102/324 (31%), Gaps = 82/324 (25%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM---T-----------GG 67 FDD LI R LP EV + L+ P L S+M T GG Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 68 ---------------------NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 K+ + IN N I + TK+ + ++ + K Sbjct: 68 IGIIHKNMSIEAQKKEIEKVKTYKVQKTININKDINEQTTKILL----EKQHLKESEIYK 123 Query: 107 SFELRQYAPHTVLISN----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 + EL++ + N +GA +++ + V H++ L Sbjct: 124 NAELKEDFSNACKDLNSRLRVGAAVSIDIDTLERVEELVKA--------HVDLL------ 169 Query: 163 NGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + S++I L + P L G ++ + G + G+ Sbjct: 170 -VIDSAHGHSTRIIELVKTIKTKYPSLDLIAGNIVTKEAALDLINVGADCLKVGIGPGSI 228 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSII 278 + + G+P ++ C IA GG+R D++K+I Sbjct: 229 CTT------------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIA 276 Query: 279 LGASLGGLASPFLKPAMDSSDAVV 302 GA + + F S+ ++ Sbjct: 277 AGADSVMIGNLFAGAKESPSEEII 300 >gi|299541852|ref|ZP_07052175.1| guanosine 5'-monophosphate oxidoreductase [Lysinibacillus fusiformis ZC1] gi|298725590|gb|EFI66231.1| guanosine 5'-monophosphate oxidoreductase [Lysinibacillus fusiformis ZC1] Length = 327 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 92/278 (33%), Gaps = 40/278 (14%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + E S E D SV G P++ M I+ NLA Sbjct: 7 YEDIQLIPAKCIVE-SRSECDTSVTLGGHTFKLPVV-------PANMQTIIDENLAK--- 55 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K+A + ++F L LI+++ ++ + A +++ Sbjct: 56 --KLAENGYFYIMHRFQPETRRNFIL--EMQGNGLIASISVGVKEEEYTFIEELAAANLV 111 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + +G++N + I + + ++ G + + Sbjct: 112 -PDFITIDI--------AHGHSNA--VIRMIQHIKKHLPKSFVI--AGNVGTPEAVRELE 158 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 159 NAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAATK-PIIAD 207 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 GG+R DI KS+ GAS+ + S F + + Sbjct: 208 GGIRTHGDIAKSVRFGASMVMIGSLFAGHEESPGETIE 245 >gi|149181976|ref|ZP_01860463.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. SG-1] gi|148850321|gb|EDL64484.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. SG-1] Length = 327 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 44/281 (15%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + E S E D ++ G P++ M I+ +A+ Sbjct: 7 YEDIQLIPAKCIVE-SRSECDTTITLGGHTFKLPVV-------PANMQTIIDEKIAV--- 55 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV--H 142 +A + F +A + ++G + Y F Q A + V Sbjct: 56 --YLAENGYFYIMHRFQPEKRLDFIRDMHAKELIASISVGVKEEEYKFVEQLASEGVIPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + S + ++ G + + Sbjct: 114 FITIDIAHGHSNA---------------VINMIKHIKSHLPASFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R DI KSI GAS+ + S F + V Sbjct: 206 ADGGIRTHGDIAKSIRFGASMVMVGSLFAGHEESPGETVER 246 >gi|282850597|ref|ZP_06259976.1| GMP reductase [Veillonella parvula ATCC 17745] gi|294792226|ref|ZP_06757374.1| GMP reductase [Veillonella sp. 6_1_27] gi|294794087|ref|ZP_06759224.1| GMP reductase [Veillonella sp. 3_1_44] gi|282580090|gb|EFB85494.1| GMP reductase [Veillonella parvula ATCC 17745] gi|294455657|gb|EFG24029.1| GMP reductase [Veillonella sp. 3_1_44] gi|294457456|gb|EFG25818.1| GMP reductase [Veillonella sp. 6_1_27] Length = 328 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 82/280 (29%), Gaps = 48/280 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D V+ + P++ M I+ LA A Sbjct: 10 YEDVQLIPNKCIVSSRSECDTHVKLGKRTFRLPVV-------PANMQTIIDEELAEKLAR 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV----QKAHQA 140 + + F R L S++ +F + +KA+ Sbjct: 63 EGYF------YIMHRFQPERRMDFVKR--MHDLNLYSSISIGVKAEEFALVDEFKKANLT 114 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + D H N + E+IQ + + ++ G + + Sbjct: 115 PEYITIDIAHGHSNAVIEMIQ---------------YIKKNLPETFII--AGNVGTPEAV 157 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + ++ + Sbjct: 158 RELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-P 206 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 IA GG+R+ DI KSI GA++ + S F + Sbjct: 207 IIADGGIRDHGDIAKSIRFGATMVMIGSLFAGHEESPGEE 246 >gi|166368226|ref|YP_001660499.1| inosine 5-monophosphate dehydrogenase [Microcystis aeruginosa NIES-843] gi|166090599|dbj|BAG05307.1| inosine-5'-monophosphate dehydrogenase [Microcystis aeruginosa NIES-843] Length = 387 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 108/382 (28%), Gaps = 103/382 (26%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------------------ 66 D+ L+ + + D + P++ S+M G Sbjct: 16 GIDEIALVP-GVRTLDPSLADTRWSLGNIEREIPIIASAMDGVVDTKMAVLLSELGALGV 74 Query: 67 ----GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR--QYAPHTVLI 120 G E N L A VG + ++++ + ELR + + Sbjct: 75 LNLEGIQTRYEDPNPILDRI-TAVGKAEFVGLMQELYAEPIKPQLIELRIQEIQEKGGIA 133 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFL---HLNPLQEIIQPNGNTNFADLSSKIAL 177 + +G A A +L + HL+P E I P + Sbjct: 134 AVSLTPAGAVKYGAIVAQAAADILFVQATVVSTAHLSP--EAITPLD----------LVQ 181 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESH 227 L M +P++L G ++ +K+G + G G G + + Sbjct: 182 LCQEMPIPVVL---GNCVTYEVALNLMKTGAAGVLVGIGPGAACTSRGVLGVGVPQATAV 238 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D + FQ+ G IA GG+ G DI K I GA + Sbjct: 239 ADCAAARDDFFQETG--------------KYVPVIADGGIITGGDICKCIACGADAVMIG 284 Query: 288 SPFLKPAMD------------------------SSDAVVAAI-----------ESLRKEF 312 SP + S +A I +L Sbjct: 285 SPIARSVEAPGRGFHWGMATPSPVLPRGTRISVGSTGTIAEILVGPAKLDDGTHNLLGAL 344 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 345 KTSMGTLGAKNLKEMQQVEVVI 366 >gi|301801896|emb|CBW34620.1| GMP reductase [Streptococcus pneumoniae INV200] Length = 328 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 102/347 (29%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P+++++M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVVLANM-------QTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEVGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKVARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|307546343|ref|YP_003898822.1| glutamate synthase (NADPH), large subunit [Halomonas elongata DSM 2581] gi|307218367|emb|CBV43637.1| glutamate synthase (NADPH), large subunit [Halomonas elongata DSM 2581] Length = 1482 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 35/183 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ ++G GGT+ S + S + S + Sbjct: 993 DAQVSVKLVSEPGIGTIATGVAKAYADLITVSGYDGGTAASPLTSIKHAGSP-----WEL 1047 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL--------- 291 G+P ++ + GGL+ G+D++K+ ILGA G +P + Sbjct: 1048 GLPEVHQALRINGLRDKIRLQTDGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRI 1107 Query: 292 -------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + D V + +E M +LG +++ +L T Sbjct: 1108 CHLNNCATGVATQHQVLRDEHFRGTVDMVKHYFRFIAEEVRELMAMLGVRQLTDLIGRTD 1167 Query: 333 LIR 335 L+ Sbjct: 1168 LLE 1170 >gi|154175518|ref|YP_001407770.1| inosine 5'-monophosphate dehydrogenase [Campylobacter curvus 525.92] gi|112802503|gb|EAT99847.1| inosine-5'-monophosphate dehydrogenase [Campylobacter curvus 525.92] Length = 482 Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 67/194 (34%), Gaps = 27/194 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ S G +++ GV + + ++ A + + + + + Sbjct: 202 RKEYPNANKDS-YGRLRVAAAVGVGQLDRVKALVEAGADVI--------VMDSAHGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + S +V ++ VG + ++ +G + G+ + Sbjct: 253 IIDTLKEIKSKFNVDVV---VGNIANPAAVKDLADAGADGIKVGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P +++ A GGL+ DI K++ GAS +A Sbjct: 303 -----RIVAGVGVPQISAIDDCSSEAAKFGIPVTADGGLKYSGDIAKALAAGASCV-MAG 356 Query: 289 PFLKPAMDSSDAVV 302 L +S V+ Sbjct: 357 SLLAGCEESPGEVI 370 >gi|34499493|ref|NP_903708.1| glutamate synthase subunit alpha [Chromobacterium violaceum ATCC 12472] gi|34105343|gb|AAQ61698.1| glutamate synthase, large subunit [Chromobacterium violaceum ATCC 12472] Length = 1482 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + G+ Sbjct: 1002 VSVKLVAEPGVGTVAAGVAKAYADLITISGYDGGTGASPLTSVKYAGSP-----WELGLS 1056 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A + GGL+ G+D++K+ ILGA G P + Sbjct: 1057 EAQQVLRANGLRGRVRVQTDGGLKTGLDVVKAAILGAESFGFGTGPMVALGCKYLRICHL 1116 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K D VV + +E M LG + ++EL Sbjct: 1117 NNCATGVATQEIKLRSKYFTGLPDMVVNYFLFIARETREWMAKLGVRSMEEL 1168 >gi|283850322|ref|ZP_06367611.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B] gi|283574348|gb|EFC22319.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B] Length = 485 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 74/260 (28%), Gaps = 76/260 (29%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLL 187 G + +A +L A FL L+ + + ++ I + D L+ Sbjct: 221 AIGVGADRDERAASLLEAGADFLVLDSA--------HGHSRNILEAIQAIKGNFPDCQLI 272 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 VG + + + +G + G+ + V G+P Sbjct: 273 GGNVG---TYEGAKALIAAGADAVKVGIGPGSICTT------------RVVAGVGVPQVT 317 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF--------------- 290 ++ A C EA + IA GG++ DI+K+I G + F Sbjct: 318 AIMEAARACREAGKRLIADGGVKFSGDIVKAIAAGGDTVMMGGLFAGTEESPGETVLYQG 377 Query: 291 ----LKPAMDSSDA-------------------------------VVAAIESLRKEFIVS 315 + M S DA V +I L Sbjct: 378 RTYKIYRGMGSIDAMREGSSDRYFQEKSKKLVPEGIVGRVPFKGPVTESIYQLVGGLRSG 437 Query: 316 MFLLGTKRVQELYLNTALIR 335 M G + +L T +R Sbjct: 438 MGYCGCATIGDLQQKTRFVR 457 >gi|308172545|ref|YP_003919250.1| flavoenzyme [Bacillus amyloliquefaciens DSM 7] gi|307605409|emb|CBI41780.1| putative flavoenzyme [Bacillus amyloliquefaciens DSM 7] gi|328552309|gb|AEB22801.1| flavoenzyme [Bacillus amyloliquefaciens TA208] gi|328910653|gb|AEB62249.1| putative flavoenzyme [Bacillus amyloliquefaciens LL3] Length = 526 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + + + A +L G + + V ++ P Q I PN F Sbjct: 248 EEFKKKSRLEQIKAFELKLAQGAKARGGHIDGSKVTEEIAAIRNVQPGQSIDSPNRFNEF 307 Query: 169 ADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK------SGIRYFDIAGR-GG 218 +++ I L + + P+ +K V S D+E + + I G GG Sbjct: 308 SNVPDMLDFIEELRTVGEKPVGIKIVPG--SRKDLEDLISRMSSSGKLPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I G+P L ++ + ASG L I ++ Sbjct: 366 TGASFHELADSVGLPIMT-----GLPLVDGLLKTYGIRDKLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|154685154|ref|YP_001420315.1| YerD [Bacillus amyloliquefaciens FZB42] gi|154351005|gb|ABS73084.1| YerD [Bacillus amyloliquefaciens FZB42] Length = 524 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + + + A +L G + + V ++ P Q I PN F Sbjct: 248 EEFKKKSRLEQIKAFELKLAQGAKARGGHIDGSKVTEEIAAIRNVQPGQSIDSPNRFNEF 307 Query: 169 ADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGLKSG------IRYFDIAGR-GG 218 +++ + + V P+ +K V S D+E + + I G GG Sbjct: 308 SNVPDMLDFIEKLRTVGEKPVGIKIVPG--SRKDLEDLISCMSSSGKLPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I G+P L ++ + ASG L I ++ Sbjct: 366 TGASFHELADSVGLPILT-----GLPLVDGLLKTYGIRDKLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|26553769|ref|NP_757703.1| inosine-5'-monophosphate dehydrogenase [Mycoplasma penetrans HF-2] gi|26453776|dbj|BAC44107.1| inosine-5'-monophosphate dehydrogenase [Mycoplasma penetrans HF-2] Length = 483 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 45/145 (31%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF----------------- 238 S +L + +G+ I G S IE R+++ +F Sbjct: 232 SIERAKLLIAAGVDAIIIDCAHGHSKKVIELTREIKKLFPKLFLIVGNVVTANGVNDLYK 291 Query: 239 ---------------------QDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILK 275 GIP ++ IA GG++N D++K Sbjct: 292 AGADAVKIGVGPGAICTTRTVSGVGIPQFSAILECYEEAKKLNIPIIADGGIKNSGDMVK 351 Query: 276 SIILGASLGGLASPFLKPAMDSSDA 300 ++ GA L + D Sbjct: 352 ALAAGADAV-----MLGSLLAGCDE 371 >gi|307150642|ref|YP_003886026.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 7822] gi|306980870|gb|ADN12751.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 7822] Length = 387 Score = 55.6 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 110/383 (28%), Gaps = 105/383 (27%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------------------ 66 D+ L+ + + D G + P++ S+M G Sbjct: 16 GIDEIALVP-GVRTLDPSLADTRFSIGGIEREIPIIASAMDGVVDVRMAVLLSELGALGV 74 Query: 67 ----GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 G N L A + VG + ++++ IK ++Q Sbjct: 75 LNLEGIQTRYADPNPILDRIA-SVGKSEFVGLMQELYAEP--IKPELIKQRISEIKQQGG 131 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSK 174 + AV L G + V + AD +F+ HL+P I P F+ Sbjct: 132 IAAVSLTP-AGAYSFGEVVALAKADLVFVQATVVSTDHLSPAS--INPLDLAQFS----- 183 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 M +P++L G ++ +K+G + G + + Sbjct: 184 -----QNMPMPVIL---GNCVTYEVTLELMKAGAAGILVGIGPGAACT------------ 223 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGL 286 GIP ++ + IA GG+ G DI K I GA + Sbjct: 224 SRGVLGVGIPQATAVADCAAAREDYYQETGRYVPVIADGGIITGGDICKCIACGADAVMI 283 Query: 287 ASPFLKPAMD------------------------SSDAVVAAI-----------ESLRKE 311 SP + A + + I +L Sbjct: 284 GSPIARSAEAPGRGFHWGMATPSPVLPRGTRINVGTTGTIQEILRGPAKLDDGTHNLLGA 343 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 344 LKTSMGTLGAKDIKEMQQVEVVI 366 >gi|296208611|ref|XP_002751145.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Callithrix jacchus] Length = 974 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 102/322 (31%), Gaps = 65/322 (20%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 D VD SVE G K P ++S T + I R A + A+ + Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATS--TSMIRR-----AFEVGWGFALTKTFSLDK 580 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH----QAVHVLGADGLFLHLNPL 156 D S + + + + LN + +K Q+V+ L AD P Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVNELKADF------PD 634 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYF---- 211 + P N + A+ +P K + I + G Sbjct: 635 ND---PELVRNICRW------VRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATN 685 Query: 212 DIAG-----RGGTSWSRIESHRDLESDIGIVFQDWGIP-TPL------SLEMARPYCNEA 259 ++G GT W + + G+ T + ++ Sbjct: 686 TVSGLMGLKSDGTPWPAVGIAKRTTYG--------GVSGTAIRPIALRAVTSIARALPGF 737 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 +A+GG+ + L+ + GAS+ + A+ + D V IE ++L Sbjct: 738 PILATGGIDSAESALQFLHSGASVLQVC-----SAIQNQDFTV--IEDYCTGLKAMLYL- 789 Query: 320 GTKRVQELY----LNTALIRHQ 337 K ++EL + A + HQ Sbjct: 790 --KSIEELQDWDGQSPATVSHQ 809 >gi|254562441|ref|YP_003069536.1| glutamate synthase, large subunit [Methylobacterium extorquens DM4] gi|254269719|emb|CAX25691.1| glutamate synthase, large subunit [Methylobacterium extorquens DM4] Length = 1572 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT + + S + + Sbjct: 1060 VSVKLVSEVGVGTVAAGVAKARADHITISGFDGGTGAAPLTSIKHAGGPWETGLAE---- 1115 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L M A GG+R G D++ +++LGA G ++ L A Sbjct: 1116 TQQTLVM-NGLRGRVALQADGGIRTGKDVMIAVLLGADQIGFSTAPLIAAGCIMMRKCHL 1174 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + +E M +G ++++L + L+ Sbjct: 1175 NTCPVGVATQDPVLRKRFKGTPEHVINYFFFVAEELRELMAAMGFTKLEDLIGRSDLLDK 1234 Query: 337 Q 337 + Sbjct: 1235 R 1235 >gi|323339773|ref|ZP_08080043.1| GMP reductase [Lactobacillus ruminis ATCC 25644] gi|323092852|gb|EFZ35454.1| GMP reductase [Lactobacillus ruminis ATCC 25644] Length = 325 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 95/286 (33%), Gaps = 42/286 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D L+ S E+D ++F + P++ M I+ LA+ A+ Sbjct: 6 YEDIQLVPNKCIVKSRSEIDTRIKFGPMTFNIPVV-------PANMQTVIDEKLAVWLAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D + F +++ + ++ ++ H+ + L Sbjct: 59 NGYF------YIMHRFDEDERLPF-VKKMHDQGLF------ASISVGVKPKE-HELIDEL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 A N + E I + +D + I + AM ++ G + + Sbjct: 105 AAQ------NLVPEYITIDIAHGHSDTVIEMIKHIKQAMPGVFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + ++ + ++ IA Sbjct: 157 ENAGADATKVGIGPGKACIT-------KLKTGFGTGGWQL---AAVRLCAKAASK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 GG+RN DI KS+ GAS+ + S F + V + + Sbjct: 206 DGGIRNNGDIAKSVRFGASMVMIGSMFAGHEETPGEVVEQDGQKYK 251 >gi|218531522|ref|YP_002422338.1| glutamate synthase (ferredoxin) [Methylobacterium chloromethanicum CM4] gi|218523825|gb|ACK84410.1| Glutamate synthase (ferredoxin) [Methylobacterium chloromethanicum CM4] Length = 1572 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT + + S + + Sbjct: 1060 VSVKLVSEVGVGTVAAGVAKARADHITISGFDGGTGAAPLTSIKHAGGPWETGLAE---- 1115 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L M A GG+R G D++ +++LGA G ++ L A Sbjct: 1116 TQQTLVM-NGLRGRVALQADGGIRTGKDVMIAVLLGADQIGFSTAPLIAAGCIMMRKCHL 1174 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + +E M +G ++++L + L+ Sbjct: 1175 NTCPVGVATQDPVLRKRFKGTPEHVINYFFFVAEELRELMAAMGFTKLEDLIGRSDLLDK 1234 Query: 337 Q 337 + Sbjct: 1235 R 1235 >gi|163852681|ref|YP_001640724.1| glutamate synthase (ferredoxin) [Methylobacterium extorquens PA1] gi|163664286|gb|ABY31653.1| Glutamate synthase (ferredoxin) [Methylobacterium extorquens PA1] Length = 1572 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT + + S + + Sbjct: 1060 VSVKLVSEVGVGTVAAGVAKARADHITISGFDGGTGAAPLTSIKHAGGPWETGLAE---- 1115 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L M A GG+R G D++ +++LGA G ++ L A Sbjct: 1116 TQQTLVM-NGLRGRVALQADGGIRTGKDVMIAVLLGADQIGFSTAPLIAAGCIMMRKCHL 1174 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + +E M +G ++++L + L+ Sbjct: 1175 NTCPVGVATQDPVLRKRFKGTPEHVINYFFFVAEELRELMAAMGFTKLEDLIGRSDLLDK 1234 Query: 337 Q 337 + Sbjct: 1235 R 1235 >gi|291519078|emb|CBK74299.1| Glutamate synthase domain 2 [Butyrivibrio fibrisolvens 16/4] Length = 956 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 64/195 (32%), Gaps = 33/195 (16%) Query: 170 DLSSKIALLSSA-MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DL+ I L +A D + +K V K+G + I+G G + + +S Sbjct: 441 DLAELIYDLKNANKDARISVKLVSEAGVGTIASGVAKAGAQVILISGYDGGTGAAPKSSI 500 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + G+ M N+ G L +G D+ + LGA G A+ Sbjct: 501 ----HNAGLPWELGLAEAHQTLMMNGLRNKVVIETDGKLMSGRDVAIACALGAEEFGFAT 556 Query: 289 PFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 L K + VV + + +E M LG Sbjct: 557 APLVTMGCVMMRVCNLDTCPVGVATQNPELRKRFSGKPEYVVNFMRFIAEELREYMAQLG 616 Query: 321 TKRVQELYLNTALIR 335 K V EL T L++ Sbjct: 617 CKTVDELCGRTDLLK 631 >gi|312198962|ref|YP_004019023.1| ferredoxin-dependent glutamate synthase [Frankia sp. EuI1c] gi|311230298|gb|ADP83153.1| ferredoxin-dependent glutamate synthase [Frankia sp. EuI1c] Length = 467 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 242 GIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 GIPT ++ A E Q + SGG+R G D+ K++ LGA + + L Sbjct: 299 GIPTLAAIPQAVQALRELGLHRKVQLVVSGGIRTGADVAKAMALGADAVAIGTAALIAL 357 >gi|240140014|ref|YP_002964491.1| glutamate synthase, large subunit [Methylobacterium extorquens AM1] gi|240009988|gb|ACS41214.1| glutamate synthase, large subunit [Methylobacterium extorquens AM1] Length = 1560 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT + + S + + Sbjct: 1048 VSVKLVSEVGVGTVAAGVAKARADHITISGFDGGTGAAPLTSIKHAGGPWETGLAE---- 1103 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L M A GG+R G D++ +++LGA G ++ L A Sbjct: 1104 TQQTLVM-NGLRGRVALQADGGIRTGKDVMIAVLLGADQIGFSTAPLIAAGCIMMRKCHL 1162 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + +E M +G ++++L + L+ Sbjct: 1163 NTCPVGVATQDPVLRKRFKGTPEHVINYFFFVAEELRELMAAMGFTKLEDLIGRSDLLDK 1222 Query: 337 Q 337 + Sbjct: 1223 R 1223 >gi|195495005|ref|XP_002095083.1| GE22188 [Drosophila yakuba] gi|194181184|gb|EDW94795.1| GE22188 [Drosophila yakuba] Length = 2116 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1081 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1140 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1141 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1192 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1193 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 1252 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1253 AGLGIRKFQDLIGRTDLLR 1271 >gi|16330504|ref|NP_441232.1| inosine 5-monophosphate dehydrogenase [Synechocystis sp. PCC 6803] gi|1652995|dbj|BAA17912.1| IMP dehydrogenase subunit [Synechocystis sp. PCC 6803] Length = 387 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 112/376 (29%), Gaps = 91/376 (24%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------------------ 66 D+ L+ + + D + + P++ S+M G Sbjct: 16 GIDEIALVP-GVRTLDPALADTRWKVGAIEREIPIIASAMDGVVDSRMAVLLSELGALGV 74 Query: 67 ----GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 G E N L A K VG + ++++ IK + + Sbjct: 75 VNLEGIQTRYEDPNPILDRIASVGKTEF-VGLMQELYAEP--IKPELITKRIQEIQAAGG 131 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSA 181 + AV L G K V GAD LF+ Q + + + + S + L Sbjct: 132 IAAVSLTP-VGASKYASTVAEAGADLLFI-----QATVVSTAHLSPESVESLDLVKLCQE 185 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 M +P++L G ++ +++G + G + + Sbjct: 186 MPMPVVL---GNCVTYEVSLELMRAGAAAVLVGIGPGAACT------------SRGVLGV 230 Query: 242 GIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 G+P P ++ ++ IA GG+ G DI K I GA + SP + Sbjct: 231 GVPQPTAIADCAAARDDYLQETGRYVPVIADGGIITGGDICKCIACGADAVMIGSPIARA 290 Query: 294 AMD------------------------SSDAVVAAI-----------ESLRKEFIVSMFL 318 A + + I +L SM Sbjct: 291 AEAPGRGFHWGMATPSPVLPRGTRINVGTTGTIREILVGPAKLDDGTHNLLGAIKTSMGT 350 Query: 319 LGTKRVQELYLNTALI 334 LG K ++E+ +I Sbjct: 351 LGAKDMKEMQQVDVVI 366 >gi|194750616|ref|XP_001957626.1| GF10502 [Drosophila ananassae] gi|190624908|gb|EDV40432.1| GF10502 [Drosophila ananassae] Length = 2125 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1089 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1148 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1149 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1200 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1201 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRKIM 1260 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1261 AGLGIRKFQDLIGRTDLLR 1279 >gi|297566122|ref|YP_003685094.1| glutamate synthase [Meiothermus silvanus DSM 9946] gi|296850571|gb|ADH63586.1| Glutamate synthase (ferredoxin) [Meiothermus silvanus DSM 9946] Length = 1518 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 101/314 (32%), Gaps = 52/314 (16%) Query: 11 NIVCKDPGIDRNKKFFDDWH-----LIHRA-----------LPE---ISFDEVDPSVEFL 51 I + ++ + L H + PE ++ +EVD V Sbjct: 803 RIYKTALDVAAGIAPYEHYQEKVRGLEHESPIAARQLLAVRFPEKSTVAPEEVDIGV--G 860 Query: 52 GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSD 101 G S P +I++M+ G+ R AA+K + +G Sbjct: 861 GH--SLPFVITAMSFGSQGETAF--RAYVEAAKKLNMLCINGEGGEIPDMLGKYTHWRGQ 916 Query: 102 HNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI 159 A F Y +V+ +G + G + + A + P ++ Sbjct: 917 QVASGRFGAHAYMLNSASVIEIKIGQGAKPGEGGHLPGKKVTPKVAAARNAV---PGVDL 973 Query: 160 IQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 I P+ N + + +A L + + +K K+G ++ Sbjct: 974 ISPSNNHDLYSIED-LAQLVEELKTINPKAKVSVKVPVIPGIGTIAVGIAKAGADIIALS 1032 Query: 215 G-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 G GGT + R + + G+ + ++ + A GGL+ D+ Sbjct: 1033 GFEGGTG-----AARWHALKYAGMPVEIGVRRAHRALVRAGMRDKVEIWADGGLKTAYDV 1087 Query: 274 LKSIILGASLGGLA 287 L+ +LGA G+A Sbjct: 1088 LRMALLGADRVGMA 1101 Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 16/91 (17%) Query: 248 SLEMARPYCN------EAQFIASGGLRNGVDILKSIILGASLGGLASPFL----KPAMDS 297 SLE AR + + SGG+RN D+ + LGA P+L A+ Sbjct: 655 SLEEARDLEGISLRRRTSIVVHSGGVRNLHDLAVCLGLGADAVA---PWLMQQKALALGG 711 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 S+A+ +E L+K + +G + EL Sbjct: 712 SEALQKLVEGLKKGLEKVISTMG---IHELR 739 >gi|225570539|ref|ZP_03779564.1| hypothetical protein CLOHYLEM_06641 [Clostridium hylemonae DSM 15053] gi|225160736|gb|EEG73355.1| hypothetical protein CLOHYLEM_06641 [Clostridium hylemonae DSM 15053] Length = 445 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 47/285 (16%) Query: 25 FFDDW-----HLIHRALPEISFDEVDPSVEFLGKK------LSFPLLISSMTGGNNKMIE 73 FD+ L L + ++V+ GK L P+ +S M+ G Sbjct: 81 GFDEILVLGAQLNPPPLD--AGEDVNIRTVI-GKHAKKPMVLEGPMYVSHMSFGALSREA 137 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--------------ELRQYAPHTVL 119 + +LA + AM G ++ + A + LR+ + Sbjct: 138 K--TSLARGSALAGTAMCSGEGGILPEEKAAAYKYIFEYVPNRYSVTPENLREADAVEIK 195 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 I + K + + + L + + + +L ++ + Sbjct: 196 IGQGTKPGMGGHLPGDKVTEEIARVRNKPLGKDVISPSKFEDISTKEELKELVWQLR--A 253 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 S+ P+ +K + G D+E + + + I GRGG + + RD S Sbjct: 254 SSQGRPIGIK-IAAGRIEKDLEYCVFAQPDFITIDGRGGATGASPRIIRDSTS------- 305 Query: 240 DWGIPTPLSLEMARPYCN----EAQFIASGGLRNGVDILKSIILG 280 +P +L A+ Y + I +GG R D +K+I +G Sbjct: 306 ---VPAVYALHRAKKYLEASGADIDLIMTGGFRVSADAVKAIAMG 347 >gi|217073286|gb|ACJ85002.1| unknown [Medicago truncatula] Length = 224 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + N+ F R L I ++D S LG K+S P++I+ Sbjct: 30 AEDQWTLQENRNAFSRILFRPRIL--IDVSKIDLSTTVLGFKISMPIMIAPTA 80 >gi|227877951|ref|ZP_03995956.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus JV-V01] gi|256849263|ref|ZP_05554696.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus MV-1A-US] gi|312978344|ref|ZP_07790086.1| inosine-5`-monophosphate dehydrogenase [Lactobacillus crispatus CTV-05] gi|227862454|gb|EEJ69968.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus JV-V01] gi|256714039|gb|EEU29027.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus MV-1A-US] gi|310894687|gb|EFQ43759.1| inosine-5`-monophosphate dehydrogenase [Lactobacillus crispatus CTV-05] Length = 381 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 85/270 (31%), Gaps = 45/270 (16%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +EVD S KL+ PL IS+ G + + E +AI Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTTLADNIKLNIPL-ISA---GMDTVTE---GAMAI 63 Query: 82 A-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQLNYDFGVQKA 137 A A + + + + + + A N Sbjct: 64 AMALQGGLGVVHKNMSIQAQAGEVANVKSVVVPTSAAKAATDDQNHLLCAAAVGVTSDTF 123 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLS 196 +A +L A + ++ + + A + KI + L+ V G Sbjct: 124 ERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPEATLIAGNVATG-- 173 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +G+ + G+ + V G+P ++ A Sbjct: 174 -DATRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAATAA 220 Query: 257 NEA--QFIASGGLRNGVDILKSIILGASLG 284 E IA GG++ D++K++ G + Sbjct: 221 REYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|296876529|ref|ZP_06900580.1| GMP reductase [Streptococcus parasanguinis ATCC 15912] gi|296432522|gb|EFH18318.1| GMP reductase [Streptococcus parasanguinis ATCC 15912] Length = 344 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 103/347 (29%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V+F P++ M ++ N+A Sbjct: 27 YEDIQLIPNKCIINSRSEADTTVQFGKHTFKLPVV-------PANMQTILDENVAE---- 75 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G + YDF Q A + Sbjct: 76 -QLARGGYFYIMHRFDEAGRIPFVKRMHEQGLIASISVGVKEYEYDFVSQLKADAPEYIT 134 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + +IQ + + ++ G + + Sbjct: 135 IDIAHGHADSVIRMIQ---------------HIKKELPDTFVI--AGNVGTPEAVRELEN 177 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 178 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCSKAARK-PIIADG 226 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 227 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEIDGDSFKEYYGSASEYQKGAYKN 286 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ S+ G +++ +L +I Sbjct: 287 VEGKKILLPAKGHLQDTLTEMEQDLQSSISYAGGRKLADLKHVDYVI 333 >gi|90579808|ref|ZP_01235616.1| inositol-5-monophosphate dehydrogenase [Vibrio angustum S14] gi|90438693|gb|EAS63876.1| inositol-5-monophosphate dehydrogenase [Vibrio angustum S14] Length = 487 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I +A ++P++ V ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRAAFPNLPIVGGNVA---TAEGARALIEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A ++ IA GG+R D+ K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAISEAASVADQYGIPVIADGGIRYSGDMCKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVELYQGRSYKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VA---AIESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + SM L G+ +++L +R Sbjct: 421 VAYKGYLKEIVHQQMGGLRSSMGLTGSATIEDLRTKAEFVR 461 >gi|262047278|ref|ZP_06020236.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus MV-3A-US] gi|293381490|ref|ZP_06627485.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus 214-1] gi|295692064|ref|YP_003600674.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus ST1] gi|260572523|gb|EEX29085.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus MV-3A-US] gi|290921960|gb|EFD98967.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus 214-1] gi|295030170|emb|CBL49649.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus crispatus ST1] Length = 380 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 45/280 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S KL+ PL IS+ G + + Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTTLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + A N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQAGEVANVKSVVVPTSAAKAATDDQNHLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPL 186 +A +L A + ++ + + A + KI + L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPEATL 165 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 + V G +G+ + G+ + V G+P Sbjct: 166 IAGNVATG---DATRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 211 TAIYDAATAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|159040655|ref|YP_001539907.1| ferredoxin-dependent glutamate synthase [Caldivirga maquilingensis IC-167] gi|157919490|gb|ABW00917.1| ferredoxin-dependent glutamate synthase [Caldivirga maquilingensis IC-167] Length = 463 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 18/149 (12%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K I++ + G I G+ GGT + + ++L G P Sbjct: 300 VWVKVGPYRDVLDVIKVSYEEGADAVVIDGKEGGTGMAPSVAMKEL-----------GYP 348 Query: 245 TPLSLEMARPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 T + L R ++ + +G L NG I KS LGAS PF+ AM + Sbjct: 349 TIVGLIKIRKARLMGIDDKVSLLLAGRLFNGAHIAKSRALGASAIYAGRPFIVAAMAKGE 408 Query: 300 -AVVAAIESLRKEFIVSMFLLGTKRVQEL 327 V IE+ R E + + LG +++L Sbjct: 409 VGVRNFIEATRVETQMVVSALGKYDIKDL 437 Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 F +V+ G K S PL+++SM G+ + R + +A AA K + +G Sbjct: 105 FTDVNLETNIGGLKSSMPLVVASM--GSTDIASRYSIVIAKAAAKEGIPYGIG------E 156 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + + ++ ++ R H + A N D Sbjct: 157 NVHTVRGYDKRLTHGHPSFKERVMAYLTNIDK 188 >gi|122891156|emb|CAM14145.1| dihydropyrimidine dehydrogenase [Danio rerio] gi|148725195|emb|CAN88518.1| dihydropyrimidine dehydrogenase [Danio rerio] Length = 738 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 69/374 (18%), Positives = 116/374 (31%), Gaps = 97/374 (25%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 L H A+ D VD SVE G K P ++S + + I R A + Sbjct: 236 RLPLFHCAI-----DTVDISVEMCGIKFPNPFGLASAPPTTSAAM--IRR-----AFEQG 283 Query: 88 VAMAV--------------------GSQRVMFSDHNAIKSF------------------- 108 A+ G+ SF Sbjct: 284 WGFALTKTFGLDKDLVTNVSPRIVRGTTSGHIFGPGQ-GSFLNIELISEKTAAYWCKSVA 342 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ------- 161 EL+ P ++I+++ D+ + A A AD L L+L+ + + Sbjct: 343 ELKADFPKNIIIASIMCSYNQADWT-ELAKMAQES-QADALELNLSCPHGMGERGMGLAC 400 Query: 162 ---PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG-LKSGIRYFD----I 213 P N + A +P K + +DI + G + Sbjct: 401 GQDPELVRNICRW------VRKATSIPFFAKLTPNVTNIVDIATAAYEGGADGVTATNTV 454 Query: 214 AG-----RGGTSWSRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGL 267 +G T W I R + G V + P L ++ +A+GG+ Sbjct: 455 SGLMALKADATPWPGI--GRGARTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGI 512 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 513 DSAESGLQFLHAGASVLQVC-----SAVQNQDFTV--IEDYCLGLKALLYL---KSIEEL 562 Query: 328 Y----LNTALIRHQ 337 + + IRHQ Sbjct: 563 HDWDGQSPPTIRHQ 576 >gi|320334558|ref|YP_004171269.1| glutamate synthase [Deinococcus maricopensis DSM 21211] gi|319755847|gb|ADV67604.1| Glutamate synthase (ferredoxin) [Deinococcus maricopensis DSM 21211] Length = 1508 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 88/268 (32%), Gaps = 35/268 (13%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV---------- 88 + D VD + G S P +IS+M+ G+ R+ AA++ + Sbjct: 845 VDPDGVDLA--IGGH--SLPFVISAMSFGSQGETAF--RSYVEAAKRLNIVAMNGEGGEI 898 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYA---PHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +G A F + H + I + + +V V Sbjct: 899 PSMIGQYNHWRGQQVASGRFGVSSVMLNSAHVIEIKVGQGAKPGEGGHLPGKKVSVKV-- 956 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDI 200 H ++I P+ N + + +A L + + +K Sbjct: 957 --AAARHAVQGTDLISPSNNHDVYSIED-LAQLIEELKTVAPQAKISVKVPVVPGIGTIA 1013 Query: 201 ELGLKSGIRYFDIAG-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 K+G ++G GGT + R + ++G+ ++ ++ Sbjct: 1014 LGVAKAGAHIITLSGFEGGTG-----AARSHALKYAGMPVEFGVKRAHKALVSAGIRDKI 1068 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLA 287 + A GGL+ +D+ + + LGA+ G Sbjct: 1069 ELWADGGLKTALDVARVVALGANRVGFG 1096 >gi|307709494|ref|ZP_07645951.1| guanosine monophosphate reductase [Streptococcus mitis SK564] gi|307619808|gb|EFN98927.1| guanosine monophosphate reductase [Streptococcus mitis SK564] Length = 328 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G Y+F Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYEFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|303231948|ref|ZP_07318656.1| GMP reductase [Veillonella atypica ACS-049-V-Sch6] gi|302513377|gb|EFL55411.1| GMP reductase [Veillonella atypica ACS-049-V-Sch6] Length = 328 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 83/279 (29%), Gaps = 46/279 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V+ + + P++ M I+ LA + Sbjct: 10 YEDVQLIPNKCIVNSRSECDTHVKLGNRTFNLPVV-------PANMQTIIDEELAEKLAE 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVHVL 144 + F R + L S++ +F V + +A + Sbjct: 63 KG-----YFYIMHRFQPERRLDFVKRMQEKN--LYSSISIGVKEEEFALVDELAKANLIP 115 Query: 145 GADGLFL---HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + H N + ++IQ + + ++ G + + Sbjct: 116 DYITIDIAHGHSNAVIDMIQ---------------YIKKNLPTTFVI--AGNVGTPEAVR 158 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + G + G W + ++ + Sbjct: 159 ELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-PI 207 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 IA GG+R+ DI KSI GA++ + S F + Sbjct: 208 IADGGIRDHGDIAKSIRFGATMVMIGSLFAGHQESPGEE 246 >gi|296450521|ref|ZP_06892276.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296879355|ref|ZP_06903350.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260648|gb|EFH07488.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296429898|gb|EFH15750.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 377 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 98/308 (31%), Gaps = 62/308 (20%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---------EKTKVA--MAVGSQRV 97 FLGK+L PL+I S + +I + A A M + Sbjct: 19 NFLGKELKSPLIIGSGPLTYSAAGCKILSDAGAGAVVTKTIRKERAINPAPHMVRNTANA 78 Query: 98 MFSD-------HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 + ++ FE+ Q + + +V + + + + GAD + Sbjct: 79 LLNNEKWTDFEPEQWIDFEIPQMKRDGTVC--IASVGHTIEESSELVEKVANA-GADFI- 134 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLKSGIR 209 E++ + ++ DL + +++P+++K D + ++G Sbjct: 135 -------ELV----SYDYRDLIPMLKDAKERVNIPVIVKLPPMIDEIGDFAKKLEEAGAD 183 Query: 210 YFDIAGRGGTSWSRI-ESHRDLESDIGIVFQDWGI----------PTPLSLEMARPYCNE 258 T+ + + R + GI T + + Sbjct: 184 AI-------TACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQRIYEIKK-QVN 235 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGL-ASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 I GG +G D L+ I+ GA G+ + LK A I + + ++ Sbjct: 236 IPIIGLGGCVSGDDALEMIMAGADFVGICSVVILKGA--------QVISKIHDDLKSNLN 287 Query: 318 LLGTKRVQ 325 LG ++ Sbjct: 288 RLGYNTIE 295 >gi|194872333|ref|XP_001973010.1| GG15849 [Drosophila erecta] gi|190654793|gb|EDV52036.1| GG15849 [Drosophila erecta] Length = 2114 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1079 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1138 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1139 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1190 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1191 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 1250 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1251 AGLGIRKFQDLIGRTDLLR 1269 >gi|84501338|ref|ZP_00999543.1| glutamate synthase family protein [Oceanicola batsensis HTCC2597] gi|84390629|gb|EAQ03117.1| glutamate synthase family protein [Oceanicola batsensis HTCC2597] Length = 501 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 28/170 (16%) Query: 142 HVLGADGLFLHLNPL-QEIIQPNGN---TNFADLSSKIALLSSAMDVPLLLKEVGC---- 193 + + + P+ Q+ + PN + +F DL +IA + P+ K V Sbjct: 246 EKITPEIASIRGIPVGQDSLSPNRHPDIRSFGDLLDQIAHIRRVTGKPVGFKTVLGSSDS 305 Query: 194 --GLSSMDIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 GL +E G + I G GGT + + G+P +L Sbjct: 306 YEGLFRQILERGAIHAPDFITIDGGEGGT-----------GAAPMPLMDLVGMPLREALL 354 Query: 251 MARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + IASG L N D+ +I GA A F+ Sbjct: 355 RITDMRDRFGLHDRIRIIASGKLVNPSDVAWAICAGADFVTTARGFMFSL 404 >gi|159138337|gb|ABW89171.1| glycolate oxidase [Helianthus annuus] Length = 100 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 22/102 (21%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + P+L+K V +++ D L +++G ++ G + + Sbjct: 20 WKDVKWLQTITTTPILVKGV---ITAEDTRLAIQAGAAGIIVSNHGARQLDYVPA----- 71 Query: 232 SDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 T ++LE + GG+R G D Sbjct: 72 -------------TIMALEEVVKAAQGRVPVFLDGGVRRGTD 100 >gi|195590926|ref|XP_002085195.1| GD12441 [Drosophila simulans] gi|194197204|gb|EDX10780.1| GD12441 [Drosophila simulans] Length = 2252 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1085 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1144 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1145 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1196 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1197 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRKIM 1256 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1257 AGLGIRKFQDLIGRTDLLR 1275 >gi|170740077|ref|YP_001768732.1| glutamate synthase (ferredoxin) [Methylobacterium sp. 4-46] gi|168194351|gb|ACA16298.1| Glutamate synthase (ferredoxin) [Methylobacterium sp. 4-46] Length = 1564 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 1014 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNPDAEVSVKLVSEVGVGTVAAGVAKAR 1073 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + + S + + G+ + A GG Sbjct: 1074 ADHITISGFDGGTGAAPLTSIKHAGGP-----WEIGLAETQQTLVLNHLRGRVALQADGG 1128 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 +R G D+L + +LGA G ++ L A + Sbjct: 1129 IRTGRDVLIAALLGADQFGFSTAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFKGTP 1188 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + +E M LG ++ EL Sbjct: 1189 EHVINYFFFVAEEVRELMAALGVTKLDEL 1217 >gi|89073115|ref|ZP_01159654.1| inositol-5-monophosphate dehydrogenase [Photobacterium sp. SKA34] gi|89051068|gb|EAR56525.1| inositol-5-monophosphate dehydrogenase [Photobacterium sp. SKA34] Length = 487 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I +A ++P++ V ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRAAFPNLPIVGGNVA---TAEGARALIEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A ++ IA GG+R D+ K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAISEAASVADQYGIPVIADGGIRYSGDMCKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVELYQGRSYKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VA---AIESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + SM L G+ +++L +R Sbjct: 421 VAYKGYLKEIVHQQMGGLRSSMGLTGSATIEDLRTKAEFVR 461 >gi|189220292|ref|YP_001940932.1| glutamate synthase domain large chain [Methylacidiphilum infernorum V4] gi|189187150|gb|ACD84335.1| Glutamate synthase domain large chain [Methylacidiphilum infernorum V4] Length = 1517 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 68/198 (34%), Gaps = 35/198 (17%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG-RGGTSWSRIESH 227 DLS I L A + +K V K+ I+G GGT S I S Sbjct: 1012 DLSQLIYDLKQANPRAKICVKLVSEAGVGTIAAGVAKAHADIILISGCEGGTGASPISSI 1071 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS----------- 276 + G+ + M + GGLR G DI+ + Sbjct: 1072 -----KYAGTPWELGVAETQQVLMLNGLRSRVTLRTDGGLRTGRDIVIAAILGAEEYNFG 1126 Query: 277 ----IILGASLG----------GLAS--PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 I +G G+A+ P L+ + +AV+A + ++ +E + L Sbjct: 1127 TMALIAMGCVYVRHCHLNTCPTGIATQDPKLRSRFKGTPEAVIAYLNAVAQEVREILASL 1186 Query: 320 GTKRVQELYLNTALIRHQ 337 G + + E+ T L+ + Sbjct: 1187 GARSLNEIIGRTELLEQR 1204 >gi|159030105|emb|CAO90997.1| guaB [Microcystis aeruginosa PCC 7806] Length = 387 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 108/382 (28%), Gaps = 103/382 (26%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTG------------------ 66 D+ L+ + + D + P++ S+M G Sbjct: 16 GIDEIALVP-GVRTLDPSLADTRWSLGNIEREIPIIASAMDGVVDTKMAVLLSELGALGV 74 Query: 67 ----GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELR--QYAPHTVLI 120 G E N L A VG + ++++ + ELR + + Sbjct: 75 LNLEGIQTRYEDPNPILDRI-TAVGKAEFVGLMQELYAEPIKPQLIELRIQEIQEKGGIA 133 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFL---HLNPLQEIIQPNGNTNFADLSSKIAL 177 + +G A A +L + HL+P E I P + Sbjct: 134 AVSLTPAGAVKYGAIVAQAAADILFVQATVVSTAHLSP--EAITPLD----------LVQ 181 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESH 227 L M +P++L G ++ +K+G + G G G + + Sbjct: 182 LCQEMPIPVVL---GNCVTYEVALNLMKTGAAGVLVGIGPGAACTSRGVLGVGVPQATAV 238 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 D + F++ G IA GG+ G DI K I GA + Sbjct: 239 ADCAAARDDFFRETG--------------KYVPVIADGGIITGGDICKCIACGADAVMIG 284 Query: 288 SPFLKPAMD------------------------SSDAVVAAI-----------ESLRKEF 312 SP + S +A I +L Sbjct: 285 SPIARSVEAPGRGFHWGMATPSPVLPRGTRISVGSTGTIAEILVGPAKLDDGTHNLLGAL 344 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 345 KTSMGTLGAKNLKEMQQVEVVI 366 >gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum DSM 6946] gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum DSM 6946] Length = 482 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 27/196 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 RQ P+ + G +++ GV + +A + A L L+ + + Sbjct: 202 RQEYPNANKDA-FGRLRVGAAIGVGQLDRARALSEAGVDVLVLDSA--------HGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + L+ +DV ++ G +S E + +G+ I G+ + Sbjct: 253 IIDTVKLIKKELDVDIIA---GNIATSEAAEALVAAGVDGIKIGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P ++E + IA GG++ D K++ GA + Sbjct: 303 -----RIVSGVGVPQISAIEECSEVGRKHGVPVIADGGIKYSGDFAKALAAGAQSV-MVG 356 Query: 289 PFLKPAMDSSDAVVAA 304 L +S V+ Sbjct: 357 SLLAGTDESPGEVITY 372 >gi|83648606|ref|YP_437041.1| glutamate synthase subunit alpha [Hahella chejuensis KCTC 2396] gi|83636649|gb|ABC32616.1| Glutamate synthase domain 2 [Hahella chejuensis KCTC 2396] Length = 1483 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + G+ Sbjct: 997 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIKYAGSP-----WELGLS 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 A + GGL+ G+D++K+ ILGA G P + Sbjct: 1052 EAHQALRANDLRGNVRLQTDGGLKTGLDVVKAAILGAESFGFGTGPMVALGCKYLRICHL 1111 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + + E M LG + ++EL T L+ Sbjct: 1112 NNCATGVATQNKDLRDKHFQGTVEMAINYFKFVATETREWMAKLGVRSLEELVGRTDLLE 1171 >gi|52548489|gb|AAU82338.1| glutamate synthase subunit alpha [uncultured archaeon GZfos14B8] Length = 218 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 11/141 (7%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P + + D +I D + +K M +G + Sbjct: 13 PFHSVYSVEDHKKHVDWIKEINP-----DAIVSVKVSTPTDVDMVAVGSYYAGANIIHLD 67 Query: 215 G-RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 G GGT + + +++ I ++ IP + ++ IASGG+R D+ Sbjct: 68 GSYGGTGAAPDIAKKNIAMPI-----EYAIPKVHEFLKEQGMRDKMTLIASGGIRTAHDV 122 Query: 274 LKSIILGASLGGLASPFLKPA 294 K+I LGA + + L Sbjct: 123 AKAIALGADGVVIGTAELVAL 143 >gi|24665539|ref|NP_648922.1| CG9674, isoform A [Drosophila melanogaster] gi|28574881|ref|NP_788517.1| CG9674, isoform D [Drosophila melanogaster] gi|20151455|gb|AAM11087.1| GH26789p [Drosophila melanogaster] gi|23093321|gb|AAF49409.2| CG9674, isoform A [Drosophila melanogaster] gi|28380502|gb|AAO41243.1| CG9674, isoform D [Drosophila melanogaster] Length = 2114 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1079 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1138 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1139 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1190 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1191 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 1250 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1251 AGLGIRKFQDLIGRTDLLR 1269 >gi|189501230|ref|YP_001960700.1| ferredoxin-dependent glutamate synthase [Chlorobium phaeobacteroides BS1] gi|189496671|gb|ACE05219.1| ferredoxin-dependent glutamate synthase [Chlorobium phaeobacteroides BS1] Length = 546 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 46/253 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAE--KTKVAMAVGSQRVMFSDHNAIKSFEL 110 +LS PL +S M+ G + I L+ AE +T + G A S Sbjct: 211 LELSIPLFVSDMSFGA--LSREIKIALSRGAELSETGICSGEGGM---LEAERAENSRYF 265 Query: 111 RQYAP------------------HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 + AP + G + V + V + + + Sbjct: 266 YELAPGEFGWDIEQVTRCQAFHFKAGQAAKTGTGGMLPAEKVSEEIATVRGVAPNTSAVS 325 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + ++++ P +F ++ ++ + +P+ K + DI+ L+ G+ Y Sbjct: 326 PSRFRKLVTPE---DFQRIAEEVRQATG--GIPVGCKLSAQHIER-DIDFALEVGVDYII 379 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN-----EAQFIASGGL 267 + GRGG + + ++ + +PT +L AR + + I +GGL Sbjct: 380 LDGRGGGTGASP----------DLLKNNIAVPTIPALARARKHLDTRGAGHVTLIITGGL 429 Query: 268 RNGVDILKSIILG 280 R LK++ LG Sbjct: 430 RTESHFLKALALG 442 >gi|111120011|gb|AAV31916.2| glutamate synthase [Aedes aegypti] Length = 2084 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L + + +K V + K + I+G GGT SW+ I Sbjct: 1048 DLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1107 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +S + + GI + + + A G LR G D++ + ILGA Sbjct: 1108 KS--------AGLPWELGIAETHQVLVLNDLRSRVVVQADGQLRTGFDVVVAAILGADEF 1159 Query: 285 GLAS---------------------------PFLKPAMDS-SDAVVAAIESLRKEFIVSM 316 G ++ P L+ + VV L +E M Sbjct: 1160 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRAKFAGKPEHVVNYFFMLAEEIREIM 1219 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L++ Sbjct: 1220 ASLGLRKFQDLIGRTDLLQ 1238 >gi|157107014|ref|XP_001649585.1| glutamate synthase [Aedes aegypti] gi|108868750|gb|EAT32975.1| glutamate synthase [Aedes aegypti] Length = 2084 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L + + +K V + K + I+G GGT SW+ I Sbjct: 1048 DLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1107 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +S + + GI + + + A G LR G D++ + ILGA Sbjct: 1108 KS--------AGLPWELGIAETHQVLVLNDLRSRVVVQADGQLRTGFDVVVAAILGADEF 1159 Query: 285 GLAS---------------------------PFLKPAMDS-SDAVVAAIESLRKEFIVSM 316 G ++ P L+ + VV L +E M Sbjct: 1160 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRAKFAGKPEHVVNYFFMLAEEIREIM 1219 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L++ Sbjct: 1220 ASLGLRKFQDLIGRTDLLQ 1238 >gi|258542559|ref|YP_003187992.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256633637|dbj|BAH99612.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256636696|dbj|BAI02665.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-03] gi|256639749|dbj|BAI05711.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-07] gi|256642805|dbj|BAI08760.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-22] gi|256645860|dbj|BAI11808.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-26] gi|256648913|dbj|BAI14854.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-32] gi|256651900|dbj|BAI17834.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654957|dbj|BAI20884.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-12] Length = 336 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 105/317 (33%), Gaps = 62/317 (19%) Query: 45 DPSVEFLGKKLSFPLLISSM--------------TGGNNKMIERINRNLAIAAEKTKVAM 90 D +LG +L+ P++ S+ G + ++ + A E +A Sbjct: 4 DMRTNYLGLELAHPVVASASPLTADLEGILRVADAGASAIVMASVFEEDIQAQE---LAE 60 Query: 91 AVGSQRVMFSDHNAIKSFEL--------------RQYAPH--TVLISNLG----AVQLNY 130 A + S A F + R A +I++L A L + Sbjct: 61 AALWETGENSHPEAAGYFPVMHHASPLDGRLAVLRSAAERAGVPIIASLNGCTPAGWLRF 120 Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 +++A A + + + NP + Q + + + + VP+ +K Sbjct: 121 AKDMEQAGAA--AIELNFWHVPTNPDETGAQVEER-----CIQVLRDVRAQVKVPVSVKL 173 Query: 191 VGCGLSS-MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF---QDWGIPTP 246 S ++ ++G + R L + F + + P Sbjct: 174 SPFFSSPGNMVKRLSENGAGGIVLFNS-----FYEPGLRSLTESAEVDFVPSSAYELRLP 228 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 L +A SGG+ +G+D+ K ++ GA + +AS L+ + I Sbjct: 229 LMWAALLSEHCQADLAISGGVHSGMDVAKCLLAGADVAMVASVLLQKGPN-------YIS 281 Query: 307 SLRKEFI--VSMFLLGT 321 +L E +SM LG Sbjct: 282 TLLNELREWMSMQNLGA 298 >gi|254975666|ref|ZP_05272138.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-66c26] gi|255314794|ref|ZP_05356377.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-76w55] gi|255517469|ref|ZP_05385145.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-97b34] gi|255650579|ref|ZP_05397481.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-37x79] gi|255656048|ref|ZP_05401457.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-23m63] gi|260683677|ref|YP_003214962.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile CD196] gi|260687337|ref|YP_003218471.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291] gi|306520522|ref|ZP_07406869.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-32g58] gi|260209840|emb|CBA63725.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile CD196] gi|260213354|emb|CBE04953.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291] Length = 361 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 98/308 (31%), Gaps = 62/308 (20%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---------EKTKVA--MAVGSQRV 97 FLGK+L PL+I S + +I + A A M + Sbjct: 3 NFLGKELKSPLIIGSGPLTYSAAGCKILSDAGAGAVVTKTIRKERAINPAPHMVRNTANA 62 Query: 98 MFSD-------HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 + ++ FE+ Q + + +V + + + + GAD + Sbjct: 63 LLNNEKWTDFEPEQWIDFEIPQMKRDGTVC--IASVGHTIEESSELVEKVANA-GADFI- 118 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLKSGIR 209 E++ + ++ DL + +++P+++K D + ++G Sbjct: 119 -------ELV----SYDYRDLIPMLKDAKERVNIPVIVKLPPMIDEIGDFAKKLEEAGAD 167 Query: 210 YFDIAGRGGTSWSRI-ESHRDLESDIGIVFQDWGI----------PTPLSLEMARPYCNE 258 T+ + + R + GI T + + Sbjct: 168 AI-------TACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQRIYEIKK-QVN 219 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGL-ASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 I GG +G D L+ I+ GA G+ + LK A I + + ++ Sbjct: 220 IPIIGLGGCVSGDDALEMIMAGADFVGICSVVILKGA--------QVISKIHDDLKSNLN 271 Query: 318 LLGTKRVQ 325 LG ++ Sbjct: 272 RLGYNTIE 279 >gi|212638211|ref|YP_002314731.1| glutamate synthase large subunit [Anoxybacillus flavithermus WK1] gi|212559691|gb|ACJ32746.1| Glutamate synthase large subunit [Anoxybacillus flavithermus WK1] Length = 1490 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 33/262 (12%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVG 93 VD SV G+ S P +I+SM+ G+ I R A AA + + +G Sbjct: 828 VDISV---GEH-SLPFVIASMSFGSQNEIAF--RAYAEAANRLNMISLNGEGGEIKDMLG 881 Query: 94 SQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLF 150 A F + +L +G + G + + + A Sbjct: 882 KYPRTRGQQVASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIAEARNAT 941 Query: 151 LHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKS 206 + ++I P+ N + DL+ IA L +A D + +V + I + K+ Sbjct: 942 I----GSDLISPSNNHDIYSIEDLAQMIAELKTANDQAKVAVKVPVVPNIGTIAVGIAKA 997 Query: 207 GIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G ++G GGT +RI + + + + + G+ + + ++ + A G Sbjct: 998 GADIITLSGFDGGTGAARIHAIQHVGLPV-----EIGVKAAHNALLEAGLRHQVEIWADG 1052 Query: 266 GLRNGVDILKSIILGASLGGLA 287 G+++ +D++K ++LGA+ G Sbjct: 1053 GIKSAMDVIKVMLLGANRVGFG 1074 >gi|149174954|ref|ZP_01853578.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797] gi|148846291|gb|EDL60630.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797] Length = 494 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 115/373 (30%), Gaps = 105/373 (28%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIA-- 82 FDD L+ A EI EV + + L+ P++ S M + + + Sbjct: 12 FDDV-LLQPAYSEIMPSEVSVATQLTRNIPLNVPIISSPM--------DTVTESDMAIGM 62 Query: 83 AEKTKV------------AMAVG----SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV 126 A++ + AM V S+ + D + A + N+G V Sbjct: 63 AQEGGIGIIHKNMTAEQQAMLVDVVKRSEHGVIVDPVTLPPEATVAEAAEIMKRRNIGGV 122 Query: 127 QLN-------------------YDFGVQKA---HQAVHV-----LGADGLFLHLNPLQEI 159 + D + + + V L A L N ++++ Sbjct: 123 PVTKNGKLVGILTSRDLRFLDTPDKSISEVMTKDKLVTAKEDTTLEAAQRILLENKVEKL 182 Query: 160 IQPNGNTNFADLSSKIALLSSAMDVPLLLKE------VGCGLSSMD---IELGLKSGIRY 210 + + N L + I + M PL K+ VG + D L ++ G+ Sbjct: 183 LLVDENYQLKGLIT-IKDIDKTMQFPLASKDSRGRLRVGAAVGVRDYERAALLIEKGVDL 241 Query: 211 FDIAGRGGTSWSRIESHRDLE------------------SDIGIVFQD------------ 240 + G S + IE+ R+++ D+ D Sbjct: 242 LVVDSAHGHSGNVIETVREIKKQWDIDVVAGNVATEQGARDLADAGADAVKVGIGPGSIC 301 Query: 241 -------WGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G+P T +S + IA GG+R DI K++ GA + L Sbjct: 302 TTRIISGVGVPQLTAISNAAKALEGSGIPVIADGGIRYSGDIAKALAAGAHTV-MLGGLL 360 Query: 292 KPAMDSSDAVVAA 304 +S ++ Sbjct: 361 AGLDESPGELILY 373 >gi|149019241|ref|ZP_01834603.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP23-BS72] gi|147931111|gb|EDK82090.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP23-BS72] Length = 279 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 79/265 (29%), Gaps = 40/265 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KSI GAS+ + S F Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLF 234 >gi|78776969|ref|YP_393284.1| inositol-5-monophosphate dehydrogenase [Sulfurimonas denitrificans DSM 1251] gi|78497509|gb|ABB44049.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas denitrificans DSM 1251] Length = 481 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 ++ + + + + + + + V ++ G ++ +++G + G Sbjct: 241 LVLDSAHGHSKGILDTVKEIKKTLMVDVIA---GNIATAEATLALIEAGADGVKVGIGPG 297 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKS 276 + + + GIP ++ + IA GG++ DI K+ Sbjct: 298 SICTT------------RIVAGVGIPQISAISECADVGRQHGVPIIADGGIKYSGDIAKA 345 Query: 277 IILGASLGGLASPFLKPAMDSSDAVV 302 + +GAS +A L +S + Sbjct: 346 LAVGASCI-MAGSILAGTEESPGETI 370 >gi|242310616|ref|ZP_04809771.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT 98-5489] gi|239523014|gb|EEQ62880.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT 98-5489] Length = 483 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 78/253 (30%), Gaps = 42/253 (16%) Query: 56 SFPLLISSMTGGNNKMIERI-NRNLAI---AAEKTKVAMAVGSQRVMFSDHNAIKSFELR 111 PL I++ G + + I N++ + + + + + + S + Sbjct: 154 KAPL-ITAQVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQKRIEYPHS--NK 210 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 + + +G Q YD V VL D H + Sbjct: 211 DDFGRLRVGAAIGVFQ--YDRAKALVDAGVDVLVLDSAHGH---------------SRGI 253 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I + + V ++ V + + +++G + G+ + Sbjct: 254 LETIKEIKKHLVVDIVAGNVA---TKEGAKALIEAGADGVKVGIGPGSICTT-------- 302 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASP 289 + G+P ++ CN+ IA GG++ DI K++ GAS + Sbjct: 303 ----RIVAGVGVPQITAIADVAEICNQEGIPLIADGGIKYSGDIAKALAAGASSV-MIGS 357 Query: 290 FLKPAMDSSDAVV 302 L +S + Sbjct: 358 MLAGTEESPGETI 370 >gi|332200696|gb|EGJ14768.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA41317] Length = 328 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENIAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVRQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|170289792|ref|YP_001736608.1| ferredoxin-dependent glutamate synthase [Candidatus Korarchaeum cryptofilum OPF8] gi|170173872|gb|ACB06925.1| ferredoxin-dependent glutamate synthase [Candidatus Korarchaeum cryptofilum OPF8] Length = 448 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 94/289 (32%), Gaps = 48/289 (16%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 +V VE G KL P+ + GG ++ + +A + +A ++G + Sbjct: 65 DVGTEVEVGGFKLRMPITCAP-PGG--RIADLSGPRIAEVCAEMGIAYSLGENIAPVRGY 121 Query: 103 NAI----KSFELRQYAPHTVLISNLGAVQLNYDFGVQK----------------AHQAVH 142 + SF+ R + L G + + + + + Sbjct: 122 DVRLTDQPSFKERALSYLENLRGEYGGLIIQQGVKDEDLKLWERIYSDPDFDPYIERGLI 181 Query: 143 VLGADGLFLHLNPLQEIIQPN----------GNTNFAD--LSSKIALLSSAMD-VPLLLK 189 ++L ++ + + F + L+ +I LL + V L L+ Sbjct: 182 AFEIKAEQIYLGDAKDEFMDDPGSALGGRYPASRTFTEEILAGQIRLLRNNFPRVRLFLR 241 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 IE+ + G+ + G G + I S + S+ Sbjct: 242 TGPYRDLDRVIEIASREGVDAITLDGEG----AWISSLAGARVPALVCLS--------SI 289 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 AR E + SG L +G +LKSI LGA L P + + S Sbjct: 290 SRARERGIETSMMISGMLYDGPSVLKSIALGADAVSLGEPVIYACLGGS 338 >gi|119945972|ref|YP_943652.1| ferredoxin-dependent glutamate synthase [Psychromonas ingrahamii 37] gi|119864576|gb|ABM04053.1| ferredoxin-dependent glutamate synthase [Psychromonas ingrahamii 37] Length = 527 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 106/322 (32%), Gaps = 60/322 (18%) Query: 16 DPGIDRNKKFFD----DWHLIHRALPEISFDEVDPSVEFLGKK-----LSFPLLISSMTG 66 D FD + ++ ++ ++DP V+F G ++ PL IS+M+ Sbjct: 103 DRDTRPFGTIFDVNRAGYEWVNHSMQPKHLLDLDPRVKFGGPDCLKPYMASPLNISAMSY 162 Query: 67 G--NNKMIERINR--NLAIAAEKTK--------------VAMAVGSQRVMFSDHNAI--- 105 G + I +NR + + T + +G+ D++ Sbjct: 163 GALSKNAIMALNRGAKIGGFSHNTGEGSISPYHLEHGGDIVWQLGTGYFGCRDNDGRFNP 222 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 ++F H V + + Q G A + H+ Q+++ P + Sbjct: 223 ETFT-ENATKHVVKMIEIKLSQ-GAKPGHGGILPAAKLTEEIAAIRHVPMGQDVVSPPSH 280 Query: 166 TNFADLSSKIALLSSAMDV----PLLLKE-VGCGLSSMDIELGL---KSGIRYFDI-AGR 216 + F+ + + D+ P+ K VG + I + + + G Sbjct: 281 SAFSTPVELLNFVKKLRDLSGGKPIGFKFCVGRQDEFIAICKAMIETGISPDFITVDGGE 340 Query: 217 GGTSWSRIESH-------RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 GGT + E RD + + +G+ + IASG + Sbjct: 341 GGTGAAPTEMTNSVGTPIRDGLTFVNNALIGFGL------------RKHIRIIASGKMFT 388 Query: 270 GVDILKSIILGASLGGLASPFL 291 IL++I LGA A + Sbjct: 389 AFHILRAIALGADTVNSARGMM 410 >gi|257076324|ref|ZP_05570685.1| inosine 5'-monophosphate dehydrogenase [Ferroplasma acidarmanus fer1] Length = 485 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 31/192 (16%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ G + + G +A+++ A FL ++ + + + Sbjct: 204 REKFPNAS-RDEQGQLMVGAAIGAYDIDRAINLENAGSDFLVIDTA--------HAHNKN 254 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + S + + +A+ + ++ G ++ E + G+ + G+ + Sbjct: 255 VLSSLKKIRNAIHIDIIA---GNIATAEAAEDLISLGVDGLRVGIGPGSICTT------- 304 Query: 231 ESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + GIP T +S + IA GG+R D++K++ GAS Sbjct: 305 -----RIVAGVGIPQLTAISDVADVASEHGIPVIADGGIRYSGDMIKALAAGASTV---- 355 Query: 289 PFLKPAMDSSDA 300 L + ++ Sbjct: 356 -MLGSLLAGTEE 366 >gi|260665257|ref|ZP_05866106.1| guanosine monophosphate reductase [Lactobacillus jensenii SJ-7A-US] gi|260560994|gb|EEX26969.1| guanosine monophosphate reductase [Lactobacillus jensenii SJ-7A-US] Length = 330 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 87/280 (31%), Gaps = 43/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 ++D L+ S E D SV+F + P++ M IN LAI A Sbjct: 12 YNDIQLVPNKCIIKSRKEADTSVKFGNRTFKIPVV-------PANMQSVINEQLAIWLAQ 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 M F + L +++ + ++ + V Sbjct: 65 NDYYYVM-------HRFQPEKRADF--IKMMHDKKLFASISVGIKDEEYTF--IDELVKQ 113 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ ++ G++++ + I + M L G + + Sbjct: 114 -DLIPEYITIDVAH------GHSDY--VIKMIKYIKDKMPDSFLT--AGNVATPEAVREL 162 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L M ++ IA Sbjct: 163 ENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAASK-PIIA 211 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + L +S V+ Sbjct: 212 DGGIRYNGDIAKSVCFGASMV-MIGSMLAGHEESPGNVIK 250 >gi|195328240|ref|XP_002030824.1| GM24365 [Drosophila sechellia] gi|194119767|gb|EDW41810.1| GM24365 [Drosophila sechellia] Length = 1498 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1086 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1145 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1146 KN--------AGLPWELGVAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1197 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1198 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 1257 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1258 AGLGIRKFQDLIGRTDLLR 1276 >gi|295703268|ref|YP_003596343.1| putative flavoenzyme [Bacillus megaterium DSM 319] gi|294800927|gb|ADF37993.1| putative flavoenzyme [Bacillus megaterium DSM 319] Length = 524 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 13/150 (8%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGL-- 204 +L P + + PN FA + +V P+ +K V + ++ Sbjct: 289 IRNLKPGESVDSPNRFKEFASYPEMFQFIEKLRNVGGKPVGIKVVVGNTNDLEEMAAYMN 348 Query: 205 --KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 SG + I G GGT S E + +F G+P L +E + Sbjct: 349 ETGSGPDFITIDGAEGGTGASFQELA---DGAGVPLFS--GLPFVDELLKKYGVRDEVKL 403 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFL 291 ASG L I ++ LGA +A F+ Sbjct: 404 FASGKLLTADKIATALSLGADCVNIARGFM 433 >gi|332991837|gb|AEF01892.1| glutamate synthase subunit alpha [Alteromonas sp. SN2] Length = 1488 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT S + S + S + + Sbjct: 997 ISVKLVSEPGVGTIATGVAKAYADLITVSGYDGGTGASPLTSVKYAGSPFELGLSE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 T +L ++ + GGL+ G+D++K+ ILGA G P + Sbjct: 1053 TQQALIE-NGLRHKVRVQTDGGLKTGLDVVKAGILGAESFGFGTGPMVALGCKYLRICHL 1111 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 D V+ + + +E M LG + +L T L++ Sbjct: 1112 NNCATGVATQDQKLRDDHFIGLPDMVMNYFKFIAQEVREIMAALGVTKFDDLVGRTELLK 1171 >gi|149195662|ref|ZP_01872719.1| glutamate synthase large subunit [Lentisphaera araneosa HTCC2155] gi|149141124|gb|EDM29520.1| glutamate synthase large subunit [Lentisphaera araneosa HTCC2155] Length = 2482 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 31/204 (15%) Query: 158 EIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 E++ P + + + L+ A +++K V K+G ++AG Sbjct: 1188 ELVSPPPHHDTYSIEDLGQLIHDCKASRAKVIVKLVSSEGIGTIAVGVAKAGADVINVAG 1247 Query: 216 R-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GGT + + S ++ + GI ++ +S + G+D++ Sbjct: 1248 NTGGTGAAAVTSLKNTGRS-----AELGIAEVHQALALNGLRDKVILRSSNAHQTGIDVI 1302 Query: 275 KSIILGAS---LGGLASPFLKPAM--------------------DSSDAVVAAIESLRKE 311 KS ILGA G A LK M + A+ ++ +E Sbjct: 1303 KSAILGADSFEFGTSALMMLKCVMAKNCNIKCPAGITTNPELFTGDARALAQYFLNVAQE 1362 Query: 312 FIVSMFLLGTKRVQELYLNTALIR 335 + LG K + E+ T L+ Sbjct: 1363 VRELLAYLGHKSIDEVRGKTELLH 1386 >gi|224535640|ref|ZP_03676179.1| hypothetical protein BACCELL_00504 [Bacteroides cellulosilyticus DSM 14838] gi|224522744|gb|EEF91849.1| hypothetical protein BACCELL_00504 [Bacteroides cellulosilyticus DSM 14838] Length = 363 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDW 241 VP++ + + + G GG + E +D + + + Sbjct: 130 VPIVSSSRAAKIICDKWQKNFDYLPDAIVVEGPKAGGHLGFKKEQIQDEKYALESL---- 185 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 IP +++ M+ + IA+GG+ G DI + + LGAS + S F+ Sbjct: 186 -IPEVVAIAMSYKERKDIPVIAAGGISTGEDIARFMQLGASAVQMGSIFV 234 >gi|242309165|ref|ZP_04808320.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524206|gb|EEQ64072.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 364 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 27/217 (12%) Query: 98 MFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 +S + ++ F+ R+ L +N+ Y V+ A +A + G L N Sbjct: 76 FYSKESLLEIFKNARKICGENPLGANILYAINEYGRVVRDACEAGANMIITGAGLPTN-- 133 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG- 215 P +NF ++ + I ++SSA + +L K M + G Sbjct: 134 ----MPEFTSNFPNV-ALIPIVSSAKALKILCKRWEGRYKRM---------PDAVIVEGP 179 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG E E + + P LE ++ + E IA+GG+ + DI Sbjct: 180 LSGGHQGVSYEDCFKPEYQLESIV-------PEVLEESKKW-GEIPIIAAGGIWDRADID 231 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 K I LGAS + + FL + + + ++KE Sbjct: 232 KMIKLGASGVQMGTRFLGASECDARYYNELMPKIKKE 268 >gi|15901110|ref|NP_345714.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae TIGR4] gi|111658428|ref|ZP_01409107.1| hypothetical protein SpneT_02000399 [Streptococcus pneumoniae TIGR4] gi|45476967|sp|Q97QG5|GUAC_STRPN RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|14972731|gb|AAK75354.1| guanosine monophosphate reductase [Streptococcus pneumoniae TIGR4] Length = 328 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 98/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVSQLKADTPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|313682251|ref|YP_004059989.1| glutamate synthase (nadph) large subunit [Sulfuricurvum kujiense DSM 16994] gi|313155111|gb|ADR33789.1| glutamate synthase (NADPH) large subunit [Sulfuricurvum kujiense DSM 16994] Length = 1477 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 35/183 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + + +K V K+ I+G GGT + + S + Sbjct: 1000 NAKVAVKLVSSAGVGTIAAGVAKAYADKIIISGGDGGTGAAPLTSI-----KFAGNPWEL 1054 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------- 291 G+ + GGL+ G DI+K+ +LGA + L Sbjct: 1055 GLSEAHNALKVNNLRGLVHVQTDGGLKTGQDIVKAALLGAESYAFGTGALTIIGCKMLRI 1114 Query: 292 -------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + + ++ L ++ M LG K ++EL + Sbjct: 1115 CHVNKCSVGIATQNEKLRSEYFNGTVEQLINYFTYLAEDVRKIMAQLGYKTIEELVGRSD 1174 Query: 333 LIR 335 L+R Sbjct: 1175 LLR 1177 >gi|284037209|ref|YP_003387139.1| glutamate synthase (ferredoxin) [Spirosoma linguale DSM 74] gi|283816502|gb|ADB38340.1| Glutamate synthase (ferredoxin) [Spirosoma linguale DSM 74] Length = 1524 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 65/209 (31%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLS----SAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+S + D + +K V K+ Sbjct: 987 HSTPGVGLISPPPHHDIYSIEDLAQLISDLKNANRDARISVKLVSEAGVGTIAAGVAKAH 1046 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S R + + G+ + A G Sbjct: 1047 ADHILISGHDGGTGASPLSSIRH-----AGLPWELGLAEAHQTLVRNKLRGRVTVQADGQ 1101 Query: 267 LRNGVDILKSIILGASLGGLASPF---------------------------LKPAMDS-S 298 +R G D+ + +LGA G+A+ L+ Sbjct: 1102 MRTGRDLAIAALLGAEEFGVATAALVATGCIMMRKCHLNTCPVGVATQNKELRALFTGKP 1161 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV L E M LG + + E+ Sbjct: 1162 EHVVNMFTFLAMELREIMAELGFRTINEM 1190 >gi|124514325|gb|EAY55839.1| Glutamate synthase (ferredoxin) [Leptospirillum rubarum] Length = 1522 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 34/275 (12%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV-- 88 + ++ P + + VD G ++P +ISSM+ G+ + R A AA++ + Sbjct: 851 FVPKSSP-VPLESVDLR---AGDH-AYPFIISSMSFGSQGEVAY--RAYAEAAQQMNIIC 903 Query: 89 --------AMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAH 138 +G A F + +L +G + G Sbjct: 904 LNGEGGEIPDLIGKYAHTRGQQIASGRFGVNIALLNSSNILEIKIGQGAKPGEGGHLPGK 963 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGC 193 + + P ++I P+ N + + +A L + + +K Sbjct: 964 KVSEKV---AKARRATPGVDLISPSNNHDLYSIED-LAQLVYELKTANPRARIAVKVPVI 1019 Query: 194 GLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 K+G ++G GGT +R+ + + + + + G+ + Sbjct: 1020 PGIGTIGIGIAKAGADIITVSGFDGGTGAARMHALKYVGLPV-----EIGVSEVHRALLY 1074 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + A GGL++ VD LK + LGA+ G Sbjct: 1075 AGLRDNVEIWADGGLKSSVDALKIMCLGANRVGFG 1109 >gi|17227547|ref|NP_484095.1| inosine 5-monophosphate dehydrogenase [Nostoc sp. PCC 7120] gi|17135029|dbj|BAB77575.1| IMP dehydrogenase [Nostoc sp. PCC 7120] Length = 387 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 62/205 (30%), Gaps = 62/205 (30%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRI 224 +A +M +P++L G ++ LK+G + G G G + Sbjct: 179 LAEFCRSMPIPVIL---GNCVTYEVTLNLLKAGAAAVLVGIGPGAACTSRGVLGVGVPQA 235 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D + +Q+ G N IA GGL G DI K I GA Sbjct: 236 TAIADCAAARDDYYQETG--------------NYIPIIADGGLITGGDICKCIACGADGV 281 Query: 285 GLASPFLKPA-----------------------------------MDSSDAVVAAIESLR 309 + SPF + A + + +L Sbjct: 282 MIGSPFARAAEAPGRGFHWGMATPSPVLPRGTRIRVGTTGTLEQILTGPAGLDDGTHNLL 341 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 342 GALKTSMGTLGAKDIKEMQQVEVVI 366 >gi|289550875|ref|YP_003471779.1| GMP reductase [Staphylococcus lugdunensis HKU09-01] gi|315658376|ref|ZP_07911248.1| GMP reductase [Staphylococcus lugdunensis M23590] gi|289180407|gb|ADC87652.1| GMP reductase [Staphylococcus lugdunensis HKU09-01] gi|315496705|gb|EFU85028.1| GMP reductase [Staphylococcus lugdunensis M23590] Length = 325 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 88/281 (31%), Gaps = 46/281 (16%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D +++F +K P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTAIQFGPRKFKLPVV-------PANMQTVMNEKLAQWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVH 142 + + D + F + L +++ +F +++ QA Sbjct: 58 KNEYF------YIMHRFDEKSRIPF--IKNMHDQGLFASISVGVKAREFDFIEQLQQA-- 107 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIE 201 + + E I + +DL + I + + ++ G + + Sbjct: 108 -----------DIVPEYITIDIAHGHSDLVIRMIKHIKQHLPQAFVI--AGNVGTPEGVR 154 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 +G + G + G W L+ Sbjct: 155 ELENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNLCSKAARKPL 203 Query: 262 IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 IA GG+R DI KSI GAS+ + S F + V Sbjct: 204 IADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVE 244 >gi|23100863|ref|NP_694330.1| glutamate synthase [Oceanobacillus iheyensis HTE831] gi|22779097|dbj|BAC15364.1| glutamate synthase (ferredoxin) [Oceanobacillus iheyensis HTE831] Length = 533 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 94/287 (32%), Gaps = 52/287 (18%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVM----FS 100 D + +G P + S+ G + + + AI A + MA G+ S Sbjct: 163 DDNTVVIGPSSRAPFRVKSLVGMSAMSYGSLGDH-AITALSKGIGMAGGAWMNTGEGGLS 221 Query: 101 DHNAIKS-----------FELRQYAPHTV--------LISNLGAVQLNYDFGVQKAHQAV 141 D++ F +R I + A +L G + V Sbjct: 222 DYHLKGDTDIIAQIGPGLFGVRSKNGEFSWELLKEKAAIPQVKAFELKLAQGAKTRGGHV 281 Query: 142 HVLGADGLFLH---LNPLQEIIQPNGNTNFADLSSK---IALLSSAMDVPLLLK-EVGCG 194 H + P QEI PN F D+ S + + + +P+ +K VG Sbjct: 282 DAEKVTEEIAHIRNVEPYQEINSPNRFNEFDDVPSMFSFMEKIRNHTGLPVGMKIVVGSS 341 Query: 195 LSSMDIELGLK---SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 S +I +K G + + G GGT S E + G+P ++ Sbjct: 342 DSFEEIASYMKESGMGPDFITVDGSEGGTGASFQELADRV-----------GLPVKSAVM 390 Query: 251 MARP------YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + + IASG L I + +GA L +A F+ Sbjct: 391 IVDQTLKKYGVRERTKIIASGKLFTADRIAVVLAMGADLVNVARAFM 437 >gi|325685769|gb|EGD27843.1| dihydroorotate oxidase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 309 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 106/319 (33%), Gaps = 54/319 (16%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V + A Sbjct: 63 SLLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAEILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMVEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIES-----HRDLESDIGIVFQDWG-------IPTPLS 248 + RGG + + H DL++ ++ D+G P + Sbjct: 180 AQAAE----------RGGADGLTLINTLLGLHLDLKTRRPVLGNDFGGLSGQAVKPVAVR 229 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + I GG+ + D + I+ GAS + S + AI+ + Sbjct: 230 MVAQVRQATSLPIIGVGGINSPEDAAEFILAGASAVQIGSMAFHDKL--------AIKHV 281 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + +G V L Sbjct: 282 IDGLPAVLADMGASDVTSL 300 >gi|256843922|ref|ZP_05549409.1| guanosine monophosphate reductase [Lactobacillus crispatus 125-2-CHN] gi|293381377|ref|ZP_06627378.1| guanosine monophosphate reductase [Lactobacillus crispatus 214-1] gi|256613827|gb|EEU19029.1| guanosine monophosphate reductase [Lactobacillus crispatus 125-2-CHN] gi|290922067|gb|EFD99068.1| guanosine monophosphate reductase [Lactobacillus crispatus 214-1] Length = 330 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 89/281 (31%), Gaps = 45/281 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD L+ S + D SV+F + P++ M I+ NLAI A Sbjct: 12 YDDIQLVPNKGIIKSRRDADTSVKFGNRTFKIPVV-------PANMESVIDDNLAIWLAQ 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M + SF ++ + S +G YDF + Sbjct: 65 NDYYYVM-------HRFEPEKRISF-IKMMHQKGLFASISVGIKDSEYDFIDELVK---E 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + + + + I + + L G + + Sbjct: 114 NLKPEYITIDV----------AHGHSVYVIKMIKYIKEKLPDSFLT--AGNIATPEAVRE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M ++ I Sbjct: 162 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRMCSKSASK-PLI 210 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R+ DI KSI GA++ + L +S V+ Sbjct: 211 ADGGIRHNGDIAKSIRFGATMV-MIGSMLAGHEESPGNVIK 250 >gi|227894387|ref|ZP_04012192.1| inosine-5-monophosphate dehydrogenase [Lactobacillus ultunensis DSM 16047] gi|227863757|gb|EEJ71178.1| inosine-5-monophosphate dehydrogenase [Lactobacillus ultunensis DSM 16047] Length = 380 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 88/279 (31%), Gaps = 43/279 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL IS+ G + + Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + V N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQASEVANVKSVVVPSNATKAAVDDQNRLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 +A +L A + ++ + + A + KI + L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIREHFPKQTL 165 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G + +G+ + G+ + + G+P Sbjct: 166 I--AGNVATGDATRALFDAGVDIVKVGIGPGSICTT------------RIVAGVGVPQIT 211 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 212 AIYDAVTAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|331241420|ref|XP_003333358.1| glutamate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312348|gb|EFP88939.1| glutamate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2128 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 HL +I P + + + L+ + + +K V + K+ Sbjct: 1026 HLTAGVGLISPPPHHDIYSIEDLKQLIYDLKCANPRARVSVKLVSEVGVGIVASGVAKAK 1085 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1086 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVCLQTDGQ 1140 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 +R G D+ + +LGA G A+ P L+ Sbjct: 1141 IRTGRDVAIAALLGAEEFGFATTPLIAMGCIMMRRCHQNTCPVGVATQDPVLRAKFTGQP 1200 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG + + E+ T L++ Sbjct: 1201 EHVINFFYYVAEELRTHMAKLGFRTLNEMVGRTDLLK 1237 >gi|300362293|ref|ZP_07058469.1| GMP reductase [Lactobacillus gasseri JV-V03] gi|300353284|gb|EFJ69156.1| GMP reductase [Lactobacillus gasseri JV-V03] Length = 324 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 42/267 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D SV+F + P++ M I+ +LAI + Sbjct: 6 YDDIQLVPNKCIIKSRKEADTSVKFGSRTFKIPVV-------PANMESVIDDDLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNYDFGVQKAHQAVHV 143 + F + L +++ G YDF A Sbjct: 59 NG-----YYYVMHRFYPEKRADF--IKMMHDKGLFASISVGIKDSEYDFIDYLAK---EK 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + + + +G++++ + I + + L G + + Sbjct: 109 IIPEYITIDV--------AHGHSDY--VIKMIKYIKDKLPDTFLT--AGNIATPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L M + IA Sbjct: 157 ENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KS+ GAS+ + S F Sbjct: 206 DGGIRHNGDIAKSVRFGASMVMIGSLF 232 >gi|224438388|ref|ZP_03659315.1| inosine 5'-monophosphate dehydrogenase [Helicobacter cinaedi CCUG 18818] gi|313144830|ref|ZP_07807023.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818] gi|313129861|gb|EFR47478.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818] Length = 481 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 33/245 (13%) Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVL 119 LI++ G + + I K+ + + IK + R P++ Sbjct: 157 LITAKVGTTLEEAKEIMHK----HRIEKLPIV--DENYTLKGLITIKDIQKRIEYPNSCK 210 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS 179 S G +++ GV++ +A + A L L+ + + ++ + ++ Sbjct: 211 DS-FGRLKVGAAIGVKQFDRAEALTNAGADVLVLDSA--------HGHSINVLKTLEMIK 261 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 S + + ++ VG ++ + +G + G+ + + Sbjct: 262 SKLAIDVV---VGNVVTPEATRDLINAGADGVKVGIGPGSICTT------------RIVA 306 Query: 240 DWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 G+P ++E + IA GG++ DI K++ +GAS + L +S Sbjct: 307 GVGMPQISAIESCAEVARKHNVPLIADGGIKYSGDIAKALAVGASCV-MIGSLLAGTEES 365 Query: 298 SDAVV 302 ++ Sbjct: 366 PGDLI 370 >gi|116629060|ref|YP_814232.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus gasseri ATCC 33323] gi|282852765|ref|ZP_06262107.1| GMP reductase [Lactobacillus gasseri 224-1] gi|122273942|sp|Q045S8|GUAC_LACGA RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|116094642|gb|ABJ59794.1| IMP dehydrogenase/GMP reductase [Lactobacillus gasseri ATCC 33323] gi|282556507|gb|EFB62127.1| GMP reductase [Lactobacillus gasseri 224-1] Length = 330 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 88/267 (32%), Gaps = 42/267 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D SV+F + P++ M I+ +LAI + Sbjct: 12 YDDIQLVPNKCIIKSRKEADTSVKFGSRTFKIPVV-------PANMESVIDDDLAIWLAE 64 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNYDFGVQKAHQAVHV 143 + +F + L +++ G YDF A Sbjct: 65 NG-----YYYVMHRFHPEKRANF--IKMMHDKGLFASISVGIKDSEYDFIDYLAK---EK 114 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + + + + + +G++++ + I + + L G + + Sbjct: 115 IIPEYITIDV--------AHGHSDY--VIKMIKYIKDKLPDTFLT--AGNIATPEAVREL 162 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L M + IA Sbjct: 163 ENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIA 211 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KS+ GAS+ + S F Sbjct: 212 DGGIRHNGDIAKSVRFGASMVMIGSLF 238 >gi|309800541|ref|ZP_07694691.1| guanosine monophosphate reductase [Streptococcus infantis SK1302] gi|308115834|gb|EFO53360.1| guanosine monophosphate reductase [Streptococcus infantis SK1302] Length = 286 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D V P++ + M ++ ++A Sbjct: 10 YEDIQLIPNKCVLQSRAEADTHVTLGKHTFKLPVV-------PSNMQTILDEDVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEEGRIPFVKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GAS+ + S F V + ++ Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTVEVDGKQFKE 254 >gi|158335029|ref|YP_001516201.1| inosine 5-monophosphate dehydrogenase [Acaryochloris marina MBIC11017] gi|158305270|gb|ABW26887.1| IMP dehydrogenase [Acaryochloris marina MBIC11017] Length = 387 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 77/261 (29%), Gaps = 78/261 (29%) Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIA 176 A G K QAV GAD F+ H++P E + P F Sbjct: 133 AAVSATPIGASKFGQAVVDAGADLFFIQATVVSTDHVSP--ESVTPLDLAKF-------- 182 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + +P+++ G ++ + +++G + G + + R + Sbjct: 183 --CQDLPIPVVM---GNCVTYEVTKSLMQAGAAAVLVGIGPGAACTT----RGVL----- 228 Query: 237 VFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLAS 288 G+P ++ ++ IA GGL G D+ K I GA + S Sbjct: 229 ---GVGVPQATAISDCAAARDDHFRETNQYIPIIADGGLITGGDVCKCIACGADAIMMGS 285 Query: 289 PFLKPA-----------------------------------MDSSDAVVAAIESLRKEFI 313 P + A + + + Sbjct: 286 PIARAAEAPGRGFHWGMATPSPVLPRGTRIRVGTTGTLEQILRGPAQLDDGTHNFLGSLQ 345 Query: 314 VSMFLLGTKRVQELYLNTALI 334 SM LG K ++++ ++ Sbjct: 346 TSMGTLGAKDIKQMQQVEVVV 366 >gi|126699694|ref|YP_001088591.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile 630] gi|255101208|ref|ZP_05330185.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-63q42] gi|115251131|emb|CAJ68962.1| Dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile] Length = 361 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 103/312 (33%), Gaps = 70/312 (22%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA---------EKTKVA--MAVGSQRV 97 FLGK+L PL+I S + +I + A A M + Sbjct: 3 NFLGKELKSPLIIGSGPLTYSAAGCKILSDAGAGAVVTKTIRKERAINPAPHMVRNTANA 62 Query: 98 MFSD-------HNAIKSFELRQYAPHTVL-ISNLGAVQLNYDFGVQKAHQAVHVL---GA 146 + ++ FE+ Q + I+++G ++++ + V + GA Sbjct: 63 LLNNEKWTDFEPEQWIDFEIPQMKRDGTVCIASIG-------HTIEESSELVEKVANAGA 115 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGLK 205 D + E++ + ++ DL + +++P+++K D + + Sbjct: 116 DFI--------ELV----SYDYRDLIPMLKDAKERVNIPVIVKLPPMIDEIGDFAKKLEE 163 Query: 206 SGIRYFDIAGRGGTSWSRI-ESHRDLESDIGIVFQDWGI----------PTPLSLEMARP 254 +G T+ + + R + GI T + + Sbjct: 164 AGADAI-------TACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQRIYEIKK 216 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGL-ASPFLKPAMDSSDAVVAAIESLRKEFI 313 I GG +G D L+ I+ GA G+ + LK A I + + Sbjct: 217 -QVNIPIIGLGGCVSGDDALEMIMAGADFVGICSVVILKGA--------QVISKIHDDLK 267 Query: 314 VSMFLLGTKRVQ 325 ++ LG ++ Sbjct: 268 SNLNRLGYNTIE 279 >gi|289168053|ref|YP_003446322.1| GMP reductase [Streptococcus mitis B6] gi|288907620|emb|CBJ22457.1| GMP reductase [Streptococcus mitis B6] Length = 328 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGKHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GA++ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGANMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|218262756|ref|ZP_03477114.1| hypothetical protein PRABACTJOHN_02793 [Parabacteroides johnsonii DSM 18315] gi|218223158|gb|EEC95808.1| hypothetical protein PRABACTJOHN_02793 [Parabacteroides johnsonii DSM 18315] Length = 325 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 96/294 (32%), Gaps = 33/294 (11%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGS 94 +D ++ G L PL++ S +G N N+ A + ++ M Sbjct: 2 IDIKTQYAGLTLRNPLIVGS-SGLTNNAER--NKEFEKAGAGAIVLKSLFEEQIEMQSDV 58 Query: 95 QRVMFSDHNAIK------------SF----ELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A S+ + + +I+++ + D V+ A Sbjct: 59 LMQESDYPEAADYIRGYVKANQINSYLELIQKTKELCTIPVIASINCYK--SDAWVEFAR 116 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC-GLSS 197 Q + + GAD L L++ L+ + N + + I + + +P+++K G Sbjct: 117 Q-IELAGADALELNVFFLETDLTYNSDNMRDLYVNIIRKVKETVSIPVMIKMSKMVGNIP 175 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 +G + R I + + + ++ D T + Sbjct: 176 AVAHTLTVNGADGIVLFNRFYQPDIDINNMQIVSGNVFSNHSDLS-DTLRWTAIVSGKIP 234 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 +S G+ + D++K ++ GA + S + V+ IE + Sbjct: 235 GISIASSTGVHDWEDVIKCLLAGADAVQMCSAVYTHGAEIISQVLTCIEEWMHQ 288 >gi|94500406|ref|ZP_01306938.1| Glutamate synthase domain 2 [Oceanobacter sp. RED65] gi|94427441|gb|EAT12419.1| Glutamate synthase domain 2 [Oceanobacter sp. RED65] Length = 1482 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 996 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIKYAGSPFELGLAE---- 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 A + GGL+ G+DI+K+ ILGA G + + Sbjct: 1052 -AHQALRANDLRGNVRLQTDGGLKTGLDIVKAAILGAESFGFGTTPMVAMGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + V + +E M LG + ++EL T L+ Sbjct: 1111 NNCATGVATQNDELREKHFIGTVEMVKNFFRFVAEETRQWMAALGVRTLEELVGRTDLLE 1170 >gi|2695919|emb|CAA10974.1| glutamate synthase [Ochromonas danica] Length = 409 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+G I+G GGT S S + S + G+ Sbjct: 22 VSVKLVSEEGIGTVASGVAKAGADIIQISGHDGGTGASPAASIKHAGSP-----WELGLV 76 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 S+ + A GGL++G D++ + +GA G + L Sbjct: 77 EAHSVLRKNGLRDRVLLRADGGLKSGWDVVMAAAMGAEEYGFGTIALIAEGCIMARICHT 136 Query: 292 ---------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K + + + VV + + +E + LG + ++E+ L++ Sbjct: 137 NKCPVGVTTQNEALRKRFVGTPEHVVTFFQFVAEEVRHILAKLGYRSLEEIIGRPGLLQP 196 Query: 337 Q 337 + Sbjct: 197 R 197 >gi|73960011|ref|XP_537061.2| PREDICTED: similar to Dihydropyrimidine dehydrogenase [NADP+] precursor (DPD) (DHPDHase) (Dihydrouracil dehydrogenase) (Dihydrothymine dehydrogenase) [Canis familiaris] Length = 1074 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 115/366 (31%), Gaps = 83/366 (22%) Query: 34 RALPEISF-----DEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIER 74 A PE+ D VD SVE G K P ++S T G + + Sbjct: 564 CAKPELPLFYTPIDLVDISVEMAGLKFLNPFGLASATPATSASMIRRAFEAGWGFALTKT 623 Query: 75 INRNLAIAAE-KTKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHT 117 + + I ++ M Q + ++ EL+ P Sbjct: 624 FSLDKDIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPGN 683 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTN 167 ++I+++ D+ + + GAD L L+L+ + + P N Sbjct: 684 IVIASIMCSYSKNDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRN 741 Query: 168 FADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RG 217 + A+ +P K + I + G ++G Sbjct: 742 ICRW------VRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKAD 795 Query: 218 GTSWSR--IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GT W IE G + + S+ A +A+GG+ + L+ Sbjct: 796 GTPWPAVGIEKRTTYGGVSGTAIRPIALRAVTSIARA---LPGFPILATGGIDSAESGLQ 852 Query: 276 SIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNT 331 + GAS+ + A+ + D V I+ ++L K ++EL + Sbjct: 853 FLHSGASVLQVC-----SAVQNQDFTV--IQDYCTGLKALLYL---KSIEELRDWDGQSP 902 Query: 332 ALIRHQ 337 A + HQ Sbjct: 903 ATVSHQ 908 >gi|118377270|ref|XP_001021815.1| Dihydroorotate dehydrogenase family protein [Tetrahymena thermophila] gi|89303582|gb|EAS01570.1| Dihydroorotate dehydrogenase family protein [Tetrahymena thermophila SB210] Length = 1080 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 107/340 (31%), Gaps = 66/340 (19%) Query: 36 LPE--ISFDEVDPSVEFLGKKLSFPLLISSMTGGNN----KMIERINRNLAIAA------ 83 LP D+VD S E G K+ P ++S + I + A+ Sbjct: 610 LPGFYTEIDDVDISTEICGVKMENPFGLASAPPTTSYPMIARSFDIGYDFAVVKTAVLDK 669 Query: 84 --------EKTKVA-----MAVGSQRVMFSDHNA----IKSFELRQYAPHTVLISNLGAV 126 KV + S+ + + ++++ P+ VLI +L A Sbjct: 670 DTVFNVSPRIFKVPDPLRQECSYGNIELVSEKSLKYWVEGAKQIKKDYPNKVLIGSLMAA 729 Query: 127 ---QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI-ALLSSAM 182 Q D Q ++ + H + E D+ I + ++S Sbjct: 730 YNQQDWIDIMHQVKDAPFDMIELNLSCPHG--MNEKGMGRACGEDPDIVRDITSWVTSQT 787 Query: 183 DVPLLLKEV-GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 +P+++K G + + + + G + + + D D G F Sbjct: 788 KIPIIVKITPNYGQAEILAKAAYEGGAKAVTLTN-------TMPGLVDPYPD-GESFNGV 839 Query: 242 GI--------PTPLSLE--------MARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 G+ T L + E ASGG+ +G + + GA Sbjct: 840 GVEKNVAPGGSTGSILRPFAMRKCVDVAKFVPEIDIFASGGIISGDHGINYLHYGAKALQ 899 Query: 286 LASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + A+ + DA L+ +M+ +++++ Sbjct: 900 IC-----SAVQNLDA-ATVFYDLKTSLQANMYANSSQKLK 933 >gi|170016946|ref|YP_001727865.1| IMP dehydrogenase/GMP reductase [Leuconostoc citreum KM20] gi|169803803|gb|ACA82421.1| IMP dehydrogenase/GMP reductase [Leuconostoc citreum KM20] Length = 326 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 114/331 (34%), Gaps = 60/331 (18%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLL--ISSMTGGNNKMIERINRN 78 +D L+ LP V + G L+ PL+ + N + +N Sbjct: 11 GYDQVLLVPGASNVLPHT----VSLATRLADGFVLNMPLVSEANGTATDNRVVATALNGG 66 Query: 79 LAIAAEKTKVA--MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 L + AE+ +A MAV S N + P+ + G V++ + + Sbjct: 67 LGVVAEQEDIAAQMAVISAAKATEVDN--------EKYPNAFVDDK-GRVRVAAEVWLTT 117 Query: 137 AHQA-VHVL---GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 QA V L GAD +F +L Q+ + N + + + A L VG Sbjct: 118 GAQARVDKLVAAGADAIFFYL---QDDLNQETN-------AIVKAVRKAFPKTFLA--VG 165 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 + G+ G S + L ++ F + T +++ Sbjct: 166 AVEDQGIAGALYQDGVDAVIA----GRSVNSP-----LPNNALYPF----LTTTMAIAEV 212 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV----AAIESL 308 ++ IASGG+ D++K+I GA L + LK + +D +I+ Sbjct: 213 ASEFDK-TVIASGGVHYSGDVVKAISAGADAI-LVTDLLKGEVLEADGTFVGGDMSIDDA 270 Query: 309 RKE----FIVSMFLLGTKRVQELYLNTALIR 335 + M G+ + +L L ++ Sbjct: 271 IFQADGGLRAGMGYTGSSTILDLKLGAQFVQ 301 >gi|67922143|ref|ZP_00515658.1| Dihydroorotate dehydrogenase [Crocosphaera watsonii WH 8501] gi|67856043|gb|EAM51287.1| Dihydroorotate dehydrogenase [Crocosphaera watsonii WH 8501] Length = 345 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 107/308 (34%), Gaps = 57/308 (18%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINR----NLAIAAE---------------- 84 D + +LG L PL++ G + E I+ A AA Sbjct: 2 DLTTTYLGMTLKSPLVV----GSCAPLTEDIDNIKRMEDAGAAAVVLHSFFEEQLRREQL 57 Query: 85 --KTKVAMAVGSQRVMFSD-----------HNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 + S S ++ + + +I++L L Sbjct: 58 ELHHHLTYGTESFAEALSYFPEPEIFHIGSEEYLEHIRISKEELDIPVIASLNGSTLGGW 117 Query: 132 FGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 Q + GAD L L++ ++ P G + + + S +++P+ +K Sbjct: 118 LDYS---QQIEQAGADALELNIYYVPTDLDIPGGEIE-QNYLDILKAVKSEINIPVAIKL 173 Query: 191 VGCGLSSMDI-ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + ++ + ++G + R + + D++ + V+ + + TP SL Sbjct: 174 SPYFSNIANMTKRLGEAGADGLVLFNR----FYQP----DIDLNNLEVYPNVLLSTPQSL 225 Query: 250 EMARPY------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + + EA ++ G+ + D++K ++ GA + + S L+ + + Sbjct: 226 RLPMRWIAILYGKIEADLASTSGIHHASDVIKMVMAGAKITQVVSALLRHGIHYLATLEE 285 Query: 304 AIESLRKE 311 AI+ +E Sbjct: 286 AIQKWMEE 293 >gi|159138307|gb|ABW89156.1| glycolate oxidase [Helianthus annuus] gi|159138309|gb|ABW89157.1| glycolate oxidase [Helianthus annuus] gi|159138311|gb|ABW89158.1| glycolate oxidase [Helianthus annuus] gi|159138313|gb|ABW89159.1| glycolate oxidase [Helianthus annuus] gi|159138315|gb|ABW89160.1| glycolate oxidase [Helianthus annuus] gi|159138317|gb|ABW89161.1| glycolate oxidase [Helianthus annuus] gi|159138319|gb|ABW89162.1| glycolate oxidase [Helianthus annuus] gi|159138321|gb|ABW89163.1| glycolate oxidase [Helianthus annuus] gi|159138323|gb|ABW89164.1| glycolate oxidase [Helianthus annuus] gi|159138325|gb|ABW89165.1| glycolate oxidase [Helianthus annuus] gi|159138327|gb|ABW89166.1| glycolate oxidase [Helianthus annuus] gi|159138329|gb|ABW89167.1| glycolate oxidase [Helianthus annuus] gi|159138331|gb|ABW89168.1| glycolate oxidase [Helianthus annuus] gi|159138333|gb|ABW89169.1| glycolate oxidase [Helianthus annuus] gi|159138335|gb|ABW89170.1| glycolate oxidase [Helianthus annuus] gi|159138339|gb|ABW89172.1| glycolate oxidase [Helianthus annuus] gi|159138341|gb|ABW89173.1| glycolate oxidase [Helianthus annuus] gi|159138343|gb|ABW89174.1| glycolate oxidase [Helianthus annuus] Length = 100 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 22/102 (21%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 + L + +P+L+K V +++ D L +++G ++ G + + Sbjct: 20 WKDVKWLQTITTMPILVKGV---ITAEDTRLAIQAGAAGIIVSNHGARQLDYVPA----- 71 Query: 232 SDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVD 272 T ++LE + GG+R G D Sbjct: 72 -------------TIMALEEVVKAAQGRVPVFLDGGVRRGTD 100 >gi|260802504|ref|XP_002596132.1| hypothetical protein BRAFLDRAFT_66139 [Branchiostoma floridae] gi|229281386|gb|EEN52144.1| hypothetical protein BRAFLDRAFT_66139 [Branchiostoma floridae] Length = 314 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 +W +E R+ + + +V + GI + + ++ R +A+ GG+R G D+LK++ L Sbjct: 181 TWEDVEWVRE-NTRLPVVLK--GILSDVLPDIVRAVDGKAEVYLDGGVRTGTDVLKALAL 237 Query: 280 GASLGGLASPFLKPAMD 296 GA + P L Sbjct: 238 GARCVFIGRPALWGLAH 254 >gi|227535620|ref|ZP_03965669.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186750|gb|EEI66817.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 339 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 84/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 20 YEDIQMIPNKCVVQSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 72 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 73 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDDEFDFIEALAANE-L 123 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + ++ Q + I + + ++ G + + Sbjct: 124 TPDY--ITIDVAHGYAQV--------VIDMIQHIKHYLPNAFVI--AGNVGTPEAVRELE 171 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 172 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 220 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 221 GGIRNNGDIAKSIRFGATMCMIGSLF 246 >gi|77361825|ref|YP_341400.1| glutamate synthase GltB [Pseudoalteromonas haloplanktis TAC125] gi|76876736|emb|CAI87958.1| putative Glutamate synthase GltB [Pseudoalteromonas haloplanktis TAC125] Length = 493 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 44/297 (14%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGG--NNKMIERINR--N 78 ++ A P + + +DPS LG P IS M+ G + + +++ Sbjct: 110 VMFMNCAFPTLDEEALDPSNVTLGPYCKTPYTTNSIFNISGMSFGALSKPAVRALSKGAK 169 Query: 79 LAIAAEKTK--------------VAMAVGSQRVMFSDHNA-IKSFELRQYAPHTVLISNL 123 LA T + +G+ + D N + + +L++ A H + + Sbjct: 170 LAGCWYNTGEGGLSPYHLEGGGDIVFQIGTAKYGVRDDNGNLSTAKLKEIAAHEQV--KM 227 Query: 124 GAVQLNYDFGVQKAHQAV-HVLGADGLFLHLNP-LQEIIQPNGN---TNFADLSSKIALL 178 ++L+ K + A+ + P Q+ I PNG+ +D+ +A + Sbjct: 228 FEIKLSQGAKPGKGGMLPGRKVNAEIAKIRGIPEGQDSISPNGHLEIKKPSDILDMLATV 287 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELG------LKSGIRYFDI-AGRGGTSWSRIESHRDLE 231 +A P K V + ++ ++S + I + GGT + + L Sbjct: 288 RNATGKPTGFKAVIGEYTWLETLFAEINHRGIESAPDFITIDSADGGTGAA----PQSLL 343 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 +G+ ++ +P ++L + IASG L + ++ LGA A Sbjct: 344 DSVGLPLRE-SLPLVINLLEKHGLRERVKVIASGKLIVPSKVAWALALGADFVVSAR 399 >gi|149002617|ref|ZP_01827549.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP14-BS69] gi|225856915|ref|YP_002738426.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae P1031] gi|237649949|ref|ZP_04524201.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae CCRI 1974] gi|237822502|ref|ZP_04598347.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae CCRI 1974M2] gi|254800140|sp|C1CKY8|GUAC_STRZP RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|147759228|gb|EDK66221.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP14-BS69] gi|225725312|gb|ACO21164.1| guanosine monophosphate reductase [Streptococcus pneumoniae P1031] gi|332201712|gb|EGJ15782.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA47368] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVRQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|259502022|ref|ZP_05744924.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus antri DSM 16041] gi|259170023|gb|EEW54518.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus antri DSM 16041] Length = 380 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 99/300 (33%), Gaps = 46/300 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EV+ S + KL+ PL+ + M T G Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVNLSTQLAKNIKLNIPLISAGMDTVTEGP 60 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAVQ 127 + + L + + M++ +Q ++ +KS + A + N Sbjct: 61 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVVVPANATKAAVDGHNRLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPL 186 +A +L A + ++ + + A + KI + D L Sbjct: 114 AAVGVTSDTFERATALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPDATL 165 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 + V G + +G+ + G+ + V G+P Sbjct: 166 IAGNVATG---EATKALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 ++ A E IA GG++ D++K++ G + + L ++ V Sbjct: 211 TAIYDAASVAREYGKPIIADGGIKYSGDVVKALAAGGNAV-MLGSMLSGTTEAPGEVFEE 269 >gi|256848522|ref|ZP_05553964.1| guanosine monophosphate reductase [Lactobacillus coleohominis 101-4-CHN] gi|256714789|gb|EEU29768.1| guanosine monophosphate reductase [Lactobacillus coleohominis 101-4-CHN] Length = 324 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 91/280 (32%), Gaps = 45/280 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD LI S E D SV+F +K P++ M I+ +LA+ A Sbjct: 6 YDDIQLIPNKCIIKSRKEADTSVQFGPRKFKIPVV-------PANMASVIDEDLAVWLAQ 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M F +R + S +G YDF + Sbjct: 59 NDYYYVM-------HRFAPETRADF-VRHMHDRGLFASISVGIKDSEYDF--------ID 102 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L ++ HL P E I + +D K+ +P G + + Sbjct: 103 QLKSE----HLVP--EYITIDVAHGHSDFVIKMIQYIKK-QLPESFVTAGNVATPEAVRD 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L + + I Sbjct: 156 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRLCSKAARK-PLI 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R+ DI KS+ GAS+ + L ++S V+ Sbjct: 205 ADGGIRHNGDIAKSVRFGASMV-MIGSMLAGHLESPGHVI 243 >gi|158295729|ref|XP_316385.4| AGAP006360-PA [Anopheles gambiae str. PEST] gi|157016176|gb|EAA10819.4| AGAP006360-PA [Anopheles gambiae str. PEST] Length = 2076 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + +K V + K Sbjct: 1016 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGK 1075 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I+S + + GI + + + A Sbjct: 1076 AEHIVISGHDGGTGASSWTGIKS--------AGLPWELGIAETHQVLVLNDLRSRVVVQA 1127 Query: 264 SGGLRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMD 296 G LR G D++ + +LGA G ++ P L+ Sbjct: 1128 DGQLRTGFDVVVAALLGADEFGFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRAKFA 1187 Query: 297 S-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ L +E M LG +R QEL + L++ Sbjct: 1188 GKPEHVINYFFMLAEEIREIMAELGLRRFQELIGRSDLLK 1227 >gi|206900764|ref|YP_002250161.1| oxidoreductase, 2-nitropropane dioxygenase family [Dictyoglomus thermophilum H-6-12] gi|206739867|gb|ACI18925.1| oxidoreductase, 2-nitropropane dioxygenase family [Dictyoglomus thermophilum H-6-12] Length = 357 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 29/263 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA-IAAEKTKVAMAVGSQRVMFSDHNAI 105 S++ S P++ M G + LA AE+ + +G+ + + + Sbjct: 5 SLKIGNLIASVPIVQGGMAVGISLSG------LASAVAEEGGIG-VIGTAGIGMEEEDFF 57 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 ++F + +N+ A++ +K + V L + ++ ++ + Sbjct: 58 ENF----------IEANIRALRKEIRKAKEKTKGIIGVNILVALSNFADMVKTALEEKID 107 Query: 166 TNFADL---SSKIALLSSAMD---VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RG 217 F+ L VP++ + + + F + G G Sbjct: 108 IIFSGAGLPLDLPKYLKKGDKTKLVPIVSSGRAARIIAKNWIEKYNYIPDAFVVEGPLAG 167 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + E +D E + ++ + LE Y E IA GG+ +G DI K + Sbjct: 168 GHLGFKKEELKDPEITLESRLKEV-LDEVKILEE--KYDKEIPVIAGGGIYDGKDIAKFL 224 Query: 278 ILGASLGGLASPFLKPAMDSSDA 300 LGA +A+ F+ +D Sbjct: 225 KLGAKGVQMATRFVATYECDADE 247 >gi|52424829|ref|YP_087966.1| inositol-5-monophosphate dehydrogenase [Mannheimia succiniciproducens MBEL55E] gi|52306881|gb|AAU37381.1| GuaB protein [Mannheimia succiniciproducens MBEL55E] Length = 487 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 63/221 (28%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++P++ G ++ +G + G+ + Sbjct: 256 GVLQRVRETRAKYPNLPIVA---GNIATAEGAIALADAGASAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S A IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAISDAAAALEGRGIPVIADGGIRFSGDIAKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEIELYQGRSYKSYRGMGSLSAMSQGSSDRYFQSDNAADKLVPEGIEGR 420 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 +A ++ + + M L G+ +++L + +R Sbjct: 421 IAYKGLLKDIIHQQMGGLRSCMGLTGSATIEDLRTKSQFVR 461 >gi|51038613|ref|YP_063259.1| inositol-5-monophosphate dehydrogenase [Borrelia garinii PBi] gi|51036286|gb|AAT93749.1| IMP dehydrogenase [Borrelia garinii PBi] Length = 404 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 106/317 (33%), Gaps = 68/317 (21%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI R LP EV + L+ P L S+M T ++M I Sbjct: 12 FDDVSLIPRKSSILP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAI----- 62 Query: 81 IAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 A++ + + + + + +K++++++ + +N D Q Sbjct: 63 --AKEGGIGIIHKNMSIEAQKKEIEKVKTYKVQK------------TININKDINEQTTK 108 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFA-------------DLSSKIALLSSAMDVP 185 + + ++ N ++ PN + D ++ L A V Sbjct: 109 MLLEKQHLEESKIYKNAERKEDFPNACKDLNSRLRVGAAVSIDIDTLERVEELVKA-HVD 167 Query: 186 LLLKEVGCGLSSMDIELGLKSG---IRYFDIAGRGGTSWSRIESHRDLESDIGIVF---- 238 +L+ + G S+ IEL IAG + E+ DL + Sbjct: 168 ILVIDSAHGHSTRIIELVQTIKNKYPSLDLIAG----NIVTKEAALDLINVGADCLKVGI 223 Query: 239 -----------QDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGG 285 G+P ++ C IA GG+R D++K+I GA Sbjct: 224 GPGSICTTRIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 Query: 286 LASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 284 IGNLFAGVKESPSEEII 300 >gi|330445253|ref|ZP_08308905.1| inosine-5'-monophosphate dehydrogenase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489444|dbj|GAA03402.1| inosine-5'-monophosphate dehydrogenase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 487 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I +A ++P++ V ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRAAFPNLPIVGGNVA---TAEGARALIEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A ++ IA GG+R D+ K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAISEAASVADQYGIPVIADGGIRFSGDMCKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVELYQGRAYKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + SM L G+ +++L +R Sbjct: 421 VAYKGHMKEIVHQQMGGLRSSMGLTGSATIEDLRTKAEFVR 461 >gi|308050449|ref|YP_003914015.1| inosine-5'-monophosphate dehydrogenase [Ferrimonas balearica DSM 9799] gi|307632639|gb|ADN76941.1| inosine-5'-monophosphate dehydrogenase [Ferrimonas balearica DSM 9799] Length = 487 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 57/220 (25%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I A ++ G ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRQAFPHIQIVG--GNVATAAGALALIEAGVDAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P ++ A CN+ IA GG+R DI K++ GAS Sbjct: 308 ------RIVTGVGVPQITAVAEAAAVCNQHGVPVIADGGIRFSGDIAKALAAGASCVMAG 361 Query: 288 SPFL---------------------------------------------KPAMDSSDA-- 300 F K + + Sbjct: 362 GLFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMTKGSSDRYFQTDNAADKMVPEGIEGRI 421 Query: 301 -----VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I M L G ++EL +R Sbjct: 422 PYKGKLKEIIHQQMGGLRSCMGLTGCATIEELRTKAEFVR 461 >gi|296536313|ref|ZP_06898425.1| glutamate synthase alpha subunit [Roseomonas cervicalis ATCC 49957] gi|296263362|gb|EFH09875.1| glutamate synthase alpha subunit [Roseomonas cervicalis ATCC 49957] Length = 1512 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 34/180 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT S + S + + G+ Sbjct: 1030 VCVKLVSRSGIGTIAAGVAKAKADAILVSGHSGGTGASPVSSI-----KYAGLPWEMGLS 1084 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + + + GGL+ G D++ + +LGA G+ + L Sbjct: 1085 EAHQVLLLNRLRHRVKLRTDGGLKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHS 1144 Query: 292 ---------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K S + V+ + +E + LG ++++E+ T ++ Sbjct: 1145 NTCPVGVCTQDEELRKKFEGSPEKVINLFSFIAEEIREILAGLGFRKLEEVIGRTEYLKQ 1204 >gi|149012301|ref|ZP_01833370.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP19-BS75] gi|182684024|ref|YP_001835771.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae CGSP14] gi|303254256|ref|ZP_07340365.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS455] gi|303258884|ref|ZP_07344863.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP-BS293] gi|303261567|ref|ZP_07347514.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP14-BS292] gi|303264238|ref|ZP_07350158.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS397] gi|303266131|ref|ZP_07352024.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS457] gi|303268142|ref|ZP_07353942.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS458] gi|226739805|sp|B2IPN4|GUAC_STRPS RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|147763627|gb|EDK70562.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP19-BS75] gi|182629358|gb|ACB90306.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae CGSP14] gi|302598750|gb|EFL65787.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS455] gi|302637147|gb|EFL67635.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP14-BS292] gi|302639827|gb|EFL70283.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP-BS293] gi|302642359|gb|EFL72706.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS458] gi|302644301|gb|EFL74555.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS457] gi|302646050|gb|EFL76277.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae BS397] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEVGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKVARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|75908865|ref|YP_323161.1| inosine 5-monophosphate dehydrogenase [Anabaena variabilis ATCC 29413] gi|75702590|gb|ABA22266.1| IMP dehydrogenase related 2 [Anabaena variabilis ATCC 29413] Length = 387 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 58/202 (28%), Gaps = 56/202 (27%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------GTSWSRIESH 227 +A +M +P++L G ++ LK+G + G G G + Sbjct: 179 LAEFCRSMPIPVIL---GNCVTYEVTLNLLKAGAAAVLVGIGPGAACTSRGVLGVGVPQA 235 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + R N IA GGL G DI K I GA + Sbjct: 236 TAIADCAAARDDYY-----------RETGNYIPIIADGGLITGGDICKCIACGADGVMIG 284 Query: 288 SPFLKPA-----------------------------------MDSSDAVVAAIESLRKEF 312 SPF + A + + +L Sbjct: 285 SPFARAAEAPGRGFHWGMATPSPVLPRGTRIRVGTTGTLEQILTGPAGLDDGTHNLLGAL 344 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 345 KTSMGTLGAKDIKEMQQVEVVI 366 >gi|15903171|ref|NP_358721.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae R6] gi|116516265|ref|YP_816577.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae D39] gi|148985145|ref|ZP_01818384.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP3-BS71] gi|148989272|ref|ZP_01820652.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP6-BS73] gi|148998681|ref|ZP_01826120.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP11-BS70] gi|168491169|ref|ZP_02715312.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC0288-04] gi|168575704|ref|ZP_02721619.1| guanosine monophosphate reductase [Streptococcus pneumoniae MLV-016] gi|225859043|ref|YP_002740553.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae 70585] gi|307067897|ref|YP_003876863.1| IMP dehydrogenase/GMP reductase [Streptococcus pneumoniae AP200] gi|45476925|sp|Q8DPJ7|GUAC_STRR6 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|122278537|sp|Q04K71|GUAC_STRP2 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|254800136|sp|C1C7M7|GUAC_STRP7 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|15458756|gb|AAK99931.1| GMP reductase [Streptococcus pneumoniae R6] gi|116076841|gb|ABJ54561.1| guanosine monophosphate reductase [Streptococcus pneumoniae D39] gi|147755518|gb|EDK62566.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP11-BS70] gi|147922590|gb|EDK73708.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP3-BS71] gi|147925250|gb|EDK76329.1| guanosine monophosphate reductase [Streptococcus pneumoniae SP6-BS73] gi|183574413|gb|EDT94941.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC0288-04] gi|183578337|gb|EDT98865.1| guanosine monophosphate reductase [Streptococcus pneumoniae MLV-016] gi|225720401|gb|ACO16255.1| guanosine monophosphate reductase [Streptococcus pneumoniae 70585] gi|301800169|emb|CBW32774.1| GMP reductase [Streptococcus pneumoniae OXC141] gi|306409434|gb|ADM84861.1| IMP dehydrogenase/GMP reductase [Streptococcus pneumoniae AP200] gi|332074859|gb|EGI85331.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA41301] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|315037453|ref|YP_004031021.1| inosine-5-monophosphate dehydrogenase [Lactobacillus amylovorus GRL 1112] gi|312275586|gb|ADQ58226.1| inosine-5-monophosphate dehydrogenase [Lactobacillus amylovorus GRL 1112] Length = 380 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 87/279 (31%), Gaps = 43/279 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL IS+ G + + Sbjct: 5 DTKFTKKGLTFDDVLLIPAESHVLP----NEVDLSTQLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + V N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQASEVANVKSVVVPSNATKAAVDDQNRLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 +A +L A + ++ + + A + KI L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEFREHFPKQTL 165 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G + +G+ + G+ + + G+P Sbjct: 166 I--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQIT 211 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 212 AIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|314933516|ref|ZP_07840881.1| GMP reductase [Staphylococcus caprae C87] gi|313653666|gb|EFS17423.1| GMP reductase [Staphylococcus caprae C87] Length = 325 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 88/287 (30%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D S++F + P++ M +N LA A+ Sbjct: 6 YEDIQLIPNKCIVNSRSECDTSIKFGPRTFKLPVV-------PANMQTVMNEELAQWFAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D A F + L +++ +F + + L Sbjct: 59 NDYF------YIMHRFDEEARIPF--IKKMQDDGLFASISVGVKENEF------KFIEEL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + L + E I + +D + + I + + + ++ G + + Sbjct: 105 ASKSL------VPEYITIDIAHGHSDSVINMIKHIKNHIPQSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GGLR DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGLRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELEGKKYKE 252 >gi|125624224|ref|YP_001032707.1| guanosine 5'-monophosphate oxidoreductase [Lactococcus lactis subsp. cremoris MG1363] gi|150383453|sp|A2RL29|GUAC_LACLM RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|124493032|emb|CAL97995.1| GMP reductase [Lactococcus lactis subsp. cremoris MG1363] gi|300071004|gb|ADJ60404.1| guanosine 5'-monophosphate oxidoreductase [Lactococcus lactis subsp. cremoris NZ9000] Length = 329 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 89/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCVINSRSEADTSVKLGNYTFKLPVV-------PANMQTIIDDKIAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + + +F +++ ++ S GV+ A + + Sbjct: 63 EG-----YFYIMHRFEAENRAAF-IKKMHKDGLIAS--------ISVGVKADEHAFIREI 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIEL 202 A+ L E I + AD K L + ++ VG + + Sbjct: 109 SAEALIP------EFITIDIAHGHADSVIKTIQLIKRLMPQTFVIAGNVG---TPEAVRE 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +++ ++ I Sbjct: 160 LENAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVKWCAKAASK-PVI 208 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI +GA++ + S F V + ++ Sbjct: 209 ADGGIRTHGDVAKSIRMGATMVMVGSLFAAHEESPGQTVERDGQLFKE 256 >gi|216997252|ref|YP_002333795.1| inosine-5'-monophosphate dehydrogenase [Borrelia afzelii ACA-1] gi|216753149|gb|ACJ73699.1| inosine-5'-monophosphate dehydrogenase [Borrelia afzelii ACA-1] Length = 403 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 95/321 (29%), Gaps = 77/321 (23%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM---T-----------GG 67 FDD LI R LP EV + L+ P L S+M T GG Sbjct: 12 FDDVSLIPRKSSILP----SEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGG 67 Query: 68 ---------------------NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 K + IN N +KTK+ + + K Sbjct: 68 IGIIHKNMSIEAQKKEIEKVKTYKAQKTINTNKDTNEQKTKML-----TKQYLEEPKIHK 122 Query: 107 SFELRQYAPHTVLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 + E ++ + N V + + ++ A + ++ Sbjct: 123 NTEHKEDFSNACKDLNSKLRVGAAISIDIDTIERVEELVKAHVDLIVIDSA--------- 173 Query: 166 TNFADLSSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 S++I L + P L G ++ + +G + G+ + Sbjct: 174 ---HGHSTRIIELVKTIKNKYPNLDLIAGNIVTKEAALDLINAGADCLKVGIGPGSICTT 230 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSIILGA 281 + G+P ++ C IA GG+R D++K+I GA Sbjct: 231 ------------RIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGA 278 Query: 282 SLGGLASPFLKPAMDSSDAVV 302 + + F S+ ++ Sbjct: 279 DSVMIGNLFAGAKESPSEEII 299 >gi|189425084|ref|YP_001952261.1| dihydroorotate dehydrogenase [Geobacter lovleyi SZ] gi|189421343|gb|ACD95741.1| dihydroorotate dehydrogenase family protein [Geobacter lovleyi SZ] Length = 398 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 27/224 (12%) Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT--- 166 ++ P +I ++ + D A GAD L L+ + P Sbjct: 93 IKADFPDCPIIGSIMGAANSPDEWHSLALGCQDA-GADLLELNFSCPHGY--PERGRGAA 149 Query: 167 -----NFADLSSKIALLSSAMDVPLLLKEVGCGLS----SMDIELGLKSGIRYFD-IAGR 216 ++A ++ + +P++ K + + ++ L G + I Sbjct: 150 IGQNPDYAAQITRWVTDCKEITIPVIPKLTAAVANIQNIAEELALAGAHGFCAINTIPSF 209 Query: 217 GGTSWSRIESHRDLESDIGIV-FQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDI 273 G + D+ + GI P++L C +ASGG+ NG D Sbjct: 210 FGFDLRTLRPKPDIGGKTSYGGYSGPGIK-PIALRAVSELCQSPGLPVMASGGIANGFDA 268 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMF 317 ++ ++LGA + +A+ + I+ +++E M Sbjct: 269 VEFMLLGAPVVQMATEVMLHGFG-------IIDRMQQELREFMT 305 >gi|48477542|ref|YP_023248.1| inosine 5'-monophosphate dehydrogenase [Picrophilus torridus DSM 9790] gi|48430190|gb|AAT43055.1| inosine-5'-monophosphate dehydrogenase [Picrophilus torridus DSM 9790] Length = 483 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 31/192 (16%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P N G + + G ++A+ + A F+ ++ + Sbjct: 204 RERFPDAS-RDNDGKLMVGAAVGPFDINRALALQDAGVDFIVIDTAHAHNM--------N 254 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + I + +++ ++ + G ++ D + +G+ + G+ + Sbjct: 255 VVNSIREMRKKINIDIIAGNIATGDAAND---LIDAGVDGLRVGIGPGSICTT------- 304 Query: 231 ESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P T +S N+ IA GG+R DI+K++ GAS Sbjct: 305 -----RIVAGIGVPQLTAISNVADVAEKNDIPVIADGGIRYSGDIVKALAAGASTV---- 355 Query: 289 PFLKPAMDSSDA 300 L + +D Sbjct: 356 -MLGSLLAGTDE 366 >gi|89092233|ref|ZP_01165187.1| putative Glutamate synthase GltB [Oceanospirillum sp. MED92] gi|89083321|gb|EAR62539.1| putative Glutamate synthase GltB [Oceanospirillum sp. MED92] Length = 496 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 104/349 (29%), Gaps = 89/349 (25%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGGNNKMIERINRNLAIA 82 ++ ++ P + D V +G P IS M+ G M + + LA Sbjct: 114 YYFLNCPFPTLKEDAVKTQALRIGPYCQHPYDAPSFFNISGMSYGA--MSKPAIQALAQG 171 Query: 83 AEKTK--------------------VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS- 121 A+K + +G+ + D N + E + + Sbjct: 172 AKKAGCWMNTGEGGVSPFHLEAGCDIVYQIGTAKYGLRDENGNFTDEKLKEKGDLPQVKM 231 Query: 122 ---NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA---DLSSKI 175 L G+ A + + A + ++ + PN + + A DL I Sbjct: 232 FEIKLSQGAKPGKGGILPAEKVTPEIAA---VRGIPVGEDSLSPNRHPDIASVDDLLDMI 288 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMD------IELGLKSGIRYFDI-AGRGGTSWSRIESHR 228 + P K V +D + G++S + + + GGT Sbjct: 289 ERVRRVTGKPCGFKLVMGDSEWLDDFCEAVNKRGVESAPDFITLDSADGGT--------- 339 Query: 229 DLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + + G+P SL MA + + IASG L N D+ ++ +GA Sbjct: 340 --GAAPMPLMDSVGLPLRESLPILVNKLMAHNLRDRVRVIASGKLINPTDVGAALCMGAD 397 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 F MF LG +Q L N Sbjct: 398 FAVTGRGF-------------------------MFALGC--IQALQCNK 419 >gi|319760647|ref|YP_004124585.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia vafer str. BVAF] gi|318039361|gb|ADV33911.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia vafer str. BVAF] Length = 489 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 53/209 (25%), Gaps = 72/209 (34%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D+P++ G +++ K G+ + G+ + + G Sbjct: 271 DLPIIG---GNVVTTEGALALKKVGVNAVKVGIGPGSICTT------------RIVTGVG 315 Query: 243 IPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL--------- 291 IP ++ IA GG+R DI K+I GA + L Sbjct: 316 IPQITAIYNVSRALKNTNIPVIADGGIRFSGDIAKAIAAGAHCV-MVGSLLAGTEESPGD 374 Query: 292 --------------------------------------KPAMDSSDA-------VVAAIE 306 K + + + I Sbjct: 375 IEFYQGRSFKSYRGMGSLGAMHRGSSDRYFQQDENVVGKLVPEGIEGRVIYKGKLKTIIH 434 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L M L G + + EL T +R Sbjct: 435 QLMGGLRSCMGLTGCETIDELRTKTKFVR 463 >gi|227878466|ref|ZP_03996406.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus crispatus JV-V01] gi|256849515|ref|ZP_05554947.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus crispatus MV-1A-US] gi|262046184|ref|ZP_06019147.1| guanosine monophosphate reductase [Lactobacillus crispatus MV-3A-US] gi|227861995|gb|EEJ69574.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus crispatus JV-V01] gi|256713631|gb|EEU28620.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus crispatus MV-1A-US] gi|260573514|gb|EEX30071.1| guanosine monophosphate reductase [Lactobacillus crispatus MV-3A-US] Length = 330 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 45/281 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD L+ S + D SV+F + P++ M I+ NLAI A Sbjct: 12 YDDIQLVPNKGIIKSRRDADTSVKFGNRTFKIPVV-------PANMESVIDDNLAIWLAQ 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M + +F ++ + S +G YDF + Sbjct: 65 NDYYYVM-------HRFEPEKRITF-IKMMHQKGLFASISVGIKDSEYDFIDELVK---E 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + + + + I + + L G + + Sbjct: 114 NLKPEYITIDV----------AHGHSVYVIKMIKYIKEKLPDSFLT--AGNIATPEAVRE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M ++ I Sbjct: 162 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRMCSKSASK-PLI 210 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R+ DI KSI GA++ + L +S V+ Sbjct: 211 ADGGIRHNGDIAKSIRFGATMV-MIGSMLAGHEESPGNVIK 250 >gi|170731304|ref|YP_001776737.1| glutamate synthase subunit alpha [Xylella fastidiosa M12] gi|167966097|gb|ACA13107.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa M12] Length = 1477 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 996 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1051 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 1111 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 1170 Query: 336 H 336 Sbjct: 1171 Q 1171 >gi|332992296|gb|AEF02351.1| inosine 5'-monophosphate dehydrogenase [Alteromonas sp. SN2] Length = 489 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 62/224 (27%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + S DV ++ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRSDYPDVQIIAGNVATG---DGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K++ GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVDALAGTDIPVIADGGIRFSGDIAKALAAGASCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEEAPGEVELYQGRYFKSYRGMGSLGAMNQNHGSSDRYFQESNNAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G + EL +R Sbjct: 420 EGRVAYKGPIANIIHQQMGGLRSAMGLTGCGSIDELRTKAQFVR 463 >gi|319955251|ref|YP_004166518.1| glutamate synthase (nadph) [Cellulophaga algicola DSM 14237] gi|319423911|gb|ADV51020.1| Glutamate synthase (NADPH) [Cellulophaga algicola DSM 14237] Length = 517 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 11/143 (7%) Query: 153 LNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEVGCGLSS----MDIELGLK 205 + ++++ P + F + L I ++ +P+ +K L DI Sbjct: 261 VEVGKDVLSPATHKAFKNVPELLQLIEKIAEETGLPVGIKGAIGKLDQWEQLADIMKKTG 320 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 G + + G G + + S +D + +G + + + R + FI SG Sbjct: 321 KGPDFITVDGGEGGTGAAPPSF----ADHVSLPWVYGFSSVYKVFLNRELTDRIVFIGSG 376 Query: 266 GLRNGVDILKSIILGASLGGLAS 288 L + +GA +A Sbjct: 377 KLGFPAKAAMAFAMGADCINVAR 399 >gi|229551720|ref|ZP_04440445.1| GMP reductase [Lactobacillus rhamnosus LMS2-1] gi|229314925|gb|EEN80898.1| GMP reductase [Lactobacillus rhamnosus LMS2-1] Length = 339 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 20 YEDIQMIPNKCVVRSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 72 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 73 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDEEFDFIEALAAND-L 123 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + + + + I + + ++ G + + Sbjct: 124 TPDYVTIDI----------AHGHAQIVIDMIQHIKHYLPKTFVI--AGNVGTPEAVRELE 171 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 172 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 220 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 221 GGIRNNGDIAKSIRFGATMCMIGSLF 246 >gi|221133878|ref|ZP_03560183.1| inositol-5-monophosphate dehydrogenase [Glaciecola sp. HTCC2999] Length = 489 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 66/224 (29%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++A + + DV L+ V G + +G+ + G+ + Sbjct: 256 GVIDRVAKVRADYPDVQLIAGNVATG---AGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI+K+++ GAS + Sbjct: 308 -------RIVTGCGVPQITAISDAVDALAGTDIPVIADGGIRFSGDIVKALVAGASCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEEAPGEVELYQGRYYKSYRGMGSLGAMDQSNGSSDRYFQDSKNAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G + + EL ++ Sbjct: 420 EGRVAYKGPINNIIHQQMGGLRSAMGLTGCETINELNTKPQFVK 463 >gi|71276017|ref|ZP_00652299.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Dixon] gi|71163250|gb|EAO12970.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Dixon] Length = 1477 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 996 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1051 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 1111 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 1170 Query: 336 H 336 Sbjct: 1171 Q 1171 >gi|47086253|ref|NP_998058.1| dihydropyrimidine dehydrogenase [NADP+] [Danio rerio] gi|82185925|sp|Q6NYG8|DPYD_DANRE RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase gi|42793999|gb|AAH66602.1| Dihydropyrimidine dehydrogenase [Danio rerio] Length = 1022 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 68/374 (18%), Positives = 116/374 (31%), Gaps = 97/374 (25%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 L H ++ D VD SVE G K P ++S + + I R A + Sbjct: 520 RLPLFHCSI-----DTVDISVEMCGIKFPNPFGLASAPPTTSAAM--IRR-----AFEQG 567 Query: 88 VAMAV--------------------GSQRVMFSDHNAIKSF------------------- 108 A+ G+ SF Sbjct: 568 WGFALTKTFGLDKDLVTNVSPRIVRGTTSGHIFGPGQ-GSFLNIELISEKTAAYWCKSVA 626 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ------- 161 EL+ P ++I+++ D+ + A A AD L L+L+ + + Sbjct: 627 ELKADFPKNIIIASIMCSYNQADWT-ELAKMAQES-QADALELNLSCPHGMGERGMGLAC 684 Query: 162 ---PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG-LKSGIRYFD----I 213 P N + A +P K + +DI + G + Sbjct: 685 GQDPELVRNICRW------VRKATSIPFFAKLTPNVTNIVDIATAAYEGGADGVTATNTV 738 Query: 214 AG-----RGGTSWSRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGL 267 +G T W I R + G V + P L ++ +A+GG+ Sbjct: 739 SGLMALKADATPWPGI--GRGARTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGI 796 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 797 DSAESGLQFLHAGASVLQVC-----SAVQNQDFTV--IEDYCLGLKALLYL---KSIEEL 846 Query: 328 Y----LNTALIRHQ 337 + + IRHQ Sbjct: 847 HDWDGQSPPTIRHQ 860 >gi|28199924|ref|NP_780238.1| glutamate synthase subunit alpha [Xylella fastidiosa Temecula1] gi|182682676|ref|YP_001830836.1| glutamate synthase subunit alpha [Xylella fastidiosa M23] gi|28058055|gb|AAO29887.1| glutamate synthase, alpha subunit [Xylella fastidiosa Temecula1] gi|182632786|gb|ACB93562.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa M23] Length = 1489 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 1008 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1063 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1122 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 1123 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 1182 Query: 336 H 336 Sbjct: 1183 Q 1183 >gi|307578957|gb|ADN62926.1| glutamate synthase subunit alpha [Xylella fastidiosa subsp. fastidiosa GB514] Length = 1477 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 996 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 1051 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 1111 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 1170 Query: 336 H 336 Sbjct: 1171 Q 1171 >gi|307718688|ref|YP_003874220.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM 6192] gi|306532413|gb|ADN01947.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM 6192] Length = 481 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 61/219 (27%), Gaps = 67/219 (30%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ + + DVP++ V + + +++G + G+ + Sbjct: 253 RNVIETVKAIKKEWDVPVIAGNVA---TVEGTKALIEAGADVVKVGIGPGSICTT----- 304 Query: 229 DLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ + IA GG++ DI+K+I GA + Sbjct: 305 -------RIVAGIGVPQFSAVLQCAEEAAKHGVPVIADGGIKYSGDIVKAIGAGAHAVMI 357 Query: 287 ASPF--LKPA----------------------------------MDSSD----------- 299 + F LK A + + Sbjct: 358 GNLFAGLKEAPGKEIIYEGRIFKTYRGMGSLGAIREGSGDRYQIGEGEEPVPEGVEGRVP 417 Query: 300 ---AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L M G + ++EL ++ Sbjct: 418 YKGELAPYLHQLVSGLKKGMGYCGCRTLEELRSYRRFVK 456 >gi|239611811|gb|EEQ88798.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Ajellomyces dermatitidis ER-3] Length = 434 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 77/231 (33%), Gaps = 43/231 (18%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT-----GG 67 ++ + RN+ FD L R VD S GKK P+ IS GG Sbjct: 200 ADEENALRRNRSAFDRLLLRPRVF--RDVSHVDTSTIIFGKKYRIPIGISPSAMQQLVGG 257 Query: 68 NNKMIERINRNLAIAAEKTKVAMAVGS----------QRVMFSDHNAIKSFELRQYAPHT 117 N ++ ++A AA M + S Q + N + ++ Sbjct: 258 NGEI------DMARAAASRGTTMILSSHTTCTLEDVIQAPGGGNPNRERCAQVISRFQGN 311 Query: 118 VLISNLGAVQLNYDFGVQKAHQ-------AVHVLGADG----LFLHLNPLQEIIQ-PNGN 165 + + L + HQ V L A + L QE + GN Sbjct: 312 RINERKTPLVLPPHLSLANLHQKRNNSTTKVKPLKAQPTMNRILLEARTAQEAAEITRGN 371 Query: 166 TNFAD-----LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + S ++ L S ++ ++LK + +++ D L ++ G Sbjct: 372 HDTLNDASLTWSDTMSWLRSKTNLKIILKGI---MTAEDALLAIEHGANAI 419 >gi|327182744|gb|AEA31191.1| inosine-5-monophosphate dehydrogenase [Lactobacillus amylovorus GRL 1118] Length = 380 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 87/279 (31%), Gaps = 43/279 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL IS+ G + + Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + V N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQASEVANVKSVVVPSNVTKAAVDDQNRLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 +A +L A + ++ + + A + KI L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEFREHFPKQTL 165 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G + +G+ + G+ + + G+P Sbjct: 166 I--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQIT 211 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 212 AIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|298492063|ref|YP_003722240.1| IMP dehydrogenase family protein ['Nostoc azollae' 0708] gi|298233981|gb|ADI65117.1| IMP dehydrogenase family protein ['Nostoc azollae' 0708] Length = 387 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 61/205 (29%), Gaps = 62/205 (30%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA---GRGGTS-------WSRI 224 +A +M +P++L G ++ K+G + G TS + Sbjct: 179 LAEFCRSMPIPVIL---GNCVTYEVTLDLFKAGAAAVLVGIGPGAACTSRGVLAVGVPQA 235 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D + ++D G N IA GGL G DI K I GA Sbjct: 236 TAIADCAAARDDYYRDTG--------------NYIPIIADGGLITGGDICKCIACGADGV 281 Query: 285 GLASPFLKPA-----------------------------------MDSSDAVVAAIESLR 309 + SPF + A + + +L Sbjct: 282 MIGSPFARAAEAPGRGYHWGMATPSPVLPRGTRIRVGTTGTLEQILTGPAGLDDGTHNLL 341 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 342 GALKTSMGTLGAKNIKEMQQVHVVI 366 >gi|189195964|ref|XP_001934320.1| glutamate synthase precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980199|gb|EDU46825.1| glutamate synthase precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 2133 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 61/200 (30%), Gaps = 29/200 (14%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1044 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSETGVGIVASGVAKAK 1103 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1104 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1158 Query: 267 LRNGVDILKSIILGASLGGLASPFL-------------------KPAMDSSDAVVAAIES 307 LR G D+ + +LGA G A+ L K + + V+ Sbjct: 1159 LRTGRDVAIACLLGAEEWGFATTPLIAMGNTCPVGIATQDPELRKKFAGTPEHVINFFYY 1218 Query: 308 LRKEFIVSMFLLGTKRVQEL 327 + E M LG + + ++ Sbjct: 1219 IANELRAIMAKLGFRTINDM 1238 >gi|325955909|ref|YP_004286519.1| inosine-5-monophosphate dehydrogenase [Lactobacillus acidophilus 30SC] gi|325332474|gb|ADZ06382.1| inosine-5-monophosphate dehydrogenase [Lactobacillus acidophilus 30SC] Length = 380 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 87/279 (31%), Gaps = 43/279 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL IS+ G + + Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTQLADNIKLNIPL-ISA---GMDTV 56 Query: 72 IERINRNLAIA-AEKTKVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQ 127 E +AIA A + + + + + + V N Sbjct: 57 TE---GAMAIAMALQGGLGVVHKNMSIQAQASEVANVKSVVVPSNATKAAVDDQNRLLCA 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 +A +L A + ++ + + A + KI L Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEFREHFPKQTL 165 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G + +G+ + G+ + + G+P Sbjct: 166 I--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQIT 211 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 212 AIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|322376804|ref|ZP_08051297.1| GMP reductase [Streptococcus sp. M334] gi|321282611|gb|EFX59618.1| GMP reductase [Streptococcus sp. M334] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHIFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|152978569|ref|YP_001344198.1| inositol-5-monophosphate dehydrogenase [Actinobacillus succinogenes 130Z] gi|150840292|gb|ABR74263.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus succinogenes 130Z] Length = 488 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 61/221 (27%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + D+P++ G ++ + ++G + G+ + Sbjct: 257 GVLQRVRETRAKYPDLPIIA---GNIATAEGAKALAEAGASAVKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A IA GG+R DI K+I GA+ + Sbjct: 309 -------RIVTGVGVPQITAISEAADALEGTGIPVIADGGIRFSGDIAKAIAAGATCVMV 361 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 362 GSMFAGTEEAPGEIELYQGRSYKSYRGMGSLGAMAKGSADRYFQTDNAADKLVPEGIEGR 421 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 +A ++ + + M L G + EL +R Sbjct: 422 IAYKGFLKEIILQQMGGLRSCMGLTGCATIDELRTKAEFVR 462 >gi|125976818|ref|XP_001352442.1| GA21956 [Drosophila pseudoobscura pseudoobscura] gi|54641188|gb|EAL29938.1| GA21956 [Drosophila pseudoobscura pseudoobscura] Length = 2123 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1086 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1145 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 1146 KN--------AGMPWELGIAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 1197 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1198 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 1257 Query: 317 FLLGTKRVQELYLNTALIR 335 LG + Q+L T L+R Sbjct: 1258 ANLGISKFQDLIGRTDLLR 1276 >gi|217966818|ref|YP_002352324.1| 2-nitropropane dioxygenase NPD [Dictyoglomus turgidum DSM 6724] gi|217335917|gb|ACK41710.1| 2-nitropropane dioxygenase NPD [Dictyoglomus turgidum DSM 6724] Length = 357 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 95/263 (36%), Gaps = 29/263 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA-IAAEKTKVAMAVGSQRVMFSDHNAI 105 S++ S P++ M G + LA AE+ + +G+ + + + Sbjct: 5 SLKIGDLVASVPIVQGGMAVGISLSG------LASAVAEEGGIG-VIGTAGIGMEEEDFF 57 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 ++F + +N+ A++ +K + V L + ++ ++ + Sbjct: 58 ENF----------IEANIRALRKEIRKAKEKTKGIIGVNILVALSNFADMVKTALEEKID 107 Query: 166 TNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RG 217 F+ L + + +P++ + + + F + G G Sbjct: 108 IIFSGAGLPLDLPKYLKKVHKTKLIPIVSSGRAARIIAKNWINKYNYVPDAFVVEGPLAG 167 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G + E ++ E + ++ + +E Y E IA+GG+ +G DI K + Sbjct: 168 GHLGFKREELQNPEITLENRLKEV-LDEAKIIEE--KYNKEIPVIAAGGIYDGKDIAKFL 224 Query: 278 ILGASLGGLASPFLKPAMDSSDA 300 LGA +A+ F+ +D Sbjct: 225 KLGAKGVQMATRFVATYECDADE 247 >gi|168486569|ref|ZP_02711077.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC1087-00] gi|168493170|ref|ZP_02717313.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC3059-06] gi|225860918|ref|YP_002742427.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae Taiwan19F-14] gi|298229967|ref|ZP_06963648.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254342|ref|ZP_06977928.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502754|ref|YP_003724694.1| GMP reductase [Streptococcus pneumoniae TCH8431/19A] gi|254800141|sp|C1CR55|GUAC_STRZT RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|183570431|gb|EDT90959.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC1087-00] gi|183576576|gb|EDT97104.1| guanosine monophosphate reductase [Streptococcus pneumoniae CDC3059-06] gi|225728061|gb|ACO23912.1| guanosine monophosphate reductase [Streptococcus pneumoniae Taiwan19F-14] gi|298238349|gb|ADI69480.1| GMP reductase [Streptococcus pneumoniae TCH8431/19A] gi|327389484|gb|EGE87829.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA04375] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVRQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|325911929|ref|ZP_08174332.1| GMP reductase [Lactobacillus iners UPII 143-D] gi|325476231|gb|EGC79394.1| GMP reductase [Lactobacillus iners UPII 143-D] Length = 353 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 38/271 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D S++F + P++ M IN LA+ Sbjct: 35 YDDIQLVPNKCIIKSRKEADTSIKFGKRTFKLPVV-------PANMESVINEPLAVW--- 84 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + F + L +++ + ++ A L Sbjct: 85 --LAENDYYYVMHRFQPEKRADF--IKMMHDKGLFASISVGIKDEEYKFID-QLANEKLV 139 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++++ + I + + L G + + Sbjct: 140 PEYITIDV--------AHGHSDY--VIKMIKYIKEKLPESFLT--AGNIATPEAVRELEN 187 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + +L M + IA G Sbjct: 188 AGADATKVGIGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIADG 236 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G+R+ DI KS+ GAS+ + S F Sbjct: 237 GIRHNGDIAKSVRFGASMVMIGSLFAGHLES 267 >gi|251797121|ref|YP_003011852.1| 2-nitropropane dioxygenase NPD [Paenibacillus sp. JDR-2] gi|247544747|gb|ACT01766.1| 2-nitropropane dioxygenase NPD [Paenibacillus sp. JDR-2] Length = 358 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 85/272 (31%), Gaps = 48/272 (17%) Query: 55 LSFPLLISSMTGG--NNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 + +PL ++ M GG ++ A +E + + AI+S Sbjct: 15 IRYPLFLAGMAGGPSTPELT-------AAVSEAGGLGTLGAAYMAPEDIRIAIRSIRELT 67 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 AP V NL Q ++ + L A L + P E + D Sbjct: 68 AAPFGV---NLFVNQPADH--NKRTREVQDKLNAFREQLGI-PDSE----GNEIHSPDWF 117 Query: 173 SKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIELGLKSGIRYFDI 213 + + VP++ +K V + + L + G Sbjct: 118 ERQFEVLMEEKVPVISTAFGVLPEPQMQKAKSSGIKIVAMVTTVREALLAEEKGCDAVVA 177 Query: 214 AGRGGTSWSRIESHRD-LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 G S HR D+ + + G ++L IA+GG+ +G Sbjct: 178 QG------SEAGGHRGTFGVDVHPMGANIG---TMALVPQIADRVSIPVIAAGGIMDGRG 228 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + +++LGA L + FL ++A Sbjct: 229 LAAALVLGAQGVQLGTRFLTSLEAGTNAAYRT 260 >gi|116511990|ref|YP_809206.1| guanosine 5'-monophosphate oxidoreductase [Lactococcus lactis subsp. cremoris SK11] gi|123025409|sp|Q02Z38|GUAC_LACLS RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|116107644|gb|ABJ72784.1| IMP dehydrogenase/GMP reductase [Lactococcus lactis subsp. cremoris SK11] Length = 329 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 89/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCVINSRSEADTSVKLGNYTFKLPVV-------PANMQTIIDDKIAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + + +F +++ ++ S GV+ A + + Sbjct: 63 EG-----YFYIMHRFEAENRAAF-IKKMHKDGLIAS--------ISVGVKADEHAFIREI 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIEL 202 A+ L E I + AD K L + ++ VG + + Sbjct: 109 SAEALIP------EFITIDIAHGHADSVIKTIQLIKRLMPQTFVIAGNVG---TPEAVRE 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +++ ++ I Sbjct: 160 LENAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVKWCAKAASK-PVI 208 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R DI KSI +GA++ + S F V + ++ Sbjct: 209 ADGGIRTHGDIAKSIRMGATMVMVGSLFAAHEESPGQTVERDGQLFKE 256 >gi|206602789|gb|EDZ39270.1| Glutamate synthase (NADPH) large subunit [Leptospirillum sp. Group II '5-way CG'] Length = 1525 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 95/275 (34%), Gaps = 34/275 (12%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV-- 88 + ++ P + + VD G ++P +ISSM+ G+ + R A AA++ + Sbjct: 854 FVPKSSP-VPLESVDLR---AGDH-AYPFIISSMSFGSQGEVAY--RAYAEAAQQMNIIC 906 Query: 89 AMAVGSQRVMF--SDHNAIKS------FELRQY--APHTVLISNLGAVQLNYDFGVQKAH 138 G + + F + +L +G + G Sbjct: 907 LNGEGGEIPDLIGKYPHTRGQQIASGRFGVNIALLNSSNILEIKIGQGAKPGEGGHLPGK 966 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGC 193 + + P ++I P+ N + + +A L + + +K Sbjct: 967 KVSEKV---AKARRATPGVDLISPSNNHDLYSIED-LAQLVYELKTANPRARIAVKVPVI 1022 Query: 194 GLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 K+G ++G GGT +R+ + + + + + G+ + Sbjct: 1023 PGIGTIGIGIAKAGADIITVSGFDGGTGAARMHALKYVGLPV-----EIGVSEVHRALLY 1077 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + A GGL++ VD LK + LGA+ G Sbjct: 1078 AGLRDNVEIWADGGLKSSVDALKIMCLGANRVGFG 1112 >gi|149007088|ref|ZP_01830757.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP18-BS74] gi|307127161|ref|YP_003879192.1| guanosine monophosphate reductase [Streptococcus pneumoniae 670-6B] gi|147761392|gb|EDK68358.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae SP18-BS74] gi|306484223|gb|ADM91092.1| guanosine monophosphate reductase [Streptococcus pneumoniae 670-6B] gi|332074582|gb|EGI85056.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA17545] Length = 328 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKTDAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|54294611|ref|YP_127026.1| hypothetical protein lpl1687 [Legionella pneumophila str. Lens] gi|53754443|emb|CAH15927.1| hypothetical protein lpl1687 [Legionella pneumophila str. Lens] gi|307610419|emb|CBW99989.1| hypothetical protein LPW_17461 [Legionella pneumophila 130b] Length = 490 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 59/223 (26%), Gaps = 72/223 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++ + DV ++ G ++ ++G + G+ + Sbjct: 256 GVLNRVKWIKKNYPDVQVIG---GNIATAAAARDLYEAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + GIP ++ A+ IA GG+R D+ K++ GA L Sbjct: 308 -------RIVTGVGIPQISAIANVAQELKGIIPVIADGGIRFSGDVCKALAAGADTVMLG 360 Query: 288 SPFL------------------------------------------------KPAMDSSD 299 S F K + + Sbjct: 361 SMFAGTEESPGEIELYQGRTYKNYRGMGSIGAMSLAQGSSDRYFQDASLGTEKLVPEGIE 420 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V I L M G ++EL+ T ++ Sbjct: 421 GRVPYKGPVQTIIHQLLGGLRSCMGYTGCATIEELHSKTEFVQ 463 >gi|90108521|pdb|1YPF|A Chain A, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis At 1.8 A Resolution gi|90108522|pdb|1YPF|B Chain B, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis At 1.8 A Resolution gi|110590752|pdb|2A1Y|A Chain A, Crystal Structure Of Guac-Gmp Complex From Bacillus Anthracis At 2.26 A Resolution Length = 336 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 16 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 63 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 64 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 117 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 118 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 166 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 167 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 215 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 216 DGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 262 >gi|52841951|ref|YP_095750.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54297637|ref|YP_124006.1| hypothetical protein lpp1688 [Legionella pneumophila str. Paris] gi|52629062|gb|AAU27803.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53751422|emb|CAH12840.1| hypothetical protein lpp1688 [Legionella pneumophila str. Paris] Length = 490 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 59/223 (26%), Gaps = 72/223 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++ + DV ++ G ++ ++G + G+ + Sbjct: 256 GVLNRVKWIKKNYPDVQVIG---GNIATAAAARDLYEAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + GIP ++ A+ IA GG+R D+ K++ GA L Sbjct: 308 -------RIVTGVGIPQISAIANVAQELKGIIPVIADGGIRFSGDVCKALAAGADTVMLG 360 Query: 288 SPFL------------------------------------------------KPAMDSSD 299 S F K + + Sbjct: 361 SMFAGTEESPGEIELYQGRTYKNYRGMGSIGAMSLAQGSSDRYFQDASLGTEKLVPEGIE 420 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V I L M G ++EL+ T ++ Sbjct: 421 GRVPYKGPVQTIIHQLLGGLRSCMGYTGCATIEELHSKTEFVQ 463 >gi|46201721|ref|ZP_00054452.2| COG0069: Glutamate synthase domain 2 [Magnetospirillum magnetotacticum MS-1] Length = 811 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 69/217 (31%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 256 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNPAARISVKLVSEIGVGTVAAGVSKAK 315 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S + S I + + A GG Sbjct: 316 ADHVTISGFDGGTGASPLTSIKHAGSPWEIGLAETHQT-----LVLNQLRGRIVVQADGG 370 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G D++ + +LGA G A+ L A + Sbjct: 371 LRTGRDVIIAALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPELRKRFVGQP 430 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG + + EL T L+ Sbjct: 431 EHVINYFFFVAEEVREWMAKLGVRSLSELTGRTDLLD 467 >gi|197287480|ref|YP_002153352.1| glutamate synthase subunit alpha [Proteus mirabilis HI4320] gi|194684967|emb|CAR47174.1| glutamate synthase [NADPH] large chain [Proteus mirabilis HI4320] Length = 1485 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + S + G+ Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLTSVKYAGSP-----WELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1050 EAQQALVANNLRHKVRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + V+ + +E M LG +++ +L T L+ Sbjct: 1110 NNCAMGVATQDETLRRQHFHGLPERVINYFRFIAQETRELMAQLGVRKITDLIGRTDLL 1168 >gi|148359262|ref|YP_001250469.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila str. Corby] gi|296107309|ref|YP_003619009.1| inosine 5'-monophosphate dehydrogenase [Legionella pneumophila 2300/99 Alcoy] gi|148281035|gb|ABQ55123.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila str. Corby] gi|295649210|gb|ADG25057.1| inosine 5'-monophosphate dehydrogenase [Legionella pneumophila 2300/99 Alcoy] Length = 490 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 59/223 (26%), Gaps = 72/223 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++ + DV ++ G ++ ++G + G+ + Sbjct: 256 GVLNRVKWIKKNYPDVQVIG---GNIATAAAARDLYEAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + GIP ++ A+ IA GG+R D+ K++ GA L Sbjct: 308 -------RIVTGVGIPQISAIANVAQELKGIIPVIADGGIRFSGDVCKALAAGADTVMLG 360 Query: 288 SPFL------------------------------------------------KPAMDSSD 299 S F K + + Sbjct: 361 SMFAGTEESPGEIELYQGRTYKNYRGMGSIGAMSLAQGSSDRYFQDASLGTEKLVPEGIE 420 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V I L M G ++EL+ T ++ Sbjct: 421 GRVPYKGPVQTIIHQLLGGLRSCMGYTGCATIEELHSKTEFVQ 463 >gi|52145262|ref|YP_086719.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus E33L] gi|167636253|ref|ZP_02394556.1| guanosine monophosphate reductase [Bacillus anthracis str. A0442] gi|170689204|ref|ZP_02880401.1| guanosine monophosphate reductase [Bacillus anthracis str. A0465] gi|254687103|ref|ZP_05150961.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. CNEVA-9066] gi|254724114|ref|ZP_05185899.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. A1055] gi|254742160|ref|ZP_05199847.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Kruger B] gi|300118844|ref|ZP_07056564.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus SJ1] gi|57012772|sp|Q630E8|GUAC_BACCZ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|51978731|gb|AAU20281.1| GMP reductase (guanosine monophosphate reductase) [Bacillus cereus E33L] gi|167528368|gb|EDR91139.1| guanosine monophosphate reductase [Bacillus anthracis str. A0442] gi|170666847|gb|EDT17613.1| guanosine monophosphate reductase [Bacillus anthracis str. A0465] gi|298723812|gb|EFI64534.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus SJ1] Length = 327 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 109 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 DGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|313892978|ref|ZP_07826555.1| GMP reductase [Veillonella sp. oral taxon 158 str. F0412] gi|313442331|gb|EFR60746.1| GMP reductase [Veillonella sp. oral taxon 158 str. F0412] Length = 328 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 81/270 (30%), Gaps = 48/270 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D V+ + P++ M I+ LA A Sbjct: 10 YEDVQLIPNKCIVSSRSECDTHVKLGKRTFRLPVV-------PANMQTIIDEELAEKLAR 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGV----QKAHQA 140 + + F R L S++ +F + +KA+ Sbjct: 63 EGYF------YIMHRFQPQRRMDFVKR--MHDLNLYSSISIGVKAEEFALVDEFKKANLT 114 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + D H N + E+IQ + + ++ G + + Sbjct: 115 PEYITIDIAHGHSNAVIEMIQ---------------YIKKNLPETFII--AGNVGTPEAV 157 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + ++ + Sbjct: 158 RELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-P 206 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF 290 IA GG+R+ DI KSI GA++ + S F Sbjct: 207 IIADGGIRDHGDIAKSIRFGATMVMIGSLF 236 >gi|313124210|ref|YP_004034469.1| dihydroorotate oxidase b, catalytic subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280773|gb|ADQ61492.1| Dihydroorotate oxidase B, catalytic subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 309 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 108/319 (33%), Gaps = 54/319 (16%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V + A Sbjct: 63 SLLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAEILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMVEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIES-----HRDLESDIGIVFQDWG-----IPTPLSLE 250 + RGG + + H DL++ ++ D+G P+++ Sbjct: 180 AQAAE----------RGGADGLTLINTLLGLHLDLKTRRPVLGNDFGGLSGQAVKPVAIR 229 Query: 251 MARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 M I GG+ + D + I+ GAS + S + AI+ + Sbjct: 230 MVAQVRQTTSLPIIGVGGINSPEDTAEFILAGASAVQIGSMAFHDKL--------AIKHV 281 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + +G V L Sbjct: 282 IDGLPAVLADMGASDVTSL 300 >gi|300811424|ref|ZP_07091919.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497582|gb|EFK32609.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 309 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 106/319 (33%), Gaps = 54/319 (16%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN------LAIAAEKT--------- 86 EV+ +VE G KL P++ +S T + E N + L A Sbjct: 3 AEVNLAVELPGLKLKNPVMPASGTFAFGDLPENFNWDEMGAIVLKTATRHARTGNPQPQI 62 Query: 87 -----KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 V AVG + K LR+ P +++++G + V K A Sbjct: 63 ALLADGVMNAVGLTNPGAEVVASEKIPALREKHPDLPILASVGGESVEDYVEVAKILAAA 122 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDI 200 D L L+L+ ++ KI L +D+P+ +K S ++I Sbjct: 123 K---PDALELNLSCPNVSEGGMTFGIVPEMVEKITRLVKEKVDLPVYVKLTPNVTSIVEI 179 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIES-----HRDLESDIGIVFQDWG-------IPTPLS 248 + RGG + + H DL++ ++ D+G P + Sbjct: 180 AQAAE----------RGGADGLTLINTLLGLHLDLKTRRPVLGNDFGGLSGQAVKPVAVR 229 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + I GG+ + D + I+ GAS + S + AI+ + Sbjct: 230 MVAQVKQATSLPIIGVGGINSPEDAAEFILAGASAVQIGSMAFHDKL--------AIKHV 281 Query: 309 RKEFIVSMFLLGTKRVQEL 327 + +G V L Sbjct: 282 IDGLPAVLADMGASDVTSL 300 >gi|229074394|ref|ZP_04207431.1| Glutamate synthase, large subunit [Bacillus cereus Rock4-18] gi|228708756|gb|EEL60892.1| Glutamate synthase, large subunit [Bacillus cereus Rock4-18] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPNTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|227358258|ref|ZP_03842599.1| glutamate synthase [Proteus mirabilis ATCC 29906] gi|227161594|gb|EEI46631.1| glutamate synthase [Proteus mirabilis ATCC 29906] Length = 1485 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + S + G+ Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLTSVKYAGSP-----WELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1050 EAQQALVANNLRHKVRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + V+ + +E M LG +++ +L T L+ Sbjct: 1110 NNCAMGVATQDETLRRQHFHGLPERVINYFRFIAQETRELMAQLGVRKITDLIGRTDLL 1168 >gi|30265474|ref|NP_847851.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Ames] gi|47531041|ref|YP_022390.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188293|ref|YP_031546.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Sterne] gi|65317437|ref|ZP_00390396.1| COG0516: IMP dehydrogenase/GMP reductase [Bacillus anthracis str. A2012] gi|165872529|ref|ZP_02217162.1| guanosine monophosphate reductase [Bacillus anthracis str. A0488] gi|167641416|ref|ZP_02399666.1| guanosine monophosphate reductase [Bacillus anthracis str. A0193] gi|170708656|ref|ZP_02899095.1| guanosine monophosphate reductase [Bacillus anthracis str. A0389] gi|177651831|ref|ZP_02934414.1| guanosine monophosphate reductase [Bacillus anthracis str. A0174] gi|190568926|ref|ZP_03021828.1| guanosine monophosphate reductase [Bacillus anthracis Tsiankovskii-I] gi|227818225|ref|YP_002818234.1| guanosine monophosphate reductase [Bacillus anthracis str. CDC 684] gi|229604894|ref|YP_002869665.1| GMP reductase [Bacillus anthracis str. A0248] gi|254733620|ref|ZP_05191337.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Western North America USA6153] gi|254755930|ref|ZP_05207962.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Vollum] gi|254761642|ref|ZP_05213662.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis str. Australia 94] gi|45476885|sp|Q81JJ9|GUAC_BACAN RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|30260152|gb|AAP29337.1| GMP reductase [Bacillus anthracis str. Ames] gi|47506189|gb|AAT34865.1| guanosine monophosphate reductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182220|gb|AAT57596.1| guanosine monophosphate reductase [Bacillus anthracis str. Sterne] gi|164711752|gb|EDR17296.1| guanosine monophosphate reductase [Bacillus anthracis str. A0488] gi|167510591|gb|EDR85987.1| guanosine monophosphate reductase [Bacillus anthracis str. A0193] gi|170126438|gb|EDS95326.1| guanosine monophosphate reductase [Bacillus anthracis str. A0389] gi|172082535|gb|EDT67599.1| guanosine monophosphate reductase [Bacillus anthracis str. A0174] gi|190559993|gb|EDV13976.1| guanosine monophosphate reductase [Bacillus anthracis Tsiankovskii-I] gi|227004534|gb|ACP14277.1| GMP reductase [Bacillus anthracis str. CDC 684] gi|229269302|gb|ACQ50939.1| GMP reductase [Bacillus anthracis str. A0248] Length = 327 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 109 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 DGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|36787300|emb|CAE16381.1| glutamate synthase [NADPH] large chain precursor (glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1502 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 1012 ISVKLVSEPGVGTVATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1066 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1067 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1126 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG K + +L T L+ Sbjct: 1127 NNCATGVATQDEKLRRDHYHGLPERVMNYFRFIARETREIMATLGVKNLTDLIGRTDLLE 1186 >gi|23016740|ref|ZP_00056493.1| COG0516: IMP dehydrogenase/GMP reductase [Magnetospirillum magnetotacticum MS-1] Length = 486 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 18/127 (14%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGL-SSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + IA + A ++ VG + + +K+G + GT + Sbjct: 251 HSRGVIDTIAEIRKASPH---IQLVGGNIATPEAALALIKAGADAVKVGIGPGTICTT-- 305 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 + G+P ++ ++ IA GG++ DI K+I GA Sbjct: 306 ----------RMVAGVGVPQLSAIMEVAEVAHKHGVSVIADGGIKYSGDIAKAIAAGADC 355 Query: 284 GGLASPF 290 + S F Sbjct: 356 VMIGSLF 362 >gi|83311430|ref|YP_421694.1| glutamate synthase domain-containing 2 [Magnetospirillum magneticum AMB-1] gi|82946271|dbj|BAE51135.1| Glutamate synthase domain 2 [Magnetospirillum magneticum AMB-1] Length = 1060 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 70/217 (32%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 505 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNPAARISVKLVSEIGVGTVAAGVSKAK 564 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S + S I + + + A GG Sbjct: 565 ADHVTISGFDGGTGASPLTSIKHAGSPWEIGLAETHQT-----LVLNQLRSRIVVQADGG 619 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G D++ + +LGA G A+ L A + Sbjct: 620 LRTGRDVIIAALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPELRKRFVGQP 679 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG + + EL T L+ Sbjct: 680 EHVINYFFFVAEEVREWMAKLGVRSLSELTGRTDLLD 716 >gi|114321910|ref|YP_743593.1| glutamate synthase subunit alpha [Alkalilimnicola ehrlichii MLHE-1] gi|114228304|gb|ABI58103.1| glutamate synthase (NADPH) large subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 1491 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 37/181 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 1006 VSVKLVAEAGVGTVAAGVAKAYADLITIAGYDGGTGASPLTSV-----KYAGGPWELGLS 1060 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF------------ 290 T +L ++ + GGL++G+D++K ILGA G +P Sbjct: 1061 ETHQTLRQ-NNLRDKVRLQTDGGLKSGLDVIKGAILGAESFGFGTAPMVAMGCKYLRICH 1119 Query: 291 ----------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 LK + + D V+ + +E M LG +R+++L T L+ Sbjct: 1120 LNNCATGVATQQKVLRLKHFIGTPDKVMNFFRFVARETREWMARLGVRRLEDLIGRTDLL 1179 Query: 335 R 335 Sbjct: 1180 E 1180 >gi|313887301|ref|ZP_07820992.1| dihydroorotate dehydrogenase 2 [Porphyromonas asaccharolytica PR426713P-I] gi|332299264|ref|YP_004441185.1| dihydroorotate oxidase [Porphyromonas asaccharolytica DSM 20707] gi|312923220|gb|EFR34038.1| dihydroorotate dehydrogenase 2 [Porphyromonas asaccharolytica PR426713P-I] gi|332176327|gb|AEE12017.1| dihydroorotate oxidase [Porphyromonas asaccharolytica DSM 20707] Length = 327 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 112/323 (34%), Gaps = 58/323 (17%) Query: 44 VDPSVEFLGKKLSFPLL------------ISSMT-GGNNKMI------ERIN----RNLA 80 VD + + G L P++ +++M G +I E+I + A Sbjct: 2 VDLTSHYGGIALRNPIIAGSSGLTASLQQVTAMAQAGAGAVILKSLFEEQIEATALQAQA 61 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 A + H K L + A V I + ++ Q ++ Sbjct: 62 EVATSY--PEGLDYMLHYTRQHEVEKYLTLIREAKGAVDIPVIASINCYRGGEWQSFAKS 119 Query: 141 VHVLGADGLFLHL-----NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + GAD L L++ +P Q G+ +L ++ + +P++ K Sbjct: 120 IQEAGADALELNVMRIETDPAQ-----RGSDLEKELVDLAISITRTVQIPVVFKISDRFT 174 Query: 196 SSM-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + + + +KSG++ + SW D+ D + Q I T L Sbjct: 175 NILYLAQELVKSGVKGLTCFNK---SWQT-----DINIDTLEIVQGPVISTGQELYNTLK 226 Query: 255 Y-------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 Y + ASGG+ + I+KS+++GAS + S + V + Sbjct: 227 YTGLLSGKLPQLAISASGGVMDYAGIVKSLLVGASSVQVVSTLYQHG-------VPYLTK 279 Query: 308 LRKEFIVSMFLLGTKRVQELYLN 330 + +E M G + ++E + Sbjct: 280 MLEELTQWMTQHGYRSIEEFRGS 302 >gi|258507869|ref|YP_003170620.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus rhamnosus GG] gi|257147796|emb|CAR86769.1| GMP reductase [Lactobacillus rhamnosus GG] gi|259649197|dbj|BAI41359.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus rhamnosus GG] Length = 329 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 84/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 10 YEDIQMIPNKCVVRSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 63 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDEEFDFIEALAAND-L 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + ++ Q + I + + ++ G + + Sbjct: 114 TPDY--VTIDIAHGYAQI--------VIDMIQHIKHYLPKTFVI--AGNVGTPEAVRELE 161 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 162 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 210 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 211 GGIRNNGDIAKSIRFGATMCMIGSLF 236 >gi|218245248|ref|YP_002370619.1| inosine 5-monophosphate dehydrogenase [Cyanothece sp. PCC 8801] gi|257058280|ref|YP_003136168.1| inosine 5-monophosphate dehydrogenase [Cyanothece sp. PCC 8802] gi|218165726|gb|ACK64463.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 8801] gi|256588446|gb|ACU99332.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 8802] Length = 387 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 104/362 (28%), Gaps = 102/362 (28%) Query: 45 DPSVEFLGKKLSFPLLISSMTG----------------------GNNKMIERINRNLAIA 82 D G + P+L S+M G G + N L Sbjct: 35 DTRWTIGGIEREIPILASAMDGVVDVKMAVLLSELGAIGVLNLEGIQTRYDDPNPILDRI 94 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 A + VG + +++ IK + Q + AV L G + Q V Sbjct: 95 A-SVGKSEFVGLMQELYAKP--IKPELITQRIKDIKAQGGIAAVSLTP-AGASQYGQIVA 150 Query: 143 VLGADGLFL--------HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 GAD +F+ HL+P E I P + F M +P+ L G Sbjct: 151 EAGADLVFVQATVVSTAHLSP--ESISPLDLSKF----------CQEMPMPVAL---GNC 195 Query: 195 LSSMDIELGLKSGIRYFDIA-GRG------GTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 ++ +K+G + G G G + +D D+ Sbjct: 196 VTYEVALNLMKAGAAAVLVGIGPGAACTSRGVLGVGVPQA-TAVADCAAARDDY------ 248 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD----------- 296 R IA GG+ G DI K I GA + SP + A Sbjct: 249 ----QRETGRYIPVIADGGIVTGGDICKCIACGADAVMIGSPIARSAEAPGRGYHWGMAT 304 Query: 297 -------------SSDAVVAAI-----------ESLRKEFIVSMFLLGTKRVQELYLNTA 332 + + I +L SM LG K ++E+ Sbjct: 305 PSPVLPRGTRINVGTTGTIQEILTGPAKLDDGTHNLLGALKTSMGTLGAKNMKEMQQVEV 364 Query: 333 LI 334 +I Sbjct: 365 VI 366 >gi|118401144|ref|XP_001032893.1| IMP dehydrogenase / GMP reductase domain containing protein [Tetrahymena thermophila] gi|89287238|gb|EAR85230.1| IMP dehydrogenase / GMP reductase domain containing protein [Tetrahymena thermophila SB210] Length = 606 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 89/317 (28%), Gaps = 86/317 (27%) Query: 77 RNLAIAAEKTKVAMAVGSQR----VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + L + K+ + + V D + F + L +GA D Sbjct: 300 KELMHSKRIEKIPIVTPDNKILALVTLKDLYRLDGFPIANRDSEGKLY--VGAAIGAKDD 357 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEV 191 +++A + G D L + + NG++ I L D+ ++ V Sbjct: 358 YIERAKALIEA-GVDVLVVDI--------ANGHSQI--CIDAIKKLKENFEDIDIVAGSV 406 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G EL +K+G G+ I + G+P +L Sbjct: 407 ATG---QGAELLIKAGADGIRCGIGNGSIC------------ITRIVSGCGVPQFSALSD 451 Query: 252 ARPYCNE--AQFIASGGLRNGVDILKSIILGASLG------------------------- 284 P C + I+ GG +N ++ K++ +GA Sbjct: 452 VAPICKQYQVPLISDGGNKNSGNMCKALAIGADCVMLGRLVGGCEESPSKIIYRDGKLQK 511 Query: 285 ---GLASP--FLKPAM--------------DSSDA-------VVAAIESLRKEFIVSMFL 318 G+A L A + + + + + M Sbjct: 512 VYRGMAGYGANLSKAQRIGADEPSSTNFTPEGVEGYIPYAGPLAGVLNQFVQGIKSGMSY 571 Query: 319 LGTKRVQELYLNTALIR 335 G +QEL IR Sbjct: 572 NGAHNIQELQKKVQFIR 588 >gi|57234818|ref|YP_181129.1| inositol-5-monophosphate dehydrogenase [Dehalococcoides ethenogenes 195] gi|57225266|gb|AAW40323.1| IMP dehydrogenase family protein [Dehalococcoides ethenogenes 195] Length = 381 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 110/396 (27%), Gaps = 123/396 (31%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 R FD+ ++ L ++ ++V+ + S P + S+M A Sbjct: 10 RRTYGFDEVAIVPGGLT-VNPEQVEIDFKIGNINFSIPFIASAM--------------DA 54 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA-HQ 139 + T VAM S+ S + + R P +L + + + Sbjct: 55 VTNVDTAVAM---SKMGGLSVLHLEGIYT-RYENPQEILDQIIS-------KPIDEVTAF 103 Query: 140 AVHVLGADGLFLHLNP--LQEI----------IQPNGNTNFADLSSK------------- 174 V A+ + HL + EI I P A ++ + Sbjct: 104 MQKVYTAEPIKEHLIAKRVSEIKAKGGICAVSIMPANAKKLAPVAVEAGADIISVASTVT 163 Query: 175 -------------IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + VP+L VG +S +++G+ I G + Sbjct: 164 SARHVSKSSHGLIFEEFVKMIKVPVL---VGNCVSYQACLELMRTGVHGVIIGVGPGAAC 220 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDI 273 + E G+P + I GG + G D+ Sbjct: 221 TSRE------------VLGIGVPQITASMDCAAARETYYKETGRYVPIITDGGFKKGGDV 268 Query: 274 LKSIILGASLGGLASPFLKPA-----------------------------------MDSS 298 K+I GA L SPF K A + Sbjct: 269 CKAICAGADAVMLGSPFAKAAEAPGRGYHWGMSHPHPSLPRGTRIKVGTTGSLEQILFGP 328 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +V +++ SM + G ++E+ +I Sbjct: 329 TSVTDGTQNMVGALKTSMGVCGASNIREMQQVEMVI 364 >gi|331266249|ref|YP_004325879.1| guanosine monophosphate reductase ,GMP reductase [Streptococcus oralis Uo5] gi|326682921|emb|CBZ00538.1| guanosine monophosphate reductase ,GMP reductase [Streptococcus oralis Uo5] Length = 328 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 97/347 (27%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A K Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAEQLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G YDF + A + Sbjct: 63 DG-----YFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSRLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRKVADLKHVDYVI 316 >gi|229188732|ref|ZP_04315771.1| Glutamate synthase, large subunit [Bacillus cereus ATCC 10876] gi|228594921|gb|EEK52701.1| Glutamate synthase, large subunit [Bacillus cereus ATCC 10876] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K FP +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|308048734|ref|YP_003912300.1| ferredoxin-dependent glutamate synthase [Ferrimonas balearica DSM 9799] gi|307630924|gb|ADN75226.1| ferredoxin-dependent glutamate synthase [Ferrimonas balearica DSM 9799] Length = 504 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 109/315 (34%), Gaps = 65/315 (20%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKL-SFP------LLISSMTGGNNKMIERINRNLA 80 D ++ LP + D V P G+++ P IS M+ G+ + R L+ Sbjct: 112 DIIFLNCLLPTLKEDAVPPEPIHFGQRVCRQPYTTSSFFNISGMSFGSLSVPAV--RALS 169 Query: 81 IAAEKTKVAMAVG--------------------SQRVMFSDHNAIKSFE-LRQYAPHTVL 119 + A K + M G + + D S E LR A H Sbjct: 170 LGAAKAGIWMNTGEGGLSPYHLEGGGDIVFQIGTAKYGVRDAEGRLSDERLRAVAAH--- 226 Query: 120 ISNLGAVQLNYDFGVQKAHQAV---HVLGADGLFLHLNP-LQEIIQPNGNTNFA---DLS 172 + +L G + + + A+ + P ++ I PNG+ DL Sbjct: 227 -QEVKMFELKLSQGAKPGKGGILPGEKVTAEIAAIRGIPEGKDSISPNGHPEIRSVDDLL 285 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMD--IELGLKSG----IRYFDI-AGRGGTSWSRIE 225 I + P+ K V G + +D +L + G + + + GGT + Sbjct: 286 DMIEHIRDVTGKPVGFKAVLGGTAWLDELGQLIHQRGNGSAPDFITLDSADGGTGAA--- 342 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIIL 279 +S + + G+P SL + + + IASG L N D+ ++ + Sbjct: 343 ----PQSLMDYM----GLPIRRSLPLLVAWRQRFGLEQRIRIIASGKLINPSDVAWALCV 394 Query: 280 GASLGGLASPFLKPA 294 GA + A F+ Sbjct: 395 GADVVTSARGFMFAL 409 >gi|221633416|ref|YP_002522641.1| inosine-5'-monophosphate dehydrogenase [Thermomicrobium roseum DSM 5159] gi|221156024|gb|ACM05151.1| inosine-5'-monophosphate dehydrogenase [Thermomicrobium roseum DSM 5159] Length = 511 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 74/251 (29%), Gaps = 39/251 (15%) Query: 60 LISSMTGGNNKMIERINRNLAI----AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 LI++ G I I ++ + + + D + P Sbjct: 180 LITAPVGTTLDEAREILHKYKIEKLPVVDERGILKGL----ITVKDIQKRIQYPNATKDP 235 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 H L +GA +++A V G D L + + + + + Sbjct: 236 HGRL--RVGAAVGVGPESLERAAALVEE-GVDVLVV----------DTAHGHSRAVIEMV 282 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + + DV ++ + G +++G + G+ + Sbjct: 283 KAIKARWDVDVIAGNIATG---EAARALIEAGADAVKVGVGPGSICTT------------ 327 Query: 236 IVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 V G+P ++ IA GG++ DI K+I GA + L Sbjct: 328 RVVAGVGVPQITAIMDVARVARAYGVPVIADGGIQYSGDIAKAIAAGADTV-MLGSLLAG 386 Query: 294 AMDSSDAVVAA 304 +S V+ Sbjct: 387 VDESPGEVILY 397 >gi|259484579|tpe|CBF80924.1| TPA: Glutamate synthase Fragment [Source:UniProtKB/TrEMBL;Acc:Q9Y8F4] [Aspergillus nidulans FGSC A4] Length = 2126 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 62/214 (28%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1043 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1102 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G +R Sbjct: 1103 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQIRT 1157 Query: 270 GVDILKSIILGASLGGLASPFL----------------------------KPAMDSSDAV 301 G D+ + +LGA G A+ L K + V Sbjct: 1158 GRDVAVACLLGAEEFGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFEGQPEHV 1217 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L++ Sbjct: 1218 INFFYYIANELRAIMAKLGIRTINEMVGRAELLK 1251 >gi|206968626|ref|ZP_03229582.1| putative glutamate synthase, large subunit [Bacillus cereus AH1134] gi|206737546|gb|EDZ54693.1| putative glutamate synthase, large subunit [Bacillus cereus AH1134] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K FP +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|307266315|ref|ZP_07547855.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918693|gb|EFN48927.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1] Length = 484 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 111/372 (29%), Gaps = 94/372 (25%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD LI A E+ +VD + K L+ PL+ + M T +K+ I R I Sbjct: 12 FDDVLLIP-AKSEVLPKDVDLKTKLTKKITLNIPLMSAGMDTVTESKLAIAIAREGGIGV 70 Query: 84 EKTKVAM---------AVGSQRVMFSDH-NAIKSFELRQYAP--------------HTVL 119 + + S+ + +D +R A + L Sbjct: 71 IHKNMPIERQALEVDKVKRSEHGVITDPFYLSPDHTIRDAAELMARYRISGVPITVDSKL 130 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL-------- 171 + + + ++ + K + V L+E Q L Sbjct: 131 VGIITNRDIRFEDDLDKPIREVMTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNV 190 Query: 172 ---SSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRYFDIAGRG 217 I + A++ P K+ VG G MD ++ +++G+ I Sbjct: 191 LKGLITIKDIEKAIEFPNAAKDGKGRLLVAAAVGVGKDMMDRVKALVEAGVDAIVIDTAH 250 Query: 218 GTSWSRIESH-----------------------RDLESDIGIVF---------------Q 239 G S +E+ RDL Sbjct: 251 GHSKGVLEAVSKIKEKYPDLQLIAGNVATAVATRDLIERGADCVKVGIGPGSICTTRVIA 310 Query: 240 DWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 G+P ++ ++ IA GG++ DI+K+I GAS+ L Sbjct: 311 GVGVPQITAIYDCAQEADKYGIPIIADGGIKYSGDIVKAIAAGASVV-----MLGSLFAG 365 Query: 298 SDAVVAAIESLR 309 ++ IE + Sbjct: 366 TEESPGEIEIYQ 377 >gi|161579564|ref|NP_931209.2| glutamate synthase subunit alpha [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1485 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 995 ISVKLVSEPGVGTVATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1050 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG K + +L T L+ Sbjct: 1110 NNCATGVATQDEKLRRDHYHGLPERVMNYFRFIARETREIMATLGVKNLTDLIGRTDLLE 1169 >gi|329114951|ref|ZP_08243706.1| Dihydroorotate dehydrogenase [Acetobacter pomorum DM001] gi|326695394|gb|EGE47080.1| Dihydroorotate dehydrogenase [Acetobacter pomorum DM001] Length = 357 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 +A+ IA GG+ +G DIL I LGA L + + F A + A +E L+ Sbjct: 282 LVAQAAAGRLALIACGGIESGEDILTRIRLGADLVQVYTAF---AYEGP----ALVERLK 334 Query: 310 KEFIVSMFLLGTKRVQELYLNTA 332 +E M G + + ++ Sbjct: 335 REMQHIMRAQGIETLDDIRGKDL 357 >gi|228951019|ref|ZP_04113140.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808746|gb|EEM55244.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K FP +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|289577801|ref|YP_003476428.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus Ab9] gi|289527514|gb|ADD01866.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus Ab9] Length = 484 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 130/455 (28%), Gaps = 153/455 (33%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIA-A 83 FDD LI A ++ +VD + K L+ PL M+ G + + E LAIA A Sbjct: 12 FDDVLLIP-AKSDVLPKDVDLKTKLTKKITLNIPL----MSAGMDTVTES---KLAIAIA 63 Query: 84 EKTKV------------AMAVG----SQRVMFSDH-NAIKSFELRQYAP----------- 115 + + A+ V S+ + +D + ++ A Sbjct: 64 REGGIGVIHKNMSIERQALEVDKVKRSEHGVITDPFSLTPDHTIKDAAELMARYKISGVP 123 Query: 116 ---HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL- 171 + L+ + + ++ + K + V L+E Q L Sbjct: 124 ITVDSKLVGIITNRDIRFEDDLNKPIKEVMTKDNLVTAPPGTTLEEARQILKKHKIEKLP 183 Query: 172 ----------SSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRY 210 I + A++ P K+ VG G MD ++ +++G+ Sbjct: 184 LVDENNVLKGLITIKDIEKAVEFPNAAKDSKGRLLVAAAVGVGKDMMDRVKALVEAGVDA 243 Query: 211 FDIAGRGGT-----------------------SWSRIESHRDLESDIGIVF--------- 238 I G + + E+ RDL Sbjct: 244 IVIDTAHGHSKGVLDAVSKIKEKYPDLQLIAGNVATAEATRDLIERGADCVKVGIGPGSI 303 Query: 239 ------QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P ++ ++ IA GG++ DI+K+I GAS+ L S F Sbjct: 304 CTTRVIAGVGVPQITAIYDCAQEADKYGIPIIADGGIKYSGDIVKAIAAGASVVMLGSLF 363 Query: 291 --------------------------LKPAMDSS--------------DAVV-------- 302 L + S + V Sbjct: 364 AGTEESPGEIEIYQGRSYKVYRGMGSLGAMKEGSSDRYFQEDVTKFVPEGVEGRVPYKGP 423 Query: 303 --AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + L M G + ++EL T ++ Sbjct: 424 LKDTVYQLVGGLRAGMGYCGVRNIEELRTKTKFVK 458 >gi|189467130|ref|ZP_03015915.1| hypothetical protein BACINT_03514 [Bacteroides intestinalis DSM 17393] gi|189435394|gb|EDV04379.1| hypothetical protein BACINT_03514 [Bacteroides intestinalis DSM 17393] Length = 363 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDW 241 VP++ + + + G GG + E +D + + + Sbjct: 130 VPIVSSSRAAKIICDKWQKNFDYLPDAIVVEGPKAGGHLGFKKEQIQDEKYALESL---- 185 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 IP +++ M + IA+GG+ G DI + + LGAS + S F+ Sbjct: 186 -IPEVVAIAMNYKERKDIPVIAAGGISTGEDIARFMQLGASAVQMGSIFV 234 >gi|258539115|ref|YP_003173614.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus rhamnosus Lc 705] gi|257150791|emb|CAR89763.1| GMP reductase [Lactobacillus rhamnosus Lc 705] Length = 329 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 10 YEDIQMIPNKCVVRSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 63 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDEEFDFIEALAAND-L 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + + + + I + + ++ G + + Sbjct: 114 TPDYVTIDI----------AHGHAQIVIDMIQHIKHYLPKTFVI--AGNVGTPEAVRELE 161 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 162 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 210 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 211 GGIRNNGDIAKSIRFGATMCMIGSLF 236 >gi|297544088|ref|YP_003676390.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841863|gb|ADH60379.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 484 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 130/455 (28%), Gaps = 153/455 (33%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIA-A 83 FDD LI A ++ +VD + K L+ PL M+ G + + E LAIA A Sbjct: 12 FDDVLLIP-AKSDVLPKDVDLKTKLTKKITLNIPL----MSAGMDTVTES---KLAIAIA 63 Query: 84 EKTKV------------AMAVG----SQRVMFSDH-NAIKSFELRQYAP----------- 115 + + A+ V S+ + +D + ++ A Sbjct: 64 REGGIGVIHKNMSIERQALEVDKVKRSEHGVITDPFSLTPDHTIKDAAELMARYKISGVP 123 Query: 116 ---HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL- 171 + L+ + + ++ + K + V L+E Q L Sbjct: 124 ITVDSKLVGIITNRDIRFEDDLNKPIKEVMTKDNLVTAPPGTTLEEARQILKKHKIEKLP 183 Query: 172 ----------SSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRY 210 I + A++ P K+ VG G MD ++ +++G+ Sbjct: 184 LVDENNVLKGLITIKDIEKAVEFPNAAKDSKGRLLVAAAVGVGKDMMDRVKALVEAGVDA 243 Query: 211 FDIAGRGGT-----------------------SWSRIESHRDLESDIGIVF--------- 238 I G + + E+ RDL Sbjct: 244 IVIDTAHGHSKGVLDAVSKIKEKYPELQLIAGNVATAEATRDLIERGADCVKVGIGPGSI 303 Query: 239 ------QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P ++ ++ IA GG++ DI+K+I GAS+ L S F Sbjct: 304 CTTRVIAGVGVPQITAIYDCAQEADKYGIPIIADGGIKYSGDIVKAIAAGASVVMLGSLF 363 Query: 291 --------------------------LKPAMDSS--------------DAVV-------- 302 L + S + V Sbjct: 364 AGTEESPGEIEIYQGRSYKVYRGMGSLGAMKEGSSDRYFQEDVTKFVPEGVEGRVPYKGP 423 Query: 303 --AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + L M G + ++EL T ++ Sbjct: 424 LKDTVYQLVGGLRAGMGYCGVRNIEELRTKTKFVK 458 >gi|322376317|ref|ZP_08050810.1| dihydroorotate oxidase [Streptococcus sp. M334] gi|321282124|gb|EFX59131.1| dihydroorotate oxidase [Streptococcus sp. M334] Length = 311 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDQILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKTIMAEKGYENLEDFRGKLCY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|229068214|ref|ZP_04201521.1| Glutamate synthase, large subunit [Bacillus cereus F65185] gi|228715028|gb|EEL66896.1| Glutamate synthase, large subunit [Bacillus cereus F65185] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K FP +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|199599119|ref|ZP_03212524.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus rhamnosus HN001] gi|199590012|gb|EDY98113.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus rhamnosus HN001] Length = 329 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 10 YEDIQMIPNKCVVRSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 63 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDVEFDFIEALAAND-L 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + + + + I + + ++ G + + Sbjct: 114 TPDYVTIDI----------AHGHAQIVIDMIQHIKHYLPKTFVI--AGNVGTPEAVRELE 161 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 162 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 210 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 211 GGIRNNGDIAKSIRFGATMCMIGSLF 236 >gi|12056403|emb|CAC21395.1| glutamate synthase large subunit [Thermotoga neapolitana] Length = 308 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 91/260 (35%), Gaps = 34/260 (13%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 62 NVALKTEIAPQLKLEVPVMFTAMSYGSISLNALL--SLARAARTIGTFFNTGEGGLPKEL 119 Query: 102 HNAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGL 149 + ++ + + + N G AV++ G + + + + Sbjct: 120 REFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMI 179 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + + L + + DL I + A P+ +K + +++G Sbjct: 180 PVGTDALSPATHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGMVRAG 238 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQF 261 Y I G G + + + RD GIP ++ + E A Sbjct: 239 ADYIVIDGIRGGTGAAPKVTRDH----------VGIPIEFAIAVVDQRLREEGIRHMASI 288 Query: 262 IASGGLRNGVDILKSIILGA 281 + +GG+RN D++K+I LGA Sbjct: 289 VVAGGIRNSADVIKAIALGA 308 >gi|88811517|ref|ZP_01126772.1| Glutamate synthase domain 2 [Nitrococcus mobilis Nb-231] gi|88791406|gb|EAR22518.1| Glutamate synthase domain 2 [Nitrococcus mobilis Nb-231] Length = 1462 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 977 VSVKLVAGPGVGTIAAGVAKAYADLITIAGHDGGTGASPLTSV-----KYAGTPWELGLA 1031 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF------------- 290 A + + GGL+ G+D++K+ ILGA G +P Sbjct: 1032 EAQQTLRANDLRDRVRLQTDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKYLRICHL 1091 Query: 291 ---------------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 L+ + + + + + E + LG + ++EL Sbjct: 1092 NNCPTGVATQQQVLRLQHFIGTPERIANYFTFVATEVREWLAKLGVRSLEEL 1143 >gi|296179471|gb|ADG96477.1| inosine-5-monophosphate dehydrogenase [Gordonia cholesterolivorans] Length = 503 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 31/194 (15%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + ++ + +GA ++ + A V VL D H Sbjct: 221 KDADGRLLVGAAVGAGDEAWNRALALAEVGVDVLVVDSAHGH---------------SRG 265 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + IA L + + + L G + + + +G+ + G+ + Sbjct: 266 VLEMIAKLKAEVGGRVQLIG-GNVATRSGAQALIDAGVDAVKVGVGPGSICTT------- 317 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G P ++ A C + IA GGL+ D+ K++ GAS + Sbjct: 318 -----RVVAGVGAPQITAILEAVAACKAADVPVIADGGLQYSGDVAKALAAGAS-TAMLG 371 Query: 289 PFLKPAMDSSDAVV 302 L +S ++ Sbjct: 372 SLLAGTEESPGELI 385 >gi|71019533|ref|XP_759997.1| hypothetical protein UM03850.1 [Ustilago maydis 521] gi|46099523|gb|EAK84756.1| hypothetical protein UM03850.1 [Ustilago maydis 521] Length = 2168 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 58/178 (32%), Gaps = 37/178 (20%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT + R + + G+ Sbjct: 1104 LVSEVGVGIVASGVA---KAKADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1155 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + G +R G D+ + +LGA G A+ L Sbjct: 1156 THQTLVLNDLRGRVTVQTDGQIRTGRDVAIACLLGAEEFGFATTPLIALGCIMLRKCHLN 1215 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 ++V+ L +E M LG + + E+ + L++ Sbjct: 1216 TCAAGIATQDPELREKFAGQPESVINFFYYLAEELRSYMAKLGLRTINEMVGRSDLLK 1273 >gi|301758641|ref|XP_002915175.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Ailuropoda melanoleuca] Length = 1026 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 111/359 (30%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYSK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 648 NDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGFGKR 759 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 760 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V I+ ++L K ++EL + A + HQ Sbjct: 812 VLQVC-----SAVQNQDFTV--IQDYCTGLRALLYL---KSIEELQDWDGQSPATVSHQ 860 >gi|281349697|gb|EFB25281.1| hypothetical protein PANDA_003122 [Ailuropoda melanoleuca] Length = 1009 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 111/359 (30%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 515 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 574 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 575 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYSK 634 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 635 NDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 686 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + Sbjct: 687 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGFGKR 746 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 747 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 798 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V I+ ++L K ++EL + A + HQ Sbjct: 799 VLQVC-----SAVQNQDFTV--IQDYCTGLRALLYL---KSIEELQDWDGQSPATVSHQ 847 >gi|229088607|ref|ZP_04220261.1| GMP reductase [Bacillus cereus Rock3-44] gi|228694714|gb|EEL48036.1| GMP reductase [Bacillus cereus Rock3-44] Length = 281 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 91/288 (31%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A+ Sbjct: 7 YEDIQLIPAKCVVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDEKIAV---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 +A + + SF ++ + S +G + Y F Q A + Sbjct: 56 -YLAEKGYFYIMHRFEPEKRTSF-IKDMHSRGFIASISVGVKEEEYGFIKQLAEEQLVPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + ++IQ + + + +++ + P + Sbjct: 114 YITIDIAHGHSNAVIKMIQ-----HIKEYLPESFVIAGNVGTP------------EAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 206 ADGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|220921178|ref|YP_002496479.1| glutamine amidotransferase class-II [Methylobacterium nodulans ORS 2060] gi|219945784|gb|ACL56176.1| glutamine amidotransferase class-II [Methylobacterium nodulans ORS 2060] Length = 1563 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 1013 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNPAAEVSVKLVSEVGVGTVAAGVAKAR 1072 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + + S + + G+ + A GG Sbjct: 1073 ADHITISGFDGGTGAAPLTSIKHAGGP-----WEIGLAETQQTLVLNHLRGRVALQADGG 1127 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 +R G D+L + +LGA G ++ L A + Sbjct: 1128 IRTGRDVLIAALLGADQFGFSTAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFKGTP 1187 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + +E M LG ++ +L Sbjct: 1188 EHVINYFFFVAEEVRELMAGLGVTKLDDL 1216 >gi|154248815|ref|YP_001409640.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum Rt17-B1] gi|154152751|gb|ABS59983.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum Rt17-B1] Length = 508 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 62/224 (27%), Gaps = 72/224 (32%) Query: 169 ADLSSKIALLSSAM-----DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 S K+ + D+P++ V +S +E +K+G + G+ + Sbjct: 272 HGHSKKVIETVKKIKKMYPDLPVIAGNVA---TSEAVEELIKAGADAVKVGIGPGSICTT 328 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGA 281 + G+P ++ + IA GG+R DI+K++ GA Sbjct: 329 ------------RIVAGIGVPQLSAILQCAYVAKKYDIPIIADGGIRYSGDIVKALAAGA 376 Query: 282 SLGGLASPFL-------------------------------------------KPAMDSS 298 L S F K + Sbjct: 377 ETVMLGSIFAGTEESPGETILYQGRKYKVYRGMGSIGAMKSGSADRYFQSDNQKFVPEGV 436 Query: 299 D-------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + AV + L M +G K + EL I+ Sbjct: 437 EGMVPYKGAVKDVVYQLIGGLRSGMGYVGAKNIDELQKKAKFIK 480 >gi|83312880|ref|YP_423144.1| inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82947721|dbj|BAE52585.1| Inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 486 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 18/127 (14%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGL-SSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + IA + A ++ VG + + +K+G + GT + Sbjct: 251 HSRGVIDTIAEIRKASPH---IQLVGGNIATPEAALALIKAGADAVKVGIGPGTICTT-- 305 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 + G+P ++ ++ IA GG++ DI K+I GA Sbjct: 306 ----------RMVAGVGVPQLSAIMEVAEVAHKHGVSVIADGGIKYSGDIAKAIAAGADC 355 Query: 284 GGLASPF 290 + S F Sbjct: 356 VMIGSLF 362 >gi|330685323|gb|EGG96983.1| GMP reductase [Staphylococcus epidermidis VCU121] Length = 325 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E D S++F + P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECDTSIQFGPRSFKLPVV-------PANMQTVMNEELAQWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + + A F + + H ++G + +DF Q A+ Sbjct: 58 ENDYF------YIMHRFNEAARIPFIKKMQSNHLFASISVGVKKSEFDFIEQLAN---EQ 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + + + + + I + + + ++ G + + Sbjct: 109 LTPEYITIDI----------AHGHSDSVINMIKHIKTYLPNSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNLCSKAARKPIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GGLR DI KSI GAS+ + S F + V + ++ Sbjct: 206 DGGLRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELEGKRYKE 252 >gi|301794331|emb|CBW36756.1| GMP reductase [Streptococcus pneumoniae INV104] gi|332203097|gb|EGJ17165.1| guanosine monophosphate reductase [Streptococcus pneumoniae GA47901] Length = 328 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 101/348 (29%), Gaps = 80/348 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 ++A + D F ++Q ++ S +G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPF-IKQMHDQGLIASISVGVKDYEYDFVSQLKTDAPEYI 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D H + + S I + + ++ G + + Sbjct: 117 TIDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + IA Sbjct: 160 NAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMD 296 GG+R DI KSI GAS+ G AS + K A Sbjct: 209 GGIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYK 268 Query: 297 SSDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + + ++ ++ G ++V +L +I Sbjct: 269 NVEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|229077824|ref|ZP_04210450.1| Glutamate synthase, large subunit [Bacillus cereus Rock4-2] gi|228705486|gb|EEL57846.1| Glutamate synthase, large subunit [Bacillus cereus Rock4-2] Length = 1478 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K FP +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|209524680|ref|ZP_03273227.1| IMP dehydrogenase family protein [Arthrospira maxima CS-328] gi|209494824|gb|EDZ95132.1| IMP dehydrogenase family protein [Arthrospira maxima CS-328] Length = 394 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 61/395 (15%), Positives = 104/395 (26%), Gaps = 99/395 (25%) Query: 10 INIVCKDPGIDRNKKFFDDWHLI--HRALPEISFDEVDPSVEFLGKKLSFPLLISSM--- 64 ++IV R D+ L+ HR L D S P++ S+M Sbjct: 8 VDIVIGRGKKARRAYGIDEIALVPGHRTL---DPSLADTSWTIGNINREIPIIASAMDSV 64 Query: 65 -------------TGGNNKM------IERINRNLAIAAEKTKVAMAVGSQRVMFS--DHN 103 G + E N L A K Q + Sbjct: 65 VDVNMAVKLSQIGALGVLNLEGIQTRYEDPNPILDRIASVGKTEFVTLMQELYAEPIKPE 124 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQP 162 IK + + + + +G A + + L E + P Sbjct: 125 LIKK-RIAEIKAQGGIAAVSATPAGASKYGGTVAEAGADLFFVQATVVSTAFLSPESVTP 183 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 +A + M +P++L G ++ +K+G + G + + Sbjct: 184 LD----------LAQFCANMPIPVIL---GNCVTLEVALNLMKAGAAGILVGIGPGAACT 230 Query: 223 RIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDIL 274 G+P ++ ++ IA GGL G DI Sbjct: 231 ------------SRGVLGVGVPQATAVADCAAARDDFYQETGRYVSVIADGGLITGGDIC 278 Query: 275 KSIILGASLGGLASPF-----------------------------------LKPAMDSSD 299 K I GA + SPF L+ + Sbjct: 279 KCIACGADGVMIGSPFARAEESPGRGFHWGMATPSPVLPRGTRIQVGSTGTLEQILRGPA 338 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + +L SM LG K ++E+ +I Sbjct: 339 QLDDGTHNLLGALKTSMGTLGAKTIKEMQQVEVVI 373 >gi|111610211|gb|ABH11597.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus helveticus CNRZ32] Length = 380 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 80/280 (28%), Gaps = 45/280 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL+ + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPLVSAGM------- 53 Query: 72 IERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAV 126 + + A + + + + V N Sbjct: 54 -DTVTEGAMAIAMALQGGLGVVHKXMSIQAQAGEVANVKSVVVPSNXTKAAVDDQNRLLC 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A +L A + ++ + + A + KI + Sbjct: 113 AAAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPKQT 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + +G+ + G+ + + G+P Sbjct: 165 LI--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 211 TAIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|110760297|ref|XP_393690.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1 [Apis mellifera] Length = 1024 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 78/360 (21%) Query: 36 LPEIS--FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV- 92 LP+ D+VD S+E G K P ++S + + I R A + V Sbjct: 519 LPKFHTPIDDVDLSIEICGLKFENPFGLASAPPTTSSTM--IRR-----AFEAGWGFVVT 571 Query: 93 -------------------GSQRVMFSDHNAIKSF-------------------ELRQYA 114 G+ SF EL++ Sbjct: 572 KTFSLDKDLVTNVSPRIIKGTTSRHHYGPEQ-GSFLNIELISEKSEAYWCNSIRELKKDF 630 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ---EIIQPNGNTNFADL 171 P +LI+++ D+ + Q GAD L L+L+ E L Sbjct: 631 PTKILIASIMCSYNRADWT--ELSQKAERAGADALELNLSCPHGMGESGMGLACGQDPVL 688 Query: 172 SSKIA-LLSSAMDVPLLLKEVGCGLSSMDIELGL----KSGIRYFD-IAGRGGTSWSRIE 225 I+ + A+ +P +K + I +G+ + + G Sbjct: 689 VRNISRWIREAVKIPFFVKLTPNITDIVSIAKAAYEGHANGVSAINTVQSLMGLHADATP 748 Query: 226 SHRDLESDIGIVFQDWGIPT-PLSLEMARPYC---NEAQFIASGGLRNGVDILKSIILGA 281 G T P +L + GG+ + L+ + GA Sbjct: 749 WPAVGIKKATTYGGMSGNATRPQALRAVSAISKALPGFPILGIGGIESADVALQFLHCGA 808 Query: 282 SLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 S+ + A+ + D I+ ++L K +++L + +HQ Sbjct: 809 SVLQVC-----SAVQNQD--FTLIDDYITGLKALLYL---KNLKQLKNWDGQSPPTFKHQ 858 >gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans EJ3] gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (guaB) [Thermococcus gammatolerans EJ3] Length = 485 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 65/442 (14%), Positives = 124/442 (28%), Gaps = 134/442 (30%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM----------TGGNNKMIER 74 FDD LI + E+ +VD S K +L+ P+L ++M + Sbjct: 17 FDDVLLIPQP-TEVEPKDVDVSTRITPKIRLNIPILSAAMDTVTEWEMAVAMAREGGLGV 75 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSD-----HNAIKSFEL----RQYAPHTVLI--SNL 123 I+RN++I + +V ++R + D + + + R ++ + Sbjct: 76 IHRNMSIEEQVEQVKKVKRAERFIVEDVISISPDETVDYAIFLMERNDIDGLPVVEDGKV 135 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE---IIQPNGNTNFADLSSKIALLSS 180 V D V++ ++ + + + N E + + + + L Sbjct: 136 VGVISKKDIAVKQGKLVRDIMTGEPITVPENVTAEEALTLMFEHRIDRLPVVNSEGKLVG 195 Query: 181 AMDVPLLLKEVGCGLSSMD------------------IELGLKSGIRYFDIAGRGGTSWS 222 + + L K + D + ++G I + Sbjct: 196 IITMSDLAKRRKWKNAVRDENGDLVVAAAVGPFDLERAKALDRAGADVIVIDTAHAHNLK 255 Query: 223 RIESHRDLESDIG----------------IVFQD-------------------WGIP--T 245 I++ +++ + + F D G+P T Sbjct: 256 AIKAMKEIRKAVDADIIVGNIANPKAVDDLTFADAVKVGIGPGSICTTRVVAGVGVPQIT 315 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF--------------- 290 ++L R IA GG+R DI+K+I GA L S Sbjct: 316 AIALVADRASEYGLHVIADGGIRYSGDIVKAIAAGADAVMLGSLLAGTKEAPGKEVVING 375 Query: 291 -----------LKPAMDSS--------------------DAVV-------AAIESLRKEF 312 L M + VV I L Sbjct: 376 RRYKQYRGMGSLGAMMKGGAERYYQKGHMKTRKFVPEGVEGVVPYKGSVSDVIYQLIGGL 435 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 M +G K ++EL + Sbjct: 436 RSGMGYVGAKNIEELKEKGEFV 457 >gi|189218262|ref|YP_001938904.1| IMP dehydrogenase/GMP reductase [Methylacidiphilum infernorum V4] gi|189185120|gb|ACD82305.1| IMP dehydrogenase/GMP reductase [Methylacidiphilum infernorum V4] Length = 391 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 116/373 (31%), Gaps = 81/373 (21%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFL---GK--KLSFPLLISSMTG-GNNKMIERINR- 77 FD+ L+ + I+ +EVD S E GK KL P+L S+M G + K ++R Sbjct: 16 GFDEISLVPGDVT-INPEEVDTSFEITHPSGKTIKLKIPILASAMDGVTDPKFCTEMSRL 74 Query: 78 ------NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD 131 NL + + V + + + + + AP + L +L Sbjct: 75 GGIGVINLEGIQTRYENPQEVIEEIIKCDQNKVTEFLQKIYSAPVQEKLIALRIEELKRA 134 Query: 132 FGVQKAHQAVHVLGADGLFLH-----LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 + A G L +Q + + + + + M +P+ Sbjct: 135 NALAAVSSIPQKAEAYGYIAQEAGADLYVVQSTVSTVRHISSRYKTLDLKQFCKNMHIPV 194 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESHRDLESDIGI 236 L VG ++ + ++ G+ I G G G ++ + D + Sbjct: 195 L---VGNAVTYNVVLELMECGVCGVLIGVGPGAACTSRGVLGIGVPQVTATVDAAAARDA 251 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG------------ 284 F+ G I GG+R G D+ K+I GA Sbjct: 252 YFKKTG--------------RYVPIITDGGMRRGGDLCKAIACGADAVMIGSAFARAEEA 297 Query: 285 -------GLASP----------------FLKPAMDSSDAVVAAIESLRKEFIVSMFLLGT 321 G+A+P L + V ++L SM +G Sbjct: 298 PGKGCHWGMATPHANLPRGTLIRMGISGPLSQILYGPATVDDGSQNLVGALATSMGNVGA 357 Query: 322 KRVQELYLNTALI 334 +++ +I Sbjct: 358 MNIRQFQETEIII 370 >gi|270159647|ref|ZP_06188303.1| putative ferredoxin-dependent glutamate synthase [Legionella longbeachae D-4968] gi|289165567|ref|YP_003455705.1| glutamate synthase [Legionella longbeachae NSW150] gi|269987986|gb|EEZ94241.1| putative ferredoxin-dependent glutamate synthase [Legionella longbeachae D-4968] gi|288858740|emb|CBJ12645.1| putative glutamate synthase [Legionella longbeachae NSW150] Length = 493 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 73/241 (30%), Gaps = 57/241 (23%) Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEVGCGLS 196 A+ V + P Q+ I PN ++ L + I + P K V Sbjct: 238 AIKVTQEIAKIRGIKPHQDSISPNRFPEISNSFELLNMIHHIREVTGKPTGFKVVLGNYE 297 Query: 197 SMD------IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW-GIPTPLSL 249 +D I+ G++ + + G G + + + D+ G+P SL Sbjct: 298 WLDELCQEIIKRGIEYAPDFITLDGAEGGTGATP-----------LTLADYMGLPLTESL 346 Query: 250 ------EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--------- 294 + + IASG L + ++ +GA A F+ Sbjct: 347 PVLVDKLVEYDLRERIKIIASGKLITPGVVAWALCVGADFVNSARGFMFALGCVQALKCH 406 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 ++ V +++L E V G + +EL + A Sbjct: 407 KNTCPTGITTHNKWLVRGLNPKVKANRVYHYVKNLTYEVGVICHSCGVEEPRELRRHHAR 466 Query: 334 I 334 I Sbjct: 467 I 467 >gi|206975922|ref|ZP_03236833.1| guanosine monophosphate reductase [Bacillus cereus H3081.97] gi|217962949|ref|YP_002341527.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus AH187] gi|229142205|ref|ZP_04270729.1| GMP reductase [Bacillus cereus BDRD-ST26] gi|206746016|gb|EDZ57412.1| guanosine monophosphate reductase [Bacillus cereus H3081.97] gi|217065886|gb|ACJ80136.1| guanosine monophosphate reductase [Bacillus cereus AH187] gi|228641223|gb|EEK97530.1| GMP reductase [Bacillus cereus BDRD-ST26] Length = 328 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 91/287 (31%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKADEYEFVQQLAAE----- 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 110 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 158 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 159 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 207 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 208 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 254 >gi|126738413|ref|ZP_01754118.1| glutamate synthase, large subunit [Roseobacter sp. SK209-2-6] gi|126720212|gb|EBA16918.1| glutamate synthase, large subunit [Roseobacter sp. SK209-2-6] Length = 1510 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ ++G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADVILVSGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|195440030|ref|XP_002067862.1| GK12671 [Drosophila willistoni] gi|194163947|gb|EDW78848.1| GK12671 [Drosophila willistoni] Length = 2118 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 1083 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1142 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + G+ + + + A G LR G D++ + +LGA Sbjct: 1143 KN--------AGLPWELGVAETHQVLVLNNLRSRVVVQADGQLRTGFDVVVAALLGADEF 1194 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 1195 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRKKFTGKPEHVINFFFMLAEDIRQIM 1254 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ Q+L T L+R Sbjct: 1255 ANLGIRKFQDLIGRTDLLR 1273 >gi|71899035|ref|ZP_00681200.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Ann-1] gi|71731148|gb|EAO33214.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Ann-1] Length = 720 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 239 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 293 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA G +P + Sbjct: 294 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHL 353 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 354 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 413 Query: 336 H 336 Sbjct: 414 Q 414 >gi|254510530|ref|ZP_05122597.1| glutamate synthase domain family protein [Rhodobacteraceae bacterium KLH11] gi|221534241|gb|EEE37229.1| glutamate synthase domain family protein [Rhodobacteraceae bacterium KLH11] Length = 1510 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 32/173 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++D VV I +E + LG + + E+ Sbjct: 1138 QSNTCPVGVCTQDEDLRAKFTGNADKVVNLITFYAQEVRELLASLGARSIDEI 1190 >gi|149912983|ref|ZP_01901517.1| Glutamate synthase (ferredoxin) [Roseobacter sp. AzwK-3b] gi|149813389|gb|EDM73215.1| Glutamate synthase (ferredoxin) [Roseobacter sp. AzwK-3b] Length = 1510 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 V + +K V K+ I+G G + + + + G Sbjct: 1022 QVKVCVKLVAQSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 I + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 ITEAHQVLSMNKLRDRITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDESLRAKFTGNADKVVNLITFYAQEVRELLASIGARSLDE 1189 >gi|12056415|emb|CAC21217.1| glutamate synthase large subunit [Thermotoga sp. RQ2] Length = 308 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 34/259 (13%) Query: 44 VDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 63 VKLKTEIAPQLKLEVPVMFTAMSYGSISLNAIL--SLARAARTVGTFFNTGEGGLPKELR 120 Query: 103 NAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGLF 150 + ++ + + + N G AV++ G + + + + Sbjct: 121 EFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMIP 180 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGI 208 + + L + + DL I + A P+ +K + +++G Sbjct: 181 VGTDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGAVRAGA 239 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFI 262 Y I G G + + + RD GIP ++ + E A + Sbjct: 240 DYIVIDGIRGGTGAAPKITRDH----------VGIPIEFAVAVVDQRLREEGIRHMASIV 289 Query: 263 ASGGLRNGVDILKSIILGA 281 +GG+RN D++K+I LGA Sbjct: 290 VAGGIRNSADVIKAIALGA 308 >gi|42784639|ref|NP_981886.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus ATCC 10987] gi|50400352|sp|Q72WY4|GUAC_BACC1 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|42740571|gb|AAS44494.1| guanosine monophosphate reductase [Bacillus cereus ATCC 10987] Length = 327 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 91/287 (31%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G Y+F Q A + Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKADEYEFVQQLAAE----- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 109 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|229177054|ref|ZP_04304449.1| Glutamate synthase, large subunit [Bacillus cereus 172560W] gi|228606529|gb|EEK63955.1| Glutamate synthase, large subunit [Bacillus cereus 172560W] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV +E FP +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSIGIE----THDFPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|332974935|gb|EGK11848.1| glutamate synthase (ferredoxin) [Desmospora sp. 8437] Length = 566 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 21/142 (14%) Query: 162 PNGNTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS------GIRYFD 212 PN F D+ I + + P+ +K V G +E ++ G + Sbjct: 331 PNRFRQFGDIPTMMDWIDEIRTFTGKPVGIKIVVGG--RDTVEPLVRYMAEQGKGPDFIT 388 Query: 213 I-AGRGGTSWSRIESHRDLESDI--GIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 + G GGT S E + I ++ D +L + IASG L Sbjct: 389 VDGGEGGTGASYQELADGVGLPIKSALMLTD-------ALLRKYGVRERVKLIASGKLAT 441 Query: 270 GVDILKSIILGASLGGLASPFL 291 +I ++ +GA L +A F+ Sbjct: 442 PDEIAVALGMGADLIHIARGFM 463 >gi|78213461|ref|YP_382240.1| inositol-5-monophosphate dehydrogenase [Synechococcus sp. CC9605] gi|78197920|gb|ABB35685.1| IMP dehydrogenase related 2 [Synechococcus sp. CC9605] Length = 387 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 108/393 (27%), Gaps = 97/393 (24%) Query: 11 NIVCKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG- 66 +I R D+ L+ PE++ D S G + P++ S+M G Sbjct: 2 DIQLGRSKTVRRAYGIDEIALVPGGRTVDPEVT----DTSWTLGGIEREIPIIASAMDGV 57 Query: 67 ---------------------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 G E N L A V + ++S Sbjct: 58 VDVGMAVRLSQLGALGVLNLEGVQTRYEDPNHVLDRIAA-VGKDEFVPLMQEIYSQPVQE 116 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN 165 +R+ + AV + +A+ GAD F+ Q + + Sbjct: 117 A--LIRKRIQDIGAQGGIAAVS-GTPVAAMRFGKAIAEAGADLFFV-----QATVVSTDH 168 Query: 166 TNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 T A + + L M VP+++ G ++ +++G + G + + Sbjct: 169 TGPAGQETLDLEALCRDMGVPVVI---GNCVTYDVALQLMRAGAAGVMVGIGPGAACT-- 223 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKS 276 GIP ++ + +A GG+ G I K Sbjct: 224 ----------SRGVLGVGIPQATAVADCAAARADYEKESGRYVPIVADGGIVTGGGICKC 273 Query: 277 IILGASLGGLASPFLKP-----------------------------------AMDSSDAV 301 I GA + SP + + + Sbjct: 274 IACGADAVMIGSPIARAEEAPGRGFHWGMATPSPVLPRGTRINVGNTGSIERILRGPAKL 333 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG + ++E+ ++ Sbjct: 334 DDGTHNLLGCLKTSMGTLGAQTIKEMQQVEVVV 366 >gi|47568576|ref|ZP_00239275.1| guanosine monophosphate reductase [Bacillus cereus G9241] gi|49480464|ref|YP_039446.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|222098933|ref|YP_002532991.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus Q1] gi|57012789|sp|Q6HAI0|GUAC_BACHK RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|47554818|gb|EAL13170.1| guanosine monophosphate reductase [Bacillus cereus G9241] gi|49332020|gb|AAT62666.1| GMP reductase (guanosine monophosphate reductase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|221242992|gb|ACM15702.1| GMP reductase (guanosine monophosphate reductase) [Bacillus cereus Q1] gi|324329407|gb|ADY24667.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 327 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 109 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|115385859|ref|XP_001209476.1| glutamate synthase precursor [Aspergillus terreus NIH2624] gi|114187923|gb|EAU29623.1| glutamate synthase precursor [Aspergillus terreus NIH2624] Length = 2094 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 63/214 (29%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1043 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1102 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G +R Sbjct: 1103 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQIRT 1157 Query: 270 GVDILKSIILGASLGGLASPFL----------------------------KPAMDSSDAV 301 G DI + +LGA G A+ L K + + V Sbjct: 1158 GRDIAVACLLGAEEFGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFQGTPEHV 1217 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L++ Sbjct: 1218 INFFYYVANELRAIMAKLGIRTINEMVGRAELLK 1251 >gi|90022328|ref|YP_528155.1| glutamate synthase subunit alpha [Saccharophagus degradans 2-40] gi|89951928|gb|ABD81943.1| glutamate synthase (NADPH) large subunit [Saccharophagus degradans 2-40] Length = 1481 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 37/173 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + G+ Sbjct: 995 VSVKLVSRPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRYAGSP-----WELGLS 1049 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--------- 294 T +L A + + GGL+ G+D++K+ ILGA G + + Sbjct: 1050 ETHQTLR-ANGLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICH 1108 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + + + +E M LG + ++EL Sbjct: 1109 LNNCATGVATQQDKLRRNHYIGTKEMAINFFSFVAEETREWMAKLGVRTLEEL 1161 >gi|258543051|ref|YP_003188484.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-01] gi|256634129|dbj|BAI00105.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-01] gi|256637189|dbj|BAI03158.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-03] gi|256640241|dbj|BAI06203.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-07] gi|256643298|dbj|BAI09253.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-22] gi|256646353|dbj|BAI12301.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-26] gi|256649406|dbj|BAI15347.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-32] gi|256652392|dbj|BAI18326.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655450|dbj|BAI21377.1| glutamate synthase [NADPH] large chain [Acetobacter pasteurianus IFO 3283-12] Length = 1518 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 34/180 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + + G+ Sbjct: 1035 VTVKLVARSGIGTIAAGVAKAKADAILISGHCGGTGASPLSSI-----KYAGLPWELGLA 1089 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------- 288 + M + + A GG++ G D++ + +LGA G+ + Sbjct: 1090 ETHQVLMLNRLRHRVRLRADGGIKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHS 1149 Query: 289 -----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P ++ + + + V+ + ++ + LG + + E+ T L+R Sbjct: 1150 NTCPVGVCSQDPKMRAKFEGTPEKVINLFSFIAEDVRNILASLGFRSLDEIIGRTDLLRQ 1209 >gi|117927575|ref|YP_872126.1| inosine-5'-monophosphate dehydrogenase [Acidothermus cellulolyticus 11B] gi|117648038|gb|ABK52140.1| inosine-5'-monophosphate dehydrogenase [Acidothermus cellulolyticus 11B] Length = 516 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 18/138 (13%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + +A L V ++ V ++ +++G + G+ + Sbjct: 277 HARAVLEMVARLKRDTPVDVIGGNVA---TAEGARALVEAGADGVKVGVGPGSICTT--- 330 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLG 284 V G+P +++ A C IA GGL+ DI K+I +GA Sbjct: 331 ---------RVVTGVGVPQVTAIDAAAQVCRPAGVPVIADGGLQYSGDIAKAIAVGADAV 381 Query: 285 GLASPFLKPAMDSSDAVV 302 + L +S +V Sbjct: 382 -MLGSLLAGVEESPGELV 398 >gi|157364729|ref|YP_001471496.1| dihydroorotate dehydrogenase [Thermotoga lettingae TMO] gi|157315333|gb|ABV34432.1| dihydroorotate dehydrogenase [Thermotoga lettingae TMO] Length = 386 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 99/306 (32%), Gaps = 48/306 (15%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ--------- 95 D S E++G KL P++++S +G N AE+ A V Sbjct: 2 DLSCEYVGIKLKNPIIVAS-SGLAE------NLKNMKKAEEHGAACVVAKSLFEEKICRI 54 Query: 96 -----------------RVMFSDHNAIKSFELRQYAPHTVLISN------LGAVQLNYDF 132 F F+ +Y N + ++ D Sbjct: 55 SPTPRFEIIERKMGKLRSQTFYSFEQASPFDAHEYFEEIRKAVNTLSIPVIPSINCVTDE 114 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 G + + GA L L+++ I G + S ++ ++ +PL++K Sbjct: 115 GWSQYARMAEGAGAPALELNVSCPHGSISFRGGDVEEKILSVAKIVRDSVKIPLIVKLPM 174 Query: 193 CGLSS-MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLE 250 S ++ +SGI + R +E R + + W L Sbjct: 175 QLSSPLSMAKMLERSGIDGVVMFNRLTGLDINLEKERPVLHEGYAGHGGPWAFNYVLRWI 234 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A ASGG+ +G DI+K I GA+ + S + +A I+ L + Sbjct: 235 AASSPHLNISVAASGGVGSGEDIIKYIYAGANAVEVCSLI---YLSGYEA----IDMLLE 287 Query: 311 EFIVSM 316 + M Sbjct: 288 QIKAFM 293 >gi|163938456|ref|YP_001643340.1| glutamate synthase (ferredoxin) [Bacillus weihenstephanensis KBAB4] gi|163860653|gb|ABY41712.1| Glutamate synthase (ferredoxin) [Bacillus weihenstephanensis KBAB4] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPNTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLESGMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|313682981|ref|YP_004060719.1| dihydroorotate dehydrogenase 2 [Sulfuricurvum kujiense DSM 16994] gi|313155841|gb|ADR34519.1| dihydroorotate dehydrogenase 2 [Sulfuricurvum kujiense DSM 16994] Length = 331 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 108/298 (36%), Gaps = 42/298 (14%) Query: 45 DPSVEFLGKKLSFPLLISS--MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD- 101 D + LG +L PL+ S+ M+ + + + +A + + + Sbjct: 2 DFTTSILGLELKNPLIASASPMSASLEGVKKLEDSGIAAVIMHSLFEEEINHEIHQIDHF 61 Query: 102 -HNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL--------------- 144 H S+ E Y P V NL A Q + + K + ++ ++ Sbjct: 62 LHVNSDSYAEAITYLPDEVTFDNLQADQYLEEIRLSKENVSIPIIASLNGVSAGGWVKYA 121 Query: 145 ------GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM 198 GAD L L++ + ++ G +A ++ +++PL +K + Sbjct: 122 KKLQEAGADALELNITYIPTSMELEGYRVEQMYIDTVATVAEQINIPLNVKMNSFFSNPA 181 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN- 257 ++ F AG G + + D++ ++ Q I + L +C Sbjct: 182 NMAKR-------FVEAGANGLTLFDNPTLVDVDLELLTPLQKANITSSPRLSETLRWCAI 234 Query: 258 -----EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A+ G+ +G D+LK+I+ GA LAS L + D + + +R+ Sbjct: 235 LYNKLSCSLCANTGVHSGEDVLKAIMSGADAAALASVLL---IRGEDEIKRILGDMRE 289 >gi|118480484|ref|YP_897635.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis str. Al Hakam] gi|196036116|ref|ZP_03103516.1| guanosine monophosphate reductase [Bacillus cereus W] gi|196041930|ref|ZP_03109217.1| GMP reductase [Bacillus cereus NVH0597-99] gi|196045520|ref|ZP_03112751.1| guanosine monophosphate reductase [Bacillus cereus 03BB108] gi|218906636|ref|YP_002454470.1| guanosine monophosphate reductase [Bacillus cereus AH820] gi|225867437|ref|YP_002752815.1| guanosine monophosphate reductase [Bacillus cereus 03BB102] gi|228918068|ref|ZP_04081596.1| GMP reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930462|ref|ZP_04093462.1| GMP reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936736|ref|ZP_04099527.1| GMP reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949178|ref|ZP_04111446.1| GMP reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228988683|ref|ZP_04148769.1| GMP reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229094567|ref|ZP_04225634.1| GMP reductase [Bacillus cereus Rock3-42] gi|229124959|ref|ZP_04254133.1| GMP reductase [Bacillus cereus 95/8201] gi|229159016|ref|ZP_04287072.1| GMP reductase [Bacillus cereus ATCC 4342] gi|229187685|ref|ZP_04314821.1| GMP reductase [Bacillus cereus BGSC 6E1] gi|229199585|ref|ZP_04326246.1| GMP reductase [Bacillus cereus m1293] gi|150383452|sp|A0RLN5|GUAC_BACAH RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|118419709|gb|ABK88128.1| guanosine monophosphate reductase [Bacillus thuringiensis str. Al Hakam] gi|195991283|gb|EDX55251.1| guanosine monophosphate reductase [Bacillus cereus W] gi|196023727|gb|EDX62403.1| guanosine monophosphate reductase [Bacillus cereus 03BB108] gi|196027185|gb|EDX65805.1| GMP reductase [Bacillus cereus NVH0597-99] gi|218535168|gb|ACK87566.1| guanosine monophosphate reductase [Bacillus cereus AH820] gi|225789181|gb|ACO29398.1| GMP reductase [Bacillus cereus 03BB102] gi|228583990|gb|EEK42147.1| GMP reductase [Bacillus cereus m1293] gi|228595753|gb|EEK53437.1| GMP reductase [Bacillus cereus BGSC 6E1] gi|228624435|gb|EEK81206.1| GMP reductase [Bacillus cereus ATCC 4342] gi|228658460|gb|EEL14126.1| GMP reductase [Bacillus cereus 95/8201] gi|228688814|gb|EEL42645.1| GMP reductase [Bacillus cereus Rock3-42] gi|228771134|gb|EEM19614.1| GMP reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228810461|gb|EEM56814.1| GMP reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822945|gb|EEM68786.1| GMP reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829181|gb|EEM74818.1| GMP reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841548|gb|EEM86664.1| GMP reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 328 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 110 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 158 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 159 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 207 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 208 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 254 >gi|332296117|ref|YP_004438040.1| IMP dehydrogenase family protein [Thermodesulfobium narugense DSM 14796] gi|332179220|gb|AEE14909.1| IMP dehydrogenase family protein [Thermodesulfobium narugense DSM 14796] Length = 385 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 63/303 (20%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM----------TGGNNKMIER 74 D+ L I ++VD SV+ + S P++ S+M + Sbjct: 15 GLDEIALRPTERT-IDPEDVDISVKIGCYEFSIPVIASAMDSVVNPFIAVELSKYGALGV 73 Query: 75 INRN------------LAIAAEKTKVAMAVGSQRVMFS--DHNAIKSFELRQYAPHTVLI 120 IN L A + QR+ I +++ H + Sbjct: 74 INLQGIQTRYDDPVPVLEEIAAASTDDFVTVMQRLYEEPIKPELI-IKRIQEVKSHGAIA 132 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + Q+ +FG GAD LQ + + + I S Sbjct: 133 AVSSVPQMAAEFGP-----IARDAGADIF-----VLQATVIAPKHISSKGNILNIKEFCS 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESHRDL 230 M++P++ VG + ++ G I G G G + + + Sbjct: 183 MMEIPVI---VGNTVGFSSTIGLMRQGASAVLIGVGPGAACTTRGVLGIGVPQATAISEA 239 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + F + G IA GG+ N D++K++ +GA + SP Sbjct: 240 AAARDMFFNETG--------------KYIPIIADGGMVNSGDMIKALAVGADAVMIGSPI 285 Query: 291 LKP 293 + Sbjct: 286 ARA 288 >gi|326925020|ref|XP_003208720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Meleagris gallopavo] Length = 1214 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 115/361 (31%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D VD SV G K P I+S T ++ MI R A + AV + Sbjct: 754 VDLVDISVLMAGLKFPNPFGIASATPATSSSMIRR--------AFEAGWGFAVTKTFSLD 805 Query: 100 SD-------------------HNAIKSF-------------------ELRQYAPHTVLIS 121 D SF EL+ P +LI+ Sbjct: 806 KDIVTNVSPRIVRGITSGPIYGPGQGSFLNIELISEKTAAYWCKSITELKSDFPKQILIA 865 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADL 171 ++ D+ + + GAD L L+L+ + + P N Sbjct: 866 SIMCSYSKDDWT--ELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW 923 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSW 221 + A+ +P K ++I + + G ++G GT W Sbjct: 924 ------VRQAVQIPFFAKLTPNVTDIVNIAMAAQEGGADGVTATNTVSGLMGLKADGTPW 977 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + L + G V + P L ++ +A+GG+ + L+ + G Sbjct: 978 PAVGA--GLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESALQFLHSG 1035 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL----YLNTALIRH 336 AS+ + A+ + D V I+ ++L ++EL + A +RH Sbjct: 1036 ASVLQVC-----SAIQNQDFTV--IDDYCSGLRALLYL---NSIEELGDWNGQSPATMRH 1085 Query: 337 Q 337 Q Sbjct: 1086 Q 1086 >gi|73748228|ref|YP_307467.1| inosine 5-monophosphate dehydrogenase [Dehalococcoides sp. CBDB1] gi|147669010|ref|YP_001213828.1| inositol-5-monophosphate dehydrogenase [Dehalococcoides sp. BAV1] gi|289432277|ref|YP_003462150.1| IMP dehydrogenase family protein [Dehalococcoides sp. GT] gi|73659944|emb|CAI82551.1| IMP dehydrogenase family protein [Dehalococcoides sp. CBDB1] gi|146269958|gb|ABQ16950.1| IMP dehydrogenase family protein [Dehalococcoides sp. BAV1] gi|288945997|gb|ADC73694.1| IMP dehydrogenase family protein [Dehalococcoides sp. GT] Length = 381 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 111/382 (29%), Gaps = 95/382 (24%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLA 80 R FD+ ++ L ++ ++V+ + S P + S+M + ++ +A Sbjct: 10 RRTYGFDEVAIVPGGLT-VNPEQVEVDFKIGDINFSIPFIASAM-----DAVTNVDTAVA 63 Query: 81 IAAEKTKVAMAVGSQRVMFSDH------------NAIKSFELRQYAPHTVL--------- 119 ++ + + + + + + SF + Y + Sbjct: 64 MSKMGGLSVLHLEGIYTRYENPQEILDQIISKPIDEVTSFMQKVYTAEPIKEHLISKRVS 123 Query: 120 ----ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 + AV L + A AV GAD + + + + + Sbjct: 124 EIKAKGGICAVSLMPANAKKLAPIAVEA-GADIISV----ASTVTSARHVSKSSHGL-VF 177 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIG 235 + VP+L VG +S +++G+ I G + + E Sbjct: 178 EEFVKMIKVPVL---VGNCVSYQACLELMRTGVHGVIIGVGPGAACTSRE---------- 224 Query: 236 IVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLA 287 G+P + I GG + G D+ K+I GA L Sbjct: 225 --VLGIGVPQITASMDCAAARETYYKETGRYVPIITDGGFKKGGDVCKAICAGADAVMLG 282 Query: 288 SPF-----------------------------------LKPAMDSSDAVVAAIESLRKEF 312 SPF L+ + +V ++L Sbjct: 283 SPFAKATEAPGRGYHWGMSHPHPSLPRGTRIKVGTTGSLEQILFGPTSVTDGTQNLVGAL 342 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM + G ++E+ +I Sbjct: 343 KTSMGVCGASNIREMQQVEMVI 364 >gi|260102217|ref|ZP_05752454.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus helveticus DSM 20075] gi|260083958|gb|EEW68078.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus helveticus DSM 20075] Length = 380 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 81/280 (28%), Gaps = 45/280 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL+ + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPLVSAGM------- 53 Query: 72 IERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAV 126 + + A + + + + + V N Sbjct: 54 -DTVTEGAMAIAMALQGGLGVVHKNMSIQAQAGEVANVKSVVVPSNTTKAAVDDQNRLLC 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A +L A + ++ + + A + KI + Sbjct: 113 AAAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPKQT 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + +G+ + G+ + + G+P Sbjct: 165 LI--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 211 TAIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|54307975|ref|YP_128995.1| inosine 5'-monophosphate dehydrogenase [Photobacterium profundum SS9] gi|46912401|emb|CAG19193.1| putative inosine-5-monophosphate dehydrogenase [Photobacterium profundum SS9] Length = 487 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I +A + ++ V ++ + +G+ + G+ + Sbjct: 256 GVLQRIRETRAAFPELQIIGGNVA---TAAGARALIDAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R D+ K+I GAS + Sbjct: 308 -------RIVTGVGVPQLTAISDAVDAASEFGIPVIADGGIRYSGDMCKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVELYQGRAYKSYRGMGSLGAMSQGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA I+ + + SM L G+ + +L T +R Sbjct: 421 VAYKGHIKEIIHQQMGGLRSSMGLTGSATIDDLRTKTEFVR 461 >gi|15896710|ref|NP_350059.1| guanosine 5'-monophosphate oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|45476966|sp|Q97DK4|GUAC_CLOAB RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|15026562|gb|AAK81399.1|AE007844_9 GMP reductase [Clostridium acetobutylicum ATCC 824] gi|325510876|gb|ADZ22512.1| guanosine 5'-monophosphate oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 327 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 87/290 (30%), Gaps = 48/290 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ N+A Sbjct: 7 YEDIQLIPAKCIVRSRSECDTSVILGEHSFRLPVV-------PANMQTIIDENIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + + SF + L +++ ++ A L Sbjct: 55 LFLAQNGYFYIMHRFEPEKRLSF--IKNMKSKGLFASISVGVKREEYDF-IKQLAQENLS 111 Query: 146 ADGLFL-----HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + + + H N + E+IQ + K +++ + P + Sbjct: 112 PEYITIDIAHGHSNTVIEMIQ-----HIKKYLPKSFVIAGNVGTP------------EAV 154 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + +L ++ Sbjct: 155 RELEHAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCSKAASK-P 203 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 IA GG+R DI KSI GA++ + S F + + + ++ Sbjct: 204 IIADGGIRTPGDIAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|307720713|ref|YP_003891853.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica DSM 16294] gi|306978806|gb|ADN08841.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica DSM 16294] Length = 481 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 71/194 (36%), Gaps = 27/194 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R P++ + G + + GV + +A ++ A L L+ + + Sbjct: 202 RIEYPNSNKDA-FGRLVVGAAIGVGQMDRAKALVDAGADVLVLDSA--------HGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + +++V ++ G ++ E +++G + G+ + Sbjct: 253 ILDTVKAIKDSLEVDIIA---GNIATAEATEALIEAGADAVKVGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P +++ + IA GG++ DI K++ +GA+ +A Sbjct: 303 -----RIVAGVGVPQISAIDECAAAARKHGVPVIADGGIKYSGDISKALAVGAACV-MAG 356 Query: 289 PFLKPAMDSSDAVV 302 L +S + Sbjct: 357 SLLAGTEESPGETI 370 >gi|228995841|ref|ZP_04155500.1| Glutamate synthase, large subunit [Bacillus mycoides Rock3-17] gi|229003460|ref|ZP_04161279.1| Glutamate synthase, large subunit [Bacillus mycoides Rock1-4] gi|228757783|gb|EEM07009.1| Glutamate synthase, large subunit [Bacillus mycoides Rock1-4] gi|228763921|gb|EEM12809.1| Glutamate synthase, large subunit [Bacillus mycoides Rock3-17] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 29/253 (11%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDH 102 K P +ISSM+ G+ I R A AA++ + +G Sbjct: 836 KNHDLPFIISSMSFGSQNEIAF--RAYAEAADRLNMISLNGEGGEIKDMIGKYPHTRGQQ 893 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEII 160 A F + + SNL +++ + + N ++I Sbjct: 894 IASGRFGV---NAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTSKIAEARNATIGSDLI 950 Query: 161 QPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P+ N + + +A + + + + +K K+G + +I+G Sbjct: 951 SPSNNHDIYSIED-LAQIITEIKTANQLARVAVKVPVVPNIGTIAVGIAKAGADFINISG 1009 Query: 216 R-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GGT +RI + + + + + G+ + + + + A GG+R+ D L Sbjct: 1010 FDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWADGGIRSVNDAL 1064 Query: 275 KSIILGASLGGLA 287 K ++LGA+ G Sbjct: 1065 KIMLLGANRIGFG 1077 >gi|296272965|ref|YP_003655596.1| inosine-5'-monophosphate dehydrogenase [Arcobacter nitrofigilis DSM 7299] gi|296097139|gb|ADG93089.1| inosine-5'-monophosphate dehydrogenase [Arcobacter nitrofigilis DSM 7299] Length = 481 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 ++ P+ G +++ GV + +A ++ A L L+ + + Sbjct: 202 KREYPNANK-DEFGRLRVGAAIGVNQLDRARALVKAGVDVLVLDSA--------HGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + + MDV ++ V ++ + G + G+ + Sbjct: 253 ILDTVKAIKAEMDVQIIAGNVA---TAEATADLIACGADGVKVGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEM--ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P +++ A IA GG+R D+ K++ +GAS + S Sbjct: 303 -----RIVAGVGVPQISAIDECAAEGAKTGTPIIADGGIRYSGDVAKALAVGASSVMMGS 357 Query: 289 PFLKPAMDSSDAVVAAIESLR 309 + V++ + Sbjct: 358 ALAGTEESPGEVVLSQGRKFK 378 >gi|154149366|ref|YP_001406470.1| inositol-5-monophosphate dehydrogenase [Campylobacter hominis ATCC BAA-381] gi|153805375|gb|ABS52382.1| inosine-5'-monophosphate dehydrogenase [Campylobacter hominis ATCC BAA-381] Length = 485 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 75/220 (34%), Gaps = 35/220 (15%) Query: 102 HNAIKSFELRQYAPHTVLISN--------LGAVQLNYDFGVQKAHQAVHVLGADGLFL-H 152 +A + F + ++ SN + ++ ++ + + A + + H Sbjct: 167 DDAKEIFMNNKVEKLPIVDSNGHLEGLITIKDLKKRIEYPNSNKDKYGRLRVAAAISVGH 226 Query: 153 LNPLQEI--------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 L+ + + + + + + + + L D+ +++ V + I+ Sbjct: 227 LDRAEALIKAGVDALVMDSAHGHSKGIIDTLKELKRNFDIDIVVGNVA---NPASIKDIA 283 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFI 262 ++G + G+ + + G+P T +S + I Sbjct: 284 EAGADAVKVGIGPGSICTT------------RIVAGVGVPQITAISDCANEAKKYDIPVI 331 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG++ DI K++ GAS + L +S +V Sbjct: 332 ADGGIKYSGDIAKALAAGASSV-MLGSLLAGCEESPGELV 370 >gi|111221330|ref|YP_712124.1| glutamate synthase large subunit-like protein [Frankia alni ACN14a] gi|111148862|emb|CAJ60540.1| Glutamate synthase large subunit-like protein [Frankia alni ACN14a] Length = 481 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 30/146 (20%) Query: 164 GNTNFADLSS---KIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI----A 214 + ++ KI + + VP+ +K +G D+ L + +G + Sbjct: 216 RHPDWTGPDDLKIKIEEIREVTDWQVPVYVK-IGATRVDHDVRLAVAAGADVVVVDGMQG 274 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC------NEAQFIASGGLR 268 G G T + IE GIPT ++ +A E I SGG+R Sbjct: 275 GTGATQDAFIEHT--------------GIPTLAAVRLAAAALADLRLTGEVGLIISGGIR 320 Query: 269 NGVDILKSIILGASLGGLASPFLKPA 294 G D+ K++ LGA L L Sbjct: 321 TGADVAKALALGADAVSLGVAPLVAL 346 >gi|309803607|ref|ZP_07697699.1| GMP reductase [Lactobacillus iners LactinV 11V1-d] gi|309808948|ref|ZP_07702824.1| GMP reductase [Lactobacillus iners LactinV 01V1-a] gi|308164355|gb|EFO66610.1| GMP reductase [Lactobacillus iners LactinV 11V1-d] gi|308167795|gb|EFO69937.1| GMP reductase [Lactobacillus iners LactinV 01V1-a] Length = 330 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 38/271 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D S++F + P++ M IN LA+ Sbjct: 12 YDDIQLVPNKCIIKSRKEADTSIKFGKRTFKLPVV-------PANMESVINEPLAVW--- 61 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + F + L +++ + ++ A L Sbjct: 62 --LAENDYYYVMHRFQPEKRADF--IKMMHDKGLFASISVGIKDEEYKFID-QLANEKLV 116 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++++ + I + + L G + + Sbjct: 117 PEYITIDV--------AHGHSDY--VIKMIKYIKEKLPESFLT--AGNIATPEAVRELEN 164 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + +L M + IA G Sbjct: 165 AGADATKVGIGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIADG 213 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G+R+ DI KS+ GAS+ + S F Sbjct: 214 GIRHNGDIAKSVRFGASMVMIGSLFAGHLES 244 >gi|228989652|ref|ZP_04149636.1| Glutamate synthase, large subunit [Bacillus pseudomycoides DSM 12442] gi|228770189|gb|EEM18769.1| Glutamate synthase, large subunit [Bacillus pseudomycoides DSM 12442] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 29/253 (11%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDH 102 K P +ISSM+ G+ I R A AA++ + +G Sbjct: 836 KNHDLPFIISSMSFGSQNEIAF--RAYAEAADRLNMISLNGEGGEIKDMIGKYPHTRGQQ 893 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP--LQEII 160 A F + + SNL +++ + + N ++I Sbjct: 894 IASGRFGV---NAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTSKIAEARNATIGSDLI 950 Query: 161 QPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 P+ N + + +A + + + + +K K+G + +I+G Sbjct: 951 SPSNNHDIYSIED-LAQIITEIKTANQLARVAVKVPVVPNIGTIAVGIAKAGADFINISG 1009 Query: 216 R-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GGT +RI + + + + + G+ + + + + A GG+R+ D L Sbjct: 1010 FDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWADGGIRSVNDAL 1064 Query: 275 KSIILGASLGGLA 287 K ++LGA+ G Sbjct: 1065 KIMLLGANRIGFG 1077 >gi|229101275|ref|ZP_04232031.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-28] gi|228682143|gb|EEL36264.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-28] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPNTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|332528906|ref|ZP_08404876.1| inosine-5'-monophosphate dehydrogenase [Hylemonella gracilis ATCC 19624] gi|332041663|gb|EGI78019.1| inosine-5'-monophosphate dehydrogenase [Hylemonella gracilis ATCC 19624] Length = 489 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 115/356 (32%), Gaps = 94/356 (26%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMI---------ER 74 FDD L+ A ++ + S F L+ PL+ ++M T ++ Sbjct: 10 FDDVLLVP-AYSQVLPKDTSLSTRFSRNIALNLPLVSAAMDTVTEARLAIAIAQEGGMGI 68 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNLGAV------- 126 I++NL A + +VA + + D I + +RQ + + G Sbjct: 69 IHKNLTAAEQAAQVAKVKRYESGVLRDPVVINPNATVRQVMQLSDQLGVSGFPVVDNGKV 128 Query: 127 -----------QLNYDFGVQKA----HQAVHVLG------ADGLFLHLNPLQEIIQPNGN 165 + YD V++ + V + A L L+ + L+ ++ N Sbjct: 129 VGIVTGRDLRFETRYDLPVREIMTPRERLVTMPDGTTPGEAKAL-LNKHKLERLLLVNDA 187 Query: 166 TNFADLSSKIALLSSAMDVPLLLKEVGCGL-----------SSMDIELGLKSGIRYFDIA 214 L + + ++ ++ P ++ L + +E +K+G+ + Sbjct: 188 FELKGLIT-VKDITKQLNFPNAARDAAGRLRVGAAVGVGEGTEERVEALVKAGVDAIVVD 246 Query: 215 GRGGTSWSRIESHRDLESDIGI-------------------------------------- 236 G S I+ R ++ + Sbjct: 247 TAHGHSKGVIDRVRWVKKNYPQVDVVGGNIATGAAARALVDVGADAVKVGIGPGSICTTR 306 Query: 237 VFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+P ++++ IA GG+R DI K+I GAS + S F Sbjct: 307 IVAGVGVPQVMAIDGVATALQGTGVPLIADGGIRYSGDIAKAIAAGASTVMMGSMF 362 >gi|330932979|ref|XP_003303995.1| hypothetical protein PTT_16404 [Pyrenophora teres f. teres 0-1] gi|311319674|gb|EFQ87907.1| hypothetical protein PTT_16404 [Pyrenophora teres f. teres 0-1] Length = 347 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 37/240 (15%) Query: 57 FPLLISS-MTGGNNKMIERINRNLAIAAE-KTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 PL+I++ M G NLA A + M + + + + + Sbjct: 13 TPLIINAPMAGFAG-------GNLASAVTLSGGLGMIGSAFSMTEVRKELSLAASVFKNN 65 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ---PNGNTNFADL 171 P + G+ +++ A + P ++ P ++ + Sbjct: 66 P-------IATSSNTLPIGLGFLPFVLNMSDALAVIEEFKPA--VVWLFVPKSLDDYTEW 116 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 I +SS + + L V + I ++ D G G + + S L Sbjct: 117 VPAIREVSSESKIWIQLGSVAAAVHVARIARPDVLCLQGADAGGHG---FEKGASIISLL 173 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G +ASGG+ +G + ++ LGA + + FL Sbjct: 174 PEASDALAAEGFS-------------HIPLVASGGVVDGRGVAAALTLGAQGVVMGTRFL 220 >gi|331217481|ref|XP_003321419.1| glutamate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309300409|gb|EFP77000.1| glutamate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1214 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 35/197 (17%) Query: 169 ADLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIES 226 DL I L + V + +K V + K+ + I+G GGT + Sbjct: 600 KDLKQLIYDLKCANPRVQVSVKLVSEVGVGIVASGVAKAKADHILISGHDGGTG-----A 654 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 R + + G+ + G +R G D+ + +LGA G Sbjct: 655 SRWSGIKYAGLPWELGLAKTHQTLVLNNLRGRVCLQTDGQIRTGRDVAIAALLGAEEFGF 714 Query: 287 AS---------------------------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFL 318 A+ P L+ + V+ + +E M Sbjct: 715 ATTPLIAMGCIMMRRCHQNTCPVGVATQDPVLRAKFTGQPEHVINFFYYVAEELRTHMAK 774 Query: 319 LGTKRVQELYLNTALIR 335 LG + + E+ T L++ Sbjct: 775 LGFRTLNEMVGRTDLLK 791 >gi|315185782|gb|EFU19548.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM 6578] Length = 481 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/219 (11%), Positives = 61/219 (27%), Gaps = 67/219 (30%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ + + D+P++ V + + +++G + G+ + Sbjct: 253 RNVVETVKAIKKEWDIPVIAGNVA---TVEGTKALIEAGADMVKVGIGPGSICTT----- 304 Query: 229 DLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ + IA GG++ DI+K+I GA + Sbjct: 305 -------RIVAGIGVPQFSAVLQCAEEAAKHGVPVIADGGIKYSGDIVKAIGAGAHAVMI 357 Query: 287 ASPF--LKPA----------------------------------MDSSD----------- 299 + F LK A + + Sbjct: 358 GNLFAGLKEAPGKEIIYEGRIFKSYRGMGSLGAIREGSGDRYQIGEGEEPVPEGVEGRVP 417 Query: 300 ---AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L M G + +++L ++ Sbjct: 418 YKGELAPYLHQLVSGLKKGMGYCGCRTLEDLRSYRRFVK 456 >gi|306829714|ref|ZP_07462903.1| dihydroorotate dehydrogenase A [Streptococcus mitis ATCC 6249] gi|304428065|gb|EFM31156.1| dihydroorotate dehydrogenase A [Streptococcus mitis ATCC 6249] Length = 311 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ NG D Sbjct: 198 -NGLYIEEESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLNGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMTEKGYENLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|74318485|ref|YP_316225.1| dihydroorotate dehydrogenase 2 [Thiobacillus denitrificans ATCC 25259] gi|74057980|gb|AAZ98420.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 336 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 107/302 (35%), Gaps = 45/302 (14%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLAIAAEKTKVAMAVGSQRVMFSD- 101 +D S ++LG KL PL+ S+ + N L A V ++ + + D Sbjct: 2 IDLSTDYLGLKLKNPLVPSA----SPLSRNLDNALRLEDAGAAALVMYSLFEEELRAEDA 57 Query: 102 --------HNAIKS----------FEL---RQYAPHTVLISNLGAVQLNYDFGVQ----- 135 + S FE R + L + LG + GV Sbjct: 58 MLDRFLTCPDFGHSEAANFLPSAPFEDGLERYVSQLQKLKARLGIPVIASLNGVSRSGWV 117 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + +A+ GAD L L++ + + NG A S + L A+ +P+++K Sbjct: 118 ELGRALEEAGADALELNVYHVAAEMWENGEAVEARYLSLLRDLRHAVKLPIVMKLSPFFS 177 Query: 196 S-SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 S ++ +G + + R + + + D + + + +L R Sbjct: 178 SLPNFVKRLEHAGAQGVVLFNR----FYQPDIDLDTLCVVDRLHLSY---PDEALLRIRW 230 Query: 255 YC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 A+GG+ + + LK +++GA + LAS L+ ++ IE Sbjct: 231 LSILHGRTGLTLAATGGVHSHDEALKMLLVGADVIHLASCLLQHGPARLTRILQDIERWM 290 Query: 310 KE 311 E Sbjct: 291 GE 292 >gi|332188289|ref|ZP_08390016.1| glutamine amidotransferases class-II family protein [Sphingomonas sp. S17] gi|332011685|gb|EGI53763.1| glutamine amidotransferases class-II family protein [Sphingomonas sp. S17] Length = 1506 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 38/218 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL--SSAMD--VPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + +K V K+ Sbjct: 983 HATPGVTLISPPPHHDIYSIEDLAQLIYDCKQINPRARVCVKLVSSAGIGTVAAGVAKAH 1042 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 ++G GGT S + G+ + A GG Sbjct: 1043 ADVILVSGHVGGTGASP-----QTSIKYAGTPWEMGLSEVNQTLTLNGLRGRIRLRADGG 1097 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 L+ G DI+ + ILGA G+ + L + Sbjct: 1098 LKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQCHSNTCPVGVCVQDERLRAKFTGTP 1157 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ + + +E + LG + + E+ T L+R Sbjct: 1158 EKVINLMTFIAEEVRDILARLGVRSLDEVIGRTELLRQ 1195 >gi|229114124|ref|ZP_04243549.1| Glutamate synthase, large subunit [Bacillus cereus Rock1-3] gi|228669394|gb|EEL24811.1| Glutamate synthase, large subunit [Bacillus cereus Rock1-3] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPNTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|159042558|ref|YP_001531352.1| glutamate synthase [Dinoroseobacter shibae DFL 12] gi|157910318|gb|ABV91751.1| glutamate synthase [Dinoroseobacter shibae DFL 12] Length = 1512 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1024 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1079 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1080 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAALMGAEEYGIGTAALIAMGCIMVRQC 1139 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++D VV I +E + +G + + E+ L+ Sbjct: 1140 QSNTCPVGVCTQDEELRAKFTGNADKVVNLITFYAQEVREVLAAIGARSLDEVIGRADLL 1199 Query: 335 RH 336 R Sbjct: 1200 RQ 1201 >gi|227893932|ref|ZP_04011737.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus ultunensis DSM 16047] gi|227864236|gb|EEJ71657.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus ultunensis DSM 16047] Length = 330 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD LI S + D SV+F + P++ M IN +LAI + Sbjct: 12 YDDIQLIPNKGIIKSRRDADTSVKFGSRTFKIPVV-------PANMESVINDDLAIWLAE 64 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 + + F ++ + S +G YDF + Q L Sbjct: 65 NG-----YYYVMHRFEPEKRIPF-IKMMHKKGLFASISVGIKDSEYDFIDELVKQ---NL 115 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + L G + + Sbjct: 116 KPEYITIDV----------AHGHSVYVIKMIKYIKEKLPESFLT--AGNIATPEAVRELE 163 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + +L M ++ IA Sbjct: 164 NAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKVASK-PLIAD 212 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R+ DI KS+ GA++ + L +S V+ Sbjct: 213 GGIRHNGDIAKSVRFGATMV-MIGSMLAGHKESPGNVIK 250 >gi|12056405|emb|CAC21396.1| glutamate synthase large subunit [Thermotoga sp. RQ7] gi|12056409|emb|CAC21208.1| glutamate synthase large subunit [Thermotoga neapolitana] gi|12056417|emb|CAC21205.1| glutamate synthase large subunit [Thermotoga maritima] gi|12056419|emb|CAC21209.1| glutamate synthase large subunit [Thermotoga neapolitana] Length = 308 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 91/260 (35%), Gaps = 34/260 (13%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 62 NVALKTEIAPQLKLEVPVMFTAMSYGSISLNALL--SLARAARTIGTFFNTGEGGLPKEL 119 Query: 102 HNAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGL 149 + ++ + + + N G AV++ G + + + + Sbjct: 120 REFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMI 179 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + + L + + DL I + A P+ +K + +++G Sbjct: 180 PVGTDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGMVRAG 238 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQF 261 Y I G G + + + RD GIP ++ + E A Sbjct: 239 ADYIVIDGIRGGTGAAPKVTRDH----------VGIPIEFAIAVVDQRLREEGIRHMASI 288 Query: 262 IASGGLRNGVDILKSIILGA 281 + +GG+RN D++K+I LGA Sbjct: 289 VVAGGIRNSADVIKAIALGA 308 >gi|71901908|ref|ZP_00683965.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Ann-1] gi|71728328|gb|EAO30502.1| Glutamate synthase (ferredoxin) [Xylella fastidiosa Ann-1] Length = 1477 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 996 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 +A GGL+ G+D++K+ +LGA G Sbjct: 1051 EVHQALVANDLRERTTLQTDGGLKTGLDVVKAALLGADSFGFG 1093 >gi|302190939|ref|ZP_07267193.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus iners AB-1] gi|309805606|ref|ZP_07699649.1| GMP reductase [Lactobacillus iners LactinV 09V1-c] gi|312870712|ref|ZP_07730819.1| GMP reductase [Lactobacillus iners LEAF 3008A-a] gi|315653088|ref|ZP_07906016.1| GMP reductase [Lactobacillus iners ATCC 55195] gi|325913776|ref|ZP_08176137.1| GMP reductase [Lactobacillus iners UPII 60-B] gi|329919613|ref|ZP_08276602.1| GMP reductase [Lactobacillus iners SPIN 1401G] gi|308165107|gb|EFO67347.1| GMP reductase [Lactobacillus iners LactinV 09V1-c] gi|311093724|gb|EFQ52061.1| GMP reductase [Lactobacillus iners LEAF 3008A-a] gi|315489623|gb|EFU79257.1| GMP reductase [Lactobacillus iners ATCC 55195] gi|325476976|gb|EGC80127.1| GMP reductase [Lactobacillus iners UPII 60-B] gi|328937418|gb|EGG33840.1| GMP reductase [Lactobacillus iners SPIN 1401G] Length = 330 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 38/271 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D S++F + P++ M IN LA+ Sbjct: 12 YDDIQLVPNKCIIKSRKEADTSIKFGKRTFKLPVV-------PANMESVINEPLAVW--- 61 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + F + L +++ + ++ A L Sbjct: 62 --LAENDYYYVMHRFQPEKRADF--IKMMHDKGLFASISVGIKDEEYKFID-QLANEKLV 116 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++++ + I + + L G + + Sbjct: 117 PEYITIDV--------AHGHSDY--VIKMIKYIKEKLPESFLT--AGNIATPEAVRELEN 164 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + +L M + IA G Sbjct: 165 AGADATKVGIGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIADG 213 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G+R+ DI KS+ GAS+ + S F Sbjct: 214 GIRHNGDIAKSVRFGASMVMIGSLFAGHLES 244 >gi|229095182|ref|ZP_04226175.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-29] gi|228688263|gb|EEL42148.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-29] Length = 1478 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPNTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|238855436|ref|ZP_04645746.1| GMP reductase [Lactobacillus jensenii 269-3] gi|282933057|ref|ZP_06338447.1| GMP reductase [Lactobacillus jensenii 208-1] gi|313472724|ref|ZP_07813212.1| GMP reductase [Lactobacillus jensenii 1153] gi|238831926|gb|EEQ24253.1| GMP reductase [Lactobacillus jensenii 269-3] gi|239529305|gb|EEQ68306.1| GMP reductase [Lactobacillus jensenii 1153] gi|281302815|gb|EFA95027.1| GMP reductase [Lactobacillus jensenii 208-1] Length = 330 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 87/280 (31%), Gaps = 43/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 ++D L+ S E D SV+F + P++ M IN LAI A Sbjct: 12 YNDIQLVPNKCIIKSRKEADTSVKFGNRTFKIPVV-------PANMQSVINEQLAIWLAQ 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 M F + L +++ + ++ + V Sbjct: 65 NDYYYVM-------HRFQPEKRADF--IKMMHDKKLFASISVGIKDEEYTF--IDELVKQ 113 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 ++ ++ G++++ + I + M L G + + Sbjct: 114 -DLIPEYITIDVAH------GHSDY--VIKMIKYIKDKMPDSFLT--AGNVATPEAVREL 162 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + +L M ++ IA Sbjct: 163 ENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAASK-PIIA 211 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + L +S V+ Sbjct: 212 DGGIRYNGDIAKSVRFGASMV-MIGSMLAGHEESPGNVIK 250 >gi|226310252|ref|YP_002770146.1| inosine 5-monophosphate dehydrogenase [Brevibacillus brevis NBRC 100599] gi|226093200|dbj|BAH41642.1| inosine-5'-monophosphate dehydrogenase [Brevibacillus brevis NBRC 100599] Length = 499 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 79/286 (27%), Gaps = 81/286 (28%) Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 K ++ R+ P ++L +N + + + + V L + +I+ + Sbjct: 212 RKDYDSRKNNPLSLLDANKSYI-VGAGINTKDYKERVPAL--------VEAGVDILVIDS 262 Query: 165 NTNFADLSSKIALLSSA-MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 + F++ + +VP+ G + ++SG + + GG+ Sbjct: 263 SDGFSEWQRETVQFVKENFNVPI---GAGNVVDKEGFRYLVESGADFIKVGIGGGSICIT 319 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILK 275 E + G SL +E + GG+ + + Sbjct: 320 REQ------------KGIGRGQASSLIEVAAARDEYFKETGIYVPLCSDGGIVHDYHVTL 367 Query: 276 SIILGASLGGLASPFL--------------------------------------KPAMDS 297 ++ +GA L F K ++ Sbjct: 368 ALAMGADFVMLGRYFARFDESPTKKVKIGNNFVKEYWGEGSNRARNWQRYDTGGKSSLVF 427 Query: 298 SDAVVAA----------IESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + V + I+ + +M G+ + EL + Sbjct: 428 EEGVDSYVPYAGSLRENIDRTLSKIKSTMCNCGSLSISELQQKARI 473 >gi|161506798|ref|YP_001576752.1| inosine-5-monophosphate dehydrogenase [Lactobacillus helveticus DPC 4571] gi|160347787|gb|ABX26461.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus helveticus DPC 4571] Length = 380 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 45/270 (16%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +EVD S + KL+ PL+ + M + + Sbjct: 15 FDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPLVSAGM--------DTVTEGAMA 62 Query: 82 AAEKT--KVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAVQLNYDFGVQK 136 A + + + + + V N Sbjct: 63 IAMALQGGLGVVHKNMSIQAQASEVANVKSVVVPSNTTKAAVDDQNRLLCAAAVGVTSDT 122 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 +A +L A + ++ + + A + KI + L+ G + Sbjct: 123 FERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPKQTLI--AGNVAT 172 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +G+ + G+ + + G+P ++ A Sbjct: 173 GDATRALFDAGVDIVKVGIGPGSICTT------------RIVAGVGVPQITAIYDAASAA 220 Query: 257 NEA--QFIASGGLRNGVDILKSIILGASLG 284 E IA GG++ D++K++ G + Sbjct: 221 REYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|148543310|ref|YP_001270680.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri DSM 20016] gi|184152720|ref|YP_001841061.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri JCM 1112] gi|227364378|ref|ZP_03848470.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri MM2-3] gi|227543778|ref|ZP_03973827.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri CF48-3A] gi|300908844|ref|ZP_07126307.1| GMP reductase [Lactobacillus reuteri SD2112] gi|325683577|ref|ZP_08163093.1| GMP reductase [Lactobacillus reuteri MM4-1A] gi|148530344|gb|ABQ82343.1| guanosine monophosphate reductase [Lactobacillus reuteri DSM 20016] gi|183224064|dbj|BAG24581.1| GMP reductase [Lactobacillus reuteri JCM 1112] gi|227070564|gb|EEI08895.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri MM2-3] gi|227186242|gb|EEI66313.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus reuteri CF48-3A] gi|300894251|gb|EFK87609.1| GMP reductase [Lactobacillus reuteri SD2112] gi|324977927|gb|EGC14878.1| GMP reductase [Lactobacillus reuteri MM4-1A] Length = 324 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 91/280 (32%), Gaps = 45/280 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD L+ S + D SV+F P++ M I+ +LAI A Sbjct: 6 YDDIQLVPNKCVIKSRKDADTSVKFGPHTFKIPVV-------PANMESVIDEDLAIWLAQ 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVH 142 M + +F + L +++ + ++ + + Sbjct: 59 NDYYYVM-------HRFNPETRAAF--VKMMHEKGLFASISVGIKDDEYNFIDQLKS--E 107 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + +G+++F + I + + + G + + Sbjct: 108 QLNPEYITIDV--------AHGHSDF--VIKMIQYIKEKLPDTFVT--AGNVATPEAVRD 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + ++ + I Sbjct: 156 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQLS---AIRWCAKAARK-PII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R+ DI KS+ GAS+ + L ++S V+ Sbjct: 205 ADGGIRHNGDIAKSVRFGASMV-MIGSMLAGHLESPGHVI 243 >gi|169830110|ref|YP_001700268.1| guanosine 5'-monophosphate oxidoreductase [Lysinibacillus sphaericus C3-41] gi|226739793|sp|B1HNS5|GUAC_LYSSC RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|168994598|gb|ACA42138.1| GMP reductase [Lysinibacillus sphaericus C3-41] Length = 327 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 89/268 (33%), Gaps = 44/268 (16%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + E S E D SV G P++ M I+ LA Sbjct: 7 YEDIQLIPAKCIVE-SRSECDTSVTLGGHTFKLPVV-------PANMQTIIDETLAK--- 55 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHV 143 K+A + A +F Q + LI+++ GV++ A + Sbjct: 56 --KLAENGYFYIMHRFQPEARVNF--IQDMHGSGLIASIS-------VGVKEEEYAFIEE 104 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L A N + E I + ++ + I + + ++ G + + Sbjct: 105 LAA------TNLVPEFITIDIAHGHSNAVIRMIQHIKKHLPNSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L + I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAATK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KS+ GAS+ + S F Sbjct: 206 ADGGIRTHGDIAKSVRFGASMVMIGSLF 233 >gi|329115657|ref|ZP_08244379.1| Glutamate synthase large chain [Acetobacter pomorum DM001] gi|326695085|gb|EGE46804.1| Glutamate synthase large chain [Acetobacter pomorum DM001] Length = 1534 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 34/180 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + + G+ Sbjct: 1051 VTVKLVARSGIGTIAAGVAKAKADAILISGHCGGTGASPLSSI-----KYAGLPWELGLA 1105 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------- 288 + M + + A GG++ G D++ + +LGA G+ + Sbjct: 1106 ETHQVLMLNRLRHRVRLRADGGIKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHS 1165 Query: 289 -----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P ++ + + + V+ + ++ + LG + + E+ T L+R Sbjct: 1166 NTCPVGVCSQDPKMRAKFEGTPEKVINLFSFIAEDVRNILASLGFRSLNEIIGRTDLLRQ 1225 >gi|281491640|ref|YP_003353620.1| GMP reductase [Lactococcus lactis subsp. lactis KF147] gi|281375358|gb|ADA64871.1| GMP reductase [Lactococcus lactis subsp. lactis KF147] Length = 329 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCVINSRSEADTSVKLGNFTFKLPVV-------PANMQTIIDDKIAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + + +F +++ ++ S GV+ A + + Sbjct: 63 EG-----YFYIMHRFEAENRAAF-IKKMHQQGLIAS--------ISVGVKADEHAFIREI 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIEL 202 AD L E I + AD K L + ++ VG + + Sbjct: 109 SADALIP------EFITIDIAHGHADSVIKTIQLIKRLMPQTFVIAGNVG---TPEAVRE 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +++ ++ I Sbjct: 160 LENAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVKWCAKAASK-PVI 208 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R DI KSI +GA++ + S F V + ++ Sbjct: 209 ADGGIRTHGDIAKSIRMGATMVMVGSLFAAHEESPGQTVERDGQLFKE 256 >gi|288960840|ref|YP_003451180.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Azospirillum sp. B510] gi|288913148|dbj|BAI74636.1| FMN-dependent alpha-hydroxy acid dehydrogenase [Azospirillum sp. B510] Length = 411 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 21/146 (14%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLE 231 +A PL++K + L D + + G ++ GG + + D Sbjct: 266 WESVARFRDVWRGPLIVKGI---LHPDDADKAVSLGADGILVSNHGGRQFDAAPAAIDAL 322 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I A + G + +G+D+L++ GA+ FL Sbjct: 323 PAIEE-----------------RVRGRATVLVDGSMVSGLDLLRARRRGAAAAFAGRAFL 365 Query: 292 KP-AMDSSDAVVAAIESLRKEFIVSM 316 A +D + + +EF ++ Sbjct: 366 MAYAAAGADGLDHVVRLFTEEFRTAL 391 Score = 37.5 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 86/282 (30%), Gaps = 42/282 (14%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--TGGNNKMI 72 D G+ RN++ D ++ R I V G+ + P+ ++ M G Sbjct: 61 DDHGLARNRQALDAIQIVPRY--GIDLRGVSTETTLFGRGYALPVGVAPMGLAGLLWPDA 118 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 + A A V V + + + + AP + ++ Sbjct: 119 DEAIAAAAQRARIPYVMSTVANSSIE----------RIARIAPDVFWYQLYNVPENDHAV 168 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + +A GA L L ++ P + D+ + + V Sbjct: 169 SLDLIRRA-QAAGAHALVLTMDV------PVRSKRVRDVRNGLV--------------VP 207 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF-----QDWGIPTPL 247 + ++ + + RG + E + ++ G + + G T Sbjct: 208 FRPTLRTAWDVARAPLWALAMLRRGQPRFFNFEPYLGPDASTGDLAGFVYQKMTGPLTWE 267 Query: 248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 S+ R I G + + D K++ LGA +++ Sbjct: 268 SVARFRDV-WRGPLIVKG-ILHPDDADKAVSLGADGILVSNH 307 >gi|225621112|ref|YP_002722370.1| inositol-5-monophosphate dehydrogenase [Brachyspira hyodysenteriae WA1] gi|225215932|gb|ACN84666.1| inositol-5-monophosphate dehydrogenase [Brachyspira hyodysenteriae WA1] Length = 373 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 95/293 (32%), Gaps = 56/293 (19%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 FDD L+ + +I +V + K L+ PL+ S M + + + A Sbjct: 11 FDDVLLVPKE-SDILPKDVTLRRKLTKKITLNTPLISSPM--------DTVTESKMAIAM 61 Query: 85 KTKVAMAVGSQRVMFSDH----NAIKSFELRQYAPHTVL--------ISNLGAVQLNYDF 132 A+ V + + +KSF+ + L + +G + Y+ Sbjct: 62 ALCGALGVIHKNMPLEQQAKEVEIVKSFKDIEDKEKATLSEDGSLIAAAAIGISEDRYER 121 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEV 191 + V ++ D H ++ + I + V ++ Sbjct: 122 IEKLIEAKVDLIVIDTAHGH---------------SKNVLTAIKEIKDKYKQVEVIA--- 163 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G ++ + + +G+ I G+ + + G+P ++ Sbjct: 164 GNIATADGAKALIDAGVDAIKIGIGAGSICTT------------RIIAGVGVPQLTAIHD 211 Query: 252 ARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A + IA GG++ DI+K+ +GA +A ++ V+ Sbjct: 212 ASEIAKKYNIGAIADGGIKYSGDIVKAFAIGADAV-MAGGLFSSTYEAPGDVI 263 >gi|167041745|gb|ABZ06488.1| putative conserved region in glutamate synthase [uncultured marine microorganism HF4000_010L19] Length = 1363 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 35/197 (17%) Query: 170 DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESH 227 DL+ I L + +K V K+ I+G GGT S S Sbjct: 997 DLAQLIYDLKQTNPYARVGVKLVASTGVGTIAAGVAKAKADVILISGHSGGTGASPQTSI 1056 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + + G+ + + GG++ G D++ + ++GA G+ Sbjct: 1057 KHVGIP-----WEMGLTEANQILTLNGLRQQVTLRTDGGIKTGRDVVMAAMMGAEEFGIG 1111 Query: 288 SPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSMFLL 319 + L K + + VV + +E + L Sbjct: 1112 TTSLVAMGCIMVRQCHSNTCPVGVCTQDEDLRKKFTGTPEKVVNLFTFIAQEVREILAGL 1171 Query: 320 GTKRVQELYLNTALIRH 336 G K + E+ T L++ Sbjct: 1172 GFKTLNEIIGRTDLLKQ 1188 >gi|12056411|emb|CAC21216.1| glutamate synthase large subunit [Thermotoga sp. SG1] Length = 308 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 90/260 (34%), Gaps = 34/260 (13%) Query: 43 EVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 V E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 62 NVALKTEIAPQLKLEVPVMFTAMSYGSISLNALL--SLARAARTIGTFFNTGEGGLPKEL 119 Query: 102 HNAIKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGL 149 + ++ + + + N G AV++ G + + + + Sbjct: 120 REFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMI 179 Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + + L + + DL I + A P+ +K + +++G Sbjct: 180 PVGTDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGMVRAG 238 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQF 261 Y I G G + + + RD GIP ++ + E A Sbjct: 239 ADYIVIDGIRGGTGAAPKVTRDH----------VGIPIEFAIAVVDQRLREEGIRHMASI 288 Query: 262 IASGGLRNGVDILKSIILGA 281 + GG+RN D++K+I LGA Sbjct: 289 VVGGGIRNSADVIKAIALGA 308 >gi|320161028|ref|YP_004174252.1| putative glutamate synthase [Anaerolinea thermophila UNI-1] gi|319994881|dbj|BAJ63652.1| putative glutamate synthase [Anaerolinea thermophila UNI-1] Length = 1546 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 104/272 (38%), Gaps = 43/272 (15%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNN-----KMIERINRNLAIAA---EKTKVAM 90 +S +EVD SV G L P++I +M+ G+ K L I E ++ Sbjct: 884 LSPEEVDVSVN--GYDL--PVVIDAMSYGSQGENSFKSYIHAASILNIICINGEGGELPE 939 Query: 91 AVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 +G R A F + +VL +G + G+ ++ + Sbjct: 940 ILGKYRHNRGQQVASGRFGVNAEFLNSASVLEIKIGQGAKPGEGGMLPGYKVTPKV---A 996 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLK-EVGCGLSSMDIEL 202 P ++ P+ N + + +A L + + + +K V G+ + + + Sbjct: 997 RARRTPPFVTLLSPSNNHDLYSIED-LAQLIEELKMVNPQAKISVKVPVVPGIGVIAVGI 1055 Query: 203 GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY------ 255 K+G +I+G GGT + Q G+PT + + A Sbjct: 1056 A-KAGADIINISGYDGGT-----------GAARKHSLQYVGLPTEIGIIQAHRALLAAGI 1103 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 ++ + A+GG++ G D +K I+LGA+ G A Sbjct: 1104 RHKVELWANGGMKTGADAVKMILLGANRVGFA 1135 >gi|315172577|gb|EFU16594.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX1346] Length = 334 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 25 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 82 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + + +V + + L +Q Sbjct: 83 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELSFLSVSGMNYEENIAILKKVQ 139 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 140 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 199 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 200 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 259 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 260 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 312 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 313 QEIMAAKGYESIEEFR 328 >gi|206901405|ref|YP_002250467.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum H-6-12] gi|206740508|gb|ACI19566.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum H-6-12] Length = 493 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 33/215 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D +K + LI+ GA G + +A ++ A+ + ++ Sbjct: 198 ITIKDIQKMKQYPNAAKDKKGRLIA--GAA---IGVGEEAIKRAKALVEAEVDVIVVDTA 252 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + L +++ G ++ + + +G + Sbjct: 253 --------HGHHKRVLETVNELKKLFSKEVVI-VAGNVATAEGTKALIDAGADVVKVGIG 303 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDIL 274 G+ + V G+P ++ + IA GG++ DI Sbjct: 304 PGSICTT------------RVVAGIGVPQFSAIWECAKEAKKYNVPIIADGGIKFSGDIT 351 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 K+I GA L + ++ IE + Sbjct: 352 KAIAAGAHAV-----MLGSLLAGTEESPGEIEIYQ 381 >gi|312622159|ref|YP_004023772.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] gi|312202626|gb|ADQ45953.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor kronotskyensis 2002] Length = 488 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 62/237 (26%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D ++ L A V +++ + G S ++ +AG + + E Sbjct: 229 RDTDERVDALVKA-QVDVIVVDTAHGHSKGVIETVKRIKSRYPHIQVVAG----NIATAE 283 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ E IA GG+R Sbjct: 284 AARDLIEAGADCVKVGIGPGSICTTRVVAGIGVPQITAIMDVAEVAKEYGIPVIADGGIR 343 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI K++ GA + + S F Sbjct: 344 YSGDITKALAAGADVVMIGSLFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRY 403 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + L M G + ++EL ++ Sbjct: 404 FQEDASKLVPEGVEGRVPYKGPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|241556171|ref|XP_002399617.1| glycolate oxidase, putative [Ixodes scapularis] gi|215499694|gb|EEC09188.1| glycolate oxidase, putative [Ixodes scapularis] Length = 276 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 91/286 (31%), Gaps = 57/286 (19%) Query: 40 SFDEVDPSVEFLG-KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKT--KVAMAVGSQR 96 + E V LG +KLS P+ IS + + + +A+A M + S Sbjct: 14 NVAERRIEVTLLGDQKLSMPVGISPTA---FQKLAHPDGEIAVAKAAQAAGTLMTLSSFS 70 Query: 97 VM-FSD-----HNAIKSFEL-----RQYAPHTVLISN---LGAVQLNYDFGVQKAHQAVH 142 D ++ F+L R++ V + AV L D V+K Sbjct: 71 NDCLEDVQRGAPGGLRWFQLFLFRDREFTRDLVKRAERSGYRAVVLTVDMPVRKTPDFAK 130 Query: 143 VLGA-----------DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + G+ H + ++ + + + + + L S +P++ K + Sbjct: 131 MSDFCIPEHLRHGNFLGISRHEDANPKLAGYDDLRDPSVTWADVTWLRSITKLPVVAKGI 190 Query: 192 GCGLSSMDIELGLKSGIRYFD---IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G R F ++ G + RIE+ D+ Sbjct: 191 CTGSLFCT--QLSTGAPRDFTKSAVSKLGTVNPLRIEALPDI------------------ 230 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + GG+R D++K++ LGA + P L Sbjct: 231 ---VSAVRGRVEIYLDGGVRRVPDVVKALALGAKAVFIGRPALWGL 273 >gi|238898979|ref|YP_002924661.1| IMP dehydrogenase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466739|gb|ACQ68513.1| IMP dehydrogenase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 480 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 58/220 (26%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I ++ G ++ + +G+ + G+ + Sbjct: 256 GVLQRIRDTRKKYPELQIVG--GNVATAEGALALVDAGVNAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T +S + IA GG+R DI K+I GAS + Sbjct: 308 ------RIVTGVGVPQITAISDAVTALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMVG 361 Query: 288 SPF--------------------------LKPAMDSS----------------DAVVAAI 305 S F L S + V + Sbjct: 362 SMFAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQLDNAADKLVPEGVEGRV 421 Query: 306 --ESLRKE--------FIVSMFLLGTKRVQELYLNTALIR 335 + L K+ M L G + EL +R Sbjct: 422 PYKGLLKDVVYREMGGLRSCMGLTGCASIDELRTKPEFVR 461 >gi|157737269|ref|YP_001489952.1| inosine 5'-monophosphate dehydrogenase [Arcobacter butzleri RM4018] gi|315636986|ref|ZP_07892210.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22] gi|157699123|gb|ABV67283.1| inosine-5-monophosphate dehydrogenase [Arcobacter butzleri RM4018] gi|315478816|gb|EFU69525.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22] Length = 481 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 27/196 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 ++ P+ G +++ GV + +A ++ + ++ L + + + + Sbjct: 202 KREYPNACK-DEFGRLRVGAAIGVNQLDRARALV-----AVGVDVL---VLDSAHGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + + M+V L+ V ++ +K+G + G+ + Sbjct: 253 ILDTVKAIKAEMNVQLIAGNVA---TAEATADLIKAGADAVKVGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEM--ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P +++ A IA GG++ D+ K++ +GAS + Sbjct: 303 -----RIVAGVGVPQISAIDECAAEGAKTGTPIIADGGIKYSGDVAKALAVGASAV-MMG 356 Query: 289 PFLKPAMDSSDAVVAA 304 L +S VV Sbjct: 357 SALAGTDESPGEVVLY 372 >gi|301056920|ref|YP_003795131.1| guanosine 5'-monophosphate oxidoreductase [Bacillus anthracis CI] gi|300379089|gb|ADK07993.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus biovar anthracis str. CI] Length = 327 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 109 -------HLTP--EYITIDIAHGHSNAVINMIQHIKRHLPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|254283662|ref|ZP_04958630.1| L-lactate dehydrogenase (cytochrome) [gamma proteobacterium NOR51-B] gi|219679865|gb|EED36214.1| L-lactate dehydrogenase (cytochrome) [gamma proteobacterium NOR51-B] Length = 124 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER 74 + + RN FDD+ L+ R L ++D LG + P +S TG + Sbjct: 35 DEISLRRNSSAFDDYELLPRYL--NDVQQIDLGTRVLGLDIQLPFFLSP-TGTSRLFHHH 91 Query: 75 INRNLAIAAEKTK 87 +A AA + Sbjct: 92 KELGVARAAAEAG 104 >gi|149377293|ref|ZP_01895039.1| Glutamate synthase domain 2 [Marinobacter algicola DG893] gi|149358390|gb|EDM46866.1| Glutamate synthase domain 2 [Marinobacter algicola DG893] Length = 1482 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 37/173 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT+ S + S R S + G+ Sbjct: 996 VSVKLVSEPGVGTIAAGVAKAYADLITVSGYDGGTAASPLTSIRYAGSP-----WELGLS 1050 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLK--P 293 T +L A + + GG++ G+D++K ILGA + L +L+ Sbjct: 1051 ETQQALR-ANDLRGKIRLQTDGGIKTGLDVVKGAILGAESFGFGTTPMVALGCKYLRICH 1109 Query: 294 AMDSSDAVVAAIESLRK-------------------EFIVSMFLLGTKRVQEL 327 + + V E LR+ E M LG + ++EL Sbjct: 1110 LNNCATGVATQNEHLREEHFKGTVEMAMNFFRFVATETREWMAKLGVRNLEEL 1162 >gi|33322511|gb|AAQ06983.1|AF496309_1 lactate 2-monooxygenase [Lactobacillus delbrueckii subsp. lactis] Length = 128 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 11/122 (9%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 EFLG KL P++IS + I+ A A + A+A + ++ Sbjct: 1 EFLGMKLKTPIMISPIA------CHGISHADAEVATQKGAALAGAMFTSSTYGNKPVE-- 52 Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL-QEIIQPNGNTN 167 E+ AP + L + N+DF + A++ G + L ++ L + N TN Sbjct: 53 EIAAAAPDAPRMFQL-YLSKNWDFN-KMVFDAINAAGYKAILLTVDALVSGYREANLRTN 110 Query: 168 FA 169 FA Sbjct: 111 FA 112 >gi|325108885|ref|YP_004269953.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis DSM 5305] gi|324969153|gb|ADY59931.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis DSM 5305] Length = 497 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 18/140 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + A++ + + + D+ ++ V + + L +G+ + G+ + Sbjct: 250 HSANVIATVQEIKKQWDIDVIAGNVA---TLEGAKALLDAGVDAVKVGIGPGSICTT--- 303 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILKSIILGASLG 284 + G+P ++ A +E I GG+R DI K++ GA Sbjct: 304 ---------RIISGVGVPQLTAISEAARGLLGSEVPLIGDGGIRYSGDIAKALASGAHSV 354 Query: 285 GLASPFLKPAMDSSDAVVAA 304 + L +S ++ Sbjct: 355 -MLGGLLAGLDESPGELILY 373 >gi|239997020|ref|ZP_04717544.1| inosine 5'-monophosphate dehydrogenase [Alteromonas macleodii ATCC 27126] Length = 489 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 63/224 (28%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + DV ++ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRADYPDVQIIAGNVATG---DGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K++ GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVEALKDTDIPVIADGGIRFSGDIAKALAAGASCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEEAPGEVELFQGRYYKSYRGMGSLGAMDQSHGSSDRYFQDSDNAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G ++EL +R Sbjct: 420 EGRVAYKGPIANIIHQQMGGLRSAMGLTGCATIEELNTKAQFVR 463 >gi|315186134|gb|EFU19896.1| dihydroorotate oxidase [Spirochaeta thermophila DSM 6578] Length = 326 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 102/300 (34%), Gaps = 48/300 (16%) Query: 46 PSVEFLGKKLSFPLLISSM-------------TGGNNKMIER--INRNLAIAAEKT---- 86 S +LG L PL++ + T G ++ R +A E Sbjct: 3 LSTRYLGLSLKNPLIVGASPLTADVSHLVSCETHGAAAVVLRSLFQEEIAEGVEHLKSLS 62 Query: 87 -KVAMAVGSQRVMFSDHNAIKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 F A++++ L + A + I + ++ + +A + Sbjct: 63 EGFHTEGADYLTHFGTQQALEAYLSLVREAKDRLSIPVIASLNCSSREWWAEAASRIEEA 122 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS----SAMDVPLLLKEVGCGLSSMDI 200 GAD L L++ P N + + +I + SA+ VP+ +K S Sbjct: 123 GADALELNVAP----FPSNDAESSQEAEERIYDIVRTARSAVSVPIAVKVGPYFTS---- 174 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP---------LSLEM 251 L + + G GG D++ + + P +LE Sbjct: 175 ---LGHLLARIEALGAGGVVLFNRFYQVDIDPSRRRLVSGHRLSDPHEFSHTLRWTALEA 231 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 R AS G+ +G+DI K+++ GAS + S L+ + ++ +E+ E Sbjct: 232 PRR---NLDIAASCGIHSGLDIAKAVLAGASAVQVVSAVLRHGFGHIEKMLHELEAWLSE 288 >gi|308049268|ref|YP_003912834.1| 2-nitropropane dioxygenase NPD [Ferrimonas balearica DSM 9799] gi|307631458|gb|ADN75760.1| 2-nitropropane dioxygenase NPD [Ferrimonas balearica DSM 9799] Length = 354 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 10/101 (9%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 + + + + +G+ G HR D G+ T L Sbjct: 153 LASATTPDEAQRVADAGVDAVVAQG------IEAGGHRGQFDPDAP---DPGLTTAE-LV 202 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + IA+GG+ +G D K + LGA+ L + F+ Sbjct: 203 TLLSGAMDKPIIAAGGIMDGTDAAKMLALGATAVQLGTAFV 243 >gi|242373634|ref|ZP_04819208.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis M23864:W1] gi|242348602|gb|EES40204.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis M23864:W1] Length = 325 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 91/288 (31%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D S++F + P++ M +N LA A+ Sbjct: 6 YEDIQLIPNKCIVNSRSECDTSIKFGPRSFKLPVV-------PANMQTVMNEELAQWFAK 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH-QAVHV 143 + F+ + P + N G + + GV+ + V Sbjct: 59 NDYFYIM--------------HRFDEKARIPFIKKMQNEG-LFASISVGVKDNEFKFVEE 103 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L ++ L + E I + +D + + I + + + ++ G + + Sbjct: 104 LASESL------VPEYITIDIAHGHSDSVINMIKHIKTYLPESFVI--AGNVGTPEGVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W L+ I Sbjct: 156 LENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GGLR DI KSI GAS+ + S F + V + ++ Sbjct: 205 ADGGLRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELEGKKYKE 252 >gi|229824572|ref|ZP_04450641.1| hypothetical protein GCWU000282_01916 [Catonella morbi ATCC 51271] gi|229785943|gb|EEP22057.1| hypothetical protein GCWU000282_01916 [Catonella morbi ATCC 51271] Length = 310 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 101/319 (31%), Gaps = 42/319 (13%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK 106 FLG L+ PL+ ++ +G + + ++ AA A R + Sbjct: 4 ETSFLGITLANPLM-NA-SGVHCMTVAEMDELAQSAAGAFVTKTATRDYRAGNPQPRYVD 61 Query: 107 --------------------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + L + + L V L+YD V+ + + Sbjct: 62 VPLGSINSMGLPNEGLAYYLDYCLARQNQQALQF--LSVVGLSYDEIVEN-LRTIEASDY 118 Query: 147 DGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIEL 202 G+ +L+ +P +F + + S PL LK + + Sbjct: 119 QGVTEFNLSCPNVPGKPQIAYDFELTERLLTEVFSFFTKPLGLKLPPYFDIAHFDQMAAI 178 Query: 203 GLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYC 256 + + Y + G + + + G + D+ PT L+ A + Sbjct: 179 LNRFPLTYVNCVNSIGNGLYIDVDKEQVVIKPKGGFGGLGGDYIKPTALANVRAFHQRLN 238 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 + I +GG+R G D+ + I+ GASL + + + V E L E M Sbjct: 239 PSIKIIGTGGVRTGQDVFEHILCGASLVQVGTAL------HQEGV-GIFERLVAELEAIM 291 Query: 317 FLLGTKRVQELYLNTALIR 335 G +++ I Sbjct: 292 EAKGYTCLEDFQGKLREIN 310 >gi|260913038|ref|ZP_05919523.1| inosine-5'-monophosphate dehydrogenase [Pasteurella dagmatis ATCC 43325] gi|260633028|gb|EEX51194.1| inosine-5'-monophosphate dehydrogenase [Pasteurella dagmatis ATCC 43325] Length = 508 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 80/295 (27%), Gaps = 81/295 (27%) Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 + M + + KS + +GA + G ++ A+ G D L + Sbjct: 214 KGMITLKDYQKSEQKPNACKDEFGRLRVGAA-VGAGPGNEERIDALVKAGVDVLLI---- 268 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + + + + ++ + ++P++ G ++ +G + Sbjct: 269 ------DSSHGHSEGVLQRVRETRAKYPNLPIIA---GNIATAEGAIALADAGASAVKVG 319 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVD 272 G+ + + G+P ++ A + IA GG+R D Sbjct: 320 IGPGSICTT------------RIVTGVGVPQITAIADAAEALKDRGIPVIADGGIRFSGD 367 Query: 273 ILKSIILGASLGGLASPFL----------------------------------------- 291 I K+I GAS + S F Sbjct: 368 ISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMSKGSSDRYFQSD 427 Query: 292 ----KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + I M L G ++EL +R Sbjct: 428 NAADKLVPEGIEGRIPYKGFLKEIIHQQMGGLRSCMGLTGCATIEELRTKAQFVR 482 >gi|302876939|ref|YP_003845572.1| 2-nitropropane dioxygenase NPD [Clostridium cellulovorans 743B] gi|307687628|ref|ZP_07630074.1| 2-nitropropane dioxygenase NPD [Clostridium cellulovorans 743B] gi|302579796|gb|ADL53808.1| 2-nitropropane dioxygenase NPD [Clostridium cellulovorans 743B] Length = 356 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 79/233 (33%), Gaps = 48/233 (20%) Query: 80 AIAAEKTKVAMAVGSQRVMFSDHNAIKSFE-------------LRQYAPHTVLISNLGAV 126 A A + + + +Q V + + + I + + RQ +P ++ N+ Sbjct: 33 AAVANEGGIGIISAAQ-VGYREPDFINNAKEANIRALRAELRKARQLSPEGIIGVNVMVA 91 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-- 184 NYD AV AD + + A L S + L + Sbjct: 92 TNNYD---DLVKVAVEE-KADVII----------------SGAGLPSHLPKLVEGSETKI 131 Query: 185 -PLLLKEVGCGLSSMDIELGLKSGIRYFDI-----AGRGGTSWSRIESHRDLESDIGIVF 238 P++ + + + + I G G ++ H D+ +F Sbjct: 132 APIVSSGKAAKIITKVWKDKYSYLPDFIVIEGPEAGGHLGFKMDELQEH--TNDDLETIF 189 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +D L+ + E I +GG+ G DI K + LGAS +A+ F+ Sbjct: 190 KDV----KEELKAFQEDGVEIPIIVAGGIYTGQDIAKFLKLGASGVQMATRFI 238 >gi|226290467|gb|EEH45951.1| ferredoxin-dependent glutamate synthase [Paracoccidioides brasiliensis Pb18] Length = 2003 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 919 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 978 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 979 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1033 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1034 LRTGRDVAMACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPVLRQKFQGTP 1093 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1094 EHVINFFYYIANELRAIMAKLGIRTINEMVGRADLLK 1130 >gi|170042901|ref|XP_001849147.1| glutamate synthase [Culex quinquefasciatus] gi|167866321|gb|EDS29704.1| glutamate synthase [Culex quinquefasciatus] Length = 2085 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L + + +K V + K + I+G GGT SW+ I Sbjct: 1047 DLAELIYDLKCANPKARVSVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1106 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +S + + G+ + + + A G LR G D++ + ILGA Sbjct: 1107 KS--------AGLPWELGVAETHQVLVLNDLRSRVVVQADGQLRTGFDVVVAAILGADEF 1158 Query: 285 GLAS---------------------------PFLKPAMDS-SDAVVAAIESLRKEFIVSM 316 G ++ P L+ + V+ L +E M Sbjct: 1159 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPVLRAKFAGKPEHVINFFFMLAEEIREIM 1218 Query: 317 FLLGTKRVQELYLNTALIR 335 LG ++ QEL T L++ Sbjct: 1219 ASLGLRKFQELIGRTDLLQ 1237 >gi|257868003|ref|ZP_05647656.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC30] gi|257874333|ref|ZP_05653986.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC10] gi|257876899|ref|ZP_05656552.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC20] gi|257802086|gb|EEV30989.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC30] gi|257808497|gb|EEV37319.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC10] gi|257811065|gb|EEV39885.1| guanosine monophosphate reductase 2 [Enterococcus casseliflavus EC20] Length = 325 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V G P++ M I+ ++A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGGHSFKMPVV-------PANMQTIIDDSIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F +++ ++ S V+ N V++ A L Sbjct: 59 NG-----YFYIMHRFDEEARIPF-IKKMKSRGLIASISVGVKENEYAFVEEL--ADKELV 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + +G++N + + I + + ++ G + + Sbjct: 111 PDFITIDI--------AHGHSNA--VINMIQHIKKHLPATFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|229009949|ref|ZP_04167168.1| Glutamate synthase, large subunit [Bacillus mycoides DSM 2048] gi|228751380|gb|EEM01187.1| Glutamate synthase, large subunit [Bacillus mycoides DSM 2048] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLESGMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|330813578|ref|YP_004357817.1| glutamate synthase [NADPH] large chain [Candidatus Pelagibacter sp. IMCC9063] gi|327486673|gb|AEA81078.1| glutamate synthase [NADPH] large chain [Candidatus Pelagibacter sp. IMCC9063] Length = 1503 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 33/196 (16%) Query: 170 DLSSKIALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DL+ I L + +K V K+ I+G G + + Sbjct: 1002 DLAQLIYDLKQINSKARVGVKLVSSSGIGTIAAGVAKAKADIILISGHNGGTGATP---- 1057 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + G+ + ++ GG++ G D++ + ++GA G+A+ Sbjct: 1058 QTSVKYVGLPWEMGLTETNQILTLNSLRHKVVLRTDGGIKTGRDVVIAAMMGADEFGIAT 1117 Query: 289 PFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 L K + + VV + +E + LG Sbjct: 1118 TSLVAMGCIMVRQCHSDTCPVGICTQNEDLRKKFTGTPEKVVNLFTFVAEEVREILAELG 1177 Query: 321 TKRVQELYLNTALIRH 336 K + E+ T L+R Sbjct: 1178 FKSLDEVIGRTDLLRQ 1193 >gi|312868967|ref|ZP_07729147.1| putative inosine-5'-monophosphate dehydrogenase [Lactobacillus oris PB013-T2-3] gi|311095531|gb|EFQ53795.1| putative inosine-5'-monophosphate dehydrogenase [Lactobacillus oris PB013-T2-3] Length = 380 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 46/300 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EV+ S + KL+ PL+ + M T G Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVNLSTQLAKNIKLNIPLISAGMDTVTEGP 60 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAV-Q 127 + + L + + M++ +Q ++ +KS + A + + Sbjct: 61 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVVVPANATKAAVDDQKRLLCT 113 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPL 186 +A +L A + ++ + + A + KI + D L Sbjct: 114 AAVGVTSDTFERATALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPDATL 165 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 + V G + +G+ + G+ + V G+P Sbjct: 166 IAGNVATG---EATKALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 ++ A E IA GG++ D++K++ G + + L ++ V Sbjct: 211 TAIYDAASVAREYGKPIIADGGIKYSGDVVKALAAGGNAV-MLGSMLSGTTEAPGEVFEE 269 >gi|255322409|ref|ZP_05363555.1| inosine-5'-monophosphate dehydrogenase [Campylobacter showae RM3277] gi|255300782|gb|EET80053.1| inosine-5'-monophosphate dehydrogenase [Campylobacter showae RM3277] Length = 482 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 69/194 (35%), Gaps = 27/194 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ + G +++ GV + +A + A + ++ + + Sbjct: 202 RKEYPNANKDA-YGRLRVAAAIGVGQMDRAKALAEAGVDVIVIDSA--------HGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + + + V ++ G + ++ ++G + G+ + Sbjct: 253 VLDTLRQVKAELKVDVVA---GNIANPAAVKDLAEAGADGIKVGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEM--ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G+P +++ A IA GGL+ D+ K++ GAS +A Sbjct: 303 -----RVVAGVGVPQIFAVDSCSAEAAKYGIPVIADGGLKYSGDVAKALAAGASCV-MAG 356 Query: 289 PFLKPAMDSSDAVV 302 L ++ V+ Sbjct: 357 SLLAGCEETPGEVI 370 >gi|87201188|ref|YP_498445.1| glutamate synthase (NADH) large subunit [Novosphingobium aromaticivorans DSM 12444] gi|87136869|gb|ABD27611.1| glutamate synthase (NADH) large subunit [Novosphingobium aromaticivorans DSM 12444] Length = 1546 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 993 HSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNVNTGARISVKLVSEVGVGTVAAGVSKAR 1052 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S S I + T +L + + A GG Sbjct: 1053 ADHVTISGYEGGTGASPLTSLTHAGSPWEIGLAE----TQQTLLL-NNLRSRICVQADGG 1107 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ Sbjct: 1108 LRTGRDVAIAALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRARFTGQP 1167 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + +E M +G + + E+ Sbjct: 1168 EHVINYFFFVAEELRAIMAEMGFRTIAEM 1196 >gi|228942604|ref|ZP_04105136.1| GMP reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975534|ref|ZP_04136086.1| GMP reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982170|ref|ZP_04142459.1| GMP reductase [Bacillus thuringiensis Bt407] gi|228777522|gb|EEM25800.1| GMP reductase [Bacillus thuringiensis Bt407] gi|228784144|gb|EEM32171.1| GMP reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817030|gb|EEM63123.1| GMP reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943253|gb|AEA19149.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 328 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAE----- 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 HL P E I + ++ + + I + + ++ G + + Sbjct: 110 -------HLTP--EYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVREL 158 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 159 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 207 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 208 DGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIERDGKLYKE 254 >gi|330993413|ref|ZP_08317348.1| Glutamate synthase [NADPH] large chain [Gluconacetobacter sp. SXCC-1] gi|329759443|gb|EGG75952.1| Glutamate synthase [NADPH] large chain [Gluconacetobacter sp. SXCC-1] Length = 1509 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 57/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + +S + + G+ Sbjct: 1028 VTVKLVARSGIGTIAAGVAKAKADAILISGHSGGTGASPQSSV----KYAGMPWELGLAE 1083 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------------- 291 + M + + A GGL+ G D++ + +LGA G+ + L Sbjct: 1084 AHQVLMLNRLRHRVKLRADGGLKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1143 Query: 292 --------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + + V+ + ++ + LG + E+ T L+ Sbjct: 1144 TCPVGVCTQDDELRRKFEGTPEKVINLFSFIAEDVRNILASLGFATLNEIIGRTDLLHQ 1202 >gi|305675799|ref|YP_003867471.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23] gi|305414043|gb|ADM39162.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 326 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV + P++ M I+ LAI Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGERTFKLPVV-------PANMQTIIDEKLAI---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 ++A + + F ++ + S +G Y+F Q A + Sbjct: 56 -QLAENGYFYVMHRFEPETRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|195170717|ref|XP_002026158.1| GL16188 [Drosophila persimilis] gi|194111038|gb|EDW33081.1| GL16188 [Drosophila persimilis] Length = 782 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S + + +K V + K + I+G GGT SW+ I Sbjct: 321 DLAELIYDLKCSNPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 380 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 381 KN--------AGMPWELGIAETHQVLVLNNLRSRVIVQADGQLRTGFDVVVAALLGADEF 432 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L ++ M Sbjct: 433 GFSTAPLIVMGCTMMRKCHLNTCPVGIATQDPELRKKFTGKPEHVINFFFMLAEDIRKIM 492 Query: 317 FLLGTKRVQELYLNTALIR 335 LG + Q+L T L+R Sbjct: 493 ANLGISKFQDLIGRTDLLR 511 >gi|311067133|ref|YP_003972056.1| putative flavoenzyme [Bacillus atrophaeus 1942] gi|310867650|gb|ADP31125.1| putative flavoenzyme [Bacillus atrophaeus 1942] Length = 524 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 17/161 (10%) Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLLKEVGCGLSS 197 V V ++ P + I PN F+++ I L P+ +K V + Sbjct: 280 VKVTEEVADIRNVEPGKSIDSPNRFHEFSNVPEMLDFIEKLREVGKKPVGMKIVVG--NP 337 Query: 198 MDIELGLKS------GIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 +IE + + + G GGT S E + I P +L Sbjct: 338 DEIEELVSYMKKTGKHPDFITVDGSEGGTGASFHELADTVGLPIMTAL-----PIVDTLL 392 Query: 251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + ASG L + ++ LGA +A + Sbjct: 393 RKYGMRDKLKIFASGKLLTPDKVAIALALGADFVNIARGMM 433 >gi|259501337|ref|ZP_05744239.1| GMP reductase [Lactobacillus iners DSM 13335] gi|309806765|ref|ZP_07700758.1| GMP reductase [Lactobacillus iners LactinV 03V1-b] gi|309809693|ref|ZP_07703549.1| GMP reductase [Lactobacillus iners SPIN 2503V10-D] gi|312872889|ref|ZP_07732951.1| GMP reductase [Lactobacillus iners LEAF 2062A-h1] gi|312873753|ref|ZP_07733798.1| GMP reductase [Lactobacillus iners LEAF 2052A-d] gi|312875191|ref|ZP_07735204.1| GMP reductase [Lactobacillus iners LEAF 2053A-b] gi|259167307|gb|EEW51802.1| GMP reductase [Lactobacillus iners DSM 13335] gi|308166852|gb|EFO69038.1| GMP reductase [Lactobacillus iners LactinV 03V1-b] gi|308170053|gb|EFO72090.1| GMP reductase [Lactobacillus iners SPIN 2503V10-D] gi|311089298|gb|EFQ47729.1| GMP reductase [Lactobacillus iners LEAF 2053A-b] gi|311090751|gb|EFQ49150.1| GMP reductase [Lactobacillus iners LEAF 2052A-d] gi|311091623|gb|EFQ50005.1| GMP reductase [Lactobacillus iners LEAF 2062A-h1] Length = 324 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 38/271 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D S++F + P++ M IN LA+ Sbjct: 6 YDDIQLVPNKCIIKSRKEADTSIKFGKRTFKLPVV-------PANMESVINEPLAVW--- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + F + L +++ + ++ A L Sbjct: 56 --LAENDYYYVMHRFQPEKRADF--IKMMHDKGLFASISVGIKDEEYKFID-QLANEKLV 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++++ + I + + L G + + Sbjct: 111 PEYITIDV--------AHGHSDY--VIKMIKYIKEKLPESFLT--AGNIATPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + +L M + IA G Sbjct: 159 AGADATKVGIGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G+R+ DI KS+ GAS+ + S F Sbjct: 208 GIRHNGDIAKSVRFGASMVMIGSLFAGHLES 238 >gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2] gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2] Length = 481 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 26/183 (14%) Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 G +++ GV + +A ++ A L L+ Q + + + +D Sbjct: 214 GRLRVGAAIGVNQLDRARALVEAGVDVLVLDSAHGHSQ--------GIIDTLKAIKDELD 265 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 + ++ V + E +K+G + G+ + + G+ Sbjct: 266 IDVVAGNVA---TPEATEDLIKAGADAVKVGIGPGSICTT------------RIVAGVGV 310 Query: 244 PTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P +++ E IA GG++ D+ K++ +GAS + L +S V Sbjct: 311 PQITAIDTCAQVAKEYGVPIIADGGIKYSGDVAKALAVGASSV-MIGSLLAGTEESPGEV 369 Query: 302 VAA 304 V Sbjct: 370 VMY 372 >gi|40062686|gb|AAR37599.1| glutamate synthase, large subunit [uncultured marine bacterium 314] Length = 1498 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT S S + + + Sbjct: 1012 KARVGVKLVASTGVGTIAAGVAKAKADVILISGHSGGTGASPQTSIKHVGIP-----WEM 1066 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------- 291 G+ + ++ GG++ G DI+ + ++GA G+ + L Sbjct: 1067 GLTEANQILTLNGLRHQITLRTDGGIKTGRDIVMAAMMGAEEFGIGTTSLVAMGCIMVRQ 1126 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K + + VV + +E + LG K + E+ T L Sbjct: 1127 CHSNTCPVGVCTQDENLRKKFTGTPEKVVNLFTFIAQEVREILAELGFKNLNEIIGRTDL 1186 Query: 334 IRH 336 +R Sbjct: 1187 LRQ 1189 >gi|257460824|ref|ZP_05625925.1| inosine-5'-monophosphate dehydrogenase [Campylobacter gracilis RM3268] gi|257442155|gb|EEV17297.1| inosine-5'-monophosphate dehydrogenase [Campylobacter gracilis RM3268] Length = 483 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 87/262 (33%), Gaps = 34/262 (12%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH 102 E D + K PL I++ G E+I RN EK + A G Sbjct: 141 ETDTAALVGEKMTKAPL-ITAPKGCTLDDAEKIFRN--NKVEKLPIIDANG----HLEGL 193 Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 IK + R P G +++ GV +A ++ A + ++ Sbjct: 194 ITIKDLKKRIEYPSANK-DKFGRLRVAAAIGVGHLQRAEALVKAG--------VDALVMD 244 Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWS 222 + + + + + L DV +++ V + I+ +G + G+ + Sbjct: 245 SAHGHSKGIIDTLKELKRNFDVDVVVGNVA---NPASIKDIANAGADAIKVGIGPGSICT 301 Query: 223 RIESHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + G+P T ++ IA GG++ DI K++ G Sbjct: 302 T------------RIVAGVGVPQFTAINDCAIEAAKFGIPIIADGGIKYSGDIAKALAAG 349 Query: 281 ASLGGLASPFLKPAMDSSDAVV 302 AS + L ++ ++ Sbjct: 350 ASSV-MMGSLLAGCYETPGELI 370 >gi|225683016|gb|EEH21300.1| glutamate synthase [Paracoccidioides brasiliensis Pb03] Length = 2048 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 961 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1020 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1021 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1075 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1076 LRTGRDVAMACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPVLRQKFQGTP 1135 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1136 EHVINFFYYIANELRAIMAKLGIRTINEMVGRADLLK 1172 >gi|170718913|ref|YP_001784083.1| inosine 5'-monophosphate dehydrogenase [Haemophilus somnus 2336] gi|168827042|gb|ACA32413.1| inosine-5'-monophosphate dehydrogenase [Haemophilus somnus 2336] Length = 487 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 75/296 (25%), Gaps = 87/296 (29%) Query: 97 VMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 + D+ +S + + + +GA N + V VL D H Sbjct: 196 ITLKDYQKAESKPNACKDEFGRLRVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGH-- 253 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + ++ + ++P++ G ++ +G + Sbjct: 254 -------------SEGVLQRVRETRAKYPNLPIIA---GNIATAEGAIALADAGASAVKV 297 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGV 271 G+ + + G+P ++ A E IA GG+R Sbjct: 298 GIGPGSICTT------------RIVTGVGVPQITAIADAAEALRERGIPVIADGGIRYSG 345 Query: 272 DILKSIILGASLGGLASPFL---------------------------------------- 291 DI K+I GAS + S F Sbjct: 346 DIAKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMSKGSSDRYFQS 405 Query: 292 -----KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + I M L G ++EL +R Sbjct: 406 DNAADKLVPEGIEGRIPYKGFLKEIIHQQMGGLRSCMGLTGCATIEELRTKAQFVR 461 >gi|189192246|ref|XP_001932462.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974068|gb|EDU41567.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 347 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 74/239 (30%), Gaps = 35/239 (14%) Query: 57 FPLLISS-MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 PL+I++ M G +I + + M + + + + P Sbjct: 13 TPLIINAPMAG---FAGGKIA---SAVTLSGGLGMIGSAFSMTEVRKELSIAASVFNNNP 66 Query: 116 HTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 +SN +G L + + A + ++L + P ++A Sbjct: 67 -VPTLSNTLPIGLGFLPFVLNMSDALPVIEEFKPAVVWLFV--------PKSLDDYAKWV 117 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 I +S + + L V + I ++ D G G + + S L Sbjct: 118 PAIREVSPESKIWIQLGSVAAAVYVARIARPDVLCLQGADAGGHG---FEKGASIISLLP 174 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G +ASGG+ +G + ++ LGA + + FL Sbjct: 175 EASDALAAEGFS-------------HIPLVASGGVVDGRGVAAALTLGAQGVVMGTRFL 220 >gi|32266201|ref|NP_860233.1| inosine 5'-monophosphate dehydrogenase [Helicobacter hepaticus ATCC 51449] gi|32262251|gb|AAP77299.1| Inosinic acid dehydrogenase GuaB [Helicobacter hepaticus ATCC 51449] Length = 481 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 68/182 (37%), Gaps = 26/182 (14%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 G +++ GV++ +A + A L L+ + + ++ + + S + Sbjct: 213 FGRLKVGAAIGVKQFERAQALADAGADVLVLDSA--------HGHSINVLKTLEKIKSKL 264 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + ++ VG ++ + + +G + G+ + + G Sbjct: 265 TIDIV---VGNVVTPQATQDLINAGADAVKVGIGPGSICTT------------RIVAGVG 309 Query: 243 IPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 +P +++ ++ IA GG++ DI K++ +GAS + L +S Sbjct: 310 MPQISAIDDCSQIAQKHKIPIIADGGIKYSGDIAKALAVGASSV-MIGSLLAGTEESPGD 368 Query: 301 VV 302 ++ Sbjct: 369 LI 370 >gi|27467937|ref|NP_764574.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis ATCC 12228] gi|57866827|ref|YP_188485.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis RP62A] gi|251810770|ref|ZP_04825243.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis BCM-HMP0060] gi|282876230|ref|ZP_06285097.1| GMP reductase [Staphylococcus epidermidis SK135] gi|293366698|ref|ZP_06613374.1| GMP reductase [Staphylococcus epidermidis M23864:W2(grey)] gi|45476920|sp|Q8CPC9|GUAC_STAES RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|62286704|sp|Q5HPK5|GUAC_STAEQ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|27315482|gb|AAO04616.1|AE016747_113 GMP reductase [Staphylococcus epidermidis ATCC 12228] gi|57637485|gb|AAW54273.1| guanosine monophosphate reductase [Staphylococcus epidermidis RP62A] gi|251805698|gb|EES58355.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis BCM-HMP0060] gi|281295255|gb|EFA87782.1| GMP reductase [Staphylococcus epidermidis SK135] gi|291318999|gb|EFE59369.1| GMP reductase [Staphylococcus epidermidis M23864:W2(grey)] gi|329725087|gb|EGG61581.1| GMP reductase [Staphylococcus epidermidis VCU144] gi|329735874|gb|EGG72153.1| GMP reductase [Staphylococcus epidermidis VCU028] gi|329736659|gb|EGG72925.1| GMP reductase [Staphylococcus epidermidis VCU045] Length = 325 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 84/280 (30%), Gaps = 44/280 (15%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E + SV+F + P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECNTSVKFGPRTFKLPVV-------PANMQTVMNEELAQWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + + F + H L +++ +F + Sbjct: 58 ENDYF------YIMHRFNEENRIPF--IKKMHHAGLFASISVGVKENEFNF------IEK 103 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + L E I + ++ + + I + + ++ G + + Sbjct: 104 LASSSLIP------EYITIDIAHGHSNSVINMIKHIKKHLPNSFVI--AGNVGTPEGVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W LS I Sbjct: 156 LENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLSALNLCNKAARKPII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GGLR DI KSI GA++ + S F + V Sbjct: 205 ADGGLRTHGDIAKSIRFGATMVMIGSLFAAHEESPGETVE 244 >gi|326793734|ref|YP_004311554.1| glutamate synthase (ferredoxin) [Marinomonas mediterranea MMB-1] gi|326544498|gb|ADZ89718.1| Glutamate synthase (ferredoxin) [Marinomonas mediterranea MMB-1] Length = 1483 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + G+ Sbjct: 997 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRHAGSP-----WELGLA 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLK---- 292 A + + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1052 EAQQALRANDLRGKIRLQTDGGLKTGLDVVKAAILGAESFGFGTTPMVAMGCKFLRICHL 1111 Query: 293 -----------------PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + + ++ M LG ++Q+L T L+ Sbjct: 1112 NNCATGVATQDKHLRDEHFIGTVEMIKNFFRFMAEDTRQWMAKLGVSKLQDLIGRTDLL 1170 >gi|296395060|ref|YP_003659944.1| glutamate synthase [Segniliparus rotundus DSM 44985] gi|296182207|gb|ADG99113.1| Glutamate synthase (ferredoxin) [Segniliparus rotundus DSM 44985] Length = 1823 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1117 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1176 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + G+ A + SG + Sbjct: 1177 VAGNTGGTGAAAVTSLKYAGRS-----AEIGVAEVHQALCASGIRQKVLLRCSGAHQTAS 1231 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 D++KS +LGA + L + A+ + ++ Sbjct: 1232 DVVKSALLGADSFEFGTTALMMLKCVMAKNCNIKCPAGLTTNAEAFEGDPRALAQYLLNI 1291 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + ++E + L+ Sbjct: 1292 AHEVREILATLGLRSLREARGRSDLLH 1318 >gi|229171312|ref|ZP_04298900.1| Glutamate synthase, large subunit [Bacillus cereus MM3] gi|228612158|gb|EEK69392.1| Glutamate synthase, large subunit [Bacillus cereus MM3] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRQKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|228907097|ref|ZP_04070961.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis IBL 200] gi|228852601|gb|EEM97391.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis IBL 200] Length = 363 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 54/263 (20%) Query: 53 KKLSFPLLISSMTG--GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFEL 110 K+ +P++ + M G + +++ A + + M AI + + Sbjct: 11 LKIEYPVVQAGMAGAITSPELV-------AAVSNSGGLGMLGAGYMSPEQIREAI--YRI 61 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-IQPNGNTNFA 169 R+ V L +Q + V+ A L +N +E+ I+ G Sbjct: 62 RELTDKPF------GVNLLVTKEIQIEEEKVN--EAKVLLSGVN--RELGIEVEGTLKLP 111 Query: 170 DLSSKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIELGLKSGIRY 210 + + VP++ +K +G + ++ + G+ Sbjct: 112 KSYKEQLQVLLDEKVPVVSFAFQTLEKEEINDLKRSGIKVIGTATHVKEAKVLAELGVDI 171 Query: 211 FDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 G GG + I RD I T + + +A+GG+ Sbjct: 172 IVGQGSEAGGHRGTFIGKERDAM-----------IGTFALIPQLVGAVPDIPIVAAGGVM 220 Query: 269 NGVDILKSIILGASLGGLASPFL 291 NG ++ ++ LGA + S FL Sbjct: 221 NGQGLVAALALGAEGVQMGSAFL 243 >gi|148651920|ref|YP_001279013.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein [Psychrobacter sp. PRwf-1] gi|148571004|gb|ABQ93063.1| L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein [Psychrobacter sp. PRwf-1] Length = 71 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 277 IILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + +GA + P L + + V + +E L ++ +M L G ++ +L Sbjct: 1 MAMGADAVAVGRPVLYGLGLGGAQGVQSVLEFLEQDLKTAMLLSGAAKLSDL 52 >gi|268318607|ref|YP_003292263.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus johnsonii FI9785] gi|262396982|emb|CAX65996.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus johnsonii FI9785] Length = 384 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 90/290 (31%), Gaps = 49/290 (16%) Query: 14 CKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNN 69 + + FDD LI LP +EV + +L PL+ + M Sbjct: 3 LWETKFAKKGLTFDDVLLIPAESHVLP----NEVKLDTKLASNLQLHIPLISAGM----- 53 Query: 70 KMIERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 + + A + V S + K + PH + N G Sbjct: 54 ---DTVTEGNMAIAMAENGGLGVIHKNLSIEAQVEEVKKAKGKTVDPNLPH-PAVDNQGR 109 Query: 126 VQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM- 182 + GV +A +L A + ++ + + A + KI + Sbjct: 110 LLAAAAVGVTSDTFERAESLLEAGADAIVIDTA--------HGHSAGVLRKIKEIREHFP 161 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + L+ V G +G+ + G+ + + G Sbjct: 162 NATLIAGNVATG---EGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVG 206 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P ++ A + + IA GG++ D++K++ G + L S F Sbjct: 207 VPQITAIYDAASVAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 256 >gi|228983730|ref|ZP_04143928.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775999|gb|EEM24367.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|229154236|ref|ZP_04282357.1| Glutamate synthase, large subunit [Bacillus cereus ATCC 4342] gi|228629250|gb|EEK85956.1| Glutamate synthase, large subunit [Bacillus cereus ATCC 4342] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|208434765|ref|YP_002266431.1| guanosine 5'-monophosphate oxido reductase [Helicobacter pylori G27] gi|226739788|sp|B5Z7L6|GUAC_HELPG RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|208432694|gb|ACI27565.1| guanosine 5'-monophosphate oxido reductase [Helicobacter pylori G27] Length = 325 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 88/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M INR++A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINRSIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + +LI L L D+ Sbjct: 59 NGYFYIMHRFNGSARIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ---------------RIKTHLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|116494419|ref|YP_806153.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus casei ATCC 334] gi|239631165|ref|ZP_04674196.1| GMP reductase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065927|ref|YP_003787950.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei str. Zhang] gi|122264155|sp|Q03AR1|GUAC_LACC3 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|116104569|gb|ABJ69711.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei ATCC 334] gi|239525630|gb|EEQ64631.1| GMP reductase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438334|gb|ADK18100.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei str. Zhang] Length = 329 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 84/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 10 YEDIQMIPNKCVVQSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 63 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDDEFDFIEALAANE-L 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + ++ Q + I + + ++ G + + Sbjct: 114 TPDY--ITIDIAHGYAQV--------VIDMIQHIKHYLPNAFVI--AGNVGTPEAVRELE 161 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 162 NAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 210 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 211 GGIRNNGDIAKSIRFGATMCMIGSLF 236 >gi|225862509|ref|YP_002747887.1| putative glutamate synthase, large subunit [Bacillus cereus 03BB102] gi|225789675|gb|ACO29892.1| putative glutamate synthase, large subunit [Bacillus cereus 03BB102] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|221133479|ref|ZP_03559784.1| glutamate synthase subunit alpha [Glaciecola sp. HTCC2999] Length = 1488 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 997 ISVKLVSEPGVGTIACGVAKAYADLITISGYDGGTAASPLTSVKYAGSPFELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 + ++ + GGL+ G+D++K+ ILGA + L FL+ Sbjct: 1053 -AQQALIENGLRHKVRVQTDGGLKTGLDVVKAGILGAESFGFGTGPMVALGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A D V + + +E M L+G ++ ++L T L+ Sbjct: 1112 NNCATGVATQDEKLRENYFIGLPDMVENYFKFIAQEIRELMALMGVRKFEDLVGRTELLN 1171 >gi|304311841|ref|YP_003811439.1| Inosine-5\'-monophophate dehydrogenase [gamma proteobacterium HdN1] gi|301797574|emb|CBL45794.1| Inosine-5\'-monophophate dehydrogenase [gamma proteobacterium HdN1] Length = 489 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 34/217 (15%) Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 R M ++ + K+ + +GA + G + A+ GAD L + Sbjct: 192 RGMVTNTDIRKAEAYPNACKDALGRLRVGAA-VGTGAGNEDRVDALVDAGADVLIV---- 246 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + + + ++ + ++ ++ + G G + Sbjct: 247 ------DTAHGHSRGVIERVGWIKKNYPNIQVIGGNIATG---DAARALADVGADAVKVG 297 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVD 272 G+ + + G+P T +S A IA GG+R D Sbjct: 298 IGPGSICTT------------RIVAGIGVPQITAVSDVAAALEGTGVGIIADGGIRFSGD 345 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 I K+I GA + + ++ +E + Sbjct: 346 IAKAIAAGAHCV-----MVGSMLAGTEEAPGEVELFQ 377 >gi|253989306|ref|YP_003040662.1| inosine 5'-monophosphate dehydrogenase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780756|emb|CAQ83918.1| inosine-5'-monophosphate dehydrogenase [Photorhabdus asymbiotica] Length = 517 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 61/222 (27%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + ++ ++ V G + + +G+ + G+ + Sbjct: 285 GVLQRIRETRAKYPNLQIIGGNVATG---EGAKALVDAGVNAVKVGIGPGSICTT----- 336 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R DI K+I GAS + Sbjct: 337 -------RIVTGVGVPQITAISDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-M 388 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 389 VGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEG 448 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++++ + M L G + EL +R Sbjct: 449 RVAYKGLLKNIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVR 490 >gi|229164407|ref|ZP_04292336.1| GMP reductase [Bacillus cereus R309803] gi|228619057|gb|EEK75954.1| GMP reductase [Bacillus cereus R309803] Length = 328 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 88/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAEQLTPE 114 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + + ++ G + + Sbjct: 115 YITIDIAHGHSNA---------------VINMIQHIKKHLPESFVI--AGNVGTPEAVRE 157 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 158 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 206 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 ADGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKEGKLYKE 254 >gi|172057691|ref|YP_001814151.1| guanosine 5'-monophosphate oxidoreductase [Exiguobacterium sibiricum 255-15] gi|226739787|sp|B1YH73|GUAC_EXIS2 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|171990212|gb|ACB61134.1| guanosine monophosphate reductase [Exiguobacterium sibiricum 255-15] Length = 328 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 96/285 (33%), Gaps = 42/285 (14%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI +++ S E D +VEF G++ P++ M I+ +A Sbjct: 8 YEDIQLIPAKSIVG-SRSECDTTVEFGGRRFKLPVV-------PANMQTIIDEKIATFLA 59 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + + +F +R+ LI+++ ++ + A L Sbjct: 60 ENG-----YFYIMHRFEPETRLNF-VREMQQRG-LIASISVGVKTEEYTFIETL-AQEGL 111 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + ++ G + + Sbjct: 112 TPEYITIDI----------AHGHSEAVIRMIQHIKQILPESFVI--AGNVGTPEAVRELE 159 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L ++ IA Sbjct: 160 HAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIAD 208 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 GG+R DI KS+ GA++ + S F + S + ++ L+ Sbjct: 209 GGIRTHGDIAKSVRFGATMVMIGSLF--AGHEESPGEMQEVDGLQ 251 >gi|171058744|ref|YP_001791093.1| inosine-5'-monophosphate dehydrogenase [Leptothrix cholodnii SP-6] gi|170776189|gb|ACB34328.1| inosine-5'-monophosphate dehydrogenase [Leptothrix cholodnii SP-6] Length = 489 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 47/227 (20%) Query: 108 FELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ---PN 163 FE R AP ++ V + + +A +H + + + LN E+ Sbjct: 139 FETRLDAPVREIMTPRERLVTVREGATLAEAKALMHQHKLERVLV-LNEASELRGLFTVK 197 Query: 164 GNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR 223 T + + + V + VG G + +EL ++G+ + G S Sbjct: 198 DITKQTTFPNAARDAAGKLRVGAAV-GVGEG-TEERVELLARAGVDAIVVDTAHGHSAGV 255 Query: 224 IESHRDLESDIGIV--------------------------------------FQDWGIPT 245 IE R ++ + + G+P Sbjct: 256 IERVRWVKRNYPQIDVIGGNIATGAAALALAEAGADGVKVGIGPGSICTTRIVAGVGVPQ 315 Query: 246 PLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +++ IA GG+R DI K+I GA+ + F Sbjct: 316 ITAIDNVATALQGTGVPLIADGGVRYSGDIAKAIAAGANTVMMGGMF 362 >gi|330983374|gb|EGH81477.1| glutamate synthase family protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 158 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + Q I SGG+RNG D+ K++ LGA + + L D+ + ++ + Sbjct: 7 KVQLIVSGGIRNGADVAKAMALGADAVAIGTAALIALGDNHPRLDEELKKI 57 >gi|315039201|ref|YP_004032769.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus amylovorus GRL 1112] gi|312277334|gb|ADQ59974.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus amylovorus GRL 1112] Length = 330 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD LI S + D SV+F + P++ M IN +LA+ + Sbjct: 12 YDDIQLIPNKGIIKSRRDADTSVKFGSRTFKIPVV-------PANMESVINDDLAVWLAE 64 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 + + F ++ + S +G YDF + Q L Sbjct: 65 NG-----YYYVMHRFEPEKRIPF-IKMMHEKGLFASISVGIKDSEYDFIDELVKQ---NL 115 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + L G + + Sbjct: 116 KPEYITIDV----------AHGHSVYVIKMIKYIKEKLPDSFLT--AGNIATPEAVRELE 163 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + +L M ++ IA Sbjct: 164 NAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKVASK-PLIAD 212 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R+ DI KS+ GA++ + L +S V+ Sbjct: 213 GGIRHNGDIAKSVRFGATMV-MIGSMLAGHQESPGNVIK 250 >gi|293392142|ref|ZP_06636476.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952676|gb|EFE02795.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 488 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++P++ G ++ +G + G+ + Sbjct: 257 GVLQRVRETRAKYPNLPIIA---GNIATAEGAIALADAGASAVKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K+I GAS + Sbjct: 309 -------RIVTGVGVPQITAISDAAEALKDRSIPVIADGGIRYSGDIAKAIAAGASCVMV 361 Query: 287 ASPFL---------------------------------------------KPAMDSSDA- 300 S F K + + Sbjct: 362 GSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMAKGSSDRYFQSDNAADKLVPEGIEGR 421 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I M L G + EL +R Sbjct: 422 IPYKGLLKEIIHQQMGGLRSCMGLTGCATIDELRTKAQFVR 462 >gi|229182853|ref|ZP_04310089.1| Glutamate synthase, large subunit [Bacillus cereus BGSC 6E1] gi|228600620|gb|EEK58204.1| Glutamate synthase, large subunit [Bacillus cereus BGSC 6E1] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|323357247|ref|YP_004223643.1| IMP dehydrogenase/GMP reductase [Microbacterium testaceum StLB037] gi|323273618|dbj|BAJ73763.1| IMP dehydrogenase/GMP reductase [Microbacterium testaceum StLB037] Length = 373 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 60/202 (29%), Gaps = 53/202 (26%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S + L + Sbjct: 179 NLKKFIYDLDVPVI---VGGAATYTAALHLMRTGAAGVLV-GFGGGAASTTRATLGLHAP 234 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLG--G 285 + D + AR + IA GG+ DI+K++ +GA G Sbjct: 235 MATAVAD--------VAGARRDYLDESGGRYVHVIADGGVGTSGDIVKALAMGADAVMLG 286 Query: 286 LASP---------------------------------FLKPAMDSSDAVVAAIESLRKEF 312 +A L+ + V +L Sbjct: 287 VALARATDAPGRGFHWGPEAHHAKLPRGRRVAVDRVGPLEQVLYGPAPVADGTANLIGAL 346 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM G ++E ++ Sbjct: 347 KKSMATTGYSDLKEFQRVEVVV 368 >gi|294500373|ref|YP_003564073.1| 2-nitropropane dioxygenase [Bacillus megaterium QM B1551] gi|294350310|gb|ADE70639.1| 2-nitropropane dioxygenase [Bacillus megaterium QM B1551] Length = 361 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 90/264 (34%), Gaps = 40/264 (15%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQ 112 + P++ + M G ++ I E + +G+ + D E+R+ Sbjct: 11 LDIKAPIIQAGMAGDKITTVDLI----VNVCEAGGLG-TLGAAYMHPEDIRQA-VREIRK 64 Query: 113 YAPHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN-FAD 170 Y + NL A ++ + G +++ Q + + + QE+ N F Sbjct: 65 YTKRPFAV-NLFATEMADNTGGLEEVQQLLDTMRGVLSIKRVE--QEVKTKNLFKEQFKV 121 Query: 171 LSSKIALLSSAMDVPL------LLKE--VGCGLSSMDIELGLKSGIRYFDI--------A 214 L + + S L + KE + ++ L + + D+ Sbjct: 122 LVEEQVPIVSTAFGVLPPYAMKIAKENDIKVMTMVTTVKEALTAQEQGTDVIIAQGSEAG 181 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 G GT + E + G+ SL + IA+GG+ +G ++ Sbjct: 182 GHRGT-FDVNEH---------PYGANIGL---FSLVSQIVDQVDVPVIATGGIMDGRGLI 228 Query: 275 KSIILGASLGGLASPFLKPAMDSS 298 ++ LGAS + + FL + Sbjct: 229 AALALGASGVQMGTAFLATQESGA 252 >gi|81428090|ref|YP_395089.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus sakei subsp. sakei 23K] gi|123564612|sp|Q38YF0|GUAC_LACSS RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|78609731|emb|CAI54777.1| Guanosine 5'-monophosphate reductase (GMP reductase) [Lactobacillus sakei subsp. sakei 23K] Length = 325 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 40/286 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E+D +V F + P++ M I+ LAI AE Sbjct: 6 YEDVQLIPNKCIVKSRSEIDTTVRFGSETFKIPVV-------PANMQTIIDEPLAIWLAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +F + L +++ + +F A L Sbjct: 59 NHYF------YVMHRFQPEKRPAF--IKMMHERNLFASISVGVKDDEFDFIN-QLAQDNL 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + ++ G + + Sbjct: 110 IPEYITIDI----------AHGHSQVVIDMIQHIKKVLPKSFVI--AGNVGTPEAVRDLE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 ++G + G +++ G G +L + IA Sbjct: 158 RAGADATKVGIGPGKVCIT-----KIKTGFGTGGWQLG-----ALRWCAKAATK-PIIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GA++ + S F + V + ++ Sbjct: 207 GGIRTNGDIAKSIRFGANMVMIGSLFAGHTESPGELVEEDGQQFKE 252 >gi|254557722|ref|YP_003064139.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus plantarum JDM1] gi|300769518|ref|ZP_07079404.1| inosine-5-monophosphate dehydrogenase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181808|ref|YP_003925936.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III] gi|254046649|gb|ACT63442.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus plantarum JDM1] gi|300492933|gb|EFK28115.1| inosine-5-monophosphate dehydrogenase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047299|gb|ADN99842.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 383 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 95/289 (32%), Gaps = 45/289 (15%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +EV+ V+ +L+ P++ + M + + Sbjct: 15 FDDVLLIPAESHVLP----NEVNLGVKLADNLQLNIPIISAGMDTVSESAMGI------A 64 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLISN---LGAVQLNYDFGVQK 136 A + +A+ + + K + PH + +N L + Sbjct: 65 MANQGGLAVIHKNLSIEAQAEEVKKIKAVVKDDDHPHAAVDANNHLLAVAAVGVTSDTFD 124 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 +A+ GAD + + + + A + KI + + L+ G + Sbjct: 125 RAEALFAAGADAIVI----------DTAHGHSAGVLRKIKEIRAHFPKQTLI--AGNVAT 172 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + ++G+ + G+ + + G+P ++ + Sbjct: 173 AEGTRALFEAGVDVVKVGIGPGSICTT------------RIVAGVGVPQLTAVYDSASVA 220 Query: 257 NEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 E IA GG++ DI+K++ G + L S A + V Sbjct: 221 REYGKAIIADGGIKYSGDIVKALAAGGNAVMLGSMLAGTAEAPGEVVFD 269 >gi|163795994|ref|ZP_02189957.1| oxidoreductase, 2-nitropropane dioxygenase family protein [alpha proteobacterium BAL199] gi|159178749|gb|EDP63287.1| oxidoreductase, 2-nitropropane dioxygenase family protein [alpha proteobacterium BAL199] Length = 360 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 85/250 (34%), Gaps = 32/250 (12%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 L P++ + M GG + A+ A ++ S I+S + + Sbjct: 13 LDHPIIQAPMAGGGDTP--------ALVAAVSQAGGMGFFGGAYLSPDQIIESGRAIRSS 64 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL---NPLQEIIQPNGNTNFADL 171 + NL A Q + H+AV + L L +P P + A L Sbjct: 65 TNRRFGVNLFAPQPVSE-PPTAPHRAVDRVAPFFAELGLETPSPPVLAADPFEDRLAAAL 123 Query: 172 SSKIALLSSAMDV-------PLLLKEVGCGLSSMDIELGLKSGIRYFD-IAGRGGTSWSR 223 S ++ S + + + K + ++ ++ + D I +GG Sbjct: 124 ESGVSAFSFTLGLLPDFAVQAIKAKGMTLIGTATTVDEAVALERSGVDAIVAQGG----- 178 Query: 224 IESHRDLESDIGIVFQDW--GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGA 281 + G D G+ ++L IASGG+ +G I +++LGA Sbjct: 179 -----EAGGHRGTFLGDLNAGVVGTMALVPQVLDAVSIPVIASGGIMDGRGIAAALVLGA 233 Query: 282 SLGGLASPFL 291 + + FL Sbjct: 234 DAVQMGTAFL 243 >gi|126727259|ref|ZP_01743095.1| Glutamate synthase (ferredoxin) [Rhodobacterales bacterium HTCC2150] gi|126703468|gb|EBA02565.1| Glutamate synthase (ferredoxin) [Rhodobacterales bacterium HTCC2150] Length = 1510 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVAASGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTETHQVLAMNNLRDRITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 S+D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEELRDKFTGSADKVVNLITFYAEEVREVLASIGARSIDE 1189 >gi|119477145|ref|ZP_01617381.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2143] gi|119449508|gb|EAW30746.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2143] Length = 498 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 88/286 (30%), Gaps = 58/286 (20%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV----------------- 88 + F IS+M+ G R L++ A++ + Sbjct: 147 TTTSFFN--------ISAMSYGALSGPAV--RALSLGAKQAGIWLNTGEGGISPFHLEGG 196 Query: 89 ---AMAVGSQRVMFSDHNAIK-SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +G+ + D +LR A H + + G V Sbjct: 197 CDIVFQMGTAKYGVRDEQGKLCDQKLRAIASHEQVRMIEIKLSQGAKPGKGGILPGGKVT 256 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFA---DLSSKIALLSSAMDVPLLLKEVGCGLSS-MDI 200 + + ++ I PN + + DL + I + P+ +K V + +I Sbjct: 257 EIIAMTRGIPVGEDSISPNRHKDIGSIDDLLNMIHRVREVTGKPVGIKAVIGAVEWLEEI 316 Query: 201 ELG-----LKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA-- 252 L L+ + + + GGT + +S + + G+P +SL M Sbjct: 317 CLAINTRGLQYAPDFITVDSADGGTGAA-------PQSLMDYM----GLPVKISLPMVVN 365 Query: 253 ----RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + I SG + N + ++ LGA A F+ Sbjct: 366 KLIEHGLRQRIRIICSGKMINPAGVAGALCLGADCVNSARGFMFAL 411 >gi|118476214|ref|YP_893365.1| glutamate synthase (NADPH) large subunit / glutamate synthase (ferredoxin) [Bacillus thuringiensis str. Al Hakam] gi|118415439|gb|ABK83858.1| glutamate synthase (NADPH) large subunit / glutamate synthase (ferredoxin) [Bacillus thuringiensis str. Al Hakam] Length = 1478 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|326801547|ref|YP_004319366.1| 2-nitropropane dioxygenase [Sphingobacterium sp. 21] gi|326552311|gb|ADZ80696.1| 2-nitropropane dioxygenase [Sphingobacterium sp. 21] Length = 377 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 14/108 (12%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGI 243 L +K VG + + +G+ G GG S ++S D + Sbjct: 171 LGIKTVGAATTVDEAIALQHAGVDAIVATGFEAGGHRVSFLQSAEDS------------L 218 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 +L IA+GG+ + I ++ LGA + + FL Sbjct: 219 TGAFALIPQVADAVNIPIIAAGGITDARGIQAALALGADAVQMGTAFL 266 >gi|322371549|ref|ZP_08046095.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus paucihalophilus DX253] gi|320548840|gb|EFW90508.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus paucihalophilus DX253] Length = 346 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 79/264 (29%), Gaps = 45/264 (17%) Query: 31 LIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAA-EKTKV 88 L+ + P S +V + + +L PLL + M + + A A + Sbjct: 3 LVPQRSPVDSRSDVSLTTKLTPTLELDAPLLSAPM--------DTVTETDAAIALSELG- 53 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADG 148 +G+ + ++R G V + + L A G Sbjct: 54 --GLGTIHRFMGIEEQAE--QVRSVKAAG------GLVGAAVGINEEFIGRTEATLDAGG 103 Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + ++ ++ ++ + + L+ G ++ + +G Sbjct: 104 DCIMVDVAHGHME--------RCLDAVSEIKAEFPDAELV--AGNVVTPEAVSDLYSAGA 153 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGG 266 + G+ + G+P +++ R +A GG Sbjct: 154 DGVKVGVGPGSHCTT------------RKVAGTGVPQLTAVDDCSDRADELGIPIVADGG 201 Query: 267 LRNGVDILKSIILGASLGGLASPF 290 +R D K+++ GA + S F Sbjct: 202 IRTSGDAAKALMAGADTVMMGSFF 225 >gi|229089590|ref|ZP_04220856.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-42] gi|228693741|gb|EEL47438.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-42] Length = 1478 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|329894546|ref|ZP_08270354.1| Glutamate synthase [NADPH] large chain [gamma proteobacterium IMCC3088] gi|328922984|gb|EGG30310.1| Glutamate synthase [NADPH] large chain [gamma proteobacterium IMCC3088] Length = 1483 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S I S R S + G+ Sbjct: 998 VSVKLVSEPGIGTIAAGVAKAYADLITISGYDGGTAASPITSIRHAGSP-----WELGLA 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A GG++ G+D++K+ ILGA G +P + Sbjct: 1053 EVQQTLRGNRLRGSIRLQADGGMKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1112 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + D VV + +E + LG + ++EL T L+ Sbjct: 1113 NNCATGVATQDSRLRDDHFNGTVDMVVNFFTMVAEETREWLAKLGVRSIEELIGRTDLLE 1172 >gi|251792304|ref|YP_003007029.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus NJ8700] gi|247533696|gb|ACS96942.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus NJ8700] Length = 488 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++P++ V ++ +G + G+ + Sbjct: 257 GVLQRVRETRAKYPNLPIIAGNVA---TAEGAIALADAGASAVKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K+I GAS + Sbjct: 309 -------RIVTGVGVPQITAISDAAEALKDRGIPVIADGGIRYSGDIAKAIAAGASCVMV 361 Query: 287 ASPFL---------------------------------------------KPAMDSSDA- 300 S F K + + Sbjct: 362 GSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMAKGSSDRYFQSDNAADKLVPEGIEGR 421 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I M L G + EL +R Sbjct: 422 IPYKGLLKEIIHQQMGGLRSCMGLTGCATIDELRTKAQFVR 462 >gi|228931957|ref|ZP_04094851.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827742|gb|EEM73482.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1478 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|206974366|ref|ZP_03235283.1| putative glutamate synthase, large subunit [Bacillus cereus H3081.97] gi|206747606|gb|EDZ58996.1| putative glutamate synthase, large subunit [Bacillus cereus H3081.97] Length = 1478 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------V 88 ++ +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 826 VAAEEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEI 879 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLG 145 +G A F + ++ +G + G + + + Sbjct: 880 KDMIGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAE 939 Query: 146 ADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 940 ARNATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAV 995 Query: 203 -GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G + +I+G GGT +RI + + + + + G+ + + ++ + Sbjct: 996 GIAKAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVE 1050 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG+R+ D LK ++LGA+ G Sbjct: 1051 IWADGGIRSVNDALKIMLLGANRIGFG 1077 >gi|196040166|ref|ZP_03107468.1| putative glutamate synthase, large subunit [Bacillus cereus NVH0597-99] gi|196029021|gb|EDX67626.1| putative glutamate synthase, large subunit [Bacillus cereus NVH0597-99] Length = 1478 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|302871598|ref|YP_003840234.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor obsidiansis OB47] gi|302574457|gb|ADL42248.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor obsidiansis OB47] Length = 488 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 63/457 (13%), Positives = 123/457 (26%), Gaps = 157/457 (34%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD L+ + E+ +VD S KL+ PL+ + M T ++M I A Sbjct: 14 FDDVLLVPQ-YSEVLPKDVDVSTYLTKTIKLNIPLMSAGMDTVTESRMAIAI-------A 65 Query: 84 EKTKVA-----MAVGSQRVMF------SDHNAIKSFELRQYAP----------------- 115 + + M V Q + F L Sbjct: 66 REGGIGVIHKNMTVEEQASEVDKVKRSEHGVIVDPFYLSPENKIYEAMELMAKYRISGVP 125 Query: 116 ---HTVLISNLGAVQLNYD----FGVQKAHQAVHVLGADGLFLHLNPLQEIIQP------ 162 + L+ + + ++ ++ A +++ A + L +EI++ Sbjct: 126 ITVNGKLVGIITNRDIRFETDYSKPIKDVMTASNLITAKE-GITLEEAKEIMKKHKIEKL 184 Query: 163 ---NGNTNFADLSSKIALLSSAMDVPLLLKEVGC--------GLSSMD---IELGLKSGI 208 + + N L + I + A+ P K+ G+S ++ +K+ + Sbjct: 185 PIVDDDGNLKGLIT-IKDIEKAVKYPNAAKDSKGRLLCAAAVGVSRDTDERVDALVKAQV 243 Query: 209 RYFDIAGRGGT-----------------------SWSRIESHRDLESDIGIVF------- 238 + G + + E+ RDL Sbjct: 244 DVIVVDTAHGHSKGVIETVKKIKSRYPNIQVVAGNIATAEAARDLIEAGADCVKVGIGPG 303 Query: 239 --------QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 G+P ++ E IA GG+R DI K++ GA + + S Sbjct: 304 SICTTRVVAGIGVPQITAIMDVAKVAKEYGIPVIADGGIRYSGDITKALAAGADVVMIGS 363 Query: 289 PFL-------------------------------------------KPAMDSSDA----- 300 F K + + Sbjct: 364 LFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRYFQEDASKLVPEGVEGRVPYK 423 Query: 301 --VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L M G + ++EL ++ Sbjct: 424 GPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|254475617|ref|ZP_05089003.1| glutamate synthase domain family protein [Ruegeria sp. R11] gi|214029860|gb|EEB70695.1| glutamate synthase domain family protein [Ruegeria sp. R11] Length = 1510 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|217958067|ref|YP_002336611.1| putative glutamate synthase, large subunit [Bacillus cereus AH187] gi|229137333|ref|ZP_04265948.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST26] gi|217065067|gb|ACJ79317.1| putative glutamate synthase, large subunit [Bacillus cereus AH187] gi|228646152|gb|EEL02371.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST26] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------V 88 ++ +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 826 VAAEEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEI 879 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLG 145 +G A F + ++ +G + G + + + Sbjct: 880 KDMIGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAE 939 Query: 146 ADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 940 ARNATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAV 995 Query: 203 -GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G + +I+G GGT +RI + + + + + G+ + + ++ + Sbjct: 996 GIAKAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVE 1050 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG+R+ D LK ++LGA+ G Sbjct: 1051 IWADGGIRSVNDALKIMLLGANRIGFG 1077 >gi|2661858|emb|CAB06303.1| inosine monophosphate dehydrogenase [Prosthecochloris vibrioformis] Length = 521 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 51/196 (26%), Gaps = 68/196 (34%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--R 253 + + +K+G + G+ + V G+P ++ Sbjct: 311 TPEAVRDLVKAGADAVKVGIGPGSICTT------------RVVAGVGMPQLTAIMNCAKE 358 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------------------- 291 + IA GG++ DI K++ GA + S F Sbjct: 359 AAKTDTPIIADGGIKYSGDISKALAAGADTVMMGSIFAGTDESPGETILYEGRRFKAYRG 418 Query: 292 --------------------------KPAMDSSDA------VVAAIESLRKEFIVSMFLL 319 K + + + + L SM Sbjct: 419 MGSLGAMSEPEGSSDRYFQDASAETKKYVPEGIEGRIPQRPLDEVVYQLIGGLKSSMGYC 478 Query: 320 GTKRVQELYLNTALIR 335 G K ++EL NT +R Sbjct: 479 GVKNIEELKKNTRFVR 494 >gi|228913215|ref|ZP_04076854.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846620|gb|EEM91633.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|310816854|ref|YP_003964818.1| Glutamine-pyruvate aminotransferase [Ketogulonicigenium vulgare Y25] gi|308755589|gb|ADO43518.1| Glutamine-pyruvate aminotransferase [Ketogulonicigenium vulgare Y25] Length = 1513 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ ++G G + + + + G Sbjct: 1025 RCKVTVKLVSSSGVGTIAAGVAKAKADVILVSGHNGGTGASP----GTSIKHAGLPWEMG 1080 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1081 LTEAHQVLTMNNLRDRVTLRTDGGLRTGRDIVIAAMLGAEEYGIGTAALIAMGCIMVRQC 1140 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 S+D VV I E + +G + + E Sbjct: 1141 QSNTCPVGVCTQNPELRQKFTGSADKVVNLITFYATEVREILASIGARSLDE 1192 >gi|301052181|ref|YP_003790392.1| glutamate synthase, NADPH large subunit [Bacillus anthracis CI] gi|300374350|gb|ADK03254.1| glutamate synthase, NADPH, large subunit [Bacillus cereus biovar anthracis str. CI] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|296330728|ref|ZP_06873204.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|296152042|gb|EFG92915.1| guanosine 5'-monophosphate oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 321 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV + P++ M I+ LAI Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVRLGERTFKLPVV-------PANMQTIIDEKLAI---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 ++A + + F ++ + S +G Y+F Q A + Sbjct: 56 -QLAENGYFYVMHRFEPETRIDF-IKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPE 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ L + ++ G + + Sbjct: 114 YVTIDIAHGHSNAVIEMIQ---------------HLKKHLPDSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KSI GA++ + S F Sbjct: 206 ADGGIRTHGDIAKSIRFGATMVMIGSLF 233 >gi|289548974|ref|YP_003473962.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM 14484] gi|289182591|gb|ADC89835.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM 14484] Length = 484 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 22/136 (16%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + + ++ S +V ++ + G + D +K+G + G+ + Sbjct: 252 HSKRVLQTVEMIKSNFNVDVIAGNIATGEGAED---LIKAGADAVKVGVGPGSICTT--- 305 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLG 284 + G+P ++ + + IA GG+R DI+K++ GA Sbjct: 306 ---------RIVAGVGVPQLSAIMWVYEVASKYDVPVIADGGIRYSGDIVKALAAGADAV 356 Query: 285 GLASPFLKPAMDSSDA 300 L + ++ Sbjct: 357 -----MLGNLLAGTEE 367 >gi|239613603|gb|EEQ90590.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces dermatitidis ER-3] Length = 2125 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 63/209 (30%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1038 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1097 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1098 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1152 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ PFL+ + Sbjct: 1153 LRTGRDVAMACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDPFLRQKFKGTP 1212 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1213 EHVINFFYYIANEMRAIMAKLGIRTINEM 1241 >gi|269798360|ref|YP_003312260.1| guanosine monophosphate reductase [Veillonella parvula DSM 2008] gi|269094989|gb|ACZ24980.1| guanosine monophosphate reductase [Veillonella parvula DSM 2008] Length = 328 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 80/280 (28%), Gaps = 48/280 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D ++ + P++ M I+ LA A Sbjct: 10 YEDVQLIPNKCIVSSRSECDTHIKLGKRTFRLPVV-------PANMQTIIDEELAEKLAR 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQ---A 140 + + F R L S++ +F V + + Sbjct: 63 EGYF------YIMHRFQPERRMDFVKR--MHDLNLYSSISIGVKAEEFALVDEFKKENLT 114 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + D H N + E+IQ + + ++ G + + Sbjct: 115 PEYITIDIAHGHSNAVIEMIQ---------------YIKKNLPETFII--AGNVGTPEAV 157 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + ++ + Sbjct: 158 RELENAGADATKVGIGPGKVCIT-------KLKTGFGTGGWQL---AAVRWCAKAATK-P 206 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 IA GG+R+ DI KSI GA++ + S F + Sbjct: 207 IIADGGIRDHGDIAKSIRFGATMVMIGSLFAGHEESPGEE 246 >gi|88858306|ref|ZP_01132948.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas tunicata D2] gi|88819923|gb|EAR29736.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas tunicata D2] Length = 489 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 60/223 (26%), Gaps = 72/223 (32%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ A ++ G ++ +G+ + G+ + Sbjct: 256 GVIDRVTETRKAFPNLQIV--AGNVATAEGAIALADAGVDAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T +S + + IA GG+R DI+K+++ GAS + Sbjct: 308 ------RIVTGCGVPQLTAISDAVEGLKGRDIPVIADGGIRFSGDIVKALVAGASCV-MV 360 Query: 288 SPFLKPAMDSSDAVVAA------------------------------------------- 304 L +S V Sbjct: 361 GSMLAGTEESPGEVELYQGRYYKSYRGMGSLGAMNQKEGSSDRYFQNSKQAEKLVPEGIE 420 Query: 305 --------IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 I ++ + +M L G + EL + +R Sbjct: 421 GRVAYKGPIATIIHQQVGGLRSAMGLTGCATIAELNVKPQFVR 463 >gi|332967897|gb|EGK06990.1| glutamate synthase (ferredoxin) [Desmospora sp. 8437] Length = 523 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 26/241 (10%) Query: 65 TGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFE----------LRQYA 114 GG + A T + + +G + S+E ++ + Sbjct: 207 AGGTWMNTGEGGLSKYHLAGGTDIMLQIGPGLFGVRTPDGEFSWEAFQKKSEIEQVKAFE 266 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 + L+ + + + + A N +E P +F Sbjct: 267 IKLAQGAKTRGGHLDGAKVTPEIAE-IRGVEAYRSIDSPNRFKEFGDPISMLHF------ 319 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLK---SGIRYFDI-AGRGGTSWSRIESHRDL 230 I L P+ +K V + + + + + + G GGT S E + Sbjct: 320 IEKLREVGGKPVGIKLVVGDVDLERLAVAMAETGMAPDFITVDGGEGGTGASYKELADAV 379 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 I P L + + IASG L + I ++ +GA L +A F Sbjct: 380 GFPIHTAL-----PIADDLLKKYGVRDRVKLIASGKLLSPDRIAVALAMGADLVNIARGF 434 Query: 291 L 291 + Sbjct: 435 M 435 >gi|327352633|gb|EGE81490.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces dermatitidis ATCC 18188] Length = 2125 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 63/209 (30%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1038 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1097 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1098 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1152 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ PFL+ + Sbjct: 1153 LRTGRDVAMACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDPFLRQKFKGTP 1212 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1213 EHVINFFYYIANEMRAIMAKLGIRTINEM 1241 >gi|300119087|ref|ZP_07056798.1| glutamate synthase, NADPH, large subunit [Bacillus cereus SJ1] gi|298723703|gb|EFI64434.1| glutamate synthase, NADPH, large subunit [Bacillus cereus SJ1] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|188582703|ref|YP_001926148.1| glutamate synthase (ferredoxin) [Methylobacterium populi BJ001] gi|179346201|gb|ACB81613.1| Glutamate synthase (ferredoxin) [Methylobacterium populi BJ001] Length = 1577 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT + + S + + Sbjct: 1065 ISVKLVSEVGVGTVAAGVAKARADHITISGFDGGTGAAPLTSIKHAGGPWETGLAE---- 1120 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L M A GG+R G D++ +++LGA G ++ L A Sbjct: 1121 TQQTLVM-NGLRGRVALQADGGIRTGKDVMIAVLLGADQIGFSTAPLIAAGCIMMRKCHL 1179 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + +E M +G ++++L + L+ Sbjct: 1180 NTCPVGVATQDPVLRKRFKGTPEHVINYFFFVAEELRELMASMGFTKLEDLIGRSDLLDK 1239 Query: 337 Q 337 + Sbjct: 1240 R 1240 >gi|145500820|ref|XP_001436393.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403532|emb|CAK68996.1| unnamed protein product [Paramecium tetraurelia] Length = 997 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 72/331 (21%) Query: 9 HINIVCKDPGIDRNKKFFDDWHLIHRALPEI--SFDEVDPSVEFLGKKLSFPL------- 59 HI+ + L LP D +D S+ LG P Sbjct: 514 HIHNFLQKKHQIS--------QLTPDHLPSYTTEIDNIDLSINILGVNFLNPFGLASAPP 565 Query: 60 -----LI--------------------SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS 94 +I ++T + ++ + L + + S Sbjct: 566 TTSYPMIKRAFQEGWGFAVVKTFVLDKDAITNVSPRIYKSTTDPLKQDPGYANIELI--S 623 Query: 95 QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 ++ + S +++ P+ VLI ++ + D+ + + + D L L+L+ Sbjct: 624 EKSA--KYWLEGSKAIKKEFPNHVLIGSIMCQHIEQDW-RELTRKCKNEGQFDMLELNLS 680 Query: 155 PLQ---EIIQPNGNTNFADLSSKI-ALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIR 209 E+ + I ++S +D+P+++K S DI + G + Sbjct: 681 CPHGMTELGMGRACGENPAIVKDICQWVTSEIDIPVIVKITPNYPDSADIAQAAKEGGAK 740 Query: 210 YFDIAGRG---------GTSWSRI--ESHRDLESDIGIVFQDWGIPTPLSLE---MARPY 255 + GT W + E++ G + + P++L Sbjct: 741 AVTLTNTFPTLMDPDPLGTPWPAVGEENNVTYGGGCGSMLR------PIALRKTSEVAKA 794 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + SGG+ G L + GAS + Sbjct: 795 IPDIAIFGSGGIIQGDHALSFLRYGASAFQI 825 >gi|238917334|ref|YP_002930851.1| glutamate synthase (ferredoxin) [Eubacterium eligens ATCC 27750] gi|238872694|gb|ACR72404.1| glutamate synthase (ferredoxin) [Eubacterium eligens ATCC 27750] Length = 1516 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 33/197 (16%) Query: 170 DLSSKIALLSSA-MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DL+ I L +A + + +K V K+G + I+G G + + S Sbjct: 1000 DLAQLIYDLKNANKNARISVKLVSEAGVGTVASGVAKAGAQVILISGYDGGTGAAPRSSI 1059 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + G+ N+ G L +G D+ + +LGA G A+ Sbjct: 1060 ----HNAGLPWELGLAEAHQTLTMNGLRNKVIIETDGKLMSGRDVAIAAMLGAEEFGFAT 1115 Query: 289 PFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 L K + VV + + +E M LG Sbjct: 1116 APLVTMGCVMMRVCNLDTCPVGVATQNPELRKRFTGKPEYVVNFMRFIAQELREIMADLG 1175 Query: 321 TKRVQELYLNTALIRHQ 337 K + EL T L+ + Sbjct: 1176 IKTLDELVGRTDLLEQK 1192 >gi|52144783|ref|YP_082046.1| glutamate synthase, NADPH, large subunit [Bacillus cereus E33L] gi|51978252|gb|AAU19802.1| glutamate synthase, NADPH, large subunit [Bacillus cereus E33L] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|42518536|ref|NP_964466.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii NCC 533] gi|45476791|sp|P60565|GUAC_LACJO RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|41582821|gb|AAS08432.1| hypothetical protein LJ_0441 [Lactobacillus johnsonii NCC 533] gi|329666807|gb|AEB92755.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 82/268 (30%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D V+F + P++ M I+ +LAI + Sbjct: 12 YDDIQLVPNKCIIKSRSEADTGVKFGSRTFKIPVV-------PANMESVIDEDLAIWLAE 64 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNYDFGVQKAHQAVHV 143 + F + L +++ G YDF A + Sbjct: 65 HG-----YYYVMHRFYPEKRADF--IKMMHDKGLFASISVGIKDSEYDFIDYLAKE---- 113 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 N + E + +D + I + + L G + + Sbjct: 114 ----------NIIPEYTTIDVAHGHSDYVIKMIKYIKEKLPDTFLT--AGNIATPEAVRE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M + I Sbjct: 162 LENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLI 210 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R+ DI KS+ GAS+ + S F Sbjct: 211 ADGGIRHNGDIAKSVRFGASMVMIGSLF 238 >gi|238854595|ref|ZP_04644928.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 269-3] gi|260664270|ref|ZP_05865123.1| guanosine monophosphate reductase [Lactobacillus jensenii SJ-7A-US] gi|282933437|ref|ZP_06338816.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 208-1] gi|313472468|ref|ZP_07812960.1| inosine-5`-monophosphate dehydrogenase [Lactobacillus jensenii 1153] gi|238832780|gb|EEQ25084.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 269-3] gi|260562156|gb|EEX28125.1| guanosine monophosphate reductase [Lactobacillus jensenii SJ-7A-US] gi|281302451|gb|EFA94674.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 208-1] gi|313449158|gb|EEQ68892.2| inosine-5`-monophosphate dehydrogenase [Lactobacillus jensenii 1153] Length = 379 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 97/273 (35%), Gaps = 41/273 (15%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFLG-KKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI LP ++VD V+ KL+ P + + M T ++M + + Sbjct: 15 FDDVLLIPAESHVLP----NDVDLKVQLTSSLKLNLPFISAGMDTITEHEMAIAMAQAGG 70 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + +A + V + + S + H +L++ +A Sbjct: 71 LGVIHKNMTIANQANEVKLVKNTEVTSEKAAVDNDHRLLVA------AAVGVTTDTFERA 124 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMD 199 ++ A + ++ + + A + KI+ + + ++ L+ V ++ Sbjct: 125 SALIDAGANAIVIDTA--------HGHSAGVLRKISEIRAKFPNINLIAGNVA---TAAG 173 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +G+ + G+ + V G+P ++ A E Sbjct: 174 TRALYDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAANVAREY 221 Query: 260 --QFIASGGLRNGVDILKSIILGASLGGLASPF 290 IA GG++ DI+K++ G + L S F Sbjct: 222 GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMF 254 >gi|323706325|ref|ZP_08117891.1| 2-nitropropane dioxygenase NPD [Thermoanaerobacterium xylanolyticum LX-11] gi|323534377|gb|EGB24162.1| 2-nitropropane dioxygenase NPD [Thermoanaerobacterium xylanolyticum LX-11] Length = 376 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 36/262 (13%) Query: 43 EVDP-SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +++ S++ P+ + GG + N A A + + + + M Sbjct: 15 DINIKSLKIGDLVAKLPI----IQGGMGVGVSLSNLASA-VANEGGIGVISAAGIGMLE- 68 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + + +N+ A++ +K + V L + ++ I Sbjct: 69 ----------KDFATNYIEANIRALRKEIKKAREKTKGIIGVNIMVALSNFADMVKASID 118 Query: 162 PNGNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + F+ L + S VP++ E L + + G Sbjct: 119 EGIDIIFSGAGLPLNLPKFLNKTSKTKLVPIVSSERAFNLIAKRWLQKYDYLPDAVVVEG 178 Query: 216 --RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN----EAQFIASGGLRN 269 GG E + + + ++ LE R Y + IA+GG+ Sbjct: 179 PMAGGHLGYSSEQISSPDYSLDKILKNV-------LEETRQYEKISGRQIPVIAAGGIYT 231 Query: 270 GVDILKSIILGASLGGLASPFL 291 G DI K + +GA+ +A+ F+ Sbjct: 232 GEDIYKYLKMGAAGVQMATRFV 253 >gi|312904962|ref|ZP_07764100.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0635] gi|310631718|gb|EFQ15001.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0635] gi|315160635|gb|EFU04652.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0645] gi|315579481|gb|EFU91672.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0630] Length = 322 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|227553709|ref|ZP_03983758.1| dihydroorotate oxidase [Enterococcus faecalis HH22] gi|229548268|ref|ZP_04436993.1| dihydroorotate oxidase [Enterococcus faecalis ATCC 29200] gi|307272153|ref|ZP_07553413.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0855] gi|307275272|ref|ZP_07556417.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX2134] gi|307292482|ref|ZP_07572332.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0411] gi|312900579|ref|ZP_07759878.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0470] gi|227177166|gb|EEI58138.1| dihydroorotate oxidase [Enterococcus faecalis HH22] gi|229306484|gb|EEN72480.1| dihydroorotate oxidase [Enterococcus faecalis ATCC 29200] gi|306496455|gb|EFM66022.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0411] gi|306508052|gb|EFM77177.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX2134] gi|306511042|gb|EFM80052.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0855] gi|311292303|gb|EFQ70859.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0470] gi|315026147|gb|EFT38079.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX2137] gi|315146761|gb|EFT90777.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX4244] gi|315167849|gb|EFU11866.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX1341] gi|315574778|gb|EFU86969.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0309B] gi|315582167|gb|EFU94358.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0309A] Length = 322 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|254459323|ref|ZP_05072744.1| inosine-5'-monophosphate dehydrogenase [Campylobacterales bacterium GD 1] gi|207083936|gb|EDZ61227.1| inosine-5'-monophosphate dehydrogenase [Campylobacterales bacterium GD 1] Length = 481 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 ++ + + + + + + M+V ++ G ++ + +++G + G Sbjct: 241 LVLDSAHGHSKGILDTVRKIKETMEVDVIA---GNIATAEAVLALIEAGADGVKVGIGPG 297 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKS 276 + + + G+P ++ + IA GG++ DI K+ Sbjct: 298 SICTT------------RIVAGVGVPQISAISECADEARKHGVPVIADGGIKYSGDIAKA 345 Query: 277 IILGASLGGLASPFLKPAMDSSDAVV 302 + +GAS +A L +S + Sbjct: 346 LAVGASCI-MAGSLLAGTEESPGDTI 370 >gi|254283130|ref|ZP_04958098.1| glutamate synthase domain family protein [gamma proteobacterium NOR51-B] gi|219679333|gb|EED35682.1| glutamate synthase domain family protein [gamma proteobacterium NOR51-B] Length = 1495 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + G+ Sbjct: 1010 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRYAGSP-----WELGLA 1064 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + + A GG++ G+D++K+ ILGA G +P + Sbjct: 1065 EVQQTLRGNRLRGKIRLQADGGMKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1124 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + V+ + E + LG R+ +L T L++ Sbjct: 1125 NNCATGVATQNATLREEHFVGDVERVINFFTFVADETREWLAKLGVARIDDLIGRTDLLQ 1184 Query: 336 H 336 Sbjct: 1185 R 1185 >gi|116493447|ref|YP_805182.1| inosine-5'-monophosphate dehydrogenase [Pediococcus pentosaceus ATCC 25745] gi|116103597|gb|ABJ68740.1| inosine-5'-monophosphate dehydrogenase [Pediococcus pentosaceus ATCC 25745] Length = 380 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 93/296 (31%), Gaps = 47/296 (15%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +E D S + KL+ P++ + M Sbjct: 5 DNKFTKQGLTFDDVLLIPGESHVLP----NEADVSTQLADNIKLNIPIISAGMDTVTESA 60 Query: 72 IERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELR-QYAPHTVLISNLGA-VQ 127 + A + + + + +K+ ++ + PH + V Sbjct: 61 MGI------SMARQGGLGVIHKNMSAEQQASEVSIVKNADVNLEDNPHAAVDDQGRLLVA 114 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLL 187 +A ++ A + ++ + + A + K+A + L Sbjct: 115 AAVGVTSDTFERAQGLIDAGADAIVIDTA--------HGHSAGVLRKVAEIREHFPKQTL 166 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 + G ++ +G+ + G+ + V G+P Sbjct: 167 I--AGNVATADGTRALFDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQIT 212 Query: 248 SLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 ++ A E + IA GG++ DI+K+++ G L + +D Sbjct: 213 AIYDAANVAREYGKKIIADGGIKFSGDIVKALVAGGDAV-----MLGSMLSGTDET 263 >gi|237752085|ref|ZP_04582565.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis ATCC BAA-430] gi|229376652|gb|EEO26743.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis ATCC BAA-430] Length = 483 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 65/184 (35%), Gaps = 26/184 (14%) Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + G +++ GV + +A ++ A L L+ + + + I + Sbjct: 211 DDFGRLRVGAAIGVFQYERARALVDAGVDVLVLDSA--------HGHSKGILETIKTIKK 262 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + V ++ V G + + +G+ + G+ + + Sbjct: 263 DLVVDIVAGNVATG---EGAQALIDAGVDGVKVGIGPGSICTT------------RIVAG 307 Query: 241 WGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 G+P +++ C + IA GG++ DI K++ +GAS + L +S Sbjct: 308 VGVPQITAIDAVAKVCQKAQIPVIADGGIKYSGDIAKALAVGASSV-MIGSMLAGTEESP 366 Query: 299 DAVV 302 + Sbjct: 367 GETI 370 >gi|195132127|ref|XP_002010495.1| GI15959 [Drosophila mojavensis] gi|193908945|gb|EDW07812.1| GI15959 [Drosophila mojavensis] Length = 403 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 111/335 (33%), Gaps = 72/335 (21%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQRVMFS 100 D V+ + F G+ +S P+ +++ G ++ E ++ + +GS + Sbjct: 73 DNVNLNSSFFGRHISNPIGLAA---GFDRNGEAVHGL-----KDLGFGFIEIGSVTPLAQ 124 Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN------ 154 + + + + +I+ + VQ+ + G D + + +N Sbjct: 125 KASPRP--RVFRLSDDRAIINRNSIDSDGHQAVVQRLRRLRETDGFDAV-VGVNLEHNLS 181 Query: 155 ---PLQEII------------------QPNGNTNFADLSSKIALLSSAMD---------- 183 P+ + + G + ++ L A++ Sbjct: 182 SRTPISDYMSGVKTFGPVADYLVVNYSNAKGKRHSTSSKKQLIELLEAVNTARSQLRPNR 241 Query: 184 ---VPLLLK-----EVGCGLSSMDIELGLKSGIRYFDIAGRGGT----SWSRIESHRDLE 231 VP+LLK + + + +A T + S R+ Sbjct: 242 YGKVPILLKLSPDMTLDEMKDVASVISMSTCQVDGLIVANA--TMVHKNVSGSRWLREKG 299 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + G + T + +M + N I GG+ +G D + I GAS + + F+ Sbjct: 300 ALSGEPLRQ--RSTAMIAQMYQLINNSVPIIGVGGVSSGHDAFEKIEAGASYVQIYTAFV 357 Query: 292 KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + +E ++ E + + +G + ++E Sbjct: 358 Y---EGPE----LVERIKSELSMCIAEMGYENIRE 385 >gi|119512336|ref|ZP_01631421.1| inositol-5-monophosphate dehydrogenase [Nodularia spumigena CCY9414] gi|119462987|gb|EAW43939.1| inositol-5-monophosphate dehydrogenase [Nodularia spumigena CCY9414] Length = 387 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 58/203 (28%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 +A +M +P+ L G ++ LK+G + G + + Sbjct: 179 LAEFCRSMPIPVAL---GNCVTYEVTLNLLKAGAAAVLVGIGPGAACT------------ 223 Query: 235 GIVFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGL 286 GIP ++ ++ IA GGL G DI K I GA + Sbjct: 224 SRGVLGVGIPQATAIADCAAARDDYYQETGNYIPIIADGGLITGGDICKCIACGADGVMI 283 Query: 287 ASPFLKPA-----------------------------------MDSSDAVVAAIESLRKE 311 SPF + A + + +L Sbjct: 284 GSPFARAAEAPGRGYHWGMATPSPVLPRGTRISVGTTGSLEQILIGPAGLDDGTHNLVGA 343 Query: 312 FIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 344 LKTSMGTLGAKNIKEMQKVEVVI 366 >gi|302524091|ref|ZP_07276433.1| inositol-5-monophosphate dehydrogenase [Streptomyces sp. AA4] gi|302432986|gb|EFL04802.1| inositol-5-monophosphate dehydrogenase [Streptomyces sp. AA4] Length = 392 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 71/261 (27%), Gaps = 75/261 (28%) Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 + Q + V +L G + +Q +P F +DV Sbjct: 158 SPQHAAELTPDLIAAGVEILVVQGTIISAEHVQRDAEPLNLKEFIG----------RLDV 207 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 P++ V +++G + G G E + + GI Sbjct: 208 PVIAGGVS---DYRTAMHLMRTGAAGVIV-GHG-----YTEGVTSTDRVL-------GIG 251 Query: 245 TPLSLEMA------RPYCNE-----AQFIASGGLRNGVDILKSIILGASLGGLASPF--- 290 TP++ + R Y +E +A GG+ DI K+I GA L +P Sbjct: 252 TPMATAIVDAAAARRDYLDETGGRYVHVLADGGITTSGDIAKAIACGADAVMLGAPLATA 311 Query: 291 -----------------------------------LKPAMDSSDAVVAAIESLRKEFIVS 315 LK + + + +L + Sbjct: 312 SDAPGQGLYWTAAAAHPSLPRSRVVAGPDSDYAVDLKTLLFGPSSDAEGVVNLFGALRRA 371 Query: 316 MFLLGTKRVQELYLNTALIRH 336 M G ++E +R Sbjct: 372 MAKTGYSDLKEFQRVGLTVRG 392 >gi|212691473|ref|ZP_03299601.1| hypothetical protein BACDOR_00965 [Bacteroides dorei DSM 17855] gi|212665953|gb|EEB26525.1| hypothetical protein BACDOR_00965 [Bacteroides dorei DSM 17855] Length = 335 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 104/316 (32%), Gaps = 51/316 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS----- 100 F G L P++ISS + N+ N+ L +A V +V +++M Sbjct: 15 LKTTFAGLSLRNPIIISSSSLTNSAEK---NKKLELAGAGAIVLKSVFEEQIMMEAHHMA 71 Query: 101 ------DHNAIKSF----------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + ++ L + I + ++ + + V Sbjct: 72 TYGSPEGDDYLSTYVRSHALNEYISLIEQTKKLCTIPVIASINCFSNSEWTDFARTVETA 131 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L +++ LQ + + ++ + + +P+++K + + I Sbjct: 132 GADALEINILSLQTEKEYQCGSFEQRHIDIVSSIKKQISIPVIVKLGSNLTNPIALINQL 191 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG--IPTPLSL-------EMARP 254 +G + R + +I + G TP L +A Sbjct: 192 YANGANAVVLFNR----------FYQPDINIDTMTYSAGDVFSTPADLSNGLRWTAIASA 241 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + SGG+ +G I+K+I+ GAS L S + I + E Sbjct: 242 QVPQTDYAISGGVHDGKAIVKAILAGASAVELCSVIYQRGN-------QVIADMTNEITQ 294 Query: 315 SMFLLGTKRVQELYLN 330 M G K + E + Sbjct: 295 WMNRQGYKNISEFKSS 310 >gi|192361435|ref|YP_001983601.1| glutamate synthase subunit alpha [Cellvibrio japonicus Ueda107] gi|190687600|gb|ACE85278.1| glutamate synthase large chain precursor [Cellvibrio japonicus Ueda107] Length = 1484 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 37/173 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + G+ Sbjct: 998 VSVKLVSRPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIKYAGSP-----WELGLS 1052 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL----------- 291 T +L A ++ + GGL+ G+D++K+ +LGA G P + Sbjct: 1053 ETHQTLR-ANDLRDKVRVQTDGGLKTGLDVVKAAMLGAESFGFGTGPMVALGCKYLRICH 1111 Query: 292 -----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + + + + +E M LG + + EL Sbjct: 1112 LNNCATGVATQQDKLRQDHYIGTVEMAMNFFKFMAEETREWMARLGVRSLAEL 1164 >gi|218901671|ref|YP_002449505.1| putative glutamate synthase, large subunit [Bacillus cereus AH820] gi|228925718|ref|ZP_04088804.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120126|ref|ZP_04249378.1| Glutamate synthase, large subunit [Bacillus cereus 95/8201] gi|218540095|gb|ACK92493.1| putative glutamate synthase, large subunit [Bacillus cereus AH820] gi|228663364|gb|EEL18952.1| Glutamate synthase, large subunit [Bacillus cereus 95/8201] gi|228833940|gb|EEM79491.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|311029197|ref|ZP_07707287.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. m3-13] Length = 327 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 84/275 (30%), Gaps = 40/275 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D L+ S E D +V G++ P++ M I+ +A Sbjct: 7 YEDIQLVPNKCVVNSRSECDTTVTLGGRQFKLPVV-------PANMQTIIDEKIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + + ++F I N+ A L V + + Sbjct: 55 LYLAENNYFYIMHRFEPQKRQAF-----------IENMHAKGLYASISVGVKEEEYSFVE 103 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 N E I + ++ + + I + + ++ G + + Sbjct: 104 ELAAA---NLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVI--AGNVGTPEAVRELE 158 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L + ++ IA Sbjct: 159 HAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRLCAKAASK-PIIAD 207 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 GG+R DI KS+ GA++ + S F + Sbjct: 208 GGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGE 242 >gi|261192958|ref|XP_002622885.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces dermatitidis SLH14081] gi|239589020|gb|EEQ71663.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces dermatitidis SLH14081] Length = 2048 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 63/209 (30%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 961 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1020 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1021 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1075 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ PFL+ + Sbjct: 1076 LRTGRDVAMACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDPFLRQKFKGTP 1135 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1136 EHVINFFYYIANEMRAIMAKLGIRTINEM 1164 >gi|126651914|ref|ZP_01724106.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. B14905] gi|126591183|gb|EAZ85292.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. B14905] Length = 327 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 89/268 (33%), Gaps = 44/268 (16%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + E S E D SV G P++ M I+ LA Sbjct: 7 YEDIQLIPAKCIVE-SRSECDTSVTLGGHTFKLPVV-------PANMQTIIDETLAK--- 55 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHV 143 K+A + A +F Q + LI+++ GV++ A + Sbjct: 56 --KLAENGYFYIMHRFQPEARINF--IQDMHGSGLIASIS-------VGVKEEEYAFIEE 104 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L A N + + I + ++ + I + + ++ G + + Sbjct: 105 LAA------TNVVPDFITIDIAHGHSNAVIRMIQHIKKHLPNSFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L + I Sbjct: 157 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAATK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R DI KS+ GAS+ + S F Sbjct: 206 ADGGIRTHGDIAKSVRFGASMVMIGSLF 233 >gi|30260688|ref|NP_843065.1| glutamate synthase, large subunit, putative [Bacillus anthracis str. Ames] gi|50196914|ref|YP_052609.1| glutamate synthase, large subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|165870775|ref|ZP_02215428.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0488] gi|167634747|ref|ZP_02393066.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0442] gi|167640787|ref|ZP_02399046.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0193] gi|170688549|ref|ZP_02879755.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0465] gi|170707117|ref|ZP_02897573.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0389] gi|177655113|ref|ZP_02936743.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0174] gi|190568237|ref|ZP_03021146.1| putative glutamate synthase, large subunit [Bacillus anthracis Tsiankovskii-I] gi|227816597|ref|YP_002816606.1| putative glutamate synthase, large subunit [Bacillus anthracis str. CDC 684] gi|229603933|ref|YP_002865134.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0248] gi|254686917|ref|ZP_05150775.1| putative glutamate synthase, large subunit [Bacillus anthracis str. CNEVA-9066] gi|254725997|ref|ZP_05187779.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A1055] gi|254738856|ref|ZP_05196558.1| putative glutamate synthase, large subunit [Bacillus anthracis str. Western North America USA6153] gi|254743760|ref|ZP_05201445.1| putative glutamate synthase, large subunit [Bacillus anthracis str. Kruger B] gi|254756299|ref|ZP_05208328.1| putative glutamate synthase, large subunit [Bacillus anthracis str. Vollum] gi|254762118|ref|ZP_05213967.1| putative glutamate synthase, large subunit [Bacillus anthracis str. Australia 94] gi|30254056|gb|AAP24551.1| putative glutamate synthase, large subunit [Bacillus anthracis str. Ames] gi|50082976|gb|AAT70117.1| putative glutamate synthase, large subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|164713609|gb|EDR19133.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0488] gi|167511181|gb|EDR86568.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0193] gi|167529821|gb|EDR92569.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0442] gi|170127895|gb|EDS96766.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0389] gi|170667409|gb|EDT18166.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0465] gi|172080262|gb|EDT65352.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0174] gi|190560729|gb|EDV14705.1| putative glutamate synthase, large subunit [Bacillus anthracis Tsiankovskii-I] gi|227004088|gb|ACP13831.1| putative glutamate synthase, large subunit [Bacillus anthracis str. CDC 684] gi|229268341|gb|ACQ49978.1| putative glutamate synthase, large subunit [Bacillus anthracis str. A0248] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|319957283|ref|YP_004168546.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis DSM 16511] gi|319419687|gb|ADV46797.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis DSM 16511] Length = 481 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 86/232 (37%), Gaps = 28/232 (12%) Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVA-MAVGSQRVMFSDHNAIKSFELRQYAPHTVLI 120 + M K ++ A ++ K+ + + + + + IK E R+ P+ Sbjct: 153 TPMPLVTAKKGTSLDEA-AKVLQEHKIEKLPIVDENGILTGLITIKDIEKREQYPNANK- 210 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 G +++ GV + +A ++ A + L+ Q + + ++ + Sbjct: 211 DEFGRLRVGAAIGVGQLDRAKALVEAGVDVIVLDSAHGHSQ--------GIIDTLKMIKA 262 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 +DV ++ + G ++ D +++G + G+ + + Sbjct: 263 ELDVDVIAGNIATGAAAAD---LIEAGADAVKVGIGPGSICTT------------RIVAG 307 Query: 241 WGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P +++ N IA GG++ DI K++ +GAS L S Sbjct: 308 VGVPQISAIDEVAQVANPMGVPVIADGGIKYSGDIAKALAVGASSVMLGSAL 359 >gi|270292525|ref|ZP_06198736.1| dihydroorotate oxidase [Streptococcus sp. M143] gi|270278504|gb|EFA24350.1| dihydroorotate oxidase [Streptococcus sp. M143] Length = 311 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMAEKGYENLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|237712086|ref|ZP_04542567.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 9_1_42FAA] gi|237726242|ref|ZP_04556723.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. D4] gi|265751788|ref|ZP_06087581.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 3_1_33FAA] gi|229434768|gb|EEO44845.1| dihydroorotate dehydrogenase 2 [Bacteroides dorei 5_1_36/D4] gi|229453407|gb|EEO59128.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 9_1_42FAA] gi|263236580|gb|EEZ22050.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 3_1_33FAA] Length = 324 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 104/316 (32%), Gaps = 51/316 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS----- 100 F G L P++ISS + N+ N+ L +A V +V +++M Sbjct: 4 LKTTFAGLSLRNPIIISSSSLTNSAEK---NKKLELAGAGAIVLKSVFEEQIMMEAHHMA 60 Query: 101 ------DHNAIKSF----------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + ++ L + I + ++ + + V Sbjct: 61 TYGSPEGDDYLSTYVRSHALNEYISLIEQTKKLCTIPVIASINCFSNSEWTDFARTVETA 120 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L +++ LQ + + ++ + + +P+++K + + I Sbjct: 121 GADALEINILSLQTEKEYQCGSFEQRHIDIVSSIKKQISIPVIVKLGSNLTNPIALINQL 180 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG--IPTPLSL-------EMARP 254 +G + R + +I + G TP L +A Sbjct: 181 YANGANAVVLFNR----------FYQPDINIDTMTYSAGDVFSTPADLSNGLRWTAIASA 230 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + SGG+ +G I+K+I+ GAS L S + I + E Sbjct: 231 QVPQTDYAISGGVHDGKAIVKAILAGASAVELCSVIYQRGN-------QVIADMTNEITQ 283 Query: 315 SMFLLGTKRVQELYLN 330 M G K + E + Sbjct: 284 WMNRQGYKNISEFKSS 299 >gi|330506428|ref|YP_004382856.1| glutamate synthase [Methanosaeta concilii GP-6] gi|328927236|gb|AEB67038.1| glutamate synthase [Methanosaeta concilii GP-6] Length = 504 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 92/277 (33%), Gaps = 45/277 (16%) Query: 42 DEVDPSVEF-LGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS------ 94 +EV+ + + + P++ S+M+ G + +LA AA K G Sbjct: 153 EEVEIATQLSPNLMVEMPIVFSAMSFGAISYNAFL--SLATAASKLGTYFNTGEGGLPRE 210 Query: 95 QRVMFSDHNAIKS----FELRQYAPHTVLISNLGAVQ-----LNYDFGVQKAHQAVHVLG 145 R F H ++ F + + + Q + +K +V Sbjct: 211 MREKFGKHAIVQVASGRFGIDAEYLNCAAAVEIKVGQGAKPGIGGHLPGEKVSVSVSATR 270 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSK---IALLSSAMDV--PLLLKEVGCGLSSMDI 200 + + I P + + + I + A + P+ +K + Sbjct: 271 M------IPVGTDAISPAPHHDIYSIEDLSMLIHAIKEATNYEKPVSVKIAAVHNFAAIA 324 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARP 254 + +G I G G + + + RD + GIP L++ Sbjct: 325 AGIVHAGADIIAIDGLRGGTGAAPKVIRD----------NVGIPIELAISSLDRRLRQDG 374 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 N IA+GG+R D++K+I LGA + S L Sbjct: 375 IRNRCSIIAAGGIRCSADVIKAIALGADATYIGSAAL 411 >gi|49480133|ref|YP_034791.1| glutamate synthase, NADPH, large subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331689|gb|AAT62335.1| glutamate synthase, NADPH, large subunit [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNIEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|49183526|ref|YP_026778.1| glutamate synthase, large subunit [Bacillus anthracis str. Sterne] gi|49177453|gb|AAT52829.1| glutamate synthase, large subunit, putative [Bacillus anthracis str. Sterne] Length = 1478 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|240273754|gb|EER37273.1| glutamate synthase [Ajellomyces capsulatus H143] Length = 2124 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1032 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1091 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1092 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1146 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1147 LRTGRDVAMACLLGAEEWGFATTPLIAMGCVMMRKCHLNTCPVGIATQDPLLRQKFSGTP 1206 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1207 EHVINFFYYIANELRAIMAKLGIRTINEMVGRADLLK 1243 >gi|71083353|ref|YP_266072.1| IMP dehydrogenase-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062466|gb|AAZ21469.1| IMP dehydrogenase-like protein [Candidatus Pelagibacter ubique HTCC1062] Length = 358 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 93/270 (34%), Gaps = 47/270 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD + + E+ EVD S + L PLL S+M T +KM AIA Sbjct: 10 FDDVTMAPK-YSEVLPSEVDTSTKLSSNLTLKIPLLSSAMDTVTESKM--------AIAI 60 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVH 142 K +G ++ E+++ + ++ + +GA L + V Sbjct: 61 AKAG---GIGVIHRNLDIKKQVE--EIKKVKKLNLLVGAAVGAGPLELKRAKAILKEKVD 115 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ D H + EII L + L + G ++ + Sbjct: 116 LIVVDTAHGHSKKVAEII-----KAIKKLKTNKTTLCA-----------GNIATAEAAKF 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-- 260 +K G+ + G+ + + G+P ++ + + Sbjct: 160 LIKLGVDIIKVGIGPGSICTT------------RLVAGIGVPQLSAILAVKKGVKNNKVK 207 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF 290 I+ GG++ D+ K++ GA + S F Sbjct: 208 IISDGGIKYSGDLAKALSAGADAIMIGSLF 237 >gi|254168170|ref|ZP_04875017.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] gi|197622936|gb|EDY35504.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] Length = 482 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ L G + + G +A +L A+ + ++ + + Sbjct: 204 RERYPNA-LRDKDGRLMVGAAIGPFDIERAKRLLQAEVDVIVIDTAHAHNE--------N 254 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + I + +DV L+ G + E + + + G+ + Sbjct: 255 VMKSIKKIRKEVDVDLIA---GNIATKEAAEDLIALDVDALRVGIGPGSICTT------- 304 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G+P ++ + IA GG+R DI+K++ GAS Sbjct: 305 -----RVVAGIGVPQLEAISQTSDVAKKYNVPVIADGGIRYSGDIVKALSAGASAV---- 355 Query: 289 PFLKPAMDSSDA 300 L + ++ Sbjct: 356 -MLGSLLAGTEE 366 >gi|113460566|ref|YP_718630.1| inosine 5'-monophosphate dehydrogenase [Haemophilus somnus 129PT] gi|112822609|gb|ABI24698.1| inosine-5'-monophosphate dehydrogenase [Haemophilus somnus 129PT] Length = 487 Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 79/294 (26%), Gaps = 83/294 (28%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D+ +S +GA + G ++ +A+ G D L + Sbjct: 196 ITLKDYQKAES--KPNACKDEFGRLRVGAA-VGAGPGNEERIEALVNAGVDILLI----- 247 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + + ++ + ++P++ G ++ +G + Sbjct: 248 -----DSSHGHSEGVLQRVRETRAKYPNLPIIA---GNIATAEGAIALADAGASAVKVGI 299 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDI 273 G+ + + G+P ++ A E IA GG+R DI Sbjct: 300 GPGSICTT------------RIVTGVGVPQITAIADAAEALRERGIPVIADGGIRYSGDI 347 Query: 274 LKSIILGASLGGLASPFL------------------------------------------ 291 K+I GAS + S F Sbjct: 348 AKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMSKGSSDRYFQSDN 407 Query: 292 ---KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + I M L G ++EL +R Sbjct: 408 AADKLVPEGIEGRIPYKGLLKEIIHQQMGGLRSCMGLTGCATIEELRTKAQFVR 461 >gi|261867630|ref|YP_003255552.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412962|gb|ACX82333.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 488 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++P++ G ++ +G + G+ + Sbjct: 257 GVLQRVRETRAKYPNLPIIA---GNIATAEGAIALADAGASAVKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K+I GAS + Sbjct: 309 -------RIVTGVGVPQITAISDAAEALKDRGIPVIADGGIRYSGDIAKAIAAGASCVMV 361 Query: 287 ASPFL---------------------------------------------KPAMDSSDA- 300 S F K + + Sbjct: 362 GSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMAKGSSDRYFQSDNAADKLVPEGIEGR 421 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I M L G + EL +R Sbjct: 422 IPYKGLLKEIIHQQMGGLRSCMGLTGCATIDELRTKAQFVR 462 >gi|163738089|ref|ZP_02145505.1| Glutamate synthase (ferredoxin) [Phaeobacter gallaeciensis BS107] gi|161388705|gb|EDQ13058.1| Glutamate synthase (ferredoxin) [Phaeobacter gallaeciensis BS107] Length = 1510 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|325957675|ref|YP_004293087.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus acidophilus 30SC] gi|325334240|gb|ADZ08148.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus acidophilus 30SC] gi|327184322|gb|AEA32769.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus amylovorus GRL 1118] Length = 324 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD LI S + D SV+F + P++ M IN +LA+ + Sbjct: 6 YDDIQLIPNKGIIKSRRDADTSVKFGSRTFKIPVV-------PANMESVINDDLAVWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVHVL 144 + + F ++ + S +G YDF + Q L Sbjct: 59 NG-----YYYVMHRFEPEKRIPF-IKMMHEKGLFASISVGIKDSEYDFIDELVKQ---NL 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + L G + + Sbjct: 110 KPEYITIDV----------AHGHSVYVIKMIKYIKEKLPDSFLT--AGNIATPEAVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + +L M ++ IA Sbjct: 158 NAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKVASK-PLIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R+ DI KS+ GA++ + L +S V+ Sbjct: 207 GGIRHNGDIAKSVRFGATMV-MIGSMLAGHQESPGNVIK 244 >gi|254167939|ref|ZP_04874787.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] gi|289596005|ref|YP_003482701.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] gi|197622982|gb|EDY35549.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] gi|289533792|gb|ADD08139.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei T469] Length = 482 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 31/192 (16%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ L G + + G +A +L A+ + ++ + + Sbjct: 204 REKYPNA-LRDKDGRLMVGAAIGPFDIERAKRLLQAEVDVIVIDTAHAHNE--------N 254 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + I + +DV L+ G + E + + + G+ + Sbjct: 255 VMKSIKKIRKEVDVDLIA---GNIATKEAAEDLIALDVDALRVGIGPGSICTT------- 304 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G+P ++ E IA GG+R DI+K++ GAS Sbjct: 305 -----RVVAGIGVPQLEAISQTSDVAKEYNVPVIADGGIRYSGDIVKALSAGASAV---- 355 Query: 289 PFLKPAMDSSDA 300 L + ++ Sbjct: 356 -MLGSLLAGTEE 366 >gi|124008914|ref|ZP_01693600.1| oxidoreductase, 2-nitropropane dioxygenase family [Microscilla marina ATCC 23134] gi|123985475|gb|EAY25374.1| oxidoreductase, 2-nitropropane dioxygenase family [Microscilla marina ATCC 23134] Length = 358 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 14/110 (12%) Query: 197 SMDIELGLKSGIRYFDIAGR--GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + L ++G+ +G GG + ++++ D TP SL Sbjct: 164 PEEALLLEEAGVDIIVASGAQAGGHRAWFLPKNKEVLMD-----------TP-SLLTQTT 211 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA+GG+ NG + ++ GAS + + FL ++ V Sbjct: 212 AQVKTPVIAAGGITNGQEAFSALQAGASAVQIGTAFLATQESNAPDVHKH 261 >gi|323488749|ref|ZP_08093990.1| guanosine 5'-monophosphate oxidoreductase [Planococcus donghaensis MPA1U2] gi|323397628|gb|EGA90433.1| guanosine 5'-monophosphate oxidoreductase [Planococcus donghaensis MPA1U2] Length = 327 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 87/265 (32%), Gaps = 38/265 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D L+ S E D S+EF G+ P++ M ++ LA Sbjct: 7 YEDIQLVPAKAVVNSRSECDTSIEFGGRTFKLPVV-------PANMQTIVDEKLA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + + F + L +++ ++ + A + Sbjct: 55 GYLAKNNYFYIMHRFEPEKRIGFT--KDMQQRGLYASISVGVKPEEYEFVQ-QLADEKIT 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + + L+ G + + Sbjct: 112 PEYITIDV--------AHGHSNA--VINMIKHIKNLVPGSFLI--AGNVGTPEAVRELEH 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KS+ GAS+ + S F Sbjct: 209 GIRTHGDIAKSVRFGASMVMIGSLF 233 >gi|270290036|ref|ZP_06196262.1| IMP dehydrogenase [Pediococcus acidilactici 7_4] gi|270281573|gb|EFA27405.1| IMP dehydrogenase [Pediococcus acidilactici 7_4] Length = 380 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 51/288 (17%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +E D + + KL+ P++ + M + Sbjct: 15 FDDVLLIPGESHVLP----NEADITTQLADNLKLNIPIISAGMDTVTESAMGI------A 64 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN------LGAVQLNYDFGVQ 135 A + + + + K + L A + Sbjct: 65 MARQGGLGVIHKNMSADQQAAEVRKVKTADVDFDDNPKAAVDDQDRLLIAAAVGVTSDTF 124 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + +A+ G D + + + + A + KIA + L+ G Sbjct: 125 ERAEALIEAGVDAIVI----------DTAHGHSAGVLRKIAEIREHFPDQTLI--AGNVA 172 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ ++G+ + G+ + V G+P ++ A Sbjct: 173 TAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAAGV 220 Query: 256 CNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 E Q IA GG++ DI+K+++ G + L + +D Sbjct: 221 AREYGKQIIADGGIKFSGDIVKALVAGGNAV-----MLGSMLSGTDET 263 >gi|229194845|ref|ZP_04321631.1| Glutamate synthase, large subunit [Bacillus cereus m1293] gi|228588630|gb|EEK46662.1| Glutamate synthase, large subunit [Bacillus cereus m1293] Length = 1478 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|222094265|ref|YP_002528322.1| glutamate synthase, nadph, large subunit [Bacillus cereus Q1] gi|221238320|gb|ACM11030.1| glutamate synthase, NADPH, large subunit [Bacillus cereus Q1] Length = 1478 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|312127330|ref|YP_003992204.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor hydrothermalis 108] gi|312793833|ref|YP_004026756.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor kristjanssonii 177R1B] gi|311777349|gb|ADQ06835.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor hydrothermalis 108] gi|312180973|gb|ADQ41143.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 488 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 62/237 (26%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D ++ L A V +++ + G S ++ +AG + + E Sbjct: 229 KDTDERVDALVKA-QVDVIVVDTAHGHSKGVIETVKRIKSRYPHIQVVAG----NIATAE 283 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ E IA GG+R Sbjct: 284 AARDLIEAGADCVKVGIGPGSICTTRVVAGIGVPQITAIMDVAEVAKEYGIPVIADGGIR 343 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI K++ GA + + S F Sbjct: 344 YSGDITKALAAGADVVMIGSLFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRY 403 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + L M G + ++EL ++ Sbjct: 404 FQEDASKLVPEGVEGRVPYKGPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|284006290|emb|CBA71525.1| inosine-5'-monophosphate dehydrogenase [Arsenophonus nasoniae] Length = 489 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 61/222 (27%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + D+P++ V G + ++G + G+ + Sbjct: 258 GVLQRIRETRAKYPDLPIIGGNVATG---EGAKALAEAGASAVKVGIGPGSICTT----- 309 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K++ GAS + Sbjct: 310 -------RIVTGVGVPQITAIADAVEALDGMNIPVIADGGIRFSGDIAKALAAGASCV-M 361 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 362 VGSMLAGTEESPGETILFQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEG 421 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++++ + M L G + EL +R Sbjct: 422 RVAYKGLLKNIVHQQMGGLRSCMGLTGCATIDELRSKAEFVR 463 >gi|227432365|ref|ZP_03914357.1| possible IMP dehydrogenase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351886|gb|EEJ42120.1| possible IMP dehydrogenase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 328 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 113/330 (34%), Gaps = 57/330 (17%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNK----MIERIN 76 +D L+ LP V + +L+ PL+ + G +N Sbjct: 11 GYDQVLLVPGASNVLP----YSVTLRTQLSENFELNIPLVSDAF--GPETDTRVATTALN 64 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 L + AE+ ++ V S + + + + P+ ++ S + V Sbjct: 65 GGLGVVAEQEDLSKQVASLQQV--KETVVDT----DKYPNALVDSQNHLRVAAEVWLVAG 118 Query: 137 AHQAVHVL---GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 A V L GAD +F +L+ T + I + A + VG Sbjct: 119 AETRVAALVNAGADAIFFYLH----------ETLAKNTRDLIKQIRQAHPDLFIA--VGV 166 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++G +AGR +ES L +DI F + +++ Sbjct: 167 VEDQSIAAALYEAGADTI-LAGR------SVES--SLPNDITYPF----LTVTMNIADVA 213 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA----IESLR 309 + IA GG+ DI+K+I GA + S LK ++ SD I+ Sbjct: 214 AAYDNKSVIAVGGIHYSGDIVKAIAAGADAT-MVSDLLKGSVLESDGSFKEGDMSIDDAI 272 Query: 310 KE----FIVSMFLLGTKRVQELYLNTALIR 335 + M G++ ++ L LN +++ Sbjct: 273 FQTDGGLRAGMGYTGSQTIESLKLNAKIVQ 302 >gi|91762217|ref|ZP_01264182.1| IMP dehydrogenase-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718019|gb|EAS84669.1| IMP dehydrogenase-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 358 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 93/270 (34%), Gaps = 47/270 (17%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD + + E+ EVD S + L PLL S+M T +KM AIA Sbjct: 10 FDDVTMAPK-YSEVLPSEVDTSTKLSSNLTLKIPLLSSAMDTVTESKM--------AIAI 60 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVH 142 K +G ++ E+++ + ++ + +GA L + V Sbjct: 61 AKAG---GIGVIHRNLDIKKQVE--EIKKVKKLNLLVGAAVGAGPLELKRAEAILKEKVD 115 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ D H + EII L + L + G ++ + Sbjct: 116 LIVVDTAHGHSKKVAEII-----KAIKKLKTNKTTLCA-----------GNIATAEAAKF 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ-- 260 +K G+ + G+ + + G+P ++ + + Sbjct: 160 LIKLGVDIIKVGIGPGSICTT------------RLVAGIGVPQLSAILAVKKGVKNNKVK 207 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPF 290 I+ GG++ D+ K++ GA + S F Sbjct: 208 IISDGGIKYSGDLAKALSAGADAIMIGSLF 237 >gi|42779665|ref|NP_976912.1| glutamate synthase, large subunit, putative [Bacillus cereus ATCC 10987] gi|42735582|gb|AAS39520.1| glutamate synthase, large subunit, putative [Bacillus cereus ATCC 10987] Length = 1478 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|312877453|ref|ZP_07737416.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor lactoaceticus 6A] gi|311795774|gb|EFR12140.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor lactoaceticus 6A] Length = 488 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 62/237 (26%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D ++ L A V +++ + G S ++ +AG + + E Sbjct: 229 KDTDERVDALVKA-QVDVIVVDTAHGHSKGVIETVKRIKSRYPHIQVVAG----NIATAE 283 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ E IA GG+R Sbjct: 284 AARDLIEAGADCVKVGIGPGSICTTRVVAGIGVPQITAIMDVAEVAKEYGIPVIADGGIR 343 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI K++ GA + + S F Sbjct: 344 YSGDITKALAAGADVVMIGSLFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRY 403 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + L M G + ++EL ++ Sbjct: 404 FQEDASKLVPEGVEGRVPYKGPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|226939647|ref|YP_002794720.1| glutamate synthase subunit alpha [Laribacter hongkongensis HLHK9] gi|226714573|gb|ACO73711.1| GltB [Laribacter hongkongensis HLHK9] Length = 1520 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 56/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + G+ Sbjct: 1040 VSVKLVAEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSV-----KYAGTPWELGLT 1094 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A + GGL+ G+D++K+ ILGA G P + Sbjct: 1095 EAQQVLRANGLRGRVRMQTDGGLKTGLDVIKAAILGAESFGFGTGPMIALGCKFLRICHL 1154 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + V+ + +E M LG + + EL LI Sbjct: 1155 NNCATGVATQEVKLRSKHFIGLPEMVMNYFTFVAQETREWMAKLGVRSMDELIGRLDLIE 1214 >gi|324324568|gb|ADY19828.1| glutamate synthase, large subunit, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1478 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + ++ + A Sbjct: 999 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|226329302|ref|ZP_03804820.1| hypothetical protein PROPEN_03207 [Proteus penneri ATCC 35198] gi|225202488|gb|EEG84842.1| hypothetical protein PROPEN_03207 [Proteus penneri ATCC 35198] Length = 850 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 36/180 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + S + G+ Sbjct: 359 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLTSVKYAGSP-----WELGLV 413 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 414 ETQQALVANDLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 473 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGT-KRVQELYLNTALI 334 + V+ + +E M LLG K++ +L T L+ Sbjct: 474 NNCAMGVATQDETLRRNHYHGLPERVINYFRFIAQETRELMALLGVRKKITDLIGRTDLL 533 >gi|222529624|ref|YP_002573506.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii DSM 6725] gi|222456471|gb|ACM60733.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii DSM 6725] Length = 488 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 62/237 (26%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D ++ L A V +++ + G S ++ +AG + + E Sbjct: 229 KDTDDRVDALVKA-QVDVIVVDTAHGHSKGVIETVKRIKSRYPHIQVVAG----NIATAE 283 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ E IA GG+R Sbjct: 284 AARDLIEAGADCVKVGIGPGSICTTRVVAGIGVPQITAIMDVAEVAKEYGIPVIADGGIR 343 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI K++ GA + + S F Sbjct: 344 YSGDITKALAAGADVVMIGSLFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRY 403 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + L M G + ++EL ++ Sbjct: 404 FQEDASKLVPEGVEGRVPYKGPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|28897256|ref|NP_796861.1| glutamate synthase subunit alpha [Vibrio parahaemolyticus RIMD 2210633] gi|153838426|ref|ZP_01991093.1| glutamate synthase [NADPH] large chain [Vibrio parahaemolyticus AQ3810] gi|260366325|ref|ZP_05778777.1| glutamate synthase family protein [Vibrio parahaemolyticus K5030] gi|260876223|ref|ZP_05888578.1| glutamate synthase (NADPH), large subunit [Vibrio parahaemolyticus AN-5034] gi|260897177|ref|ZP_05905673.1| glutamate synthase [NADPH], large subunit [Vibrio parahaemolyticus Peru-466] gi|28805465|dbj|BAC58745.1| glutamate synthase, large subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748189|gb|EDM59048.1| glutamate synthase [NADPH] large chain [Vibrio parahaemolyticus AQ3810] gi|308087979|gb|EFO37674.1| glutamate synthase [NADPH], large subunit [Vibrio parahaemolyticus Peru-466] gi|308092926|gb|EFO42621.1| glutamate synthase (NADPH), large subunit [Vibrio parahaemolyticus AN-5034] gi|308114728|gb|EFO52268.1| glutamate synthase family protein [Vibrio parahaemolyticus K5030] Length = 1487 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 997 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 T +L +A ++ + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1053 TQQAL-VANGLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A + V+ L E + LG +++ +L T L+ Sbjct: 1112 NNCATGVATQDETLRKEYFKGLPEMVMNYFTGLADEVRELLAALGVEKLTDLIGRTDLLE 1171 >gi|213027635|ref|ZP_03342082.1| putative glycolate oxidase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 263 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 15/159 (9%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 65 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 118 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 119 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 177 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN-PLQEIIQPNGNTNF 168 Q GA + L ++ P+ + + NF Sbjct: 178 FILAQAVKH-----GAKAIILTVDSPVGGYREEDIKNNF 211 >gi|85705660|ref|ZP_01036757.1| glutamate synthase, large subunit [Roseovarius sp. 217] gi|85669650|gb|EAQ24514.1| glutamate synthase, large subunit [Roseovarius sp. 217] Length = 1513 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 +V + +K V K+ I+G G + + + + G Sbjct: 1025 NVKVCVKLVAQSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1080 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1081 LTEAHQVLSMNNLRERITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1140 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +++ VV I +E + +G + + + Sbjct: 1141 QSNTCPVGVCTQDEALRAKFTGNAEKVVNLITFYAQEVREILASIGARSLDD 1192 >gi|291276969|ref|YP_003516741.1| inosine-5'-monophosphate dehydrogenase [Helicobacter mustelae 12198] gi|290964163|emb|CBG40008.1| inosine-5'-monophosphate dehydrogenase [Helicobacter mustelae 12198] Length = 481 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 27/192 (14%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + R P+ + LG +++ GV + +A ++ A L L+ + + Sbjct: 200 QKRIAYPNANKDA-LGRLRVGAAIGVGQLDRAEGLVKAGVDVLVLDSA--------HGHS 250 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ + + + DV ++ VG ++ + + +G + G+ + Sbjct: 251 KNVIKTLEDIKKSFDVDVI---VGNVVTKKATQDLINAGADAVKVGIGPGSICTT----- 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P +++ + IA GG++ D+ K++ +GAS + Sbjct: 303 -------RIVAGVGMPQVSAIDNCVNVAQKYNIPIIADGGIKYSGDVAKALAVGASSV-M 354 Query: 287 ASPFLKPAMDSS 298 L +S Sbjct: 355 IGSLLAGTQESP 366 >gi|269928381|ref|YP_003320702.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus DSM 20745] gi|269787738|gb|ACZ39880.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus DSM 20745] Length = 511 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 18/140 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + +A + D+ ++ + G + +++G + G+ + Sbjct: 274 HSRGVIEMVAAIKRRWDIDVIAGNIATG---AAAQALIEAGADAVKVGVGPGSICTT--- 327 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLG 284 V G+P ++ +A GG++ DI K+I GA Sbjct: 328 ---------RVVAGIGVPQITAIMDVARVARAAGVPVVADGGIQYSGDIAKAIAAGADTV 378 Query: 285 GLASPFLKPAMDSSDAVVAA 304 + L +S V+ Sbjct: 379 -MLGSLLAGVDESPGEVILY 397 >gi|225555501|gb|EEH03793.1| glutamate synthase [Ajellomyces capsulatus G186AR] Length = 2101 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 39/219 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1046 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1105 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1106 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1160 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1161 LRTGRDVAMACLLGAEEWGFATTPLIAMGCVMMRKCHLNTCPVGIATQDPLLRQKFSGTP 1220 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V+ + E M LG + + E+ + T +R Q Sbjct: 1221 EHVINFFYYIANELRAIMAKLGIRTINEM-VATYNVRKQ 1258 >gi|91762429|ref|ZP_01264394.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1002] gi|91718231|gb|EAS84881.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 1501 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 33/196 (16%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DL+ I L A + +K V K+ I+G G + + Sbjct: 1000 DLAQLIYDLKQANPKARVGVKLVASSGIGTIAAGVAKAKADIILISGHNGGTGATP---- 1055 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + G+ + ++ GG++ G D++ + ++GA G+A+ Sbjct: 1056 QTSVKYVGIPWEMGLTEANQVLTLNNLRHKVTLRTDGGIKTGRDVVIAAMMGAEEYGVAT 1115 Query: 289 PFLKPA----------------------------MDSSDAVVAAIESLRKEFIVSMFLLG 320 L + + VV + + +E + +G Sbjct: 1116 TALVAMGCIMVRQCHSNTCPVGVCTQDEKLREKFSGTPEKVVNLFKFIAEEVREILAQIG 1175 Query: 321 TKRVQELYLNTALIRH 336 K + E+ T L+R Sbjct: 1176 FKSLNEIIGRTDLLRQ 1191 >gi|91217405|ref|ZP_01254365.1| glutamate synthase, large subunit [Psychroflexus torquis ATCC 700755] gi|91184513|gb|EAS70896.1| glutamate synthase, large subunit [Psychroflexus torquis ATCC 700755] Length = 1505 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + +K V K+ Sbjct: 982 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRAARINVKLVSQAGVGTVAAGVAKAN 1041 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 I+G GGT S + S R + + G+ + + A G Sbjct: 1042 ADVVLISGADGGTGASPLSSIRH-----AGLPWELGLSEAHQTLVKNNLRSRITVQADGQ 1096 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 +R G D+ + +LGA G+++ L K Sbjct: 1097 MRTGRDLAIATLLGAEEWGVSTAALIVEGCIMMRKCHTNTCPVGVATQNPELRKLFTGKP 1156 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV L ++ M LG K V ++ Sbjct: 1157 EHVVNYFNFLAEDLREIMAQLGFKSVSDM 1185 >gi|29374924|ref|NP_814077.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis V583] gi|255970900|ref|ZP_05421486.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T1] gi|256617266|ref|ZP_05474112.1| dihydroorotate dehydrogenase A [Enterococcus faecalis ATCC 4200] gi|256761269|ref|ZP_05501849.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T3] gi|256852322|ref|ZP_05557698.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis T8] gi|256963115|ref|ZP_05567286.1| dihydroorotate dehydrogenase A [Enterococcus faecalis HIP11704] gi|257080757|ref|ZP_05575118.1| dihydroorotate dehydrogenase A [Enterococcus faecalis E1Sol] gi|257085703|ref|ZP_05580064.1| dihydroorotate dehydrogenase A [Enterococcus faecalis D6] gi|257088795|ref|ZP_05583156.1| dihydroorotate dehydrogenase A [Enterococcus faecalis CH188] gi|257415076|ref|ZP_05592070.1| dihydroorotate dehydrogenase A [Enterococcus faecalis AR01/DG] gi|257418123|ref|ZP_05595117.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis T11] gi|257420628|ref|ZP_05597618.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis X98] gi|300862099|ref|ZP_07108179.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TUSoD Ef11] gi|30173230|sp|P59626|PYRDA_ENTFA RecName: Full=Dihydroorotate dehydrogenase A; AltName: Full=DHOdehase A; Short=DHOD A; Short=DHODase A; AltName: Full=Dihydroorotate oxidase A gi|29342382|gb|AAO80148.1| dihydroorotate dehydrogenase [Enterococcus faecalis V583] gi|255961918|gb|EET94394.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T1] gi|256596793|gb|EEU15969.1| dihydroorotate dehydrogenase A [Enterococcus faecalis ATCC 4200] gi|256682520|gb|EEU22215.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T3] gi|256712176|gb|EEU27208.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis T8] gi|256953611|gb|EEU70243.1| dihydroorotate dehydrogenase A [Enterococcus faecalis HIP11704] gi|256988787|gb|EEU76089.1| dihydroorotate dehydrogenase A [Enterococcus faecalis E1Sol] gi|256993733|gb|EEU81035.1| dihydroorotate dehydrogenase A [Enterococcus faecalis D6] gi|256997607|gb|EEU84127.1| dihydroorotate dehydrogenase A [Enterococcus faecalis CH188] gi|257156904|gb|EEU86864.1| dihydroorotate dehydrogenase A [Enterococcus faecalis ARO1/DG] gi|257159951|gb|EEU89911.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis T11] gi|257162452|gb|EEU92412.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis X98] gi|300848624|gb|EFK76381.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TUSoD Ef11] gi|323479498|gb|ADX78937.1| dihydroorotate dehydrogenase family domain protein [Enterococcus faecalis 62] Length = 311 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 2 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 59 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 60 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 116 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 117 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 177 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 236 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 237 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 289 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 290 QEIMAAKGYESIEEFR 305 >gi|75762367|ref|ZP_00742242.1| GMP reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900584|ref|YP_002448995.1| guanosine monophosphate reductase [Bacillus cereus G9842] gi|228903939|ref|ZP_04068049.1| GMP reductase [Bacillus thuringiensis IBL 4222] gi|228968589|ref|ZP_04129574.1| GMP reductase [Bacillus thuringiensis serovar sotto str. T04001] gi|74490143|gb|EAO53484.1| GMP reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544528|gb|ACK96922.1| guanosine monophosphate reductase [Bacillus cereus G9842] gi|228791081|gb|EEM38698.1| GMP reductase [Bacillus thuringiensis serovar sotto str. T04001] gi|228855697|gb|EEN00247.1| GMP reductase [Bacillus thuringiensis IBL 4222] Length = 328 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 89/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAV--H 142 T +A + SF +R ++ S +G + Y+F Q A + + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAEQITPE 114 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + + ++ G + + Sbjct: 115 YITIDIAHGHSNA---------------VINMIQHIKKHLPESFVI--AGNVGTPEAVRE 157 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 158 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 206 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 ADGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIERDGKLYKE 254 >gi|224417653|ref|ZP_03655659.1| hypothetical protein HcanM9_00100 [Helicobacter canadensis MIT 98-5491] gi|253827005|ref|ZP_04869890.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141199|ref|ZP_07803392.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510411|gb|EES89070.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130230|gb|EFR47847.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 365 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 27/197 (13%) Query: 98 MFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 +S + + F+ R+ + L +N+ Y V+ A +A + G L N Sbjct: 76 FYSKESLFEIFKNARKICGNNPLGANVLYAINEYGRVVRDACEAGANMIITGAGLPTN-- 133 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG- 215 P +NF ++ + I ++SSA + +L K K + G Sbjct: 134 ----MPEFTSNFPNV-ALIPIVSSAKALKILCKRWEG---------RYKKIPDAVIVEGP 179 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG E E + + P LE ++ + E IA+GG+ + DI Sbjct: 180 LSGGHQGVSYEDCFKPEYQLESIV-------PEVLEESKKW-GEIPIIAAGGIWDRNDID 231 Query: 275 KSIILGASLGGLASPFL 291 K + LGAS + + FL Sbjct: 232 KIMALGASGVQMGTRFL 248 >gi|191637802|ref|YP_001986968.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus casei BL23] gi|226739791|sp|B3WCK9|GUAC_LACCB RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|190712104|emb|CAQ66110.1| GMP reductase (Guanosine 5-monophosphate oxidoreductase) (Guanosine monophosphate reductase) [Lactobacillus casei BL23] gi|327381868|gb|AEA53344.1| GMP reductase [Lactobacillus casei LC2W] gi|327385030|gb|AEA56504.1| GMP reductase [Lactobacillus casei BD-II] Length = 329 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 84/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D +I S EVD SV+F P++ M I+ LAI AE Sbjct: 10 YEDIQMIPNKCVVQSRKEVDTSVKFGPHTFKIPVV-------PANMQTIIDEPLAIWLAE 62 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + F +R LI+++ + +F +A A L Sbjct: 63 HDYF------YIMHRFQPERRMDF-VRDMKKRG-LIASISVGVKDDEFDFIEALAANE-L 113 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + ++ Q + I + + ++ G + + Sbjct: 114 TPDY--ITIDIAHGYAQV--------VIDMIQHIKHYLPNAFVI--AGNVGTPEAVRELE 161 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + ++ + IA Sbjct: 162 NAGADATKVGIGPGKVCLT-------KLKTGFGTGGWQL---AAVRWCAKAARK-PIIAD 210 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+RN DI KSI GA++ + S F Sbjct: 211 GGIRNNGDIAKSIRFGATMCMIGSLF 236 >gi|71083140|ref|YP_265859.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1062] gi|71062253|gb|AAZ21256.1| glutamate synthase large subunit [Candidatus Pelagibacter ubique HTCC1062] Length = 1501 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 33/196 (16%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 DL+ I L A + +K V K+ I+G G + + Sbjct: 1000 DLAQLIYDLKQANPKARVGVKLVASSGIGTIAAGVAKAKADIILISGHNGGTGATP---- 1055 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + + G+ + ++ GG++ G D++ + ++GA G+A+ Sbjct: 1056 QTSVKYVGIPWEMGLTEANQVLTLNNLRHKVTLRTDGGIKTGRDVVIAAMMGAEEYGVAT 1115 Query: 289 PFLKPA----------------------------MDSSDAVVAAIESLRKEFIVSMFLLG 320 L + + VV + + +E + +G Sbjct: 1116 TALVAMGCIMVRQCHSNTCPVGVCTQDEKLREKFSGTPEKVVNLFKFIAEEVREILAQIG 1175 Query: 321 TKRVQELYLNTALIRH 336 K + E+ T L+R Sbjct: 1176 FKSLNEIIGRTDLLRQ 1191 >gi|65317947|ref|ZP_00390906.1| COG0069: Glutamate synthase domain 2 [Bacillus anthracis str. A2012] Length = 1428 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 779 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 832 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 833 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 892 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 893 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 948 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 949 KAGADFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1003 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1004 DGGIRSVNDALKIMLLGANRIGFG 1027 >gi|254488796|ref|ZP_05102001.1| glutamate synthase domain family protein [Roseobacter sp. GAI101] gi|214045665|gb|EEB86303.1| glutamate synthase domain family protein [Roseobacter sp. GAI101] Length = 1510 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDQALRDKFTGNADKVVNLITFYATEVRELLAAIGARSLDD 1189 >gi|30248126|ref|NP_840196.1| guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein [Nitrosomonas europaea ATCC 19718] gi|30180011|emb|CAD84006.1| guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein [Nitrosomonas europaea ATCC 19718] Length = 487 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 23/143 (16%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + ++ V ++ + + G + G+ + Sbjct: 254 GVLDRVRWVKKKFPEIQVIAGNVA---TATAAKALVDHGADAVKVGIGPGSICTT----- 305 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGL 286 V G+P +++ IA GG+R DI K++ GAS Sbjct: 306 -------RVVAGVGVPQISAIDNVATALLGTGVPLIADGGIRYSGDIAKALAAGASSV-- 356 Query: 287 ASPFLKPAMDSSDAVVAAIESLR 309 L + ++ IE L+ Sbjct: 357 ---MLGGLLAGTEESPGEIELLK 376 >gi|325094811|gb|EGC48121.1| glutamate synthase [Ajellomyces capsulatus H88] Length = 2057 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 966 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1025 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1026 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1080 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1081 LRTGRDVAMACLLGAEEWGFATTPLIAMGCVMMRKCHLNTCPVGIATQDPLLRQKFSGTP 1140 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1141 EHVINFFYYIANELRAIMAKLGIRTINEMVGRADLLK 1177 >gi|323143707|ref|ZP_08078377.1| inosine-5'-monophosphate dehydrogenase [Succinatimonas hippei YIT 12066] gi|322416510|gb|EFY07174.1| inosine-5'-monophosphate dehydrogenase [Succinatimonas hippei YIT 12066] Length = 489 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 63/222 (28%), Gaps = 71/222 (31%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +IA + +P++ V ++ ++G + G+ + Sbjct: 257 GVLDRIASIRKQYPQLPIIGGNVA---TAEGAIALAEAGCSTVKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T ++ + + + +A GG+R DI K++ GA+ + Sbjct: 309 -------RIVTGCGVPQMTAVANAVEALKGTDIKVVADGGIRYSGDIAKALAAGANCVMV 361 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 S F K + + Sbjct: 362 GSMFAGTEEAPGEIEIYQGRSFKSYRGMGSLAAMAKGSADRYFQSSDNAADKLVPEGIEG 421 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA + + + +M L G + EL +R Sbjct: 422 RVAYKGSLRGIIHQQMGGLRSAMGLTGCATIDELRTKAKFVR 463 >gi|242242617|ref|ZP_04797062.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis W23144] gi|242233753|gb|EES36065.1| guanosine 5'-monophosphate oxidoreductase [Staphylococcus epidermidis W23144] Length = 325 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 84/280 (30%), Gaps = 44/280 (15%) Query: 26 FDDWHLIHR-ALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + E S E + SV+F + P++ M +N LA A Sbjct: 6 YEDIQLIPNKCIVE-SRSECNTSVKFGPRTFKLPVV-------PANMQTVMNEELAQWFA 57 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + + F + H L +++ +F + Sbjct: 58 ENDYF------YIMHRFNEENRIPF--IKKMHHEGLFASISVGVKENEFNF------IEK 103 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + L E I + ++ + + I + + ++ G + + Sbjct: 104 LASSSLIP------EYITIDIAHGHSNSVINMIKHIKKHLPNSFVI--AGNVGTPEGVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W LS I Sbjct: 156 LENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLSALNLCNKAARKPII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GGLR DI KSI GAS+ + S F + V Sbjct: 205 ADGGLRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVE 244 >gi|12056407|emb|CAC21204.1| glutamate synthase large subunit [Thermotoga maritima] Length = 308 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 90/257 (35%), Gaps = 34/257 (13%) Query: 46 PSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 E KL P++ ++M+ G+ + + +LA AA G + Sbjct: 65 LKTEIAPQLKLEVPVMFTAMSYGSISLNALL--SLARAARTIGTFFNTGEGGLPKELREF 122 Query: 105 IKSFELRQYAPHTVLIS---NLG-AVQLNYDFGVQKA-------HQAVHVL-GADGLFLH 152 + ++ + + + N G AV++ G + + + + + Sbjct: 123 KDNMIVQVASGRFGVSADYLNAGSAVEIKVGQGAKPGIGGHLPGEKVTEPISETRMIPVG 182 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSGIRY 210 + L + + DL I + A P+ +K + +++G Y Sbjct: 183 TDALSPAPHHDI-YSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGMVRAGADY 241 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE------AQFIAS 264 I G G + + + RD GIP ++ + E A + + Sbjct: 242 IVIDGIRGGTGAAPKVTRDH----------VGIPIEFAIAVVDQRLREEGIRHMASIVVA 291 Query: 265 GGLRNGVDILKSIILGA 281 GG+RN D++K+I LGA Sbjct: 292 GGIRNSADVIKAIALGA 308 >gi|154287110|ref|XP_001544350.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces capsulatus NAm1] gi|150407991|gb|EDN03532.1| ferredoxin-dependent glutamate synthase 1 [Ajellomyces capsulatus NAm1] Length = 1469 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 973 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAK 1032 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1033 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1087 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS- 298 LR G D+ + +LGA G A+ P L+ + Sbjct: 1088 LRTGRDVAMACLLGAEEWGFATTPLIAMGCVMMRKCHLNTCPVGIATQDPLLRQKFSGTP 1147 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1148 EHVINFFYYIANELRAIMAKLGIRTINEMVGRADLLK 1184 >gi|259502055|ref|ZP_05744957.1| GMP reductase [Lactobacillus antri DSM 16041] gi|259169968|gb|EEW54463.1| GMP reductase [Lactobacillus antri DSM 16041] Length = 326 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 107/347 (30%), Gaps = 76/347 (21%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD LI S E D SV+F + + P++ M I+ +LA+ Sbjct: 8 YDDIQLIPNKCVIKSRKEADTSVQFGPRTFNIPVV-------PANMESVIDEDLAVW--- 57 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + +F R + ++G YDF + + V Sbjct: 58 --LAQNGYYYVMHRFQPADRLAFVQRMHERKLFASISVGIKDAEYDF-IDRLKAEQSVPE 114 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + +G+++F + I + + + G + + Sbjct: 115 YITIDV----------AHGHSDF--VIKMIQYIKRQLPTSFVT--AGNVATPEAVRDLEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + ++ + + IA G Sbjct: 161 AGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AAIRLCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R+ DI KS+ GAS+ G AS K A + Sbjct: 210 GIRHNGDIAKSVRFGASMVMIGSMLAGHLESPGHIITIDGKQYKQYWGSASEVQKGAYRN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + ++++ ++ G + ++ L +I Sbjct: 270 VEGKQMLVPFRGSIKDTLREMQEDLQSAISYAGGRDLEALRKVDYVI 316 >gi|228469728|ref|ZP_04054696.1| dihydroorotate dehydrogenase 2 [Porphyromonas uenonis 60-3] gi|228308747|gb|EEK17473.1| dihydroorotate dehydrogenase 2 [Porphyromonas uenonis 60-3] Length = 327 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 109/321 (33%), Gaps = 54/321 (16%) Query: 44 VDPSVEFLGKKLSFPLLI--SSMTGGNNK--------MIERINRNL-----------AIA 82 VD + + G L P++ S +T + I ++L A A Sbjct: 2 VDLTSHYGGIALRNPIIAGSSGLTASLQQIKALAQAGAGAVILKSLFEEQIEATALQAEA 61 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 T + H K +L + A + I + +V + Q++ Sbjct: 62 EMATSYPEGLDYMLHYTRQHEVEKYLDLIREAKQAIDIPVIASVNCYRGGEWEAFAQSIQ 121 Query: 143 VLGADGLFLHL-----NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 GAD L L++ +P Q G+ +L ++ + +P++ K + Sbjct: 122 EAGADALELNVMRIETDPAQ-----RGSDLEQELVDLAISITRTVQIPVVFKISDRFTNI 176 Query: 198 M-DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY- 255 + + +KSG++ + SW D+ + + Q I T L Y Sbjct: 177 LYLAQELVKSGVKGLTCFNK---SWQT-----DINIETLEIVQGPVISTGHELYNTLKYT 228 Query: 256 ------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 + ASGG+ + ++KS+++GAS + + + + + Sbjct: 229 GLLTGKLPQLAVSASGGVMDYAGVVKSLLVGASSVQV----VSALYQHG---ASYLTKML 281 Query: 310 KEFIVSMFLLGTKRVQELYLN 330 +E M G + + E N Sbjct: 282 EELTQWMTQHGYRSIDEFRGN 302 >gi|194467474|ref|ZP_03073461.1| guanosine monophosphate reductase [Lactobacillus reuteri 100-23] gi|194454510|gb|EDX43407.1| guanosine monophosphate reductase [Lactobacillus reuteri 100-23] Length = 324 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 90/279 (32%), Gaps = 43/279 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD L+ S E D SV+F P++ M I+ +LAI A Sbjct: 6 YDDIQLVPNKCVIKSRKEADTSVKFGPHTFKIPVV-------PANMESVIDEDLAIWLAQ 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 M + +F ++ + S ++ + + + Sbjct: 59 NDYYYVM-------HRFNPETRAAF-VKMMHEKGLFASISVGIKDDEYKFIDQLKS--EQ 108 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 L + + + + +G+++F + I + + + G + + Sbjct: 109 LNPEYITIDV--------AHGHSDF--VIKMIQYIKEKLPDTFVT--AGNVATPEAVRDL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + + G W + ++ + IA Sbjct: 157 ENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQLS---AIRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 GG+R+ DI KS+ GAS+ + L ++S V+ Sbjct: 206 DGGIRHNGDIAKSVRFGASMV-MIGSMLAGHLESPGHVI 243 >gi|15839299|ref|NP_299987.1| glutamate synthase subunit alpha [Xylella fastidiosa 9a5c] gi|9107955|gb|AAF85507.1|AE004077_3 glutamate synthase, alpha subunit [Xylella fastidiosa 9a5c] Length = 1489 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V +K+G ++G GGT S I S R V + G+ Sbjct: 1008 VSVKLVSHVGVGTIAAGVVKAGADLITVSGHDGGTGASPISSIR-----YAGVPWELGVA 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 +A GGL+ G+D++K+ +LGA+ G +P + Sbjct: 1063 EVHQALVANDLRERTMLQTDGGLKTGLDVVKAALLGANSFGFGTAPMIVLGCKYLRICHL 1122 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V L +E + LG + ++ T L++ Sbjct: 1123 NNCATGVATQDERLRANHFTGLPERVENFFRLLAEEVRQWLSYLGAMSLDDIIGRTDLLQ 1182 Query: 336 H 336 Sbjct: 1183 Q 1183 >gi|15902716|ref|NP_358266.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae R6] gi|73621439|sp|Q8DQG9|PYRD_STRR6 RecName: Full=Dihydroorotate dehydrogenase; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gi|15458260|gb|AAK99476.1| Dihydroorotate dehydrogenase [Streptococcus pneumoniae R6] Length = 311 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSSG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDRITNELKAIMVEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|328721168|ref|XP_001948786.2| PREDICTED: putative glutamate synthase [NADPH]-like [Acyrthosiphon pisum] Length = 2080 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + + +K V + K Sbjct: 1023 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNGRISVKLVSEVGVGVVASGVAKGK 1082 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I++ + + G+ + + + A Sbjct: 1083 AEHIVISGHDGGTGASSWTGIKN--------AGLPWELGVAETHQVLVLNNLRSRVVVQA 1134 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFL----------------------------KPAM 295 G +R G D++ + +LGA GL++ L K Sbjct: 1135 DGQIRTGFDVIVAALLGADEIGLSTAPLIVLGCTMMRKCHLNTCPVGIATQDPVLRKKFA 1194 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + L ++ M LG + Q+L T L++ Sbjct: 1195 GKPEHVINYLFMLAEDVRKHMANLGVAKYQDLIGRTDLLK 1234 >gi|227523862|ref|ZP_03953911.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus hilgardii ATCC 8290] gi|227088966|gb|EEI24278.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus hilgardii ATCC 8290] Length = 323 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S + D S++F K P++ M IN +LAI AE Sbjct: 6 YEDIQLIPNKCIIKSRSDADTSIKFGPKTFKIPVV-------PANMETVINDDLAIWLAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + F +A ++G Y F + A Sbjct: 59 NGYF------YIMHRFQPEKREGFIEMMHAKDLYASISVGIKDDEYKFIDELAEHNNK-- 110 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + +G+++F + I + + L+ G + + Sbjct: 111 -PEYITIDV--------AHGHSDF--VIKMIHYIKEKLPDSFLI--AGNLGTPEAVREIE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G I G + + G W + +L + + IA Sbjct: 158 NAGADATKIGIGPGKACIT-------KRKTGFGTGGWQL---AALRLCSKAARK-PMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + L +S V++ Sbjct: 207 GGIRFNGDIAKSVRFGASMV-MIGSLLAGHEESPGNVIS 244 >gi|71892300|ref|YP_278034.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796406|gb|AAZ41157.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 489 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 51/200 (25%), Gaps = 68/200 (34%) Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSL 249 G ++ +KSG + G+ + + GIP T +S Sbjct: 276 GNVVTKEGALELVKSGASAVKVGIGPGSICTT------------RIVTGVGIPQITAISD 323 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLG------------------------- 284 IA GG+R DI K+I GA Sbjct: 324 VAEALKNTNVPVIADGGIRFSGDIAKAIAAGAHCVMIGSLLAGTEESPGDIEFYQGRSFK 383 Query: 285 ---GLAS-----------------PFL--KPAMDSSDA-------VVAAIESLRKEFIVS 315 G+ S P + K + + + I L Sbjct: 384 TYRGMGSLGAMSQGSADRYFQQQDPVITHKLVPEGIEGRVPYKGKLETIIHQLMGGLRSC 443 Query: 316 MFLLGTKRVQELYLNTALIR 335 M L G + +L + +R Sbjct: 444 MGLTGCVTINDLRTHARFVR 463 >gi|312951976|ref|ZP_07770861.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0102] gi|310630054|gb|EFQ13337.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0102] gi|315144009|gb|EFT88025.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX2141] gi|315153771|gb|EFT97787.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0031] gi|315156919|gb|EFU00936.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0043] gi|315158917|gb|EFU02934.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0312] gi|315170556|gb|EFU14573.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX1342] Length = 365 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 56 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 113 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 114 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 170 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 171 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 230 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 231 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 290 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 291 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 343 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 344 QEIMAAKGYESIEEFR 359 >gi|256959551|ref|ZP_05563722.1| dihydroorotate dehydrogenase A [Enterococcus faecalis Merz96] gi|256950047|gb|EEU66679.1| dihydroorotate dehydrogenase A [Enterococcus faecalis Merz96] Length = 311 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 2 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 59 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 60 FDT-PLGSINSMG--LPNLGIDYYLDYQIACQKEFPEELRFLSVSGMNYEENIAILKKVQ 116 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 117 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 177 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 236 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 237 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 289 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 290 QEIMAAKGYESIEEFR 305 >gi|228906271|ref|ZP_04070158.1| Glutamate synthase, large subunit [Bacillus thuringiensis IBL 200] gi|228853427|gb|EEM98197.1| Glutamate synthase, large subunit [Bacillus thuringiensis IBL 200] Length = 1478 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 FP +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 FPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|86139318|ref|ZP_01057887.1| glutamate synthase family protein [Roseobacter sp. MED193] gi|85823821|gb|EAQ44027.1| glutamate synthase family protein [Roseobacter sp. MED193] Length = 496 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 17/220 (7%) Query: 86 TKVAMAVGSQRVMFSDHNAIKS-FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +G+ + + S +LR+ A + + + G A + Sbjct: 190 CDIVFQIGTAKYGVRNAEGGFSDAKLREVAANPTVRMFELKLSQGAKPGKGGILPA-EKV 248 Query: 145 GADGLFLHLNPLQEI-IQPNGNTN---FADLSSKIALLSSAMDVPLLLKEVGCGLSSM-- 198 A+ + P E I PN + F DL + IA + P+ +K V + M Sbjct: 249 SAEIAAIRGIPEGEASISPNRHPEMKSFDDLLNMIAHVREVTGKPVGIKTVVGSEAVMRE 308 Query: 199 ---DIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 I ++ + I G GGT + + + + P +L Sbjct: 309 MFMVIASRPEAAPDFITIDGGEGGTGAAPMPLIDLVGMSVREAL-----PMVCNLRDEYG 363 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + + I+SG L N D+ ++ GA A F+ Sbjct: 364 FRDRIRLISSGKLVNPGDVAWALAAGADFVTTARGFMFSL 403 >gi|163742515|ref|ZP_02149901.1| glutamate synthase, large subunit [Phaeobacter gallaeciensis 2.10] gi|161384100|gb|EDQ08483.1| glutamate synthase, large subunit [Phaeobacter gallaeciensis 2.10] Length = 1510 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|222824158|ref|YP_002575732.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100] gi|222539380|gb|ACM64481.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100] Length = 483 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 69/196 (35%), Gaps = 27/196 (13%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P++ S G +++ GV + + ++ A+ + + + + + Sbjct: 202 RKEYPNSNKDS-YGRLRVAAAVGVGQLDRVRALVDAEVDVI--------VMDSAHGHSKG 252 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + + V +++ V S+ ++ ++G I G+ + Sbjct: 253 IIDTLKAIKAEFSVDVIVGNVA---SAKAVKDLCEAGADAIKIGIGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P +++ IA GG++ DI K+I GAS + Sbjct: 303 -----RIVSGVGVPQISAIDECAIEASKYGVPVIADGGIKYSGDIAKAIAAGASSV-MIG 356 Query: 289 PFLKPAMDSSDAVVAA 304 L +S + Sbjct: 357 SLLAGTDESPGELFTY 372 >gi|296489272|gb|DAA31385.1| dihydropyrimidine dehydrogenase [Bos taurus] Length = 1025 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 115/359 (32%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K + P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNR 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 648 NDW--MELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSG-----IRYFDIAG-----RGGTSWSRIESHRD 229 A+ +P K + I K G ++G GT W + R+ Sbjct: 700 QAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADGTPWPAV--GRE 757 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 + G G+ T + ++ E +A+GG+ + L+ + GAS Sbjct: 758 KRTTYG------GVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D + I+ ++L K ++EL + A HQ Sbjct: 812 VLQVC-----SAIQNQDFTI--IQDYCTGLKALLYL---KSIEELQDWDGQSPATKSHQ 860 >gi|312135397|ref|YP_004002735.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor owensensis OL] gi|311775448|gb|ADQ04935.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor owensensis OL] Length = 488 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 62/237 (26%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 D ++ L A V +++ + G S ++ +AG + + E Sbjct: 229 KDTDERVDALVKA-QVDVIVVDTAHGHSKGVIETVKRIKSRYPHIQVVAG----NIATAE 283 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ E IA GG+R Sbjct: 284 AARDLIEAGADCVKVGIGPGSICTTRVVAGIGVPQITAIMDVAKVAKEYGIPVIADGGIR 343 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI K++ GA + + S F Sbjct: 344 YSGDITKALAAGADVVMIGSLFAGCEESPGECEIYQGRRFKVYRGMGSLSAMKAGSKDRY 403 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + L M G + ++EL ++ Sbjct: 404 FQEDASKLVPEGVEGRVPYKGPLEDTVFQLIGGLKSGMGYCGARTIKELQQKAKFVK 460 >gi|311032352|ref|ZP_07710442.1| Glutamate synthase large subunit [Bacillus sp. m3-13] Length = 1489 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +I+SM+ G+ I R A AA+K + +G A Sbjct: 835 DLPFVIASMSFGSQNEIAF--RAYAEAADKLNMVSLNGEGGEIKDMLGKYPKTRGQQVAS 892 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + +L +G + G + + + A + ++I P Sbjct: 893 GRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 948 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ IA L +A D + +V + I + K+G I+G G Sbjct: 949 SNNHDIYSIEDLAQMIAELKTANDQAKVAVKVPVVPNIGTIAVGIAKAGADIITISGFDG 1008 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + N+ + A GG+++ +D +K + Sbjct: 1009 GTGAARIHALQYVGLPV-----EIGVKAAHNALIESGLRNKVEIWADGGIKSALDCMKVM 1063 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1064 LLGANRIGFG 1073 >gi|103487621|ref|YP_617182.1| glutamate synthase (ferredoxin) [Sphingopyxis alaskensis RB2256] gi|98977698|gb|ABF53849.1| glutamate synthase (NADPH) large subunit [Sphingopyxis alaskensis RB2256] Length = 1510 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ +AG GGT S S + Sbjct: 1021 KARVCVKLVSSAGIGTVAAGVAKAHADVILVAGNTGGTGASPQTSV-----KYAGTPWEM 1075 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + + + GGL+ G DI+ + ILGA G+ + L Sbjct: 1076 GLSEVNQVLTLNGLRHRIRLRTDGGLKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQ 1135 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S + V+ + + +E + LG + + E+ T L Sbjct: 1136 CHSNTCPVGVCTQDEKLRQKFTGSPEKVINLMTFIAEEVREILAKLGCRSLDEVIGRTEL 1195 Query: 334 IRH 336 +R Sbjct: 1196 LRQ 1198 >gi|310780035|ref|YP_003968367.1| glutamate synthase (NADH) large subunit [Ilyobacter polytropus DSM 2926] gi|309749358|gb|ADO84019.1| glutamate synthase (NADH) large subunit [Ilyobacter polytropus DSM 2926] Length = 1489 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGLSSMDIELGLKSGIRY 210 P ++I P + + + L+ +V + +K V K+ Sbjct: 976 PGIDLISPPPHHDIYSIEDLAQLIFDLKNVNPTSRISVKLVSEVGVGTVAAGVAKAHSDM 1035 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT S I S + + G+ + + + A G ++ Sbjct: 1036 ILISGYDGGTGASPISSI-----KHAGLPWELGLSEAHQVLILNDLRGRVRIQADGQMKT 1090 Query: 270 GVDILKSIILGASLGGLASPFL----------------------------KPAMDSSDAV 301 G DI+ + +LGA G A+ L K M S+ + Sbjct: 1091 GRDIVIAALLGAEEFGFATAPLVVLGCIMMRACHTNMCPVGVATQSPELRKKFMGRSEYL 1150 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + ++ M LG K + E+ T LI Sbjct: 1151 INFFRFIAQDVREIMAELGFKNIDEMIGRTDLIE 1184 >gi|300724944|ref|YP_003714269.1| glutamate synthase large subunit [Xenorhabdus nematophila ATCC 19061] gi|297631486|emb|CBJ92193.1| glutamate synthase, large subunit [Xenorhabdus nematophila ATCC 19061] Length = 1485 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 59/179 (32%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF------------- 290 +A ++ + GGL+ GVDI+K+ ILGA G P Sbjct: 1050 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 291 -------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 L+ + + V+ + +E M LG K + +L T L+ Sbjct: 1110 NNCATGVATQDEKLRRSHYHGLPERVINYFHFIAQETRELMAQLGVKTLTDLIGRTDLL 1168 >gi|148553581|ref|YP_001261163.1| glutamate synthase (NADPH) large subunit [Sphingomonas wittichii RW1] gi|148498771|gb|ABQ67025.1| glutamate synthase (NADPH) large subunit [Sphingomonas wittichii RW1] Length = 1509 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 34/181 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+ +AG GGT S S + G+ Sbjct: 1022 RVCVKLVSSAGIGTVAAGVAKAHADVILVAGHVGGTGASPQTSV-----KYAGTPWEMGL 1076 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------ 291 + + + GGL+ G DI+ + ILGA G+ + L Sbjct: 1077 SETNQVLTLNGLRHRVKLRTDGGLKTGRDIVVAAILGAEEFGIGTLSLVAMGCIMVRQCH 1136 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + V+ + + +E + LG + + E+ T L+R Sbjct: 1137 SNTCPVGVCTQDEALRKKFVGTPEKVINLMTFIAEEVREILAKLGVRSLDEIIGRTELLR 1196 Query: 336 H 336 Sbjct: 1197 Q 1197 >gi|332527178|ref|ZP_08403251.1| inosine-5'-monophosphate dehydrogenase [Rubrivivax benzoatilyticus JA2] gi|332111602|gb|EGJ11584.1| inosine-5'-monophosphate dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 490 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 73/235 (31%), Gaps = 63/235 (26%) Query: 108 FELRQYAPHTVLIS-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 FE R AP +++ V + + + +A +H + + + + E + G Sbjct: 139 FETRLDAPVREVMTPRERLVWVGEEASLDEAKALMHRHKLERVLV----VNEAFELRGLM 194 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGL-----------SSMDIELGLKSGIRYFDIAG 215 D ++ D P ++ L + +EL +K+G+ + Sbjct: 195 TVKD-------ITKQTDFPNAARDSHGKLRVGAAVGVGEGTEERVELLVKAGVDALVVDT 247 Query: 216 RGGTSWSRIESHRDLESDIGI--------------------------------------V 237 G S IE R ++ + + Sbjct: 248 AHGHSAGVIERVRWVKKNFPQVDVIGGNIATGAAALALVEAGADAVKVGIGPGSICTTRI 307 Query: 238 FQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 G+P +++ + IA GG+R DI K+I GAS + F Sbjct: 308 IAGVGVPQITAIDNVATALRGSGVPLIADGGIRYSGDIAKAIAAGASTVMMGGMF 362 >gi|304385706|ref|ZP_07368050.1| inosine-5-monophosphate dehydrogenase [Pediococcus acidilactici DSM 20284] gi|304328210|gb|EFL95432.1| inosine-5-monophosphate dehydrogenase [Pediococcus acidilactici DSM 20284] Length = 380 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 51/288 (17%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +E D + + KL+ P++ + M + Sbjct: 15 FDDVLLIPGESHVLP----NEADITTQLADNLKLNIPIISAGMDTVTESAMGI------A 64 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN------LGAVQLNYDFGVQ 135 A + + + + K + L A + Sbjct: 65 MARQGGLGVIHKNMSADQQAAEVRKVKAADVDFDDNPKAAVDDQDRLLIAAAVGVTSDTF 124 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 + +A+ G D + + + + A + KIA + L+ G Sbjct: 125 ERAEALIEAGVDAIVI----------DTAHGHSAGVLRKIAEIREHFPDQTLI--AGNVA 172 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ ++G+ + G+ + V G+P ++ A Sbjct: 173 TAEGTRALFEAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAAGV 220 Query: 256 CNEA--QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 E Q IA GG++ DI+K+++ G + L + +D Sbjct: 221 AREYGKQIIADGGIKFSGDIVKALVAGGNAV-----MLGSMLSGTDET 263 >gi|319654240|ref|ZP_08008329.1| glutamate synthase [Bacillus sp. 2_A_57_CT2] gi|317394174|gb|EFV74923.1| glutamate synthase [Bacillus sp. 2_A_57_CT2] Length = 1504 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 31/261 (11%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGS 94 D S+ L P +ISSM+ G+ R A A++ + +G Sbjct: 841 DISLHVGEHDL--PFVISSMSFGSQNETAF--RAYAEGADRLNMVSLNGEGGEIKDMLGK 896 Query: 95 QRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFL 151 A F + +L +G + G + + + A + Sbjct: 897 YPRTRGQQVASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI 956 Query: 152 HLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSG 207 ++I P+ N + DL+ I L +A D + +V + I + K+G Sbjct: 957 ----GSDLISPSNNHDIYSIEDLAQMIHELKTANDKAKVAVKVPVVPNIGTIAVGIAKAG 1012 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 ++G GGT +RI + + + + + G+ + + + + A GG Sbjct: 1013 ADIITLSGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGIRDNVELWADGG 1067 Query: 267 LRNGVDILKSIILGASLGGLA 287 +++ D+LK ++LGA+ G Sbjct: 1068 IKSAADVLKVMLLGANRVGFG 1088 >gi|126730871|ref|ZP_01746680.1| glutamate synthase, large subunit [Sagittula stellata E-37] gi|126708587|gb|EBA07644.1| glutamate synthase, large subunit [Sagittula stellata E-37] Length = 1514 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1025 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1080 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1081 LSEAHQVLAMNNLRSRVTLRTDGGLRTGRDIVMAAMMGAEEFGIGTAALIAMGCIMVRQC 1140 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + E Sbjct: 1141 QSNTCPVGVCTQDPALRDKFTGNADKVVNLISFYATEVREILAGIGARSLSE 1192 >gi|169829003|ref|YP_001699161.1| 2-nitropropane dioxygenase [Lysinibacillus sphaericus C3-41] gi|168993491|gb|ACA41031.1| 2-nitropropane dioxygenase [Lysinibacillus sphaericus C3-41] Length = 335 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 90/255 (35%), Gaps = 48/255 (18%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQY 113 P++ + M G + +A + + +GS + D K F E+++ Sbjct: 9 QHPIIQAPMAGVTSP-------KFVVACTEAGL---LGSIGAGYLDGEQTKQFIQEVKKL 58 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD--- 170 + NL VQ ++ +A L L L+P+Q ++ FA Sbjct: 59 TTKPFAV-NLF-VQEEPQIDIEVLQKARMALQPFYDELGLSPVQSVVSKE---VFAGQVQ 113 Query: 171 -LSSKIALLSS-AMDVP---LL--LKE-----VGCGLSSMDIELGLKSGIRYFDIAG--R 216 + + + S +P +L LKE +G + + +L ++G+ + G Sbjct: 114 AVIEEKVKICSFTFGIPSAEVLKQLKEHGVYTIGTATTLEEAQLVEQAGMDAVVLQGGEA 173 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKS 276 GG HR + + IP L IA+GGL DI K+ Sbjct: 174 GG--------HRGSFTAPLQL-----IP-LYDLLQQVAGKIAIPIIAAGGLVTKKDIQKA 219 Query: 277 IILGASLGGLASPFL 291 + GA + + L Sbjct: 220 LESGAQAVQVGTALL 234 >gi|71065915|ref|YP_264642.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter arcticus 273-4] gi|93005833|ref|YP_580270.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter cryohalolentis K5] gi|71038900|gb|AAZ19208.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter arcticus 273-4] gi|92393511|gb|ABE74786.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter cryohalolentis K5] Length = 490 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 22/145 (15%) Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + K++ + V ++ + G + +G + G+ + Sbjct: 254 HSKGVIDKVSWIKKHFPHVQVIGGNIATG---DAAKALRDAGADAVKVGIGPGSICTT-- 308 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + G+P +++ +A + IA GG+R D+ K+I GAS Sbjct: 309 ----------RIIAGIGVPQISAIDSVASALQDSIPLIADGGIRYSGDMAKAIAAGASCI 358 Query: 285 GLASPFLKPAMDSSDAVVAAIESLR 309 + M ++ +E + Sbjct: 359 -----MVGSLMAGTEEAPGEVELFQ 378 >gi|27362942|gb|AAN86975.1| carotenoid biosynthetic ErwcrtS-like protein [Sulfolobus shibatae B12] Length = 72 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%) Query: 289 PFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 P LK A++ +++ + E +M L G+K V L + +I Sbjct: 2 PVLKSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVI 47 >gi|186685640|ref|YP_001868836.1| inosine 5-monophosphate dehydrogenase [Nostoc punctiforme PCC 73102] gi|186468092|gb|ACC83893.1| IMP dehydrogenase family protein [Nostoc punctiforme PCC 73102] Length = 387 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 78/256 (30%), Gaps = 68/256 (26%) Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK-IALLSSAMD 183 A G K +AV GAD F+ Q + + + + +A +M Sbjct: 133 AAVSATPAGASKYGEAVAKAGADLFFV-----QATVVSTAHLSPESVIPLDLAEFCRSMP 187 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESHRDLESD 233 +P++L G ++ LK+G + G G G + + D + Sbjct: 188 IPVVL---GNCVTYDVTLNLLKAGAAGVLVGIGPGAACTSRGVLGVGVPQATAIADCAAA 244 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 +++ G N IA GGL G DI K I GA + SPF + Sbjct: 245 RDDYYKETG--------------NYIPIIADGGLITGGDICKCIACGADGVMIGSPFARA 290 Query: 294 A-----------------------------------MDSSDAVVAAIESLRKEFIVSMFL 318 A + + +L SM Sbjct: 291 AEAPGRGYHWGMATPSPVLPRGTRIRVATTGSLEQILIGPAGLDDGTHNLLGALKTSMGT 350 Query: 319 LGTKRVQELYLNTALI 334 LG K ++E+ +I Sbjct: 351 LGAKNIKEMQQVEVVI 366 >gi|332141956|ref|YP_004427694.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551978|gb|AEA98696.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] Length = 489 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 19/136 (13%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + D+ ++ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRADFPDIQIIAGNVATG---DGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K++ GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVEALKDTDIPVIADGGIRFSGDIAKALAAGASCV-M 359 Query: 287 ASPFLKPAMDSSDAVV 302 L +S V Sbjct: 360 VGSMLAGTEESPGEVE 375 >gi|227551498|ref|ZP_03981547.1| dihydroorotate oxidase [Enterococcus faecium TX1330] gi|257895892|ref|ZP_05675545.1| dihydroorotate dehydrogenase [Enterococcus faecium Com12] gi|227179358|gb|EEI60330.1| dihydroorotate oxidase [Enterococcus faecium TX1330] gi|257832457|gb|EEV58878.1| dihydroorotate dehydrogenase [Enterococcus faecium Com12] Length = 314 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 86/325 (26%), Gaps = 60/325 (18%) Query: 45 DPSVEFLGKKLSFPLLISS----MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 F + P + +S MT + L A A S + Sbjct: 2 SLETTFANHTFANPFMNASGVHCMT----------TQELDELAHSEAGAFITKSCTINER 51 Query: 101 D--------------------HNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAH 138 N S+ L N VQ+ Sbjct: 52 KGNPEPRYFDVPLGSINSMGLPNLGFSYYLEYALAYEKAQKKPNQPLFFSIAGMSVQENL 111 Query: 139 QAVHVLGADGL----FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---V 191 + + + GL L+L+ +P +F + + S PL +K Sbjct: 112 EMLGEIEKSGLKGITELNLSCPNVPGKPQLAYDFETTYETLKEVFSIFSKPLGIKLPPYF 171 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTPL 247 ++ + + Y + G + F G PT Sbjct: 172 DFAHFDQMADILNQFPLTYVNAINSVGNGLYIDTDKEAVVIKPKEGFGGIGGEYIKPTA- 230 Query: 248 SLEMARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 L R + E Q I +GG+R G D + ++ GAS+ + + K + + Sbjct: 231 -LANVRAFYTRLKPEIQIIGTGGIRTGQDAFEHLLCGASMLQIGTELHK---EGPE---- 282 Query: 304 AIESLRKEFIVSMFLLGTKRVQELY 328 + KE M G + E Sbjct: 283 IFSRIIKELTQIMSEKGYTSIDEFK 307 >gi|223043145|ref|ZP_03613192.1| guanosine monophosphate reductase [Staphylococcus capitis SK14] gi|222443356|gb|EEE49454.1| guanosine monophosphate reductase [Staphylococcus capitis SK14] Length = 325 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 42/287 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D S++F + P++ M +N LA A+ Sbjct: 6 YEDIQLIPNKCIVNSRSECDTSIKFGPRTFKLPVV-------PANMQTVMNEELAQWFAQ 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + D A F + L +++ +F + + L Sbjct: 59 NDYF------YIMHRFDEEARIPF--IKKMQDEGLFASISVGVKENEF------KFIEEL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + L + E I + +D + + I + + + ++ G + + Sbjct: 105 ASKSL------VPEYITIDIAHGHSDSVINMIKHIKNHIPKSFVI--AGNVGTPEGVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W L+ IA Sbjct: 157 ENAGADATKVGIGPGRVCIT-------KIKTGFGTGGW----QLAALNICSKAARKPIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GGLR DI KSI GAS+ + S F V + ++ Sbjct: 206 DGGLRTHGDIAKSIRFGASMVMIGSLFAAHEESPGKTVELEGKKYKE 252 >gi|325570615|ref|ZP_08146341.1| GMP reductase [Enterococcus casseliflavus ATCC 12755] gi|325156461|gb|EGC68641.1| GMP reductase [Enterococcus casseliflavus ATCC 12755] Length = 328 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 44/281 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V G P++ M I+ ++A + Sbjct: 9 YEDIQLIPNKCIVNSRSECDTTVTLGGHSFKMPVV-------PANMQTIIDDSIAEFLAE 61 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ---AVH 142 + D A F +++ ++ S V+ N V++ + Sbjct: 62 NG-----YFYIMHRFDEEARIPF-IKKMKSRGLISSISVGVKENEYAFVEELAEKELVPD 115 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + + ++ G + + Sbjct: 116 FITIDIAHGHSNA---------------VINMIQHIKKHLPATFVI--AGNVGTPEAVRE 158 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L + I Sbjct: 159 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PII 207 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R DI KS+ GA++ + S F + V Sbjct: 208 ADGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 248 >gi|282897040|ref|ZP_06305042.1| IMP dehydrogenase [Raphidiopsis brookii D9] gi|281197692|gb|EFA72586.1| IMP dehydrogenase [Raphidiopsis brookii D9] Length = 387 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 56/202 (27%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------GTSWSRIESH 227 + +M +P++L G ++ +K+G + G G G + Sbjct: 179 LVEFCRSMPIPVIL---GNCVTYEVTLNLMKAGAAAVLVGIGPGAACTSRGVLGVGVPQA 235 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 +D +D+ T IA GGL G DI K I GA + Sbjct: 236 -TAVADCAAAREDFYQET----------GKYVPIIADGGLITGGDICKCIACGADGVMIG 284 Query: 288 SPFLKPA-----------------------------------MDSSDAVVAAIESLRKEF 312 SPF + A + + +L Sbjct: 285 SPFARAAEAPGRGYHWGMATPSPVLPRGTRIRVGTTGTLEQILKGPAGLDDGTHNLLGAL 344 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 345 KTSMGTLGAKNLKEMQQVEVII 366 >gi|254779179|ref|YP_003057284.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori B38] gi|254001090|emb|CAX29039.1| GMP reductase (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase) [Helicobacter pylori B38] Length = 325 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 87/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINDSIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + +LI L L D+ Sbjct: 59 NGYFYIMHRFNGSARIPFVKKMKERQLISSISVGVKKEEYLLIEELAKQGLTPDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ---------------RIKTHLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|237653288|ref|YP_002889602.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T] gi|237624535|gb|ACR01225.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T] Length = 487 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 33/183 (18%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + + + +G + + A V ++ D H Sbjct: 210 KDEHGRLRVAAAIGVGAGTEERAERLADAGVDMIVVDTAHGH---------------SQG 254 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGRGGTSWSRIESHRD 229 + ++ + ++ VG +++ D + +G + G+ + Sbjct: 255 VLDRVGWVKKHFPH---IEVVGGNIATADAARALVDAGADGVKVGIGPGSICTT------ 305 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P +++ IA GG+R DI K+I GA + L Sbjct: 306 ------RIVAGVGVPQISAIDNVANALLGTGVPMIADGGIRFSGDIAKAIAAGADVVMLG 359 Query: 288 SPF 290 F Sbjct: 360 GLF 362 >gi|295693795|ref|YP_003602405.1| gmp reductase [Lactobacillus crispatus ST1] gi|295031901|emb|CBL51380.1| GMP reductase [Lactobacillus crispatus ST1] Length = 330 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 88/281 (31%), Gaps = 45/281 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD L+ S + D SV+F + P++ M I+ NLAI A Sbjct: 12 YDDIQLVPNKGIIKSRRDADTSVKFGNRTFKIPVV-------PANMESVIDDNLAIWLAQ 64 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M + F ++ + S +G YDF + Sbjct: 65 NDYYYVM-------HRFEPEKRIPF-IKMMHQKGLFASISVGIKDSEYDFIDELVK---E 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + + + + I + + L G + + Sbjct: 114 NLKPEYITIDV----------AHGHSVYVIKMIKYIKEKLPDSFLT--AGNIATPEAVRE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M ++ I Sbjct: 162 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRMCSKSASK-PLI 210 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R+ DI KSI GA++ + L +S V+ Sbjct: 211 ADGGIRHNGDIAKSIRFGATMV-MIGSMLAGHEESPGNVIK 250 >gi|293383335|ref|ZP_06629249.1| dihydroorotate oxidase [Enterococcus faecalis R712] gi|293388379|ref|ZP_06632889.1| dihydroorotate oxidase [Enterococcus faecalis S613] gi|312906350|ref|ZP_07765360.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis DAPTO 512] gi|312909698|ref|ZP_07768551.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis DAPTO 516] gi|291079285|gb|EFE16649.1| dihydroorotate oxidase [Enterococcus faecalis R712] gi|291082260|gb|EFE19223.1| dihydroorotate oxidase [Enterococcus faecalis S613] gi|310627626|gb|EFQ10909.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis DAPTO 512] gi|311289999|gb|EFQ68555.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis DAPTO 516] Length = 365 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 56 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 113 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 114 FDT-PLGSINSMG--LPNLGIDYYLDYQIACQKEFPEELRFLSVSGMNYEENIAILKKVQ 170 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 171 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 230 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 231 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 290 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 291 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 343 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 344 QEIMAAKGYESIEEFR 359 >gi|298208567|ref|YP_003716746.1| glutamate synthase [Croceibacter atlanticus HTCC2559] gi|83848490|gb|EAP86359.1| glutamate synthase [Croceibacter atlanticus HTCC2559] Length = 538 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 11/156 (7%) Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA---LLSSAMDVPLLLKEVGCGLS 196 A + H+ ++++ P ++ F + I +++A +P+ +K L Sbjct: 251 AAKITEEISEIRHVPLGKDVLSPPTHSAFEGVEGLINFVEDIATATGLPVGIKAAIGKLD 310 Query: 197 -SMDIELGLKS---GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 ++ +K+ G + + G G + + S +D + +G + Sbjct: 311 QWKELATLMKTTGKGPDFITVDGGEGGTGAAPPSF----ADHVALPWMFGFSELYRIFDE 366 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + C++ FI SG L K+ LG +A Sbjct: 367 QELCDQIVFIGSGKLGFPAQAAKAFSLGVDCINVAR 402 >gi|187250704|ref|YP_001875186.1| malate dehydrogenase [Elusimicrobium minutum Pei191] gi|186970864|gb|ACC97849.1| Malate dehydrogenase [Elusimicrobium minutum Pei191] Length = 486 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 64/462 (13%), Positives = 128/462 (27%), Gaps = 144/462 (31%) Query: 15 KDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMI 72 D + FDD L+ + E+ +V S K KL+ PL+ + M T +KM Sbjct: 1 MDNKFSKEALTFDDVLLVPQ-HSEVLPKDVKTSTHLTKKIKLNIPLMSAGMDTVTESKMA 59 Query: 73 ERINRN------------LAIAAEKTKV----------AMAVGSQRVMFSDHNAIKSFE- 109 I R A AAE +V ++ + ++ Sbjct: 60 IAIAREGGVGIIHKNMSITAQAAEVDRVKRSDNGVIYDPFSLRKDNTLAEAKELAAKYKI 119 Query: 110 --LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL-----HLNPLQEIIQP 162 + + LI + + ++ + + ++ D L L +EI++ Sbjct: 120 SGVPIINDNGKLIGIITNRDMRFE--TDNSVRIGDIMTKDNLVTAKIGTSLKEAKEILRG 177 Query: 163 NGNTNFADLSSK--------IALLSSAMDVPLLLKEVGC--------GLSSMD---IELG 203 + K I + ++ P K+ G++ ++ Sbjct: 178 KKIEKLPLVDDKFKLKGLITIKDIEKSILYPNSAKDAKGRLLAGAAVGVTKDMFARAQVL 237 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV-------------------------- 237 + + + I G S IE+ + + ++ + Sbjct: 238 IDANVDVIVIDTAHGHSQGVIEAVKKMRAEFPDLQIIAGNVATAAATEDLIKAGVDAVKV 297 Query: 238 ------------FQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 G+P ++ ++ IA GG++ DI K+I GAS+ Sbjct: 298 GIGPGAICTTRVIAGIGVPQITAIYDCALVASKYGVPVIADGGIKFSGDIAKAIAAGASV 357 Query: 284 GGLASPFL-------------------------------------------KPAMDSSD- 299 + S F K + + Sbjct: 358 CMMGSLFAGTNESPGENIIYNGRAFKTYRGMGSAGAMGSGSSDRYFQENSKKLVPEGVEG 417 Query: 300 ------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+ + L +M G K + EL ++ Sbjct: 418 RVPYKGALSDTVYQLIGGLKAAMGYCGVKTIDELREKGQFVK 459 >gi|237808917|ref|YP_002893357.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187] gi|237501178|gb|ACQ93771.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187] Length = 487 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 62/220 (28%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I ++ G ++ E + +G+ + G+ + Sbjct: 256 GVLDRIRDTRKEYPNLQIVG--GNVATAKGAEALVDAGVSAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T +S + IA GG+R DI KSI GASL + Sbjct: 308 ------RIVTGCGVPQITAISDAAGALEGSGIPVIADGGIRFSGDIAKSIAAGASLVMVG 361 Query: 288 SPFL---------------------------------------------KPAMDSSDAVV 302 S F K + + V Sbjct: 362 SMFAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRV 421 Query: 303 ---AAIESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 ++ + + +M L G+ +++L ++ Sbjct: 422 PYKGWLKEIIHQQMGGLRSAMGLTGSATIEDLRTKAEFVK 461 >gi|83647622|ref|YP_436057.1| inosine-5'-monophosphate dehydrogenase [Hahella chejuensis KCTC 2396] gi|83635665|gb|ABC31632.1| inosine-5'-monophosphate dehydrogenase [Hahella chejuensis KCTC 2396] Length = 489 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 19/141 (13%) Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + +++ + + V ++ + G +++G + G+ + Sbjct: 252 HSRGVLNRVRWVKTHFPEVQVIGGNIATG---EAALALVEAGADGVKVGIGPGSICTT-- 306 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 + G+P ++ + IA GG+R DI K+I GAS Sbjct: 307 ----------RIVAGIGVPQMSAIANVAAALKDSGVPLIADGGIRFSGDIAKAIAAGASS 356 Query: 284 GGLASPFLKPAMDSSDAVVAA 304 + L +S V Sbjct: 357 V-MVGGLLAGTDESPGEVELY 376 >gi|315127474|ref|YP_004069477.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp. SM9913] gi|315015988|gb|ADT69326.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp. SM9913] Length = 489 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 55/197 (27%), Gaps = 70/197 (35%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMAR 253 ++ +G+ + G+ + + G+P T +S + Sbjct: 280 TAEGAIALADAGVDAVKVGIGPGSICTT------------RIVTGCGVPQITAISDAVEG 327 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------------------- 291 + IA GG+R DI+K+++ GAS + L Sbjct: 328 LKGRDIPVIADGGIRFSGDIVKALVAGASCV-MVGSMLAGTEEAPGEVELYQGRYYKSYR 386 Query: 292 --------------------------KPAMDSSDAVVAA---IESLRKE----FIVSMFL 318 K + + VA I ++ + +M L Sbjct: 387 GMGSLGAMDQKEGSSDRYFQKSNQADKLVPEGIEGRVAYKGPIATIIHQQVGGLRSAMGL 446 Query: 319 LGTKRVQELYLNTALIR 335 G ++EL +R Sbjct: 447 TGCATIEELNTKPQFVR 463 >gi|118094317|ref|XP_426639.2| PREDICTED: similar to dihydropyrimidine dehydrogenase [Gallus gallus] Length = 1178 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 115/361 (31%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D VD SV G K P I+S T ++ MI R A + AV + Sbjct: 681 IDLVDISVLMAGLKFPNPFGIASATPATSSSMIRR--------AFEAGWGFAVTKTFSLD 732 Query: 100 SD-------------------HNAIKSF-------------------ELRQYAPHTVLIS 121 D SF EL+ P +LI+ Sbjct: 733 KDIVTNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTAAYWCKSITELKSDFPKQILIA 792 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADL 171 ++ D+ + + GAD L L+L+ + + P N Sbjct: 793 SIMCSYSKDDWT--ELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW 850 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSW 221 + A+ +P K ++I + + G ++G GT W Sbjct: 851 ------VRQAVQIPFFAKLTPNVTDIVNIAVAAQEGGADGVTATNTVSGLMGLKADGTPW 904 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + L + G V + P L ++ +A+GG+ + L+ + G Sbjct: 905 PAVGA--GLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSG 962 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V I+ ++L K ++EL + +RH Sbjct: 963 ASVLQVC-----SAIQNQDFTV--IDDYCTGLRALLYL---KSIEELEDWNGQSPTTMRH 1012 Query: 337 Q 337 Q Sbjct: 1013 Q 1013 >gi|307721018|ref|YP_003892158.1| ferredoxin-dependent glutamate synthase [Sulfurimonas autotrophica DSM 16294] gi|306979111|gb|ADN09146.1| ferredoxin-dependent glutamate synthase [Sulfurimonas autotrophica DSM 16294] Length = 575 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 66/234 (28%) Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSG--------- 207 ++I PN +AD + + + L K VG + D + + Sbjct: 337 KDIFSPNRFP-YADTTEHLLDFVEQLQE-LSQKPVGFKIVISDADSVNELASIIAQRKRE 394 Query: 208 ----IRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYC 256 + + +G GG++ + +E + + G+ TP +L Sbjct: 395 GRNIPDFITVDSGEGGSATAPLE-----------LMESVGLTTPNALYILDMMLKKHNLR 443 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPF---------------------LKPAM 295 + + IASG + D++ ++ +GA G+A F + A Sbjct: 444 DNIKIIASGKILTPDDVIITMCMGADAVGIARGFMMSGGCIRARMCSGFGTHVCPVGMAT 503 Query: 296 DSSDA------VVAAIE------SLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 V IE +L K + ++G K + +L +++ Sbjct: 504 QDPKKRASYLVVKEGIEIGNYHKNLIKSIKTILAVMGVKSINDLNKRLLTFKNR 557 >gi|254516138|ref|ZP_05128198.1| glutamate synthase domain family protein [gamma proteobacterium NOR5-3] gi|219675860|gb|EED32226.1| glutamate synthase domain family protein [gamma proteobacterium NOR5-3] Length = 1441 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + G+ Sbjct: 956 VSVKLVSEPGVGTIAAGVTKAYADLITISGYDGGTAASPLTSIRHAGSP-----WELGLA 1010 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 + A GG++ G+D++K+ ILGA G + + Sbjct: 1011 EVQQTLRGNGLRGNVRLQADGGMKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1070 Query: 295 -------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + VV + +E + LG + ++EL T L+ Sbjct: 1071 NNCATGVATQNEQLRDDHFNGTVEMVVHFFTFVAQETREWLASLGVRSLEELIGRTDLLH 1130 Query: 336 H 336 Sbjct: 1131 R 1131 >gi|160903333|ref|YP_001568914.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95] gi|160360977|gb|ABX32591.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95] Length = 483 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 78/256 (30%) Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGC 193 + + ++ A F+ L+ + + ++ + + +P++ G Sbjct: 224 EGLQRTQELVDAGVDFVVLDSA--------HGHSKNIIETLKKIKERFPELPVIA---GN 272 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++ ++ ++SG + G+ + V G+P ++ Sbjct: 273 IATAEAAKMLIESGADAVKVGIGPGSICTT------------RVISGVGVPQLSAIMKVS 320 Query: 254 PYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL-------------------- 291 N+ IA GG+R DI+K++ GAS + S F Sbjct: 321 EEANKYNIPVIADGGIRYSGDIVKALAAGASTVMMGSIFAGTEEAPGETIIYQGRKFKTY 380 Query: 292 -------------------------KPAMDSSDAVVAA---IESLRKEF----IVSMFLL 319 K + +A+VA ++ + + M + Sbjct: 381 RGMGSIAAMEKGSKDRYFQESTPNEKLVPEGVEAMVAYKGEVKDVIIQLVGGVKAGMGYV 440 Query: 320 GTKRVQELYLNTALIR 335 G K ++EL I+ Sbjct: 441 GAKDIKELQQKAKFIK 456 >gi|332221979|ref|XP_003260142.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] isoform 1 [Nomascus leucogenys] Length = 1025 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 114/359 (31%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ ++ A ++ GAD L L+L+ + + P N + Sbjct: 648 NDW-MELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKR 759 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 760 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K ++EL + A + HQ Sbjct: 812 VLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSHQ 860 >gi|224418976|ref|ZP_03656982.1| inosine 5'-monophosphate dehydrogenase [Helicobacter canadensis MIT 98-5491] gi|253827924|ref|ZP_04870809.1| inosine-5-monophosphate dehydrogenase [Helicobacter canadensis MIT 98-5491] gi|313142488|ref|ZP_07804681.1| inosine-5'-monophosphate dehydrogenase [Helicobacter canadensis MIT 98-5491] gi|253511330|gb|EES89989.1| inosine-5-monophosphate dehydrogenase [Helicobacter canadensis MIT 98-5491] gi|313131519|gb|EFR49136.1| inosine-5'-monophosphate dehydrogenase [Helicobacter canadensis MIT 98-5491] Length = 483 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 42/266 (15%) Query: 43 EVDPSVEFLGKKLSFPLLISSMTGGNNKMIERI-NRNLAI---AAEKTKVAMAVGSQRVM 98 E D S PL +++ G + + I N++ + + + + + + Sbjct: 141 ETDLSRPVKEIMTKAPL-VTAKVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDI 199 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQE 158 S + + + +G Q YD V VL D H Sbjct: 200 QKRIEYPNS--NKDDFGRLRVGAAIGVFQ--YDRAKALVEAGVDVLVLDSAHGH------ 249 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + V ++ V + + +++G + G Sbjct: 250 ---------SRGILETVKEIKKHLVVDIVAGNVA---TKEGAQALIEAGADGVKVGIGPG 297 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKS 276 + + + G+P ++ C++ IA GG++ DI K+ Sbjct: 298 SICTT------------RIVAGVGVPQITAIADVSEVCHKMGIPLIADGGIKYSGDIAKA 345 Query: 277 IILGASLGGLASPFLKPAMDSSDAVV 302 + GAS + L +S + Sbjct: 346 LAAGASSV-MIGSMLAGTEESPGETI 370 >gi|195146274|ref|XP_002014112.1| GL24502 [Drosophila persimilis] gi|194103055|gb|EDW25098.1| GL24502 [Drosophila persimilis] Length = 363 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 110/335 (32%), Gaps = 75/335 (22%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQRVMFS 100 D+++ + +F G+ LS P+ I++ G +K E ++ + VG+ Sbjct: 32 DDINLNTQFFGRLLSNPIGIAA---GFDKNAEAVDGL-----KDLGFGFVEVGTVTPTAQ 83 Query: 101 DHN-----------------------------AIKSFELRQYAPHTVLISNLGAVQLNYD 131 + N S ++ + ++ NLG N Sbjct: 84 EGNPKPRVFRLSEDKAIINRYGFNSDGHEAVLQRLSESRKKENFNAIVGVNLG-RNRNTM 142 Query: 132 FGVQKAHQAVHVLG--ADGLFLHLNPL--QEIIQPNGNTNFADLSSKIALLSSAM----D 183 V Q V + G AD L ++++ + + +L ++ S + + Sbjct: 143 TPVADYVQGVRMFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNEARSRLESNRN 202 Query: 184 VPLLLK-----EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 VP+LLK E+ +D+ KS + +A RD D Sbjct: 203 VPILLKLSPDLEISDMSDIVDVIKRNKSRVDGLIVAN--------TTVSRDNLHDAKWTA 254 Query: 239 QDWGIP--------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+ T + +M + + I GG+ +G D + GAS + + Sbjct: 255 EAGGLSGEPLRARSTEMIAQMYQLTNGKVPIIGVGGVSSGYDAYQKFEAGASYVQIYTAL 314 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +E ++ E + G +Q Sbjct: 315 VYEGPY-------LVEQIKDELSKLITQRGHSNIQ 342 >gi|109011616|ref|XP_001106007.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Macaca mulatta] Length = 1025 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 114/359 (31%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ ++ A ++ GAD L L+L+ + + P N + Sbjct: 648 NDW-MELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKR 759 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 760 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K ++EL + A + HQ Sbjct: 812 VLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSHQ 860 >gi|296112718|ref|YP_003626656.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis RH4] gi|295920412|gb|ADG60763.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis RH4] gi|326560972|gb|EGE11337.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 7169] gi|326563792|gb|EGE14043.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 46P47B1] gi|326563961|gb|EGE14211.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 12P80B1] gi|326566805|gb|EGE16944.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 103P14B1] gi|326567355|gb|EGE17470.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC1] gi|326569871|gb|EGE19921.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC8] gi|326571523|gb|EGE21538.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC7] gi|326575196|gb|EGE25124.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis CO72] gi|326576718|gb|EGE26625.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 101P30B1] gi|326577607|gb|EGE27484.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis O35E] Length = 490 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 37/211 (17%) Query: 105 IKSFELRQYAPHTVLISN---LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + F + P+ S L + Q +A+ AD + + Sbjct: 199 VNDFSKAENNPNAAKDSKGHLLVGAAVGTGADTQARVEALIDAQADVIIV---------- 248 Query: 162 PNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGRGGT 219 + + + ++A + ++ ++ G +++ D L L G + G+ Sbjct: 249 DTAHGHSKGVIDRVAWIKKNYPNIQVI----GGNIATGDAALALLDVGADAVKVGIGPGS 304 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSII 278 + + G+P +++ +A + IA GG+R DI K+I Sbjct: 305 ICTT------------RIVAGIGVPQISAIDSVASALKDRIPLIADGGIRFSGDIAKAIA 352 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 GAS + + ++ +E + Sbjct: 353 AGASCI-----MVGSLLAGTEEAPGEVELFQ 378 >gi|222100218|ref|YP_002534786.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM 4359] gi|221572608|gb|ACM23420.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM 4359] Length = 487 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 56/205 (27%), Gaps = 67/205 (32%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D+P++ V + E +K+G + G+ + V G Sbjct: 271 DLPVVAGNVA---TPEGTEALIKAGADAVKVGVGPGSICTT------------RVVAGVG 315 Query: 243 IPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFL--------- 291 +P ++ + IA GG+R DI+K++ GA + S F Sbjct: 316 VPQLTAIMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGET 375 Query: 292 ----------------------------------KPAMDSSDA-------VVAAIESLRK 310 K + + V + L Sbjct: 376 ILYQGRKYKAYRGMGSLGAMKSGSADRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQLIG 435 Query: 311 EFIVSMFLLGTKRVQELYLNTALIR 335 M +G + ++EL IR Sbjct: 436 GLKSGMGYVGARTIKELQEKAVFIR 460 >gi|270307756|ref|YP_003329814.1| IMP dehydrogenase protein [Dehalococcoides sp. VS] gi|270153648|gb|ACZ61486.1| IMP dehydrogenase protein [Dehalococcoides sp. VS] Length = 381 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 107/377 (28%), Gaps = 85/377 (22%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM--------TGGNNKMI 72 R FD+ ++ L ++ ++V+ + + P + S+M +KM Sbjct: 10 RRTYGFDEVAIVPGGLT-VNPEQVEVDFKIGNINFAIPFIASAMDAVTNVDTAVAMSKMG 68 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM------------FSDHNAIKSFELRQYAPHTVLI 120 +L + + + Q + IK + + Sbjct: 69 GLSVLHLEGIYTRYENPQEILDQIISKPIDEVTAFMQKIYTAEPIKEHLIAKRVSEIKAK 128 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + AV L + A AV GAD + + + + + Sbjct: 129 GGICAVSLMPANAKKLAPVAVEA-GADIISV----ASTVTSARHVSKSSHGL-IFEEFVK 182 Query: 181 AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + VP+L VG +S +++G+ I G + + E Sbjct: 183 MIKVPVL---VGNCVSYQACLELMRTGVHGVIIGVGPGAACTSRE------------VLG 227 Query: 241 WGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G+P + I GG + G D+ K+I GA L SPF K Sbjct: 228 IGVPQITASMDCAAARETYYKETGRYVPIITDGGFKKGGDVCKAICAGADAVMLGSPFAK 287 Query: 293 PA-----------------------------------MDSSDAVVAAIESLRKEFIVSMF 317 A + +V ++L SM Sbjct: 288 AAEAPGRGYHWGMSHPHPSLPRGTRIKVGTTGSLEQILFGPTSVTDGTQNLVGALKTSMG 347 Query: 318 LLGTKRVQELYLNTALI 334 + G ++E+ +I Sbjct: 348 VCGASNIREMQQVEMVI 364 >gi|269103267|ref|ZP_06155964.1| inosine-5'-monophosphate dehydrogenase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163165|gb|EEZ41661.1| inosine-5'-monophosphate dehydrogenase [Photobacterium damselae subsp. damselae CIP 102761] Length = 454 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I ++P++ V ++ +++G+ + G+ + Sbjct: 223 GVLQRIRETHKQFPNLPIVGGNVA---TAEGARALIEAGVSAVKVGIGPGSICTT----- 274 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R D+ K+I GAS + Sbjct: 275 -------RIVTGVGVPQITAISEAASIADQYGIPVIADGGIRYSGDLCKAIAAGASCVMV 327 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 328 GSMFAGTEEAPGEVELYQGRAYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR 387 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + SM L G+ +++L +R Sbjct: 388 VAYKGHLKEIVHQQMGGLRSSMGLTGSATIEDLRTKAEFVR 428 >gi|114765549|ref|ZP_01444657.1| glutamate synthase, large subunit [Pelagibaca bermudensis HTCC2601] gi|114542142|gb|EAU45174.1| glutamate synthase, large subunit [Roseovarius sp. HTCC2601] Length = 1537 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1048 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1103 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1104 LTEAHQVLAMNKLRDRVTLRTDGGLRTGRDIVMAAMMGAEEFGIGTAALIAMGCIMVRQC 1163 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++D VV I E + +G + + ++ L+ Sbjct: 1164 QSNTCPVGVCTQDEELRGKFTGNADKVVNLITFYATEVREILASIGARSLNDVIGRADLL 1223 Query: 335 RH 336 R Sbjct: 1224 RQ 1225 >gi|332140457|ref|YP_004426195.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550479|gb|AEA97197.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str. 'Deep ecotype'] Length = 489 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 19/136 (13%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + D+ ++ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRADFPDIQIIAGNVATG---DGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K++ GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVEALKDTDIPVIADGGIRFSGDIAKALAAGASCV-M 359 Query: 287 ASPFLKPAMDSSDAVV 302 L +S V Sbjct: 360 VGSMLAGTEESPGEVE 375 >gi|19746385|ref|NP_607521.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS8232] gi|81847927|sp|Q8P0C0|PYRD_STRP8 RecName: Full=Dihydroorotate dehydrogenase; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gi|19748584|gb|AAL98020.1| putative dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS8232] Length = 311 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + + PL +K Sbjct: 110 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 169 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 170 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 227 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + L + A Sbjct: 228 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQI-GTVLH--QEGP----AI 280 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G +R+ + N Sbjct: 281 FERVTKELKTIMVEKGYQRLADFRGN 306 >gi|86136842|ref|ZP_01055420.1| glutamate synthase, large subunit [Roseobacter sp. MED193] gi|85826166|gb|EAQ46363.1| glutamate synthase, large subunit [Roseobacter sp. MED193] Length = 1510 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDD 1189 >gi|315028398|gb|EFT40330.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX4000] Length = 322 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMVAKGYESIEEFR 316 >gi|224586475|ref|YP_002640364.1| inosine-5'-monophosphate dehydrogenase [Borrelia valaisiana VS116] gi|224496968|gb|ACN52604.1| inosine-5'-monophosphate dehydrogenase [Borrelia valaisiana VS116] Length = 404 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 103/325 (31%), Gaps = 84/325 (25%) Query: 26 FDDWHLIHR---ALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI R LP EV + L+ P L S+M T ++M I Sbjct: 12 FDDVSLIPRKSSVLP----SEVSLKTKLTKNISLNIPFLSSAMDTVTESQMAIAIAIEGG 67 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 I M++ Q+ +K++++++ + +N GA Q Sbjct: 68 IGIIHKN--MSIEDQKKEIEK---VKTYKIQKT-----INTNKGAN-----------EQI 106 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 + +L P QE+ P N A+ + + + ++ L + + Sbjct: 107 IEILA---------PKQELEAPEIYKN-AEYAEDFSNVCKDLNGRLRV-GAAVSIDVDTT 155 Query: 200 --IELGLKSGIRYFDIAGRGGT-----------------------SWSRIESHRDLESDI 234 +E +K+ + I G + E+ DL + Sbjct: 156 ERVEELVKAHVDLLVIDSAHGHSTRILELVKTIKNKYPNLDLIAGNIVTKEAALDLINAG 215 Query: 235 GIVF---------------QDWGIPTPLSLEMARPYCNEAQF--IASGGLRNGVDILKSI 277 G+P ++ C IA GG+R D++K+I Sbjct: 216 ADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAI 275 Query: 278 ILGASLGGLASPFLKPAMDSSDAVV 302 GA + + F S+ ++ Sbjct: 276 AAGADSVMIGNLFAGAKESPSEEII 300 >gi|332533482|ref|ZP_08409345.1| ferredoxin-dependent glutamate synthase [Pseudoalteromonas haloplanktis ANT/505] gi|332037029|gb|EGI73487.1| ferredoxin-dependent glutamate synthase [Pseudoalteromonas haloplanktis ANT/505] Length = 488 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 93/297 (31%), Gaps = 44/297 (14%) Query: 29 WHLIHRALPEISFDEVDPSVEFLGKKLSFP------LLISSMTGGNNKMIERINRNLAIA 82 ++ A P + + +DPS LG P +S M+ G R L+ Sbjct: 105 VMFMNCAFPTLDEEALDPSNVTLGPYCKTPYTTNSLFNVSGMSFGALSKPAV--RALSKG 162 Query: 83 AEKTKVAM--AVGSQRVMFSDHNAIKSFELRQY-APHTVLISNLGAVQLNYDFGVQKAHQ 139 A+ M G + A F++ NL +L ++ Sbjct: 163 AKLAGCWMNTGEGGLSPYHLEGGADLVFQIGTAKYGARDEHGNLSTEKLKEIAAHEQVKM 222 Query: 140 -----------------AVHVLGADGLFLHLNP-LQEIIQPNGNT---NFADLSSKIALL 178 + A+ + P Q+ I PNG+ N AD+ IA + Sbjct: 223 FELKMSQGAKPGKGGMLPGRKVNAEIAKIRGIPEGQDSISPNGHPEIKNPADILDMIATV 282 Query: 179 SSAMDVPLLLKEVGCGLSSMDIELG------LKSGIRYFDI-AGRGGTSWSRIESHRDLE 231 +A P K V + ++ ++S + I + GGT + + Sbjct: 283 RNATGKPTGFKAVIGDYTWLETLFAEINHRGIESAPDFITIDSADGGTGAAPQPLMDSVG 342 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + P +++ + + IASG L + ++ LGA A Sbjct: 343 LPLRESL-----PLVVNMLEKHGLRDRVKIIASGKLIVPSKVAWALALGADFVVSAR 394 >gi|113952811|ref|YP_729619.1| ferredoxin-dependent glutamate synthase, Fd-GOGAT [Synechococcus sp. CC9311] gi|113880162|gb|ABI45120.1| Ferredoxin-dependent glutamate synthase, Fd-GOGAT [Synechococcus sp. CC9311] Length = 1560 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 36/185 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 P+ +K V K+ I+G GGT S + S + S + Sbjct: 1076 KAPVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSIKHAGSP-----WEL 1130 Query: 242 GIPTP-LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL--------- 291 G+ SL + A GGL+ G D++ + +LGA G S + Sbjct: 1131 GLTEVHRSLLE-NGLRDRVLLRADGGLKTGWDVVVAALLGAEEYGFGSVAMIAEGCIMAR 1189 Query: 292 --------------KPAMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 K A+ + VV + +E M +LG R+++L + Sbjct: 1190 VCHTNNCPVGVATQKAALRKRFTGVPEHVVNFFWYVAEEVRQLMSVLGVARLEDLIGRSD 1249 Query: 333 LIRHQ 337 L++ + Sbjct: 1250 LLQPR 1254 >gi|301608531|ref|XP_002933845.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Xenopus (Silurana) tropicalis] Length = 898 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 109/359 (30%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV-------- 92 D VD SVE +G K P ++S + I R A + A+ Sbjct: 401 IDLVDISVEMVGIKFPNPFGLASAPPTTS--APMIRR-----AFEAGWGFALTKTFSLEK 453 Query: 93 ------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLIS 121 G+ SF EL+ P +LI+ Sbjct: 454 DIVTNVSPRIIRGTTSGSIYGPGQ-GSFLNIELISEKTAAYWCQSITELKADFPKNILIA 512 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADL 171 ++ N D + A A GAD L L+L+ + + P N Sbjct: 513 SI-MCSYNKDDWTELALMA-EASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW 570 Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAGRGGTSWSRIES 226 + A+ +P K + I + + G ++G G Sbjct: 571 ------VRQAVKIPFFAKLTPNVTDVVKIAMAAQEGGADGVTATNTVSGLMGLKADATPW 624 Query: 227 H---RDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 R + G V + P L ++ +A+GG+ + L+ + GAS Sbjct: 625 PAVGRGSRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGAS 684 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K + EL + IRHQ Sbjct: 685 VLQVC-----SAVQNQDFTV--IEDYCTGLKALLYL---KSIDELQDWDGQSPPTIRHQ 733 >gi|262068351|gb|ACY07928.1| glycolate oxidase [Panax ginseng] Length = 183 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + N+ F R L I ++D + LG K+S P++I+ Sbjct: 29 AEDQWTLQENRNAFARILFRPRIL--IDVSKIDMTTTVLGFKISMPIMIAPTA 79 >gi|256851573|ref|ZP_05556962.1| guanosine monophosphate reductase [Lactobacillus jensenii 27-2-CHN] gi|260660996|ref|ZP_05861911.1| guanosine monophosphate reductase [Lactobacillus jensenii 115-3-CHN] gi|282932773|ref|ZP_06338178.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 208-1] gi|297206389|ref|ZP_06923784.1| inosine-5-monophosphate dehydrogenase [Lactobacillus jensenii JV-V16] gi|256616635|gb|EEU21823.1| guanosine monophosphate reductase [Lactobacillus jensenii 27-2-CHN] gi|260548718|gb|EEX24693.1| guanosine monophosphate reductase [Lactobacillus jensenii 115-3-CHN] gi|281303101|gb|EFA95298.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus jensenii 208-1] gi|297149515|gb|EFH29813.1| inosine-5-monophosphate dehydrogenase [Lactobacillus jensenii JV-V16] Length = 379 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 96/273 (35%), Gaps = 41/273 (15%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFLG-KKLSFPLLISSM-TGGNNKMIERINRNLA 80 FDD LI LP ++VD VE KL+ P + + M T ++M + + Sbjct: 15 FDDVLLIPAESHVLP----NDVDLKVELTSSLKLNLPFISAGMDTVTEHEMAIAMAQAGG 70 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + + + V + + S + H +L++ +A Sbjct: 71 LGVIHKNMTITNQANEVKLVKNTEVTSEKAAVDNEHRLLVA------AAVGVTTDTFERA 124 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMD 199 ++ A + ++ + + A + KI+ + + ++ L+ V ++ Sbjct: 125 SALIDAGANAIVIDTA--------HGHSAGVLRKISEIRAKFPNINLIAGNVA---TAAG 173 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA 259 +G+ + G+ + V G+P ++ A E Sbjct: 174 TRALYDAGVDVVKVGIGPGSICTT------------RVVAGVGVPQITAIYDAANVAREY 221 Query: 260 --QFIASGGLRNGVDILKSIILGASLGGLASPF 290 IA GG++ DI+K++ G + L S F Sbjct: 222 GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMF 254 >gi|255263099|ref|ZP_05342441.1| glutamate synthase [NADPH] large chain (nadph-gogat) [Thalassiobium sp. R2A62] gi|255105434|gb|EET48108.1| glutamate synthase [NADPH] large chain (nadph-gogat) [Thalassiobium sp. R2A62] Length = 1512 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1024 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1079 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL----------- 291 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1080 LTEAHQVLSMNNLRERITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1139 Query: 292 -----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 S+D VV I E + +G + + + Sbjct: 1140 QSNTCPVGVCTQDEALRHKFTGSADKVVNLITFYATEVREILAEIGARSLDD 1191 >gi|229014622|ref|ZP_04171736.1| GMP reductase [Bacillus mycoides DSM 2048] gi|229136281|ref|ZP_04265028.1| GMP reductase [Bacillus cereus BDRD-ST196] gi|228647153|gb|EEL03241.1| GMP reductase [Bacillus cereus BDRD-ST196] gi|228746633|gb|EEL96522.1| GMP reductase [Bacillus mycoides DSM 2048] Length = 330 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 10 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 57 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 58 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEKLS 114 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 115 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEN 162 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 163 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 211 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 212 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 256 >gi|89052742|ref|YP_508193.1| glutamate synthase (NADPH) large subunit [Jannaschia sp. CCS1] gi|88862291|gb|ABD53168.1| glutamate synthase (NADPH) large subunit [Jannaschia sp. CCS1] Length = 1511 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1023 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1078 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1079 LTEAHQVLAMNNLRERITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1138 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + E Sbjct: 1139 QSNTCPVGVCTQDEELRDKFTGNADKVVNLITFYAEEVREILASIGARSLDE 1190 >gi|120553766|ref|YP_958117.1| glutamate synthase subunit alpha [Marinobacter aquaeolei VT8] gi|120323615|gb|ABM17930.1| glutamate synthase (NADPH) large subunit [Marinobacter aquaeolei VT8] Length = 1482 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT+ S + S R S + G+ Sbjct: 996 VSVKLVSEPGVGTIAAGVAKAYADLITVSGYDGGTAASPLTSIRYAGSP-----WELGLT 1050 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 T +L A + + GG++ G+D++K+ ILGA G + + Sbjct: 1051 ETQQALR-ANDLRGKIRLQTDGGIKTGLDVVKAAILGAESFGFGTTPMVAL 1100 >gi|229547770|ref|ZP_04436495.1| dihydroorotate oxidase [Enterococcus faecalis TX1322] gi|229307114|gb|EEN73101.1| dihydroorotate oxidase [Enterococcus faecalis TX1322] Length = 322 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + + + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKELPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|164659788|ref|XP_001731018.1| hypothetical protein MGL_2017 [Malassezia globosa CBS 7966] gi|159104916|gb|EDP43804.1| hypothetical protein MGL_2017 [Malassezia globosa CBS 7966] Length = 2055 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 60/196 (30%), Gaps = 35/196 (17%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESH 227 DL I L S + +K V + K+ + I+G GGT + Sbjct: 970 DLKQLIYDLKCSNPRARVSVKLVSEVGVGVIASGVAKAKADHILISGHDGGTG-----AA 1024 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 R + + G+ + G LR G D+ + +LGA G + Sbjct: 1025 RWTSIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQLRTGRDVAIACLLGAEEYGFS 1084 Query: 288 S---------------------------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLL 319 + P L+ + V+ L +E M L Sbjct: 1085 TAPLISMGCIMMRKCHLNTCPVGIATQDPILREKFAGQPEHVINFFYYLSEELRSIMAKL 1144 Query: 320 GTKRVQELYLNTALIR 335 G + + E+ + L+R Sbjct: 1145 GLRTINEMVGRSDLLR 1160 >gi|152998110|ref|YP_001342945.1| glutamate synthase subunit alpha [Marinomonas sp. MWYL1] gi|150839034|gb|ABR73010.1| Glutamate synthase (ferredoxin) [Marinomonas sp. MWYL1] Length = 1461 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S I S R S + G+ Sbjct: 975 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPITSIRHAGSP-----WELGLA 1029 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLK---- 292 + + + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1030 EAQQALRSNDLRGKIRLQTDGGLKTGLDVVKAAILGAESFGFGTTPMVAMGCKFLRICHL 1089 Query: 293 -----------------PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + + ++ + + LG +Q+L T L+ Sbjct: 1090 NNCATGVATQDQMLRDEHFIGTVEMIKNFFRFMAEDTRLWLAKLGVASLQDLIGRTDLL 1148 >gi|119383240|ref|YP_914296.1| glutamate synthase (ferredoxin) [Paracoccus denitrificans PD1222] gi|119373007|gb|ABL68600.1| glutamate synthase (NADPH) large subunit [Paracoccus denitrificans PD1222] Length = 1516 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 32/169 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1029 ITVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKFAGLPWEMGLTE 1084 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1085 AHQVLAMNRLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1144 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 S+D VV I E + +G + + E Sbjct: 1145 TCPVGVCTQDEKLRAMFNGSADKVVNLITFYATEVREILASIGARSLDE 1193 >gi|254499273|ref|ZP_05111949.1| inosine-5-monophosphate dehydrogenase [Legionella drancourtii LLAP12] gi|254351517|gb|EET10376.1| inosine-5-monophosphate dehydrogenase [Legionella drancourtii LLAP12] Length = 490 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 65/223 (29%), Gaps = 72/223 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + DV ++ G ++ ++G + G+ + Sbjct: 256 GVIDRVRWIKKHYPDVQVIG---GNIATAAAARDLYEAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLG--- 284 + G+P ++ A+ + IA GG+R D+ K++ GA Sbjct: 308 -------RIVTGVGVPQISAIANVAQELKGKIPLIADGGIRFSGDVCKALAAGADTVMLG 360 Query: 285 -------------------------------------GLASPFLKPAMDSSDAVV----- 302 G + + + A S+ +V Sbjct: 361 SMFAGTEESPGEIELYQGTTYKSYRGMGSIGAMASAQGSSDRYFQDATLGSEKLVPEGIE 420 Query: 303 ------AAIESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 ++++ + M G + +++L+ T ++ Sbjct: 421 GRVPYKGLVQTIIHQILGGLRSCMGYTGCETIEQLHTKTEFVQ 463 >gi|192896487|gb|ACF06636.1| ToyE [Streptomyces rimosus] Length = 384 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 96/299 (32%), Gaps = 59/299 (19%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSMT--------------GGNN 69 DD L+ + S D S E + G +LS P+L S+ T G Sbjct: 12 GLDDVLLVPQRTSVTSRSHTDVSTELVPGLRLSVPIL-SANTPWCTGARMAAAMALAGGL 70 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 +I R+ AAE T V ++ + +A + + L A Sbjct: 71 GVIHRMQTAEDQAAEVTAV------KKEHPKEESAAPGATVDE-------RGRLRAAA-A 116 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLL 188 +A ++ A L ++ G+ ++ + + L S VPL+ Sbjct: 117 VGVTDDYLDRAALLVEAGADALVVDVAH------GHADY--VLKAVEQLKSRWPGVPLVG 168 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIA-GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 V + + +G + G GG +R + G+P Sbjct: 169 GNVA---TPAGTRDLIDAGADAVKVGIGPGGICTTR-------------LVAGSGMPQFT 212 Query: 248 SLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 ++ IA GG++ D+ K + GA + L A +S+ +V Sbjct: 213 AVLECAEEAAGRGVPVIADGGIKEPGDVAKVLAAGAR-TAMLGSALAGAEESAALLVEH 270 >gi|194398573|ref|YP_002037849.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus pneumoniae G54] gi|226739803|sp|B5E4Y3|GUAC_STRP4 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|194358240|gb|ACF56688.1| GMP reductase [Streptococcus pneumoniae G54] Length = 328 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 97/347 (27%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M ++ N+A Sbjct: 10 YEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVV-------PANMQTILDENVAE---- 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 ++A + D F R + + ++G YDF Q A + Sbjct: 59 -QLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + + S I + + ++ G + + Sbjct: 118 IDIAHGHAD---------------SVISMIQHIKKELPDTFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W L+ IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGW----QLAAXRWCAKAARKPIIADG 209 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 210 GIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKN 269 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ ++ G ++V +L +I Sbjct: 270 VEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVI 316 >gi|291398457|ref|XP_002715523.1| PREDICTED: dihydropyrimidine dehydrogenase [Oryctolagus cuniculus] Length = 1029 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 112/359 (31%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 532 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 591 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ PH ++I+++ Sbjct: 592 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPHNIVIASIMCSYNK 651 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 652 SDW--MELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 703 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ VP K + I + G ++G GT W + + Sbjct: 704 QAVQVPFFAKLTPNVTDIISIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGKR 763 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 764 TTYG--------GVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGAS 815 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K ++EL + A + HQ Sbjct: 816 VLQVC-----SAVQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSHQ 864 >gi|84500669|ref|ZP_00998918.1| glutamate synthase, large subunit [Oceanicola batsensis HTCC2597] gi|84391622|gb|EAQ03954.1| glutamate synthase, large subunit [Oceanicola batsensis HTCC2597] Length = 1512 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 50/171 (29%), Gaps = 32/171 (18%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 V + +K V K+ I+G G + + + + G+ Sbjct: 1025 VKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----GTSIKFAGLPWEMGL 1080 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA--------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1081 TEAHQVLAMNNLRSRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQ 1140 Query: 295 -------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + E Sbjct: 1141 SNTCPVGVCTQDDSLRAKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1191 >gi|227903091|ref|ZP_04020896.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus acidophilus ATCC 4796] gi|227869170|gb|EEJ76591.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus acidophilus ATCC 4796] Length = 403 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 95/281 (33%), Gaps = 47/281 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EV+ S + KL+ PL+ + M T G Sbjct: 28 DTKFAKKGLTFDDVLLIPAESHVLP----NEVNLSTKLADNIKLNIPLISAGMDTVTEGA 83 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGA 125 + + L + + M++ +Q ++ +KS + A + L A Sbjct: 84 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVIVPSGASKAAVDDQHRLLCA 136 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + + +A+ GAD + + + + A + KI + Sbjct: 137 AAVGVTSDTFERAEALLEAGADAIII----------DTAHGHSAGVLRKIKEIREHFPKQ 186 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ G + +G+ + G+ + + G+P Sbjct: 187 TLI--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQ 232 Query: 246 PLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 233 ITAIYDAATAAREYNKPIIADGGIKYSGDVVKALAAGGNAV 273 >gi|118594657|ref|ZP_01552004.1| IMP dehydrogenase [Methylophilales bacterium HTCC2181] gi|118440435|gb|EAV47062.1| IMP dehydrogenase [Methylophilales bacterium HTCC2181] Length = 486 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 23/146 (15%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIE 225 + + ++ + + +G +++ D L G + G+ + Sbjct: 251 HSKGVLDRVKWIKKNFPT---VDVIGGNIATADAAKALMDHGADGVKVGIGPGSICTT-- 305 Query: 226 SHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + G+P T +S + FIA GG+R DI K+I GAS Sbjct: 306 ----------RIVAGVGVPQITAISNVAEALKKHGIPFIADGGIRYSGDIAKAIAAGASS 355 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLR 309 L F ++ +E + Sbjct: 356 VMLGGMF-----AGTEEAPGEVELYQ 376 >gi|332809597|ref|XP_513583.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] isoform 3 [Pan troglodytes] Length = 1025 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 110/361 (30%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 A+ +P K + I K GG + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSDAT 749 Query: 240 DW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 W G+ T + ++ +A+GG+ + L+ + G Sbjct: 750 PWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSG 809 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V IE ++L K ++EL + A + H Sbjct: 810 ASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSH 859 Query: 337 Q 337 Q Sbjct: 860 Q 860 >gi|323488509|ref|ZP_08093753.1| putative flavoenzyme [Planococcus donghaensis MPA1U2] gi|323397726|gb|EGA90528.1| putative flavoenzyme [Planococcus donghaensis MPA1U2] Length = 541 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 19/240 (7%) Query: 63 SMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN 122 + GG + A T + M +G S+ + + Sbjct: 203 GIAGGTWMNTGEGGISDHHLAGNTDLIMQIGPGLFGVRTPGGEFSW---EAFKEKADMDK 259 Query: 123 LGAVQLNYDFGVQK---AHQAVHVLGADGLFLHLNPLQEIIQPNGNTN---FADLSSKIA 176 + A ++ G + + V + P + + PN T F L I Sbjct: 260 VKAFEVKLAQGAKTRGGHLEGQKVTEEIARIRLIEPGKTVNSPNRFTEYDSFEKLFDFIE 319 Query: 177 LLSSAMDVPLLLKEVGCGLS--SMDIELGLKSG--IRYFDI-AGRGGTSWSRIESHRDLE 231 + P+ +K V + +++ SG + I G GGT + E + Sbjct: 320 EMREVGGKPVGMKIVVGDVEGLEEMVQIMKDSGKGPDFITIDGGEGGTGATYQELADSVG 379 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 I P L + + IASG L I ++ +GA L +A F+ Sbjct: 380 LPIMTAL-----PIVDELLRQYGVRDRVKLIASGKLITPDKIAIALAMGADLVNIARGFM 434 >gi|282901326|ref|ZP_06309252.1| IMP dehydrogenase related 2 [Cylindrospermopsis raciborskii CS-505] gi|281193821|gb|EFA68792.1| IMP dehydrogenase related 2 [Cylindrospermopsis raciborskii CS-505] Length = 387 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 33/111 (29%), Gaps = 35/111 (31%) Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------------------------ 294 IA GGL G DI K I GA + SPF + A Sbjct: 256 VPIIADGGLITGGDICKCIACGADGVMIGSPFARAAEAPGRGYHWGMATPSPVLPRGTRI 315 Query: 295 -----------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + +L SM LG K ++E+ +I Sbjct: 316 RVGTTGTLEQILKGPAGLDDGTHNLLGALKTSMGTLGAKNLKEMQQVEVII 366 >gi|228956945|ref|ZP_04118726.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802788|gb|EEM49624.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|302330396|gb|ADL20590.1| Putative 2-nitropropane dioxygenase [Corynebacterium pseudotuberculosis 1002] gi|308276073|gb|ADO25972.1| putative 2-nitropropane dioxygenase [Corynebacterium pseudotuberculosis I19] Length = 349 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 96/299 (32%), Gaps = 41/299 (13%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM-AVGSQRVMFSDHNAIKSFELRQ 112 KLS P++ + M GG + A ++ + A G++ V + + + +L + Sbjct: 8 KLSRPIVGAPMAGGPSTPALA-----AAISKSGGLGFLASGNKDVALLEQDIRECAQLLR 62 Query: 113 YAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 P+ V N QL+ A + +H L A P I + + +F Sbjct: 63 GEPYGV---NFFYPQLHRTDP--DAVKLLHRLLAKEYAKAGVPQPAIPVVDYSNDFLAKQ 117 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESH--RDL 230 + P ++ ++ +I G + TS E R + Sbjct: 118 DVVFAACKEGYGPKVVSSSFGCFTAEEIRKIHSVGAEAW----ASVTSLEETEVALSRGV 173 Query: 231 ESDIGIVFQDWG-------------IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 ++ I + G T M +A IA+GG+R D+ ++ Sbjct: 174 DALIAQGHEAGGHRLTWDVCETPTPFSTAELCSMIHARHPDAVLIAAGGIRTARDVKVAL 233 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 +GA S FL + E +M G K + + + R Sbjct: 234 SVGACAVSCGSAFLLSHEAGT-----------SEANRAMIAAGGKTLSSRAFSGRIARG 281 >gi|218231636|ref|YP_002365313.1| putative glutamate synthase, large subunit [Bacillus cereus B4264] gi|218159593|gb|ACK59585.1| putative glutamate synthase, large subunit [Bacillus cereus B4264] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|126311394|ref|XP_001381838.1| PREDICTED: similar to dihydropyrimidine dehydrogenase [Monodelphis domestica] Length = 1047 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 109/355 (30%), Gaps = 80/355 (22%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF 99 D VD SVE G K P L S+ + MI R A + AV + Sbjct: 550 IDLVDISVEMAGLKFPNPFGLASAPPATSASMIRR--------AFEAGWGFAVTKTFSLD 601 Query: 100 SD-------------------HNAIKSF-------------------ELRQYAPHTVLIS 121 D SF EL+ P +LI+ Sbjct: 602 KDIVTNVSPRIIRGITSGPVYGPGQSSFLNIELISEKTAAYWCQCVTELKADFPDNILIA 661 Query: 122 NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP---LQEIIQPNGNTNFADLSSKIA-L 177 +L D+ + + GAD L L+L+ + E D+ I Sbjct: 662 SLMCTYNKNDWT--ELSKMAEAAGADALELNLSCSHGMGERGMGLACGQDPDMVRNICRW 719 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAG---------RGGTSWSRIESH 227 + A+ +P K + I + G GT W I Sbjct: 720 IRQAVRIPFFAKLTPNITDIVSIARAAQEGGADGVTATNTVLGLMGLKADGTPWPAI--G 777 Query: 228 RDLESDIGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 ++ G + P L ++ +A+GG+ + L+ + GAS+ + Sbjct: 778 LGKKTTYGSISGTAVRPIALRAVAAIARDLPGFPILATGGIDSAESGLQFLQSGASVLQV 837 Query: 287 ASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 A+ + D V I+ ++L K ++EL + A +RHQ Sbjct: 838 C-----SAVQNQDFTV--IKDYCTGLKALLYL---KSIEELKDWDGQSPATVRHQ 882 >gi|52081616|ref|YP_080407.1| putative dihydroorotate dehydrogenase YrpB [Bacillus licheniformis ATCC 14580] gi|52786997|ref|YP_092826.1| YrpB [Bacillus licheniformis ATCC 14580] gi|52004827|gb|AAU24769.1| putative Dihydroorotate dehydrogenase YrpB [Bacillus licheniformis ATCC 14580] gi|52349499|gb|AAU42133.1| YrpB [Bacillus licheniformis ATCC 14580] Length = 351 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 56/263 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FEL 110 LS P++ + M GG LA A +GS + ++ E Sbjct: 8 LSLSKPVVQAPMAGG------PTTPRLAAAVSDCG---GLGSLASGYLTPEVLQQQILET 58 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 ++ + NL + ++ + + L +P+ + Q ++ D Sbjct: 59 KKLTSAGFQV-NLFIPEKRETVTREEYERWQEKI---PLARSASPVTDEKQ-----DWDD 109 Query: 171 LSSKIALL----SSAMDVPLL------LKEV--------GCGLSSMDIELGLKSGIRYFD 212 KI ++ SA+ +KE+ G +S + L + G+ Sbjct: 110 FYEKIEIILKEGISAVSFTFGPPPADAVKELKNRNCCLMGTAVSVEEAVLLEELGMDVII 169 Query: 213 IAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLR 268 + G GG G + G P S+ + + IA+GG+ Sbjct: 170 VQGSEAGG--------------HRGAFLKTKGEPAVGSMALIPQAADHVSVPVIAAGGIF 215 Query: 269 NGVDILKSIILGASLGGLASPFL 291 + + + LGA + + FL Sbjct: 216 DKRGVAAAFALGAQGVQIGTAFL 238 >gi|88705188|ref|ZP_01102899.1| glutamate synthase, large subunit [Congregibacter litoralis KT71] gi|88700278|gb|EAQ97386.1| glutamate synthase, large subunit [Congregibacter litoralis KT71] Length = 1480 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + G+ Sbjct: 995 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRHAGSP-----WELGLA 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A GG++ G+D++K+ ILGA G +P + Sbjct: 1050 EVQQTLRGNGLRGNVRLQADGGMKTGLDVVKAAILGAESFGFGTAPMVALGCKYLRICHL 1109 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + VV + +E + LG + ++EL T L+ Sbjct: 1110 NNCATGVATQNEYLRDDHFNGTVEMVVHFFTFVAQETREWLASLGMRSLEELIGRTDLLH 1169 Query: 336 H 336 Sbjct: 1170 R 1170 >gi|1945287|emb|CAA73085.1| glutamine--pyruvate aminotransferase [Rhodobacter sphaeroides] Length = 1512 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VTVKLVAASGVGTIAAGVAKAKADVILISGHNGGTGASP----GTSIKYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1083 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+D VV I +E + +G + + E+ Sbjct: 1143 TCPVGVCTQDKKLREKFTGSADKVVNLITFYAQEVREILASIGARSMDEI 1192 >gi|58336540|ref|YP_193125.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus acidophilus NCFM] gi|58253857|gb|AAV42094.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus acidophilus NCFM] Length = 380 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 95/281 (33%), Gaps = 47/281 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGGN 68 D + FDD LI LP +EV+ S + KL+ PL+ + M T G Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVNLSTKLADNIKLNIPLISAGMDTVTEGA 60 Query: 69 NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGA 125 + + L + + M++ +Q ++ +KS + A + L A Sbjct: 61 MAIAMALQGGLGVVHKN----MSIQAQAGEVAN---VKSVIVPSGASKAAVDDQHRLLCA 113 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + + +A+ GAD + + + + A + KI + Sbjct: 114 AAVGVTSDTFERAEALLEAGADAIII----------DTAHGHSAGVLRKIKEIREHFPKQ 163 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ G + +G+ + G+ + + G+P Sbjct: 164 TLI--AGNVATGDATRALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQ 209 Query: 246 PLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 210 ITAIYDAATAAREYNKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|21674116|ref|NP_662181.1| inosine-5'-monophosphate dehydrogenase [Chlorobium tepidum TLS] gi|25453054|sp|Q8KCW4|IMDH_CHLTE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|21647272|gb|AAM72523.1| inosine-5'-monophosphate dehydrogenase [Chlorobium tepidum TLS] Length = 494 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 58/223 (26%), Gaps = 73/223 (32%) Query: 171 LSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +A + + ++ V + + +K+G + G+ + Sbjct: 260 VLDMVATIKQKYPELQVIAGNVA---TPEAVRDLVKAGADAVKVGIGPGSICTT------ 310 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T + + IA GG++ DI K++ GA + Sbjct: 311 ------RIVAGVGMPQLTAIMKCAEEAKKTDIPLIADGGIKYSGDIAKALAAGADSVMMG 364 Query: 288 SPFL------------------------------------------------KPAMDSSD 299 S F K + + Sbjct: 365 SVFAGTDESPGETILYEGRRFKAYRGMGSLGAMSEPEGSSDRYFQDVSAETKKYVPEGIE 424 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L +M G + + EL NT +R Sbjct: 425 GRIPAKGKLDEVVYQLIGGLKSAMGYCGVRTITELKENTRFVR 467 >gi|152974285|ref|YP_001373802.1| glutamate synthase (ferredoxin) [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023037|gb|ABS20807.1| Glutamate synthase (ferredoxin) [Bacillus cytotoxicus NVH 391-98] Length = 1477 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 29/258 (11%) Query: 48 VEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRV 97 V K + P +ISSM+ G+ R A AAE+ + +G Sbjct: 830 VSIAIKNHNLPFIISSMSFGSQNETAF--RAYAEAAERLNMISLNGEGGEIKDMIGKYPH 887 Query: 98 MFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLN 154 A F + ++ +G + G + + + + A + Sbjct: 888 TRGQQIASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTLKIAEARNATI--- 944 Query: 155 PLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRY 210 ++I P+ N + DL+ I + +A + +V + I + K+G + Sbjct: 945 -GSDLISPSNNHDIYSIEDLAQMITEIKTANQFAKVAVKVPVVPNIGTIAVGIAKAGANF 1003 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 +I+G GGT +RI + + + + + G+ + + ++ + A GG+R+ Sbjct: 1004 INISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHQVEIWADGGIRS 1058 Query: 270 GVDILKSIILGASLGGLA 287 D LK ++LGA+ G Sbjct: 1059 VNDALKIMLLGANRIGFG 1076 >gi|296501290|ref|YP_003662990.1| glutamate synthase [NADPH] large chain [Bacillus thuringiensis BMB171] gi|296322342|gb|ADH05270.1| glutamate synthase [NADPH] large chain [Bacillus thuringiensis BMB171] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|229148866|ref|ZP_04277114.1| Glutamate synthase, large subunit [Bacillus cereus m1550] gi|228634660|gb|EEK91241.1| Glutamate synthase, large subunit [Bacillus cereus m1550] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|221640641|ref|YP_002526903.1| glutamine--pyruvate aminotransferase [Rhodobacter sphaeroides KD131] gi|221161422|gb|ACM02402.1| Glutamine--pyruvate aminotransferase [Rhodobacter sphaeroides KD131] Length = 1512 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VTVKLVAASGVGTIAAGVAKAKADVILISGHNGGTGASP----GTSIKYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1083 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+D VV I +E + +G + + E+ Sbjct: 1143 TCPVGVCTQDKKLREKFTGSADKVVNLITFYAQEVREILASIGARSMDEI 1192 >gi|118473370|ref|YP_886685.1| hypothetical protein MSMEG_2340 [Mycobacterium smegmatis str. MC2 155] gi|118174657|gb|ABK75553.1| hypothetical protein MSMEG_2340 [Mycobacterium smegmatis str. MC2 155] Length = 169 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%) Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 K+I LGA + +A P L A+DS+ AV ++ E + + G + ++ Sbjct: 108 AKAIALGADVVAIARPLLAAAIDSAAAVADWLQGFIDELRICLHGSGAPDLAAMH 162 >gi|77464727|ref|YP_354231.1| glutamate synthase (NADPH) large subunit [Rhodobacter sphaeroides 2.4.1] gi|126463567|ref|YP_001044681.1| glutamate synthase (ferredoxin) [Rhodobacter sphaeroides ATCC 17029] gi|332559620|ref|ZP_08413942.1| glutamate synthase (ferredoxin) [Rhodobacter sphaeroides WS8N] gi|77389145|gb|ABA80330.1| glutamate synthase (NADPH) large subunit [Rhodobacter sphaeroides 2.4.1] gi|126105231|gb|ABN77909.1| glutamate synthase (NADPH) large subunit [Rhodobacter sphaeroides ATCC 17029] gi|332277332|gb|EGJ22647.1| glutamate synthase (ferredoxin) [Rhodobacter sphaeroides WS8N] Length = 1512 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VTVKLVAASGVGTIAAGVAKAKADVILISGHNGGTGASP----GTSIKYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1083 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 S+D VV I +E + +G + + E+ Sbjct: 1143 TCPVGVCTQDKKLREKFTGSADKVVNLITFYAQEVREILASIGARSMDEI 1192 >gi|229042366|ref|ZP_04190115.1| Glutamate synthase, large subunit [Bacillus cereus AH676] gi|228726970|gb|EEL78178.1| Glutamate synthase, large subunit [Bacillus cereus AH676] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|229143253|ref|ZP_04271685.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST24] gi|228640334|gb|EEK96732.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST24] Length = 1478 Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|229108135|ref|ZP_04237759.1| Glutamate synthase, large subunit [Bacillus cereus Rock1-15] gi|228675316|gb|EEL30536.1| Glutamate synthase, large subunit [Bacillus cereus Rock1-15] Length = 1479 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 831 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 888 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 889 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 946 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 947 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1004 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1005 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1059 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1060 SVNDALKIMLLGANRIGFG 1078 >gi|288575023|ref|ZP_06393380.1| dihydroorotate dehydrogenase family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570764|gb|EFC92321.1| dihydroorotate dehydrogenase family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 304 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 104/312 (33%), Gaps = 46/312 (14%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMI--ERINRNLAIAAEK----------------- 85 D SV L P++I+S T G ++ + E + R++ K Sbjct: 3 DLSVNIGSVPLRSPVIIASGTWGYDESLWREDLLRHVGAVCSKAITESPKDGNPGHRIWE 62 Query: 86 --TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQ-LNYDFGVQKAHQAVH 142 + ++G Q D K +L+ Y +I+N+ V++ + Sbjct: 63 TPCGLLNSIGLQNTGIDDFVDEKIPKLKSYG--VPIIANVSMEDERGLALIVERLVEVAD 120 Query: 143 VLGADGLFLHL-NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 + A L + N + + + ++++ PL +K + Sbjct: 121 CVDAIELNVSCPNVDKGCMSWGVSPVLTS--QAVSMVQKIWKGPLWVKMTPQAPDPEGVA 178 Query: 202 LGL-KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT--PLSLEMARPYCN- 257 SG +A T ++ V + P P++L + + Sbjct: 179 RAAEDSGADALVVAN---TWLGMAIDVDSRKAVFDRVVAGFSGPAVFPMALRLVWQVSSA 235 Query: 258 -EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSM 316 I GG+ +G D+L I+ GA+ L + + + E++ +E M Sbjct: 236 VSIPVIGCGGVSSGRDLLSMIMAGATAVELGTGMFRD--------IRLPENILREVKAYM 287 Query: 317 FLLGTKRVQELY 328 ++V++L Sbjct: 288 T---KEKVEDLR 296 >gi|254444514|ref|ZP_05057990.1| Conserved region in glutamate synthase superfamily [Verrucomicrobiae bacterium DG1235] gi|198258822|gb|EDY83130.1| Conserved region in glutamate synthase superfamily [Verrucomicrobiae bacterium DG1235] Length = 508 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 64/404 (15%), Positives = 128/404 (31%), Gaps = 85/404 (21%) Query: 5 RKIDHINIVCKDPGIDRNKKFFD--DWHLIHRALPEISFDEVDPSVEFLG--------KK 54 RK ++I+ FD + L H P IS + V P G Sbjct: 109 RKANNIDSAASFGSQ----NDFDATEIKLRHSLFP-ISKEHVLPYQMAFGEERGIQNAYT 163 Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGS---------QRVMFSDHNAI 105 L+ P +IS M+ G + +R R+LA +T M G ++ + Sbjct: 164 LTVPFIISGMSYGA--LGQRAIRSLARGIAQTGGLMNTGEGGYPKYHLMEKCDLAFQIGT 221 Query: 106 KSFELRQYAP--HTVLISNLGAVQLNYDFGVQKAHQAV---------HVLGADGLFLHLN 154 F +R + L+++L A + ++ + A + A+ L Sbjct: 222 AKFGVRNEDGTLNEPLLADLAAKEQVKMIELKLSQGAKPGKGGMLPKEKITAEIAELRGV 281 Query: 155 PL-QEIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL------ 204 P+ ++++ P ++ ++ + I + +P+ +K C + Sbjct: 282 PMGRDVVSPTHHSECEDYPSAVAFIRRIQDVSQLPVGIKL--CIGDPRQFAELVSEMKRQ 339 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 S + I G GGT + + + + + +A + +A Sbjct: 340 DSFPDWITIDGAEGGTGAAPKAFIDRVGMPLFPALKS-----AQDILLASGARQRLKLVA 394 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKP------------------------------ 293 SG L N + + LGA A F+ Sbjct: 395 SGKLINPGSQIIAFCLGADAIATARGFMLSIGCIQAMQCGSNTCPVGITTHHPRLERGII 454 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 D + V + SL + + G + V++L + + ++ Sbjct: 455 IEDKALRVANYVHSLEHDLEELLCSTGARSVKDLSFDNLYVPNE 498 >gi|296413122|ref|XP_002836265.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630078|emb|CAZ80456.1| unnamed protein product [Tuber melanosporum] Length = 1496 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 64/220 (29%), Gaps = 40/220 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + +K V + K+ Sbjct: 961 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCANPRSRVSVKLVSETGVGIVASGVAKAK 1020 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1021 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1075 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1076 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFTGTP 1135 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL--YLNTALIRH 336 + V+ + E M LG + + E+ L+R Sbjct: 1136 ENVINFFYYVANELRAIMARLGFRTINEMIGRSEKLLVRR 1175 >gi|30018717|ref|NP_830348.1| glutamate synthase [NADPH] large chain [Bacillus cereus ATCC 14579] gi|229125962|ref|ZP_04254987.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-Cer4] gi|29894258|gb|AAP07549.1| Glutamate synthase [NADPH] large chain [Bacillus cereus ATCC 14579] gi|228657620|gb|EEL13433.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-Cer4] Length = 1478 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 29/259 (11%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K + P +ISSM+ G+ I R A AA++ + +G Sbjct: 830 EVSIGIKNHNLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYP 887 Query: 97 VMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHL 153 A F + ++ +G + G + + + A + Sbjct: 888 HTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI-- 945 Query: 154 NPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIR 209 ++I P+ N + DL+ I + +A + + +V + I + K+G Sbjct: 946 --GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGAD 1003 Query: 210 YFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + +I+G GGT +RI + + + + + G+ + + ++ + A GG+R Sbjct: 1004 FINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIR 1058 Query: 269 NGVDILKSIILGASLGGLA 287 + D LK ++LGA+ G Sbjct: 1059 SVNDALKIMLLGANRIGFG 1077 >gi|229176131|ref|ZP_04303624.1| GMP reductase [Bacillus cereus MM3] gi|228607366|gb|EEK64695.1| GMP reductase [Bacillus cereus MM3] Length = 328 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 88/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAEQLTPE 114 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + + ++ G + + Sbjct: 115 YITIDIAHGHSNA---------------VINMIQHIKKHLPESFVI--AGNVGTPEAVRE 157 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 158 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 206 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 ADGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 254 >gi|220909593|ref|YP_002484904.1| inosine 5-monophosphate dehydrogenase [Cyanothece sp. PCC 7425] gi|219866204|gb|ACL46543.1| IMP dehydrogenase family protein [Cyanothece sp. PCC 7425] Length = 391 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 55/202 (27%), Gaps = 56/202 (27%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------GTSWSRIESH 227 +A M +P++L G ++ +K+G + G G G + Sbjct: 183 LAQFCREMPMPVIL---GNCVTYEVAFSLMKAGAAGVLVGIGPGAACTSRGVLGVGVPQA 239 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + + R IA GGL G D+ K I GA + Sbjct: 240 SAIADCAAAREDYY-----------RESNRYVPIIADGGLITGGDVCKCIACGADAVMMG 288 Query: 288 SPFLKPA-----------------------------------MDSSDAVVAAIESLRKEF 312 SPF + A + + + Sbjct: 289 SPFARAAEAPGRGYHWGMATPSPVLPRGTRIRVGTTGTLTQILRGPAQLDDGTHNFLGAL 348 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 349 QTSMGTLGAKDIREMQQVEIVI 370 >gi|321314387|ref|YP_004206674.1| putative flavoenzyme [Bacillus subtilis BSn5] gi|320020661|gb|ADV95647.1| putative flavoenzyme [Bacillus subtilis BSn5] Length = 525 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + I + A +L G + V V ++ P + I PN F Sbjct: 248 EEFKRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDSPNRFYEF 307 Query: 169 ADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGLKS------GIRYFDIAGR-GG 218 ++ + + DV P+ +K V ++ + I G GG Sbjct: 308 SNPPEMLDFIEKLRDVGQKPVGIKLVAG--HPEELHELFSHMQKSGKHPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I P +L ++ + ASG L I ++ Sbjct: 366 TGASFYELADTVGLPIMTAL-----PIVDTLLKQYGLRSQLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|319787016|ref|YP_004146491.1| inosine-5'-monophosphate dehydrogenase [Pseudoxanthomonas suwonensis 11-1] gi|317465528|gb|ADV27260.1| inosine-5'-monophosphate dehydrogenase [Pseudoxanthomonas suwonensis 11-1] Length = 486 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 19/140 (13%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGL-SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++A + ++ VG + + +G + G+ + Sbjct: 256 GVLDRVAWVKKNFPQ---VQVVGGNIVTGEAALALYDAGADAVKVGVGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSL-EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 V G+P ++ +A + IA GG+R DI K+I GAS + Sbjct: 308 -------RVVAGVGVPQITAIDLVAEALQDRIPLIADGGIRYSGDIGKAIAAGASTVMIG 360 Query: 288 SPFLKPAMDSSDAVVAAIES 307 F + S V + Sbjct: 361 GLF--AGTEESPGEVELFQG 378 >gi|312868961|ref|ZP_07729141.1| GMP reductase [Lactobacillus oris PB013-T2-3] gi|311095525|gb|EFQ53789.1| GMP reductase [Lactobacillus oris PB013-T2-3] Length = 324 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 93/277 (33%), Gaps = 39/277 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD LI S E D S++F + P++ M ++ +LA+ Sbjct: 6 YDDIQLIPNKCVIKSRKEADTSIQFGPRTFKIPVV-------PANMESVVDEDLAVW--- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + +F R L +++ + ++G +A Sbjct: 56 --LAQNGYYYVMHRFQPEDRLAFVQR--MHDRQLFASISVGIKDAEYGFIDQLKA-EQSV 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G+++F + I + + + G + + Sbjct: 111 PEYITIDV--------AHGHSDF--VIKMIQYIKKQLPTSFVT--AGNVATPEAVRDLEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + ++ + + IA G Sbjct: 159 AGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AAIRLCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 G+R+ DI KS+ GAS+ + L ++S V+ Sbjct: 208 GIRHNGDIAKSVRFGASMV-MIGSMLAGHLESPGHVI 243 >gi|253572830|ref|ZP_04850229.1| oxidoreductase [Bacteroides sp. 1_1_6] gi|251837562|gb|EES65654.1| oxidoreductase [Bacteroides sp. 1_1_6] Length = 365 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDW 241 VP++ + + + G GG + E +D + ++ Sbjct: 138 VPIVSSSRAAKIICDKWQKNYNYLPDAIVVEGPKAGGHLGFKKEQLQDQNYALDVL---- 193 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 IP +++ + IA+GG+ G DI + LGAS + S F+ + Sbjct: 194 -IPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSIFVTTLECDASET 252 Query: 302 VAAI 305 + Sbjct: 253 FKEV 256 >gi|227889118|ref|ZP_04006923.1| inosine-5-monophosphate dehydrogenase [Lactobacillus johnsonii ATCC 33200] gi|227850347|gb|EEJ60433.1| inosine-5-monophosphate dehydrogenase [Lactobacillus johnsonii ATCC 33200] Length = 384 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 91/289 (31%), Gaps = 47/289 (16%) Query: 14 CKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNN 69 + + + FDD LI LP +EV + +L PL+ + M Sbjct: 3 LWETKLAKKGLTFDDVLLIPAESHVLP----NEVKLDTKLAPNLQLHIPLISAGM----- 53 Query: 70 KMIERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 + + A + V S + K + PH + N G Sbjct: 54 ---DTVTEGNMAIAMAENGGLGVIHKNLSIEAQVEEVKKAKGKTVDPNLPH-PAVDNQGR 109 Query: 126 VQLNYDFGV--QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + GV +A +L A + ++ + + A + KI + Sbjct: 110 LLAAAAVGVTSDTFERAESLLEAGADAIVIDTA--------HGHSAGVLRKIKEIREHFS 161 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 L+ G +S +G+ + G+ + + G+ Sbjct: 162 NATLI--AGNVATSEGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVGV 207 Query: 244 PTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 P ++ A + + IA GG++ D++K++ G + L S F Sbjct: 208 PQITAIYDAASVAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 256 >gi|254460320|ref|ZP_05073736.1| hypothetical protein RB2083_910 [Rhodobacterales bacterium HTCC2083] gi|206676909|gb|EDZ41396.1| hypothetical protein RB2083_910 [Rhodobacteraceae bacterium HTCC2083] Length = 1510 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++D VV I +E + +G K + ++ L+ Sbjct: 1138 QSNTCPVGVCTQDEALRDKFTGNADKVVNLITFYAQEVREVLASIGAKSLDDVIGRADLL 1197 Query: 335 RH 336 Sbjct: 1198 HQ 1199 >gi|56696908|ref|YP_167270.1| inosine-5'-monophosphate dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56678645|gb|AAV95311.1| inosine-5'-monophosphate dehydrogenase [Ruegeria pomeroyi DSS-3] Length = 482 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + + + + V ++ V ++ + + +G + G+ + Sbjct: 250 HSAGVIDAVRRIKQQSNMVQVIAGNVA---TAEATKALIDAGADAIKVGIGPGSICTT-- 304 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ + IA GG++ D K+I GAS Sbjct: 305 ----------RMVAGVGVPQLTAIMDCAQAAGDVPVIADGGIKFSGDFAKAIAAGAS-CA 353 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 354 MVGSMIAGTDESPGEVILY 372 >gi|116617761|ref|YP_818132.1| IMP dehydrogenase/GMP reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096608|gb|ABJ61759.1| IMP dehydrogenase/GMP reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 328 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 108/330 (32%), Gaps = 57/330 (17%) Query: 25 FFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNK----MIERIN 76 +D L+ LP V + +L+ PL+ + G +N Sbjct: 11 GYDQVLLVPGASNVLP----YSVTLRTQLSENFELNIPLVSEAF--GPETDTRVAPTALN 64 Query: 77 RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 L + AE+ ++ V S + + + + P+ ++ S + V Sbjct: 65 GGLGVVAEQEDLSKQVASLQQV--KETVVDT----DKYPNALVDSQNHLRVAAEVWLVAG 118 Query: 137 AHQAVHVL---GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 A V L GAD +F +L+ T + I + A + VG Sbjct: 119 AETRVAALVNAGADAIFFYLH----------ETLAKNTRDLIKQIRQAHPDLFIA--VGV 166 Query: 194 GLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 ++G G S L +DI F + +++ Sbjct: 167 VEDQSIAAALYEAGADTI----LAGRSVDS-----SLPNDITYPF----LTVTMNIADVA 213 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA----IESLR 309 + IA GG+ DI+K+I GA + S LK ++ SD I+ Sbjct: 214 AAYDNKSVIAVGGIHYSGDIVKAIAAGADAT-MVSDLLKGSVLESDGSFKEGDMSIDDAI 272 Query: 310 KE----FIVSMFLLGTKRVQELYLNTALIR 335 + M G++ ++ L LN +++ Sbjct: 273 FQTDGGLRAGMGYTGSQTIESLKLNAKIVQ 302 >gi|307823742|ref|ZP_07653970.1| dihydroorotate oxidase [Methylobacter tundripaludum SV96] gi|307735036|gb|EFO05885.1| dihydroorotate oxidase [Methylobacter tundripaludum SV96] Length = 337 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 48/304 (15%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERIN--RNLAIAAEKTKVAMAVGSQRVMFSD 101 VD + ++LG KL+ PL+ S+ + + ++ R L A V ++ +++ + Sbjct: 2 VDLTTDYLGLKLANPLVPSA-----SPLSRDVDSARRLEDAGASALVMYSLFEEKIEAEE 56 Query: 102 HNAIKSFELRQYAPHT-----VLISNLGAVQLNYDFGVQKAHQAVHV------------- 143 H + F + + + N+ Q Y +Q A+ + Sbjct: 57 HQMERFFYNQSIGHNESDSFHPMPDNIQTYQEQYLEHLQTLKSALAIPVIASLNGTSLSG 116 Query: 144 ----------LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 GAD L L++ L +G+ + L + VP+++K Sbjct: 117 WVEYGKQLQQAGADALELNIYHLAANSDESGDAVEQRYLDILQELKGQVSVPIVMKLSSQ 176 Query: 194 GLSS-MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 S + +G I R + + + + + + + +L Sbjct: 177 FSSPIHFAKRLEAAGADGLAIFNR----FYQPDIDLETLEVVPKLELS---SSAEALLRI 229 Query: 253 RPYC-----NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 R + +GG D+LK+++ GA + L S LK ++A +E Sbjct: 230 RWTALLYGRTKLSLAVTGGFHQTPDVLKALLAGADVVHLCSVLLKHGTGRLSEILAEMEQ 289 Query: 308 LRKE 311 E Sbjct: 290 WLAE 293 >gi|228944281|ref|ZP_04106657.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815432|gb|EEM61677.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGANFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|254467253|ref|ZP_05080664.1| hypothetical protein RBY4I_3866 [Rhodobacterales bacterium Y4I] gi|206688161|gb|EDZ48643.1| hypothetical protein RBY4I_3866 [Rhodobacterales bacterium Y4I] Length = 1510 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDESLRAKFTGNADKVVNLITFYAQEVREILASIGARSLDD 1189 >gi|196034772|ref|ZP_03102180.1| putative glutamate synthase, large subunit [Bacillus cereus W] gi|195992815|gb|EDX56775.1| putative glutamate synthase, large subunit [Bacillus cereus W] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 33/264 (12%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMA 91 +EV S++ P +ISSM+ G+ I R A AA++ + Sbjct: 829 EEVSISIQ----NHDLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDM 882 Query: 92 VGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADG 148 +G A F + ++ +G + G + + + A Sbjct: 883 IGKYPHTRGQQVASGRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARN 942 Query: 149 LFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GL 204 + ++I P+ N + DL+ I + +A + + +V + I + Sbjct: 943 ATI----GSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIA 998 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+G + +I+G GGT +RI + + + + + G+ + + + + A Sbjct: 999 KAGANFINISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWA 1053 Query: 264 SGGLRNGVDILKSIILGASLGGLA 287 GG+R+ D LK ++LGA+ G Sbjct: 1054 DGGIRSVNDALKIMLLGANRIGFG 1077 >gi|29347296|ref|NP_810799.1| hypothetical protein BT_1886 [Bacteroides thetaiotaomicron VPI-5482] gi|298385202|ref|ZP_06994761.1| oxidoreductase, 2-nitropropane dioxygenase family [Bacteroides sp. 1_1_14] gi|29339195|gb|AAO76993.1| oxidoreductase, 2-nitropropane dioxygenase family [Bacteroides thetaiotaomicron VPI-5482] gi|298262346|gb|EFI05211.1| oxidoreductase, 2-nitropropane dioxygenase family [Bacteroides sp. 1_1_14] Length = 365 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDW 241 VP++ + + + G GG + E +D + ++ Sbjct: 138 VPIVSSSRAAKIICDKWQKNYNYLPDAIVVEGPKAGGHLGFKKEQLQDQNYALDVL---- 193 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 IP +++ + IA+GG+ G DI + LGAS + S F+ + Sbjct: 194 -IPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSIFVTTLECDASET 252 Query: 302 VAAI 305 + Sbjct: 253 FKEV 256 >gi|330719023|ref|ZP_08313623.1| guanosine 5'-monophosphate oxidoreductase [Leuconostoc fallax KCTC 3537] Length = 328 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 108/350 (30%), Gaps = 82/350 (23%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D L+ S + D +V+ + P++ M I+ +LA Sbjct: 9 YEDIQLVPNKGILSSRSQADTTVKLGTRTFKIPVV-------PANMQTVIDESLAQ---- 57 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + + F + + H ++G Y+F VQ+ H + Sbjct: 58 -HLASHGYFYIMHRFEPEKRLPFIQKMHNQHLFASISIGIKPEEYEF-VQQLHTQGIMPE 115 Query: 146 ADGLFL---HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + + H + + E+IQ + + ++ G + + Sbjct: 116 YTTIDVAHGHSDAVIEMIQ---------------YVKEKLPETFVI--AGNVATPEAVRD 158 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L + ++ I Sbjct: 159 LENAGADATKVGVGPGKVCIT-------KLKTGFGTGGWQL---AALRLCGKAASK-PII 207 Query: 263 ASGGLRNGVDILKSIILGASLG----------------------------GLASPFLKPA 294 A GG+R DI KSI GA+L G AS F K A Sbjct: 208 ADGGIRYNGDIAKSIRFGATLCMIGSLFAGHDETPGEITDQDGQQYKVYFGSASQFQKNA 267 Query: 295 MDSSDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + ++ +R++ ++ G +++ +L ++ Sbjct: 268 YTHVEGKKLLVPYRGSIDHTLKEMREDLQSAISYAGGRQLSDLKRVDYVV 317 >gi|319950266|ref|ZP_08024187.1| putative 2-nitropropane dioxygenase [Dietzia cinnamea P4] gi|319436064|gb|EFV91263.1| putative 2-nitropropane dioxygenase [Dietzia cinnamea P4] Length = 375 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 91/281 (32%), Gaps = 53/281 (18%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF 108 L L P++ + M GG E I A E + M +GS + + + Sbjct: 19 RLLPSHLRRPVIGAPMAGG-PTTPELI----AAVGEAGGLGM-IGSGYLDAA-GTGAEIA 71 Query: 109 ELRQYAPHTVLISNLGAVQ-------LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 +R+ N+ + L G + + +G L + + + Sbjct: 72 RVREI-TDAPFGVNVFLLDRADSDAALAAAGGAEAVERYAEAIGPVARRLEV----ALAE 126 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI--------------------- 200 G T+F + A L++ +D P+ + G+ + Sbjct: 127 SPGFTDF----DQEATLAALLDDPVAVVSFTFGIPEPGVVRSLQDVGTAVVVTVAGVADA 182 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +++G + + + HR + +G D I T R E Sbjct: 183 RRAVEAGADWLSV------QSAEAGGHRSTTT-VGEEPDD--ITTVELTRAVRDALPEVP 233 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 F+A+GG+ D+ + GA L + L+ ++A+ Sbjct: 234 FVAAGGISTPDDVAAVLAAGADGVQLGTVLLRTPEAGTNAL 274 >gi|258569809|ref|XP_002543708.1| glutamate synthase [Uncinocarpus reesii 1704] gi|237903978|gb|EEP78379.1| glutamate synthase [Uncinocarpus reesii 1704] Length = 2185 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1099 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1158 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1159 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQLRT 1213 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS-DAV 301 G D+ + +LGA G A+ P L+ + + + V Sbjct: 1214 GRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLGTCPVGIATQDPVLREKFEGTPEHV 1273 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L+R Sbjct: 1274 INFFYYVANELRAIMAKLGMRTINEMVGRAELLR 1307 >gi|299132805|ref|ZP_07026000.1| ferredoxin-dependent glutamate synthase [Afipia sp. 1NLS2] gi|298592942|gb|EFI53142.1| ferredoxin-dependent glutamate synthase [Afipia sp. 1NLS2] Length = 550 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 91/303 (30%), Gaps = 42/303 (13%) Query: 27 DDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-----LLISSMTGGNNKMIERINRNLAI 81 D + +H ++ + E D + G + + P IS+M+ G R L Sbjct: 138 DGFEWMHHSITPKAPAESDFRIVIGGTECAKPYSASIFNISAMSFGALSANAI--RALNA 195 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKS---------FELR----QYAPHTVLI----SNLG 124 A + A G V F R Q+ P + Sbjct: 196 GARQGGFAHDTGEGGVSPYHRENGGDIIWEIGSGYFGCRTRDGQFDPEAFARVASDDQIK 255 Query: 125 AVQLNYDFGVQ----KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA---DLSSKIAL 177 V+L G + A V L + ++ I P + F+ L I Sbjct: 256 MVELKISQGAKPGHGGVLPAAKVSEEISLIRGVAMGEDCISPAYHRAFSTPVGLMQFIGE 315 Query: 178 LSSAMDV-PLLLK----EVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLE 231 + P K L+ L + + G+ GGT + IE Sbjct: 316 MRRFSGGKPAGFKLCIGHRWEFLAICKAMLQTGIYPDFIVVDGKEGGTGAAPIE----FA 371 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 IG+ +D G+ + + ASG + D+ +++ LGA A F+ Sbjct: 372 DHIGMPMRD-GVNFVHNALIGINARERIHIGASGKIATAFDMARAMALGADWCNSARGFM 430 Query: 292 KPA 294 Sbjct: 431 FAL 433 >gi|183599369|ref|ZP_02960862.1| hypothetical protein PROSTU_02838 [Providencia stuartii ATCC 25827] gi|188021607|gb|EDU59647.1| hypothetical protein PROSTU_02838 [Providencia stuartii ATCC 25827] Length = 488 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 62/221 (28%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I D+P++ V ++ + ++G+ + G+ + Sbjct: 256 GVLQRIRETRKKYPDLPIIGGNVA---TAEGAKALAEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T ++ + IA GG+R DI K+I GA+ + Sbjct: 308 -------RIVTGVGVPQITAIADAVEALEGTGIPVIADGGIRFSGDISKAIAAGAACVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEESPGETILFQGRSYKAYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR 420 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + M L G + +L +R Sbjct: 421 VAYKGRLKDIIHQQMGGLRSCMGLTGCGTIDDLRTKAEFVR 461 >gi|294792628|ref|ZP_06757775.1| glutamate synthase, large subunit [Veillonella sp. 6_1_27] gi|294456527|gb|EFG24890.1| glutamate synthase, large subunit [Veillonella sp. 6_1_27] Length = 1530 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 994 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1053 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1054 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1108 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1109 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1168 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1169 KPEYVENLMLFIARELREIMARLGIRSVAELVGRIDLVRQK 1209 >gi|152990945|ref|YP_001356667.1| glutamate synthase (NADPH), large chain [Nitratiruptor sp. SB155-2] gi|151422806|dbj|BAF70310.1| glutamate synthase (NADPH), large chain [Nitratiruptor sp. SB155-2] Length = 1474 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 34/182 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ I+G GGT + + S + Sbjct: 998 DARVAVKLVSTAGVGTIATGVAKAYADKIIISGGDGGTGAAPLTSI-----KFAGNPWEL 1052 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------- 291 G+ + A Q GGL+ G+DI+K+ ILGA + L Sbjct: 1053 GLSEAHNALKANHLREFVQLQTDGGLKTGLDIVKAAILGAESYAFGTGVLTIIGCKILRV 1112 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + + + D ++ + ++ + LG +++E+ T L Sbjct: 1113 CHLNRCTVGIATQNEFLREHYVGTVDRLINYFTLIAEDVRKILASLGYTKLEEIIGRTDL 1172 Query: 334 IR 335 +R Sbjct: 1173 LR 1174 >gi|53802426|ref|YP_112825.1| inosine-5'-monophosphate dehydrogenase [Methylococcus capsulatus str. Bath] gi|53756187|gb|AAU90478.1| inosine-5'-monophosphate dehydrogenase [Methylococcus capsulatus str. Bath] Length = 487 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 82/265 (30%), Gaps = 64/265 (24%) Query: 78 NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS-NLGAVQLNYDFGVQK 136 L A + V + G + V ++ FE R P T ++ V + ++ Sbjct: 110 ELTRARNISGVPVVDGGELVGIVTSRDLR-FETRYEEPVTRAMTPKERLVTVQEGSSKEE 168 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE------ 190 A + +H + + + + E Q G D + + D P K+ Sbjct: 169 AIRLLHQHRIEKVLI----VNEAFQLRGMITVKD-------IQKSKDYPQACKDEFERLR 217 Query: 191 ----VGCGLSSMD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI--------- 236 VG G + + +E +++G+ + G S ++ R +++ Sbjct: 218 VGAAVGTGAGTEERVEALVEAGVDVIVVDTAHGHSQGVLDRVRWVKTHFPQVQVIGGNIA 277 Query: 237 -----------------------------VFQDWGIP--TPLSLEMARPYCNEAQFIASG 265 + G+P T ++ IA G Sbjct: 278 TGAAARALAEAGADAVKVGIGPGSICTTRIIAGVGVPQITAVANVAQALAGTGIPVIADG 337 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R D+ K+I GA + F Sbjct: 338 GIRYSGDVAKAIAAGAHCVMIGGLF 362 >gi|72162995|ref|YP_290652.1| inosine-5'-monophosphate dehydrogenase [Thermobifida fusca YX] gi|71916727|gb|AAZ56629.1| inosine-5'-monophosphate dehydrogenase [Thermobifida fusca YX] Length = 500 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 33/203 (16%) Query: 105 IKSFELRQYAPHTVLIS----NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 +K F + P+ + +GA G + +A ++ A FL ++ Sbjct: 208 VKDFTKSEQYPNATKDAEGRLVVGAA---VGVGPEAEERAKALVDAGVDFLVVDTA---- 260 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + + A + +A L + V ++ G + + + +G + G+ Sbjct: 261 ----HGHSAGVLEMVAKLKANTRVDVVG---GNIATRAAAQALIDAGADAVKVGVGPGSI 313 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSII 278 + V G P ++ A + IA GGL+ DI K++ Sbjct: 314 CTT------------RVIAGVGAPQITAILEAAKAAGPADVPLIADGGLQYSGDIAKAVA 361 Query: 279 LGASLGGLASPFLKPAMDSSDAV 301 GAS + L +S + Sbjct: 362 AGASTV-MIGSLLAGVEESPGEL 383 >gi|296273783|ref|YP_003656414.1| glutamate synthase [Arcobacter nitrofigilis DSM 7299] gi|296097957|gb|ADG93907.1| Glutamate synthase (ferredoxin) [Arcobacter nitrofigilis DSM 7299] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT + + S + + + G+ Sbjct: 1005 ITVKLVSTIGVGTIAAGVAKAYADRIVISGSDGGTGAAPLTSIKHTGNP-----WEMGLS 1059 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 + A GGL+ G+D++K+ +LGA + L Sbjct: 1060 EAHNALKANSLRESVHLQTDGGLKTGLDVVKAAMLGAESYAFGTAALTLLGCKILRICHT 1119 Query: 295 ------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + D +++ + ++ + LG K ++E+ + L++ Sbjct: 1120 NKCSVGVATQDEDLRAFFTGTVDRLISYFTFIGEDVRKILASLGYKTIEEIVGRSDLLK 1178 >gi|317011069|gb|ADU84816.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori SouthAfrica7] Length = 325 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D + P++ M IN ++A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTTTLGKHTFKMPIV-------PANMQTIINDSIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F +++ ++ S V+ V++ + L Sbjct: 59 NG-----YFYIMHRFDGAARIPF-VKKMKERQLISSISVGVKKEEYLFVEELAKQGLTLD 112 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + + I + + + ++ G + + Sbjct: 113 YITIDI------------AHGHSNSVIKMIQHIKTHLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KSI GA++ + S F S + + Sbjct: 208 GIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|149204275|ref|ZP_01881242.1| Glutamate synthase (ferredoxin) [Roseovarius sp. TM1035] gi|149142160|gb|EDM30207.1| Glutamate synthase (ferredoxin) [Roseovarius sp. TM1035] Length = 1510 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 V + +K V K+ I+G G + + + + G Sbjct: 1022 GVKVCVKLVAQSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLSMNNLRERITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRAKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|15611857|ref|NP_223508.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori J99] gi|45476993|sp|Q9ZKZ2|GUAC_HELPJ RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|4155370|gb|AAD06382.1| GMP REDUCTASE [Helicobacter pylori J99] Length = 325 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 86/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINESIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + + + L L D+ Sbjct: 59 NGYFYIMHRFNGSARIPFVKKMKERQLISSISVGVKKEECLFVEELAKQGLTPDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ---------------RIKTRLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|16077727|ref|NP_388541.1| flavoenzyme [Bacillus subtilis subsp. subtilis str. 168] gi|221308495|ref|ZP_03590342.1| hypothetical protein Bsubs1_03723 [Bacillus subtilis subsp. subtilis str. 168] gi|221312818|ref|ZP_03594623.1| hypothetical protein BsubsN3_03679 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317742|ref|ZP_03599036.1| hypothetical protein BsubsJ_03633 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322021|ref|ZP_03603315.1| hypothetical protein BsubsS_03719 [Bacillus subtilis subsp. subtilis str. SMY] gi|81637610|sp|O34849|YERD_BACSU RecName: Full=Uncharacterized membrane protein yerD gi|2577963|emb|CAA75550.1| YerD protein [Bacillus subtilis subsp. subtilis str. 168] gi|2632973|emb|CAB12479.1| putative flavoenzyme [Bacillus subtilis subsp. subtilis str. 168] Length = 525 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + I + A +L G + V V ++ P + I PN F Sbjct: 248 EEFKRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDSPNRFYEF 307 Query: 169 ADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGLKS------GIRYFDIAGR-GG 218 ++ + + DV P+ +K V ++ + I G GG Sbjct: 308 SNPPEMLDFIEKLRDVGQKPVGIKLVAG--HPEELHELFSHMQKSGKHPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I P +L ++ + ASG L I ++ Sbjct: 366 TGASFYELADTVGLPIMTAL-----PIVDTLLKQYGLRSQLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|281356620|ref|ZP_06243111.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC BAA-548] gi|281316747|gb|EFB00770.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC BAA-548] Length = 497 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 242 GIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 G+P ++ A+ + IA GG++ D+ K++ +GAS + S + + + Sbjct: 322 GVPQVTAVYEVAKSVPRDLPVIADGGIKQSGDVAKALAVGASCVMMGSALAGTSESTGEV 381 Query: 301 VVAA 304 V+ Sbjct: 382 VLHQ 385 >gi|311745194|ref|ZP_07718979.1| ferredoxin-dependent glutamate synthase 1 [Algoriphagus sp. PR1] gi|126577716|gb|EAZ81936.1| ferredoxin-dependent glutamate synthase 1 [Algoriphagus sp. PR1] Length = 1496 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 64/209 (30%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + +K V K+ Sbjct: 978 HSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNANRKARVNVKLVSQAGVGTVAAGVAKAM 1037 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 I+G GGT S + S R + + G+ + + G Sbjct: 1038 ADVILISGADGGTGASPLSSIRH-----AGLPWELGLSEAHQTLVKNNLRSRVVVQTDGQ 1092 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G+++ L K Sbjct: 1093 LRTGRDLAIATLLGAEEWGISTAALVVEGCIMMRKCHLNTCPVGIATQNPELRKLFTGDP 1152 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D VV L ++ M LG + + E+ Sbjct: 1153 DHVVNYFNFLVQDLREIMASLGFRTIDEM 1181 >gi|326388603|ref|ZP_08210196.1| glutamate synthase (NADH) large subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326206854|gb|EGD57678.1| glutamate synthase (NADH) large subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 1526 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 973 HSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNVNGGARISVKLVSEVGVGTVAAGVSKAR 1032 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S S I + T +L + + A GG Sbjct: 1033 ADHVTISGYEGGTGASPLTSLTHAGSPWEIGLAE----TQQTLLL-NNLRSRIAVQADGG 1087 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G D+ + +LGA G A+ L A Sbjct: 1088 LRTGRDVAIAALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRARFTGKP 1147 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + +E M +G + V E+ Sbjct: 1148 EHVINYFFFVAEELRAIMAEMGFRTVAEM 1176 >gi|325913770|ref|ZP_08176131.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B] gi|325476970|gb|EGC80121.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B] Length = 306 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 18/248 (7%) Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N IA K V +VG + K ++ P LI+++G Q++ + Sbjct: 56 NPQPQIAVMKNGVLNSVGLTNPGVDKVISDKIAPFKEQYPQLPLIASVGGSQISDYITIS 115 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 K +L A + + + G T+ + + + +++P+ +K Sbjct: 116 KKLSDSGLLNALEINVSCPNVAAGGMHLG-TDPVVVEKLTSEIKKVVNIPVYIKLTPNVT 174 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIE-----SHRDLESDIGIVFQDWGIPT--PLS 248 + ++I + G G G S + ++ +G F W P++ Sbjct: 175 NIVEIAQAAERG-------GADGLSMINTLLGLGIDIKTHKATLGNGFGGWSGSAIKPVA 227 Query: 249 LEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + M + I GG+ DI++ ++ GAS + + K + +VA +E Sbjct: 228 VRMVAQVHQAVKLPIIGMGGIETAADIVEFMLAGASAVAVGTAHFKDGLA-IPHLVADLE 286 Query: 307 SLRKEFIV 314 +L E V Sbjct: 287 TLLNELKV 294 >gi|313894860|ref|ZP_07828420.1| TIM-barrel protein, nifR3 family [Selenomonas sp. oral taxon 137 str. F0430] gi|312976541|gb|EFR41996.1| TIM-barrel protein, nifR3 family [Selenomonas sp. oral taxon 137 str. F0430] Length = 323 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 77/272 (28%), Gaps = 44/272 (16%) Query: 49 EFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----VAMAVGSQRVMFSDHNA 104 + G P+ ++ M G + I A + A V SQ + + + + Sbjct: 5 KLGGFTFPEPVFLAPMAGVTDTAYRII-------ASEMGCPLAFAEMVSSQGIHYRNEHT 57 Query: 105 IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNG 164 + LR L + A + + + + + G Sbjct: 58 LL--MLRSEPAERPLAMQIFAKSAAMAAEAAAYIEELGTADILDFNMGCPAPKVVKNGEG 115 Query: 165 ---NTNFADLSSKIALLSSAMDVPLLLK-EVGCG-LSSMDIELGLKSGIRYFDIAGRGGT 219 + + + A+ +P +K +G S +E+ + D G Sbjct: 116 SALMRDPKKAEEILKAIRRAVKLPFTVKMRLGWDDTSRNAVEIARIAEAAGVDAVAVHGR 175 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + R+ + ++ + I SG +R D+ +++ + Sbjct: 176 T-------REQFYSGSADY--------EAIAEVKRAV-GIPVIVSGDIRRPADLRRALAI 219 Query: 280 -GASLGGLAS---------PFLKPAMDSSDAV 301 GA + P L + + + + Sbjct: 220 TGADGVMIGRGAQGNPWVFPQLIHWLRTGEEL 251 >gi|295695579|ref|YP_003588817.1| 2-nitropropane dioxygenase NPD [Bacillus tusciae DSM 2912] gi|295411181|gb|ADG05673.1| 2-nitropropane dioxygenase NPD [Bacillus tusciae DSM 2912] Length = 370 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 45/276 (16%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA------MAVGSQRVM 98 D +V + + +P++ + M GG +A + + + M+ S R Sbjct: 4 DTAVTRM-LSVRYPIIQAPMAGGPTTP-----ELVAAVSNEGGLGFLGAGYMSPDSIRAA 57 Query: 99 FSDHNAI--KSFELRQYAPHTVL---ISNLGAV---QLNYDFGVQKAHQAVHVLGADGLF 150 + ++F + + P + + A+ + + ++ + + + + Sbjct: 58 IRRIRQLTDQTFGVNLFIPDQNIQVEREVVKAMIHHLKSLEALPEEVGREIDSIPMENAP 117 Query: 151 LHLNPLQ-EIIQPNGNTNFADL-----SSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 Q E+I F+ +I L S + ++ G S ++ Sbjct: 118 GDTFAQQLEVILDEQIPVFSFTFGCPTQEQIKELKSR-GIRVI----GTATSVVEAVYLQ 172 Query: 205 KSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G+ G GG + + +H I T ++L I Sbjct: 173 EAGVDAVVAQGCEAGGHRGTFLGAHPSSL-----------IGT-ITLVPQIVDRVRIPVI 220 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 ASGG+ +G I + LGAS + + FL + Sbjct: 221 ASGGIMDGRGIAACLTLGASAVQMGTAFLASRESGA 256 >gi|260431913|ref|ZP_05785884.1| glutamate synthase [NADPH] large chain [Silicibacter lacuscaerulensis ITI-1157] gi|260415741|gb|EEX09000.1| glutamate synthase [NADPH] large chain [Silicibacter lacuscaerulensis ITI-1157] Length = 1510 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1025 VTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMGLTE 1080 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1081 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1140 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++D VV I +E + +G + + E+ Sbjct: 1141 TCPVGVCTQDESLRAKFTGNADKVVNLITFYAQEVREILASIGARSLDEI 1190 >gi|94988844|ref|YP_596945.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS9429] gi|94992734|ref|YP_600833.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS2096] gi|306827062|ref|ZP_07460360.1| dihydroorotate oxidase [Streptococcus pyogenes ATCC 10782] gi|94542352|gb|ABF32401.1| dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS9429] gi|94546242|gb|ABF36289.1| Dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS2096] gi|304430808|gb|EFM33819.1| dihydroorotate oxidase [Streptococcus pyogenes ATCC 10782] Length = 315 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + + PL +K Sbjct: 114 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 173 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 174 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 231 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 232 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 284 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G + + + N Sbjct: 285 FERVTKELKTIMVEKGYQSLDDFRGN 310 >gi|71903821|ref|YP_280624.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS6180] gi|94994669|ref|YP_602767.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS10750] gi|71802916|gb|AAX72269.1| dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS6180] gi|94548177|gb|ABF38223.1| Dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS10750] Length = 315 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + + PL +K Sbjct: 114 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 173 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 174 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 231 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 232 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 284 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G + + + N Sbjct: 285 FERVTKELKTIMVEKGYQSLDDFRGN 310 >gi|229020921|ref|ZP_04177612.1| GMP reductase [Bacillus cereus AH1273] gi|229026896|ref|ZP_04183220.1| GMP reductase [Bacillus cereus AH1272] gi|228734399|gb|EEL85069.1| GMP reductase [Bacillus cereus AH1272] gi|228740372|gb|EEL90679.1| GMP reductase [Bacillus cereus AH1273] Length = 328 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEQLS 112 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 113 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 210 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 254 >gi|163745264|ref|ZP_02152624.1| glutamate synthase, large subunit [Oceanibulbus indolifex HEL-45] gi|161382082|gb|EDQ06491.1| glutamate synthase, large subunit [Oceanibulbus indolifex HEL-45] Length = 1510 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLSMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYATEVREILASIGARSLDE 1189 >gi|254418378|ref|ZP_05032102.1| Conserved region in glutamate synthase family [Brevundimonas sp. BAL3] gi|196184555|gb|EDX79531.1| Conserved region in glutamate synthase family [Brevundimonas sp. BAL3] Length = 1503 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D + +K V K+ IAG G + + + + G Sbjct: 1029 DAKVTVKLVSASGIGAIASGVAKANADAILIAGHNGGTGASP----QTSIKHAGLPWEIG 1084 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GG+R G D++ + +LGA G+ + L Sbjct: 1085 LAEAHQVLTLNNLRGTVTLRTDGGVRTGRDVVIAAMLGAEEYGVGTAALIAMGCLMVRQC 1144 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + D VV + +E + +G + + E+ T L+ Sbjct: 1145 HSNTCPVGVCSQDERLREKFTGTPDKVVNLFTFIAEETREILASIGARTMDEIIGRTDLL 1204 Query: 335 RH 336 R Sbjct: 1205 RQ 1206 >gi|171689118|ref|XP_001909499.1| hypothetical protein [Podospora anserina S mat+] gi|170944521|emb|CAP70632.1| unnamed protein product [Podospora anserina S mat+] Length = 2114 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 32/203 (15%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1045 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSETGVGIVASGVAKAK 1104 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1105 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1159 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------KPAMDSSDAVVAA 304 LR G D+ + +LGA G A+ L K + + V+ Sbjct: 1160 LRTGRDVALACLLGAEEWGFATTPLIAMGCIMNTCPVGIATQDPELRKKFTGTPEHVINF 1219 Query: 305 IESLRKEFIVSMFLLGTKRVQEL 327 + E M LG + V E+ Sbjct: 1220 FYYVANELRAIMAKLGFRTVNEM 1242 >gi|145298655|ref|YP_001141496.1| glutamate synthase subunit alpha [Aeromonas salmonicida subsp. salmonicida A449] gi|142851427|gb|ABO89748.1| glutamate synthase, large subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 1496 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + ++G GGT S + S + S + + Sbjct: 1006 VSVKLVSEPGVGTIACGVAKAYADFITVSGYDGGTGASPLTSVKYAGSPWELGLAE---- 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 T +L +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1062 TQQAL-VANGLRHKVRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1120 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + + +E M LG ++ +L T L+ Sbjct: 1121 NNCATGVATQDEKLRREHFTGLPEMVMNYFKFIAEETRELMAQLGVTQLTDLIGRTDLLE 1180 >gi|78042653|ref|YP_360021.1| inosine-5'-monophosphate dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] gi|77994768|gb|ABB13667.1| inosine-5'-monophosphate dehydrogenase [Carboxydothermus hydrogenoformans Z-2901] Length = 483 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 21/145 (14%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + + + S L+ G ++ E +K+G + G+ + Sbjct: 252 HSRGVLEAVYKIKSKYPEVELV--AGNVATAEATEDLIKAGADAVKVGIGPGSICTT--- 306 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLG 284 V G+P ++ + IA GG++ DI K++ GA Sbjct: 307 ---------RVVAGIGVPQITAILDCAEVAMKYDVPIIADGGIKYSGDITKALAAGADTV 357 Query: 285 GLASPFLKPAMDSSDAVVAAIESLR 309 L + ++ IE + Sbjct: 358 -----MLGSLLAGTEESPGEIEIWQ 377 >gi|88855845|ref|ZP_01130508.1| inositol-5-monophosphate dehydrogenase [marine actinobacterium PHSC20C1] gi|88815169|gb|EAR25028.1| inositol-5-monophosphate dehydrogenase [marine actinobacterium PHSC20C1] Length = 373 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 53/202 (26%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG S +++G + G GG + S S + + Sbjct: 178 NLKEFIYELDVPVI---VGGAASYTAALHLMRTGAAGVLV-GFGGGAASTTRSALGIHAP 233 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + IA GGL DI+K+I +GA L Sbjct: 234 MATAVAD--------VAGARRDYMDESGGRYVHVIADGGLGTSGDIVKAIAVGADAVMLG 285 Query: 288 SPFLKP-------AMDSSDA------------------VVAAIE----------SLRKEF 312 S + +A + + +L Sbjct: 286 STLARATDAPGGGWHWGQEAHHLELPRGNRVEVGQLAPLAEILNGPSSHANGQSNLIGAL 345 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM G ++E ++ Sbjct: 346 RRSMATTGYSDLKEFQRVDVVV 367 >gi|319400169|gb|EFV88404.1| conserved region in glutamate synthase family protein [Staphylococcus epidermidis FRI909] Length = 525 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 92/277 (33%), Gaps = 43/277 (15%) Query: 50 FLGKKLSFPLLI------SSMTGGN--NKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 LG L P I S M+ G I +++ LA A S+ + + Sbjct: 165 ILGSNLKHPFKIKRLVGQSGMSYGALGKNAITALSKGLAKAGTWMNTGEGGLSEYHLKGN 224 Query: 102 HNAIKS-----FELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVLG 145 + I F +R + + + NL F ++ A A V Sbjct: 225 GDIIYQIGPGLFGVRDHDGNFNKDMFINLAEHDNVRAFEIKLAQGAKTRGGHMEGNKVTE 284 Query: 146 ADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 ++ P + I PN N DL + + L S P+ K V + +IE Sbjct: 285 EIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNRLQSIGQKPVGCKIVVSKV--EEIET 342 Query: 203 GLKSGIRYFDI--------AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 +K+ + DI G GGT + E + + P S+ Sbjct: 343 LVKTMVE-IDIYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKYG 396 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + ASG L I ++ LGA L +A + Sbjct: 397 IRDKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|321263191|ref|XP_003196314.1| glutamate synthase (NADH) [Cryptococcus gattii WM276] gi|317462789|gb|ADV24527.1| glutamate synthase (NADH), putative [Cryptococcus gattii WM276] Length = 2135 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT ++ + + G+ Sbjct: 1044 LVSEVGVGIVASGVA---KAKADHITISGHDGGTGAAK-----WTSIKYAGLPWELGLAE 1095 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G +R G DI + +LGA G A+ Sbjct: 1096 THQTLVLNNLRGRVTVQTDGQIRTGRDIAIATLLGAEEWGFATTPLIAMGCIMMKACHKN 1155 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ + V+ + +E M LG + + E+ Sbjct: 1156 TCPVGIATQDPALRAKFAGQPEQVINFFYYVIEELRQIMAKLGFRTINEM 1205 >gi|305663314|ref|YP_003859602.1| IMP dehydrogenase [Ignisphaera aggregans DSM 17230] gi|304377883|gb|ADM27722.1| IMP dehydrogenase [Ignisphaera aggregans DSM 17230] Length = 467 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 53/145 (36%) Query: 243 IPTPLSLEMARPYCNE----AQFIASGGLRNGVDILKSIILGAS--LGG--------LAS 288 IPT + R + IA GG+R G DI+K++ GAS + G ++ Sbjct: 310 IPTLWGVAEVRDALEDQKVDIPIIADGGIRTGGDIVKALATGASSAMVGYLVAGTDEASA 369 Query: 289 PFL--------------------------------KPAMDSSDAVV-------AAIESLR 309 P + K + + +V I+ + Sbjct: 370 PIIAIGDNLYKPYRGMASIGAMKRRFAVDRYSRVSKRVAEGVEGLVPYRGSVYNVIQDVV 429 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 + M G + V+EL+ I Sbjct: 430 EAIRAGMGYAGARTVEELWSKAIFI 454 >gi|120436672|ref|YP_862358.1| hypothetical protein GFO_2326 [Gramella forsetii KT0803] gi|117578822|emb|CAL67291.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 531 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 82/256 (32%), Gaps = 34/256 (13%) Query: 61 ISSMTGGN--NKMIERINR--NLAIAAEKTK-------------VAMAVGSQRVMFSDHN 103 IS+M+ G+ K IE +N LA A T V +G+ D N Sbjct: 153 ISAMSYGSLSAKAIESLNEGCKLAGAFHNTGEGGLSPYHKKGADVVFQIGTGYFGVRDEN 212 Query: 104 AIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ----KAHQAVHVLGADGLFLHLNPLQEI 159 I F + + + A++L G + A + + +++ Sbjct: 213 GI--FSMEKLVQLVKDNPQVRAIELKLSQGAKPGKGGVLPAAKISKEISEIRGVPMGKDV 270 Query: 160 IQPNGNTNF---ADLSSKIALLSSAMDVPLLLKE-VGCGLSSMDIELGL---KSGIRYFD 212 I P + F + + ++ A +P +K VG + + G + Sbjct: 271 ISPAYHHTFDTIEGMVEFVEKIAKATGLPTGIKSAVGQLKDWETLARIMQEKDLGPDFIS 330 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVD 272 I G G + + S +D + + + N FIASG L Sbjct: 331 IDGGEGGTGAAPPSF----ADHVSLPWIYAFTDVYKIFQKYKLTNRIVFIASGKLGFPAK 386 Query: 273 ILKSIILGASLGGLAS 288 + LGA +A Sbjct: 387 AAMAFALGADCINVAR 402 >gi|323701920|ref|ZP_08113590.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323533224|gb|EGB23093.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 484 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 70/449 (15%), Positives = 135/449 (30%), Gaps = 141/449 (31%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD LI A E+ EVD S KL+ P++ + M T ++M I R I Sbjct: 13 FDDVLLIPAA-SEVLPREVDTSTYITKDIKLNIPIMSAGMDTVTESRMAIAIAREGGIGV 71 Query: 84 EKTKV-----AMAVG----SQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYD--- 131 + A+ V S+ + +D + + A + ++ V + + Sbjct: 72 IHKNMSIKRQALEVDKVKRSEHGIITDPIFLSPDSPIRDAHELMERYHISGVPITVEGKL 131 Query: 132 ----------FGVQKAHQAVHVLGADGLFL-----HLNPLQEIIQP---------NGNTN 167 F + + V+ D L L ++I+ + + N Sbjct: 132 VGILTNRDLRFETNENRRCGDVMTKDNLITAPVGTTLEEAKQILMKHKVEKLPIVDEHYN 191 Query: 168 FADLSSKIALLSSAMDVPLLLKE----------VGCGLSSMD-IELGLKSGIRYFDIAGR 216 L + I + A + P K+ VG +M+ +E +K+ + + Sbjct: 192 LRGLIT-IKDIKKAKEYPNSAKDHRGRLRVAAAVGVASDTMERVEALVKAKVDIIVVDTA 250 Query: 217 GGTSWSRIESHRDLESDIGIV--------------------------------------F 238 G S IE+ R++ S + Sbjct: 251 HGHSRLVIETVRNIRSAYPNLNIIAGNVATAEATKDLIAAGADAIKVGIGPGSICTTRVV 310 Query: 239 QDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLG------------ 284 G+P ++ ++ IA GG++ DI+K++ GA++ Sbjct: 311 AGVGVPQITAVYDCYQEALKHDIPIIADGGIKYSGDIVKALAAGANVVMLGSILAGTEES 370 Query: 285 ----------------GLA-----------SPFLKPAM----DSSDA-------VVAAIE 306 G+ F + A + + + I Sbjct: 371 PGEKEIYQGRSYKVYRGMGSLGAMKQGSGDRYFQEQAKKMVPEGVEGRVPYKGHLADTIF 430 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L M G + ++EL + + +R Sbjct: 431 QLVGGLRAGMGYCGCRTIEELKVKSRFVR 459 >gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5] gi|6016372|sp|O67820|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5] Length = 490 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 30/149 (20%) Query: 172 SSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++A L A V +++ + G S +E + IAG + + E + Sbjct: 235 LDRVAALVEA-GVDVIVVDTAHGHSKRVLETVEKIKANFPEVDVIAG----NVATAEGTK 289 Query: 229 DLESDIGIVF---------------QDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGV 271 L G+P ++ A + IA GG+R Sbjct: 290 ALIEAGADAVKVGVGPGSICTTRIVAGVGVPQLTAIMEAASAAREYDIPIIADGGIRYSG 349 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDA 300 DI+K++ GAS L + ++ Sbjct: 350 DIVKALAAGASAV-----MLGNLLAGTEE 373 >gi|163943136|ref|YP_001648020.1| guanosine 5'-monophosphate oxidoreductase [Bacillus weihenstephanensis KBAB4] gi|229065105|ref|ZP_04200398.1| GMP reductase [Bacillus cereus AH603] gi|163865333|gb|ABY46392.1| guanosine monophosphate reductase [Bacillus weihenstephanensis KBAB4] gi|228716134|gb|EEL67853.1| GMP reductase [Bacillus cereus AH603] Length = 327 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 55 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEQLS 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 112 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEN 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 209 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 253 >gi|119505247|ref|ZP_01627322.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2080] gi|119458938|gb|EAW40038.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2080] Length = 492 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 81/262 (30%), Gaps = 34/262 (12%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFE 109 LS P I +++ G K +N A + + +G+ + D + S + Sbjct: 154 LSAP-AIQALSMGAAKAGILLNTGEGGLAPFHLKGQCDLVFQIGTAKYGVRDTDGTLSDD 212 Query: 110 -LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 L + A H + + G A V + Q+ + PN + + Sbjct: 213 KLEEVAAHASVKMFEIKLSQGAKPGKGGILPAEKVTEVIASTRGIPMGQDSLSPNRHIDI 272 Query: 169 ---ADLSSKIALLSSAMDVPLLLKEVGCGLSS-MDIELG-----LKSGIRYFDI-AGRGG 218 DL S I + P+ +K V D L + + + GG Sbjct: 273 GSVNDLLSMIHRVREVTGKPVGIKFVLGQPEWLDDFCKAIQTQGLDYAPDFVTVDSADGG 332 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVD 272 T + + + G+P SL + + +ASG + Sbjct: 333 T-----------GAAPQSLMDNVGLPADSSLPWVVDKLIEYGLRERIKVMASGKMSTPSG 381 Query: 273 ILKSIILGASLGGLASPFLKPA 294 + ++ LGA A F+ Sbjct: 382 VAAALCLGADSVNTARGFMFAL 403 >gi|34541640|ref|NP_906119.1| dihydroorotate dehydrogenase 2 [Porphyromonas gingivalis W83] gi|34397958|gb|AAQ67018.1| dihydroorotate dehydrogenase family protein [Porphyromonas gingivalis W83] Length = 326 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 97/292 (33%), Gaps = 31/292 (10%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE-------KTKVAMAVGSQR 96 +D S EF G +L P+ +++ +G + + A A + ++ + Sbjct: 2 IDLSTEFAGLRLKNPI-VAASSGLTRNLKTIKDLEAAGVAAIVLKSLFEEQIEAEMSQMM 60 Query: 97 VMFSDHNAIK---------------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A F LR+ + D V A Q Sbjct: 61 SPMDYPEAADYINAYVQSNEISKHLDF-LREVKREVAIPVIASINCFRSDSWVDFAKQ-F 118 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS-SMDI 200 GAD L +++ L + + N I+ L A+ +P+++K + + Sbjct: 119 EEAGADALEINVMRLNTDLFFDANKAEQMYVDIISSLIKAIRIPVVVKLSKSFANIPSLV 178 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG-IP-TPLSLEMARPYCNE 258 + +G + + R I+ ++ G VF G I T + Sbjct: 179 DKLRAAGAKGVVLFNRSYQPDIDIDK---VQMVAGDVFTSAGEISDTIRHAGIVSALVPG 235 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 +S G+ +G LK ++ GA + + + K ++A IES + Sbjct: 236 ISIASSTGIHDGEAALKCLLAGAHVTQICTVLYKKGPQFVAEMIATIESWMQ 287 >gi|262373632|ref|ZP_06066910.1| glutamate synthase subunit large [Acinetobacter junii SH205] gi|262311385|gb|EEY92471.1| glutamate synthase subunit large [Acinetobacter junii SH205] Length = 1494 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1008 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1063 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1122 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + ++ + + +E + LG +++L Sbjct: 1123 NNCATGVATQQDHLRQEHYIGEPEMLINFFKFIAEETREWLAALGVASLKDL 1174 >gi|313681917|ref|YP_004059655.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM 16994] gi|313154777|gb|ADR33455.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM 16994] Length = 481 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 86/250 (34%), Gaps = 34/250 (13%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH 116 PL +++ G + E+I + K+ + + IK + R PH Sbjct: 155 MPL-VTAKAGITLEEAEQIMHK----NKIEKLPII--DENGFLKGLITIKDIKKRIEYPH 207 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 + G +++ GV + +A ++ A L L+ + + + + Sbjct: 208 ANK-DDFGRLRVGAAIGVGQLDRARALVDAGVDVLVLDSA--------HGHSKGIIDTVK 258 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + M V ++ V G +++G + G+ + Sbjct: 259 AIKKDMVVDIIAGNVATG---EATLALIEAGADGVKVGIGPGSICTT------------R 303 Query: 237 VFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + G+P +++ + IA GG+R DI K++ +GAS+ +A L Sbjct: 304 IVAGVGVPQISAIDECAAVGRKHGVPIIADGGIRYSGDIAKALAVGASVI-MAGSLLAGT 362 Query: 295 MDSSDAVVAA 304 +S + Sbjct: 363 EESPGDTIMY 372 >gi|315231806|ref|YP_004072242.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP] gi|315184834|gb|ADT85019.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP] Length = 485 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 129/449 (28%), Gaps = 148/449 (32%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLISSM-TGGNNKMIERINRNLAIAA 83 FDD LI +A E+ +VD S + KL+ P+L ++M T +M A Sbjct: 17 FDDVLLIPQA-TEVEPKDVDVSTQITPNIKLNIPILSAAMDTVTEWEMA-------VAMA 68 Query: 84 EKTKVA-----MAVGSQRVMFSDHNAIKSF---ELRQYAPH------------------- 116 + + M++G Q M + F ++ +P Sbjct: 69 REGGLGVIHRNMSIGEQVEMVKKVKKAERFIIEDVITISPDETLDYALFLMEKHDIDGLP 128 Query: 117 TVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN-PLQEI--IQPNGNTNFADLSS 173 + + + D ++ + ++ + + + + ++E I + + + Sbjct: 129 VIKDGKVVGIVSKKDIAAKEGQKVKDIMTKEVITVEEDISVEEAMKIMVKNRIDRLPVVN 188 Query: 174 KIALLSSAMDVP--LLLKE-------------VGCGLSSMDIELGL---KSGIRYFDIAG 215 K L + + +L K+ V + D++ L ++G I Sbjct: 189 KKGKLIGLITMSDLVLRKKFKNAVRDENGDLLVAAAVGPFDLKRALALDRAGADVIVIDT 248 Query: 216 RGGTSWSRIESHRDLESDIGIVF-----------------------------------QD 240 + I+S +++ + + Sbjct: 249 AHAHNLKAIKSMKEIRAKVDADLIVGNIANPKAVDDLTFADAIKVGIGPGSICTTRVVAG 308 Query: 241 WGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF-------- 290 G+P T ++L R + IA GG++ DI+K+I GA L + Sbjct: 309 VGVPQITAIALVADRAGEYGIKVIADGGIKYSGDIVKAIAAGADAVMLGNLLAGTKEAPG 368 Query: 291 ------------------LKPAMDSS--------------------DAVV-------AAI 305 L M + VV + Sbjct: 369 KEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGHMKTRKFVPEGVEGVVPYKGSVSEVL 428 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALI 334 L M +G K +QEL + Sbjct: 429 YQLIGGLRAGMGYVGAKNIQELKEKGEFV 457 >gi|117619669|ref|YP_857211.1| glutamate synthase subunit alpha [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561076|gb|ABK38024.1| glutamate synthase [NADPH] large chain [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1485 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + ++G GGT S + S + S + + Sbjct: 995 VSVKLVSEPGVGTIACGVAKAYADFITVSGYDGGTGASPLTSVKYAGSPWELGLAE---- 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 T +L +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 TQQAL-VANGLRHKVRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + + +E M LG ++ +L T L+ Sbjct: 1110 NNCATGVATQDEKLRREHFTGLPEMVMNYFKFIAEETRELMAQLGVTQLTDLIGRTDLLE 1169 >gi|124298016|gb|AAI31779.1| Dihydropyrimidine dehydrogenase [Homo sapiens] Length = 1025 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 113/359 (31%), Gaps = 88/359 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGANGITATNTVSGLMGLKSDGTPWPAVGIAKR 759 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 760 TTYG--------GVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 + + A+ + D V IE ++L K ++EL + A + HQ Sbjct: 812 VLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSHQ 860 >gi|284043278|ref|YP_003393618.1| glutamate synthase (ferredoxin) [Conexibacter woesei DSM 14684] gi|283947499|gb|ADB50243.1| Glutamate synthase (ferredoxin) [Conexibacter woesei DSM 14684] Length = 1509 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 67/213 (31%), Gaps = 36/213 (16%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + + +K V K+ + Sbjct: 981 PGVGLISPPPHHDIYSIEDLKQLIYDLRCSNPEATVSVKLVSEVGVGTVAAGVAKANADH 1040 Query: 211 FDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 ++G G + + +S + G+ + + A G ++ G Sbjct: 1041 IVVSGHDGGTGASPQSSIQS----AGTPWEIGLAETQQTLLLNDLRSRVVVQADGQMKTG 1096 Query: 271 VDILKSIILGASLGGLASPFL----------------------------KPAMDSSDAVV 302 D++ + +LGA G ++ L K + D VV Sbjct: 1097 RDVVIAALLGADEVGFSTAPLIAMGCIMMRVCHLNTCPVGIATQNEQLRKRFQGTPDHVV 1156 Query: 303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + +E M LG + +E+ T L+ Sbjct: 1157 KYLFFVAEETRQLMASLGVRTFEEMIGRTDLLE 1189 >gi|229015850|ref|ZP_04172823.1| Glutamate synthase, large subunit [Bacillus cereus AH1273] gi|228745449|gb|EEL95478.1| Glutamate synthase, large subunit [Bacillus cereus AH1273] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPNTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANHLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEAHMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|229131463|ref|ZP_04260358.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST196] gi|228651993|gb|EEL07935.1| Glutamate synthase, large subunit [Bacillus cereus BDRD-ST196] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANHLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|229170158|ref|ZP_04297845.1| GMP reductase [Bacillus cereus AH621] gi|228613303|gb|EEK70441.1| GMP reductase [Bacillus cereus AH621] Length = 328 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEQLS 112 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 113 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 210 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 254 >gi|227830499|ref|YP_002832279.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus L.S.2.15] gi|229579312|ref|YP_002837710.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus Y.G.57.14] gi|284997994|ref|YP_003419761.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus L.D.8.5] gi|227456947|gb|ACP35634.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus L.S.2.15] gi|228010026|gb|ACP45788.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus Y.G.57.14] gi|284445889|gb|ADB87391.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus L.D.8.5] Length = 290 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + + LI ++G +N + + V V+ + + +N + PN Sbjct: 78 AINEINVSCPLIVSVGGASIN------EIKEVVKVIESKAKIIEIN----VSSPNRKGYG 127 Query: 169 ADLSSKIALLSSAMD----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 LS+ I + + +P+ +K L+ G F + I Sbjct: 128 ESLSTLIGDIVENVKSVTRLPVFVKLGPWDNVVELAGRALEKGADGFTLINTIRGLIVDI 187 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGAS 282 E+ + + + P++L + R E I GG+ + D++ + +GA Sbjct: 188 ETFKPILYYGTGGVSGRCLY-PVALRIIRDVYEEYGVDIIGVGGVYDWTDVIGMLAVGAK 246 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKE 311 L GL + ++ + + ++S E Sbjct: 247 LVGLGTVLIEKGFSIIEEIRKGLQSYLFE 275 >gi|119468952|ref|ZP_01611977.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium TW-7] gi|119447604|gb|EAW28871.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium TW-7] Length = 489 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 55/197 (27%), Gaps = 70/197 (35%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMAR 253 ++ +G+ + G+ + + G+P T +S + Sbjct: 280 TAEGAIALADAGVDAVKVGIGPGSICTT------------RIVTGCGVPQITAISDAVDG 327 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------------------- 291 + IA GG+R DI+K+++ GAS + L Sbjct: 328 LKGRDIPVIADGGIRFSGDIVKALVAGASCV-MVGSMLAGTEEAPGEVELYQGRYYKSYR 386 Query: 292 --------------------------KPAMDSSDAVVAA---IESLRKE----FIVSMFL 318 K + + VA I ++ + +M L Sbjct: 387 GMGSLGAMDQKEGSSDRYFQKSNEADKLVPEGIEGRVAYKGPIATIIHQQVGGLRSAMGL 446 Query: 319 LGTKRVQELYLNTALIR 335 G ++EL +R Sbjct: 447 TGCATIEELNTKPQFVR 463 >gi|15602160|ref|NP_245232.1| inositol-5-monophosphate dehydrogenase [Pasteurella multocida subsp. multocida str. Pm70] gi|13959397|sp|Q9L6B7|IMDH_PASMU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|7716503|gb|AAF68407.1|AF237921_1 inosine-5'-monophosphate dehydrogenase [Pasteurella multocida] gi|12720528|gb|AAK02379.1| GuaB [Pasteurella multocida subsp. multocida str. Pm70] Length = 487 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 80/295 (27%), Gaps = 81/295 (27%) Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 + M + + KS + Q +GA + G ++ A+ G D L + Sbjct: 193 KGMITLKDYQKSEQKPQACKDEFGRLRVGAA-VGAGPGNEERIDALVKAGVDVLLI---- 247 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + + + + ++ + D+P++ V ++ +G + Sbjct: 248 ------DSSHGHSEGVLQRVRETRAKYPDLPIVAGNVA---TAEGAIALADAGASAVKVG 298 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVD 272 G+ + + G+P ++ A + IA GG+R D Sbjct: 299 IGPGSICTT------------RIVTGVGVPQITAIADAAEALKDRGIPVIADGGIRFSGD 346 Query: 273 ILKSIILGASLGGLASPFL----------------------------------------- 291 I K+I GAS + S F Sbjct: 347 ISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLGAMSKGSSDRYFQSD 406 Query: 292 ----KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + I M L G + EL +R Sbjct: 407 NAADKLVPEGIEGRIPYKGFLKEIIHQQMGGLRSCMGLTGCATIDELRTKAQFVR 461 >gi|229581928|ref|YP_002840327.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus Y.N.15.51] gi|228012644|gb|ACP48405.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus Y.N.15.51] Length = 290 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + + LI ++G +N + + V V+ + + +N + PN Sbjct: 78 AINEINVSCPLIVSVGGASIN------EIKEVVKVIESKAKIIEIN----VSSPNRKGYG 127 Query: 169 ADLSSKIALLSSAMD----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 LS+ I + + +P+ +K L+ G F + I Sbjct: 128 ESLSTLIGDIVENVKSVTRLPVFVKLGPWDNVVELAGRALEKGADGFTLINTIRGLIVDI 187 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGAS 282 E+ + + + P++L + R E I GG+ + D++ + +GA Sbjct: 188 ETFKPILYYGTGGVSGRCLY-PVALRIIRDVYEEYGVDIIGVGGVYDWTDVIGMLAVGAK 246 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKE 311 L GL + ++ + + ++S E Sbjct: 247 LVGLGTVLIEKGFSIIEEIRKGLQSYLFE 275 >gi|322710663|gb|EFZ02237.1| glutamate synthase [Metarhizium anisopliae ARSEF 23] Length = 2111 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1038 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSEVGVGIVASGVAKAK 1097 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1098 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1152 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1153 LRTGRDVAIACLLGAEEWGFATAPLIAMGCIFMRKCHLNTCPVGIATQDPELRKKFQGTP 1212 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1213 EHVINFFYYIANELRAIMAQLGFRTINEM 1241 >gi|322701793|gb|EFY93541.1| glutamate synthase [Metarhizium acridum CQMa 102] Length = 2111 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1038 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSEVGVGIVASGVAKAK 1097 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1098 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1152 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1153 LRTGRDVAIACLLGAEEWGFATAPLIAMGCIFMRKCHLNTCPVGIATQDPELRKKFQGTP 1212 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1213 EHVINFFYYIANELRAIMAQLGFRTINEM 1241 >gi|306825014|ref|ZP_07458357.1| dihydroorotate dehydrogenase A [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432841|gb|EFM35814.1| dihydroorotate dehydrogenase A [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 311 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMAEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|229056304|ref|ZP_04195724.1| Glutamate synthase, large subunit [Bacillus cereus AH603] gi|228721029|gb|EEL72569.1| Glutamate synthase, large subunit [Bacillus cereus AH603] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANHLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|124297137|gb|AAI31778.1| Dihydropyrimidine dehydrogenase [Homo sapiens] Length = 1025 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 110/361 (30%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFVNPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 A+ +P K + I K GG + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSDGT 749 Query: 240 DW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 W G+ T + ++ +A+GG+ + L+ + G Sbjct: 750 PWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSG 809 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V IE ++L K ++EL + A + H Sbjct: 810 ASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSH 859 Query: 337 Q 337 Q Sbjct: 860 Q 860 >gi|37526603|ref|NP_929947.1| inositol-5-monophosphate dehydrogenase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786035|emb|CAE15087.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 488 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 61/222 (27%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + ++ ++ V G + + +G+ + G+ + Sbjct: 256 GVLQRIRETRAKYPNLQIIGGNVATG---EGAKALVAAGVNAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAISDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-M 359 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 360 VGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEG 419 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++++ + M L G + EL +R Sbjct: 420 RVAYKGLLKNIVHQQMGGLRSCMGLTGCATIDELRTKAEFVR 461 >gi|253991121|ref|YP_003042477.1| glutamate synthase subunit alpha [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782571|emb|CAQ85735.1| glutamate synthase [nadph] large chain (glutamate synthase alph subunit) (nadph-gogat) (glts alpha chain) [Photorhabdus asymbiotica] Length = 1485 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1050 ETQQALVANGLRHKIRLQIDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E M LG + + +L T L+ Sbjct: 1110 NNCATGVATQDEKLRRDHYHGLPERVMNYFRFIARETREIMAELGVRNLTDLIGRTDLLE 1169 >gi|254450332|ref|ZP_05063769.1| glutamate synthase family protein [Octadecabacter antarcticus 238] gi|198264738|gb|EDY89008.1| glutamate synthase family protein [Octadecabacter antarcticus 238] Length = 467 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 79/228 (34%), Gaps = 30/228 (13%) Query: 85 KTKVAMAVGSQRVMFSDHNA-IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 + +G+ + D + + +LR+ A H + + G A + Sbjct: 166 NCDIVFQIGTAKFGVRDDDGNLDDAKLRKVAAHDQVKMIEIKLAQGAKPGKGGILPAAKI 225 Query: 144 LGADGLFLHLNPLQEIIQPNGN---TNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD- 199 + ++ I PN + ++ DL IA + +P +K V S+ Sbjct: 226 SAEIAEIRGIPEGRDGISPNRHAEVNDWNDLLDFIAHVRDVSGLPTGIKTVMGSESAFAE 285 Query: 200 -----IELGLKSGIRYFDI-AGRGGTSWSRIE-------SHRDLESDIGIVFQDWGIPTP 246 +E G++S + + G GGT + + S R+ + + + G+ Sbjct: 286 FFDTIVERGIESAPDFITLDGGEGGTGAAPMPLIDLVGVSIREALPRVSAMRNECGL--- 342 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + +ASG L N DI ++ GA A F+ Sbjct: 343 ---------RDRIRIVASGKLVNPGDIAWALCAGADFVTSARGFMFSL 381 >gi|260425532|ref|ZP_05779512.1| glutamate synthase [NADPH] large chain [Citreicella sp. SE45] gi|260423472|gb|EEX16722.1| glutamate synthase [NADPH] large chain [Citreicella sp. SE45] Length = 1675 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1186 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKHAGLPWEMG 1241 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1242 LTEAHQVLAMNKLRDRVTLRTDGGLRTGRDIVMAAMMGAEEFGIGTAALIAMGCIMVRQC 1301 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 A+ +D VV I E + +G + + ++ L+ Sbjct: 1302 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYATEVREILASIGARSLNDVIGRADLL 1361 Query: 335 RH 336 R Sbjct: 1362 RQ 1363 >gi|254881743|ref|ZP_05254453.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 4_3_47FAA] gi|294776253|ref|ZP_06741738.1| dihydroorotate oxidase [Bacteroides vulgatus PC510] gi|319643710|ref|ZP_07998326.1| dihydroorotate dehydrogenase [Bacteroides sp. 3_1_40A] gi|254834536|gb|EET14845.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 4_3_47FAA] gi|294449936|gb|EFG18451.1| dihydroorotate oxidase [Bacteroides vulgatus PC510] gi|317384652|gb|EFV65615.1| dihydroorotate dehydrogenase [Bacteroides sp. 3_1_40A] Length = 324 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 103/316 (32%), Gaps = 51/316 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS----- 100 F G L P++ISS + N+ N+ L +A V +V +++M Sbjct: 4 LKTTFAGLSLRNPIIISSSSLTNSAEK---NKKLELAGAGAIVLKSVFEEQIMMEAHHMA 60 Query: 101 ------DHNAIKSF----------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + ++ L + I + ++ + + V Sbjct: 61 TYGSPEGDDYLSTYVRSHALNEYISLIEQTKKLCTIPVIASINCFSNSEWTDFARTVEAA 120 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 GAD L +++ LQ + ++ + + +P+++K + + I Sbjct: 121 GADALEINILSLQTEKEYQYGAFEQRHIDIVSSIKKQISIPVIVKLGSNLTNPIALINQL 180 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG--IPTPLSL-------EMARP 254 +G + R + +I + G TP L +A Sbjct: 181 YANGANAVVLFNR----------FYQPDINIDTMTYSAGDVFSTPADLSNGLRWTAIASA 230 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + SGG+ +G I+K+I+ GAS L S + I + E Sbjct: 231 QVPQTDYAISGGVHDGKAIVKAILAGASAVELCSVIYQRGN-------QVIADMTNEMTQ 283 Query: 315 SMFLLGTKRVQELYLN 330 M G K + E + Sbjct: 284 WMNRQGYKDISEFKSS 299 >gi|110677476|ref|YP_680483.1| glutamate synthase, large subunit [Roseobacter denitrificans OCh 114] gi|109453592|gb|ABG29797.1| glutamate synthase, large subunit [Roseobacter denitrificans OCh 114] Length = 1509 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1021 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1076 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1077 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1136 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + + Sbjct: 1137 QSNTCPVGVCTQDEALREKFTGNADKVVNLITFYASEVREILAQIGARSLDD 1188 >gi|52079609|ref|YP_078400.1| guanosine 5'-monophosphate oxidoreductase [Bacillus licheniformis ATCC 14580] gi|52784972|ref|YP_090801.1| guanosine 5'-monophosphate oxidoreductase [Bacillus licheniformis ATCC 14580] gi|319646598|ref|ZP_08000827.1| GMP reductase [Bacillus sp. BT1B_CT2] gi|57012776|sp|Q65LF6|GUAC_BACLD RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|52002820|gb|AAU22762.1| GMP reductase [Bacillus licheniformis ATCC 14580] gi|52347474|gb|AAU40108.1| GuaC [Bacillus licheniformis ATCC 14580] gi|317391186|gb|EFV71984.1| GMP reductase [Bacillus sp. BT1B_CT2] Length = 326 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 91/278 (32%), Gaps = 39/278 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+F G+ P++ M I+ LA++ + Sbjct: 7 YEDIQLIPAKCIVKSRSECDTSVQFGGRTFKLPVV-------PANMQTIIDEKLAVSLAE 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + + F + L S++ + ++ + L Sbjct: 60 NG-----YFYVMHRFEPETRIDF--IKDMKARGLFSSISVGVKDEEYAFIE-ELTRENLT 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 112 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPDSFVI--AGNVGTPEAVRELEN 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F +S A + Sbjct: 209 GIRTHGDIAKSVRFGATMVMIGSLFAGH-EESPGATIE 245 >gi|309803608|ref|ZP_07697700.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 11V1-d] gi|309805602|ref|ZP_07699645.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 09V1-c] gi|312870729|ref|ZP_07730836.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 3008A-a] gi|312872879|ref|ZP_07732941.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2062A-h1] gi|312875152|ref|ZP_07735165.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2053A-b] gi|315653078|ref|ZP_07906006.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195] gi|329919621|ref|ZP_08276610.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G] gi|308164356|gb|EFO66611.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 11V1-d] gi|308165103|gb|EFO67343.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 09V1-c] gi|311089259|gb|EFQ47690.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2053A-b] gi|311091613|gb|EFQ49995.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2062A-h1] gi|311093741|gb|EFQ52078.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 3008A-a] gi|315489613|gb|EFU79247.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195] gi|328937426|gb|EGG33848.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G] Length = 306 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 18/248 (7%) Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N IA K V +VG + K ++ P LI+++G Q++ + Sbjct: 56 NPQPQIAVMKNGVLNSVGLTNPGVDKVISDKIAPFKEQYPQLPLIASVGGSQISDYITIS 115 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 K +L A + + + G T+ + + + +++P+ +K Sbjct: 116 KKLSDSGLLNALEINVSCPNVAAGGMHLG-TDPVVVEKLTSEIKKVVNIPVYIKLTPNVT 174 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIE-----SHRDLESDIGIVFQDWGIPT--PLS 248 + ++I + G G G S + ++ +G F W P++ Sbjct: 175 NIVEIAQAAERG-------GADGLSMINTLLGLGIDIKTHKATLGNGFGGWSGSAIKPVA 227 Query: 249 LEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + M + I GG+ DI++ ++ GAS + + K + +VA +E Sbjct: 228 VRMVAQVHQAVKLPIIGMGGIETAEDIVEFMLAGASAVAVGTAHFKDGLA-IPHLVADLE 286 Query: 307 SLRKEFIV 314 +L E V Sbjct: 287 TLLNELKV 294 >gi|227827789|ref|YP_002829569.1| dihydroorotate dehydrogenase [Sulfolobus islandicus M.14.25] gi|227459585|gb|ACP38271.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus M.14.25] gi|323474857|gb|ADX85463.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus REY15A] gi|323477598|gb|ADX82836.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus HVE10/4] Length = 290 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + + LI ++G +N + + V V+ + + +N + PN Sbjct: 78 AINEMNVSCPLIVSVGGASIN------EIKEVVKVIESKAKIIEIN----VSSPNRKGYG 127 Query: 169 ADLSSKIALLSSAMD----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 LS+ I + + +P+ +K L+ G F + I Sbjct: 128 ESLSTLIGDIVENVKSVTRLPVFVKLGPWDNVVELAGRALEKGADGFTLINTIRGLIVDI 187 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGAS 282 E+ + + + P++L + R E I GG+ + D++ + +GA Sbjct: 188 ETFKPILYYGTGGVSGRCLY-PVALRIIRDVYEEYGVDIIGVGGVYDWTDVIGMLAVGAK 246 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKE 311 L GL + ++ + + ++S E Sbjct: 247 LVGLGTVLIEKGFSIIEEIRKGLQSYLFE 275 >gi|218778785|ref|YP_002430103.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum alkenivorans AK-01] gi|218760169|gb|ACL02635.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum alkenivorans AK-01] Length = 489 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 26/177 (14%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLL 187 G +A + GA + ++ + + A + + I L + + D+ L+ Sbjct: 222 AVGIGPDMMERAQALWGAGADIILIDA--------SHGHTASIINAIKELKANIKDLELV 273 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 V G + D +++G+ + G+ + + G+P Sbjct: 274 AGNVVTGKGAED---LIEAGVDAVKVGVGPGSICTT------------RIVAGVGVPQVT 318 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 ++ R CN+ IA GG++ D+ K+I GA + F + ++ Sbjct: 319 AIMNCRSACNKHKVPLIADGGIKYSGDVTKAIGAGAHCVMIGGLFAGTEESPGETII 375 >gi|150006350|ref|YP_001301094.1| dihydroorotate dehydrogenase 2 [Bacteroides vulgatus ATCC 8482] gi|149934774|gb|ABR41472.1| putative dihydroorotate dehydrogenase [Bacteroides vulgatus ATCC 8482] Length = 324 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 104/316 (32%), Gaps = 51/316 (16%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF------ 99 F G L P++ISS + N+ N+ L +A V +V +++M Sbjct: 4 LKTTFAGLSLRNPIIISSSSLTNSAEK---NKKLELAGAGAIVLKSVFEEQIMMEAHHMA 60 Query: 100 -----SDHNAIKSF----------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + ++ L + I + ++ + + V Sbjct: 61 TYGSPEGDDYLSTYVRSHALNEYISLIEQTKKLCTIPVIASINCFSNSEWTDFARTVEAA 120 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELG 203 AD L +++ LQ + + ++ + + +P+++K + + I Sbjct: 121 EADALEINILSLQTEKEYQYGSFEQRHIDIVSSIKKQISIPVIVKLGSNLTNPIALINQL 180 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG--IPTPLSL-------EMARP 254 +G + R + +I + G TP L +A Sbjct: 181 YANGANAVVLFNR----------FYQPDINIDTMTYSAGDVFSTPADLSNGLRWTAIASA 230 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIV 314 + + SGG+ +G I+K+I+ GAS L S + A I + E Sbjct: 231 QVPQTDYAISGGVHDGKAIVKAILAGASAVELCSVI---YQRGNQA----IADMTNEMTQ 283 Query: 315 SMFLLGTKRVQELYLN 330 M G K + E + Sbjct: 284 WMNRQGYKDISEFKSS 299 >gi|328542468|ref|YP_004302577.1| glutamate synthase [NADPH] large chain (glutamate synthase alpha subunit) eukaryotic ferredoxin-dependent glutamate synthase 1 (GLU1)-like protein [polymorphum gilvum SL003B-26A1] gi|326412215|gb|ADZ69278.1| Glutamate synthase [NADPH] large chain (Glutamate synthase alpha subunit) eukaryotic ferredoxin-dependent glutamate synthase 1 (GLU1)-like protein [Polymorphum gilvum SL003B-26A1] Length = 1582 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 38/219 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 1031 HSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNVNPAADISVKLVSEVGVGTVAAGVAKAR 1090 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S + S + G+ + + GG Sbjct: 1091 ADHITISGYDGGTGASPLTSIKHAGSP-----WEIGLAETQQTLVLNGLRSRVALQVDGG 1145 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G D+L +LGA G A+ L A + Sbjct: 1146 LRTGRDVLVGALLGADEFGFATAPLIAAGCLMMRKCHLNTCPVGIATQDPVLRKRFKGTP 1205 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V+ + +E M LG R+ ++ T + + Sbjct: 1206 EHVINYFFFVAEELRELMAALGVARLDDIIGRTEFLDKE 1244 >gi|301166970|emb|CBW26549.1| putative 2-nitropropane dioxygenase [Bacteriovorax marinus SJ] Length = 315 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 40/185 (21%) Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHL-------NPLQEIIQPNGNTNFADLS 172 + +GA + D Q+ +A + + L +++ N EI NG F + Sbjct: 43 LGIIGAGSMRPDLLDQQIKKAQSLTN-NSLAVNIPLLYKYANEHIEIALKNGIKIFFTSA 101 Query: 173 SKIALLSSAMDVPLLLKEVGCGL-----SSMDIELGLKSGIRYFDIAG--RGGTSWSRIE 225 + + KE GC + S ++G+ G GG + Sbjct: 102 GSPKKYTQYL------KEKGCIVVHVTSSPELALKCQQAGVDAVVAEGFEAGGHNG---- 151 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 RD T +SL + IA+GG+ +G IL ++ LGA Sbjct: 152 --RDE-------------ITTMSLIPQVVKAVDIPIIAAGGISSGQSILATLALGADAVQ 196 Query: 286 LASPF 290 + S F Sbjct: 197 IGSRF 201 >gi|163794937|ref|ZP_02188906.1| Glutamate synthase (ferredoxin) [alpha proteobacterium BAL199] gi|159179756|gb|EDP64283.1| Glutamate synthase (ferredoxin) [alpha proteobacterium BAL199] Length = 1513 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 32/178 (17%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GG + + + + G+ Sbjct: 1029 RICVKLVASTGIGTIAAGVAKAKADTILISGHGGGTGASP----QTSIKYAGIPWEMGLS 1084 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------- 288 + + GG++ G D++ + +LGA GL + Sbjct: 1085 EVHQVLTLNRLRHSVTLRTDGGIKTGRDVVIAAMLGAEEFGLGTASLVAMGCIMVRQCHS 1144 Query: 289 ---PF--------LKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 P L+ + + + VV + +E + LG + ++++ T L+ Sbjct: 1145 NTCPVGVCTQDESLRAKFEGTPERVVNLFSFVAEEVREILAELGVRSLKDIIGRTDLL 1202 >gi|82702329|ref|YP_411895.1| inosine-5'-monophosphate dehydrogenase [Nitrosospira multiformis ATCC 25196] gi|82410394|gb|ABB74503.1| inosine-5'-monophosphate dehydrogenase [Nitrosospira multiformis ATCC 25196] Length = 486 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 34/217 (15%) Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 R + + + IK+ E +GA + G ++ +A+ G D + + Sbjct: 191 RGLITVKDIIKTSEHPNACKDEQGRLRVGAA-IGVGEGSEERAEALVDAGVDVIVV---- 245 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + + + ++ + + ++ VG ++ + G + Sbjct: 246 ------DTAHGHSQGVLERVRWVKKRFPKIQVIGGNVG---TAAAARALVDHGADAVKVG 296 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVD 272 G+ + + GIP T + A + I+ GG+R D Sbjct: 297 IGPGSICTT------------RIVAGVGIPQITAIKNVSAELAGSGVPLISDGGIRYSGD 344 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 I K++ GAS L ++ IE + Sbjct: 345 IAKALAAGASSI-----MLGGLFAGTEESPGEIELFQ 376 >gi|229028320|ref|ZP_04184452.1| Glutamate synthase, large subunit [Bacillus cereus AH1271] gi|228732989|gb|EEL83839.1| Glutamate synthase, large subunit [Bacillus cereus AH1271] Length = 1478 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ + R+ A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEVAF--RSYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|193212396|ref|YP_001998349.1| inosine-5'-monophosphate dehydrogenase [Chlorobaculum parvum NCIB 8327] gi|209572741|sp|O50316|IMDH_CHLP8 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|193085873|gb|ACF11149.1| inosine-5'-monophosphate dehydrogenase [Chlorobaculum parvum NCIB 8327] Length = 494 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 69/197 (35%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--R 253 + + +K+G + G+ + V G+P ++ Sbjct: 283 TPEAVRDLVKAGADAVKVGIGPGSICTT------------RVVAGVGMPQLTAIMNCAKE 330 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------------------- 291 + IA GG++ DI K++ GA + S F Sbjct: 331 AAKTDTPIIADGGIKYSGDISKALAAGADTVMMGSIFAGTDESPGETILYEGRRFKAYRG 390 Query: 292 --------------------------KPAMDSSDA-------VVAAIESLRKEFIVSMFL 318 K + + + + L SM Sbjct: 391 MGSLGAMSEPEGSSDRYFQDASAETKKYVPEGIEGRIPAKGPLDEVVYQLIGGLKSSMGY 450 Query: 319 LGTKRVQELYLNTALIR 335 G K ++EL NT +R Sbjct: 451 CGVKNIEELKKNTRFVR 467 >gi|23098765|ref|NP_692231.1| guanosine 5'-monophosphate oxidoreductase [Oceanobacillus iheyensis HTE831] gi|45476930|sp|Q8ERJ2|GUAC_OCEIH RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|22776992|dbj|BAC13266.1| GMP reductase [Oceanobacillus iheyensis HTE831] Length = 327 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 91/286 (31%), Gaps = 40/286 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D SV + P++ M I+ +A AE Sbjct: 7 YEDIQLIPAKCVVNSRSECDTSVTLGNRTFKLPVV-------PANMQTIIDEKIAKYLAE 59 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K + + F Q L +++ ++ + A ++ Sbjct: 60 KNYF------YIMHRFEPEKRIDF--IQDMQEYNLFTSISVGVKEEEYTFIEDLAAKQLI 111 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 D + + + +G+++ + I + + + ++ G + + Sbjct: 112 -PDYITIDI--------AHGHSDA--VIKMIKHIKNNLPSSFVI--AGNVGTPEAVRELE 158 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + G W + +L ++ IA Sbjct: 159 NAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIAD 207 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KSI GAS+ + S F + + + +++ Sbjct: 208 GGIRTHGDIAKSIRFGASMVMIGSLFAGHEESPGETIEQDGKKIKE 253 >gi|302690646|ref|XP_003035002.1| hypothetical protein SCHCODRAFT_74235 [Schizophyllum commune H4-8] gi|300108698|gb|EFJ00100.1| hypothetical protein SCHCODRAFT_74235 [Schizophyllum commune H4-8] Length = 2059 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 37/178 (20%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT + R + + G+ Sbjct: 1001 LVSEVGVGIVASGVA---KAKADHILISGHDGGTG-----AARWTGIKSAGLPWELGLAE 1052 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G LR G DI + +LGA G A+ Sbjct: 1053 THQTLVLNDLRGRVTVQTDGQLRTGRDIAIACMLGAEEWGFATAPLIAMGCIMMRKCHLN 1112 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P L+ + V+ L ++ M LG + + E+ T +++ Sbjct: 1113 TCPVGIATQDPQLRAKFAGQPEQVINFFYYLAEDLRAIMAKLGFRTINEMVGRTEMLK 1170 >gi|257093518|ref|YP_003167159.1| inosine-5'-monophosphate dehydrogenase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046042|gb|ACV35230.1| inosine-5'-monophosphate dehydrogenase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 485 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 85/295 (28%), Gaps = 81/295 (27%) Query: 96 RVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP 155 R + + + IK+ E + +GA L G ++ + + G D L + Sbjct: 191 RGLITVKDIIKTTEHPDASKDAAGRLRVGAA-LGVGPGTEERAELLAEAGVDVLVV---- 245 Query: 156 LQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG-LKSGIRYFDIA 214 + + + ++ + L++ +G +++ D L G + Sbjct: 246 ------DTAHGHSQGVLDRVRWVKRNFP---LVEVIGGNIATADAARAMLDHGADGVKVG 296 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVD 272 G+ + + G+P +++M + IA GG+R D Sbjct: 297 IGPGSICTT------------RIVAGVGVPQITAIQMVFDALQGSGVPLIADGGIRYSGD 344 Query: 273 ILKSIILGASLGGLASPFL----------------------------------------- 291 I K+I G L F Sbjct: 345 ISKAIAAGGDAVMLGGLFAGTEEAPGEVELYQGRSYKSYRGMGSIGAMAAGAADRYFQDT 404 Query: 292 ----KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + V+A I L SM LG + + E++ + + Sbjct: 405 ATLDKLVPEGIEGRVPYKGSVLAVIHQLMGGLRSSMGYLGCRTIAEMHDKASFVE 459 >gi|227888750|ref|ZP_04006555.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii ATCC 33200] gi|227850587|gb|EEJ60673.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii ATCC 33200] Length = 324 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 82/268 (30%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D ++F + P++ M I+ +LAI + Sbjct: 6 YDDIQLVPNKCIIKSRSEADTGIKFGSRTFKIPVV-------PANMESVIDEDLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNYDFGVQKAHQAVHV 143 + F + L +++ G YDF A + Sbjct: 59 NG-----YYYVMHRFYPEKRADF--IKMMHDKGLFASISVGIKDSEYDFIDYLAKE---- 107 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 N + E + +D + I + + L G + + Sbjct: 108 ----------NIIPEYTTIDVAHGHSDYVIKMIKYIKEKLPDTFLT--AGNIATPEAVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M + I Sbjct: 156 LENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLI 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R+ DI KS+ GAS+ + S F Sbjct: 205 ADGGIRHNGDIAKSVRFGASMVMIGSLF 232 >gi|126740810|ref|ZP_01756495.1| glutamate synthase family protein [Roseobacter sp. SK209-2-6] gi|126718106|gb|EBA14823.1| glutamate synthase family protein [Roseobacter sp. SK209-2-6] Length = 496 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 21/166 (12%) Query: 142 HVLGADGLFLHLNP-LQEIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + A+ + P Q I PN + +F L +A + P+ +K V + S Sbjct: 246 EKVNAEIAKIRGIPEGQASISPNRHPEIEDFDGLLDMVAHIREVSGKPVGIKTV---IGS 302 Query: 198 MDIELGL--------KSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 L + + I G GGT + + + + P + Sbjct: 303 EAAARELFFNIAARPEDAPDFVTIDGGEGGTGAAPMPLIDLVGMSVREAL-----PLVCN 357 Query: 249 LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 L + + IASG L N DI ++ GA A F+ Sbjct: 358 LRDEYGLHDRIRVIASGKLVNPGDIAWALAAGADFVTSARGFMFSL 403 >gi|56698098|ref|YP_168469.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3] gi|56679835|gb|AAV96501.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3] Length = 528 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 30/227 (13%) Query: 86 TKVAMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + +G+ + D S + LR+ A H + + G A + Sbjct: 201 ADIVFQIGTAKFGVRDAEGNLSDDKLREVAAHPQVKMFEIKLSQGAKPGKGGILPAAK-I 259 Query: 145 GADGLFLHLNPL-QEIIQPNGNT---NFADLSSKIALLSSAMDVPLLLKEV-GCGLSSMD 199 A+ + P+ + I PN + +F L IA L P+ +K G D Sbjct: 260 DAEISQIRGVPMGMDAISPNRHREVDDFDGLLDLIAHLREVTGKPVGIKTCMGSADPWFD 319 Query: 200 I-----ELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL---- 249 E G S + + G GGT + + G+P +L Sbjct: 320 FFRRIRERGADSAPDFITVDGGEGGT-----------GAAPMPLIDLVGLPLREALIRMV 368 Query: 250 --EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + +ASG L D+ +I LGA A F+ Sbjct: 369 DLRDLSGLHDRIRIVASGKLVAPGDVAWAICLGADFITSARGFMFSL 415 >gi|58260322|ref|XP_567571.1| glutamate synthase (NADH) [Cryptococcus neoformans var. neoformans JEC21] gi|134116226|ref|XP_773284.1| hypothetical protein CNBJ0620 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255906|gb|EAL18637.1| hypothetical protein CNBJ0620 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229621|gb|AAW46054.1| glutamate synthase (NADH), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 2135 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + +K+ + I+G GGT ++ + + G+ Sbjct: 1044 LVSEVGVGIVASGV---VKAKADHITISGHDGGTGAAK-----WTSIKYAGLPWELGLAE 1095 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G +R G DI + +LGA G A+ Sbjct: 1096 THQTLVLNNLRGRVTVQTDGQIRTGRDIAIATLLGAEEWGFATTPLIAMGCIMMKACHKN 1155 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ + V+ + +E M LG + + E+ Sbjct: 1156 TCPVGIATQDPALRAKFAGQPEQVINFFYYVIEELRQIMAKLGFRTINEM 1205 >gi|218677626|ref|ZP_03525523.1| L-lactate dehydrogenase (cytochrome) protein [Rhizobium etli CIAT 894] Length = 68 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 270 GVDILKSIILGASLGGLASPFLKPA-MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 G D+LK++ LGA + PFL + V A+ +RKE ++M L G + + + Sbjct: 1 GQDVLKAVALGAKGTYIGRPFLYGLGAMGKEGVSLALSIIRKEMDITMALCGKRDIND-- 58 Query: 329 LNTALIRHQ 337 +N ++I + Sbjct: 59 VNASIISGR 67 >gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5] gi|13878566|sp|Q9UY49|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5] Length = 485 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 121/376 (32%), Gaps = 83/376 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLISSM----------TGGNNKMIER 74 FDD LI +A E+ +VD S + KL+ P+L ++M + Sbjct: 17 FDDVLLIPQA-TEVEPKDVDVSTQITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGV 75 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSD-----HNAIKSFEL----RQYAPHTVLISNLGA 125 I+RN++I + +V ++R + D F L + ++ N Sbjct: 76 IHRNMSIEEQVEQVKRVKKAERFIVEDVITISPEETVDFALFLMEKHDIDGLPVVENEKV 135 Query: 126 VQL--NYDFGVQKAHQAVHVLGADGLFLHLN-PLQEI--IQPNGNTNFADLSSK------ 174 V + D ++ ++ D + + N ++E I + + K Sbjct: 136 VGIISKKDIAAREGKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIG 195 Query: 175 ---IALLSSAMDVPLLLKE------VGCGLSSMDIELGLK---SGIRYFDIAGRGGTSWS 222 ++ L + +++ V +S DI ++ +G + + Sbjct: 196 LITMSDLVARKKYKNAVRDENGELLVAAAVSPFDIRRAIELDRAGADVIVVDTAHAHNLK 255 Query: 223 RIESHRDLESDIGIVF-----------------------------------QDWGIP--T 245 I++ +++ + F G+P T Sbjct: 256 AIKAMKEMRQKVDADFIVGNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQIT 315 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 +++ R IA GG++ DI+K+I GA L + L + I Sbjct: 316 AIAMVADRAQEYGLYVIADGGIKYSGDIVKAIAAGADAVMLGN--LLAGTKEAPGKEVII 373 Query: 306 ESLRKEFIVSMFLLGT 321 + + M LG Sbjct: 374 NGRKYKQYRGMGSLGA 389 >gi|327472856|gb|EGF18283.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK408] Length = 312 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILAEAFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G K +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITTELRAIMEEKGYKNLEDFR 304 >gi|296810234|ref|XP_002845455.1| glutamate synthase [Arthroderma otae CBS 113480] gi|238842843|gb|EEQ32505.1| glutamate synthase [Arthroderma otae CBS 113480] Length = 2116 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 63/217 (29%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1039 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAK 1098 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + IAG GGT + R + + G+ + G Sbjct: 1099 ADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1153 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G DI + +LGA G A+ L S Sbjct: 1154 LRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDPVLREKFQGSP 1213 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + E M LG + + E+ L++ Sbjct: 1214 EHVINFFYYIANELRAIMAKLGFRSINEMVGRAELLK 1250 >gi|167747123|ref|ZP_02419250.1| hypothetical protein ANACAC_01836 [Anaerostipes caccae DSM 14662] gi|317473664|ref|ZP_07932952.1| glutamine amidotransferase class-II [Anaerostipes sp. 3_2_56FAA] gi|167654083|gb|EDR98212.1| hypothetical protein ANACAC_01836 [Anaerostipes caccae DSM 14662] gi|316898855|gb|EFV20881.1| glutamine amidotransferase class-II [Anaerostipes sp. 3_2_56FAA] Length = 1510 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 32/184 (17%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + D + +K V K+G + I+G G + + + + Sbjct: 1007 ANRDARISVKLVSEAGVGTVASGVAKAGAQVILISGYDGGTGAAPRNSIYN----AGLPW 1062 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 + G+ + N+ G L +G D+ + +LGA G A+ L Sbjct: 1063 ELGLAEAHQNLIMNDLRNKVVLETDGKLMSGRDVAIAAMLGAEEFGFATAPLVTLGCVMM 1122 Query: 292 --------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K + VV + + +E M LG + EL T Sbjct: 1123 RVCNLDTCPVGVATQNPELRKRFAGKPEYVVNFMRFIAQELREYMAKLGVATIDELVGRT 1182 Query: 332 ALIR 335 L++ Sbjct: 1183 DLLK 1186 >gi|229165467|ref|ZP_04293251.1| Glutamate synthase, large subunit [Bacillus cereus AH621] gi|228618065|gb|EEK75106.1| Glutamate synthase, large subunit [Bacillus cereus AH621] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANHLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|210135048|ref|YP_002301487.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori P12] gi|210133016|gb|ACJ08007.1| guanosine 5'-monophosphate oxidoreductase in purine nucleotides salvage [Helicobacter pylori P12] Length = 335 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 86/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN +A AE Sbjct: 16 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINEPIAEFLAE 68 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + +LI L L D+ Sbjct: 69 NGYFYIMHRFNGSTRIPFVKKMKERQLISSISVGVKKEEYLLIEELAKQGLTPDY----- 123 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 124 ------ITIDIAHGHSNSVIEMIQ---------------RIKTRLPETFVI--AGNVGTP 160 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 161 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 210 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 211 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 255 >gi|328463907|gb|EGF35425.1| inosine-5-monophosphate dehydrogenase [Lactobacillus helveticus MTCC 5463] Length = 380 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 81/280 (28%), Gaps = 45/280 (16%) Query: 16 DPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKM 71 D + FDD LI LP +EVD S + KL+ PL+ + M Sbjct: 5 DTKFAKKGLTFDDVLLIPAESHVLP----NEVDLSTKLADNIKLNIPLVSAGM------- 53 Query: 72 IERINRNLAIAAEKT--KVAMAVGSQRVMFSDHNAIKSFELR---QYAPHTVLISNLGAV 126 + + A + + + + + V N Sbjct: 54 -DTVTEGAMAIAMALQGGLGVVHKNMSIQAQAGEVANVKSVVVPSNTTKAAVDDQNRLLC 112 Query: 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL 186 +A +L A + ++ + + A + KI + Sbjct: 113 AAAVGVTSDTFERAEALLEAGADAIVIDTA--------HGHSAGVLRKIKEIRDHFPKQT 164 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 L+ G + +G+ AG G S + G+P Sbjct: 165 LI--AGNVATGDATRALFDAGVDVVK-AGIGPGSICTTR-----------IVAGVGVPQI 210 Query: 247 LSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 ++ A E IA GG++ D++K++ G + Sbjct: 211 TAIYDAASAAREYHKPIIADGGIKYSGDVVKALAAGGNAV 250 >gi|269120169|ref|YP_003308346.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC 33386] gi|268614047|gb|ACZ08415.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC 33386] Length = 486 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 34/206 (16%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D + I ++ H L +GA G + ++ A + ++ Sbjct: 194 ITIKDIDNIINYPNAAKDEHGRL--RVGAA---VGIGKDTVDRISALVKAGVDVVTVDSA 248 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + I + L+ G ++ +K+G+ + Sbjct: 249 --------HGHSKGVVEAIKKIRKKFPKLDLIG--GNIVTKEAAADLIKAGVDAVKVGIG 298 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDIL 274 G+ + V G+P ++ YC E IA GG+ DI+ Sbjct: 299 PGSICTT------------RVVSGVGVPQVSAVMEVYDYCKKHEVSVIADGGITLSGDIV 346 Query: 275 KSIILGASLGGLASPFLKPAMDSSDA 300 K+I GA L + ++ Sbjct: 347 KAIASGADCV-----MLGSLLAGTEE 367 >gi|30023481|ref|NP_835112.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus ATCC 14579] gi|206970187|ref|ZP_03231140.1| guanosine monophosphate reductase [Bacillus cereus AH1134] gi|218233488|ref|YP_002370230.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus B4264] gi|228911293|ref|ZP_04075097.1| GMP reductase [Bacillus thuringiensis IBL 200] gi|228924199|ref|ZP_04087470.1| GMP reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228955705|ref|ZP_04117700.1| GMP reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229051124|ref|ZP_04194668.1| GMP reductase [Bacillus cereus AH676] gi|229072919|ref|ZP_04206115.1| GMP reductase [Bacillus cereus F65185] gi|229112868|ref|ZP_04242399.1| GMP reductase [Bacillus cereus Rock1-15] gi|229130701|ref|ZP_04259654.1| GMP reductase [Bacillus cereus BDRD-Cer4] gi|229148340|ref|ZP_04276623.1| GMP reductase [Bacillus cereus BDRD-ST24] gi|229153613|ref|ZP_04281790.1| GMP reductase [Bacillus cereus m1550] gi|229181701|ref|ZP_04309024.1| GMP reductase [Bacillus cereus 172560W] gi|229193705|ref|ZP_04320646.1| GMP reductase [Bacillus cereus ATCC 10876] gi|296505876|ref|YP_003667576.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis BMB171] gi|45476882|sp|Q814I1|GUAC_BACCR RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|29899042|gb|AAP12313.1| GMP reductase [Bacillus cereus ATCC 14579] gi|206734764|gb|EDZ51933.1| guanosine monophosphate reductase [Bacillus cereus AH1134] gi|218161445|gb|ACK61437.1| GMP reductase [Bacillus cereus B4264] gi|228589730|gb|EEK47608.1| GMP reductase [Bacillus cereus ATCC 10876] gi|228601734|gb|EEK59232.1| GMP reductase [Bacillus cereus 172560W] gi|228629842|gb|EEK86494.1| GMP reductase [Bacillus cereus m1550] gi|228635134|gb|EEK91681.1| GMP reductase [Bacillus cereus BDRD-ST24] gi|228652718|gb|EEL08603.1| GMP reductase [Bacillus cereus BDRD-Cer4] gi|228670547|gb|EEL25860.1| GMP reductase [Bacillus cereus Rock1-15] gi|228710165|gb|EEL62143.1| GMP reductase [Bacillus cereus F65185] gi|228722187|gb|EEL73588.1| GMP reductase [Bacillus cereus AH676] gi|228803933|gb|EEM50557.1| GMP reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228835417|gb|EEM80787.1| GMP reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228848311|gb|EEM93161.1| GMP reductase [Bacillus thuringiensis IBL 200] gi|296326928|gb|ADH09856.1| guanosine 5'-monophosphate oxidoreductase [Bacillus thuringiensis BMB171] Length = 328 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 88/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 T +A + SF +R ++ S +G + Y+F Q A + Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQLAAEQLTPE 114 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + + I + + ++ G + + Sbjct: 115 YITIDIAHGHSNA---------------VINMIQHIKKHLPESFVI--AGNVGTPEAVRE 157 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 158 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 206 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R D+ KSI GA++ + S F + + + ++ Sbjct: 207 ADGGIRTHGDVAKSIRFGATMVMIGSLFAGHEESPGETIERDGKLYKE 254 >gi|312216840|emb|CBX96789.1| similar to glutamate synthase [Leptosphaeria maculans] Length = 2142 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1045 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSETGVGIVASGVAKAK 1104 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1105 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1159 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1160 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFTGTP 1219 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + ++ Sbjct: 1220 EHVINFFYYIANELRAIMAKLGYRTINDM 1248 >gi|154293978|ref|XP_001547433.1| glutamate synthase (NADPH) [Botryotinia fuckeliana B05.10] gi|150845140|gb|EDN20333.1| glutamate synthase (NADPH) [Botryotinia fuckeliana B05.10] Length = 2101 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + +K V + K+ Sbjct: 1044 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCANPRSRVSVKLVSETGVGIVASGVAKAK 1103 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1104 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1158 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1159 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFQGTP 1218 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1219 EHVINFFYYIANELRAIMAKLGFRTINEM 1247 >gi|184200325|ref|YP_001854532.1| inosine 5-monophosphate dehydrogenase [Kocuria rhizophila DC2201] gi|183580555|dbj|BAG29026.1| IMP dehydrogenase family protein [Kocuria rhizophila DC2201] Length = 373 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 64/204 (31%), Gaps = 57/204 (27%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + +DVP++ VG +++G + GG S R ES + + + Sbjct: 183 LKQFIYDLDVPVI---VGGAAGYTPALHLMRTGAAGVLVGFGGGASL-RTESILGIHAAM 238 Query: 235 GIVFQDWGIPTPLS-LEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 T +S + AR + IA GGL DI+K+I +GA + Sbjct: 239 A---------TAISDVAAARRDYLDESGGRYVHVIADGGLGTSGDIVKAIAMGADAV-ML 288 Query: 288 SPFLKPAMD--------SSDA--------------VVAAIESLRK--------------E 311 L A + ++A V ++ L Sbjct: 289 GTLLARAEEAPGQGWLWGAEAHNPHSPRGVRTHVGTVGPLDELLNGPSRHVDGSSNVMGA 348 Query: 312 FIVSMFLLGTKRVQELYLNTALIR 335 +M G ++E +IR Sbjct: 349 LRRAMATTGYSDLKEFQRAEVVIR 372 >gi|330830106|ref|YP_004393058.1| glutamate synthase [NADPH] large chain [Aeromonas veronii B565] gi|328805242|gb|AEB50441.1| Glutamate synthase [NADPH] large chain [Aeromonas veronii B565] Length = 1485 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT S + S + S + + Sbjct: 995 VSVKLVSEPGVGTIACGVAKAYADFITISGYDGGTGASPLTSVKYAGSPWELGLAE---- 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 T +L +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 TQQAL-VANGLRHKVRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + + +E M LG ++ +L T L+ Sbjct: 1110 NNCATGVATQDEKLRREHFTGLPEMVMNYFKFIAEETRELMAQLGVTQLTDLIGRTDLLE 1169 >gi|229083766|ref|ZP_04216085.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-44] gi|228699536|gb|EEL52202.1| Glutamate synthase, large subunit [Bacillus cereus Rock3-44] Length = 1479 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 27/258 (10%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQR 96 V K P +ISSM+ G+ I R A AA++ + +G Sbjct: 831 RVSIGIKDHDLPFIISSMSFGSQNEIAF--RAYAEAADRLNMISLNGEGGEIKDMIGKYP 888 Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNP- 155 A F + + SNL +++ + + N Sbjct: 889 RTRGQQIASGRFGV---NAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTSKIAEARNAT 945 Query: 156 -LQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRY 210 ++I P+ N + DL+ I + +A + + +V + I + K+G + Sbjct: 946 IGSDLISPSNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADF 1005 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 +I+G GGT +RI + + + + + G+ + + + + A GG+R+ Sbjct: 1006 INISGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHNVEIWADGGIRS 1060 Query: 270 GVDILKSIILGASLGGLA 287 D LK ++LGA+ G Sbjct: 1061 VNDALKIMLLGANRIGFG 1078 >gi|116075718|ref|ZP_01472977.1| Glutamate synthase (NADPH) [Synechococcus sp. RS9916] gi|116067033|gb|EAU72788.1| Glutamate synthase (NADPH) [Synechococcus sp. RS9916] Length = 1513 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 34/182 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K V K+ I+G GGT S + S + + G+ Sbjct: 1031 PVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSIKHAGGP-----WELGL 1085 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS--------------- 288 + + A GGL+ G D++ + +LGA G S Sbjct: 1086 TEVHRALLENGLRDRVLLRADGGLKTGWDVVIAALLGAEEYGFGSIAMIAEGCVMARVCH 1145 Query: 289 ----PF--------LKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P L+ + VV + +E M LLG R++EL T L++ Sbjct: 1146 TNNCPVGVATQKENLRKRFTGVPEHVVNFFWYVAEEVRQLMSLLGVTRLEELIGRTDLLK 1205 Query: 336 HQ 337 + Sbjct: 1206 PR 1207 >gi|323217153|gb|EGA01874.1| L-lactate oxidase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] Length = 209 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 14/144 (9%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N + FD +++ R L I E+D S + LG L P++ + M Sbjct: 64 AEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLLGIPLKTPIIQAPMA------A 117 Query: 73 ERINRNLAIAAEKTKVAMAVGS--QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 + + A +A VGS + + + + P + Q N Sbjct: 118 QGLAHASGELATAKGMAQ-VGSIFSLSTYGNKTIEEVANVSGKNPFFFQLYMSKNNQFNE 176 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN 154 Q GA + L ++ Sbjct: 177 FILAQAVKH-----GAKAIILTVD 195 >gi|117165070|emb|CAJ88623.1| putative hihydroorotate dehydrogenase [Streptomyces ambofaciens ATCC 23877] Length = 297 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 21/280 (7%) Query: 47 SVEFLGKKLSFPLLISS--MT------------GGNNKMIERINRNLAIAAEK--TKVAM 90 + LG +LS P+++ S +T G + + + I+ + A E+ ++ Sbjct: 4 TARILGLRLSSPVVVGSGLLTDQERNIRRLFDDGASAVVTKTIHPDPGPAGEERLLRLPT 63 Query: 91 AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF 150 + + LR++A + + +V + + V G+ L Sbjct: 64 GMLNSTTYSRRPVGDWCAMLRRFADDG--LPVIASVHAESPDELAELADLVGQAGSPALE 121 Query: 151 LHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 L ++ L E + +++ + VP +K +E L G Sbjct: 122 LGISCLNE--GGGLDDTPERVAAYTDAVRRRTPVPFSVKLAAGERLRERVEAALACGADA 179 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 ++ G + L G + R +ASGG+ N Sbjct: 180 ITLSDTVAGLAVDADTGEVRLGGAFGYSGAGIKPLVLAEIFGLRRAGLTVPVMASGGVEN 239 Query: 270 GVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 G D+ + + +GA + + + + A+ + Sbjct: 240 GRDVAEYLSVGADAVQVYTALHREMHATLRAIRRGFDEWL 279 >gi|332308097|ref|YP_004435948.1| Glutamate synthase (ferredoxin) [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175426|gb|AEE24680.1| Glutamate synthase (ferredoxin) [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1488 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+ I+G GGT S + S + S + + Sbjct: 996 QISVKLVSEPGVGTIATGVAKAYADLITISGYDGGTGASPLTSVKYAGSPFELGLAE--- 1052 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS----- 297 T +L ++ + GGL+ G+D++K ILGA G P + Sbjct: 1053 -TQQALVE-NGLRHKVRVQTDGGLKTGLDVVKGAILGAESFGFGTGPMVALGCKYLRICH 1110 Query: 298 -----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V+ + + +E M +G ++ +L T L+ Sbjct: 1111 LNNCATGVATQDEKLRENYFIGLPEMVMNYFKFIAEEVREIMASIGVTKLDDLIGRTELL 1170 Query: 335 R 335 Sbjct: 1171 E 1171 >gi|311693373|gb|ADP96246.1| glutamate synthase subunit alpha [marine bacterium HP15] Length = 1482 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 37/173 (21%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT+ S + S R S + G+ Sbjct: 996 VSVKLVSEPGVGTIAAGVAKAYADLITVSGYDGGTAASPLTSIRYAGSP-----WELGLT 1050 Query: 245 -TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------ 291 T +L A + + GGL+ G+D++K ILGA G + + Sbjct: 1051 ETQQALR-ANDLRGKIRLQTDGGLKTGLDVVKGAILGAESFGFGTTPMVALGCKYLRICH 1109 Query: 292 -----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + + + +E M LG + ++EL Sbjct: 1110 LNNCATGVATQNDHLREEHFKGTVEMAMNFFRFVAEETREWMAKLGVRTLEEL 1162 >gi|251782877|ref|YP_002997180.1| dihydroorotate dehydrogenase 1A [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391507|dbj|BAH81966.1| dihydroorotate dehydrogenase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 315 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 19/204 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + + PL +K Sbjct: 114 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 173 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 174 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 231 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 232 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 284 Query: 305 IESLRKEFIVSMFLLGTKRVQELY 328 E + KE M G + + + Sbjct: 285 FERVTKELKTIMVEKGYQSLDDFR 308 >gi|228963612|ref|ZP_04124764.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228796070|gb|EEM43526.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 LPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|229159614|ref|ZP_04287628.1| Glutamate synthase, large subunit [Bacillus cereus R309803] gi|228623916|gb|EEK80728.1| Glutamate synthase, large subunit [Bacillus cereus R309803] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|257878300|ref|ZP_05657953.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,230,933] gi|257880918|ref|ZP_05660571.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,502] gi|257889499|ref|ZP_05669152.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,410] gi|257892560|ref|ZP_05672213.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,408] gi|258616179|ref|ZP_05713949.1| dihydroorotate dehydrogenase 1A [Enterococcus faecium DO] gi|260559851|ref|ZP_05832030.1| dihydroorotate dehydrogenase 1 [Enterococcus faecium C68] gi|293552751|ref|ZP_06673412.1| dihydroorotate dehydrogenase [Enterococcus faecium E1039] gi|293559680|ref|ZP_06676208.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1162] gi|293569924|ref|ZP_06681011.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1071] gi|294615209|ref|ZP_06695090.1| dihydroorotate dehydrogenase [Enterococcus faecium E1636] gi|294620017|ref|ZP_06699382.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1679] gi|294620770|ref|ZP_06699976.1| dihydroorotate dehydrogenase a [Enterococcus faecium U0317] gi|257812528|gb|EEV41286.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,230,933] gi|257816576|gb|EEV43904.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,502] gi|257825859|gb|EEV52485.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,410] gi|257828939|gb|EEV55546.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,408] gi|260074075|gb|EEW62398.1| dihydroorotate dehydrogenase 1 [Enterococcus faecium C68] gi|291587672|gb|EFF19549.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1071] gi|291591933|gb|EFF23561.1| dihydroorotate dehydrogenase [Enterococcus faecium E1636] gi|291593739|gb|EFF25248.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1679] gi|291599627|gb|EFF30638.1| dihydroorotate dehydrogenase a [Enterococcus faecium U0317] gi|291603060|gb|EFF33251.1| dihydroorotate dehydrogenase [Enterococcus faecium E1039] gi|291606355|gb|EFF35761.1| dihydroorotate dehydrogenase a [Enterococcus faecium E1162] Length = 314 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 100/327 (30%), Gaps = 52/327 (15%) Query: 45 DPSVEFLGKKLSFPLLISS----MT------GGNNKMIERINRNLAIAAEKTK------- 87 F + PL+ +S MT +++ I ++ I K Sbjct: 2 SLETTFANHIFANPLMNASGVHCMTTQELDELAHSEAGAFITKSCTINERKGNPEPRYFD 61 Query: 88 VAMA----VGSQRVMFSDH-NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V + +G + FS + ++E Q + L ++ VQ+ + + Sbjct: 62 VPLGSINSMGLPNLGFSYYLEYALAYEKVQENQNQPLFFSI------AGMSVQENLEMLE 115 Query: 143 VLGADGL----FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGL 195 + G L+L+ +P +F + + S PL +K Sbjct: 116 KIEKSGFNGITELNLSCPNVPGKPQLAYDFEATYETLKEVFSIFSKPLGIKLPPYFDFAH 175 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTPLSLEM 251 ++ + + Y + G + F G PT L Sbjct: 176 FDQMADILNQFPLTYVNAINSVGNGLYIDTEQEAVVIKPKEGFGGIGGEYIKPTA--LAN 233 Query: 252 ARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 R + E Q I +GG+R G D + ++ GAS+ + + K + + Sbjct: 234 VRAFYTRLKPEIQIIGTGGIRTGQDAFEHLLCGASMLQIGTELHK---EGPE----IFSR 286 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALI 334 + KE M G + E I Sbjct: 287 IIKELTQIMSEKGYTSIDEFKGKLRTI 313 >gi|145612527|ref|XP_367262.2| hypothetical protein MGG_07187 [Magnaporthe oryzae 70-15] gi|145019674|gb|EDK03902.1| hypothetical protein MGG_07187 [Magnaporthe oryzae 70-15] Length = 2126 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1042 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSETGVGIVASGVAKAK 1101 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1102 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1156 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1157 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFKGTP 1216 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1217 EHVINFFYYIANELRAIMAKLGFRTINEM 1245 >gi|144898753|emb|CAM75617.1| glutamate synthase(NADPH) large subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 1509 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 63/217 (29%), Gaps = 39/217 (17%) Query: 149 LFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI 208 + + P +I +I ++ + +K V K+ Sbjct: 994 MLISPPPHHDIYSIEDLAQLIYDLKQINPIAK-----VTVKLVSRSGIGTIAAGVAKAKA 1048 Query: 209 RYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 I+G GGT S + + G+ + + + GGL Sbjct: 1049 DIILISGNVGGTGASP-----QTSIKFAGLPWELGLSEAHQVLTLNRLRHRVKLRTDGGL 1103 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSSD 299 + G DI+ + +LGA G+ + L S + Sbjct: 1104 KTGRDIVIAAMLGAEEFGIGTTSLIALGCIMVRQCHSNTCPVGVCTQDPALRAKFTGSPE 1163 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 VV + +E + LG + + E+ T L+ Sbjct: 1164 KVVNLFSFIAEEVREILASLGVRSLNEIIGRTDLLSQ 1200 >gi|319647531|ref|ZP_08001751.1| YrpB protein [Bacillus sp. BT1B_CT2] gi|317390379|gb|EFV71186.1| YrpB protein [Bacillus sp. BT1B_CT2] Length = 332 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 82/263 (31%), Gaps = 56/263 (21%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI--KSFEL 110 LS P++ + M GG LA A +G + + + E Sbjct: 8 LSLSKPVIQAPMAGG------PTTPRLAAAVSDCG---GLGGLASGYLTPEVLRQQILET 58 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 ++ + NL + ++ + L +P+ + Q ++ D Sbjct: 59 KKLTSAGFQV-NLFIPEKRETVSREEYEGWQEKI---PLAHSASPVTDERQ-----DWGD 109 Query: 171 LSSKIALL----SSAMDVPLL------LKE--------VGCGLSSMDIELGLKSGIRYFD 212 KI ++ SA+ +KE +G +S + L + G+ Sbjct: 110 FYEKIEIILKEGISAVSFTFGPPPADAVKELKDRNCCLIGTAVSVEEAVLLEELGMDVIV 169 Query: 213 IAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTP--LSLEMARPYCNEAQFIASGGLR 268 + G GG G + G P +SL IA+GG+ Sbjct: 170 VQGSEAGG--------------HRGAFLKTKGEPAVGSMSLIPQAADHVSVPVIAAGGIF 215 Query: 269 NGVDILKSIILGASLGGLASPFL 291 + + + LGA + + FL Sbjct: 216 DKRGVAAAFALGAQGVQIGTAFL 238 >gi|317051563|ref|YP_004112679.1| glutamate synthase [Desulfurispirillum indicum S5] gi|316946647|gb|ADU66123.1| Glutamate synthase (ferredoxin) [Desulfurispirillum indicum S5] Length = 1481 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 34/173 (19%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ I+G GGT ++ S + Sbjct: 1006 DARVSVKLVSSAGVGTIAAGVAKAYADKIIISGSDGGTGAAQYASI-----KFAGNPWEI 1060 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------- 291 G+ + A + GGL+ G D++K+ ++GA G + L Sbjct: 1061 GLTEAHNALKANNLRQMVELQTDGGLKTGRDVVKAALMGAESYGFGTSLLAILGCKLLRV 1120 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 + + D VVA + ++ ++ + LG + +QE Sbjct: 1121 CHLNRCSVGIATQSDQLREHYQGTVDKVVAYLTNVAEDVREILASLGLRSLQE 1173 >gi|75759489|ref|ZP_00739580.1| Glutamate synthase [NADPH] large chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899210|ref|ZP_04063479.1| Glutamate synthase, large subunit [Bacillus thuringiensis IBL 4222] gi|74493017|gb|EAO56142.1| Glutamate synthase [NADPH] large chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228860424|gb|EEN04815.1| Glutamate synthase, large subunit [Bacillus thuringiensis IBL 4222] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 LPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|119505544|ref|ZP_01627616.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2080] gi|119458653|gb|EAW39756.1| Glutamate synthase domain 2 [marine gamma proteobacterium HTCC2080] Length = 1494 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 35/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + + Sbjct: 1009 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRHAGSPWELGLAEVHQT 1068 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + + A GG++ G+D++K+ ILGA G +P + Sbjct: 1069 -----LRGNRLRGKIRVQADGGMKTGLDVIKAAILGAESFGFGTAPMVAMGCKYLRICHL 1123 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + ++ V+ + +E + LG R+++L T L++ Sbjct: 1124 NNCATGVATQNAVLREEHFNGDAERVINFFNFVARETREWLAKLGVCRLEDLIGRTDLLK 1183 Query: 336 H 336 Sbjct: 1184 R 1184 >gi|84514708|ref|ZP_01002072.1| Glutamine-pyruvate aminotransferase [Loktanella vestfoldensis SKA53] gi|84511759|gb|EAQ08212.1| Glutamine-pyruvate aminotransferase [Loktanella vestfoldensis SKA53] Length = 1511 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 47/169 (27%), Gaps = 32/169 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1026 VTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----GTSIKYAGLPWEMGLTE 1081 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + GGLR G DI+ + +LGA G+ + L Sbjct: 1082 AHQVLAMNNLRERITLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSN 1141 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +++ VV I E + +G + + + Sbjct: 1142 TCPVGVCTQDDALRAKFTGNAEKVVNLITFYATEVREILASIGARSLDD 1190 >gi|227547310|ref|ZP_03977359.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212269|gb|EEI80165.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 417 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S +++ Sbjct: 222 NLKKFIYDLDVPVI---VGGASNYTAALHLMRTGAAGVLV-GFGGGAVSATRQTIGVQAP 277 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K++ LGA L Sbjct: 278 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLG 329 Query: 288 SPFLKP 293 +P + Sbjct: 330 APLARA 335 >gi|55663515|emb|CAH70570.1| dihydropyrimidine dehydrogenase [Homo sapiens] gi|55962906|emb|CAI15125.1| dihydropyrimidine dehydrogenase [Homo sapiens] Length = 1025 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 110/361 (30%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 A+ +P K + I K GG + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSDGT 749 Query: 240 DW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 W G+ T + ++ +A+GG+ + L+ + G Sbjct: 750 PWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSG 809 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V IE ++L K ++EL + A + H Sbjct: 810 ASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSH 859 Query: 337 Q 337 Q Sbjct: 860 Q 860 >gi|154151258|ref|YP_001404876.1| inosine-5'-monophosphate dehydrogenase [Candidatus Methanoregula boonei 6A8] gi|153999810|gb|ABS56233.1| inosine-5'-monophosphate dehydrogenase [Methanoregula boonei 6A8] Length = 489 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 17/122 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + +++ ++ G +S E L +G+ + G+ + Sbjct: 257 VVEAVKNIKGSVNAEVIA---GNIATSSAAEALLDAGVDGIKVGIGPGSICTT------- 306 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P ++ + IA GG+R D+ K++ GA + S Sbjct: 307 -----RIVAGTGVPQITAIAQVADVASPAGVPVIADGGVRYSGDVAKALAAGADTVMMGS 361 Query: 289 PF 290 F Sbjct: 362 MF 363 >gi|71907957|ref|YP_285544.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica RCB] gi|71847578|gb|AAZ47074.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica RCB] Length = 487 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 113/374 (30%), Gaps = 96/374 (25%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM---TGG-------NNKMIER 74 FDD L+ A +I +V + L+ PLL ++M T G I Sbjct: 10 FDDVLLVP-AHSQILPRDVSLATRLTRNITLNLPLLSAAMDTVTEGRLAIAMAQEGGIGI 68 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDH-------NAIKSFELRQYAP---------HTV 118 I++NL+ A+ +VA + + D E+ + Sbjct: 69 IHKNLSPKAQAAEVAKVKRFESGILKDPITVSPLMTVRDVIEITRQYKISGLPVIDKSGK 128 Query: 119 LISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL----HLNPLQEIIQPNG--------NT 166 ++ + + ++ + + +A+ + + + +E+I+ + + Sbjct: 129 VVGIVTNRDMRFETNLDQPVKAIMTPRKRLVTVKEGASVEDAKELIRRHRLERVLVIDDE 188 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGL-----------SSMDIELGLKSGIRYFDIAG 215 + + + + PL K+ L + +EL ++G+ + Sbjct: 189 WHMRGLITVKDILKSTEHPLANKDSSGRLRAGAAVGVGAGTEERVELLAEAGVDVIVVDT 248 Query: 216 RGG-------------TSWSRIE---------SHRDLESDIGI----------------V 237 G ++ +IE D+G + Sbjct: 249 AHGHSQGVLDRVQWVKKNFPQIEVIGGNIATADAARALVDMGADGVKVGIGPGSICTTRI 308 Query: 238 FQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 G+P +++ IA GG+R DI K+I GA L Sbjct: 309 VAGVGVPQITAIQNVSDSLKGTGVPMIADGGIRYSGDIAKAIAAGADTV-----MLGGLF 363 Query: 296 DSSDAVVAAIESLR 309 ++ +E + Sbjct: 364 AGTEEAPGEVELFQ 377 >gi|119943098|ref|NP_000101.2| dihydropyrimidine dehydrogenase [NADP+] isoform 1 [Homo sapiens] gi|160332325|sp|Q12882|DPYD_HUMAN RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase; Flags: Precursor gi|693912|gb|AAB51366.1| dihydropyrimidine dehydrogenase [Homo sapiens] gi|6729338|dbj|BAA89789.1| dihydropyrimidine dehydrogenase [Homo sapiens] gi|119593409|gb|EAW73003.1| dihydropyrimidine dehydrogenase, isoform CRA_b [Homo sapiens] Length = 1025 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 110/361 (30%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 A+ +P K + I K GG + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSDGT 749 Query: 240 DW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 W G+ T + ++ +A+GG+ + L+ + G Sbjct: 750 PWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSG 809 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V IE ++L K ++EL + A + H Sbjct: 810 ASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSH 859 Query: 337 Q 337 Q Sbjct: 860 Q 860 >gi|558305|gb|AAA57474.1| dihydropyrimidine dehydrogenase [Homo sapiens] Length = 1025 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 110/361 (30%), Gaps = 92/361 (25%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P ++S T G + + + + I Sbjct: 528 IDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + A ++ GAD L L+L+ + + P N + Sbjct: 648 NDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 A+ +P K + I K GG + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSDGT 749 Query: 240 DW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 W G+ T + ++ +A+GG+ + L+ + G Sbjct: 750 PWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSG 809 Query: 281 ASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRH 336 AS+ + A+ + D V IE ++L K ++EL + A + H Sbjct: 810 ASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATVSH 859 Query: 337 Q 337 Q Sbjct: 860 Q 860 >gi|294789269|ref|ZP_06754507.1| glutamate synthase [NADPH] large chain [Simonsiella muelleri ATCC 29453] gi|294482694|gb|EFG30383.1| glutamate synthase [NADPH] large chain [Simonsiella muelleri ATCC 29453] Length = 1328 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + G+ Sbjct: 838 ISVKLVSLPGVGTIATGVAKAYADLITISGYDGGTGASPLTSVKYAGSP-----WELGLA 892 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + ++ + GGL+ G+D++K+ ILGA G P + Sbjct: 893 EAQQALVENNLRHKVRLQVDGGLKTGLDVVKAAILGAESFGFGTGPMVSLGCRYLRICHL 952 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K +++ + + + ++ M LG +++ +L T L+ Sbjct: 953 NNCATGIATQDDTLRDKHFHGTAEKAMNYFKFIAQDVREIMASLGVEKLTDLIGRTDLLE 1012 >gi|229585060|ref|YP_002843562.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus M.16.27] gi|238619962|ref|YP_002914788.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus M.16.4] gi|228020110|gb|ACP55517.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus M.16.27] gi|238381032|gb|ACR42120.1| dihydroorotate dehydrogenase family protein [Sulfolobus islandicus M.16.4] Length = 290 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 17/208 (8%) Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 + + LI ++G +N + + V V+ + + +N + PN Sbjct: 79 INEMNVSCPLIVSVGGASIN------EIKEVVKVIESKAKIIEIN----VSSPNRKGYGE 128 Query: 170 DLSSKIALLSSAMD----VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 LS+ I + + +P+ +K L+ G F + IE Sbjct: 129 SLSTLIGDIVENVKSVTRLPVFVKLGPWDNVVELAGRALEKGADGFTLINTIRGLIVDIE 188 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 + + + + P++L + R E I GG+ + D++ + +GA L Sbjct: 189 TFKPILYYGTGGVSGRCLY-PVALRIIRDVYEEYGVDIIGVGGVYDWTDVIGMLAVGAKL 247 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLRKE 311 GL + ++ + + ++S E Sbjct: 248 VGLGTVLIEKGFSIIEEIRKGLQSYLFE 275 >gi|322391769|ref|ZP_08065234.1| dihydroorotate dehydrogenase A [Streptococcus peroris ATCC 700780] gi|321145249|gb|EFX40645.1| dihydroorotate dehydrogenase A [Streptococcus peroris ATCC 700780] Length = 311 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + + +++ + G Sbjct: 138 PQIAYDFETTDKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNQYPLKFVNCVNSVG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVEIGTTLHK------EGVAA-FERITNELKEIMAEKGYESLEDFR 304 >gi|218895585|ref|YP_002443996.1| putative glutamate synthase, large subunit [Bacillus cereus G9842] gi|218543342|gb|ACK95736.1| putative glutamate synthase, large subunit [Bacillus cereus G9842] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 LPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|152977631|ref|YP_001377148.1| guanosine 5'-monophosphate oxidoreductase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026383|gb|ABS24153.1| guanosine monophosphate reductase [Bacillus cytotoxicus NVH 391-98] Length = 327 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D S+ K P++ M I+ +A Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSITLGKHKFKLPVV-------PANMQTIIDEKIA----- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + +F +R LI+++ ++ A L Sbjct: 55 TYLAENNYFYIMHRFQPETRMAF-VRDMQSRG-LIASISVGVKEEEYEF-IKQLAAEQLS 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + I + + ++ G + + Sbjct: 112 PEYITIDI--------AHGHSNA--VIQMIQHIKKYLPESFVI--AGNVGTPEAVRELEN 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PVIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R DI KSI GA++ + S F + + + ++ Sbjct: 209 GIRTHGDIAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|228919391|ref|ZP_04082759.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840264|gb|EEM85537.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1478 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 LPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|197100733|ref|NP_001126169.1| dihydropyrimidine dehydrogenase [NADP+] [Pongo abelii] gi|75041534|sp|Q5R895|DPYD_PONAB RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase gi|55730588|emb|CAH92015.1| hypothetical protein [Pongo abelii] Length = 1025 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 111/363 (30%), Gaps = 92/363 (25%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINRNLAIAAE 84 + D VD SVE G K P ++S T G + + + + I Sbjct: 526 TAIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585 Query: 85 -KTKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQ 127 ++ M Q + ++ EL+ P ++I+++ Sbjct: 586 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645 Query: 128 LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIAL 177 D+ + A ++ GAD L L+L+ + + P N Sbjct: 646 NKNDWT-ELAKKS-EDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW------ 697 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIV 237 + A+ +P K + I K GG + + + Sbjct: 698 VRQAVQIPFFAKLTPNVTDIVSIARAAK----------EGGANGVTATNTVSGLMGLKSD 747 Query: 238 FQDW------------GIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSII 278 W G+ T + ++ +A+GG+ + L+ + Sbjct: 748 GTPWPAVGIAKRTTYGGVSGTAIRPIALRAVTSTARALPGFPILATGGIDSAESGLQFLH 807 Query: 279 LGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALI 334 GAS+ + A+ + D V IE ++L K ++EL + A + Sbjct: 808 SGASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELQDWDGQSPATV 857 Query: 335 RHQ 337 HQ Sbjct: 858 SHQ 860 >gi|115292419|ref|NP_001041678.1| glutamate synthase [Bombyx mori] gi|113734246|dbj|BAF30425.1| glutamate synthase [Bombyx mori] Length = 2046 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L + + +K V + K + I+G GGT SW+ I Sbjct: 1010 DLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI 1069 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 +S + + G+ + + + A G +R G D++ + +LGA Sbjct: 1070 KS--------AGLPWELGVAETHQVLVLNDLRSRVVVQADGQIRTGFDVMVAALLGADEF 1121 Query: 285 GLASPFLKPA----------------------------MDSSDAVVAAIESLRKEFIVSM 316 G ++ L + VV + L +E M Sbjct: 1122 GFSTAPLIALGCTMMRKCHLNTCPVGIATQDPVLRKKFAGKPEHVVNYLFMLAEEIRQHM 1181 Query: 317 FLLGTKRVQELYLNTALIR 335 +G +R Q+L T L++ Sbjct: 1182 AEVGVRRFQDLIGRTDLLK 1200 >gi|313894382|ref|ZP_07827947.1| glutamate synthase [NADPH], large subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313441206|gb|EFR59633.1| glutamate synthase [NADPH], large subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 1527 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 991 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1050 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1051 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1105 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1106 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1165 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1166 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1206 >gi|296454251|ref|YP_003661394.1| IMP dehydrogenase family protein [Bifidobacterium longum subsp. longum JDM301] gi|296183683|gb|ADH00565.1| IMP dehydrogenase family protein [Bifidobacterium longum subsp. longum JDM301] Length = 442 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S +++ Sbjct: 247 NLKKFIYDLDVPVI---VGGASNYTAALHLMRTGAAGVLV-GFGGGAVSATRQTIGVQAP 302 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K++ LGA L Sbjct: 303 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLG 354 Query: 288 SPFLKP 293 +P + Sbjct: 355 APLARA 360 >gi|292558253|gb|ADE31254.1| GMP reductase [Streptococcus suis GZ1] Length = 375 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 75/265 (28%), Gaps = 40/265 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ ++A K Sbjct: 58 YEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV-------PANMQTIIDEDVAEMLAK 110 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + Y+F A + Sbjct: 111 DG-----YFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEYEFVTSLKADAPEFIT 165 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + I + + ++ G + + Sbjct: 166 IDIAHGH---------------AESVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 208 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 209 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 257 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KSI GAS+ + S F Sbjct: 258 GIRTHGDIAKSIRFGASMVMIGSLF 282 >gi|282849743|ref|ZP_06259127.1| class II glutamine amidotransferase [Veillonella parvula ATCC 17745] gi|282580680|gb|EFB86079.1| class II glutamine amidotransferase [Veillonella parvula ATCC 17745] Length = 1527 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 991 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1050 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1051 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1105 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1106 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1165 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1166 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1206 >gi|110597879|ref|ZP_01386161.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM 13031] gi|110340456|gb|EAT58942.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM 13031] Length = 497 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 63/241 (26%), Gaps = 80/241 (33%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + ++ L +A V ++ + G S + L + IAG + + E+ Sbjct: 235 NTLDRVKALVNA-GVDVVAVDTAHGHSKAVLDTVRLIKNAYADLQVIAG----NVATPEA 289 Query: 227 HRDLESDIGIVF---------------QDWGIPTPLSLEMA--RPYCNEAQFIASGGLRN 269 RDL G+P ++ IA GG++ Sbjct: 290 VRDLIEAGADCVKVGIGPGSICTTRIVAGVGMPQLTAIINCAEEAAKTNTPIIADGGVKY 349 Query: 270 GVDILKSIILGASLG----------------------------GLA-------------S 288 DI K++ GA G+ Sbjct: 350 SGDIAKALAAGADSVMIGSIFAGTDESPGETILYEGRKFKTYRGMGSLGAMSEPEGSSDR 409 Query: 289 PFLKPAMDSSDAVVAAIE--------------SLRKEFIVSMFLLGTKRVQELYLNTALI 334 F + +S V IE L +M G + + EL T + Sbjct: 410 YFQDASKESKKYVPEGIEGRIPSKGQLDEVVYQLIGGLKSAMGYCGVRSIDELKTTTKFV 469 Query: 335 R 335 R Sbjct: 470 R 470 >gi|109900049|ref|YP_663304.1| glutamate synthase subunit alpha [Pseudoalteromonas atlantica T6c] gi|109702330|gb|ABG42250.1| glutamate synthase (NADPH) large subunit [Pseudoalteromonas atlantica T6c] Length = 1488 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+ I+G GGT S + S + S + + Sbjct: 996 QISVKLVSEPGVGTIATGVAKAYADLITISGYDGGTGASPLTSVKYAGSPFELGLAE--- 1052 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS----- 297 T +L ++ + GGL+ G+D++K ILGA G P + Sbjct: 1053 -TQQALVE-NGLRHKVRVQTDGGLKTGLDVIKGAILGAESFGFGTGPMVALGCKYLRICH 1110 Query: 298 -----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V+ + + +E M +G ++ +L T L+ Sbjct: 1111 LNNCATGVATQDEKLRENYFIGLPEMVMNYFKFIAEEVREIMASIGVTKLDDLIGRTELL 1170 Query: 335 R 335 Sbjct: 1171 E 1171 >gi|303231323|ref|ZP_07318058.1| glutamate synthase central domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514003|gb|EFL56010.1| glutamate synthase central domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 1422 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 886 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 945 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 946 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1000 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1001 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFNG 1060 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1061 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1101 >gi|294794410|ref|ZP_06759546.1| glutamate synthase, large subunit [Veillonella sp. 3_1_44] gi|294454740|gb|EFG23113.1| glutamate synthase, large subunit [Veillonella sp. 3_1_44] Length = 1529 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 994 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1053 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1054 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1108 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1109 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1168 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1169 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1209 >gi|269798693|ref|YP_003312593.1| ferredoxin-dependent glutamate synthase [Veillonella parvula DSM 2008] gi|269095322|gb|ACZ25313.1| ferredoxin-dependent glutamate synthase [Veillonella parvula DSM 2008] Length = 1526 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 991 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1050 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1051 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1105 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1106 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1165 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1166 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1206 >gi|42523699|ref|NP_969079.1| glutamate synthase [Bdellovibrio bacteriovorus HD100] gi|39575906|emb|CAE80072.1| glutamate synthase [Bdellovibrio bacteriovorus HD100] Length = 514 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 28/161 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLK----EVGCGLSSMDIE 201 ++ +++I P G+ F+D +A ++ ++ P+ +K + + Sbjct: 279 IRNVPMGKDVISPPGHKAFSDSRGMLAFITKLRELSGGKPIGIKLCLGHRNEFEELVSLM 338 Query: 202 LGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW-GIPTPLSLEMA------R 253 K + + G GGT + +E F ++ G+P +L + Sbjct: 339 SVEKIYPDFIVVDGAEGGTGAAPLE------------FTNYIGMPGMDALVIVVDTLKKA 386 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ + IA+G + DI+K + LGA A L Sbjct: 387 GLKDKIKVIATGKITTAFDIIKLLCLGADATYAARSMLLAL 427 >gi|109899425|ref|YP_662680.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas atlantica T6c] gi|109701706|gb|ABG41626.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas atlantica T6c] Length = 489 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 63/224 (28%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + S DV L+ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRSDFPDVQLIAGNVATG---AGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVEALKDTDVPVIADGGIRFSGDIAKAIAAGASSV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEEAPGEVELYQGRYYKSYRGMGSLGAMDQNNGSSDRYFQDSNSAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G+ + ++ ++ Sbjct: 420 EGRVAYKGPISTIIHQQMGGLRSAMGLTGSATIDDMRTKAMFVK 463 >gi|114327811|ref|YP_744968.1| inosine-5'-monophosphate dehydrogenase [Granulibacter bethesdensis CGDNIH1] gi|114315985|gb|ABI62045.1| inosine-5'-monophosphate dehydrogenase [Granulibacter bethesdensis CGDNIH1] Length = 506 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 60/222 (27%), Gaps = 71/222 (31%) Query: 170 DLSSKIALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + + +A + + DV ++ V + + + +G I G+ + Sbjct: 274 GVLAAVARIKKVSSDVQVIAGNVA---TPEGAQALIDAGADAVKIGIGPGSICTT----- 325 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLG-- 284 V G+P ++ C IA GG+R D++K+I GA Sbjct: 326 -------RVVAGVGVPQFTAVMETAAVCRAAGVPAIADGGIRTSGDVVKAIGAGADCVMV 378 Query: 285 --------------------------GLA-----------SPF-------LKPAMDSSDA 300 G+ F LK + + Sbjct: 379 GSMLAGTDEAPGEVFLYQGRSYKSYRGMGSLGAMARGSADRYFQQDIKDQLKLVPEGIEG 438 Query: 301 -------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V A + + M G+ + +L N R Sbjct: 439 RVGYKGPVAAVLHQMTGGLRAGMGYTGSASITDLQRNARFRR 480 >gi|108563263|ref|YP_627579.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori HPAG1] gi|123373740|sp|Q1CT17|GUAC_HELPH RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|107837036|gb|ABF84905.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori HPAG1] Length = 325 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 86/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN +A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINEPIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + +LI L L D+ Sbjct: 59 NGYFYIMHRFNGSTRIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ---------------RIKTRLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|50086330|ref|YP_047840.1| glutamate synthase subunit alpha [Acinetobacter sp. ADP1] gi|49532306|emb|CAG70018.1| glutamate synthase large chain precursor [Acinetobacter sp. ADP1] Length = 1493 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPEMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|11465531|ref|NP_045078.1| glutamate synthase [Cyanidium caldarium] gi|14423724|sp|O19906|GLTB_CYACA RecName: Full=Ferredoxin-dependent glutamate synthase; AltName: Full=Fd-GOGAT gi|2465754|gb|AAB82683.1| unknown [Cyanidium caldarium] Length = 1549 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 60/183 (32%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + + +K V K+G I+G GGT S + S V + Sbjct: 1060 ECKVSVKLVSEIGVGTIAVGVAKAGAEIIQISGHDGGTGASPLSSI-----KHAGVPWEL 1114 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG------------LAS- 288 G+ L + + GGLR G D++ + +LGA G +A Sbjct: 1115 GLHEVHCLLVENNLREKVILRVDGGLRTGQDVVMAALLGADEYGFGTIAMIAGGCIMARV 1174 Query: 289 ------PF--------LKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 P L+ + VV L +E V + LG + + ++ L Sbjct: 1175 CHTNSCPVGVATQKEELRMRYPGVPENVVNYFIFLAEEIRVILSKLGFETLSQIIGRKDL 1234 Query: 334 IRH 336 I H Sbjct: 1235 INH 1237 >gi|262038888|ref|ZP_06012233.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii F0264] gi|261747091|gb|EEY34585.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii F0264] Length = 489 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 24/176 (13%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + ++ A + ++ + + + KI + A L+ Sbjct: 224 AVGIGNDTLKRVEALVEAGVDIITVDSA--------HGHSKGVIKKIKEIRKAFPDLDLI 275 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G ++ +K+G+ + G+ + V G+P + Sbjct: 276 G--GNIVTKEAALDLIKAGVNAVKVGVGPGSICTT------------RVVSGVGVPQITA 321 Query: 249 LEMARPYCNEAQF--IASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 + C + IA GG++ DI+K+I GA L + ++ Sbjct: 322 ILEIAEVCEKKSIGLIADGGIKLSGDIVKAIAAGADCVMLGGLLAGTNEAPGEEII 377 >gi|161170305|gb|ABX59275.1| glutamate synthase domain 2 [uncultured marine bacterium EB000_55B11] gi|297183833|gb|ADI19956.1| hypothetical protein [uncultured marine bacterium EB000_55B11] Length = 1508 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1021 KAKVTVKLVASSGVGTIAAGVAKAMADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1076 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL----------- 291 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1077 LSEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1136 Query: 292 -----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 K ++D VV I +E + LG + + E Sbjct: 1137 QSNTCPVGVCVQDEELRKKFTGTADKVVNLITFYAQEVREVLASLGLRSLDE 1188 >gi|293394888|ref|ZP_06639178.1| inosine-5'-monophosphate dehydrogenase [Serratia odorifera DSM 4582] gi|291422639|gb|EFE95878.1| inosine-5'-monophosphate dehydrogenase [Serratia odorifera DSM 4582] Length = 532 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 61/221 (27%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I + ++ G ++ + +++G+ + G+ + Sbjct: 301 GVLQRIRETRAKYPDLQIVG--GNVATAAGAKALVEAGVSAVKVGIGPGSICTT------ 352 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T +S + IA GG+R DI K+I GAS + Sbjct: 353 ------RIVTGVGVPQITAISDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-MV 405 Query: 288 SPFL----------------------------------------------KPAMDSSDAV 301 L K + + Sbjct: 406 GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR 465 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++++ + M L G + EL +R Sbjct: 466 VAYKGMLKAIVHQQMGGLRSCMGLTGCATIDELRTKAEFVR 506 >gi|147677064|ref|YP_001211279.1| glutamate synthase domain-containing 2 [Pelotomaculum thermopropionicum SI] gi|146273161|dbj|BAF58910.1| glutamate synthase domain 2 [Pelotomaculum thermopropionicum SI] Length = 525 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 95/315 (30%), Gaps = 85/315 (26%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQ------RVMFSDHNAIKS 107 KL+ P+++++M G+ + +LA A V + +G + + S Sbjct: 114 KLNLPIVVAAM--GSTNVAADNWEHLAAGAAICGVGIVIGENVCAMDPNAEIKNGRVVHS 171 Query: 108 FELRQYAPHTVLISN---LGAVQLNYDFGVQKAHQ-AVHVLGADGLFLH----------- 152 L + N AVQ N + + + A+ LG D + + Sbjct: 172 PNLARRIKDFQRWYNGKGFIAVQANVEDTMLGVQEYALEKLGVDAVEIKWGQGAKDIGGE 231 Query: 153 --LNPLQEIIQ-----------PN----------------------GNTNFADLSSKIAL 177 LN L+ +Q P G N ++++ Sbjct: 232 VKLNTLERALQLKSRGYIVLPDPEDPKVQEAYRMGAFKEFERHSRVGMVNQESFNARVEE 291 Query: 178 LSSAMDVPLLLKEVGCGLSSMDIELGL----KSGIRYFDIAGRGGTSWSRIESHRDLESD 233 L A ++LK D+ + + I + G GG Sbjct: 292 LRKAGAKYVMLK--TGAYRPADLARAVKFASDARIDLLTVDGAGG----------GTGMS 339 Query: 234 IGIVFQDWGIPTP--LSLEM------ARPYCNEAQFIASGGLRNGVDILKSIILGA---S 282 + +WG+PT +L + A +GG + K + +GA Sbjct: 340 PWRMMNEWGVPTVYIQALLVRYLDRLAAKGAFVPPVAIAGGFTLEDHLFKGLAMGAPHIK 399 Query: 283 LGGLASPFLKPAMDS 297 G+A L AM Sbjct: 400 AIGMARSPLTAAMVG 414 >gi|289620327|emb|CBI53185.1| unnamed protein product [Sordaria macrospora] Length = 2116 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1042 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSETGVGIVASGVAKAK 1101 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1102 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1156 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1157 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFTGTP 1216 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1217 EHVINFFYYVANELRAIMARLGFRTINEM 1245 >gi|239815739|ref|YP_002944649.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus S110] gi|239802316|gb|ACS19383.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus S110] Length = 489 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 40/135 (29%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI------------------- 236 + +E +K+G+ + G S IE R ++ + Sbjct: 228 TEERVEALVKAGVDAIVVDTAHGHSAGVIERVRWVKKNYPQVDVIGGNIATGDAARALAD 287 Query: 237 -------------------VFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILK 275 + G+P ++++ IA GG+R DI K Sbjct: 288 AGADAVKVGIGPGSICTTRIVAGVGVPQIMAVDSVATALQGTGIPLIADGGIRYSGDIAK 347 Query: 276 SIILGASLGGLASPF 290 +I GAS + F Sbjct: 348 AIAAGASTVMMGGMF 362 >gi|167855482|ref|ZP_02478246.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parasuis 29755] gi|219870554|ref|YP_002474929.1| inosine 5'-monophosphate dehydrogenase [Haemophilus parasuis SH0165] gi|167853411|gb|EDS24661.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parasuis 29755] gi|219690758|gb|ACL31981.1| inositol-5-monophosphate dehydrogenase [Haemophilus parasuis SH0165] Length = 487 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 56/221 (25%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++P++ V ++ +G I G+ + Sbjct: 256 GVLQRVRETRAKYPNLPIVAGNVA---TAEGAIALADAGASAVKIGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAIADAAEALKDRGIPVIADGGIRYSGDIAKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDA- 300 S F K + + Sbjct: 361 GSMFAGTEEAPGEIELYQGRAFKAYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR 420 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + I M L G + EL +R Sbjct: 421 IPYKGLLKEIIHQQMGGLRSCMGLTGCATIDELRTKAQFVR 461 >gi|146318469|ref|YP_001198181.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus suis 05ZYH33] gi|145689275|gb|ABP89781.1| GMP reductase [Streptococcus suis 05ZYH33] Length = 375 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 93/347 (26%), Gaps = 78/347 (22%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ ++A K Sbjct: 58 YEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV-------PANMQTIIDEDVAEMLAK 110 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + Y+F A + Sbjct: 111 DG-----YFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEYEFVTSLKADAPEFIT 165 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + I + + ++ G + + Sbjct: 166 IDIAHGH---------------AESVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 208 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 209 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 257 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R DI KSI GAS+ G AS + K A + Sbjct: 258 GIRTHGDIAKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEKFKEYYGSASEYQKGAYKN 317 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + + + ++ S+ G + + L +I Sbjct: 318 VEGKKILLPAKGHLEDTLVEMEQDLQSSISYAGGRDITSLKHVDYVI 364 >gi|114769808|ref|ZP_01447418.1| glutamate synthase, large subunit [alpha proteobacterium HTCC2255] gi|114549513|gb|EAU52395.1| glutamate synthase, large subunit [alpha proteobacterium HTCC2255] Length = 1508 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1021 KAKVTVKLVASSGVGTIAAGVAKAMADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1076 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL----------- 291 + + + GGLR G DI+ + +LGA G+ + L Sbjct: 1077 LSEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1136 Query: 292 -----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 K ++D VV I +E + LG + + E Sbjct: 1137 QSNTCPVGVCVQDEELRKKFTGTADKVVNLITFYAQEVREVLASLGLRSLDE 1188 >gi|332532703|ref|ZP_08408579.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas haloplanktis ANT/505] gi|332037919|gb|EGI74368.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas haloplanktis ANT/505] Length = 489 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 55/201 (27%), Gaps = 70/201 (34%) Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP--TPLSL 249 G ++ +G + G+ + + G+P T +S Sbjct: 276 GNIATAEGAIALADAGADAVKVGIGPGSICTT------------RIVTGCGVPQITAISD 323 Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------------ 291 + + IA GG+R DI+K+++ GAS + L Sbjct: 324 AVEGLKGRDIPVIADGGIRFSGDIVKALVAGASCV-MVGSLLAGTEEAPGEVELYQGRYY 382 Query: 292 ------------------------------KPAMDSSDAVVAA---IESLRKE----FIV 314 K + + VA I ++ + Sbjct: 383 KSYRGMGSLGAMDQKEGSSDRYFQKSNEADKLVPEGIEGRVAYKGPIATIIHQQVGGLRS 442 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M L G ++EL +R Sbjct: 443 AMGLTGCATIEELNTKPQFVR 463 >gi|259501327|ref|ZP_05744229.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335] gi|302190949|ref|ZP_07267203.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners AB-1] gi|309806011|ref|ZP_07700037.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 03V1-b] gi|312873761|ref|ZP_07733806.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2052A-d] gi|259167297|gb|EEW51792.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335] gi|308167614|gb|EFO69767.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LactinV 03V1-b] gi|311090759|gb|EFQ49158.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF 2052A-d] Length = 306 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 18/248 (7%) Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N IA K V +VG + K ++ P LI+++G Q++ + Sbjct: 56 NPQPQIAVMKNGVLNSVGLTNPGVDKVISDKIAPFKEQYPQLPLIASVGGSQISDYITIA 115 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 K +L A + + + G T+ + + + +++P+ +K Sbjct: 116 KKLSDSGLLNALEINVSCPNVAAGGMHLG-TDPVVVEKLTSEIKKVVNIPVYIKLTPNVT 174 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIE-----SHRDLESDIGIVFQDWGIPT--PLS 248 + ++I + G G G S + ++ +G F W P++ Sbjct: 175 NIVEIAQAAERG-------GADGLSMINTLLGLGIDIKTHKATLGNGFGGWSGSAIKPVA 227 Query: 249 LEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + M + I GG+ DI++ ++ GAS + + K + +VA +E Sbjct: 228 VRMVAQVHQAVKLPIIGMGGIETAEDIVEFMLAGASAVAVGTAHFKDGLA-IPHLVADLE 286 Query: 307 SLRKEFIV 314 +L E V Sbjct: 287 TLLNELKV 294 >gi|146320662|ref|YP_001200373.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus suis 98HAH33] gi|145691468|gb|ABP91973.1| GMP reductase [Streptococcus suis 98HAH33] Length = 375 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 75/265 (28%), Gaps = 40/265 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ ++A K Sbjct: 58 YEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV-------PANMQTIIDEDVAEMLAK 110 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + Y+F A + Sbjct: 111 DG-----YFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEYEFVTSLKADAPEFIT 165 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + I + + ++ G + + Sbjct: 166 IDIAHGH---------------AESVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 208 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 209 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 257 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KSI GAS+ + S F Sbjct: 258 GIRTHGDIAKSIRFGASMVMIGSLF 282 >gi|319779300|ref|YP_004130213.1| Ferredoxin-dependent glutamate synthase [Taylorella equigenitalis MCE9] gi|317109324|gb|ADU92070.1| Ferredoxin-dependent glutamate synthase [Taylorella equigenitalis MCE9] Length = 564 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 91/302 (30%), Gaps = 43/302 (14%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFP-----LLISSMTGGNNKMIERINRNLAIA 82 + I+ ++ D D G + P IS+M+ G + +L Sbjct: 124 QYEWINHSMHPTKIDNFDFRTTVGGPQCKQPYSISIFNISAMSFGALSKNAIL--SLNRG 181 Query: 83 AEKTKVA------------MAVGSQ-----RVMFSDHNAIKSFELRQYAPHTVLISNLGA 125 A++ A M G F N+ +F ++A N+ Sbjct: 182 AKQGGFAHDTGEGGISKYHMQGGDLIWNIGSGYFGCRNSDGTFSDEEFAKKATQ-PNVKM 240 Query: 126 VQLNYDFGVQ--------KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA--DLSSKI 175 ++L G + A + A G+ + + P +T ++ Sbjct: 241 IELKVSQGAKPGHGGILPGAKVTPEIAEARGVPVGEDCNSPAFHPEFDTPIEMMHFIQRL 300 Query: 176 ALLS--SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLES 232 LS + + + S L + + G GGT + IE Sbjct: 301 RDLSGGKPVGFKICIGHAWEFFSIAKAFLETGIYPDFIVVDGAEGGTGAAPIE----FAD 356 Query: 233 DIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 +G ++ G+ + + + A+G + DI +++ LGA F+ Sbjct: 357 HVGTPLRE-GLRLVHNTLVGIGLRKHIKIGAAGKIITAFDIARTLSLGADWCNAGRGFMF 415 Query: 293 PA 294 Sbjct: 416 AV 417 >gi|157693547|ref|YP_001488009.1| 2-nitropropane dioxygenase [Bacillus pumilus SAFR-032] gi|157682305|gb|ABV63449.1| 2-nitropropane dioxygenase [Bacillus pumilus SAFR-032] Length = 343 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 62/269 (23%) Query: 62 SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLIS 121 + M GG + L A + +GS + + LRQ ++ Sbjct: 17 APMAGGA------VTPQLVAAVSQCG---GLGSLASGYVQPDH-----LRQQIKQVKQLT 62 Query: 122 ------NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 N+ + + + L A L +E+ + D KI Sbjct: 63 TRQFHVNVFVPESISEVKKEDVAFWEKKLPARPAADSLPSEKEL--------WHDFEQKI 114 Query: 176 ALLSSAMDVPLL--------------LKE-----VGCGLSSMDIELGLKSGIRYFDIAG- 215 +L DVP++ LK+ +G + + L + G+ + G Sbjct: 115 NILLEE-DVPIVSFTFSCPNEQTIHRLKQKGIFLIGTATTKEEALLLEEKGMDAIVLQGS 173 Query: 216 -RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDIL 274 GG + + + D + +F D +P C IA+GG+ + + Sbjct: 174 EAGGHRGTFLPAKGDALVGLFSLFSD-----------VKPIC-HVPLIAAGGITDRAGVE 221 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVA 303 ++ LGA + + FL ++ V Sbjct: 222 VALALGADAAQVGTRFLASQESAAADVYK 250 >gi|77359601|ref|YP_339176.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas haloplanktis TAC125] gi|76874512|emb|CAI85733.1| IMP dehydrogeanse [Pseudoalteromonas haloplanktis TAC125] Length = 489 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 63/224 (28%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++A D+ ++ V ++ +G + G+ + Sbjct: 256 GVIDRVAKTRKEYPDLQIIAGNVA---TAEGAVALADAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI+K+++ GAS + Sbjct: 308 -------RIVTGCGVPQITAISDAVDGLKGRDIPVIADGGIRFSGDIVKALVAGASCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSLLAGTEEAPGEVELYQGRYYKSYRGMGSLGAMDQKEGSSDRYFQKSNEADKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G ++EL +R Sbjct: 420 EGRVAYKGPIATIIHQQVGGLRSAMGLTGCATIEELNTKPQFVR 463 >gi|325123716|gb|ADY83239.1| glutamate synthase large chain precursor [Acinetobacter calcoaceticus PHEA-2] Length = 1491 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1005 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1059 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1060 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1119 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + ++ + +E + LG +++L Sbjct: 1120 NNCATGVATQQDHLRQEHYIGEPEMLINFFHFIAEETREWLAALGVSSLKDL 1171 >gi|299768553|ref|YP_003730579.1| glutamate synthase subunit alpha [Acinetobacter sp. DR1] gi|298698641|gb|ADI89206.1| glutamate synthase subunit alpha [Acinetobacter sp. DR1] Length = 1493 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPEMLINFFHFIAEETREWLAALGVSSLKDL 1173 >gi|290475586|ref|YP_003468474.1| IMP dehydrogenase [Xenorhabdus bovienii SS-2004] gi|289174907|emb|CBJ81708.1| IMP dehydrogeanse [Xenorhabdus bovienii SS-2004] Length = 488 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 61/222 (27%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + D+ ++ V G + ++G+ + G+ + Sbjct: 256 GVLQRIRETRAKYPDLQIIGGNVATG---EGAKALFEAGVNAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T ++ + IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGVGVPQITAIADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-M 359 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 360 VGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEG 419 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++S+ + M L G + EL +R Sbjct: 420 RVAYKGLLKSIVHQQMGGLRSCMGLTGCATIDELRTKAEFVR 461 >gi|326692581|ref|ZP_08229586.1| IMP dehydrogenase/GMP reductase [Leuconostoc argentinum KCTC 3773] Length = 390 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 35/281 (12%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM-TGGNNKMIERINR--NLAI 81 FDD L++ A +I ++V S KL PL+ ++M T + + + L + Sbjct: 26 FDDMKLVYDANAQIQPEDVSVSTVLTPTLKLQLPLISAAMDTVTEARFATELAKLGGLGV 85 Query: 82 AAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 + +A R + + +F L+ GAV + D V++ V Sbjct: 86 VHKNMTIAEQADEIRAVKTATFDQAAFPNAAVDAQGRLL-VAGAVGVTSD-TVKRVEAMV 143 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDI 200 G D + L + + + + K++ + A + ++ G ++ Sbjct: 144 -AAGVDAIVL----------DSAHGHSEGVLRKVSEVREAFPELNIIA---GNIATTAGA 189 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP--YCNE 258 ++G + G+ + V G+P ++ A Sbjct: 190 AALYEAGADVVKVGIGPGSICTT------------RVVAGIGVPQLSAVRDAAEEGARRG 237 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 IA GG + DI+K++ G + L S F A + Sbjct: 238 KSIIADGGAKTAEDIIKALASGGNAVMLGSMFSGTAETPGE 278 >gi|293569385|ref|ZP_06680682.1| guanosine monophosphate reductase [Enterococcus faecium E1071] gi|291587911|gb|EFF19762.1| guanosine monophosphate reductase [Enterococcus faecium E1071] Length = 325 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F + LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEAARIPF--IKKMKKRGLITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDMIQHIKKYLPKTFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|332521079|ref|ZP_08397537.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola 5H-3-7-4] gi|332043172|gb|EGI79369.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola 5H-3-7-4] Length = 496 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 79/250 (31%), Gaps = 41/250 (16%) Query: 60 LISSMTGGNNKMIERI---N--RNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYA 114 LI++ G + K E+I N L I E+ V + + + Sbjct: 169 LITAAEGTSLKDAEKILQENKIEKLLIVKEEKLVGLITFRDITKVTQKPIA----NKDTY 224 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 + + +G V++A V+ G D + + + + + + Sbjct: 225 GRLRVAAAIGVT----GDAVERAEALVNA-GVDAIII----------DTAHGHTKGVVAV 269 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + + S ++ VG ++ + +++G + G+ + Sbjct: 270 LKEVKSKFPKLEVV--VGNIATAEAAKYLVEAGADAVKVGIGPGSICTT----------- 316 Query: 235 GIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 V G P ++ + IA GG+R DI K+I GA + L Sbjct: 317 -RVVAGVGFPQFSAVLEVANAIKGSGVPVIADGGIRYTGDIPKAIAAGADTV-MLGSLLA 374 Query: 293 PAMDSSDAVV 302 +S + Sbjct: 375 GTKESPGETI 384 >gi|331266152|ref|YP_004325782.1| dihydroorotate dehydrogenase [Streptococcus oralis Uo5] gi|326682824|emb|CBZ00441.1| dihydroorotate dehydrogenase [Streptococcus oralis Uo5] Length = 311 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G +R+++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMAEKGYERLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|326381884|ref|ZP_08203577.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL B-59395] gi|326199310|gb|EGD56491.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL B-59395] Length = 488 Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 31/194 (15%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + ++ + +GA + + A V VL D H Sbjct: 206 KDADGRLLVGAAVGAGDEAWSRALALAEVGVDVLVVDSAHGH---------------SRG 250 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + IA L + + + L G + + + +G+ + G+ + Sbjct: 251 VLEMIAKLKAEIGDRVQLIG-GNVATRSGAQALIDAGVDAVKVGVGPGSICTT------- 302 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G P ++ A C + +A GGL+ D+ K++ GAS + Sbjct: 303 -----RVVAGVGAPQITAILEAVAACKAADVPVVADGGLQYSGDVAKALAAGAS-TAMLG 356 Query: 289 PFLKPAMDSSDAVV 302 L +S ++ Sbjct: 357 SLLAGTAESPGELI 370 >gi|241005587|ref|XP_002405016.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] gi|215491683|gb|EEC01324.1| (S)-2-hydroxy-acid oxidase, putative [Ixodes scapularis] Length = 88 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 E+ R + GG+R G D++K++ LGA + P L Sbjct: 7 EIVRAVRGRVEVYLDGGVRRGTDVIKALGLGAKAVFVGRPALWGL 51 >gi|322387553|ref|ZP_08061162.1| dihydroorotate dehydrogenase A [Streptococcus infantis ATCC 700779] gi|321141420|gb|EFX36916.1| dihydroorotate dehydrogenase A [Streptococcus infantis ATCC 700779] Length = 311 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILSEVFEYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D+ Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDV 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + KE M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITKELKEIMTEKGYQSLEDFR 304 >gi|303228649|ref|ZP_07315474.1| class II glutamine amidotransferase [Veillonella atypica ACS-134-V-Col7a] gi|302516629|gb|EFL58546.1| class II glutamine amidotransferase [Veillonella atypica ACS-134-V-Col7a] Length = 1527 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 991 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCVNKDARISVKLTSEAGVGTIAAGVAK 1050 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + Q Sbjct: 1051 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVQLEVD 1105 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1106 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFNG 1165 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1166 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1206 >gi|119713553|gb|ABL97605.1| glutamate synthase large subunit [uncultured marine bacterium EB0_39F01] Length = 1508 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 32/169 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1024 VTVKLVASSGVGTIAAGVAKAMADVILISGHNGGTGASP----ATSIKYAGLPWEMGLSE 1079 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------------- 291 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1080 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSN 1139 Query: 292 --------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 K ++D VV I +E + LG + + E Sbjct: 1140 TCPVGVCVQDEELRKKFTGTADKVVNLITFYAQEVREVLASLGLRSLDE 1188 >gi|47567087|ref|ZP_00237803.1| glutamate synthase [Bacillus cereus G9241] gi|47556143|gb|EAL14478.1| glutamate synthase [Bacillus cereus G9241] Length = 1143 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 839 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVAS 896 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 897 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 952 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 953 SNNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 1012 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 1013 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEANMRHKVEIWADGGIRSVNDALKIM 1067 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 1068 LLGANRIGFG 1077 >gi|325102941|ref|YP_004272595.1| glutamate synthase (NADH) large subunit [Pedobacter saltans DSM 12145] gi|324971789|gb|ADY50773.1| glutamate synthase (NADH) large subunit [Pedobacter saltans DSM 12145] Length = 1510 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 68/226 (30%), Gaps = 45/226 (19%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + + +K V K+ Sbjct: 990 HSTPGVGLISPPPHHDIYSIEDLAQLIFDMKNANRNARINVKLVSKAGVGTIAAGVAKAH 1049 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 IAG GGT S I S + + G+ + + A G Sbjct: 1050 ADVILIAGHDGGTGASPISSI-----KHAGLPWELGLAEAHQTLVKNKLRSRVILQADGQ 1104 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 L+ G DI + +LGA G+A+ L K Sbjct: 1105 LKTGRDIAVAALLGAEEWGVATAALVAGGCIMMRKCHLNTCPVGVATQDPELRKLFSGKP 1164 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQE-------LYLNTALIRHQ 337 + +V + + E M LG + + E L +I + Sbjct: 1165 EHIVNLFKFIAHELREIMAELGFRTINEMVGKAQFLKRKEGIIHWK 1210 >gi|194015727|ref|ZP_03054343.1| 2-nitropropane dioxygenase [Bacillus pumilus ATCC 7061] gi|194013131|gb|EDW22697.1| 2-nitropropane dioxygenase [Bacillus pumilus ATCC 7061] Length = 343 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 94/265 (35%), Gaps = 56/265 (21%) Query: 60 LI-SSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTV 118 +I + M GG + LA A + +GS + + ++ ++RQ T Sbjct: 14 MIQAPMAGGA------VTPQLAAAVSQCG---GLGSLASGYVQPDHLRQ-QIRQVKQLTT 63 Query: 119 LIS--NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 + N+ + + + L A + L +E+ + D KI Sbjct: 64 RLFQVNVFVPEPISEVKKEDVAFWEKRLPARPVADRLPSEEEL--------WNDFEQKIN 115 Query: 177 LLSSAMDVPLL--------------LKE-----VGCGLSSMDIELGLKSGIRYFDIAG-- 215 +L DVP++ LK+ +G + + L + G+ + G Sbjct: 116 ILLDE-DVPVVSFTFACPNEQTIHRLKQKGIFLIGTATTKEEALLLEEKGMDAIVLQGSE 174 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GG + + + D + + D +P C IA+GG+ + + Sbjct: 175 AGGHRGTFLPAKGDALMGLFSLISD-----------VKPLC-HVPLIAAGGITDRAGVEA 222 Query: 276 SIILGASLGGLASPFLKPAMDSSDA 300 ++ LGA + + FL + +S+ A Sbjct: 223 ALALGADAVQIGTRFL-ASQESAAA 246 >gi|33241117|ref|NP_876059.1| ferredoxin-dependent glutamate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238647|gb|AAQ00712.1| Ferredoxin-dependent glutamate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 1524 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 34/184 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT S + S + + Sbjct: 1045 KAKVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSI-----THAGLPWEL 1099 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS------------- 288 G+ + + N A GGL+ G D++ + +LGA G S Sbjct: 1100 GLTEVHRVLLENGLRNRVLLRADGGLKTGWDVVMAALLGAEEYGFGSIAMIAEGCIMARI 1159 Query: 289 --------------PFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 L+ + VV + +E M LLG ++E+ NT + Sbjct: 1160 CHTNKCPVGVATQQEALRKRFSGVPEHVVNFFLFVAEEVRQIMSLLGASTLEEIIGNTEM 1219 Query: 334 IRHQ 337 ++ + Sbjct: 1220 LQSR 1223 >gi|85712714|ref|ZP_01043759.1| inositol-5-monophosphate dehydrogenase [Idiomarina baltica OS145] gi|85693446|gb|EAQ31399.1| inositol-5-monophosphate dehydrogenase [Idiomarina baltica OS145] Length = 489 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 62/224 (27%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ A ++ ++ V ++ + + +G+ + G+ + Sbjct: 256 GVLKRVQETRKAYPNLQIIAGNVA---TAAGAKALVDAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S IA GG+R DI K+++ GA + Sbjct: 308 -------RIVTGCGVPQITAISDAADALKGTGVPVIADGGIRFSGDIAKALVAGAHCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEESPGEVELYQGRYYKSYRGMGSLGAMNQRNGSSDRYFQNSNEAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + +A I ++ + +M L G ++E+ ++ Sbjct: 420 EGRIAYKGPISAIIHQQMGGVRSAMGLTGCANLEEMRTKPQFVK 463 >gi|313837183|gb|EFS74897.1| dihydroorotate dehydrogenase 1B [Propionibacterium acnes HL037PA2] gi|314927797|gb|EFS91628.1| dihydroorotate dehydrogenase 1B [Propionibacterium acnes HL044PA1] gi|314971955|gb|EFT16053.1| dihydroorotate dehydrogenase 1B [Propionibacterium acnes HL037PA3] gi|328907261|gb|EGG27027.1| dihydroorotate dehydrogenase 1B [Propionibacterium sp. P08] Length = 307 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 82/259 (31%), Gaps = 24/259 (9%) Query: 81 IAAEKTKVAM-AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ 139 AE + A+G Q A K L ++ P +I+N+ V + Sbjct: 59 RVAETPGGMLNAIGLQNPGLDAVMAEKLPWLAEHFPDLPIIANVAGYTTGDYVRVCEVIS 118 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 + A + + ++ G TN + SA VP+ +K + Sbjct: 119 TAPNVAALEINISCPNVKRGGMTFG-TNATVAHDLTQAVVSAASVPVYVKLSPNVTDITE 177 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD-WG-------IPTPLSLEM 251 I + D G T + + R + V + G +P + + Sbjct: 178 IARAVT------DAGADGLTLINTLTGMRINVARRAPVLANATGGLSGPAVLPIAVRMID 231 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 A + I GG+ D L+ ++ GAS G+ + A I+ Sbjct: 232 AVTRAVDIPVIGMGGVTTSADALELMMAGASAVGVGT----ANFTDPLACPKIIDG---- 283 Query: 312 FIVSMFLLGTKRVQELYLN 330 + M LG +++L Sbjct: 284 LELLMDDLGIDSLEDLRTQ 302 >gi|293610716|ref|ZP_06693016.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827060|gb|EFF85425.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 1506 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1020 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1074 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1075 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1134 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + ++ + +E + LG +++L Sbjct: 1135 NNCATGVATQQDHLRQEHYIGEPEMLINFFHFIAEETREWLAALGVSSLKDL 1186 >gi|217967139|ref|YP_002352645.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM 6724] gi|217336238|gb|ACK42031.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM 6724] Length = 493 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 67/215 (31%), Gaps = 33/215 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D ++ + L++ GA G + +A ++ A+ + ++ Sbjct: 198 ITIKDIQKMRQYPNAAKDKKGRLLA--GAA---IGVGDEAIRRAKALVEAEVDVIVIDTA 252 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 + + + + L +++ G ++ + + +G + Sbjct: 253 --------HGHHKKVLETVKELKKLFSKEVVI-VAGNVATAEGTKALIDAGADVVKVGIG 303 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDIL 274 G+ + V G+P ++ + IA GG++ DI Sbjct: 304 PGSICTT------------RVVAGIGVPQFSAIWECAKEAQKHNVPIIADGGIKFSGDIT 351 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 K+I GA L + ++ IE + Sbjct: 352 KAIAAGAHAV-----MLGSLLAGTEESPGEIEIYQ 381 >gi|85083706|ref|XP_957167.1| glutamate synthase precursor [Neurospora crassa OR74A] gi|8218225|emb|CAB92626.1| probable glutamate synthase (NADPH) [Neurospora crassa] gi|28918254|gb|EAA27931.1| glutamate synthase precursor [Neurospora crassa OR74A] Length = 2116 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1042 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSETGVGIVASGVAKAK 1101 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1102 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1156 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1157 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFTGTP 1216 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1217 EHVINFFYYVANELRAIMARLGFRTINEM 1245 >gi|228937764|ref|ZP_04100397.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970643|ref|ZP_04131291.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977223|ref|ZP_04137622.1| Glutamate synthase, large subunit [Bacillus thuringiensis Bt407] gi|228782532|gb|EEM30711.1| Glutamate synthase, large subunit [Bacillus thuringiensis Bt407] gi|228789109|gb|EEM37040.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821916|gb|EEM67911.1| Glutamate synthase, large subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938248|gb|AEA14144.1| glutamate synthase [NADPH] large chain [Bacillus thuringiensis serovar chinensis CT-43] Length = 1478 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAIK 106 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 840 LPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPHTRGQQVASG 897 Query: 107 SFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQPN 163 F + ++ +G + G + + + A + ++I P+ Sbjct: 898 RFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISPS 953 Query: 164 GNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-GG 218 N + DL+ I + +A + + +V + I + K+G + +I+G GG Sbjct: 954 NNHDIYSIEDLAQMITEIKTANQLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDGG 1013 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T +RI + + + + + G+ + + ++ + A GG+R+ D LK ++ Sbjct: 1014 TGAARIHALQHVGLPV-----EIGVKAAHNALLEASMRHKVEIWADGGIRSVNDALKIML 1068 Query: 279 LGASLGGLA 287 LGA+ G Sbjct: 1069 LGANRIGFG 1077 >gi|94676669|ref|YP_589074.1| inosine-5'-monophosphate dehydrogenase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219819|gb|ABF13978.1| inosine-5'-monophosphate dehydrogenase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 485 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 37/149 (24%), Gaps = 56/149 (37%) Query: 242 GIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 G+P T ++ + IA GG+R DI K+I GA + L Sbjct: 312 GVPQITAIADVVEALKGTNIPVIADGGIRFSGDIAKAIAAGAHCV-MVGSLLAGTEESPG 370 Query: 292 --------------------------------------KPAMDSSDA-------VVAAIE 306 K + + ++ I Sbjct: 371 DIELYQGRSFKCYRGMGSIGAMSQGASYRYFQNDQVANKLVPEGIEGRVAYKGSLIEIIH 430 Query: 307 SLRKEFIVSMFLLGTKRVQELYLNTALIR 335 M L G ++EL +R Sbjct: 431 QQIGGLRSCMGLTGCATIEELRTKAEFVR 459 >gi|77745493|gb|ABB02645.1| crystallinum glycolate oxidase-like [Solanum tuberosum] Length = 139 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + N+ F R L + +D + LG K+S P++++ Sbjct: 30 AEDQWTLQENRNAFSRILFRPRIL--VDVSNIDTTTSVLGFKISMPIMVAPTA 80 >gi|329116884|ref|ZP_08245601.1| dihydroorotate dehydrogenase 1A [Streptococcus parauberis NCFD 2020] gi|326907289|gb|EGE54203.1| dihydroorotate dehydrogenase 1A [Streptococcus parauberis NCFD 2020] Length = 311 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 18/215 (8%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSA 181 L V L+ D + + GL L+L+ +P +F S + + S Sbjct: 99 LSVVGLSPD-DTDTILKTIQESDYQGLVELNLSCPNVPGKPQIAYDFEMTHSLLTEVFSY 157 Query: 182 MDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIG 235 PL +K E+ + + + + G + IE ++ G Sbjct: 158 FTKPLGVKLPPYFDIVHFDQAAEIFNQFPLAFVNCVNSVG-NGLVIEDESVVIKPKTGFG 216 Query: 236 IVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + D+ PT L+ A + Q + +GG++NG D + I+ GAS+ + + + Sbjct: 217 GIGGDYIKPTALANVHAFYQRLNPSIQIVGTGGVKNGRDAFEHILCGASMVQIGTALHE- 275 Query: 294 AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + + + +E V M G + +++ Sbjct: 276 --EGPE----IFNRITEELRVIMKEKGYQTIEDFR 304 >gi|325911919|ref|ZP_08174322.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D] gi|325476221|gb|EGC79384.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D] Length = 306 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 18/248 (7%) Query: 76 NRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ 135 N IA K V +VG + K ++ P LI+++G Q++ + Sbjct: 56 NPQPQIAVMKNGVLNSVGLTNPGVDKVISDKIAPFKEQYPQLPLIASVGGSQISDYITIS 115 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGL 195 K +L A + + + G T+ + + + +++P+ +K Sbjct: 116 KKLSDSGLLNALEINVSCPNVAAGGMHLG-TDPVVVEKLTSEIKKVVNIPIYIKLTPNVT 174 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIE-----SHRDLESDIGIVFQDWGIPT--PLS 248 + ++I + G G G S + ++ +G F W P++ Sbjct: 175 NIVEIAQAAERG-------GADGLSMINTLLGLGIDIKTHKATLGNGFGGWSGSAIKPVA 227 Query: 249 LEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + M + I GG+ DI++ ++ GAS + + K + +VA +E Sbjct: 228 VRMVAQVHQAVKLPIIGMGGIETAADIVEFMLAGASAVAVGTAHFKDGLA-IPHLVADLE 286 Query: 307 SLRKEFIV 314 +L E V Sbjct: 287 TLLNELKV 294 >gi|302409476|ref|XP_003002572.1| ferredoxin-dependent glutamate synthase [Verticillium albo-atrum VaMs.102] gi|261358605|gb|EEY21033.1| ferredoxin-dependent glutamate synthase [Verticillium albo-atrum VaMs.102] Length = 500 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ SA + +K V + K+ Sbjct: 94 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSAPRSRVSVKLVSEVGVGIVASGVAKAK 153 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 154 ADHVLISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 208 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G DI + +LGA G A+ L K + Sbjct: 209 LRTGRDIAIACLLGAEEWGFATAPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFTGTP 268 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ L E M LG + + E+ Sbjct: 269 EHVINFFYYLANELRAIMARLGFRTINEM 297 >gi|239624920|ref|ZP_04667951.1| dihydroorotate dehydrogenase [Clostridiales bacterium 1_7_47_FAA] gi|239521306|gb|EEQ61172.1| dihydroorotate dehydrogenase [Clostridiales bacterium 1_7_47FAA] Length = 362 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 95/312 (30%), Gaps = 47/312 (15%) Query: 45 DPSVEFLGKKLSFPLL--ISSMTGGNNKMIERINRNLAIAAEKTKVA------------- 89 D S + G + PLL +TG + +MI + L KT Sbjct: 2 DLSTKAAGLTFNTPLLPGSGPLTGTDERMIYLAKQGLGAIVTKTIAPEGAEVGRPCIAGR 61 Query: 90 --MAVGSQRVMFSDHNA-IKSF-ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 M S+ D ++F + A T +I+++G + + + V Sbjct: 62 GNMIFNSESWSEYDSQVWAQTFIPNTRKAVDTPIIASVGYDEEDMKVLIPLLDSMVEGFE 121 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG-L 204 ++ +F ++ + + S D PL +K + Sbjct: 122 YIPRYV-------------GKDFDEVGHIVKTIRSMTDKPLWVKMNANIPDPVGFAGACR 168 Query: 205 KSGIRYFDIAGRGGTSWS-RIESHRDLESDIGIVFQDWGIPT-----PLSLEMARPYCNE 258 +G G + IE R L G G P + M + Sbjct: 169 DNGADGVVAITSLGPNMVIDIEHRRPLIGIPGGYVWTSG-PAIKPLALACVNMIKEAYPG 227 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFL 318 IASGG D+++ ++ GA + + + D +E E ++ Sbjct: 228 LSVIASGGCAKAEDVIEFLLAGADAVQM---LSEAMLKGRDTYSKVLE----ELSKALGR 280 Query: 319 LGTKRVQELYLN 330 G V+++ Sbjct: 281 YGFSSVEDVKAC 292 >gi|188995862|ref|YP_001930114.1| dihydroorotate dehydrogenase 2 [Porphyromonas gingivalis ATCC 33277] gi|188595542|dbj|BAG34517.1| putative dihydroorotate dehydrogenase [Porphyromonas gingivalis ATCC 33277] Length = 326 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 96/292 (32%), Gaps = 31/292 (10%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE-------KTKVAMAVGSQR 96 +D S EF G +L P+ +++ +G + + A A + ++ + Sbjct: 2 IDLSTEFAGLRLKNPI-VAACSGLTRNLKTIKDLEAAGVAAIVLKSLFEEQIEAEMSQMM 60 Query: 97 VMFSDHNAIK---------------SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A F LR+ + D V A Q Sbjct: 61 SPMDYPEAADYINAYVQSNEISKHLDF-LREVKREVAIPVIASINCFRSDSWVDFAKQ-F 118 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS-SMDI 200 GAD L +++ L + + N I+ L A+ +P+++K + + Sbjct: 119 EEAGADALEINVMRLNTDLFFDANKAEQMYVDIISSLIKAIRIPVVVKLSKSFANIPSLV 178 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG-IP-TPLSLEMARPYCNE 258 + +G + + S+ ++ G VF G I T + Sbjct: 179 DKLRAAGAKGVVLFN---RSYQPDIDIDKVQMVAGDVFTSAGEISDTIRHAGIVSALVPG 235 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 +S G+ +G LK ++ GA + + + K ++A IES + Sbjct: 236 ISIASSTGIHDGEAALKCLLAGAHVTQICTVLYKKGPQFVAEMIATIESWMQ 287 >gi|50547297|ref|XP_501118.1| YALI0B19998p [Yarrowia lipolytica] gi|49646984|emb|CAG83371.1| YALI0B19998p [Yarrowia lipolytica] Length = 2119 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 64/226 (28%), Gaps = 45/226 (19%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1028 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIIASGVAKAK 1087 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1088 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVTVQTDGQ 1142 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 +R G D+ + +LGA G A+ L + Sbjct: 1143 IRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRQKFKGTP 1202 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQE-------LYLNTALIRHQ 337 + V+ + E M LG + + E L + L H+ Sbjct: 1203 EHVINFFYYIANELRGIMAQLGFRTIDEMVGHAEMLRVRDDLRNHK 1248 >gi|317012660|gb|ADU83268.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori Lithuania75] Length = 325 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 87/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINESIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + GS R+ F + I S + +LI L L D+ Sbjct: 59 NGYFYIMHRFDGSARIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + + ++ G + Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ---------------HIKTRLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|288555501|ref|YP_003427436.1| guanosine 5'-monophosphate oxidoreductase [Bacillus pseudofirmus OF4] gi|288546661|gb|ADC50544.1| guanosine 5'-monophosphate oxidoreductase [Bacillus pseudofirmus OF4] Length = 327 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 88/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D ++ P++ M I+ +A K Sbjct: 7 YEDIQLIPAKCVVNSRSECDTTITLGKHTFKMPVV-------PANMQTIIDETIATFLAK 59 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQ--AVH 142 + + SF +R ++ S +G YDF +Q A + Sbjct: 60 NG-----YFYIMHRFEPEKRVSF-IRDMKSRELISSISVGVKAEEYDFVLQLAEEQLVPD 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ + + ++ G + + Sbjct: 114 YITIDIAHGHSNAVIEMIQ---------------HIKKHLPDCFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L ++ I Sbjct: 157 LEHAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PVI 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R DI KSI GAS+ + S F + + + ++ Sbjct: 206 ADGGIRTHGDIAKSIRFGASMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|255039214|ref|YP_003089835.1| Glutamate synthase (ferredoxin) [Dyadobacter fermentans DSM 18053] gi|254951970|gb|ACT96670.1| Glutamate synthase (ferredoxin) [Dyadobacter fermentans DSM 18053] Length = 1526 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 63/209 (30%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + +K V K+ Sbjct: 990 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRAARISVKLVSEAGVGTVASGVAKAH 1049 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT S + S R + + + A G Sbjct: 1050 ADHILISGYDGGTGASPLSSIRHAGLPWELGLAETHQT-----LVRNKLRGRVTVQADGQ 1104 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 LR G D+ + +LGA G+A+ L A Sbjct: 1105 LRTGRDLAIAALLGAEEWGVATAALVAAGCIMMRKCHLNTCPVGVATQRKELRALFSGKP 1164 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + +E M LG + V E+ Sbjct: 1165 EHVVNMFTYMAEELREIMAQLGFRTVNEM 1193 >gi|242243755|ref|ZP_04798199.1| glutamate synthase (NADPH) [Staphylococcus epidermidis W23144] gi|242232853|gb|EES35165.1| glutamate synthase (NADPH) [Staphylococcus epidermidis W23144] Length = 525 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 90/278 (32%), Gaps = 45/278 (16%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--------GSQRVMFSD 101 LG L P I + G + + +N AI A +A A G Sbjct: 165 VLGSNLKHPFKIKRLVGQSGMSYGALGKN-AITALSMGLAKAGTWMNTGEGGLSEYHLKG 223 Query: 102 HNAI------KSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVL 144 + I F +R + + + NL F ++ A A V Sbjct: 224 NGDIIYQIGPGLFGVRDHDGNFNRDMFINLAKHNNVRAFEIKLAQGAKTRGGHMEGNKVT 283 Query: 145 GADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ P + I PN N DL + + L S P+ K V + +IE Sbjct: 284 EEIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNRLQSIGQKPVGCKIVVSKV--EEIE 341 Query: 202 LGLKSGIRYFDI--------AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR 253 +K+ + DI G GGT + E + + P S+ Sbjct: 342 TLVKTMVE-IDIYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKY 395 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 ++ + ASG L I ++ LGA L +A + Sbjct: 396 GIRDKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|90418883|ref|ZP_01226794.1| glutamate synthase, large subunit [Aurantimonas manganoxydans SI85-9A1] gi|90336963|gb|EAS50668.1| glutamate synthase, large subunit [Aurantimonas manganoxydans SI85-9A1] Length = 1577 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 38/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +V + +K V K+ Sbjct: 1027 HSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNVNPAADISVKLVSEVGVGTVAAGVAKAR 1086 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + ++G GGT S + S + S + + T +L M + GG Sbjct: 1087 ADHIIVSGYDGGTGASPMTSIKHAGSPWEMGLAE----TQQTLVM-NGLRDRVCLQVDGG 1141 Query: 267 LRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMDS-S 298 LR G D++ +LGA G ++ P L+ Sbjct: 1142 LRTGRDVIVGALLGADEFGFSTAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFKGAP 1201 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + +E + M +G + + EL + L+ Sbjct: 1202 EHVINYFFYVAEEVRMIMAEMGVRTMAELVGQSQLLE 1238 >gi|307269148|ref|ZP_07550505.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX4248] gi|307288714|ref|ZP_07568693.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0109] gi|30025892|gb|AAP04498.1| dihydroorotate dehydrogenase [Enterococcus faecalis] gi|306500327|gb|EFM69665.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0109] gi|306514526|gb|EFM83084.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX4248] gi|315032117|gb|EFT44049.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0017] gi|315035380|gb|EFT47312.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0027] gi|315166075|gb|EFU10092.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX1302] gi|329574587|gb|EGG56151.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX1467] Length = 322 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPSKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFARLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|291459995|ref|ZP_06599385.1| dihydroorotate oxidase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417336|gb|EFE91055.1| dihydroorotate oxidase [Oribacterium sp. oral taxon 078 str. F0262] Length = 303 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 106/325 (32%), Gaps = 69/325 (21%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERI--------------------NRNLAIAA 83 VD S E G KL P++ +S T G K + L A Sbjct: 2 VDLSTELSGLKLDNPVIPASGTFGYGKEFRELYDLNILGSIAIKGTTLKPRYGNELPRIA 61 Query: 84 EKT-KVAMAVGSQRVMFSD------HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 E + +VG Q + + F H +I+N+ + ++ Sbjct: 62 ECPSGMLNSVGLQNPGLRNVIEHELPELSEFF-------HKPVIANISGFSIAEY--IEL 112 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLS----SAMDVPLLLKEVG 192 A + V L L+++ G F + + L A P+ +K Sbjct: 113 AEEMDQVKNVGILELNVSCPN---VRGGGLAFGTDADNVYTLCCGVKKATKKPVYVKLSP 169 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSR--------IESHRDLESDIGIVFQDWGIP 244 + I + G G G S I+ R + + I Sbjct: 170 NVTDIVSIAKACEKG-------GADGISLINTLLGLRIDIQRRRTVLKNRMGGLSGPAIF 222 Query: 245 TPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 P++L M + I GG+ + D+++ ++ GAS + AM+ ++ ++ Sbjct: 223 -PVALRMVYQVRRAVKIPLIGMGGISSAEDVIEMMMAGASAVQIG------AMNLTEPLI 275 Query: 303 AAIESLRKEFIVSMFLLGTKRVQEL 327 + + +E LG +++ ++ Sbjct: 276 --CQRIIRELPEKCRELGIEKLSDI 298 >gi|260434387|ref|ZP_05788357.1| glutamate synthase [NADPH] large chain [Synechococcus sp. WH 8109] gi|260412261|gb|EEX05557.1| glutamate synthase [NADPH] large chain [Synechococcus sp. WH 8109] Length = 1533 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 34/180 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K V K+ I+G GGT S + S + S + G+ Sbjct: 1051 PVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSIKHAGSP-----WELGL 1105 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS--------------- 288 + + A GGL+ G D++ + +LGA G S Sbjct: 1106 TEVHRSLVENGLRDRVLLRADGGLKTGWDVVIAALLGAEEYGFGSIAMIAEGCVMARVCH 1165 Query: 289 ----PF--------LKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P L+ + VV + +E M LLG R++EL T L++ Sbjct: 1166 TNNCPVGVATQKENLRKRFTGIPEHVVNFFWYVAEEVRQLMSLLGVTRLEELIGRTDLLQ 1225 >gi|268316819|ref|YP_003290538.1| Glutamate synthase (ferredoxin) [Rhodothermus marinus DSM 4252] gi|262334353|gb|ACY48150.1| Glutamate synthase (ferredoxin) [Rhodothermus marinus DSM 4252] Length = 1511 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 60/189 (31%), Gaps = 37/189 (19%) Query: 170 DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESH 227 DL+ I L A + +K V K G I+G GGT S I S Sbjct: 1004 DLAQLIYDLKQANPTARISVKLVAEAGVGTIAAGVAKGGADVILISGHDGGTGASPITSI 1063 Query: 228 RDLESDIGIVFQDWGIP-TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + + G+ T +L +A G L+ G D+ + +LGA G Sbjct: 1064 LH-----AGLPWELGLSETHQAL-VANGLRERVVVEVDGQLQTGRDVAIAALLGAQEFGF 1117 Query: 287 ASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSMFL 318 A+ L K + V+ + +E M Sbjct: 1118 ATAPLVAIGCIRMRKCHLNTCPVGIATQDPELRKKFTGQPEHVINYFYFVAEELRQIMAQ 1177 Query: 319 LGTKRVQEL 327 LG + V+E+ Sbjct: 1178 LGFRTVEEM 1186 >gi|149190326|ref|ZP_01868599.1| glutamate synthase subunit alpha [Vibrio shilonii AK1] gi|148835815|gb|EDL52779.1| glutamate synthase subunit alpha [Vibrio shilonii AK1] Length = 1487 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + + + Sbjct: 997 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGCPWELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 T +L +A ++ + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1053 TQQAL-VANNLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A + VV L E + LG +++ +L T L+ Sbjct: 1112 NNCATGVATQDETLRKEYFKGLPEMVVNYFTGLADEVRELLAQLGVEKLTDLIGRTDLLE 1171 >gi|293570938|ref|ZP_06681983.1| dihydroorotate dehydrogenase [Enterococcus faecium E980] gi|291609001|gb|EFF38278.1| dihydroorotate dehydrogenase [Enterococcus faecium E980] Length = 314 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 99/327 (30%), Gaps = 52/327 (15%) Query: 45 DPSVEFLGKKLSFPLLISS----MT------GGNNKMIERINRNLAIAAEKTK------- 87 F + P + +S MT +++ I ++ I K Sbjct: 2 SLETTFANHTFANPFMNASGVHCMTTQELDELAHSEAGAFITKSCTINERKGNPEPRYFD 61 Query: 88 VAMA----VGSQRVMFSDH-NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 V + +G + FS + ++E Q P+ L ++ +Q+ + + Sbjct: 62 VPLGSINSMGLPNLGFSYYLEYALAYEKAQKNPNQPLFFSI------AGMSIQENLEMLG 115 Query: 143 VLGADGL----FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGL 195 + G L+L+ +P +F + + S PL +K Sbjct: 116 EIEKSGFKGITELNLSCPNVPGKPQLAYDFEATYETLKEVFSIFSKPLGIKLPPYFDFAH 175 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTPLSLEM 251 ++ + + Y + G + F G PT L Sbjct: 176 FDQMADILNQFPLTYVNAINSVGNGLYIDTDKEAVVIKPKEGFGGIGGEYIKPTA--LAN 233 Query: 252 ARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIES 307 R + E Q I +GG+R G D + ++ GAS+ + + K + + Sbjct: 234 VRAFYTRLKPEIQIIGTGGIRTGQDAFEHLLCGASMLQIGTELHK---EGPE----IFSR 286 Query: 308 LRKEFIVSMFLLGTKRVQELYLNTALI 334 + E M G + E I Sbjct: 287 ITNELTQIMSEKGYASIDEFKGKLRTI 313 >gi|227519367|ref|ZP_03949416.1| dihydroorotate oxidase [Enterococcus faecalis TX0104] gi|227073193|gb|EEI11156.1| dihydroorotate oxidase [Enterococcus faecalis TX0104] Length = 322 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 104/323 (32%), Gaps = 58/323 (17%) Query: 45 DPSVEFLGKKLSFPLL----ISSMTGGNNKMIERINRNLAIAAEKTKVAMA---VGSQRV 97 D SVEF G KL+ L+ I MT I +AA + +A + R Sbjct: 13 DISVEFSGHKLANVLMNASGIHCMT---------IKEMDELAASQAGAFVAKTETPNPRQ 63 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLF 150 + + L + NLG + +F + +V + + Sbjct: 64 GNEEPRYFDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENI 120 Query: 151 LHLNPLQEI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 L +QE +P +F + + PL +K Sbjct: 121 AILKKVQESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFF 180 Query: 195 LSS---MDIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPL 247 + E+ K + Y + G + E + G + ++ PT L Sbjct: 181 DIAHFDAMAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTAL 240 Query: 248 S--LEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 + A+ E + I +GG+ G D+ + ++ GA+L + + + + Sbjct: 241 ANVRAFAQRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVF 293 Query: 306 ESLRKEFIVSMFLLGTKRVQELY 328 E L KE M G + ++E Sbjct: 294 ERLAKELQEIMAAKGYESIEEFR 316 >gi|169341152|ref|ZP_02863245.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens C str. JGS1495] gi|169299759|gb|EDS81811.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens C str. JGS1495] Length = 355 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 94/273 (34%), Gaps = 42/273 (15%) Query: 58 PLLISSMT-------GGNNKMIERINRNLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFE 109 PL+I ++T GG + N LA A K + + G+Q Sbjct: 5 PLIIGNLTARLPIIQGGMGIGVSLSN--LASAVTKAGGIGIISGAQPGYLE--------- 53 Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH----VLGADGLFLHLNPLQEIIQPNGN 165 + + L +NL A++ + +K+ + ++ + H+ + + Sbjct: 54 --EDFKNNPLEANLRALKKHIRIAKEKSQNGIIGVNLMVAMNNYAEHVKAAID-SGVDLI 110 Query: 166 TNFADLSSKIALLSSAMDVPL--LLKEVGCGLSSMDIELG----LKSGIRYFDIAG--RG 217 + A L S + + +V + ++ + I K I G G Sbjct: 111 ISGAGLPSHLPKFTKGSNVKIAPIVSSLKAA---KVILKLWDRHHKVSPDMIVIEGPKAG 167 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 G ES D D I S+ Y + I +GG+ +G DI K + Sbjct: 168 GHLGFTKESLEDESKKFDSTILD--IIKETSIYE-DKYEKKIPIIVAGGIFDGKDIAKYL 224 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 LGAS +A+ F+ A DA + E+ Sbjct: 225 KLGASGVQMATRFV--ATYECDANIKFKEAYIN 255 >gi|23466056|ref|NP_696659.1| inosine 5-monophosphate dehydrogenase [Bifidobacterium longum NCC2705] gi|189439262|ref|YP_001954343.1| inosine 5-monophosphate dehydrogenase [Bifidobacterium longum DJO10A] gi|239621365|ref|ZP_04664396.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132638|ref|YP_003999977.1| alpha-hydroxy acid/malate/lactate dehydrogenase [Bifidobacterium longum subsp. longum BBMN68] gi|317482863|ref|ZP_07941871.1| IMP dehydrogenase [Bifidobacterium sp. 12_1_47BFAA] gi|322689313|ref|YP_004209047.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis 157F] gi|322691325|ref|YP_004220895.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. longum JCM 1217] gi|23326781|gb|AAN25295.1| GMP reductase [Bifidobacterium longum NCC2705] gi|189427697|gb|ACD97845.1| alpha-hydroxy acid/malate/lactate dehydrogenase [Bifidobacterium longum DJO10A] gi|239515826|gb|EEQ55693.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773589|gb|ADQ03077.1| Alpha-hydroxy acid/malate/lactate dehydrogenase [Bifidobacterium longum subsp. longum BBMN68] gi|316915708|gb|EFV37122.1| IMP dehydrogenase [Bifidobacterium sp. 12_1_47BFAA] gi|320456181|dbj|BAJ66803.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. longum JCM 1217] gi|320460649|dbj|BAJ71269.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis 157F] Length = 374 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S +++ Sbjct: 179 NLKKFIYDLDVPVI---VGGASNYTAALHLMRTGAAGVLV-GFGGGAVSATRQTIGVQAP 234 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K++ LGA L Sbjct: 235 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLG 286 Query: 288 SPFLKP 293 +P + Sbjct: 287 APLARA 292 >gi|319943797|ref|ZP_08018078.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC 51599] gi|319743030|gb|EFV95436.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC 51599] Length = 488 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 18/127 (14%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + ++ + D+ ++ + G + + +G + G+ + Sbjct: 253 HSRGVIERVREIKRHYPDLQVIAGNIATG---DAARMLVDAGADAVKVGIGPGSICTT-- 307 Query: 226 SHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + G+P T + A + IA GG+R D+ K+I GAS Sbjct: 308 ----------RIVAGVGVPQLTAVGDVAAALQGTDVPLIADGGIRYSGDVAKAIAAGASS 357 Query: 284 GGLASPF 290 + S F Sbjct: 358 VMMGSIF 364 >gi|302036455|ref|YP_003796777.1| dihydroorotate dehydrogenase [Candidatus Nitrospira defluvii] gi|300604519|emb|CBK40851.1| Dihydroorotate dehydrogenase [Candidatus Nitrospira defluvii] Length = 308 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 107/311 (34%), Gaps = 41/311 (13%) Query: 45 DPSVEFLGKKLSFPLLISS----------MTGGNNKMIERINRNLAIAAEKTK-----VA 89 D SV G K + +S +T G ++ + +++ + Sbjct: 2 DLSVTIAGVKFPTCFMNASGALCVTREELITLGRSRAGAIVTKSMTLEPRVGNPEPRYYG 61 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH-----QAVHVL 144 GS M + + R YA ++ G + G+ + +A++ Sbjct: 62 FTGGSINSM-----GLPNLGYRAYAEMIPELTRFGKPVIASIAGLCEDDFLTMARAINQA 116 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC---GLSSMDIE 201 D + ++L+ +P + D + + + VP+ +K ++ E Sbjct: 117 RPDLIEVNLSCPNIPGKPQIAYDPVDSERLLKRVRPLITVPMGVKLPPYFDPAHHAVMAE 176 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDL--ESDIGIVFQDWGIPTPLSLEMARPY---- 255 + + G+ Y ++ G H + G + P++L R + Sbjct: 177 VIRRCGVDYLNLINSVGNGLVVDPKHETPVIKPKGGFGGLGGSLIKPVALANVRAFWKLL 236 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 I +GG+ GVD + ++ GAS + + + + VA E L +E Sbjct: 237 EGRIPIIGTGGVVQGVDAFEHVLCGASAVQVGTALV-------EEGVAVFERLERELTAE 289 Query: 316 MFLLGTKRVQE 326 + + G + ++E Sbjct: 290 LAMRGKQSLEE 300 >gi|302384207|ref|YP_003820030.1| glutamate synthase (ferredoxin) [Brevundimonas subvibrioides ATCC 15264] gi|302194835|gb|ADL02407.1| Glutamate synthase (ferredoxin) [Brevundimonas subvibrioides ATCC 15264] Length = 1505 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 32/182 (17%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 D + +K V K+ IAG G + + +S + + G Sbjct: 1028 DARVTVKLVSASGIGAIASGVAKAKADVILIAGHNGGTGASPQSSI----KHAGLPWEIG 1083 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + + A GG+R G DI+ + ILGA + + L Sbjct: 1084 LAETHQVLSLNNLRSHVVVRADGGMRTGRDIVIAAILGAEEFNIGTASLIAMGCLMVRQC 1143 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 ++D VV + +E + +LG + + E+ T L+ Sbjct: 1144 HSNTCPVGVCSQDPRLREKFTGTADKVVNLFSFIAEEVREYLAMLGARSLDEIVGRTDLL 1203 Query: 335 RH 336 R Sbjct: 1204 RQ 1205 >gi|119719971|ref|YP_920466.1| GMP reductase [Thermofilum pendens Hrk 5] gi|119525091|gb|ABL78463.1| inosine-5'-monophosphate dehydrogenase [Thermofilum pendens Hrk 5] Length = 349 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 97/362 (26%), Gaps = 98/362 (27%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFL-GKKLSFPLLISSM-TGGNNKMIERINRNLAIA 82 FDD L+ + ++ DEVD S L P++ S M T +M ++ + Sbjct: 16 SFDDVLLVPK-YSDVRIDEVDVSTRLTKNLLLKIPIISSPMDTVTGFEMARKLGELGGLG 74 Query: 83 AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVH 142 + + +A+ + + + + G + Sbjct: 75 VLPRNIPL------------DAVVEYVKKISGENLPV---------GVAVGPFDDERVSK 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L A + ++ + + ++ + G+ + + Sbjct: 114 ALDAGASIIVIDTA--------HGHSRNVLEATRRYA--------------GMGAEVMAG 151 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY--CNEAQ 260 + + D+ G G S + G P ++ + Sbjct: 152 NIVTAEAALDLIGAGAVSLRV--GVGPGHACTTREVAGVGYPQLSAVAKVADAARSHGVS 209 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL----------------------------- 291 +A GG+ DI+K++ GA + L Sbjct: 210 VVADGGIEKPADIVKALAAGADAV-MLGYLLAGSDEAPGHVVVRGGECFKVYRGMGSRGA 268 Query: 292 -----------KPAMDSSDAVV-------AAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K + + +V +E L M +G + ++EL + Sbjct: 269 LRSGSTRYGEFKRVPEGVEGLVPCRGPVEGVVEFLVNGLKQGMGYVGARNLEELRVKAEF 328 Query: 334 IR 335 +R Sbjct: 329 VR 330 >gi|239906876|ref|YP_002953617.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus RS-1] gi|239796742|dbj|BAH75731.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus RS-1] Length = 485 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 72/259 (27%), Gaps = 74/259 (28%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + + +L A FL L+ + + ++ I + + L+ Sbjct: 221 AIGVGGDRGERVQALLDAGADFLVLDSA--------HGHSKNILESIRAIKAEHPGCQLV 272 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G + + + +G + G+ + V G+P + Sbjct: 273 --AGNVGTYEGAKALIAAGADAVKVGIGPGSICTT------------RVVAGVGVPQVTA 318 Query: 249 LEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF---------------- 290 + A C EA + IA GG++ DI+K+I G + F Sbjct: 319 IMEASRACREAGKRIIADGGVKFSGDIVKAIAAGGDTVMMGGLFAGTEESPGETVLYQGR 378 Query: 291 ---LKPAMDSSDA-------------------------------VVAAIESLRKEFIVSM 316 + M S DA V +I L M Sbjct: 379 TYKIYRGMGSIDAMREGSSDRYFQEKTKKLVPEGIVGRVPFKGPVTDSIYQLVGGLRSGM 438 Query: 317 FLLGTKRVQELYLNTALIR 335 G ++EL +R Sbjct: 439 GYCGCNTIEELQQKARFVR 457 >gi|238018438|ref|ZP_04598864.1| hypothetical protein VEIDISOL_00264 [Veillonella dispar ATCC 17748] gi|237864909|gb|EEP66199.1| hypothetical protein VEIDISOL_00264 [Veillonella dispar ATCC 17748] Length = 1527 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 61/221 (27%), Gaps = 38/221 (17%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLK 205 H P E++ P + + + L+ D + +K K Sbjct: 991 ARHSTPGVELVSPPPHHDIYSIEDLAELIYDLKCINKDARISVKLTSEAGVGTIAAGVAK 1050 Query: 206 SGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 + I+G GGT + V + G+ M + + Sbjct: 1051 AKADNILISGYDGGTGAAG-----RTSVKHAGVPWELGLSETHQTLMLNRLRDRVKLEVD 1105 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MD 296 L G D+ + +LGA L G + L Sbjct: 1106 SKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMARVCNLNTCPYGVATQDEKLRARFTG 1165 Query: 297 SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ 337 + V + + +E M LG + V EL L+R + Sbjct: 1166 KPEYVENLMIFIARELREIMARLGIRSVAELVGRIDLVRQK 1206 >gi|163734323|ref|ZP_02141763.1| glutamate synthase, large subunit [Roseobacter litoralis Och 149] gi|161392331|gb|EDQ16660.1| glutamate synthase, large subunit [Roseobacter litoralis Och 149] Length = 1507 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1019 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1074 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + +LGA G+ + L Sbjct: 1075 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQC 1134 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + + Sbjct: 1135 QSNTCPVGVCTQDEALRDKFTGNADKVVNLITFYASEVREILAQIGARSLDD 1186 >gi|315044921|ref|XP_003171836.1| glutamate synthase [Arthroderma gypseum CBS 118893] gi|311344179|gb|EFR03382.1| glutamate synthase [Arthroderma gypseum CBS 118893] Length = 2132 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI + +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYIANELRAIMAKLGFRSVNEMVGRAELLK 1250 >gi|296116804|ref|ZP_06835410.1| dihydroorotate dehydrogenase 2 [Gluconacetobacter hansenii ATCC 23769] gi|295976605|gb|EFG83377.1| dihydroorotate dehydrogenase 2 [Gluconacetobacter hansenii ATCC 23769] Length = 352 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 84/229 (36%), Gaps = 20/229 (8%) Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGN 165 S R + +NLG + D + D + ++L+ Sbjct: 128 SASGRHVGAKVPVGANLGINKTGADPERDYPLLVGRIKNYVDYIVINLSSPN-TPGLRDL 186 Query: 166 TNFADLSSKIALLSSAMDV--PLLLK---EVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 A L S + +++A PLL+K ++ +E + G + + T+ Sbjct: 187 LESARLKSILDAIAAAHPERPPLLVKLSPDMARDDIPDVVEAAIAGGAQGLIVTN---TT 243 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLS---LEMARPYCNEAQFIASGGLRNGVDILKSI 277 SR S R +++ + +AR +A GG+ +G DI++ + Sbjct: 244 ISRPRSLRSADANETGGLSGRPLTPLACDTLAHVARAANRRLTLVACGGIESGADIVERV 303 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 +GA L L + A + A + L++E + ++ L G + + + Sbjct: 304 RMGADLVQL---YTAYAYEGP----AIVSRLKRETLTALRLQGFETLSD 345 >gi|291456901|ref|ZP_06596291.1| IMP dehydrogenase family protein [Bifidobacterium breve DSM 20213] gi|291382178|gb|EFE89696.1| IMP dehydrogenase family protein [Bifidobacterium breve DSM 20213] Length = 374 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S +++ Sbjct: 179 NLKKFIYDLDVPVI---VGGASNYTAALHLMRTGAAGVLV-GFGGGAVSATRQTIGVQAP 234 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K++ LGA L Sbjct: 235 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLG 286 Query: 288 SPFLKP 293 +P + Sbjct: 287 APLARA 292 >gi|146278814|ref|YP_001168973.1| glutamate synthase (ferredoxin) [Rhodobacter sphaeroides ATCC 17025] gi|145557055|gb|ABP71668.1| glutamate synthase (NADPH) large subunit [Rhodobacter sphaeroides ATCC 17025] Length = 1512 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 51/170 (30%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VTVKLVAASGVGTIAAGVAKAKADVILISGHNGGTGASP----GTSIKYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------------- 291 + GGLR G DI+ + ++GA G+ + L Sbjct: 1083 AHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 292 ----------KPAMD----SSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K D S+D VV I +E + +G + + E+ Sbjct: 1143 TCPVGVCTQDKALRDKFSGSADKVVNLITFYAQEVREILASIGARSMDEI 1192 >gi|328914758|gb|AEB55591.1| inosine-5-monophosphate dehydrogenase [Chlamydophila psittaci 6BC] Length = 371 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 99/380 (26%), Gaps = 101/380 (26%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEF-LGKKLSFPLLISSMTGGNNKMI 72 R FDD L + E+ E S LS P+L ++M Sbjct: 8 LHFENYMREALTFDDVLLKPQ-YSEVLPQETCLSSSVSKSLPLSIPILSAAM-------- 58 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVM---FSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ + +A+A G V + +++ + +G Q Sbjct: 59 ----DSITEFSMARGIAVAGGLGVVHKNLTVNEQVSVVKQIKSQDASFAVGCAVGVGQQG 114 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLK 189 ++ V L D H + L + P + Sbjct: 115 WERADMLVEAGVDALVVDTAHGH---------------SRLVLDTAEYLKK--NYPEVTL 157 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 VG +S + G+ + G+ + + G+P ++ Sbjct: 158 IVGNIVSREAALCLAEIGVDAVKVGIGPGSICTT------------RIVSGVGVPQLTAI 205 Query: 250 EMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------------- 291 + + IA GG+R DI+K++ GA + L Sbjct: 206 MDVVEALRGSSVRIIADGGMRYSGDIVKALAAGAHCV-MLGSMLAGTNETPGDIVHVHGQ 264 Query: 292 -----------------------------KPAMDSSDAVV-------AAIESLRKEFIVS 315 K + + +V + + Sbjct: 265 AYKMYRGMGSQGAMEKGSAERYFQECNAKKFVPEGVEGLVPYKGSLDDVLYQILGGLRSG 324 Query: 316 MFLLGTKRVQELYLNTALIR 335 M LG + ++EL N +R Sbjct: 325 MGYLGARNLEELQKNAVFVR 344 >gi|330918111|ref|XP_003298091.1| hypothetical protein PTT_08692 [Pyrenophora teres f. teres 0-1] gi|311328918|gb|EFQ93826.1| hypothetical protein PTT_08692 [Pyrenophora teres f. teres 0-1] Length = 2142 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S + +K V + K+ Sbjct: 1044 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSETGVGIVASGVAKAK 1103 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1104 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQ 1158 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1159 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFAGTP 1218 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + ++ Sbjct: 1219 EHVINFFYYIANELRAIMAKLGFRTINDM 1247 >gi|254796884|ref|YP_003081721.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str. Illinois] gi|254590120|gb|ACT69482.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str. Illinois] Length = 481 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 52/146 (35%) Query: 242 GIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPF--------- 290 G+P ++ C + + IA GG+R DI K++ GA + S F Sbjct: 309 GVPQFTAILNVASVCKKTDVKVIADGGIRYSGDIAKALAAGADCVMIGSLFAGTDESPGE 368 Query: 291 ----------------------------------LKPAMDSSDAVV-------AAIESLR 309 +K + + +V + L Sbjct: 369 VILYKGRSYKSYRGMGSVGAMSTGSSDRYFQNSSMKLVPEGVEGLVPLKGALSETVYQLV 428 Query: 310 KEFIVSMFLLGTKRVQELYLNTALIR 335 SM G K + E+ N + I Sbjct: 429 GGVRSSMGYTGCKNIYEMKNNCSFIH 454 >gi|307708952|ref|ZP_07645412.1| dihydroorotate dehydrogenase [Streptococcus mitis SK564] gi|307620288|gb|EFN99404.1| dihydroorotate dehydrogenase [Streptococcus mitis SK564] Length = 311 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F + + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILTEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMAEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|296330117|ref|ZP_06872599.1| putative flavoenzyme [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673362|ref|YP_003865034.1| putative flavoenzyme [Bacillus subtilis subsp. spizizenii str. W23] gi|296152706|gb|EFG93573.1| putative flavoenzyme [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411606|gb|ADM36725.1| putative flavoenzyme [Bacillus subtilis subsp. spizizenii str. W23] Length = 525 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 58/193 (30%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + + + A +L G + V V ++ P + I PN F Sbjct: 248 EEFKRKSRLDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDSPNRFYEF 307 Query: 169 ADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGLKS------GIRYFDIAGR-GG 218 + + + DV P+ +K V ++ + I G GG Sbjct: 308 SSAPEMLDFIEKLRDVGQKPVGIKLVAG--HPEELHELFSYMQKSGKHPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I P +L + + ASG L I ++ Sbjct: 366 TGASFYELADTVGLPIMTAL-----PIVDTLLRQYGLRGQLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|145238840|ref|XP_001392067.1| glutamate synthase [NADPH] [Aspergillus niger CBS 513.88] gi|134076567|emb|CAK39758.1| unnamed protein product [Aspergillus niger] Length = 2126 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 64/214 (29%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1043 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1102 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1103 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQLRT 1157 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS-DAV 301 G D+ + +LGA G A+ P L+ + + V Sbjct: 1158 GRDLAVACLLGAEEFGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPALRAKFQGTPEHV 1217 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + V E+ L+R Sbjct: 1218 INFFYYVANEMRAIMAKLGVRTVNEMVGRAELLR 1251 >gi|83945240|ref|ZP_00957589.1| inosine-5'-monophosphate dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83851410|gb|EAP89266.1| inosine-5'-monophosphate dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 490 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/382 (12%), Positives = 109/382 (28%), Gaps = 118/382 (30%) Query: 61 ISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV------MFSDHNAIKSFELRQYA 114 ++ +T + K + L + + + + G + V + ++ + F Sbjct: 93 VNPIT-ISPKATLAELQALMNHHKISGIPVVEGGEGVNGKLVGIITNRDVR--FADDMNQ 149 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVH--------VLGADGLFLHLNPLQEIIQPNGNT 166 P + L+++ G V + +A + +H V+ +G + L ++++++ Sbjct: 150 PVSSLMTHEGLVTVKPGVDQGEARRLLHKHRIERLLVVDDEGHCVGLMTVKDMVKAEAYP 209 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 N A +++A V + + +G+ I G S S +E Sbjct: 210 NAAKDEHGRLRVAAATTV--------GDAGFERAQALIDAGVDAVVIDTAHGMSASVLEQ 261 Query: 227 HRDLES---------------DIGIVFQDWGIPTPL-----------------------S 248 R +++ D D G T + Sbjct: 262 VRRIKAASNSTQVVAGNVATYDGARALFDVGADTVKVGIGPGSICTTRIVAGVGVPQLTA 321 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLAS-----------PFL---- 291 + R + + IA GG++ D+ K+I GA + S FL Sbjct: 322 IMECRRAADGFDGSIIADGGIKYSGDLAKAIAAGADCVMMGSMLAGTEEAPGETFLYKGR 381 Query: 292 -------------------------------KPAMDSSDA-------VVAAIESLRKEFI 313 K + + V + + Sbjct: 382 AYKSYRGMGSVGAMARGSADRYFQKEVTDRMKLVPEGIEGQVPYKGPVAPILHQMVGGLR 441 Query: 314 VSMFLLGTKRVQELYLNTALIR 335 +M G + +++ +R Sbjct: 442 AAMGYTGARTIKDFQQKAEFVR 463 >gi|310639413|ref|YP_003944172.1| glutamate synthase large subunit [Ketogulonicigenium vulgare Y25] gi|308752989|gb|ADO44133.1| glutamate synthase large subunit [Ketogulonicigenium vulgare Y25] Length = 1812 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E+I P + + + L+ + A V +++K V K+G + Sbjct: 1110 PGVELISPPPHHDTYSIEDLGQLIHDAKAARVRVVVKLVSSEGIGTIAVGVAKAGADVIN 1169 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG ++ G Sbjct: 1170 VAGNTGGTGAASVTSLKYTGRA-----AEIGIAEVHQALCANAIRQKVSLRCSGAMQTGS 1224 Query: 272 DILKSIILGAS---LGGLASPFLKPAM--------------------DSSDAVVAAIESL 308 D++K+ +LG G A LK M A+ + ++ Sbjct: 1225 DVVKAALLGGDSFEFGTTALMMLKCVMAKNCNVKCPAGLTTNPEVFDGDPRALAQYLLNI 1284 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + E L+ Sbjct: 1285 AHEVREILANLGLSSLAEARGRADLLH 1311 >gi|294010226|ref|YP_003543686.1| glutamate synthase (NADPH) large chain [Sphingobium japonicum UT26S] gi|292673556|dbj|BAI95074.1| glutamate synthase (NADPH) large chain [Sphingobium japonicum UT26S] Length = 1507 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 108/359 (30%), Gaps = 68/359 (18%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 +++ A+P DEV+ + E K+ P M+ G LAIA + Sbjct: 855 EFNFAREAVP---IDEVEATTEI-RKRFVTP----GMSLGALSPEAH--ETLAIAMNRIG 904 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF--GVQKAHQAV---- 141 G D N K +E A + G ++ ++ ++ V Sbjct: 905 AKAVSGEGG---EDANRFKPYENGDNANSVIKQIASGRFGVHAEYLGSAEEIEIKVAQGA 961 Query: 142 -----------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL--SSAMD--VPL 186 V H P +I P + + + L+ ++ + Sbjct: 962 KPGEGGQLPGFKVTEFIAKLRHATPGVTLISPPPHHDIYSIEDLAQLIYDCKMINPRARV 1021 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K V K+ +AG GGT S S + G+ Sbjct: 1022 CVKLVSQAGIGTVAAGVAKAHADVILVAGHVGGTGASPQTSV-----KYAGTPWEMGLSE 1076 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + + GGL+ G DI+ + ILGA G+ + L Sbjct: 1077 ANQVLTLNGLRHRVKLRTDGGLKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQCHSN 1136 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + + +E + LG + + E+ T L++ Sbjct: 1137 TCPVGVCVQDERLREKFTGTPEKVINLMTFIAEEVREILARLGYRSLDEVIGRTELLKQ 1195 >gi|83953164|ref|ZP_00961886.1| glutamate synthase, large subunit [Sulfitobacter sp. NAS-14.1] gi|83842132|gb|EAP81300.1| glutamate synthase, large subunit [Sulfitobacter sp. NAS-14.1] Length = 1510 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYATEVRELLASIGARSLDD 1189 >gi|227541807|ref|ZP_03971856.1| inositol-5-monophosphate dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182250|gb|EEI63222.1| inositol-5-monophosphate dehydrogenase [Corynebacterium glucuronolyticum ATCC 51866] Length = 533 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 31/194 (15%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + A + + +G YD G Q L D H N E++ +F D Sbjct: 248 KDEAGRLRVAAGVGTNTDAYDRGAQLIEAGCDALVVDTAHAHNNFALEMV-ARLKKDFGD 306 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + I G + + + +G + G+ + Sbjct: 307 RAQIIG---------------GNLATRSAAQAMIDAGADAIKVGIGPGSICTT------- 344 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G P ++ A ++ IA GG++ D+ K++ GAS + Sbjct: 345 -----RVVAGVGAPQITAILEASAAAHKAGVPVIADGGMQYSGDVAKALAAGASTV-MLG 398 Query: 289 PFLKPAMDSSDAVV 302 L ++ V+ Sbjct: 399 SMLAGTTEAPGDVI 412 >gi|227487030|ref|ZP_03917346.1| inositol-5-monophosphate dehydrogenase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093104|gb|EEI28416.1| inositol-5-monophosphate dehydrogenase [Corynebacterium glucuronolyticum ATCC 51867] Length = 533 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 31/194 (15%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + A + + +G YD G Q L D H N E++ +F D Sbjct: 248 KDEAGRLRVAAGVGTNTDAYDRGAQLIEAGCDALVVDTAHAHNNFALEMV-ARLKKDFGD 306 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + I G + + + +G + G+ + Sbjct: 307 RAQIIG---------------GNLATRSAAQAMIDAGADAIKVGIGPGSICTT------- 344 Query: 231 ESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 V G P ++ A ++ IA GG++ D+ K++ GAS + Sbjct: 345 -----RVVAGVGAPQITAILEASAAAHKAGVPVIADGGMQYSGDVAKALAAGASTV-MLG 398 Query: 289 PFLKPAMDSSDAVV 302 L ++ V+ Sbjct: 399 SMLAGTTEAPGDVI 412 >gi|227514164|ref|ZP_03944213.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus fermentum ATCC 14931] gi|227087535|gb|EEI22847.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus fermentum ATCC 14931] Length = 324 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 92/280 (32%), Gaps = 45/280 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD LI S E DP V+F K P++ M IN LA+ A Sbjct: 6 YDDIQLIPNKCVIKSRKEADPQVKFGPKTFKIPVV-------PANMASVINEELAVWLAQ 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M + F +++ + S +G YDF Q Sbjct: 59 NDYYYVM-------HRFNPADRAGF-VKRMHDRGLFASISVGIKDSEYDFINQLKD---E 107 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + +G+++F + + I + + L G + + Sbjct: 108 QLVPEYITIDV--------AHGHSDF--VIAMIKHIKQQLPTTFLT--AGNVATPEAVRD 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L + + I Sbjct: 156 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRLCSKAARK-PLI 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R+ DI KS+ GAS+ + L +S ++ Sbjct: 205 ADGGIRHNGDIAKSVRFGASMV-MIGSLLAGHQESPGNLI 243 >gi|213691936|ref|YP_002322522.1| IMP dehydrogenase family protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523397|gb|ACJ52144.1| IMP dehydrogenase family protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458043|dbj|BAJ68664.1| inositol-5-monophosphate dehydrogenase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 374 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S +++ Sbjct: 179 NLKKFIYDLDVPVI---VGGASNYTAALHLMRTGAAGVLV-GFGGGAVSATRQTIGVQAP 234 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K++ LGA L Sbjct: 235 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLG 286 Query: 288 SPFLKP 293 +P + Sbjct: 287 APLARA 292 >gi|154687319|ref|YP_001422480.1| guanosine 5'-monophosphate oxidoreductase [Bacillus amyloliquefaciens FZB42] gi|166215318|sp|A7Z8C3|GUAC_BACA2 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|154353170|gb|ABS75249.1| GuaC [Bacillus amyloliquefaciens FZB42] Length = 326 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 92/267 (34%), Gaps = 42/267 (15%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AA 83 ++D LI + + + S E D SV G P++ M I+ N+A A Sbjct: 7 YEDIQLIPAKCIVD-SRSECDTSVTLGGHTFKLPVV-------PANMQTIIDENIAAWLA 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV 143 E + + +F Q LIS++ D+ + +A + Sbjct: 59 ENGYF------YIMHRFEPEKRLAF--VQDMKARGLISSISVGVKENDYEFIRELKAQEL 110 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + D + + + +G++N + S I + + ++ G + + Sbjct: 111 V-PDYITIDI--------AHGHSNA--VISMIQFIKEHVPESFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 ++G + G + G W + +L ++ IA Sbjct: 158 ERAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPF 290 GG+R DI KSI GAS+ + S F Sbjct: 207 DGGIRTHGDIAKSIRFGASMVMIGSLF 233 >gi|83942109|ref|ZP_00954571.1| glutamate synthase, large subunit [Sulfitobacter sp. EE-36] gi|83847929|gb|EAP85804.1| glutamate synthase, large subunit [Sulfitobacter sp. EE-36] Length = 1510 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYATEVRELLASIGARSLDD 1189 >gi|330501501|ref|YP_004378370.1| glutamate synthase subunit alpha [Pseudomonas mendocina NK-01] gi|328915787|gb|AEB56618.1| glutamate synthase subunit alpha [Pseudomonas mendocina NK-01] Length = 1460 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S R + + + Sbjct: 974 VSVKLVAEAGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIRYAGAPWELGLAE---- 1029 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 T +L + + GGL+ G+D++K+ ILGA G +P + Sbjct: 1030 THQTLR-GNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1088 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + V+ + +E + LG + ++EL T L+ Sbjct: 1089 NNCATGVATQNDKLRKDHFIGTVEMVMNFFTYVAEETREWLAKLGVRSLEELIGRTDLLE 1148 >gi|315426100|dbj|BAJ47746.1| inosine monophosphate dehydrogenase [Candidatus Caldiarchaeum subterraneum] Length = 492 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 88/306 (28%), Gaps = 106/306 (34%) Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 A Q+ V+K GL + +++++ PN + + ++++A+ V Sbjct: 181 AKQIFMKHKVEKLPLVDSEWNIKGLITSADIVKKLMHPNASRDSRGRL----MVAAAIGV 236 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT-----------------------SW 221 + + L + D+A G T + Sbjct: 237 R------EEAMDRAEALLAAGADCLVIDVA-HGHTDMVINLIKQLRRSFGEDFELVAGNV 289 Query: 222 SRIESHRDLESDIGI---------------VFQDWGIPTPLSLEMARPYCN--EAQFIAS 264 + E DL + V G+P ++ IA Sbjct: 290 ATAEGVEDLAAAGASGVKVGVGPGSVCTTRVVAGVGVPQLTAIMDCAETAEAMGVPIIAD 349 Query: 265 GGLRNGVDILKSIILGASLG----------------------------GLASP------- 289 GG+R+ D++K++ GAS G+AS Sbjct: 350 GGIRSSADLVKALAAGASTVMIGRLLAGTDESPGAVVVKNGRKMKVYRGMASFYAMLAKE 409 Query: 290 -------FLKPAMDSS---DAVVAA----------IESLRKEFIVSMFLLGTKRVQELYL 329 FL+ A + S + V A ++ L + LG ++EL Sbjct: 410 SRAGDEDFLQDASEYSFIAEGVEAYVPYKGSASDVVKQLVAGLRSGLSYLGASNIKELQR 469 Query: 330 NTALIR 335 N IR Sbjct: 470 NAVFIR 475 >gi|242015925|ref|XP_002428593.1| ferredoxin-dependent glutamate synthase 2, putative [Pediculus humanus corporis] gi|212513237|gb|EEB15855.1| ferredoxin-dependent glutamate synthase 2, putative [Pediculus humanus corporis] Length = 2068 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 68/199 (34%), Gaps = 41/199 (20%) Query: 170 DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGT---SWSRI 224 DL+ I L S+ + +K V + K + I+G GGT SW+ I Sbjct: 1027 DLAQLIYDLKSSNPSARVSVKLVSEVGVGVVAAGVAKGKAEHIVISGHDGGTGASSWTGI 1086 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 ++ + + GI + + + A G LR G D++ + +LGA Sbjct: 1087 KN--------AGLPWELGIAETHQVLVLNNLRSRVVLQADGQLRTGFDVVVAALLGADEF 1138 Query: 285 GLASPFL----------------------------KPAMDSSDAVVAAIESLRKEFIVSM 316 G ++ L K + V+ L +E M Sbjct: 1139 GFSTAPLIVMGCTMMRKCHLNTCPVGVATQDPVLRKKFAGKPEHVINYFFLLAEEIRSHM 1198 Query: 317 FLLGTKRVQELYLNTALIR 335 LG + Q+L T L+R Sbjct: 1199 AKLGISKFQDLIGRTDLLR 1217 >gi|15673127|ref|NP_267301.1| guanosine 5'-monophosphate oxidoreductase [Lactococcus lactis subsp. lactis Il1403] gi|45476973|sp|Q9CGF1|GUAC_LACLA RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|12724108|gb|AAK05243.1|AE006347_1 GMP reductase [Lactococcus lactis subsp. lactis Il1403] gi|326406691|gb|ADZ63762.1| GMP reductase [Lactococcus lactis subsp. lactis CV56] Length = 329 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 44/288 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV+ P++ M I+ +A K Sbjct: 10 YEDIQLIPNKCVINSRLEADTSVKLGNFTFKLPVV-------PANMQTIIDDKIAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + + +F +++ ++ S GV+ A + + Sbjct: 63 EG-----YFYIMHRFEAENRAAF-IKKMHQQGLIAS--------ISVGVKADEHAFIREI 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLSSMDIEL 202 AD L E I + AD K L + ++ VG + + Sbjct: 109 SADALIP------EFITIDIAHGHADSVIKTIQLIKRLMPQTFVIAGNVG---TPEAVRE 159 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +++ ++ I Sbjct: 160 LENAGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AAVKWCAKAASK-PVI 208 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 A GG+R DI KSI +GA++ + S F V + ++ Sbjct: 209 ADGGIRTHGDIAKSIRMGATMVMVGSLFAAHEESPGQTVERDGQLFKE 256 >gi|83950648|ref|ZP_00959381.1| glutamate synthase, large subunit [Roseovarius nubinhibens ISM] gi|83838547|gb|EAP77843.1| glutamate synthase, large subunit [Roseovarius nubinhibens ISM] Length = 1508 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 32/169 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1024 VTVKLVAQSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMGLTE 1079 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1080 AHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1139 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I +E + +G + + E Sbjct: 1140 TCPVGVCTQDEALRDKFTGNADKVVNLITFYAQEVREVLASIGARSLDE 1188 >gi|301167986|emb|CBW27572.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 507 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 43/267 (16%) Query: 61 ISSMTGGN--NKMIERINR--NLAIAAEKTK--------------VAMAVGSQRVMFSDH 102 IS+M+ G+ +E +NR +L A+ T + +G+ DH Sbjct: 158 ISAMSYGSLSGNAVEALNRGASLGGFAQNTGEGSISDYHLKHGGHIIWQIGTGYFGARDH 217 Query: 103 NAIKSFELRQYAPHT------VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + +F ++ + ++ L G+ A + + + P Sbjct: 218 D--GNFSDELFSKNAKRESVKMIEIKLSQGAKPGHGGILPAKKNTPEI---ARIRGVKPY 272 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDV----PLLLKEVGCGL-SSMDI---ELGLKSGI 208 +I P G+T F + I + D+ P+ +K L D+ + + Sbjct: 273 TAVISPPGHTEFNNSEGLIKFIQRLRDLSGGKPIGIKLCFGKLHEFEDLCIKMKEMDNYP 332 Query: 209 RYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGL 267 Y + G GGT + +E L + + G+ +L ++ + I SG + Sbjct: 333 DYIVVDGGEGGTGAAPLEFSDSLGTPMTE-----GLVLVSNLLNKYGLKDQIKLIVSGKI 387 Query: 268 RNGVDILKSIILGASLGGLASPFLKPA 294 G I++++ LGA A + Sbjct: 388 ITGFHIVRALSLGADACYSARAMMLAL 414 >gi|303321988|ref|XP_003070988.1| Glutamate synthase , putative [Coccidioides posadasii C735 delta SOWgp] gi|240110685|gb|EER28843.1| Glutamate synthase , putative [Coccidioides posadasii C735 delta SOWgp] Length = 2137 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1056 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1115 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1116 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQLRT 1170 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS-DAV 301 G D+ + +LGA G A+ P L+ + + + V Sbjct: 1171 GRDVAIACLLGAEEWGFATAPLIAMGCIMMRKCHLGTCPVGIATQDPALREKFEGTPEHV 1230 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L+R Sbjct: 1231 INFFYYVANELRAIMAKLGMRTINEMVGRAELLR 1264 >gi|146305587|ref|YP_001186052.1| glutamate synthase subunit alpha [Pseudomonas mendocina ymp] gi|145573788|gb|ABP83320.1| glutamate synthase (NADPH) large subunit [Pseudomonas mendocina ymp] Length = 1482 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S R + + + Sbjct: 996 VSVKLVAEAGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIRYAGAPWELGLAE---- 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 T +L + + GGL+ G+D++K+ ILGA G +P + Sbjct: 1052 THQTLR-GNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1110 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + + V+ + +E + LG + ++EL T L+ Sbjct: 1111 NNCATGVATQNDKLRKDHFIGTVEMVMNFFTYVAEETREWLAKLGVRSLEELIGRTDLLE 1170 >gi|209559655|ref|YP_002286127.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes NZ131] gi|209540856|gb|ACI61432.1| Dihydroorotate dehydrogenase [Streptococcus pyogenes NZ131] Length = 293 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGA-DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ D + L+L+ +P +F + + + PL +K Sbjct: 92 ETILKAIMASDYEDLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 151 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 152 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 209 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 210 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 262 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G + + + N Sbjct: 263 FERVTKELKTIMVEKGYQSLDDFRGN 288 >gi|320040516|gb|EFW22449.1| glutamate synthase [Coccidioides posadasii str. Silveira] Length = 2132 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1051 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVGIVASGVAKAKADH 1110 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1111 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQLRT 1165 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS-DAV 301 G D+ + +LGA G A+ P L+ + + + V Sbjct: 1166 GRDVAIACLLGAEEWGFATAPLIAMGCIMMRKCHLGTCPVGIATQDPALREKFEGTPEHV 1225 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L+R Sbjct: 1226 INFFYYVANELRAIMAKLGMRTINEMVGRAELLR 1259 >gi|307294904|ref|ZP_07574746.1| Glutamate synthase (ferredoxin) [Sphingobium chlorophenolicum L-1] gi|306879378|gb|EFN10596.1| Glutamate synthase (ferredoxin) [Sphingobium chlorophenolicum L-1] Length = 1512 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 108/359 (30%), Gaps = 68/359 (18%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK 87 +++ A+P DEV+ + E K+ P M+ G LAIA + Sbjct: 860 EFNFAREAVP---IDEVEATTEI-RKRFVTP----GMSLGALSPEAH--ETLAIAMNRIG 909 Query: 88 VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF--GVQKAHQAV---- 141 G D N K +E A + G ++ ++ ++ V Sbjct: 910 AKAVSGEGG---EDANRFKPYENGDNANSVIKQIASGRFGVHAEYLGSAEEIEIKVAQGA 966 Query: 142 -----------HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL--SSAMD--VPL 186 V H P +I P + + + L+ ++ + Sbjct: 967 KPGEGGQLPGFKVTEFIAKLRHATPGVTLISPPPHHDIYSIEDLAQLIYDCKMINPRARV 1026 Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K V K+ +AG GGT S S + G+ Sbjct: 1027 CVKLVSQAGIGTVAAGVAKAHADVILVAGHVGGTGASPQTSV-----KYAGTPWEMGLSE 1081 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + + + GGL+ G DI+ + ILGA G+ + L Sbjct: 1082 ANQVLTLNGLRHRVKLRTDGGLKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQCHSN 1141 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + + +E + LG + + E+ T L++ Sbjct: 1142 TCPVGVCVQDERLRQKFTGTPEKVINLMTFIAEEVREILARLGYRSLDEVIGRTELLKQ 1200 >gi|198453009|ref|XP_001359026.2| GA22001 [Drosophila pseudoobscura pseudoobscura] gi|198132175|gb|EAL28169.2| GA22001 [Drosophila pseudoobscura pseudoobscura] Length = 355 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 110/335 (32%), Gaps = 75/335 (22%) Query: 42 DEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQRVMFS 100 D+++ + +F G+ LS P+ I++ G +K E ++ + VG+ Sbjct: 32 DDINLNTQFFGRLLSNPIGIAA---GFDKNAEAVDGL-----KDLGFGFVEVGTVTPTAQ 83 Query: 101 DHN-----------------------------AIKSFELRQYAPHTVLISNLGAVQLNYD 131 + N S ++ + ++ NLG N Sbjct: 84 EGNPKPRVFRLSEDKAIINRYGFNSDGHEAVLQRLSESRKKENFNAIVGVNLG-RNRNTM 142 Query: 132 FGVQKAHQAVHVLG--ADGLFLHLNPL--QEIIQPNGNTNFADLSSKIALLSSAM----D 183 V Q V V G AD L ++++ + + +L ++ S + + Sbjct: 143 TPVADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNEARSRLESNRN 202 Query: 184 VPLLLK-----EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 VP+LLK E+ +D+ KS + +A RD D Sbjct: 203 VPILLKLSPDLEISDMSDIVDVIKRKKSRVDGLIVAN--------TTVSRDNLHDAKWTA 254 Query: 239 QDWGIP--------TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+ T + +M + + I GG+ +G D + GAS + + Sbjct: 255 EAGGLSGEPLRARSTEMIAQMYQLTNGKVPIIGVGGVSSGYDAYQKFEAGASYVQIYTAL 314 Query: 291 LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQ 325 + +E ++ E + G +Q Sbjct: 315 VYEGPY-------LVEQIKDELSKLITQRGHSNIQ 342 >gi|154494906|ref|ZP_02033911.1| hypothetical protein PARMER_03950 [Parabacteroides merdae ATCC 43184] gi|154085456|gb|EDN84501.1| hypothetical protein PARMER_03950 [Parabacteroides merdae ATCC 43184] Length = 325 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 31/293 (10%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGS 94 +D ++ G L PL++ S +G N N+ A + ++ M Sbjct: 2 IDIKTQYAGLTLRNPLIVGS-SGLTNNAER--NKEFEKAGAGAIVLKSLFEEQIEMQSDI 58 Query: 95 QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF-------------GVQKAHQA- 140 A +R Y + L +Q + A Sbjct: 59 LMQDSDYPEAAD--YIRGYVKANQINDYLELIQKTKELCTIPVIASINCYKSDAWIEFAR 116 Query: 141 -VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC-GLSSM 198 + + GAD L L++ L+ + N S I + + +P+++K G Sbjct: 117 QIELAGADALELNVFFLETDLTYNSENMRDLYVSIIRKVKETVSIPVMIKMSKMVGNIPA 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 +G + R I + + + ++ D T + Sbjct: 177 VAHTLTVNGADGIVLFNRFYQPDIDINNMQIVSGNVFSNHSDLS-DTLRWTAIVSGKIPG 235 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 +S G+ + D++K ++ GA + S + V+ IE + Sbjct: 236 ISIASSTGVHDWEDVIKCLLAGADAIQMCSAVYTHGAEIISQVLTCIEEWMHQ 288 >gi|45358059|ref|NP_987616.1| glutamate synthase subunit-related [Methanococcus maripaludis S2] gi|44920816|emb|CAF30052.1| Glutamate synthase subunit-related [Methanococcus maripaludis S2] Length = 494 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 118/355 (33%), Gaps = 77/355 (21%) Query: 36 LPEISFDEVDPSVEFLGKK-----LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM 90 P + +EV K + P+ I+ M+ G +I + AA KT AM Sbjct: 143 FPLNNDEEVITKTIIGPKAKHPLIIETPIFITHMSYGALSKNVKIALSKGSAAVKT--AM 200 Query: 91 AVG-----------SQRVMFS---DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 G + + + + +I L++ + I + +K Sbjct: 201 CSGEGGMLEESFENAYKYILEYVPNQYSITDENLKKVDAVEIKIGQSSKPGMGGHLPAEK 260 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD---LSSKIALLSSAMDV-PLLLKEVG 192 + + L Q+I+ P+ + + L +K++ L P+ +K + Sbjct: 261 VSEEIAKLR------GFKVGQDIVSPSKFHDINNKDDLKNKVSNLREKSGGKPIGIK-IA 313 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 G D+E+ + + I GR G + + + +D S +PT +L A Sbjct: 314 AGDIEADLEVATYAKPDFITIDGRPGATAASPKFIKDSTS----------VPTIFALYRA 363 Query: 253 RPYCN-----EAQFIASGGLRNGVDILKSI------------ILGASLGGLAS------- 288 R + N + + +GGLR D K+I L A+ Sbjct: 364 REFFNKNGITDISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQYRICDTGEC 423 Query: 289 --------PFLKPAMD---SSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTA 332 P LK + S+ + + +E L G K + +L ++ Sbjct: 424 PVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDLSVDDL 478 >gi|222530053|ref|YP_002573935.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor bescii DSM 6725] gi|222456900|gb|ACM61162.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor bescii DSM 6725] Length = 381 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 100/311 (32%), Gaps = 69/311 (22%) Query: 45 DPSVEFLGKKLSFPLLISS--MTGGNNK--------MIERINRNL-----AIAAEKTKVA 89 + S + L P++++S +TG + + ++L A + Sbjct: 3 NLSTTYAKLNLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEICRIAPTPRFK 62 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ISNLGAVQLNYDFGVQKAHQAVHV 143 + + F ++YA I + ++ D + + + Sbjct: 63 IVKHENTFTLYSYEQASEFNPQEYAEFIFKAKQKLSIPVIASINCYTDDAWLEYSKLMEQ 122 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS-MDIEL 202 GAD + L+L+ + +G ++ + L+ S + +P++ K + D Sbjct: 123 AGADAIELNLSCPHGVHIMSGMDVIEEMVNTTKLVKSNVKIPVIPKMTPQSTNPGSDALR 182 Query: 203 GLKSGIRY-----------FDI-----------AGRGGTSWSRIESHRDLESDIGIVFQD 240 +G DI AG GG W+ + R Sbjct: 183 LDSAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-PWAIMYGLR------------ 229 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 W A + ASGG NG D++K I+ GAS + + + ++ Sbjct: 230 W--------ISAVSPKVKCSISASGGAMNGEDVVKYILAGASAVQVCTTVI---LNGY-G 277 Query: 301 VVAAIESLRKE 311 V+ I +E Sbjct: 278 VIKKINKYLEE 288 >gi|260821394|ref|XP_002606018.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae] gi|229291355|gb|EEN62028.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae] Length = 1044 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 114/364 (31%), Gaps = 82/364 (22%) Query: 34 RALPE--ISFDEVDPSVEFLGKKLSFPLLISSMT--------------GGNNKMIERINR 77 ALP+ D+VD SVE G + P ++S G + + Sbjct: 524 PALPKFYTPIDQVDLSVEVCGIRFPNPFGLASAPPTTSAPMIRRAFEVGWGFALTKTFAL 583 Query: 78 NLAIAAE-------------KTKVAMAVGSQRVMFSDHNAIKS----FELRQYAPHTVLI 120 + I + S+ A EL++ P ++I Sbjct: 584 DKDIVTNVSPRIVKGTTSGYHYGPGQGSFLNIELISEKTAAYWCQTVTELKRDFPDKIVI 643 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFAD 170 +++ N D ++ A A G+D L L+L+ + + P N Sbjct: 644 ASI-MCSYNKDDWIELAQMA-EKAGSDALELNLSCPHGMGERGMGLACGQDPELVRNICR 701 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGI-RYFD----IAGRGGTSWSRIE 225 + SA+ +P K I K G+ ++G G Sbjct: 702 W------VRSAIKIPFFAKMTPNITDVTVIAQAAKEGMADGVTATNTVSGLMG----LKS 751 Query: 226 SHRDLESDIGIVFQDWGIPT-----PLSLEMARPYC---NEAQFIASGGLRNGVDILKSI 277 + R + + +G + P++L +A+GG+ + L+ + Sbjct: 752 NARAWPAVGQEMRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAEAGLQFL 811 Query: 278 ILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTAL 333 GAS+ + A+ + D V +E ++L + + +L + Sbjct: 812 HCGASVLQVC-----SAIQNQDFTV--VEDYITGLKAMLYL---QSLDDLADWDGQSPPT 861 Query: 334 IRHQ 337 RHQ Sbjct: 862 FRHQ 865 >gi|332673341|gb|AEE70158.1| GMP reductase [Helicobacter pylori 83] Length = 333 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 88/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 14 YEDIQLIPNKCIVNSRSECDTTVTLGKHAFKMPVV-------PANMQTIINDSIAEFLAE 66 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + G+ R+ F + I S + +LI L +L D+ Sbjct: 67 NGYFYIMHRFDGAARIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQKLASDY----- 121 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + +++ + P Sbjct: 122 ------ITIDIAHGHSNSVIEMIQ-----HIKTHLPETFVIAGNVGTP------------ 158 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 159 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCSKAAR 208 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 209 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 253 >gi|329666444|gb|AEB92392.1| inosine-5-monophosphate dehydrogenase [Lactobacillus johnsonii DPC 6026] Length = 382 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 49/278 (17%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +EV + +L PL+ + M + + Sbjct: 13 FDDVLLIPAESHVLP----NEVKLDTKLAPNLQLHIPLISAGM--------DTVTEGNMA 60 Query: 82 AAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLI--SNLGAVQLNYDFGVQ 135 A + V S + K + PH + L A Sbjct: 61 IAMAENGGLGVIHKNLSIEAQVEEVKKAKGKTVDPNLPHPAVDDQGRLLAAA-AVGVTSD 119 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCG 194 +A +L A + ++ + + A + KI + + L+ V G Sbjct: 120 TFERAESLLEAGADAIVIDTA--------HGHSAGVLRKIKEIREHFPNATLIAGNVATG 171 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 +G+ + G+ + + G+P ++ A Sbjct: 172 ---EGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQITAIYDAAS 216 Query: 255 YCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + IA GG++ D++K++ G + L S F Sbjct: 217 VAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 254 >gi|254491129|ref|ZP_05104310.1| hypothetical protein MDMS009_1461 [Methylophaga thiooxidans DMS010] gi|224463642|gb|EEF79910.1| hypothetical protein MDMS009_1461 [Methylophaga thiooxydans DMS010] Length = 1494 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + G+ Sbjct: 1009 VSVKLVSQAGVGTVAAGVAKAYADLITISGYDGGTGASPLTSV-----KYAGGPWELGLS 1063 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 A ++ + GGL+ G+D++K+ ILGA G P + Sbjct: 1064 EAHQTLRANDLRDKVRLQTDGGLKTGLDVIKAAILGAESFGFGTGPMVALGCKYLRICHL 1123 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + V+ + + +E + LG +Q+L T L+ Sbjct: 1124 NNCATGVATQNEKLRTQHFIGLPQMVMNYFQFVARETQEWLAALGVSSLQDLIGRTDLLE 1183 >gi|126668434|ref|ZP_01739391.1| inosine-5'-monophosphate dehydrogenase [Marinobacter sp. ELB17] gi|126627143|gb|EAZ97783.1| inosine-5'-monophosphate dehydrogenase [Marinobacter sp. ELB17] Length = 487 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 21/145 (14%) Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRGGTSWSRI 224 + + ++ + + ++ G ++ + +G + G G +RI Sbjct: 252 HSRGVLDRVRWIKEHYPELQVIG---GNIATAEAALALVDAGADAVKVGIGPGSICTTRI 308 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + + I S+ A ++ IA GGLR DI K+I GA Sbjct: 309 VAGVGVPQ----------ISAVSSVAEALK-NSDVPLIADGGLRFSGDIAKAIAAGAHCV 357 Query: 285 GLASPFLKPAMDSSDAVVAAIESLR 309 + + +D IE + Sbjct: 358 -----MIGSLLAGTDEAPGEIELFQ 377 >gi|260662580|ref|ZP_05863475.1| guanosine monophosphate reductase [Lactobacillus fermentum 28-3-CHN] gi|260553271|gb|EEX26214.1| guanosine monophosphate reductase [Lactobacillus fermentum 28-3-CHN] Length = 324 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 92/280 (32%), Gaps = 45/280 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI--AA 83 +DD LI S E DP V+F K P++ M IN LA+ A Sbjct: 6 YDDIQLIPNKCVIKSRKEADPQVKFGPKTFKIPVV-------PANMASVINEELAVWLAQ 58 Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISN-LGAVQLNYDFGVQKAHQAVH 142 M + F +++ + S +G YDF Q Sbjct: 59 NDYYYVM-------HRFNPADRAGF-VKRMHDRGLFASISVGIKDSEYDFINQLKD---E 107 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 L + + + + +G+++F + + I + + L G + + Sbjct: 108 QLVPEYITIDV--------AHGHSDF--VIAIIKHIKQQLPTTFLT--AGNVATPEAVRD 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L + + I Sbjct: 156 LENAGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRLCSKAARK-PLI 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R+ DI KS+ GAS+ + L +S ++ Sbjct: 205 ADGGIRHNGDIAKSVRFGASMV-MIGSLLAGHQESPGNLI 243 >gi|257884574|ref|ZP_05664227.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,501] gi|257887400|ref|ZP_05667053.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,141,733] gi|257820412|gb|EEV47560.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,231,501] gi|257823454|gb|EEV50386.1| dihydroorotate dehydrogenase [Enterococcus faecium 1,141,733] Length = 314 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 85/325 (26%), Gaps = 60/325 (18%) Query: 45 DPSVEFLGKKLSFPLLISS----MTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFS 100 F + P + +S MT + L A A S + Sbjct: 2 SLETTFANHTFANPFMNASGVHCMT----------TQELDELAHSEAGAFITKSCTINER 51 Query: 101 D--------------------HNAIKSFELRQY--APHTVLISNLGAVQLNYDFGVQKAH 138 N S+ L N VQ+ Sbjct: 52 KGNPEPRYFDVPLGSINSMGLPNLGFSYYLEYALAYEKAQKKPNQPLFFSIAGMSVQENL 111 Query: 139 QAVHVLGADGL----FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---V 191 + + + G L+L+ +P +F + + S PL +K Sbjct: 112 EMLGEIEKSGFKGITELNLSCPNVPGKPQLAYDFEATYETLKEVFSIFSKPLGIKLPPYF 171 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTPL 247 ++ + + Y + G + F G PT Sbjct: 172 DFAHFDQMADILNQFPLTYVNAINSVGNGLYIDTDKEAVVIKPKEGFGGIGGEYIKPTA- 230 Query: 248 SLEMARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 L R + E Q I +GG+R G D + ++ GAS+ + + K + + Sbjct: 231 -LANVRAFYTRLKPEIQIIGTGGIRTGQDAFEHLLCGASMLQIGTELHK---EGPE---- 282 Query: 304 AIESLRKEFIVSMFLLGTKRVQELY 328 + KE M G + E Sbjct: 283 IFSRIIKELTQIMSEKGYTSIDEFK 307 >gi|212551113|ref|YP_002309430.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549351|dbj|BAG84019.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 491 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 24/201 (11%) Query: 107 SFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 +++ A +L GV AH +GA + I+ + Sbjct: 200 TYKDITKAKDKPFACKDSKGRLCVAAGVGIAHDTYDRVGALVEAE----VDAIVIDTAHG 255 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRGGTSWSRIE 225 + + + + S +V +++ V + E +K+ + G G T +RI Sbjct: 256 HSKGTITILKEVKSKYNVDVVVGNVA---TMEAAEALVKAEADAIKVGIGPGSTCTTRI- 311 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASL 283 G+P ++ + IA GG+R DI+K++ G Sbjct: 312 ------------IAGVGVPQLSAIYDVAKVLKGTDVPVIADGGVRYSGDIVKALAAGGFS 359 Query: 284 GGLASPFLKPAMDSSDAVVAA 304 + L +S + Sbjct: 360 V-MMGSLLAGVEESPGETILY 379 >gi|149195257|ref|ZP_01872346.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus TB-2] gi|149134599|gb|EDM23086.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus TB-2] Length = 482 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 83/250 (33%), Gaps = 43/250 (17%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 PL I++ G + E+I + K+ + + IK + ++ P Sbjct: 154 KMPL-ITAKEGITLEEAEQILHK----NKIEKLPII--DKNGYLKGLITIKDIQKKKEYP 206 Query: 116 HT--VLISNLG-AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLS 172 + L A + G+++A V G D + + + + + + Sbjct: 207 NANKDKFGRLRVAAAIGVGNGIERAEALVKA-GVDVIVI----------DSAHGHSKGII 255 Query: 173 SKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLES 232 + + DV ++ V ++ +K+G + G+ + Sbjct: 256 DLVKAVKEKFDVEVVAGNVA---TAEATRDLIKAGADAVKVGIGPGSICTT--------- 303 Query: 233 DIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + G+P +++ + IA GG++ DI K+I +GAS Sbjct: 304 ---RIVAGVGVPQISAIDECAREAAKYDIPVIADGGIKYSGDIAKAIAVGASSV-----M 355 Query: 291 LKPAMDSSDA 300 + + ++ Sbjct: 356 IGSLLAGTEE 365 >gi|317009138|gb|ADU79718.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori India7] Length = 325 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 87/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHAFKMPVV-------PANMQTIINDSIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + G+ R+ F I S + +LI L +L D+ Sbjct: 59 NGYFYIMHRFDGAARIPFVKKMKKRQWISSISVGVKKEEYLLIEELAKQKLASDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + +++ + P Sbjct: 114 ------ITIDIAHGHSNSVIEMIQ-----HIKTHLPETFVIAGNVGTP------------ 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|229106042|ref|ZP_04236662.1| GMP reductase [Bacillus cereus Rock3-28] gi|228677377|gb|EEL31634.1| GMP reductase [Bacillus cereus Rock3-28] Length = 330 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 10 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 57 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 58 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEQLS 114 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 115 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEH 162 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 163 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 211 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 212 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 256 >gi|229099883|ref|ZP_04230806.1| GMP reductase [Bacillus cereus Rock3-29] gi|229118946|ref|ZP_04248291.1| GMP reductase [Bacillus cereus Rock1-3] gi|228664471|gb|EEL19967.1| GMP reductase [Bacillus cereus Rock1-3] gi|228683498|gb|EEL37453.1| GMP reductase [Bacillus cereus Rock3-29] Length = 328 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V K P++ M I+ +A Sbjct: 8 YEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVV-------PANMQTIIDERIA----- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 T +A + SF +R ++ S V+ + VQ+ A L Sbjct: 56 TYLAENNYFYIMHRFQPEKRISF-IRDMQSRGLIASISVGVKEDEYEFVQQL--AAEQLS 112 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + + I + + ++ G + + Sbjct: 113 PEYITIDI--------AHGHSNA--VINMIQHIKKHLPESFVI--AGNVGTPEAVRELEH 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 210 GIRTHGDVAKSIRFGATMVMVGSLFAGHEESPGETIEKDGKLYKE 254 >gi|227511659|ref|ZP_03941708.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus buchneri ATCC 11577] gi|227085153|gb|EEI20465.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus buchneri ATCC 11577] Length = 323 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S + D S++F K P++ M IN +LAI AE Sbjct: 6 YEDIQLIPNKCIIKSRSDADTSIKFGPKTFKIPVV-------PANMETVINDDLAIWLAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + F +A ++G Y F + A Sbjct: 59 NGYF------YIMHRFQPEKREGFIEMMHAKDLYASISVGIKDDEYKFIDELAEHNNK-- 110 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + +G+++F + I + + L+ G + + Sbjct: 111 -PEYITIDV--------AHGHSDF--VIKMIHYIKEKLPDSFLI--AGNLGTPEAVREIE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G I G + + G W + +L + + IA Sbjct: 158 NAGADATKIGIGPGKACIT-------KLKTGFGTGGWQL---AALRLCSKAARK-PMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + L +S V++ Sbjct: 207 GGIRFNGDIAKSVRFGASMV-MIGSLLAGHEESPGNVIS 244 >gi|164658794|ref|XP_001730522.1| hypothetical protein MGL_2318 [Malassezia globosa CBS 7966] gi|159104418|gb|EDP43308.1| hypothetical protein MGL_2318 [Malassezia globosa CBS 7966] Length = 551 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 14/120 (11%) Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G ++ +++G + G+ E G P ++ Sbjct: 310 GNVVTREQAATLIEAGADALRVGMGSGSICITQEVM------------AVGRPQGTAVRQ 357 Query: 252 ARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 Y IA GG++N I K++ LGAS + + + L+ Sbjct: 358 VAEYAKRFGVPVIADGGIQNVGHIAKALCLGASAVMMGGLLAGTTESPGEYFYREGQRLK 417 >gi|84683917|ref|ZP_01011819.1| glutamate synthase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84667670|gb|EAQ14138.1| glutamate synthase family protein [Rhodobacterales bacterium HTCC2654] Length = 501 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 12/139 (8%) Query: 163 NGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD------IELGLKSGIRYFDI-AG 215 ++ DL I+ + P+ K V + + G S + I G Sbjct: 275 EEIDDWDDLLDVISHIREVTGKPVGFKTVVGAVDPFSDLFDCIMRRGPDSAPDFITIDGG 334 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 GGT + + + I P + L R + + IASG + N D+ Sbjct: 335 EGGTGAAPMPLIDLVGMPIREAL-----PRIVDLRDQRGLHDRIRMIASGKMVNPSDVAW 389 Query: 276 SIILGASLGGLASPFLKPA 294 +I GA A F+ Sbjct: 390 AICAGADFVVSARGFMFSL 408 >gi|50086461|ref|YP_047971.1| IMP dehydrogenase [Acinetobacter sp. ADP1] gi|49532437|emb|CAG70149.1| IMP dehydrogenase [Acinetobacter sp. ADP1] Length = 488 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 44/156 (28%) Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI---------------- 236 + +E +++G + G S IE R ++ + Sbjct: 226 GAETPARVEALVEAGADVIVVDTAHGHSAGVIERVRWVKQNYPQVQVIGGNIATGDAALA 285 Query: 237 ----------------------VFQDWGIPTPLSLEM-ARPYCNEAQFIASGGLRNGVDI 273 + G+P +++ AR E IA GG+R D+ Sbjct: 286 LLDAGADAVKVGIGPGSICTTRIVAGIGVPQISAIDNVARALKGEIPLIADGGIRFSGDM 345 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLR 309 K+I GAS + M ++ +E + Sbjct: 346 AKAIAAGASTI-----MVGSLMAGTEEAPGEVEFFQ 376 >gi|314938645|ref|ZP_07845925.1| dihydroorotate oxidase [Enterococcus faecium TX0133a04] gi|314944089|ref|ZP_07850752.1| dihydroorotate oxidase [Enterococcus faecium TX0133C] gi|314950327|ref|ZP_07853608.1| dihydroorotate oxidase [Enterococcus faecium TX0082] gi|314951099|ref|ZP_07854161.1| dihydroorotate oxidase [Enterococcus faecium TX0133A] gi|314992315|ref|ZP_07857749.1| dihydroorotate oxidase [Enterococcus faecium TX0133B] gi|313593131|gb|EFR71976.1| dihydroorotate oxidase [Enterococcus faecium TX0133B] gi|313596733|gb|EFR75578.1| dihydroorotate oxidase [Enterococcus faecium TX0133A] gi|313597316|gb|EFR76161.1| dihydroorotate oxidase [Enterococcus faecium TX0133C] gi|313642033|gb|EFS06613.1| dihydroorotate oxidase [Enterococcus faecium TX0133a04] gi|313643344|gb|EFS07924.1| dihydroorotate oxidase [Enterococcus faecium TX0082] Length = 290 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 30/247 (12%) Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL----FLHLNPLQE 158 ++E Q + L ++ VQ+ + + + G L+L+ Sbjct: 58 EYALAYEKVQENQNQPLFFSI------AGMSVQENLEMLEKIEKSGFNGITELNLSCPNV 111 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGLSSMDIELGLKSGIRYFDIAG 215 +P +F + + S PL +K ++ + + Y + Sbjct: 112 PGKPQLAYDFEATYETLKEVFSIFSKPLGIKLPPYFDFAHFDQMADILNQFPLTYVNAIN 171 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWG----IPTPLSLEMARPY----CNEAQFIASGGL 267 G + F G PT L R + E Q I +GG+ Sbjct: 172 SVGNGLYIDTEQEAVVIKPKEGFGGIGGEYIKPTA--LANVRAFYTRLKPEIQIIGTGGI 229 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 R G D + ++ GAS+ + + K + + + KE M G + E Sbjct: 230 RTGQDAFEHLLCGASMLQIGTELHK---EGPE----IFSRIIKELTQIMSEKGYTSIDEF 282 Query: 328 YLNTALI 334 I Sbjct: 283 KGKLRTI 289 >gi|257887610|ref|ZP_05667263.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,141,733] gi|257823664|gb|EEV50596.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,141,733] Length = 325 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F + LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEAARIPF--IKKMKKRGLITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDMIQHIKKYLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|256957769|ref|ZP_05561940.1| dihydroorotate dehydrogenase A [Enterococcus faecalis DS5] gi|257080015|ref|ZP_05574376.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294779867|ref|ZP_06745251.1| dihydroorotate oxidase [Enterococcus faecalis PC1.1] gi|256948265|gb|EEU64897.1| dihydroorotate dehydrogenase A [Enterococcus faecalis DS5] gi|256988045|gb|EEU75347.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294453048|gb|EFG21466.1| dihydroorotate oxidase [Enterococcus faecalis PC1.1] Length = 311 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 2 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 59 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 60 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 116 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 117 ESEYTGVTEFNLSCPNLPSKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 177 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 236 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + L KE Sbjct: 237 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFARLAKEL 289 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 290 QEIMAAKGYESIEEFR 305 >gi|254465925|ref|ZP_05079336.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium Y4I] gi|206686833|gb|EDZ47315.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium Y4I] Length = 482 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALL-SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + + + + +V ++ V ++ + +G + G+ + Sbjct: 250 HSAGVIDAVTRIKAQYSNVQVIAGNVA---TAEATRALIDAGADAVKVGIGPGSICTT-- 304 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ + IA GG++ D K+I GAS Sbjct: 305 ----------RMVAGVGVPQLTAIMDCAGAAGDVPVIADGGIKFSGDFAKAIAAGAS-CA 353 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 354 MVGSMIAGTDESPGEVILY 372 >gi|42518129|ref|NP_964059.1| inosine-5-monophosphate dehydrogenase [Lactobacillus johnsonii NCC 533] gi|41582413|gb|AAS08025.1| inosine-5-monophosphate dehydrogenase [Lactobacillus johnsonii NCC 533] Length = 384 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 90/288 (31%), Gaps = 45/288 (15%) Query: 14 CKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNN 69 + + FDD LI LP +EV + +L PL+ + M Sbjct: 3 LWETKFAKKGLTFDDVLLIPAESHVLP----NEVKLDTKLAPNLQLHIPLISAGM----- 53 Query: 70 KMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA--IKSFELRQYAPHTVLI--SNLGA 125 + N +A AE + + + + K + PH + L A Sbjct: 54 DTVTEGNMAIA-MAENGGLGVIHKNLSIEVQVEEVKKAKGKTVDPNLPHPAVDDQGRLLA 112 Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DV 184 +A +L A + ++ + + A + KI + + Sbjct: 113 AA-AVGVTSDTFERAESLLEAGADAIVIDTA--------HGHSAGVLRKIKEIREHFPNA 163 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 L+ V G +G+ + G+ + + G+P Sbjct: 164 TLIAGNVATG---EGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVP 208 Query: 245 TPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 ++ A + + IA GG++ D++K++ G + L S F Sbjct: 209 QITAIYDAASVAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 256 >gi|312891857|ref|ZP_07751362.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis DSM 18603] gi|311295648|gb|EFQ72812.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis DSM 18603] Length = 489 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 19/139 (13%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + K+ + + D+ +++ V G + +G + G+ + Sbjct: 256 HSKGVIDKLKEVKAKYPDLQVIVGNVATG---EGAKALADAGADAVKVGIGPGSICTT-- 310 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASL 283 + G+P ++ IA GG+++ DI K+I GAS Sbjct: 311 ----------RIIAGVGVPQLYAVYECAKALRGTGVPVIADGGIKHTGDIAKAIAAGASS 360 Query: 284 GGLASPFLKPAMDSSDAVV 302 +A +S + Sbjct: 361 I-MAGSLFAGVEESPGETI 378 >gi|229917550|ref|YP_002886196.1| guanosine 5'-monophosphate oxidoreductase [Exiguobacterium sp. AT1b] gi|259647694|sp|C4L088|GUAC_EXISA RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|229468979|gb|ACQ70751.1| guanosine monophosphate reductase [Exiguobacterium sp. AT1b] Length = 327 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 91/290 (31%), Gaps = 48/290 (16%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + + S E DP+VE G P++ M I+ +A+ Sbjct: 7 YEDIQLIPAKCIVD-SRSECDPTVELGGFTFRLPVV-------PANMQTIIDEKVALMLA 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV--- 141 K + + +F Q L +++ + ++G + ++ Sbjct: 59 KNG-----YFYIMHRFNPETRLAF--IQDMHERGLYASISVGVKDEEYGFIEVLKSTGHT 111 Query: 142 -HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI 200 + D H N + +IQ + + ++ G + + Sbjct: 112 PEFITIDIAHGHSNAVIRMIQ---------------HIKHHLPGSFVI--AGNVGTPEAV 154 Query: 201 ELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 +G + G + G W + +L + Sbjct: 155 RELEHAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAATK-P 203 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 IA GG+R DI KSI GAS+ + S F + + L++ Sbjct: 204 IIADGGIRTHGDIAKSIRFGASMVMIGSLFAGHDESPGETFEQDGKQLKE 253 >gi|119357429|ref|YP_912073.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides DSM 266] gi|119354778|gb|ABL65649.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides DSM 266] Length = 497 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 39/151 (25%), Gaps = 57/151 (37%) Query: 242 GIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA------------ 287 G+P ++ + IA GG++ DI K++ GA + Sbjct: 320 GMPQFTAILNCAEEAAKTDTPIIADGGIKYSGDIAKALAAGADTVMMGSIFAGTDESPGE 379 Query: 288 -----------------------------SPFLKPAMDSSDAVVAAIE------------ 306 F + +S V IE Sbjct: 380 TILLEGRKFKTYRGMGSLGAMSEPEGSSDRYFQDASSESKKYVPEGIEGRIPSKGNLDEV 439 Query: 307 --SLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L +M G ++EL NT +R Sbjct: 440 VYQLIGGLKSAMGYCGVNNIEELKKNTRFVR 470 >gi|296115079|ref|ZP_06833721.1| putative glutamate synthase [NADPH] large chain precursor [Gluconacetobacter hansenii ATCC 23769] gi|295978416|gb|EFG85152.1| putative glutamate synthase [NADPH] large chain precursor [Gluconacetobacter hansenii ATCC 23769] Length = 1512 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + +S + + G+ Sbjct: 1031 VTVKLVARSGIGTIAAGVAKAKADAILISGHSGGTGASPQSSV----KYAGMPWELGLAE 1086 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------------- 291 + M + + GGL+ G D++ + +LGA G+ + L Sbjct: 1087 AHQVLMLNRLRHRVKLRTDGGLKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1146 Query: 292 --------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 K + + V+ + ++ + LG + E+ T L+ Sbjct: 1147 TCPVGVCTQDDDLRKKFEGTPEKVINLFSFIAEDVRNILASLGFATLNEVIGRTDLLHQ 1205 >gi|260577303|ref|ZP_05845276.1| Glutamate synthase (ferredoxin) [Rhodobacter sp. SW2] gi|259020484|gb|EEW23807.1| Glutamate synthase (ferredoxin) [Rhodobacter sp. SW2] Length = 1512 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VTVKLVAASGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + GGLR G DI+ + ++GA G+ + Sbjct: 1083 AHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 289 ----------PFLKP-AMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ S+D VV I +E + +G + + E+ Sbjct: 1143 TCPVGVCTQDPALRAKFAGSADKVVNLITFYAQEVREILASIGARSMDEI 1192 >gi|238916477|ref|YP_002929994.1| dihydroorotate oxidase [Eubacterium eligens ATCC 27750] gi|238871837|gb|ACR71547.1| dihydroorotate oxidase [Eubacterium eligens ATCC 27750] Length = 303 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 63/324 (19%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER---INRNLA----------------- 80 +++ SV G +L P+ ++S T G+ +NR A Sbjct: 1 MSDINMSVNIAGVELKNPVTVASGTFGSGMEYGEYVDLNRLGAVTTKGVANIPWPGNPTP 60 Query: 81 IAAEKTKVAM-AVGSQRVMFSDHNAIKSFELRQYAP-----HTVLISNL--GAVQLNYDF 132 AE M A+G Q +F +++ P T +I N+ + D Sbjct: 61 RIAETYGGMMNAIGLQNPGL------DTF-VKRDIPFLKQYDTKIIVNVCGKSEADYVDA 113 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD----VPLLL 188 + Q V +L + ++ G F + S ++ A+ P+++ Sbjct: 114 VEKLGEQPVDLLEINISCPNVK--------EGGIAFGQVPSSAEAITKAVKKVAKQPVIM 165 Query: 189 KEVGCGLSSMDIELGLKSG-IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT-- 245 K ++ +++G + + +I+ +R + G P Sbjct: 166 KLSPNVTDITEMAKAVEAGGADAVSLINT--LTGMKIDVNRRTFAVANKTAGVSG-PAIH 222 Query: 246 PLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 P+++ M N I GG+R D L+ I++GAS + + + + Sbjct: 223 PIAVRMVYQVANAINLPIIGMGGIRTAEDALEMIMVGASAVAVGT----ANFNDPYTTIK 278 Query: 304 AIESLRKEFIVSMFLLGTKRVQEL 327 I+ +R+ + ++EL Sbjct: 279 VIDGIREYMEKN----NVADIKEL 298 >gi|78486296|ref|YP_392221.1| glutamate synthase subunit alpha [Thiomicrospira crunogena XCL-2] gi|78364582|gb|ABB42547.1| glutamate synthase (NADPH) large subunit [Thiomicrospira crunogena XCL-2] Length = 1493 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + + + + Sbjct: 1004 VSVKLVAEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSVKYAGNPFEMGLAE---- 1059 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A + A GGL+ G+D++K+ ILGA G +P + Sbjct: 1060 -AHQVLRANDLRGQVILQADGGLKTGLDVVKAAILGAESFGFGTAPMVALGCKYLRICHL 1118 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + + V+ + +E + LG R+++L Sbjct: 1119 NTCAVGVATQDERLRKEHFIGMPEMVINYFRFVAEETREWLAKLGVARLEDL 1170 >gi|255590483|ref|XP_002535284.1| dihydroorotate dehydrogenase, putative [Ricinus communis] gi|223523566|gb|EEF27098.1| dihydroorotate dehydrogenase, putative [Ricinus communis] Length = 309 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 90/286 (31%), Gaps = 61/286 (21%) Query: 47 SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMA-VGSQRVMFSDHNAI 105 S E LG + P+ +++ G +K N L A +G+ ++ Sbjct: 57 STEVLGLRFPGPVGLAA---GFDK-----NGELYRYLPSAGFGFAEIGTVTLL---PEPG 105 Query: 106 KSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL--------------GADGLFL 151 +S + A + + L + +A + + L L Sbjct: 106 RSLGIHAVANSLARHARGHHIPLGLSISMNRATRPQAMAQDYLACLRAAWQHADYVVLNL 165 Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALLSSAM------DVPLLLK-EVGCGLSSMDIELGL 204 + ++ QP AD+ + + +P ++K + G + +++ L Sbjct: 166 GVRAGPDLHQPEHRNVLADVLEAVRTEKEVLFRQFGYRLPTMIKLDQARGGTQQLMDMAL 225 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 K+GI + G G PT L +M + +A Sbjct: 226 KAGIEGVVLCGAGSR------------------------PTTLLEQMVKTLAGRIPIVAV 261 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R D + GASL + M S +++ + + Sbjct: 262 GGIRTPQDAADRLAAGASLVQV----HTGLMQSGPKLISQMNAFLA 303 >gi|312135772|ref|YP_004003110.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor owensensis OL] gi|311775823|gb|ADQ05310.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor owensensis OL] Length = 381 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 101/311 (32%), Gaps = 69/311 (22%) Query: 45 DPSVEFLGKKLSFPLLISS--MTGGNNK--------MIERINRNL-----AIAAEKTKVA 89 + S + L P++++S +TG + + ++L A + Sbjct: 3 NLSTTYAKLNLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEVCRIAPTPRFK 62 Query: 90 MAVGSQRVMFSDHNAIKSFELRQYAPHTVL------ISNLGAVQLNYDFGVQKAHQAVHV 143 + + F+ ++YA I + ++ D + + + Sbjct: 63 IVKHENTFTLYSYEQASEFDPQEYAEFIFKAKQKLSIPVIASINCYTDDAWIEYSKLMEQ 122 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS-MDIEL 202 GAD + L+L+ + +G ++ L+ S + +P++ K + D Sbjct: 123 AGADAIELNLSCPHGVHIMSGMDVIEEMVHTTKLVKSNVKIPVIPKMTPQSTNPGSDALR 182 Query: 203 GLKSGIRY-----------FDI-----------AGRGGTSWSRIESHRDLESDIGIVFQD 240 ++G DI AG GG W+ + R Sbjct: 183 LDQAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-PWAIMYGLR------------ 229 Query: 241 WGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 W A + ASGG NG D++K I+ GAS + + + ++ Sbjct: 230 W--------ISAVAPKVKCSISASGGAMNGEDVVKYILAGASAVQVCTTVI---LNGY-G 277 Query: 301 VVAAIESLRKE 311 V+ I +E Sbjct: 278 VINKINKYLEE 288 >gi|227432366|ref|ZP_03914358.1| inosine-5'-monophosphate dehydrogenase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351887|gb|EEJ42121.1| inosine-5'-monophosphate dehydrogenase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 393 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 86/273 (31%), Gaps = 37/273 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 F+D L+ ++ + V + KL+ PLL ++M + R LA Sbjct: 30 FEDVKLVDDLQSTVTPESVSVTTSLTPTLKLNIPLLSAAM---DTVTEARFATALAKL-- 84 Query: 85 KTKVAM----AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + S + +F+ + V V + Sbjct: 85 -GGLGVIHKNMTISAQADEVRKVKTATFDSADFPNAAVDAEGHLLVAGAVGVTNDTVDRV 143 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMD 199 ++ A + L+ + + + K++ + S ++ ++ G + Sbjct: 144 QAMVEAGADAIVLDSA--------HGHSEGVLRKVSEVRSTFPNLNIIA---GNIATREG 192 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCN 257 +G I G+ + V G+P ++ A Sbjct: 193 AAALYDAGADVVKIGIGPGSICTT------------RVVAGIGVPQVSAIRDAALEAAAR 240 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + IA GG++ +DI+K+I G + L S F Sbjct: 241 GKKIIADGGVKTSLDIVKAISAGGNAVMLGSMF 273 >gi|5578893|emb|CAB51330.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae] Length = 311 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG---LSSMDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVYFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDRITNELKAIMVEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|229022057|ref|ZP_04178612.1| Glutamate synthase, large subunit [Bacillus cereus AH1272] gi|228739260|gb|EEL89701.1| Glutamate synthase, large subunit [Bacillus cereus AH1272] Length = 783 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 29/250 (11%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------VAMAVGSQRVMFSDHNAI 105 P +ISSM+ G+ I R A AA++ + +G A Sbjct: 144 DLPFIISSMSFGSQNEIAF--RAYAEAADQLNMISLNGEGGEIKDMIGKYPNTRGQQVAS 201 Query: 106 KSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPLQEIIQP 162 F + ++ +G + G + + + A + ++I P Sbjct: 202 GRFGVNAELLNSSNLIEIKIGQGAKPGEGGHLPGSKVTAKIAEARNATI----GSDLISP 257 Query: 163 NGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGR-G 217 + N + DL+ I + +A + + +V + I + K+G + +I+G G Sbjct: 258 SNNHDIYSIEDLAQMITEIKTANHLAKVAVKVPVVPNIGTIAVGIAKAGADFINISGFDG 317 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSI 277 GT +RI + + + + + G+ + + ++ + A GG+R+ D LK + Sbjct: 318 GTGAARIHALQHVGLPV-----EIGVKAAHNALLEAHMRHKVEIWADGGIRSVNDALKIM 372 Query: 278 ILGASLGGLA 287 +LGA+ G Sbjct: 373 LLGANRIGFG 382 >gi|254412466|ref|ZP_05026240.1| IMP dehydrogenase family protein [Microcoleus chthonoplastes PCC 7420] gi|196180776|gb|EDX75766.1| IMP dehydrogenase family protein [Microcoleus chthonoplastes PCC 7420] Length = 387 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 58/202 (28%), Gaps = 56/202 (27%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG------GTSWSRIESH 227 +A M +P++L G ++ +K+G + G G G + Sbjct: 179 LAQFCQDMPMPVVL---GNCVTYEVALNLMKAGAAAVLVGIGPGAACTSRGVLGVGVPQA 235 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 +D D+ T N IA GGL G DI K I GA + Sbjct: 236 -TAVADCAAARDDYHQET----------GNYVPVIADGGLITGGDICKCIACGADAVMIG 284 Query: 288 SPF-----------------------------------LKPAMDSSDAVVAAIESLRKEF 312 SP L+ + + +L Sbjct: 285 SPLARAKEAPGGGFHWGMATPSPVLPRGTRIQVGSTGTLQEILIGPAQLDDGTHNLLGAL 344 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 345 KTSMGTLGAKNLKEMQQVEVVI 366 >gi|110834285|ref|YP_693144.1| glutamate synthase large subunit [Alcanivorax borkumensis SK2] gi|110647396|emb|CAL16872.1| glutamate synthase, large subunit, putative [Alcanivorax borkumensis SK2] Length = 524 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 16/220 (7%) Query: 86 TKVAMAVGSQRVMFSDHNA-IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 V VG+ R D + + L A + + G A V Sbjct: 196 CDVVFQVGTARYGVRDADGKLDDERLAAIAARQQVKMIEIKLSQGAKPGKGGILPADKVT 255 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFA---DLSSKIALLSSAMDVPLLLKEVGCGLSS-MDI 200 + Q I PNG DL IA + P +K V S D+ Sbjct: 256 QEIAAIRGIPAGQASISPNGQPGVNSADDLLDLIAHVRKVSGKPTGIKCVLGAWSWVEDL 315 Query: 201 ELGL-----KSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 L + +S + I +G GGT + + L D+G+ + +P + L Sbjct: 316 FLAIHERGMESAPDFITIDSGDGGTGAAPM----SLMDDVGLYLAE-SLPLLVDLRDGYG 370 Query: 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + IASG L + +I +GA A ++ Sbjct: 371 LTDRIRIIASGKLITPSMVAWAIAVGADFCVSARGYMFAL 410 >gi|300812148|ref|ZP_07092593.1| GMP reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496876|gb|EFK31953.1| GMP reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 330 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 99/347 (28%), Gaps = 76/347 (21%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E D SV+F + P++ M I+ LA+ Sbjct: 12 YDDIQLVPNKAIVKSRKECDTSVKFGNRTFKIPVV-------PANMESVIDEKLAVW--- 61 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + F + L +++ ++ + V Sbjct: 62 --LAQNGYYYVMHRFQPEKRADF--IKMMHEKGLFASISVGIKGDEYDF--IDELVEK-D 114 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + ++ + + + I + M L G + + Sbjct: 115 LIPEYTTIDVA--------HGHSVYVIDMIKYIKEKMPDTFLT--AGNVATPEAVRELEN 164 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + + G W + +L M + I G Sbjct: 165 AGADATKVGVGPGKACIT-------KLKTGFGTGGWQL---AALRMCSKVARK-PLITDG 213 Query: 266 GLRNGVDILKSIILGASLG----------------------------GLASPFLKPAMDS 297 G+R+ DI KS+ GAS+ G AS K A + Sbjct: 214 GIRHNGDIAKSVRFGASMVMIGSMLAGHEESPGNVIKIDGKTYKQYWGSASEVQKGAYRN 273 Query: 298 SDA----------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + +E ++++ S+ G + ++ + +I Sbjct: 274 VEGKQMLVPYRGSIADTLEEMKEDLQSSISYAGGRDLESIKRVDYVI 320 >gi|227508677|ref|ZP_03938726.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191845|gb|EEI71912.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 323 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 41/279 (14%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S + D S++F K P++ M IN +LAI AE Sbjct: 6 YEDIQLIPNKCIIKSRSDADTSIKFGPKTFKIPVV-------PANMETVINDDLAIWLAE 58 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 + + F +A ++G Y F + A Sbjct: 59 NGYF------YIMHRFQPEKREGFIEMMHAKDLYASISVGIKDDEYKFIDELAEHNNK-- 110 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + +G+++F + I + + L+ G + + Sbjct: 111 -PEYITIDV--------AHGHSDF--VIKMIHYIKEKLPDSFLI--AGNLGTPEAVREIE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G I G + + G W + +L + + IA Sbjct: 158 NAGADATKIGIGPGKACIT-------KLKTGFGTGGWQL---AALRLCSKAARK-PMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GAS+ + L +S V++ Sbjct: 207 GGIRFNGDIAKSVRFGASMV-MIGSLLAGHEESPGNVIS 244 >gi|149003383|ref|ZP_01828272.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP14-BS69] gi|147758566|gb|EDK65564.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP14-BS69] Length = 311 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDRITNELKAIMVEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|45658529|ref|YP_002615.1| glutamate synthase (NADPH) subunit alpha precursor [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601772|gb|AAS71252.1| glutamate synthase (NADPH) alpha chain precursor [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 1498 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + I S + S + Sbjct: 1029 KAQVSVKLVSEAGVGTIAAGVAKANADVILISGHVGGTGAAPITSIKYAGSP-----WEL 1083 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + + + GG+ +G D++ + LGA G+ + L Sbjct: 1084 GLSETHQVLVMNGLRDRVVLRTDGGIVSGRDVIIAACLGAEEYGVGTASLVALGCIMARK 1143 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S D +V L E + LG + + E+ T L Sbjct: 1144 CHLNNCPTGIATQDIKFRAKYKGSPDQLVNLFTCLALEVREYLAELGFRSIDEIIGRTDL 1203 Query: 334 IRH 336 ++ Sbjct: 1204 LKQ 1206 >gi|24213656|ref|NP_711137.1| glutamate synthase subunit alpha [Leptospira interrogans serovar Lai str. 56601] gi|24194460|gb|AAN48155.1| glutamate synthase (NADPH) alpha chain precursor [Leptospira interrogans serovar Lai str. 56601] Length = 1498 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + I S + S + Sbjct: 1029 KAQVSVKLVSEAGVGTIAAGVAKANADVILISGHVGGTGAAPITSIKYAGSP-----WEL 1083 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + + + GG+ +G D++ + LGA G+ + L Sbjct: 1084 GLSETHQVLVMNGLRDRVVLRTDGGIVSGRDVIIAACLGAEEYGVGTASLVALGCIMARK 1143 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S D +V L E + LG + + E+ T L Sbjct: 1144 CHLNNCPTGIATQDIKFRAKYKGSPDQLVNLFTCLALEVREYLAELGFRSIDEIIGRTDL 1203 Query: 334 IRH 336 ++ Sbjct: 1204 LKQ 1206 >gi|56964980|ref|YP_176711.1| guanosine 5'-monophosphate oxidoreductase [Bacillus clausii KSM-K16] gi|57012763|sp|Q5WD10|GUAC_BACSK RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|56911223|dbj|BAD65750.1| GMP reductase [Bacillus clausii KSM-K16] Length = 328 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 26 FDDWHLIH-RALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 ++D LI + + S E D SVE G+ P++ M I+ N+A Sbjct: 8 YEDIQLIPAKCIVG-SRAECDTSVELGGRTFKLPVV-------PANMQTIIDENIAR--- 56 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +A + +F ++ L +++ ++ Q Sbjct: 57 --YLAENDYFYIMHRFQPETRLAF-VKDMHERG-LYASISVGVKEEEYTF--VQQLADQ- 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 H+ P E + + ++ + + I + + + ++ G + + Sbjct: 110 -------HVVP--EYVTIDIAHGHSEAVINMIRHIKTHLPDSFVI--AGNVGTPEAVREL 158 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 159 EHAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 207 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 GG+R DI KS+ GA++ + S F D + + ++ Sbjct: 208 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGDTIEKDGKLYKE 254 >gi|83944496|ref|ZP_00956949.1| inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp. EE-36] gi|83844698|gb|EAP82582.1| inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp. EE-36] Length = 482 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 69/232 (29%), Gaps = 26/232 (11%) Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E I+ A EK V A G + + + ++ + + A D Sbjct: 167 EAISLMKARRIEKLLVTDATGKLTGLLTLKDTEQAVLNPTACKDNLGRLRVAAATTVGDA 226 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 G +++ V G D + + DL + DV ++ V Sbjct: 227 GYERSQALVEA-GVDMIVIDTAHGHSAGVAEAVRRARDL---------SSDVQIVAGNVA 276 Query: 193 CGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA 252 G + +G + G+ + + G+P ++ Sbjct: 277 TG---DATRALIDAGADAVKVGIGPGSICTT------------RMVAGVGVPQLTAIMDC 321 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA GG++ D K+I GAS + + +S V+ Sbjct: 322 AKAAGDVPIIADGGIKFSGDFAKAIAAGAS-CAMVGSMIAGTDESPGEVILY 372 >gi|15900658|ref|NP_345262.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae TIGR4] gi|111658346|ref|ZP_01409034.1| hypothetical protein SpneT_02000486 [Streptococcus pneumoniae TIGR4] gi|116516687|ref|YP_816159.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae D39] gi|148985887|ref|ZP_01818981.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP3-BS71] gi|148989845|ref|ZP_01821139.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP6-BS73] gi|148992427|ref|ZP_01822122.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP9-BS68] gi|148997160|ref|ZP_01824814.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP11-BS70] gi|149007644|ref|ZP_01831261.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP18-BS74] gi|149010610|ref|ZP_01831981.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP19-BS75] gi|168484831|ref|ZP_02709776.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC1873-00] gi|168486743|ref|ZP_02711251.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC1087-00] gi|168488433|ref|ZP_02712632.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae SP195] gi|168490851|ref|ZP_02714994.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC0288-04] gi|168492913|ref|ZP_02717056.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC3059-06] gi|168575423|ref|ZP_02721359.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae MLV-016] gi|169832400|ref|YP_001694224.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae Hungary19A-6] gi|182683683|ref|YP_001835430.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae CGSP14] gi|194397157|ref|YP_002037410.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae G54] gi|221231558|ref|YP_002510710.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae ATCC 700669] gi|225854271|ref|YP_002735783.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae JJA] gi|225856438|ref|YP_002737949.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae P1031] gi|225858572|ref|YP_002740082.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae 70585] gi|225860737|ref|YP_002742246.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae Taiwan19F-14] gi|237650465|ref|ZP_04524717.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae CCRI 1974] gi|237821905|ref|ZP_04597750.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae CCRI 1974M2] gi|298229127|ref|ZP_06962808.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255808|ref|ZP_06979394.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502548|ref|YP_003724488.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae TCH8431/19A] gi|303255823|ref|ZP_07341864.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae BS455] gi|303260229|ref|ZP_07346200.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP-BS293] gi|303261435|ref|ZP_07347383.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP14-BS292] gi|303264102|ref|ZP_07350023.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS397] gi|303266287|ref|ZP_07352178.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS457] gi|303268726|ref|ZP_07354516.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS458] gi|307067366|ref|YP_003876332.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae AP200] gi|307127687|ref|YP_003879718.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae 670-6B] gi|18285267|sp|Q9X9S0|PYRD_STRPN RecName: Full=Dihydroorotate dehydrogenase; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gi|14972239|gb|AAK74902.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae TIGR4] gi|116077263|gb|ABJ54983.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae D39] gi|147756860|gb|EDK63900.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP11-BS70] gi|147760799|gb|EDK67770.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP18-BS74] gi|147765091|gb|EDK72020.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP19-BS75] gi|147922033|gb|EDK73157.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae SP3-BS71] gi|147924787|gb|EDK75871.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP6-BS73] gi|147928744|gb|EDK79757.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP9-BS68] gi|168994902|gb|ACA35514.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae Hungary19A-6] gi|172041986|gb|EDT50032.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC1873-00] gi|182629017|gb|ACB89965.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae CGSP14] gi|183570267|gb|EDT90795.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC1087-00] gi|183573192|gb|EDT93720.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae SP195] gi|183574599|gb|EDT95127.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC0288-04] gi|183576843|gb|EDT97371.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae CDC3059-06] gi|183578482|gb|EDT99010.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae MLV-016] gi|194356824|gb|ACF55272.1| dihydroorotate dehydrogenase A [Streptococcus pneumoniae G54] gi|220674018|emb|CAR68531.1| putative dihydroorotate dehydrogenase [Streptococcus pneumoniae ATCC 700669] gi|225720108|gb|ACO15962.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae 70585] gi|225724110|gb|ACO19963.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae JJA] gi|225726163|gb|ACO22015.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae P1031] gi|225727676|gb|ACO23527.1| dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) [Streptococcus pneumoniae Taiwan19F-14] gi|298238143|gb|ADI69274.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae TCH8431/19A] gi|301793922|emb|CBW36318.1| putative dihydroorotate dehydrogenase [Streptococcus pneumoniae INV104] gi|301799779|emb|CBW32348.1| putative dihydroorotate dehydrogenase [Streptococcus pneumoniae OXC141] gi|301801610|emb|CBW34308.1| putative dihydroorotate dehydrogenase [Streptococcus pneumoniae INV200] gi|302597207|gb|EFL64312.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae BS455] gi|302637569|gb|EFL68056.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP14-BS292] gi|302638553|gb|EFL69017.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP-BS293] gi|302641786|gb|EFL72143.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS458] gi|302644217|gb|EFL74473.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS457] gi|302646507|gb|EFL76733.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS397] gi|306408903|gb|ADM84330.1| Dihydroorotate dehydrogenase [Streptococcus pneumoniae AP200] gi|306484749|gb|ADM91618.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae 670-6B] gi|327390120|gb|EGE88463.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA04375] gi|332073112|gb|EGI83591.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA17570] gi|332202627|gb|EGJ16696.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA41317] gi|332203917|gb|EGJ17984.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA47368] gi|332204772|gb|EGJ18837.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA47901] Length = 311 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDRITNELKAIMVEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|21910627|ref|NP_664895.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes MGAS315] gi|28895686|ref|NP_802036.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes SSI-1] gi|81847448|sp|Q8K6X4|PYRD_STRP3 RecName: Full=Dihydroorotate dehydrogenase; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gi|21904829|gb|AAM79698.1| putative dihydroorotate dehydrogenase [Streptococcus pyogenes MGAS315] gi|28810935|dbj|BAC63869.1| putative dihydroorotate dehydrogenase [Streptococcus pyogenes SSI-1] Length = 311 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + + + +GL L+L+ +P +F + + + PL +K Sbjct: 110 ETILKVIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPY 169 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 170 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 227 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 228 LANVHAFYKRLKPSIHIIGTGGIKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 280 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G + + + N Sbjct: 281 FERVTKELKTIMVEKGYQSLDDFRGN 306 >gi|298373794|ref|ZP_06983783.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon 274 str. F0058] gi|298274846|gb|EFI16398.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon 274 str. F0058] Length = 482 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 26/177 (14%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G + ++ A + ++ + + ++ + + L+ Sbjct: 218 AVGVGEDTLRRVEALINAGVDVITVDSA--------HGHSRNVIDAVRKIRDKFPDIDLV 269 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G +++ E K+G+ + G+ + V G+P + Sbjct: 270 --AGNIVTARAAEELAKAGVNTVKVGIGPGSICTT------------RVVAGVGVPQITA 315 Query: 249 LEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS-SDAVV 302 ++ YC N+ + IA GG++ DI K+I GA + + L +S + V+ Sbjct: 316 IQEVAEYCKTNDIKLIADGGIKFSGDIAKAIAAGADVV-MLGSLLAGCTESPGEEVI 371 >gi|283782030|ref|YP_003372785.1| inosine-5'-monophosphate dehydrogenase [Pirellula staleyi DSM 6068] gi|283440483|gb|ADB18925.1| inosine-5'-monophosphate dehydrogenase [Pirellula staleyi DSM 6068] Length = 494 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 100/337 (29%), Gaps = 95/337 (28%) Query: 64 MTG-GNNKMIERINRNLAI----AAEKTKVAMAVGSQ----RVMFSDHNAIKSFELRQYA 114 MTG G + A A + K+ + S + D + +K F Sbjct: 154 MTGEGLVTATGNVTLEQAEKILTAKKVEKLLLVDDSYCLTGMITIRDIDMMKRF------ 207 Query: 115 PHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSK 174 PH +G +++ GV +A L A+G+ + ++ + + + A++ + Sbjct: 208 PHACK-DKMGRLRVGAAVGVHDLQRA-ERLLAEGVDI-------LVVDSAHGHSANVIAT 258 Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + + D+ ++ V + + +G + G+ + Sbjct: 259 VKEIKKKWDIDVVAGNVA---TREGCRDLIAAGADAVKVGIGPGSICTT----------- 304 Query: 235 GIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 V G+P ++ A + IA GG+R D+ K++ GA + F Sbjct: 305 -RVISGVGVPQITAIYEAAQAARPSGTPIIADGGIRFSGDMTKALAAGAHCVMIGGLFAG 363 Query: 293 PAM-----------------------------------------------DSSD------ 299 A + + Sbjct: 364 LAESPGKTILYQGRTFKAYRGMGSLGAMVKGSSERYRQSGASGGTGKLVPEGVEGRVPFK 423 Query: 300 -AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A+ I L M GT+ +++L T I+ Sbjct: 424 GALSDFIYQLVGGLRAGMGYCGTRTIEQLRTETRFIQ 460 >gi|156050523|ref|XP_001591223.1| hypothetical protein SS1G_07849 [Sclerotinia sclerotiorum 1980] gi|154692249|gb|EDN91987.1| hypothetical protein SS1G_07849 [Sclerotinia sclerotiorum 1980 UF-70] Length = 2130 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + +K V + K+ Sbjct: 1033 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCANPRSRVSVKLVSETGVGIVASGVAKAK 1092 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1093 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1147 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1148 LRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGLATQDPELRKKFKGTP 1207 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1208 EHVINFFYYIANELRAIMAKLGFRTINEM 1236 >gi|332305590|ref|YP_004433441.1| inosine-5'-monophosphate dehydrogenase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172919|gb|AEE22173.1| inosine-5'-monophosphate dehydrogenase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 489 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 63/224 (28%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + DV L+ V G + +G+ + G+ + Sbjct: 256 GVIDRVKKVRADFPDVQLIAGNVATG---AGAKALADAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + + IA GG+R DI K+I GAS + Sbjct: 308 -------RIVTGCGVPQITAVSDAVEALKDTDVPVIADGGIRFSGDIAKAIAAGASSV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEEAPGEVELYQGRYYKSYRGMGSLGAMDQNNGSSDRYFQDSNSAEKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA I ++ + +M L G+ + ++ ++ Sbjct: 420 EGRVAYKGPISTIIHQQMGGLRSAMGLTGSATIDDMRTKAMFVK 463 >gi|13399651|pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary Complex Of A Mutant Enzyme (C671a), Nadph And 5- Fluorouracil gi|13399652|pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary Complex Of A Mutant Enzyme (C671a), Nadph And 5- Fluorouracil gi|13399653|pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary Complex Of A Mutant Enzyme (C671a), Nadph And 5- Fluorouracil gi|13399654|pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary Complex Of A Mutant Enzyme (C671a), Nadph And 5- Fluorouracil Length = 1025 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 107/346 (30%), Gaps = 84/346 (24%) Query: 41 FDEVDPSVEFLGKKLSFPLLI--------SSM------TGGNNKMIERINRNLAIAAE-K 85 D VD SVE G K P + SSM G + + + + I Sbjct: 528 VDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVS 587 Query: 86 TKV-------AMAVGSQRVMFSDH---NAIKSF------ELRQYAPHTVLISNLGAVQLN 129 ++ M Q + ++ EL+ P ++I+++ Sbjct: 588 PRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNK 647 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFADLSSKIALLS 179 D+ + + GAD L L+L+ + + P N + Sbjct: 648 NDW--MELSRKAEASGADALELNLSAPHGMGERGMGLACGQDPELVRNICRW------VR 699 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRD 229 A+ +P K + I + G ++G GT W + + + Sbjct: 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKR 759 Query: 230 LESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS 282 G+ T + ++ +A+GG+ + L+ + GAS Sbjct: 760 TTYG--------GVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGAS 811 Query: 283 LGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + + A+ + D V I+ ++L K ++EL Sbjct: 812 VLQVC-----SAVQNQDFTV--IQDYCTGLKALLYL---KSIEELQ 847 >gi|69246307|ref|ZP_00603880.1| Guanosine monophosphate reductase 2 [Enterococcus faecium DO] gi|257881111|ref|ZP_05660764.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,502] gi|257884774|ref|ZP_05664427.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,501] gi|257889698|ref|ZP_05669351.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,410] gi|257892364|ref|ZP_05672017.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,408] gi|257898740|ref|ZP_05678393.1| guanosine monophosphate reductase 2 [Enterococcus faecium Com15] gi|260559152|ref|ZP_05831338.1| guanosine monophosphate reductase 2 [Enterococcus faecium C68] gi|261207687|ref|ZP_05922372.1| guanosine monophosphate reductase 2 [Enterococcus faecium TC 6] gi|289565805|ref|ZP_06446248.1| guanosine monophosphate reductase [Enterococcus faecium D344SRF] gi|293552858|ref|ZP_06673516.1| guanosine monophosphate reductase [Enterococcus faecium E1039] gi|293563716|ref|ZP_06678156.1| guanosine monophosphate reductase [Enterococcus faecium E1162] gi|294615885|ref|ZP_06695727.1| guanosine monophosphate reductase [Enterococcus faecium E1636] gi|294617438|ref|ZP_06697071.1| guanosine monophosphate reductase [Enterococcus faecium E1679] gi|294623482|ref|ZP_06702330.1| guanosine monophosphate reductase [Enterococcus faecium U0317] gi|314938756|ref|ZP_07846031.1| guanosine monophosphate reductase [Enterococcus faecium TX0133a04] gi|314941142|ref|ZP_07848039.1| guanosine monophosphate reductase [Enterococcus faecium TX0133C] gi|314947907|ref|ZP_07851312.1| guanosine monophosphate reductase [Enterococcus faecium TX0082] gi|314953040|ref|ZP_07855999.1| guanosine monophosphate reductase [Enterococcus faecium TX0133A] gi|314993331|ref|ZP_07858702.1| guanosine monophosphate reductase [Enterococcus faecium TX0133B] gi|314997606|ref|ZP_07862537.1| guanosine monophosphate reductase [Enterococcus faecium TX0133a01] gi|68195321|gb|EAN09771.1| Guanosine monophosphate reductase 2 [Enterococcus faecium DO] gi|257816769|gb|EEV44097.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,502] gi|257820612|gb|EEV47760.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,501] gi|257826058|gb|EEV52684.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,410] gi|257828743|gb|EEV55350.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,231,408] gi|257836652|gb|EEV61726.1| guanosine monophosphate reductase 2 [Enterococcus faecium Com15] gi|260074909|gb|EEW63225.1| guanosine monophosphate reductase 2 [Enterococcus faecium C68] gi|260078070|gb|EEW65776.1| guanosine monophosphate reductase 2 [Enterococcus faecium TC 6] gi|289162443|gb|EFD10300.1| guanosine monophosphate reductase [Enterococcus faecium D344SRF] gi|291591271|gb|EFF22938.1| guanosine monophosphate reductase [Enterococcus faecium E1636] gi|291596292|gb|EFF27552.1| guanosine monophosphate reductase [Enterococcus faecium E1679] gi|291597076|gb|EFF28279.1| guanosine monophosphate reductase [Enterococcus faecium U0317] gi|291602992|gb|EFF33186.1| guanosine monophosphate reductase [Enterococcus faecium E1039] gi|291604294|gb|EFF33788.1| guanosine monophosphate reductase [Enterococcus faecium E1162] gi|313588323|gb|EFR67168.1| guanosine monophosphate reductase [Enterococcus faecium TX0133a01] gi|313592233|gb|EFR71078.1| guanosine monophosphate reductase [Enterococcus faecium TX0133B] gi|313594842|gb|EFR73687.1| guanosine monophosphate reductase [Enterococcus faecium TX0133A] gi|313600002|gb|EFR78845.1| guanosine monophosphate reductase [Enterococcus faecium TX0133C] gi|313641969|gb|EFS06549.1| guanosine monophosphate reductase [Enterococcus faecium TX0133a04] gi|313645676|gb|EFS10256.1| guanosine monophosphate reductase [Enterococcus faecium TX0082] Length = 325 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F + LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEAARIPF--IKKMKKRGLITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDMIQHIKKYLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|320539283|ref|ZP_08038953.1| IMP dehydrogenase [Serratia symbiotica str. Tucson] gi|320030675|gb|EFW12684.1| IMP dehydrogenase [Serratia symbiotica str. Tucson] Length = 487 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 64/225 (28%), Gaps = 72/225 (32%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + +I + D+P++ V + + ++G+ + G+ + Sbjct: 253 HSAGVLQRIRETRAKYPDLPIVGGNVA---TDAGAKALAEAGVSAVKVGIGPGSICTT-- 307 Query: 226 SHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + G+P T ++ + IA GG+R DI K+I GAS Sbjct: 308 ----------RIVTGVGVPQITAIADAVDALEGTGIPVIADGGIRFSGDIAKAIAAGASC 357 Query: 284 GGLASPFL----------------------------------------------KPAMDS 297 + L K + Sbjct: 358 V-MVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 416 Query: 298 SDAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + VA ++++ + M L G + EL +R Sbjct: 417 IEGRVAYKGMLKAIVHQQMGGLRSCMGLTGCATIDELRTKAEFVR 461 >gi|317499356|ref|ZP_07957624.1| glutamine amidotransferase class-II [Lachnospiraceae bacterium 5_1_63FAA] gi|316893325|gb|EFV15539.1| glutamine amidotransferase class-II [Lachnospiraceae bacterium 5_1_63FAA] Length = 1512 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 32/184 (17%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + D + +K V K+G + I+G G + + ++ + Sbjct: 1006 ANRDARISVKLVSEAGVGTVASGVAKAGAQVILISGYDGGTGAAPKNSIYN----AGLPW 1061 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 + G+ + N+ G L +G D+ + +LGA G A+ L Sbjct: 1062 ELGLAEAHQNLIMNDLRNKVIVETDGKLMSGRDVAIAAMLGAEEFGFATAPLVTLGCVMM 1121 Query: 292 --------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K + V+ ++ + +E M LG V EL T Sbjct: 1122 RVCNLDTCPVGVATQNPELRKKFAGKPEYVINFMKFIAQELREYMAKLGVATVDELVGRT 1181 Query: 332 ALIR 335 L++ Sbjct: 1182 DLLK 1185 >gi|167768065|ref|ZP_02440118.1| hypothetical protein CLOSS21_02609 [Clostridium sp. SS2/1] gi|167710394|gb|EDS20973.1| hypothetical protein CLOSS21_02609 [Clostridium sp. SS2/1] Length = 1514 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 32/184 (17%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + D + +K V K+G + I+G G + + ++ + Sbjct: 1008 ANRDARISVKLVSEAGVGTVASGVAKAGAQVILISGYDGGTGAAPKNSIYN----AGLPW 1063 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 + G+ + N+ G L +G D+ + +LGA G A+ L Sbjct: 1064 ELGLAEAHQNLIMNDLRNKVIVETDGKLMSGRDVAIAAMLGAEEFGFATAPLVTLGCVMM 1123 Query: 292 --------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K + V+ ++ + +E M LG V EL T Sbjct: 1124 RVCNLDTCPVGVATQNPELRKKFAGKPEYVINFMKFIAQELREYMAKLGVATVDELVGRT 1183 Query: 332 ALIR 335 L++ Sbjct: 1184 DLLK 1187 >gi|119196223|ref|XP_001248715.1| hypothetical protein CIMG_02486 [Coccidioides immitis RS] Length = 2121 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1040 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPQARVSVKLVSEVGVGIVASGVAKAKADH 1099 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1100 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDGQLRT 1154 Query: 270 GVDILKSIILGASLGGLAS---------------------------PFLKPAMDSS-DAV 301 G D+ + +LGA G A+ P L+ + + + V Sbjct: 1155 GRDVAIACLLGAEEWGFATAPLIAMGCIMMRKCHLGTCPVGIATQDPALREKFEGTPEHV 1214 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + + E+ L+R Sbjct: 1215 INFFYYVANELRAIMAKLGMRTINEMVGRAELLR 1248 >gi|90410883|ref|ZP_01218897.1| inositol-5-monophosphate dehydrogenase [Photobacterium profundum 3TCK] gi|90328096|gb|EAS44407.1| inositol-5-monophosphate dehydrogenase [Photobacterium profundum 3TCK] Length = 487 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 62/221 (28%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I A + ++ V ++ + +G+ + G+ + Sbjct: 256 GVLQRIRETREAFPELQIIGGNVA---TAAGARALIDAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R D+ K+I GAS + Sbjct: 308 -------RIVTGVGVPQLTAISDAVDAASEFGIPVIADGGIRYSGDMCKAIAAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVELYQGRAYKSYRGMGSLGAMSQGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA I+ + + SM L G+ + +L +R Sbjct: 421 VAYKGHIKEIVHQQMGGLRSSMGLTGSATIDDLRTKAEFVR 461 >gi|78188467|ref|YP_378805.1| IMP dehydrogenase [Chlorobium chlorochromatii CaD3] gi|78170666|gb|ABB27762.1| inosine-5'-monophosphate dehydrogenase [Chlorobium chlorochromatii CaD3] Length = 497 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 57/223 (25%), Gaps = 73/223 (32%) Query: 171 LSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + + S D+ ++ V + + +K+G + G+ + Sbjct: 263 VLDMVKKIKSHYPDLQVIAGNVA---TPEAVRDLVKAGADCVKVGIGPGSICTT------ 313 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T + IA GG++ DI K++ GA + Sbjct: 314 ------RIVAGVGMPQLTAIMKCAEEAAKTNTPIIADGGIKYSGDIAKALAAGADSVMMG 367 Query: 288 SPFL------------------------------------------------KPAMDSSD 299 S F K + + Sbjct: 368 SIFAGTDESPGETVLYEGRKFKTYRGMGSLGAMSEPEGSSDRYFQDSSSEAKKYVPEGIE 427 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L SM G + EL NT +R Sbjct: 428 GRIPAKGTLDEVVYQLIGGLKSSMGYCGVATIDELKQNTRFVR 470 >gi|310796777|gb|EFQ32238.1| glutamate synthase [Glomerella graminicola M1.001] Length = 2112 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1040 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRISVKLVSEVGVGIVASGVAKAK 1099 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1100 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1154 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1155 LRTGRDVAMACLLGAEEWGFATTPLIAMGCIFMRKCHLNSCPVGIATQDPELRKKFTGTP 1214 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1215 EHVINFFYYVANELRAIMAKLGFRTINEM 1243 >gi|291561063|emb|CBL39863.1| Glutamate synthase domain 2 [butyrate-producing bacterium SSC/2] Length = 1512 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 32/184 (17%) Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 + D + +K V K+G + I+G G + + ++ + Sbjct: 1006 ANRDARISVKLVSEAGVGTVASGVAKAGAQVILISGYDGGTGAAPKNSIYN----AGLPW 1061 Query: 240 DWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 + G+ + N+ G L +G D+ + +LGA G A+ L Sbjct: 1062 ELGLAEAHQNLIMNDLRNKVIVETDGKLMSGRDVAIAAMLGAEEFGFATAPLVTLGCVMM 1121 Query: 292 --------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNT 331 K + V+ ++ + +E M LG V EL T Sbjct: 1122 RVCNLDTCPVGVATQNPELRKKFAGKPEYVINFMKFIAQELREYMAKLGVATVDELVGRT 1181 Query: 332 ALIR 335 L++ Sbjct: 1182 DLLK 1185 >gi|227832310|ref|YP_002834017.1| putative inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] gi|262183833|ref|ZP_06043254.1| inosine 5-monophosphate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] gi|227453326|gb|ACP32079.1| putative inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum ATCC 700975] Length = 398 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 37/190 (19%) Query: 124 GAVQLNYDFGVQKAHQAVHVL---GADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLS 179 V + Q A + V+ GA+ LF+H + E +Q G + Sbjct: 129 SGVTVAVRVSPQHARELAPVVIKAGAELLFIHGTLISAEHVQTGGEPL------NLKEFI 182 Query: 180 SAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQ 239 ++D P++ V +++G + T+ + Sbjct: 183 GSLDTPVIAGGVA---DYTTALHLMRAGAAGIIVGSGVNTNPETV--------------- 224 Query: 240 DWGIPTPLSLEMARPYCNE---------AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 IP ++ + +A G + DI K+I GA L Sbjct: 225 GIDIPMATTIADVAAARRDYLDETGGRYVHVLADGDIFTSADIAKAIACGADGVVLGPVL 284 Query: 291 LKPAMDSSDA 300 + A Sbjct: 285 ARAAEAGGKG 294 >gi|257081993|ref|ZP_05576354.1| guanosine monophosphate reductase 2 [Enterococcus faecalis E1Sol] gi|256990023|gb|EEU77325.1| guanosine monophosphate reductase 2 [Enterococcus faecalis E1Sol] Length = 325 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVV-------PANMQTIIDEKIAESLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D A F +++ ++ + GV++ A V L Sbjct: 59 NG-----YFYIMHRFDEEARVPF-IKKMQQKGLI--------TSISVGVKEGEYAFVETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GL + + + + ++ + + I L + ++ G + + Sbjct: 105 AREGL------VPDYVTIDIAHGHSNAVINMIQHLKKTLPETFVI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GA++ + S F + V Sbjct: 206 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|69248093|ref|ZP_00604622.1| Dihydroorotate dehydrogenase 1 [Enterococcus faecium DO] gi|68194567|gb|EAN09059.1| Dihydroorotate dehydrogenase 1 [Enterococcus faecium DO] Length = 315 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 30/247 (12%) Query: 103 NAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL----FLHLNPLQE 158 ++E Q + L ++ VQ+ + + + G L+L+ Sbjct: 83 EYALAYEKVQENQNQPLFFSI------AGMSVQENLEMLEKIEKSGFNGITELNLSCPNV 136 Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGLSSMDIELGLKSGIRYFDIAG 215 +P +F + + S PL +K ++ + + Y + Sbjct: 137 PGKPQLAYDFEATYETLKEVFSIFSKPLGIKLPPYFDFAHFDQMADILNQFPLTYVNAIN 196 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWG----IPTPLSLEMARPY----CNEAQFIASGGL 267 G + F G PT L R + E Q I +GG+ Sbjct: 197 SVGNGLYIDTEQEAVVIKPKEGFGGIGGEYIKPTA--LANVRAFYTRLKPEIQIIGTGGI 254 Query: 268 RNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 R G D + ++ GAS+ + + K + + + KE M G + E Sbjct: 255 RTGQDAFEHLLCGASMLQIGTELHK---EGPE----IFSRIIKELTQIMSEKGYTSIDEF 307 Query: 328 YLNTALI 334 I Sbjct: 308 KGKLRTI 314 >gi|332712298|ref|ZP_08432226.1| IMP dehydrogenase family protein [Lyngbya majuscula 3L] gi|332349104|gb|EGJ28716.1| IMP dehydrogenase family protein [Lyngbya majuscula 3L] Length = 387 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 71/390 (18%), Positives = 109/390 (27%), Gaps = 119/390 (30%) Query: 25 FFDDWHLIH--RALPEISFDEVDPSVEFLGKKLSFPLLISSMTG---------------- 66 D+ L+ R L D G + P++ S+M G Sbjct: 16 GIDEIALVPGQRTL---DPSLADTRWRIGGIEREIPIIASAMDGVIDVSMAVKLSQIGAM 72 Query: 67 GNNKMIE---------RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHT 117 G + I +A V + I + +R+ Sbjct: 73 GVLNLEGIQTRYSDPSPILDRIASVGNSEFVPLMQELYSSPIK-PELI-TQRIREIKDQG 130 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL--------HLNPLQEIIQPNGNTNFA 169 + AV L G K Q V GAD +F+ HL+P E I P Sbjct: 131 A----IAAVSLTP-AGASKYSQVVAEAGADLMFVQATVVSTAHLSP--ESINPLD----- 178 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GT 219 +A M +P++L G ++ +K G + G G G Sbjct: 179 -----LAQFCQDMPMPVIL---GNCVTYDVALNLMKVGATAVLVGIGPGAACTSRGVLGV 230 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 + + D + + + G N Q IA GGL G DI K I Sbjct: 231 GVPQATAVADCAAARDDYYLETG--------------NYVQVIADGGLITGGDICKCIAC 276 Query: 280 GASLGGLASPF-----------------------------------LKPAMDSSDAVVAA 304 GA + SPF L+ + + Sbjct: 277 GADGVMIGSPFARAKEAPGQGFHWGMATPSSVLPRGTRIKVGSTGTLEQILTGPAQMDDG 336 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLNTALI 334 +L SM LG K ++E+ +I Sbjct: 337 THNLLGALKTSMGTLGAKNLKEMQQVEVVI 366 >gi|152992501|ref|YP_001358222.1| glutamate synthase (NADPH), large chain [Sulfurovum sp. NBC37-1] gi|151424362|dbj|BAF71865.1| glutamate synthase (NADPH), large chain [Sulfurovum sp. NBC37-1] Length = 1471 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 34/182 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + I S R + Sbjct: 995 KARIAVKLVSTAGVGTIAAGVAKAYADKIIISGGDGGTGAAPIGSIR-----FAGNPWEL 1049 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS------------------- 282 G+ + A GGL+ +D++K+ I GA Sbjct: 1050 GLYEAHNSLKANNLRGNVTVETDGGLKTALDVIKAAIFGAEEYAFGTGALVIVGCIMLRV 1109 Query: 283 ------LGGLA--SPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 G+A +P L+ VV L +E + LG + ++E+ T L Sbjct: 1110 CHLNTCGVGVATQNPHLRERFKGNVQKVVNYFTLLAEEVREILASLGYRSLEEIVGKTEL 1169 Query: 334 IR 335 ++ Sbjct: 1170 LK 1171 >gi|328856530|gb|EGG05651.1| hypothetical protein MELLADRAFT_48761 [Melampsora larici-populina 98AG31] Length = 2178 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT + R + + G+ Sbjct: 1111 LVSEVGVGIVASGVA---KAKADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1162 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G +R G D+ + +LGA G A+ Sbjct: 1163 THQTLVLNDLRGRVCLQTDGQIRTGRDVAIAALLGAEEFGFATTPLIAMGCIMMRRCHQN 1222 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ + V+ + +E M LG + + E+ Sbjct: 1223 TCPVGVATQDPVLRAKFTGQPEHVINFFYYVAEELRSYMAKLGFRTLNEM 1272 >gi|269128448|ref|YP_003301818.1| inosine-5'-monophosphate dehydrogenase [Thermomonospora curvata DSM 43183] gi|268313406|gb|ACY99780.1| inosine-5'-monophosphate dehydrogenase [Thermomonospora curvata DSM 43183] Length = 500 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 30/213 (14%) Query: 93 GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 G R + + + +KS + + +GA G + +A ++ A + Sbjct: 195 GRLRGLITVKDFVKSEQYPRATKDADGRLVVGAA---VGVGEEGIARAQALVEAGVDVIV 251 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 ++ Q + + IA + + V ++ V + + + +G Sbjct: 252 VDVAQG--------HSKGVLDTIAKIKANCRGVDVIGGNVA---TRAGAQALIDAGADGV 300 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRN 269 + G+ + V G+P ++ A I GGL+ Sbjct: 301 KVGVGPGSICTT------------RVIAGVGVPQITAIYEASRAALPAGVPVIGDGGLQY 348 Query: 270 GVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 DI K+I GAS + L +S ++ Sbjct: 349 SGDIAKAIAAGASSV-MLGSLLAGVEESPGELI 380 >gi|118475093|ref|YP_891788.1| inosine 5'-monophosphate dehydrogenase [Campylobacter fetus subsp. fetus 82-40] gi|118414319|gb|ABK82739.1| inosine-5'-monophosphate dehydrogenase [Campylobacter fetus subsp. fetus 82-40] Length = 483 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 28/195 (14%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ P+ G +++ GV + +AV + A + ++ + + + Sbjct: 202 RKEYPNANK-DKFGRLRVAAAMGVGQLDRAVALAKAG--------VDALVMDSAHGHSKG 252 Query: 171 LSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + + L+ + DV +++ V + + + +G + G+ + Sbjct: 253 IIDTLKLIKENVKDVDVIVGNVA---NPKAVIDLINAGADGIKVGIGPGSICTT------ 303 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T ++ E IA GG++ D K++ GAS + Sbjct: 304 ------RIVSGVGVPQITAIADCADEAKKFEIPVIADGGIKYSGDFAKALAAGASCI-MV 356 Query: 288 SPFLKPAMDSSDAVV 302 L +S +V Sbjct: 357 GSLLAGCDESPGELV 371 >gi|293571959|ref|ZP_06682973.1| guanosine monophosphate reductase [Enterococcus faecium E980] gi|291607977|gb|EFF37285.1| guanosine monophosphate reductase [Enterococcus faecium E980] Length = 325 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F + LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEAARIPF--IKKMKKRGLITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDIIQHIKKYLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|291618402|ref|YP_003521144.1| GuaB [Pantoea ananatis LMG 20103] gi|291153432|gb|ADD78016.1| GuaB [Pantoea ananatis LMG 20103] gi|327394795|dbj|BAK12217.1| Inosine-5'-monophosphate dehydrogenase GuaB [Pantoea ananatis AJ13355] Length = 488 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 59/221 (26%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I + ++ G + +++G+ + G+ + Sbjct: 256 GVLQRIRETRAKYPDLEIVG--GNVATGAGALALVEAGVSAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P T +S +A IA GG+R DI K+I GAS + Sbjct: 308 ------RIVTGVGVPQITAVSDAVAALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-MV 360 Query: 288 SPFL----------------------------------------------KPAMDSSDAV 301 L K + + Sbjct: 361 GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR 420 Query: 302 VAAIESLRK-------EFIVSMFLLGTKRVQELYLNTALIR 335 VA L++ M L G + + +L +R Sbjct: 421 VAYKGRLKEIVHQQMGGLRSCMGLTGCQTIDDLRTKAEFVR 461 >gi|311268887|ref|XP_003132249.1| PREDICTED: LOW QUALITY PROTEIN: inosine-5'-monophosphate dehydrogenase 2-like [Sus scrofa] Length = 538 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 15/119 (12%) Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI------------GIVFQ 239 G +++ + + +G+ + G+ E+ + DI G Sbjct: 302 GNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEAAPKIPPDIKSHSPKCPSTVTGCYML 361 Query: 240 DWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 G P ++ Y IA GG++N I K++ LGAS + L + Sbjct: 362 ACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTV-MMGSLLAATTE 419 >gi|228951847|ref|ZP_04113945.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807770|gb|EEM54291.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 363 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 85/263 (32%), Gaps = 54/263 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS--FEL 110 K+ +P++ + M G L A + +G+ + I+ + + Sbjct: 11 LKIEYPVVQAGMAG------AITTPELVAAVSNSG---GLGTLGAGYMSPEQIREAIYRI 61 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-IQPNGNTNFA 169 R+ +V L +Q + V+ A L +N +E+ I+ G Sbjct: 62 RELTDKPF------SVNLLVTKEIQIEEEKVN--EAKVLLSGVN--RELGIEVEGTLKLP 111 Query: 170 DLSSKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIELGLKSGIRY 210 + + VP++ +K +G + ++ + G+ Sbjct: 112 KSYKEQLQVLLDEKVPVVSFAFQTLEKEEINDLKRSGIKVIGTATHVKEAKVLAELGVDI 171 Query: 211 FDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 G GG + I RD I T + +A+GG+ Sbjct: 172 IVGQGSEAGGHRGTFIGKERDAM-----------IGTFALIPQLVGAIPHIPIVAAGGVM 220 Query: 269 NGVDILKSIILGASLGGLASPFL 291 NG ++ ++ LGA + S FL Sbjct: 221 NGQGLVAALALGAEGVQMGSAFL 243 >gi|323487961|ref|ZP_08093217.1| 2-nitropropane dioxygenase NPD [Planococcus donghaensis MPA1U2] gi|323398385|gb|EGA91175.1| 2-nitropropane dioxygenase NPD [Planococcus donghaensis MPA1U2] Length = 356 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 60/288 (20%) Query: 45 DPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVA------MAVGSQRV 97 + ++ +P++ + M GG + + + + MA + R Sbjct: 3 SLQTKICELFEIEYPIVQAGMAGGPTTV-----ELVVEVSNAGGLGTLGAAYMAPDALRK 57 Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG-VQKAHQAVHVLGADGLFLHLNPL 156 + Q N+ A DF + + + + ++ +L Sbjct: 58 AIKE---------IQANTDKPFAVNIFASAEQDDFSRLAEVQKVLSPFRSELAIRNL--- 105 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLL-------------------LKEVGCGLSS 197 + + S++ + VP++ +K V + Sbjct: 106 ------ESAYSSPNWSAEQFDICIEEGVPIISAAFGCFSKEQMTTVQERQVKTVVMITTV 159 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF-QDWGIPTPLSLEMARPYC 256 + L KSG G S HR S F G +SL Sbjct: 160 EEAILAEKSGANAVVAQG------SEAGGHRSTFSLAQHSFGAQIG---TISLVPQVVDA 210 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA+GG+ +G ++ S+ LGA + + F+ + A+ Sbjct: 211 IKIPVIAAGGIVDGRGLIASLALGAQGVQIGTRFVTAKESGAHAIYKQ 258 >gi|307187474|gb|EFN72550.1| Glutamate synthase [NADH], amyloplastic [Camponotus floridanus] Length = 1987 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + + +K V + K Sbjct: 1010 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVAAGVAKGK 1069 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I + + GI + + A Sbjct: 1070 AEHVVISGHDGGTGASSWTGI--------KYAGLPWELGIAETHQVLTLNNLRSRIIVQA 1121 Query: 264 SGGLRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMD 296 G LR G DI+ + +LGA G ++ P L+ + Sbjct: 1122 DGQLRTGFDIVVAALLGADEFGFSTAPLIAMGCTMMRKCHLNTCPVGIATQDPVLRKKFE 1181 Query: 297 S-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ +L +E M LG ++ Q+L T L++ Sbjct: 1182 GKPEHVINFFFALAEEVRSHMANLGIRKFQDLIGRTDLLK 1221 >gi|261403356|ref|YP_003247580.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus vulcanius M7] gi|261370349|gb|ACX73098.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus vulcanius M7] Length = 495 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 32/194 (16%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA--DGLFLHLNPLQEIIQPNGNTNF 168 R+ P G + + G +A ++ A D + + + F Sbjct: 205 RKKYPQAS-RDKKGRLLVAAACGPHDFERAKALIEAEVDAIAIDCAHAHNLKVVENVKKF 263 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + D+ L+ VG + + +++G + G+ + Sbjct: 264 KKMLEGT-------DIKLI---VGNIATKEAAKDLIEAGADILKVGIGPGSICTT----- 308 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 V G+P ++ E IA GG+R DI K+I +GA Sbjct: 309 -------RVVAGVGVPQLTAVANVADIAKEHNVPVIADGGIRYSGDIAKAIAVGADAV-- 359 Query: 287 ASPFLKPAMDSSDA 300 L + +D Sbjct: 360 ---MLGSLLAGTDE 370 Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 14 CKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIE 73 K FDD L+ A + D S G KL+ P++ ++M K Sbjct: 3 LKKLMEAETAYTFDDVLLVPNA-SHVEPKNTDVSTNLCGLKLNIPIISAAMDTVTEK--- 58 Query: 74 RINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 +AIA + +G + + + + A V+ + ++ D Sbjct: 59 ----EMAIALARLG---GLGVIHRNMTIEEQVHQVQAVKKADEVVIKDVI---TVSPDDT 108 Query: 134 VQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 +++A + GL + +N E+I + + + K + ++ KEV Sbjct: 109 IEEAINVMETYSISGLPV-VNEKDELIGIITHRDVKAIEDKTKKVKE-----VMTKEV 160 >gi|332364420|gb|EGJ42194.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK355] Length = 312 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 16/183 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + S PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFSYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-ATFERITAELKAIMEEKGYESLEDFRGKLKY 309 Query: 334 IRH 336 I Sbjct: 310 IEG 312 >gi|306830882|ref|ZP_07464044.1| dihydroorotate dehydrogenase A [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426905|gb|EFM30015.1| dihydroorotate dehydrogenase A [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 311 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 17/202 (8%) Query: 136 KAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 +AV GL L+L+ +P +F + + + + PL +K Sbjct: 111 TILKAVQDSDYQGLVELNLSCPNVPGKPQIAYDFETTETLLRDIFTYFTKPLGVKLPPYF 170 Query: 195 LSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIVFQDWGIPTPLS 248 + + + + + + G + IE ++ G + D+ PT L+ Sbjct: 171 DIAHFDRAAAIFNQFPLTFVNCINSIG-NGLIIEDETVLIKPKNGFGGIGGDYVKPTALA 229 Query: 249 LEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 A + Q I +GG++ G D + I+ GAS+ L L + A E Sbjct: 230 NVHAFYQRLNPSIQIIGTGGIKTGRDAFEHILCGASMVQL-GTILH--QEGP----AVFE 282 Query: 307 SLRKEFIVSMFLLGTKRVQELY 328 + E M G K +++ Sbjct: 283 RITNELKAIMEEKGYKSLEDFR 304 >gi|239929428|ref|ZP_04686381.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291437754|ref|ZP_06577144.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291340649|gb|EFE67605.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 500 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 30/174 (17%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 + +A + A FL ++ + + + + ++ + S++ V ++ Sbjct: 230 AVGASPEALERAQALAEAGVDFLVVDT--------SHGHNRNALNWMSKIKSSVGVDVIG 281 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 V + + + +G+ + G+ + V G+P + Sbjct: 282 GNVA---TRDGAQALIDAGVDGIKVGVGPGSICTT------------RVVAGIGVPQVTA 326 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + A I GGL+ DI K++ GA L + + Sbjct: 327 IYEASLAARPAGIPLIGDGGLQYSGDIGKALAAGADTV-----MLGSLLAGCEE 375 >gi|254482715|ref|ZP_05095953.1| glutamate synthase domain family protein [marine gamma proteobacterium HTCC2148] gi|214037074|gb|EEB77743.1| glutamate synthase domain family protein [marine gamma proteobacterium HTCC2148] Length = 1480 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S R S + + Sbjct: 995 VSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTAASPLTSIRYAGSPFELGLAE---- 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 + A GGL+ G+D++K+ ILGA G +P + Sbjct: 1051 -VQQTLRGNNLRGSIRLQADGGLKTGLDVIKAAILGAESFGFGTAPMVALGCKYLRICHL 1109 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + V+ + E + LG ++EL T L+ Sbjct: 1110 NNCATGVATQHQKLRDDHFNGTVEMVMNYFNFVATETREWLARLGVASLEELIGRTDLLE 1169 >gi|116617760|ref|YP_818131.1| inosine-5'-monophosphate dehydrogenase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096607|gb|ABJ61758.1| inosine-5'-monophosphate dehydrogenase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 380 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 86/273 (31%), Gaps = 37/273 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAE 84 F+D L+ ++ + V + KL+ PLL ++M + R LA Sbjct: 17 FEDVKLVDDLQSTVTPESVSVTTSLTPTLKLNIPLLSAAM---DTVTEARFATALAKL-- 71 Query: 85 KTKVAM----AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 + + S + +F+ + V V + Sbjct: 72 -GGLGVIHKNMTISAQADEVRKVKTATFDSADFPNAAVDAKGHLLVAGAVGVTNDTVDRV 130 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMD 199 ++ A + L+ + + + K++ + S ++ ++ G + Sbjct: 131 QAMVEAGADAIVLDSA--------HGHSEGVLRKVSEVRSTFPNLNIIA---GNIATREG 179 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCN 257 +G I G+ + V G+P ++ A Sbjct: 180 AAALYDAGADVVKIGIGPGSICTT------------RVVAGIGVPQVSAIRDAALEAAAR 227 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 + IA GG++ +DI+K+I G + L S F Sbjct: 228 GKKIIADGGVKTSLDIVKAISAGGNAVMLGSMF 260 >gi|332363171|gb|EGJ40956.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK49] Length = 312 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITTELKAIMEEKGYENLEDFR 304 >gi|313232715|emb|CBY19385.1| unnamed protein product [Oikopleura dioica] Length = 1278 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 111/349 (31%), Gaps = 65/349 (18%) Query: 41 FDEVDPSVEFLGKKLSFPLLI--------SSM---------------TGGNN-----KMI 72 D+VD SVE G + P + S+M T G + + Sbjct: 776 IDDVDISVEICGVRFPNPFGLASAPPTTNSAMIRRSFEAGWGFTVTKTFGCDHDLVTNVA 835 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF----ELRQYAPHTVLISNLGAVQL 128 RI R + + + + S+ +A + EL+ P ++IS++ A Sbjct: 836 PRITRG-TTSGHQYGPGLGSFINIELISEKSAEYWYRSIRELKDDFPEKIVISSIMASYN 894 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-----LSSKIALLSSAMD 183 D+ GAD L L+L+ + + G + + + Sbjct: 895 KEDWQELAIGSC--KAGADMLELNLSCPHGMGE-RGMGLACGQNTDMVYNISKWVKEVTT 951 Query: 184 VPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRDLESD 233 VP K I G ++G GT W + S + ++ Sbjct: 952 VPFFPKMTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDGTPWPGVGS--EKKTT 1009 Query: 234 IGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G V + P + ++ +A+GG+ + ++ GAS + Sbjct: 1010 YGGVAGNAIRPIAMKAVSAIARAIPGFPILATGGIDSADVSMQYFNAGASAMQVC----- 1064 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 A+ + D V ++ ++L G + EL + +HQ Sbjct: 1065 SAVQNQDYTV--VQDYISGLKTLLYLKGKSSIGELTNWDGQSPPTPKHQ 1111 >gi|313213832|emb|CBY40684.1| unnamed protein product [Oikopleura dioica] Length = 711 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 111/349 (31%), Gaps = 65/349 (18%) Query: 41 FDEVDPSVEFLGKKLSFPLLI--------SSM---------------TGGNN-----KMI 72 D+VD SVE G + P + S+M T G + + Sbjct: 209 IDDVDISVEICGVRFPNPFGLASAPPTTNSAMIRRSFEAGWGFTVTKTFGCDHDLVTNVA 268 Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF----ELRQYAPHTVLISNLGAVQL 128 RI R + + + + S+ +A + EL+ P ++IS++ A Sbjct: 269 PRITRG-TTSGHQYGPGLGSFINIELISEKSAEYWYRSIRELKDDFPEKIVISSIMASYN 327 Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD-----LSSKIALLSSAMD 183 D+ GAD L L+L+ + + G + + + Sbjct: 328 KEDWQELAIGSC--KAGADMLELNLSCPHGMGE-RGMGLACGQNTDMVYNISKWVKEVTT 384 Query: 184 VPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTSWSRIESHRDLESD 233 VP K I G ++G GT W + S + ++ Sbjct: 385 VPFFPKMTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDGTPWPGVGS--EKKTT 442 Query: 234 IGIVFQDWGIPTPL-SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 G V + P + ++ +A+GG+ + ++ GAS + Sbjct: 443 YGGVAGNAIRPIAMKAVSAIARAIPGFPILATGGIDSADVSMQYFNAGASAMQVC----- 497 Query: 293 PAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----LNTALIRHQ 337 A+ + D V ++ ++L G + EL + +HQ Sbjct: 498 SAVQNQDYTV--VQDYISGLKTLLYLKGKSSIGELTNWDGQSPPTPKHQ 544 >gi|149915200|ref|ZP_01903728.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. AzwK-3b] gi|149810921|gb|EDM70760.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. AzwK-3b] Length = 482 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 13/109 (11%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ + +G + G+ + + G+P ++ Sbjct: 277 TAEATRALIDAGADAVKVGIGPGSICTT------------RMVAGVGVPQLTAIMDCAQA 324 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA GG++ D K+I GAS + L +S V+ Sbjct: 325 AGDVPVIADGGIKFSGDFAKAIAAGAS-CAMVGSMLAGTDESPGEVILY 372 >gi|125717242|ref|YP_001034375.1| dihydroorotate dehydrogenase 1A [Streptococcus sanguinis SK36] gi|125497159|gb|ABN43825.1| Dihydroorotate dehydrogenase, putative [Streptococcus sanguinis SK36] Length = 312 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITTELKAIMEEKGYENLEDFR 304 >gi|332358170|gb|EGJ36000.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK1056] Length = 311 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSVG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A R E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYRRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITTELKAIMEEKGYESLEDFR 304 >gi|324994230|gb|EGC26144.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK678] gi|325697929|gb|EGD39813.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK160] gi|327459449|gb|EGF05795.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK1] gi|327490648|gb|EGF22429.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK1058] Length = 312 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + VVA E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLYK------EGVVA-FERITTELKTIMEEKGYESLEDFR 304 >gi|257054544|ref|YP_003132376.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis DSM 43017] gi|256584416|gb|ACU95549.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis DSM 43017] Length = 514 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 31/223 (13%) Query: 84 EKTKVAMAVGSQRVMFSDHNAIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 EK + G R + + + +K+ + L P L+ +GA G +A+ Sbjct: 201 EKLPIVDGDGKLRGLITVKDFVKTEQYPLATKDPDGRLL--VGAA---VGVGEDGHQRAM 255 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 ++ A L ++ + + + +A L + + + G + + Sbjct: 256 ALVDAGVDVLMVDTA--------HGHSRAVVEMVARLKKELGDTVDVVG-GNVATRAGAQ 306 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EA 259 + +G + G+ + V G+P ++ A C Sbjct: 307 ALVDAGADAVKVGVGPGSICTT------------RVVAGVGVPQISAIYEADKACRPAGV 354 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 I GG++ DI K+I GAS + L +S ++ Sbjct: 355 PVIGDGGIQYSGDIAKAIAAGASSV-MLGSLLAGTEESPGELI 396 >gi|170078051|ref|YP_001734689.1| dihydroorotate dehydrogenase 2 [Synechococcus sp. PCC 7002] gi|169885720|gb|ACA99433.1| dihydroorotate dehydrogenase [Synechococcus sp. PCC 7002] Length = 338 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 105/296 (35%), Gaps = 31/296 (10%) Query: 45 DPSVEFLGKKLSFPLLISSMT--------------GGNNKMI------ERINRNLAIAAE 84 D + ++LG L PL++ + G ++ E+I + Sbjct: 2 DLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELHH 61 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSF--------ELRQYAPHTVLISNLGAVQLNYDFGVQK 136 ++ + + NA F E + A V + + ++ ++ + Sbjct: 62 HFTYGTDSFAEALNYFPENASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWEH 121 Query: 137 AHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLS 196 + + GAD + L++ + I NG+ + + + +++P+ +K + Sbjct: 122 TAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIVRTVRENLNIPVAVKLSPFFSN 181 Query: 197 SMD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 + + + +G + R IE+ + I D +P + M Sbjct: 182 MANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLP-MRWIAMLYGR 240 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 + F A+ G++ G D +K ++ GA + L + L+ + + + + +E Sbjct: 241 L-DVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEE 295 >gi|18309974|ref|NP_561908.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens str. 13] gi|18144652|dbj|BAB80698.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 355 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 33/246 (13%) Query: 78 NLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 NLA A K + + G+Q + + L +NL A++ + +K Sbjct: 30 NLASAVTKAGGIGIISGAQPGYLE-----------EDFKNNPLEANLRALKKHIRIAKEK 78 Query: 137 AHQAVH----VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL--LLKE 190 + + ++ + H+ + + + A L S + + +V + ++ Sbjct: 79 SQNGIIGVNLMVAMNNYAEHVKAAID-SGVDLIISGAGLPSHLPKFTKGSNVKIAPIVSS 137 Query: 191 VGCGLSSMDIELG----LKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + I K I G GG ES D D I Sbjct: 138 LKAA---KVILKLWDRHHKVSPDMIVIEGPKAGGHLGFTKESLEDESKKFDSTILD--II 192 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 S+ Y + I +GG+ +G DI K + LGAS +A+ F+ A DA + Sbjct: 193 KETSIYE-DKYEKKIPIIVAGGIFDGKDIAKYLKLGASGVQMATRFV--ATYECDANIKF 249 Query: 305 IESLRK 310 E+ Sbjct: 250 KEAYIN 255 >gi|315586480|gb|ADU40861.1| GMP reductase [Helicobacter pylori 35A] Length = 333 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 88/286 (30%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 14 YEDIQLIPNKCIVNSRSECDTTVTLGKHAFKMPVV-------PANMQTIINDSIAEFLAE 66 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + G+ R+ F + I S + +LI L +L D+ Sbjct: 67 NGYFYIMHRFDGAARIPFVKKMKERQRISSISVGVKKEEYLLIEELAKQKLASDY----- 121 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + E+IQ + + +++ + P Sbjct: 122 ------ITIDIAHGHSNSVIEMIQ-----HIKTHLPETFVIAGNVGTP------------ 158 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 159 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCSKAAR 208 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 209 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 253 >gi|257878103|ref|ZP_05657756.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,230,933] gi|257812331|gb|EEV41089.1| guanosine monophosphate reductase 2 [Enterococcus faecium 1,230,933] Length = 325 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIINSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F + LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEAARIPF--IKKMKKRGLITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDMIQHIKKYLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|51894052|ref|YP_076743.1| inosine-5'-monophosphate dehydrogenase [Symbiobacterium thermophilum IAM 14863] gi|51857741|dbj|BAD41899.1| inosine-5'-monophosphate dehydrogenase [Symbiobacterium thermophilum IAM 14863] Length = 486 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 79/238 (33%), Gaps = 39/238 (16%) Query: 60 LISSMTGGNNKMIERINRNLAIAAEKTKVAM----AVGSQRVMFSDHNAIKSFELRQYAP 115 LI++ G + I R+ A+ K+ + V + D K + Sbjct: 160 LITAPVGTTLEQAREILRH----AKVEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDE 215 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 H L+ GA D +++A V G D L L + + + + + Sbjct: 216 HGRLLC--GAAVGVSDDLMERAGALVDA-GVDVLVL----------DSAHGHSRGIMEAL 262 Query: 176 ALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDI 234 + V ++ V + +++G + G+ + Sbjct: 263 RKVKRNFPQVQVIAGNVA---TYEGTRDLIEAGADAVKVGIGPGSICTT----------- 308 Query: 235 GIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 V G+P ++ + + + IA GG++ DI K+I GAS + S F Sbjct: 309 -RVVAGIGVPQITAIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVMIGSLF 365 >gi|297621868|ref|YP_003710005.1| Inosine-5'-monophosphate dehydrogenase [Waddlia chondrophila WSU 86-1044] gi|297377169|gb|ADI38999.1| Inosine-5'-monophosphate dehydrogenase [Waddlia chondrophila WSU 86-1044] Length = 522 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 30/192 (15%) Query: 112 QYAPHTVL-ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGN--TNF 168 Q P+ L +N V + KA + +L + + Q Q + Sbjct: 224 QNFPNAALDAANSLLVGAAVETWKSKAEARIEILSNVVDVIIFDTSQGYTQYEIDLIRWT 283 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++ E +K+G + G+ + E Sbjct: 284 KHHHPHLQVIGGNV------------VTEEACEALIKAGADAIRVGMGSGSICTTQEVGG 331 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 G T + + + IA GG+ DI+K++ LGA Sbjct: 332 IGR----------GQATAVYACASTCRKHGVPVIADGGISKSSDIVKALALGAETV---- 377 Query: 289 PFLKPAMDSSDA 300 L + S+D Sbjct: 378 -MLGSLLASTDE 388 >gi|227551274|ref|ZP_03981323.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecium TX1330] gi|257896105|ref|ZP_05675758.1| guanosine monophosphate reductase 2 [Enterococcus faecium Com12] gi|293377523|ref|ZP_06623719.1| GMP reductase [Enterococcus faecium PC4.1] gi|227179554|gb|EEI60526.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecium TX1330] gi|257832670|gb|EEV59091.1| guanosine monophosphate reductase 2 [Enterococcus faecium Com12] gi|292643892|gb|EFF62006.1| GMP reductase [Enterococcus faecium PC4.1] Length = 325 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIIDETIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D A F +++ LI+++ ++ + A L Sbjct: 59 NG-----YFYIMHRFDEVARIPF-IKKMKKRG-LITSISVGVKKEEYSFIE-KLAEESLN 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDI----------AHGHANSVIDMIQHIKKYLPETFVI--AGNVGTPEAVRELEN 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 159 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+R DI KS+ GA++ + S F + V Sbjct: 208 GIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|89067243|ref|ZP_01154756.1| glutamate synthase, large subunit [Oceanicola granulosus HTCC2516] gi|89046812|gb|EAR52866.1| glutamate synthase, large subunit [Oceanicola granulosus HTCC2516] Length = 1513 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1025 RCKVTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1080 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1081 LTEAHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1140 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + E Sbjct: 1141 QSNTCPVGVCTQDEKLREKFTGNADKVVNLITFYATEVREVLASIGARSLDE 1192 >gi|114320174|ref|YP_741857.1| inosine-5'-monophosphate dehydrogenase [Alkalilimnicola ehrlichii MLHE-1] gi|114226568|gb|ABI56367.1| inosine-5'-monophosphate dehydrogenase [Alkalilimnicola ehrlichii MLHE-1] Length = 488 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 23/143 (16%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +++ + D+ ++ G ++ ++G+ + G+ + Sbjct: 254 GVLNRVRWIKQHYPDLQVIG---GNIATAQAALDLKEAGVDAVKVGIGPGSICTT----- 305 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 V G+P T +S + IA GG+R D+ K++ GA Sbjct: 306 -------RVVAGVGVPQITAISNVAEALAGTDIPLIADGGVRFSGDMAKALAAGAYCV-- 356 Query: 287 ASPFLKPAMDSSDAVVAAIESLR 309 + + ++ +E + Sbjct: 357 ---MVGSLLAGTEEAPGEVELYQ 376 >gi|333030863|ref|ZP_08458924.1| 2-nitropropane dioxygenase [Bacteroides coprosuis DSM 18011] gi|332741460|gb|EGJ71942.1| 2-nitropropane dioxygenase [Bacteroides coprosuis DSM 18011] Length = 340 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 83/281 (29%), Gaps = 51/281 (18%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV-MFSDHNAIKSFELR 111 L P++ + M GG L A+GS + + Sbjct: 4 LNLQIPIIQAPMAGGIT------TPQLVSKVSNLG---ALGSYAAGYIKTPQMEEDIKEI 54 Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 Q H + NL + Y A+ L L P P + Sbjct: 55 QSLTHKPFMVNLFVPEK-YIVDPDAVQIAIKALDPIYKKFELTPQLPSNNPE--KDLKRF 111 Query: 172 SSKIALLSSAMDVPLLL-------KEV------------GCGLSSMDIELGLKSGIRYFD 212 + +I L + VP+ KEV S + K+GI Sbjct: 112 NQQIDKLI-ELRVPICSFVFGIPSKEVIQRLKDNDILTMATATSVEEALAIEKAGIDIVI 170 Query: 213 IAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 G GG +E + IP +L IA+GG+ Sbjct: 171 AQGIEAGGHRGGFLEPMQQ-------------IP-LTTLLPQVVKAVAIPVIAAGGIMTK 216 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 DI K+ LGA + + FL D S A+ A ES+ +E Sbjct: 217 PDIQKARELGAIAVQMGTAFL--LTDESGAIEAYKESIIQE 255 >gi|307282343|ref|ZP_07562551.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0860] gi|306503791|gb|EFM73017.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0860] Length = 322 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFARLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|254451111|ref|ZP_05064548.1| glutamate synthase, large subunit [Octadecabacter antarcticus 238] gi|198265517|gb|EDY89787.1| glutamate synthase, large subunit [Octadecabacter antarcticus 238] Length = 1512 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 49/170 (28%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + S + + G+ Sbjct: 1027 VTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASPASSI----KYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + GGLR G DI+ + +LGA G+ + L Sbjct: 1083 AHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSN 1142 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++D VV I E + +G + + E+ Sbjct: 1143 TCPVGVCTQDDALRDKFTGNADKVVNLITFYATEVREILAEIGARSMDEI 1192 >gi|209542512|ref|YP_002274741.1| glutamate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209530189|gb|ACI50126.1| Glutamate synthase (ferredoxin) [Gluconacetobacter diazotrophicus PAl 5] Length = 1513 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + +S + + G+ Sbjct: 1031 VTVKLVARSGIGTIAAGVAKAKADAILISGHSGGTGASPQSSV----KYAGLPWELGLAE 1086 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + M + + GGL+ G D++ + +LGA G+ + L Sbjct: 1087 AHQVLMLNRLRHRVKLRTDGGLKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1146 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + ++ + LG + E+ T L+R Sbjct: 1147 TCPVGVCTQDEALREKFEGTPEKVINLFSFIAEDVRNILASLGFSTLNEVIGRTDLLRQ 1205 >gi|162147895|ref|YP_001602356.1| glutamate synthase [NADPH] large chain [Gluconacetobacter diazotrophicus PAl 5] gi|161786472|emb|CAP56054.1| putative glutamate synthase [NADPH] large chain precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 1516 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + +S + + G+ Sbjct: 1034 VTVKLVARSGIGTIAAGVAKAKADAILISGHSGGTGASPQSSV----KYAGLPWELGLAE 1089 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + M + + GGL+ G D++ + +LGA G+ + L Sbjct: 1090 AHQVLMLNRLRHRVKLRTDGGLKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1149 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + + V+ + ++ + LG + E+ T L+R Sbjct: 1150 TCPVGVCTQDEALREKFEGTPEKVINLFSFIAEDVRNILASLGFSTLNEVIGRTDLLRQ 1208 >gi|110640141|ref|YP_680351.1| glutamate synthase (NADH) large subunit [Cytophaga hutchinsonii ATCC 33406] gi|110282822|gb|ABG61008.1| glutamate synthase (NADH) large subunit [Cytophaga hutchinsonii ATCC 33406] Length = 1512 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ +S + +K V K+ Sbjct: 988 HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNSNPKARVSVKLVSEAGVGTIAAGVSKAH 1047 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 IAG GGT S I S R + + G+ + + + G Sbjct: 1048 ADLVLIAGYDGGTGASPISSIRH-----AGLPWELGLAEAHQTLVKNKLRSRITVQSDGQ 1102 Query: 267 LRNGVDILKSIILGASLGGLASPF---------------------------LKPAMDSS- 298 +R G D++ + +LGA G+A+ L+ Sbjct: 1103 IRTGKDLVVAALLGAEEFGVATAALVSVGCIMMRKCHLNTCPVGVATQNKELRALFSGEP 1162 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV L +E M LG + V E+ Sbjct: 1163 EHVVNMFTFLAEEMREIMAELGYRTVDEM 1191 >gi|219852650|ref|YP_002467082.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris E1-9c] gi|219546909|gb|ACL17359.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris E1-9c] Length = 490 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 31/184 (16%) Query: 111 RQYAPHTVL--ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 ++ P + + NL F ++A A+ + AD L + Sbjct: 208 KRQYPRAIRDDLGNLRVAAAVGPFDFERA-MALDGVHADALIV--------------DCA 252 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + K+ + + + +++ + L + + G+ + Sbjct: 253 HGHNMKVVQAVRDIKASATAEVIAGNIATAEAATALSDTVDGLKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + GIP ++ +E IA GG+R D+ K+I GA + Sbjct: 308 -------RIVAGVGIPQITAIAEVAGVASEAGVPVIADGGVRFSGDVAKAIAAGADSVMM 360 Query: 287 ASPF 290 S F Sbjct: 361 GSLF 364 >gi|149181273|ref|ZP_01859771.1| glutamate synthase, large subunit, putative [Bacillus sp. SG-1] gi|148850998|gb|EDL65150.1| glutamate synthase, large subunit, putative [Bacillus sp. SG-1] Length = 1495 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 33/267 (12%) Query: 39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTK----------V 88 I +VD SV G+ S P I+SM+ G+ I R A AA++ + Sbjct: 830 IDPSKVDISV---GEH-SLPFAIASMSFGSQNEIAF--RAYAEAADRLNMVSLNGEGGEI 883 Query: 89 AMAVGSQRVMFSDHNAIKSFELRQY--APHTVLISNLGAVQLNYDFG-VQKAHQAVHVLG 145 +G A F + +L +G + G + + + Sbjct: 884 KDMIGKYPKTRGQQVASGRFGVNAELLNSSNLLEIKIGQGAKPGEGGHLPGSKVTAKIAQ 943 Query: 146 ADGLFLHLNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 A + ++I P+ N + DL+ I L +A D + +V + I + Sbjct: 944 ARNATI----GSDLISPSNNHDIYSIEDLAQMIHELKTANDQAKVAVKVPVVPNIGTIAV 999 Query: 203 -GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 K+G ++G GGT +RI + + + + + G+ + + + + Sbjct: 1000 GIAKAGADIVTLSGFDGGTGAARIHALQHVGLPV-----EIGVKAAHNALLEAGLRDTVE 1054 Query: 261 FIASGGLRNGVDILKSIILGASLGGLA 287 A GG+++ D++K ++LGA+ G Sbjct: 1055 IWADGGIKSMQDVMKVMLLGANRIGFG 1081 >gi|306833014|ref|ZP_07466146.1| dihydroorotate dehydrogenase A [Streptococcus bovis ATCC 700338] gi|304424913|gb|EFM28047.1| dihydroorotate dehydrogenase A [Streptococcus bovis ATCC 700338] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 9/87 (10%) Query: 244 PTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 PT L+ A + Q I +GG++ G D + I+ GAS+ L L + + Sbjct: 225 PTALANVHAFYQRLNPSIQIIGTGGVKTGRDAFEHILCGASMVQL-GTILH--QEGPE-- 279 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELY 328 E + E M G + +++ Sbjct: 280 --VFERITNELKAIMEEKGYENLEDFR 304 >gi|319957186|ref|YP_004168449.1| glutamate synthase (nadph) large subunit [Nitratifractor salsuginis DSM 16511] gi|319419590|gb|ADV46700.1| glutamate synthase (NADPH) large subunit [Nitratifractor salsuginis DSM 16511] Length = 1475 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 34/182 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 D + +K V K+ I+G GGT + I + Sbjct: 998 DARIAVKLVSTAGVGTIAAGVAKAYADKIIISGADGGTGAAPI-----GSIKFAGNPWEL 1052 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL---------- 291 G+ + A + GGL+ G+D++K+ I GA + L Sbjct: 1053 GLVEAHNALKANNLRGFVELETDGGLKTGMDVIKAAIFGAESYAFGTGALTVIGCKILRI 1112 Query: 292 ------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + S + V+ L ++ + LG K + E+ T L Sbjct: 1113 CHLNRCTVGIATQEKKLREHYEGSVERVINYFTLLAEDVREILASLGYKSLGEIIGRTDL 1172 Query: 334 IR 335 ++ Sbjct: 1173 LK 1174 >gi|224372738|ref|YP_002607110.1| inosine 5'-monophosphate dehydrogenase [Nautilia profundicola AmH] gi|223588344|gb|ACM92080.1| inosine-5'-monophosphate dehydrogenase [Nautilia profundicola AmH] Length = 482 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 84/265 (31%), Gaps = 43/265 (16%) Query: 48 VEFLGKKLSFPL-LISSMTGGNNKMIERI-----NRNLAIAAEKTKVAMAVGSQRVMFSD 101 K L P+ LI++ G + + E I L I + + + D Sbjct: 144 TTRFVKDLMTPMPLITAKEGISLEEAEDILHQHKIEKLPIIDDNGYL-----KGLITIKD 198 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 K++ L A + GV+ +A ++GA + ++ Q Sbjct: 199 IQKKKTYPNANKDKFGRLRV---AAAVGVGNGVE---RAAALVGAGVDVIVVDSAHGHSQ 252 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSW 221 + + + DV ++ V ++ +++G + G+ Sbjct: 253 --------GILDVVKAIKERFDVDVVGGNVA---TAEATRALIEAGADAVKVGIGPGSIC 301 Query: 222 SRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIIL 279 + + G+P +++ + IA GG++ DI K++ + Sbjct: 302 TT------------RIVAGVGVPQISAIDECAREGAKHGVPIIADGGIKYSGDIAKALAV 349 Query: 280 GASLGGLASPFLKPAMDSSDAVVAA 304 GAS + L +S + Sbjct: 350 GASSV-MIGSLLAGTEESPGETIMY 373 >gi|170692167|ref|ZP_02883330.1| inosine-5'-monophosphate dehydrogenase [Burkholderia graminis C4D1M] gi|170142597|gb|EDT10762.1| inosine-5'-monophosphate dehydrogenase [Burkholderia graminis C4D1M] Length = 486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 76/246 (30%), Gaps = 44/246 (17%) Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + GSQ + + ++ FE R P +++ V + + +A +H Sbjct: 119 GFPVVEGSQLIGIVTNRDLR-FEERLDEPVRSIMTPRERLVTVKEGTSLAEAKALMHSHR 177 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IELGL 204 + + + +N E+ + + VG G + + +EL + Sbjct: 178 LERVLV-INDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGADNEERVELLV 236 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDI------------------------------ 234 ++G+ + G S +E R ++ + Sbjct: 237 QAGVDVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALVEYGADGVKVG 296 Query: 235 --------GIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLG 284 + G+P ++ IA GG+R D+ K++ GA+ Sbjct: 297 IGPGSICTTRIVAGVGVPQVTAIANVSEALKGTGVPVIADGGVRFSGDVSKALAAGANAV 356 Query: 285 GLASPF 290 + S F Sbjct: 357 MMGSMF 362 >gi|304317533|ref|YP_003852678.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779035|gb|ADL69594.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 484 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 75/237 (31%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 +D+ ++ L +A +V +++ + G S +E IAG + + E Sbjct: 227 SDVMERVEALVNA-NVDVIVIDTAHGHSVGVLNTVEKIKNRFPDVQIIAG----NVATAE 281 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMARPYCNE--AQFIASGGLR 268 + RDL G+P ++ ++ IA GG++ Sbjct: 282 ATRDLIERGADCVKVGIGPGSICTTRVVAGIGVPQITAIFDCAEEADKYGIPVIADGGIK 341 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 DI+K+I GAS + S F Sbjct: 342 YSGDIVKAIAAGASTVMIGSLFAGTEESPGEVEIYQGRSYKVYRGMGSISAMKSGSSDRY 401 Query: 292 ------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + + M G ++EL T I+ Sbjct: 402 FQEGMKKLVPEGVEGRVPYKGPLKDTVYQMIGGLRAGMGYCGVHNIEELRTKTKFIK 458 >gi|328472022|gb|EGF42899.1| glutamate synthase subunit alpha [Vibrio parahaemolyticus 10329] Length = 1487 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 997 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 T +L +A ++ + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1053 TQQAL-VANGLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A + V+ L E + LG +++ +L T L+ Sbjct: 1112 NNCATGVATQDETLRKEYFKGLPEMVMNYFTGLADEVRELLAELGVEKLTDLIGRTDLLE 1171 >gi|262370665|ref|ZP_06063990.1| glutamate synthase subunit alpha [Acinetobacter johnsonii SH046] gi|262314465|gb|EEY95507.1| glutamate synthase subunit alpha [Acinetobacter johnsonii SH046] Length = 1493 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVVKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + ++ + +E + LG +++L T L+ Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFTFIAEETREWLAALGVSSLKDLIGRTDLLE 1181 >gi|260902196|ref|ZP_05910591.1| glutamate synthase family protein [Vibrio parahaemolyticus AQ4037] gi|308108480|gb|EFO46020.1| glutamate synthase family protein [Vibrio parahaemolyticus AQ4037] Length = 1487 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 997 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 T +L +A ++ + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1053 TQQAL-VANGLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A + V+ L E + LG +++ +L T L+ Sbjct: 1112 NNCATGVATQDETLRKEYFKGLPEMVMNYFTGLADEVRELLAELGVEKLTDLIGRTDLLE 1171 >gi|268316879|ref|YP_003290598.1| inosine-5'-monophosphate dehydrogenase [Rhodothermus marinus DSM 4252] gi|262334413|gb|ACY48210.1| inosine-5'-monophosphate dehydrogenase [Rhodothermus marinus DSM 4252] Length = 504 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 66/240 (27%), Gaps = 78/240 (32%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIE 225 AD+ ++A L A V + + G S +EL +AG + + E Sbjct: 242 ADVLDRVAALVEA-GVDFVTVDTAHGHSEGVLRTVELIKTHFENLDVVAG----NVATAE 296 Query: 226 SHRDLESDIGIVF---------------QDWGIP--TPLSLEMARPYCNEAQFIASGGLR 268 RDL + G+P T + + A IA GG++ Sbjct: 297 GTRDLIAAGADAVKVGIGPGSICTTRVVAGVGVPQLTAVMICAAEARPRGIPIIADGGIK 356 Query: 269 NGVDILKSIILGASLGGLASPF-------------------------------------- 290 + DI K++ GAS + S F Sbjct: 357 HTGDIPKALAAGASSVMIGSLFAAVEESPGETVIYEGRKYKSYRGMGSVGAMAAGSKDRY 416 Query: 291 --------LKPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + + + + +M G + ELY +R Sbjct: 417 FQDAEDDLAKLVPEGIEGRVPYSGRLSEVVYQMIGGLRAAMGYCGCATIDELYEKARFVR 476 >gi|170780974|ref|YP_001709306.1| inosine 5-monophosphate dehydrogenase [Clavibacter michiganensis subsp. sepedonicus] gi|169155542|emb|CAQ00654.1| putative inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis subsp. sepedonicus] Length = 372 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 53/202 (26%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S S + + Sbjct: 178 NLKKFIYELDVPVI---VGGAATYTAALHLMRTGAAGVLV-GFGGGAASTTRSTLGIHAP 233 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + IA GGL + DI+K+I +GA L Sbjct: 234 MATALSD--------VAGARRDYMDESGGRYVHVIADGGLGSSGDIVKAIAVGADAVMLG 285 Query: 288 SPF-----------------------------------LKPAMDSSDAVVAAIESLRKEF 312 S L+ + +L Sbjct: 286 STLARATDAPGQGFHWGAEAHHSELPRGHRVRVDQVAPLEQILYGPSTTADGSANLVGAL 345 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 +M G ++E ++ Sbjct: 346 RRAMATTGYSDLKEFQRVEVVV 367 >gi|262377053|ref|ZP_06070279.1| glutamate synthase large subunit [Acinetobacter lwoffii SH145] gi|262308091|gb|EEY89228.1| glutamate synthase large subunit [Acinetobacter lwoffii SH145] Length = 1493 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVVKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + ++ + +E + LG +++L T L+ Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFTFIAEETREWLAALGVSSLKDLIGRTDLLE 1181 >gi|227530640|ref|ZP_03960689.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC 49540] gi|227349421|gb|EEJ39712.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC 49540] Length = 305 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 115/322 (35%), Gaps = 52/322 (16%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIER----INRNLAIAAEKTKVAMAVGS-- 94 +V +V G K+ P++ +S T G + + +NR AI + T + G+ Sbjct: 1 MTDVRLAVNLPGLKMKNPVMPASGTFGFGDVPQARKYDLNRLGAIVIKTTTLQARTGNPQ 60 Query: 95 -----------QRVMFSDHNA-----IKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAH 138 V ++ K L+ P L++++G + V + Sbjct: 61 PQIAVLNDGVLNSVGLTNPGVNVVAGEKIPHLKHQYPDLPLVASIGGASVEDYVMVTERL 120 Query: 139 QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM--DVPLLLKEVGCGLS 196 A ++ A L + ++ G ++ K+ A DVP+ +K Sbjct: 121 AATGLVDALELNISCPNVKHGGMAFGTD--PQVAEKLTKAVKAASGDVPVYVKLTPNVTD 178 Query: 197 SMDIELGLKSGIRYFDIAGRGGTSWSR--------IESHRDLESDIGIVFQDWGIPTPLS 248 ++I +++G G G S +++ + + +I I PL+ Sbjct: 179 IVEIAQAVEAG-------GADGLSMINTLLGMKINLKTRKPVLGNIMGGLSGTAIK-PLA 230 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 + M + I GG+ + D+++ + GAS + S A+ A+ Sbjct: 231 IRMIYQVSHAVNIPIIGEGGISSAEDVIEFFLAGASAVQVGSAHFHDAL--------AMP 282 Query: 307 SLRKEFIVSMFLLGTKRVQELY 328 + ++ +M +G + EL Sbjct: 283 HIIEQLPQAMARVGIGSLAELR 304 >gi|75909254|ref|YP_323550.1| dihydroorotate dehydrogenase 2 [Anabaena variabilis ATCC 29413] gi|75702979|gb|ABA22655.1| Dihydroorotate dehydrogenase [Anabaena variabilis ATCC 29413] Length = 343 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 105/310 (33%), Gaps = 64/310 (20%) Query: 45 DPSVEFLGKKLSFPLL--ISSMTG-------------GNNKMIERINRNLAIAAEKTK-- 87 D + +LG +L PL+ S M+G G + L++ + + Sbjct: 2 DLTTNYLGLRLRSPLVPSASPMSGEIDNILWMEDAGAGAVVLPSLFEEQLSLESYELHHH 61 Query: 88 VAMAVGSQRVMFSDHNAIKSFELR-----------QYAPHTVLISNLGAVQLNYDFGVQK 136 + S + + F L + +I++L L+ G + Sbjct: 62 LTYGTESFPESLTYFPEHQDFRLGPEEYLNLIQKTREKVKIPIIASLNGSSLD---GWTE 118 Query: 137 AHQAVHVLGADGLFL-----HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEV 191 + + GA L L H +P E+ + + ++ +++ +P+ +K Sbjct: 119 YARMIEQAGATALELNTYSVHTDP--ELTSEQIE---QSYINMLKVVKASVQIPVAIKLS 173 Query: 192 GCGLS-SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + + + +G + R + DI + + + TP Sbjct: 174 PYFTNMANMAKRLDDAGADALVLFN------------RFYQPDINLETLEVEPHVLLSTP 221 Query: 247 LSLEMARPY------CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 ++ + + A A+ G+ NG D+LK ++ GA++ L S L+ ++ Sbjct: 222 QAMRLPLRWIAILYGRINAHLAATSGIHNGHDVLKMLMAGANITMLCSVLLRHGIEHIKY 281 Query: 301 VVAAIESLRK 310 + I + Sbjct: 282 IEQEIRQWME 291 >gi|7546367|pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205) From Streptococcus Pyogenes Length = 491 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + A + KIA + + L+ G ++ +G+ + G+ + Sbjct: 257 HSAGVLRKIAEIRAHFPNRTLI--AGNIATAEGARALYDAGVDVVKVGIGPGSICTT--- 311 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 V G+P ++ A E IA GG++ DI+K++ G + Sbjct: 312 ---------RVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAV 362 Query: 285 GLASPF 290 L S F Sbjct: 363 XLGSXF 368 >gi|182625345|ref|ZP_02953119.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens D str. JGS1721] gi|177909503|gb|EDT71950.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens D str. JGS1721] Length = 355 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 33/246 (13%) Query: 78 NLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 NLA A K + + G+Q + + L +NL A++ + +K Sbjct: 30 NLASAVTKAGGIGIISGAQPGYLE-----------EDFKNNPLEANLRALKKHIRIAKEK 78 Query: 137 AHQAVH----VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL--LLKE 190 + + ++ + H+ + + + A L S + + +V + ++ Sbjct: 79 SQNGIIGVNLMVAMNNYAEHVKAAIDA-GVDLIISGAGLPSHLPKFTKGSNVKIAPIVSS 137 Query: 191 VGCGLSSMDIELG----LKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + I K I G GG ES D D I Sbjct: 138 LKAA---KVILKLWDRHHKVSPDMIVIEGPKAGGHLGFTKESLEDESKKFDSTILD--II 192 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 S+ Y + I +GG+ +G DI K + LGAS +A+ F+ A DA + Sbjct: 193 KETSIYE-DKYEKKIPIIVAGGVFDGKDIAKYLKLGASGVQMATRFV--ATYECDANIKF 249 Query: 305 IESLRK 310 E+ Sbjct: 250 KEAYIN 255 >gi|126736165|ref|ZP_01751908.1| Glutamate synthase (ferredoxin) [Roseobacter sp. CCS2] gi|126714331|gb|EBA11199.1| Glutamate synthase (ferredoxin) [Roseobacter sp. CCS2] Length = 1510 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 47/172 (27%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVSSSGVGTIAAGVAKAKADVILISGHNGGTGASP----ATSIKYAGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA-------- 294 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRERITLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 295 --------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 ++D VV I E + +G + + + Sbjct: 1138 QSNTCPVGVCTQDEALRDKFTGNADKVVNLITFYATEVREILASIGARSLDD 1189 >gi|291483098|dbj|BAI84173.1| hypothetical protein BSNT_01129 [Bacillus subtilis subsp. natto BEST195] Length = 525 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 20/193 (10%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVH---VLGADGLFLHLNPLQEIIQPNGNTNF 168 + I + A +L G + V V ++ P + I PN F Sbjct: 248 EEFKRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDSPNRFYEF 307 Query: 169 ADLSSKIALLSSAMDV---PLLLKEVGCGLSSMDIELGLKS------GIRYFDIAGR-GG 218 + + + DV P+ +K V ++ + I G GG Sbjct: 308 SKPPEMLDFIEKLRDVGQKPVGIKLVAG--HPEELHELFSHMQKSGKHPDFITIDGSEGG 365 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 T S E + I P +L + ++ + ASG L I ++ Sbjct: 366 TGASFYELADTVGLPIMTAL-----PIVDTLLKQYGFRSQLKIFASGKLLTPDKIAVALA 420 Query: 279 LGASLGGLASPFL 291 LGA +A + Sbjct: 421 LGADFVNIARGMM 433 >gi|253686704|ref|YP_003015894.1| Glutamate synthase (ferredoxin) [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753282|gb|ACT11358.1| Glutamate synthase (ferredoxin) [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 1486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 ++ ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVSNGLRHKIRLQVDGGLKTGLDIVKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V + + E V M LG R+ +L T L+ Sbjct: 1111 NNCATGVATQDEKLRRDHYHGLPERVTNYFQFIAHETRVLMAELGVSRLVDLIGRTDLL 1169 >gi|171911344|ref|ZP_02926814.1| inosine-5'-monophosphate dehydrogenase [Verrucomicrobium spinosum DSM 4136] Length = 485 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 31/197 (15%) Query: 112 QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADL 171 A GA + V +A A+ GAD +F+ + + + Sbjct: 208 SAAKDGQGRLRAGAAVGVSEDCVDRAL-AMQAAGADAIFI----------DAATGHTSRV 256 Query: 172 SSKIALLSSAMD--VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I+ L A+ P++ G ++ + +G + G+ + Sbjct: 257 MNVISRLREALGDGTPVVA---GNVVTKDGAKDLCDAGASAIKVGVGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P +++ C I+ GG+R D++K+I GA L + Sbjct: 308 ------RIISGVGMPQFSAVQEVAEICRPRGVTVISDGGIRFSGDVVKAIAAGADLV-ML 360 Query: 288 SPFLKPAMDSSDAVVAA 304 L +S A+V Sbjct: 361 GSLLAGTAESPGAMVKW 377 >gi|119630786|gb|EAX10381.1| hydroxyacid oxidase (glycolate oxidase) 1, isoform CRA_b [Homo sapiens] Length = 241 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 18/145 (12%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F W L R L + E D S LG+++S P+ + + + + Sbjct: 31 ANDEETLADNIAAFSRWKLYPRML--RNVAETDLSTSVLGQRVSMPICVGATA---MQRM 85 Query: 73 ERINRNLA--IAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLN 129 ++ LA A + M + S E+ + P + L + + Sbjct: 86 AHVDGELATVRACQSLGTGMMLSSWATSSIE--------EVAEAGPEALRWLQL-YIYKD 136 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLN 154 + + QA +G +F+ ++ Sbjct: 137 REVTKKLVRQA-EKMGYKAIFVTVD 160 >gi|187478067|ref|YP_786091.1| inosine-5'-monophosphate dehydrogenase [Bordetella avium 197N] gi|115422653|emb|CAJ49179.1| inosine-5'-monophosphate dehydrogenase [Bordetella avium 197N] Length = 486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 65/225 (28%), Gaps = 43/225 (19%) Query: 108 FELRQYAP-HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 FE R P V+ V + + +A +H + + + +N E+ Sbjct: 139 FEDRLDQPLRNVMTPRERLVTMTEGATLDEAQTLMHKHRLERVLI-VNDAFELRGLATVK 197 Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + A+ + + + IE + +G+ + G S IE Sbjct: 198 DIVKNTEHPYACKDALGQLRVGAAVGVGAGTEERIEKLVAAGVDVIIVDTAHGHSAGVIE 257 Query: 226 SHRDLESDI--------------------------------------GIVFQDWGIP--T 245 R ++ + + G+P T Sbjct: 258 RVRWVKQNYPKVDVIGGNIATAAAARALVEAGADGVKVGIGPGSICTTRIVAGVGVPQVT 317 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +S IA GG+R D+ K++ GAS + F Sbjct: 318 AISDVAQALEGTGVPLIADGGIRYSGDVAKALAAGASTCMMGGMF 362 >gi|194334240|ref|YP_002016100.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii DSM 271] gi|194312058|gb|ACF46453.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii DSM 271] Length = 496 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 66/242 (27%), Gaps = 80/242 (33%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMD---IELGLKSGIRYFDIAGRGGTSWSRIE 225 ++ +++ L A V ++ + G S ++ + +AG + + E Sbjct: 234 SNTLTRVQALVDA-GVDVIAVDTAHGHSKAVGDMVKTIKQHYPDLQIVAG----NVATPE 288 Query: 226 SHRDLESDIGIVF---------------QDWGIPTPLSLEMA--RPYCNEAQFIASGGLR 268 + RDL + G+P ++ IA GG++ Sbjct: 289 AVRDLIAAGADAVKVGIGPGSICTTRIVAGVGMPQLTAIMNCSEEAAKTGTPIIADGGIK 348 Query: 269 NGVDILKSIILGASLGGLASPFL------------------------------------- 291 D+ K+I GA + S F Sbjct: 349 YSGDLAKAIAAGADSVMIGSIFAGTDESPGETILYEGRRFKAYRGMGSLGAMSEPEGSSD 408 Query: 292 -----------KPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 K + + + I L SM G K ++E+ NT Sbjct: 409 RYFQDASSESKKYVPEGIEGRIPAKGKLEEVIYQLIGGLKSSMGYCGVKNIEEMKHNTCF 468 Query: 334 IR 335 +R Sbjct: 469 VR 470 >gi|329769902|ref|ZP_08261301.1| dihydroorotate dehydrogenase A [Gemella sanguinis M325] gi|328837956|gb|EGF87580.1| dihydroorotate dehydrogenase A [Gemella sanguinis M325] Length = 310 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 98/320 (30%), Gaps = 41/320 (12%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI 105 FL +LS PL+ ++ +G + E ++ AA A R + Sbjct: 2 LKTNFLDVELSNPLM-NA-SGVHCMTTEELDELAGSAAGAFVTKTATRDYREGNPEPRYY 59 Query: 106 KSF-------------------ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + + + + L ++Y+ + + Sbjct: 60 DTALGSINSMGLPNNGLDYYLDYVIKRQKEGAKLQFLSVTGMSYEENISLLKKIQESEYE 119 Query: 147 DGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELG 203 +L+ +P +F ++ + + P+ +K + + Sbjct: 120 GVTEFNLSCPNVPGKPQIAYDFELTEKLLSEVFTFFTKPIGVKLPPYFDIAHFDEMARIL 179 Query: 204 LKSGIRYFDIAGRGG----TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY---- 255 K + Y + G + + + G + ++ PT L R + Sbjct: 180 NKFPLTYVNSVNSVGNGLYIDLDKEQVVIKPKGGFGGLGGEYIKPTA--LANVRAFRERL 237 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 + I +GG+ NG D+ + I+ GA L + + K + V A L +E Sbjct: 238 NPSIKIIGTGGVINGRDVFEHILCGADLVQVGTTLHK------EGV-AVFSRLAEELQEV 290 Query: 316 MFLLGTKRVQELYLNTALIR 335 M G K + + +I Sbjct: 291 MKEKGYKSLDDFRGKLKVIE 310 >gi|325977782|ref|YP_004287498.1| dihydroorotate dehydrogenase 1A [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177710|emb|CBZ47754.1| dihydroorotate dehydrogenase 1A [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 17/202 (8%) Query: 136 KAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 +AV GL L+L+ +P +F + + + + PL +K Sbjct: 111 TILKAVQDSDYQGLVELNLSCPNVPGKPQIAYDFETTETLLRDIFTYFTKPLGVKLPPYF 170 Query: 195 LSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIVFQDWGIPTPLS 248 + + + + + + G + IE ++ G + D+ PT L+ Sbjct: 171 DIAHFDRAAAIFNQFPLTFVNCINSIG-NGLIIEDETVLIKPKNGFGGIGGDYVKPTALA 229 Query: 249 LEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 A + Q I +GG++ G D + I+ GAS+ L L + A E Sbjct: 230 NVHAFYQRLNPSIQIIGTGGVKTGRDAFEHILCGASMVQL-GTILH--QEGP----AVFE 282 Query: 307 SLRKEFIVSMFLLGTKRVQELY 328 + E M G K +++ Sbjct: 283 RIMNELKAIMEEKGYKSLEDFR 304 >gi|311277816|ref|YP_003940047.1| Glutamate synthase (ferredoxin) [Enterobacter cloacae SCF1] gi|308747011|gb|ADO46763.1| Glutamate synthase (ferredoxin) [Enterobacter cloacae SCF1] Length = 1486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1111 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIAREVRELMAQLGVKRLVDLIGRTDLLK 1170 >gi|317051163|ref|YP_004112279.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum S5] gi|316946247|gb|ADU65723.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum S5] Length = 489 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 31/188 (16%) Query: 109 ELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQP--NG 164 E RQ P+ L V G +A ++ A + ++ Q Sbjct: 202 EKRQKYPNACKDEFGRLR-VGAAVGTGADTIERAAALVKAGVDVIVIDTAHGHSQKVLET 260 Query: 165 NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRI 224 + + ++ + + + +++G+ + G+ + Sbjct: 261 VREVRTIYPNLEIIGGNIA------------TKEAAKALIEAGVNAVKVGIGPGSICTT- 307 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGAS 282 + G+P ++ YC+ IA GG++ D++K+I GA+ Sbjct: 308 -----------RIVAGVGVPQITAITEVARYCDPLGIPVIADGGIKYSGDVVKAIAAGAN 356 Query: 283 LGGLASPF 290 + S F Sbjct: 357 CVMIGSLF 364 >gi|226941544|ref|YP_002796618.1| GuaB [Laribacter hongkongensis HLHK9] gi|226716471|gb|ACO75609.1| GuaB [Laribacter hongkongensis HLHK9] Length = 486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 68/254 (26%) Query: 108 FELRQYAPHTVLIS-NLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT 166 FE R P +++ V + +++A + +H + + + +N E+ Sbjct: 139 FENRLDTPVRDIMTPRERLVTVREGASLEEARELMHAHKLERVLV-VNDAFEL------- 190 Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGL-----------SSMDIELGLKSGIRYFDIAG 215 + + + PL K+ L + + L +++G+ + Sbjct: 191 ---KGLITVKDIIKTSEKPLACKDEQGRLRVGAAVGVGEGTDERVTLLVEAGVDVIVVDT 247 Query: 216 RGGTSWSRIESHRDLESDIGI--------------------------------------V 237 G S ++ R ++ + + Sbjct: 248 AHGHSQGVLDRVRWVKQNFPQVEVIGGNIATAAAALALVEAGADAVKVGIGPGSICTTRI 307 Query: 238 FQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAM 295 G+P T +S IA GG+R DI K+I GA++ L + Sbjct: 308 VAGVGVPQLTAVSNVSEALKSTGVPLIADGGIRFSGDISKAIASGANVV-----MLGGLL 362 Query: 296 DSSDAVVAAIESLR 309 ++ +E + Sbjct: 363 AGTEEAPGEVELYQ 376 >gi|188584671|ref|YP_001916216.1| inosine-5'-monophosphate dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349358|gb|ACB83628.1| inosine-5'-monophosphate dehydrogenase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 485 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 113/362 (31%), Gaps = 107/362 (29%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIA-A 83 FDD L+ + +I ++D K +L+ PL M+ G + + E LA+A A Sbjct: 14 FDDVLLVP-SKSQIIPKDIDIQTRLTNKIRLNIPL----MSAGMDTVTE---ARLAVAMA 65 Query: 84 EKTKVA-----MAVGSQRVMF------SDHNAIKSFELRQYAP----------------- 115 + + M++ Q F L Q Sbjct: 66 REGGIGIIHKNMSIDKQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYRISGVP 125 Query: 116 ---HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLF----LHLNPLQEIIQPN----- 163 LI + L ++ + + V + ++ + + ++ Q+I+Q N Sbjct: 126 ITESGKLIGIITNRDLRFETDFNRPIKEV-MTDSNLITASEGISMSEAQKILQENKVEKL 184 Query: 164 ----GNTNFADLSSKIALLSSAMDVPLLLKE----------VGCGLS-SMDIELGLKSGI 208 N L + I + ++ P K+ VG G + +++ + Sbjct: 185 PLTDDEGNLKGLIT-IKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVEAKV 243 Query: 209 RYFDIAGRGGTSWSRIESHR-------------------DLESDIGIVFQD--------- 240 I G S + I++ R + D+ D Sbjct: 244 DVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGVGPG 303 Query: 241 ----------WGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLAS 288 G+P ++ E I+ GG++ DI K++ +GA + + S Sbjct: 304 SICTTRIVCGVGVPQITAVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVMIGS 363 Query: 289 PF 290 F Sbjct: 364 LF 365 >gi|328945856|gb|EGG40007.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK1087] Length = 312 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GA++ + + K + V A E + +E M G + +++ Sbjct: 257 FEHILCGANMVQVGTTLHK------EGVAA-FERITEELKAIMEEKGYESLEDFR 304 >gi|253751600|ref|YP_003024741.1| GMP reductase [Streptococcus suis SC84] gi|253753502|ref|YP_003026643.1| GMP reductase [Streptococcus suis P1/7] gi|253755673|ref|YP_003028813.1| GMP reductase [Streptococcus suis BM407] gi|330832748|ref|YP_004401573.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus suis ST3] gi|158514185|sp|A4W0T4|GUAC_STRS2 RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|251815889|emb|CAZ51502.1| GMP reductase [Streptococcus suis SC84] gi|251818137|emb|CAZ55932.1| GMP reductase [Streptococcus suis BM407] gi|251819748|emb|CAR45621.1| GMP reductase [Streptococcus suis P1/7] gi|319758037|gb|ADV69979.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus suis JS14] gi|329306971|gb|AEB81387.1| guanosine 5'-monophosphate oxidoreductase [Streptococcus suis ST3] Length = 327 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 75/265 (28%), Gaps = 40/265 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ ++A K Sbjct: 10 YEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV-------PANMQTIIDEDVAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + Y+F A + Sbjct: 63 DG-----YFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEYEFVTSLKADAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + I + + ++ G + + Sbjct: 118 IDIAHGH---------------AESVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KSI GAS+ + S F Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLF 234 >gi|153834489|ref|ZP_01987156.1| glutamate synthase [NADPH] large chain [Vibrio harveyi HY01] gi|148869125|gb|EDL68161.1| glutamate synthase [NADPH] large chain [Vibrio harveyi HY01] Length = 1487 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + S + + Sbjct: 997 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAE---- 1052 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGAS--------LGGLASPFLKP--- 293 T +L +A ++ + GGL+ G+D++K+ ILGA + + FL+ Sbjct: 1053 TQQAL-VANGLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHL 1111 Query: 294 -------AMDSS-----------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A + V+ L E + LG +++ +L T L+ Sbjct: 1112 NNCATGVATQDETLRKEYFKGLPEMVMNYFTGLADEVRGLLAELGVEKLTDLIGRTDLLE 1171 >gi|12056413|emb|CAC21227.1| glutamate synthase large subunit [Thermotoga thermarum] Length = 304 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 21/140 (15%) Query: 153 LNPLQEIIQPNGNTNF---ADLSSKIALLSSAMDV--PLLLKEVGCGLSSMDIELGLKSG 207 + P + I P + + DL+ I L A D P+ +K + ++G Sbjct: 175 IPPGSDAISPAPHHDIYSIEDLAQLIYSLKEATDYQKPVGVKIAAVNNVAAIASGIARAG 234 Query: 208 IRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQF 261 Y I G G + + + RD + GIP ++ + Sbjct: 235 ADYIAIDGFRGGTGAAPKRIRD----------NVGIPIEFAIAAVDARLRSEGIRHTISL 284 Query: 262 IASGGLRNGVDILKSIILGA 281 +A+G +RN DI+K+I LGA Sbjct: 285 VAAGSIRNSADIVKAIALGA 304 >gi|304413363|ref|ZP_07394836.1| IMP dehydrogenase/GMP reductase [Candidatus Regiella insecticola LSR1] gi|304284206|gb|EFL92599.1| IMP dehydrogenase/GMP reductase [Candidatus Regiella insecticola LSR1] Length = 489 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 62/220 (28%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + D+ ++ V G +M + +G+ + G+ + Sbjct: 258 GVLRRIRDTRAKYPDLQIIGGNVATGKGAMA---LVNAGVNAVKVGIGPGSICTTRIVTG 314 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + +F T +L+ IA GG+R DI K+I GAS + Sbjct: 315 VGVPQLTAIFD-----TVEALK-----GTNIPIIADGGIRFSGDIAKAIAAGASCV-MVG 363 Query: 289 PFL----------------------------------------------KPAMDSSDAVV 302 L K + + V Sbjct: 364 SMLAGTEESPGEIEFYQGRSFKSYRGMGSLDAMSRGSSDRYFQTDNAADKLVPEGIEGRV 423 Query: 303 AA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 A ++ + + M L G + EL NT +R Sbjct: 424 AYKGLLKEIVHQQMGGLRSCMGLTGCSTIDELRTNTEFVR 463 >gi|302666288|ref|XP_003024745.1| hypothetical protein TRV_01094 [Trichophyton verrucosum HKI 0517] gi|291188814|gb|EFE44134.1| hypothetical protein TRV_01094 [Trichophyton verrucosum HKI 0517] Length = 2128 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI + +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYVANELRAIMAKLGFRSVNEMVGRAELLK 1250 >gi|158514186|sp|A4VUJ2|GUAC_STRSY RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase Length = 327 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 75/265 (28%), Gaps = 40/265 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ ++A K Sbjct: 10 YEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV-------PANMQTIIDEDVAEMLAK 62 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 + D F R + + ++G + Y+F A + Sbjct: 63 DG-----YFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEYEFVTSLKADAPEFIT 117 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D H + I + + ++ G + + Sbjct: 118 IDIAHGH---------------AESVIKMIQHIKKELPETFVI--AGNVGTPEAVRELEN 160 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L + IA G Sbjct: 161 AGADATKVGIGPGKVCIT-------KVKTGFGTGGWQL---AALRWCAKAARK-PIIADG 209 Query: 266 GLRNGVDILKSIILGASLGGLASPF 290 G+R DI KSI GAS+ + S F Sbjct: 210 GIRTHGDIAKSIRFGASMVMIGSLF 234 >gi|71027189|ref|XP_763238.1| inosine-5'-monophosphate dehydrogenase [Theileria parva strain Muguga] gi|68350191|gb|EAN30955.1| Inosine-5'-monophosphate dehydrogenase, putative [Theileria parva] Length = 503 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 43/193 (22%) Query: 105 IKSFELRQYAPHTVLISN----LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 F + P+ N +GA G+ A + + A L ++ Q Sbjct: 208 RSDFYKNKLYPNASKDDNKQLLVGAAISTRGNGLDTAKKLID---AKVDILVVDSSQ--- 261 Query: 161 QPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT 219 GN+ F I L S D ++ G +++ + L++G + G G Sbjct: 262 ---GNSVFQ--IDLIKQLKSVYPDFQVMA---GNVVTAQQAKNLLEAGCDSIKV-GMGIG 312 Query: 220 SWSRIESHRDLESDIG--------IVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 S ++ + F+ W N IA GG+++ Sbjct: 313 SICTTQNICGVGRGQASAVYYVSRYAFEHW---------------NGIPIIADGGIKSSG 357 Query: 272 DILKSIILGASLG 284 DI+K++ LGAS Sbjct: 358 DIVKALSLGASCV 370 >gi|326483317|gb|EGE07327.1| glutamate synthase [Trichophyton equinum CBS 127.97] Length = 2132 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI + +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYVANELRAIMAKLGFRSVNEMVGRAELLK 1250 >gi|326472262|gb|EGD96271.1| glutamate synthase [Trichophyton tonsurans CBS 112818] Length = 2132 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI + +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYVANELRAIMAKLGFRSVNEMVGRAELLK 1250 >gi|262281912|ref|ZP_06059681.1| dihydroorotate dehydrogenase 1A [Streptococcus sp. 2_1_36FAA] gi|262262366|gb|EEY81063.1| dihydroorotate dehydrogenase 1A [Streptococcus sp. 2_1_36FAA] Length = 312 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFVYFKKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITSELKTIMEEKGYENLEDFR 304 >gi|124003459|ref|ZP_01688308.1| glutamate synthase [Microscilla marina ATCC 23134] gi|123991028|gb|EAY30480.1| glutamate synthase [Microscilla marina ATCC 23134] Length = 542 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 13/207 (6%) Query: 90 MAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGL 149 G V D N + ++ + + + G A + Sbjct: 209 FGTGYYGVRNKDGNFSMDKLVELVEKNSFIRAVEIKLSQGAKPGKGGILPASKITKEIAE 268 Query: 150 FLHLNPLQEIIQPNGNTNFADL---SSKIALLSSAMDVPLLLKE-VGCGLSSMDIELGL- 204 L ++I+ P +T F ++ I ++ +P+ K VG ++ + Sbjct: 269 IRGLPMGKDILSPASHTAFTNVPEMLDFIEDVAENTGLPVGFKSAVGQLKMWEELADLMV 328 Query: 205 --KSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQF 261 G + I G GGT + + F + + + R + F Sbjct: 329 QRGKGPDFITIDGGEGGTGAAPHSFADHVSLPFAFAF-----TSVYQIFLERGLTDRVVF 383 Query: 262 IASGGLRNGVDILKSIILGASLGGLAS 288 +ASG L L ++ +GA L +A Sbjct: 384 VASGRLGFPAKALMAMAMGADLIQMAR 410 >gi|300718622|ref|YP_003743425.1| glutamate synthase, large subunit [Erwinia billingiae Eb661] gi|299064458|emb|CAX61578.1| Glutamate synthase, large subunit [Erwinia billingiae Eb661] Length = 1843 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1128 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1187 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG + G Sbjct: 1188 VAGNTGGTGAASVTSLKYTGR-----VAEIGIAEVHQALCANGLREKVLLRCSGAQQTGS 1242 Query: 272 DILKSIILGAS---LGGLASPFLK-------------PAMDSSDA-------VVAAIESL 308 D++KS +LG G A LK +++A + ++ Sbjct: 1243 DVVKSALLGGDSFEFGTTALMMLKCVMAKNCNVKCPAGLTTNAEAFDGDPRQLAQYFMNV 1302 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + ++E + L+ Sbjct: 1303 AHEVREILARLGLRSLREARGRSDLLH 1329 >gi|302510767|ref|XP_003017335.1| hypothetical protein ARB_04215 [Arthroderma benhamiae CBS 112371] gi|291180906|gb|EFE36690.1| hypothetical protein ARB_04215 [Arthroderma benhamiae CBS 112371] Length = 2128 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI + +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIACLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYVANELRAIMAKLGFRSVNEMVGRAELLK 1250 >gi|253681153|ref|ZP_04861956.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum D str. 1873] gi|253563002|gb|EES92448.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum D str. 1873] Length = 298 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 117/317 (36%), Gaps = 57/317 (17%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERI---------------------NRNLAIAAE 84 +V G L P++ +S T G + + I N + I Sbjct: 2 TNVNICGVNLKNPVIAASGTFGFGEEYKEIFDVSKLGGISTKGLTINPKEGNDGIRIWET 61 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAP-----HTVLISNLGAVQLN-YDFGVQKAH 138 + + +VG Q +F ++ P TV+ +NLG + Y GV+K + Sbjct: 62 ASGIMNSVGLQNPGL------NTF-IKDKLPKMKKLDTVIFANLGGGSIEDYLMGVEKLN 114 Query: 139 QA-VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + V ++ + ++ + D+ SK+ + PL++K + Sbjct: 115 KVDVDIIELNISCPNVKHGGMAFGIKSEVAY-DVVSKVRNICKK---PLIVKLSPNAENI 170 Query: 198 MD-IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 +D E K+G + I+ + + ++I I P++L M C Sbjct: 171 VDMAESCCKAGADGISLVNTFKGMAIDIKQRKSVFNNIYAGLSGPAIK-PIALRMVHEVC 229 Query: 257 N--EAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDSSDAVVAAIESLRKEFI 313 + I GG+ + D ++ I+ GA+ + F+KP + + IE + Sbjct: 230 KNIDVPVIGMGGIVSAEDAIEFIMAGATAIQVGTGNFMKPNIS-----LDIIEGIE---- 280 Query: 314 VSMFLL--GTKRVQELY 328 MF+L G + ++E+ Sbjct: 281 --MFMLNEGIRSIEEIR 295 >gi|229078651|ref|ZP_04211207.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus Rock4-2] gi|228704654|gb|EEL57084.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus Rock4-2] Length = 363 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIVGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGAIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|148273743|ref|YP_001223304.1| inosine 5-monophosphate dehydrogenase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831673|emb|CAN02642.1| putative inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 372 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 53/202 (26%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S S + + Sbjct: 178 NLKKFIYELDVPVI---VGGAATYTAALHLMRTGAAGVLV-GFGGGAASTTRSTLGIHAP 233 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + IA GGL + DI+K+I +GA L Sbjct: 234 MATALSD--------VAGARRDYMDESGGRYVHVIADGGLGSSGDIVKAIAVGADAVMLG 285 Query: 288 SPF-----------------------------------LKPAMDSSDAVVAAIESLRKEF 312 S L+ + +L Sbjct: 286 STLARATDAPGQGFHWGAEAHHSELPRGHRVRVDQVAPLEQILYGPSTTADGSANLVGAL 345 Query: 313 IVSMFLLGTKRVQELYLNTALI 334 +M G ++E ++ Sbjct: 346 RRAMATTGYSDLKEFQRVEVVV 367 >gi|15839021|ref|NP_299709.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa 9a5c] gi|9107621|gb|AAF85229.1|AE004052_4 inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa 9a5c] Length = 485 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 61/220 (27%), Gaps = 69/220 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIESHR 228 + ++A + L+ +G + + D L L +G + G+ + Sbjct: 255 GVLDRVAWIKRYFPQ---LQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTT----- 306 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P +++M + IA GG+R DI K++ GAS + Sbjct: 307 -------RMVAGVGVPQITAVQMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIG 359 Query: 288 SPFL---------------------------------------------KPAMDSSDA-- 300 F K + + Sbjct: 360 GLFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRYFQEASDVDKLVPEGIEGRV 419 Query: 301 -----VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V + L +M +G ++E+ ++ Sbjct: 420 PYRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVK 459 >gi|315636404|ref|ZP_07891650.1| glutamate synthase alpha subunit [Arcobacter butzleri JV22] gi|315479317|gb|EFU70004.1| glutamate synthase alpha subunit [Arcobacter butzleri JV22] Length = 1480 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 39/210 (18%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P +I +I L+ + +K V K+ I+ Sbjct: 981 PHHDIYSIEDLAQLIFDLKQINPLAK-----ITVKLVSSIGVGTIAAGVAKAYADKIIIS 1035 Query: 215 GR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 G GGT + + S + + + G+ + A GGL+ G+D+ Sbjct: 1036 GGDGGTGAAPLTSIKHAGNP-----WEMGLSEAHNALKANHLREFVHVQTDGGLKTGLDV 1090 Query: 274 LKSIILGASLGGLASPFLKPA----------------------------MDSSDAVVAAI 305 +K+ +LGA + L + + +++ Sbjct: 1091 VKAAMLGAESYAFGTASLTLLGCKILRICHTNKCSVGVATQDENLRDFFTGTVERLISYF 1150 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + ++ + LG K ++E+ + L++ Sbjct: 1151 TFIAEDVRAILASLGYKSIEEVVGRSDLLK 1180 >gi|315613377|ref|ZP_07888286.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis ATCC 49296] gi|315314612|gb|EFU62655.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis ATCC 49296] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDCILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMAEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|157738053|ref|YP_001490737.1| glutamate synthase, large chain [Arcobacter butzleri RM4018] gi|157699907|gb|ABV68067.1| glutamate synthase, large chain [Arcobacter butzleri RM4018] Length = 1479 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 39/210 (18%) Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 P +I +I L+ + +K V K+ I+ Sbjct: 980 PHHDIYSIEDLAQLIFDLKQINPLAK-----ITVKLVSSIGVGTIAAGVAKAYADKIIIS 1034 Query: 215 GR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 G GGT + + S + + + G+ + A GGL+ G+D+ Sbjct: 1035 GGDGGTGAAPLTSIKHAGNP-----WEMGLSEAHNALKANHLREFVHVQTDGGLKTGLDV 1089 Query: 274 LKSIILGASLGGLASPFLKPA----------------------------MDSSDAVVAAI 305 +K+ +LGA + L + + +++ Sbjct: 1090 VKAAMLGAESYAFGTASLTLLGCKILRICHTNKCSVGVATQDENLRDFFTGTVERLISYF 1149 Query: 306 ESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + ++ + LG K ++E+ + L++ Sbjct: 1150 TFIAEDVRAILASLGYKSIEEVVGRSDLLK 1179 >gi|72162994|ref|YP_290651.1| inosine 5-monophosphate dehydrogenase [Thermobifida fusca YX] gi|71916726|gb|AAZ56628.1| IMP dehydrogenase related 2 [Thermobifida fusca YX] Length = 370 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 91/281 (32%), Gaps = 45/281 (16%) Query: 40 SFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKMIERINR--NLAIA-------------- 82 +EV S + + PL++S M + + K I LA+ Sbjct: 31 DPEEVSLSWQIDAYRFDTPLMVSPMDSVVSPKTAIAIGELGGLAVLDLEGLWTRYEDPEP 90 Query: 83 --AEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA 140 AE ++ A ++R+ IK + + + A +L+ Q H+A Sbjct: 91 LLAEIRELDDATATRRLQEIYAEPIKEELIGRRIEEIRRAGVVTAARLSPQRTAQY-HKA 149 Query: 141 VHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD 199 V G D + + E + + +DVP++ VG + Sbjct: 150 VIEAGVDIFVIRGTTVSAEHVSGRTEPL------NLKQFIYDLDVPVV---VGGCATYTA 200 Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE- 258 +++G + G GG S S + + D + AR + Sbjct: 201 ALHLMRTGAAGVLV-GFGGGSGHTTRSVLGVAVPMATAIGD--------VAAARRDYLDE 251 Query: 259 -----AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 IA GG+ DI K++ GA + SP + Sbjct: 252 SGGRYVHVIADGGMTRSGDIAKALACGADAVMVGSPLARAV 292 >gi|307704568|ref|ZP_07641473.1| dihydroorotate dehydrogenase [Streptococcus mitis SK597] gi|307621865|gb|EFO00897.1| dihydroorotate dehydrogenase [Streptococcus mitis SK597] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKGIMAEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|302412409|ref|XP_003004037.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] gi|261356613|gb|EEY19041.1| cytochrome b2 [Verticillium albo-atrum VaMs.102] Length = 411 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + + N F R L + + VD S LG K+ P +++ G Sbjct: 138 ADDEITLRENHAAFHRIWFRPRIL--VDVEHVDFSTTMLGTKVDMPFYVTATALGKLGHP 195 Query: 73 ERINRNLAIAAEKTKVAMAVGS 94 E L AA K V + + Sbjct: 196 EG-EVLLTRAAAKHNVIQMIPT 216 >gi|255973411|ref|ZP_05423997.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T2] gi|257083426|ref|ZP_05577787.1| dihydroorotate dehydrogenase A [Enterococcus faecalis Fly1] gi|255966283|gb|EET96905.1| dihydroorotate dehydrogenase A [Enterococcus faecalis T2] gi|256991456|gb|EEU78758.1| dihydroorotate dehydrogenase A [Enterococcus faecalis Fly1] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF G KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 2 DISVEFSGHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 59 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 60 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 116 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 117 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 177 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 236 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + L KE Sbjct: 237 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFARLAKEL 289 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 290 QEIMAAKGYESIEEFR 305 >gi|168211806|ref|ZP_02637431.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens B str. ATCC 3626] gi|170710244|gb|EDT22426.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens B str. ATCC 3626] Length = 355 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 33/246 (13%) Query: 78 NLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 NLA A K + + G+Q + + L +NL A++ + +K Sbjct: 30 NLASAVTKAGGIGIISGAQPGYLE-----------EDFKNNPLEANLRALKKHIRIAKEK 78 Query: 137 AHQAVH----VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL--LLKE 190 + + ++ + H+ + + + A L S + + +V + ++ Sbjct: 79 SQNGIIGVNLMVAMNNYAEHVKAAID-SGVDLIISGAGLPSHLPKFTKGSNVKIAPIVSS 137 Query: 191 VGCGLSSMDIELG----LKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + I K I G GG ES D D I Sbjct: 138 LKAA---KVILKLWDRHHKVSPDMIVIEGPKAGGHLGFTKESLEDESKKFDSTILD--II 192 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 S+ Y + I +GG+ +G DI K + LGAS +A+ F+ A DA + Sbjct: 193 KETSIYE-DKYEKKIPIIVAGGVFDGKDIAKYLKLGASGVQMATRFV--ATYECDANIKF 249 Query: 305 IESLRK 310 E+ Sbjct: 250 KEAYIN 255 >gi|90416234|ref|ZP_01224166.1| inosine-5-monophosphate dehydrogenase [marine gamma proteobacterium HTCC2207] gi|90331959|gb|EAS47173.1| inosine-5-monophosphate dehydrogenase [marine gamma proteobacterium HTCC2207] Length = 491 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 51/146 (34%), Gaps = 23/146 (15%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + ++ ++ + + DV ++ V G + +G + G+ + Sbjct: 252 HSKNVLDRVTWIKTNFPDVQVIGGNVATG---AGAKALADAGADGVKVGIGPGSICTT-- 306 Query: 226 SHRDLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 + G+P T ++ + + IA GG+R D+ K+++ GAS Sbjct: 307 ----------RIVTGIGVPQITAIADAVVALAGTDVPVIADGGIRYSGDMSKAVVAGASA 356 Query: 284 GGLASPFLKPAMDSSDAVVAAIESLR 309 + + ++ IE + Sbjct: 357 VMMG-----SMLAGTEEAPGEIEIYQ 377 >gi|51701776|sp|Q6V3X0|PYRD_SACCA RecName: Full=Dihydroorotate dehydrogenase; Short=DHOD; Short=DHODase; Short=DHOdehase; AltName: Full=Dihydroorotate oxidase gi|34099823|gb|AAQ57200.1| dihydroorotate dehydrogenase 1a [Naumovia castellii] Length = 314 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 244 PTPLSLEMARPY----CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSD 299 PT L R + + + +GG+R G D+ + ++ GAS+ + + +K + Sbjct: 229 PTA--LANVRAFYTRLNPSIKIVGTGGIRTGKDVFEHLLCGASMVQIGTELVK------E 280 Query: 300 AVVAAIESLRKEFIVSMFLLGTKRVQELY 328 V E L +E M G ++E Sbjct: 281 GV-PIFERLERELKEVMDKKGYTTIEEFR 308 >gi|325291587|ref|YP_004277451.1| glutamate synthase large subunit [Agrobacterium sp. H13-3] gi|325059440|gb|ADY63131.1| glutamate synthase large subunit [Agrobacterium sp. H13-3] Length = 1834 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ + A V +++K V K+G + Sbjct: 1117 PGVELVSPPPHHDTYSIEDLAQLIHDAKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1176 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG + Sbjct: 1177 VAGNTGGTGAAAVTSLKYTGRA-----AEIGIAEVHQALCATGLRAKVLLRCSGAHQTAS 1231 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 D++KS +LG + L + A+ + ++ Sbjct: 1232 DVVKSALLGGDSFEFGTTALMMLKCVMAKNCNIKCPAGLTTNQEAFNGDPRALAQYLMNI 1291 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + ++E + L+ Sbjct: 1292 AHETREILAALGLRSLREARGRSDLLH 1318 >gi|315424919|dbj|BAJ46595.1| inosine-5'-monophosphate dehydrogenase [Candidatus Caldiarchaeum subterraneum] Length = 440 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 88/306 (28%), Gaps = 106/306 (34%) Query: 125 AVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV 184 A Q+ V+K GL + +++++ PN + + ++++A+ V Sbjct: 129 AKQIFMKHKVEKLPLVDSEWNIKGLITSADIVKKLMHPNASRDSRGRL----MVAAAIGV 184 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT-----------------------SW 221 + + L + D+A G T + Sbjct: 185 R------EEAMDRAEALLAAGADCLVIDVA-HGHTDMVINLIKQLRRSFGEDFELVAGNV 237 Query: 222 SRIESHRDLESDIGI---------------VFQDWGIPTPLSLEMARPYCN--EAQFIAS 264 + E DL + V G+P ++ IA Sbjct: 238 ATAEGVEDLAAAGASGVKVGVGPGSVCTTRVVAGVGVPQLTAIMDCAETAEAMGVPIIAD 297 Query: 265 GGLRNGVDILKSIILGASLG----------------------------GLASP------- 289 GG+R+ D++K++ GAS G+AS Sbjct: 298 GGIRSSADLVKALAAGASTVMIGRLLAGTDESPGAVVVKNGRKMKVYRGMASFYAMLAKE 357 Query: 290 -------FLKPAMDSS---DAVVAA----------IESLRKEFIVSMFLLGTKRVQELYL 329 FL+ A + S + V A ++ L + LG ++EL Sbjct: 358 SRAGDEDFLQDASEYSFIAEGVEAYVPYKGSASDVVKQLVAGLRSGLSYLGASNIKELQR 417 Query: 330 NTALIR 335 N IR Sbjct: 418 NAVFIR 423 >gi|269123714|ref|YP_003306291.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus moniliformis DSM 12112] gi|268315040|gb|ACZ01414.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus moniliformis DSM 12112] Length = 486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 31/195 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D + + ++ L +GA G + ++ A + ++ Sbjct: 194 ITIKDIDNVANYPNACKDEKGRL--RVGAA---VGIGSDTLRRVKALVDAGVDVITVDSA 248 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + KI + ++ L+ G ++ +++G+ + Sbjct: 249 --------HGHSKGVIEKIKEIRKEFPNLNLIG---GNIVTKQAAIDLVEAGVDAVKVGV 297 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDI 273 G+ + V G+P ++ YCNE IA GG++ DI Sbjct: 298 GPGSICTT------------RVVSGVGMPQLSAVMEVAEYCNERGIGVIADGGIKLSGDI 345 Query: 274 LKSIILGASLGGLAS 288 +K+I GA L Sbjct: 346 VKAIAAGADCVMLGG 360 >gi|254436972|ref|ZP_05050466.1| Conserved region in glutamate synthase family [Octadecabacter antarcticus 307] gi|198252418|gb|EDY76732.1| Conserved region in glutamate synthase family [Octadecabacter antarcticus 307] Length = 1512 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 49/170 (28%), Gaps = 32/170 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + S + + G+ Sbjct: 1027 VTVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASPASSI----KYAGLPWEMGLTE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + GGLR G DI+ + +LGA G+ + L Sbjct: 1083 AHQVLAMNNLRERVTLRTDGGLRTGRDIVMAAMLGAEEYGVGTAALIAMGCIMVRQCQSN 1142 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 ++D VV I E + +G + + E+ Sbjct: 1143 TCPVGVCTQDEALRDKFTGNADKVVNLITFYATEVREILAEIGARSMDEI 1192 >gi|89901066|ref|YP_523537.1| inosine-5'-monophosphate dehydrogenase [Rhodoferax ferrireducens T118] gi|89345803|gb|ABD70006.1| inosine-5'-monophosphate dehydrogenase [Rhodoferax ferrireducens T118] Length = 489 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 31/197 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 + D SF L +GA + G ++ +A+ G D + + Sbjct: 194 ITVKDITKQTSFPNAARDAQGKL--RVGAA-VGVGEGTEERVEALARAGVDAIVV----- 245 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + + + ++ + + ++ + G +++G + Sbjct: 246 -----DTAHGHSKGVIDRVRWVKKNFPHIEVIGGNIATG---AAALALVEAGADAVKVGI 297 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDI 273 G+ + + G+P ++++ IA GG+R DI Sbjct: 298 GPGSICTT------------RIVAGVGVPQIMAIDSVAMALRGTGVPLIADGGIRFSGDI 345 Query: 274 LKSIILGASLGGLASPF 290 K+I GAS + F Sbjct: 346 AKAIAAGASTVMMGGMF 362 >gi|78485957|ref|YP_391882.1| inosine-5'-monophosphate dehydrogenase [Thiomicrospira crunogena XCL-2] gi|78364243|gb|ABB42208.1| inosine-5'-monophosphate dehydrogenase [Thiomicrospira crunogena XCL-2] Length = 486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 31/192 (16%) Query: 101 DHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEII 160 + ++ + + + + +G YD V V+ D H Sbjct: 200 EKSSEHPYAAKDSNGRLRVGAAVGTGVETYDRVAALVKAGVDVIIVDTAHGH-------- 251 Query: 161 QPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTS 220 + K+ + + P + G ++ +K+G + G+ Sbjct: 252 -------SQGVLDKVKWVKE--NYPQIDVVGGNIATAEAALDLVKAGADAVKVGIGPGSI 302 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSII 278 + + G+P ++ + IA GG+R D+ K+++ Sbjct: 303 CTT------------RIVSGVGVPQLTAIANVAEALKDKGIPLIADGGIRFSGDVAKALV 350 Query: 279 LGASLGGLASPF 290 GAS L S F Sbjct: 351 SGASAVMLGSMF 362 >gi|227112762|ref|ZP_03826418.1| glutamate synthase subunit alpha [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1486 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 ++ ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVSNGLRHKIRLQVDGGLKTGLDIVKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + V + + E V M LG R+ +L T L+ Sbjct: 1111 NNCATGVATQDEKLRRDHYHGLPERVTNYFQFIAHETRVLMAELGVSRLVDLIGRTDLL 1169 >gi|312866045|ref|ZP_07726266.1| dihydroorotate dehydrogenase 1A [Streptococcus downei F0415] gi|311098449|gb|EFQ56672.1| dihydroorotate dehydrogenase 1A [Streptococcus downei F0415] Length = 311 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSM---DIELGLKSGIRYFDIAGRGG 218 P +F ++ + S PL +K + + K + + + G Sbjct: 138 PQIAYDFETTDQILSQVFSYFTKPLGIKLPPYFDIAHFDLAAAIFNKYPLTFVNCINSVG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + D+ PT L+ A + Q I +GG+++G D Sbjct: 198 -NGLVIEDETVVIKPKNGFGGIGGDYVKPTALANVHAFYQRLNPSIQIIGTGGVKSGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + AV E + KE M G + +++ Sbjct: 257 FEHILCGASMVQIGT----ALHQEGPAV---FERITKELQAIMVEKGYQTLEDFR 304 >gi|329119489|ref|ZP_08248174.1| inosine-5'-monophosphate dehydrogenase [Neisseria bacilliformis ATCC BAA-1200] gi|327464422|gb|EGF10722.1| inosine-5'-monophosphate dehydrogenase [Neisseria bacilliformis ATCC BAA-1200] Length = 487 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 23/143 (16%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + V ++ G ++ + +G + G+ + Sbjct: 256 GVLDRVKWVKEHFPQVQVIG---GNIATAKAALDLVAAGADAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ + IA GG+R DI K++ GAS L Sbjct: 308 -------RIVAGVGVPQLTAIHNVAEALKDTGVPLIADGGIRFSGDIAKALAAGASSVML 360 Query: 287 ASPFLKPAMDSSDAVVAAIESLR 309 F ++ IE + Sbjct: 361 GGMF-----AGTEEAPGEIELYQ 378 >gi|81428060|ref|YP_395059.1| dihydroorotate dehydrogenase 1A [Lactobacillus sakei subsp. sakei 23K] gi|78609701|emb|CAI54747.1| Putative dihydroorotate oxidase, catalytic subunit [Lactobacillus sakei subsp. sakei 23K] Length = 313 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 44/210 (20%) Query: 124 GAVQLNYDF-GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 G Q YDF V++ V + L + L P +I+ ++A + + Sbjct: 136 GKPQTGYDFETVEQILTRVFEVYEGPLGVKLPPYFDIVH----------FDQMAAILNQF 185 Query: 183 DVPLL--LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQD 240 + + + +G GL+ + ++ G GG I+ Sbjct: 186 PLAFINSVNSIGNGLTIDAATERVSIKPKH----GFGGIGGDYIK--------------- 226 Query: 241 WGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 PT L+ + E Q I +GG+++G D+ + ++ GAS+ + + K + Sbjct: 227 ---PTALANVHTFYQRLKPEIQIIGTGGVKSGQDVFEHLLCGASMVQVGTALHK---EGP 280 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + L E M G ++ + Sbjct: 281 ----QIFDRLTAELQTIMQQKGYNKIADFK 306 >gi|117927576|ref|YP_872127.1| inosine 5-monophosphate dehydrogenase [Acidothermus cellulolyticus 11B] gi|117648039|gb|ABK52141.1| IMP dehydrogenase family protein [Acidothermus cellulolyticus 11B] Length = 369 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 92/293 (31%), Gaps = 42/293 (14%) Query: 25 FFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSM-TGGNNKMIERINR------ 77 FD ++ D+V + + + P+L S+M + + + + I R Sbjct: 17 GFDAISIVPSRRTR-DPDQVSVAWQIDAYRFEAPILSSAMDSVASPQTVVEIGRLGGLGV 75 Query: 78 -NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLG-AVQLNYDFGVQ 135 +L + + + ++ D + +R+ + + ++ + GV Sbjct: 76 LDLEGLWTRYEDPEPLYAEIAELPDDRVLD--RIREIYAEPIKEDLIKERIRQIREAGVV 133 Query: 136 KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSS------KIALLSSAMDVPLLLK 189 A A+ L +I G T A+ S + +DVP++ Sbjct: 134 AAGALSPQRTAEFYKAVLEAGVDIFVIRGTTVSAEHVSQRVEPLNLKKFIYELDVPVI-- 191 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 VG + +++G + GG + G+P + Sbjct: 192 -VGGSYTYQAALHLMRTGAAGILVGVGGG------------AAHTTRSVLGIGVPMATVV 238 Query: 250 EMARPYCNE---------AQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 A + IA G +R G DI K+I GA + P + Sbjct: 239 ADAAAARRDYLDESGGRYVHVIADGAMRTGGDIAKAIACGADAVMIGLPLARA 291 >gi|326403857|ref|YP_004283939.1| glutamate synthase large subunit [Acidiphilium multivorum AIU301] gi|325050719|dbj|BAJ81057.1| glutamate synthase large subunit [Acidiphilium multivorum AIU301] Length = 1514 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 54/169 (31%), Gaps = 32/169 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1029 VCVKLVSRSGIGTIAAGVAKAKADAILISGHSGGTGASP----QTSIKYAGLPWEMGLSE 1084 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP---------------- 289 + M + + GG++ G D++ + +LGA G+ + Sbjct: 1085 THQVLMLNRLRHMVKLRTDGGIKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1144 Query: 290 -----------FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQE 326 L+ + + + V+ + ++ + LG +R+++ Sbjct: 1145 TCPVGVCTQDEALRAKFEGTPEKVINLFSFIAEDVRHILASLGVRRLED 1193 >gi|312136422|ref|YP_004003759.1| inosine-5'-monophosphate dehydrogenase [Methanothermus fervidus DSM 2088] gi|311224141|gb|ADP76997.1| inosine-5'-monophosphate dehydrogenase [Methanothermus fervidus DSM 2088] Length = 494 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 16/133 (12%) Query: 191 VGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLE 250 VG + E + + + G+ + + G+P ++ Sbjct: 274 VGNIATREAAEDLISQEVDGLKVGIGPGSMCTT------------RIVAGVGVPQLSAIA 321 Query: 251 MARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESL 308 + IA GG+R DI K+I +GA L + + + V+ I Sbjct: 322 EVSDVAAEYDIPVIADGGIRYSGDIAKAIAVGADAVMLGNLLAGTSEAPGEIVI--INGR 379 Query: 309 RKEFIVSMFLLGT 321 + + M LG Sbjct: 380 KYKQYRGMGSLGA 392 >gi|261837918|gb|ACX97684.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori 51] Length = 327 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 85/280 (30%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M IN ++A + Sbjct: 8 YEDIQLIPNKCIVNSRSECDTTVTLGKHAFKMPVV-------PANMQTIINDSIAEFLAE 60 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ--AVHV 143 + D A F + + ++G + Y F + A Q A Sbjct: 61 NG-----YFYIMHRFDGAARIPFVKKMKERQWISSISVGVKKEEYLFIEELAKQKLASDY 115 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 + D H N + E+IQ + + +++ + P + Sbjct: 116 ITIDIAHGHSNSVIEMIQ-----HIKTHLPETFVIAGNVGTP------------EAVREL 158 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 159 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 207 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KSI GA++ + S F S + + Sbjct: 208 DGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 247 >gi|322831779|ref|YP_004211806.1| inosine-5'-monophosphate dehydrogenase [Rahnella sp. Y9602] gi|321166980|gb|ADW72679.1| inosine-5'-monophosphate dehydrogenase [Rahnella sp. Y9602] Length = 544 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 39/148 (26%), Gaps = 54/148 (36%) Query: 242 GIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 G+P T +S + IA GG+R DI K+I GAS + Sbjct: 370 GVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMVGGMLAGTEESPGE 429 Query: 292 -------------------------------------KPAMDSSDAVVAA---IESLRKE 311 K + + VA ++ + + Sbjct: 430 IELYQGRSYKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRVAYKGRLKEIIHQ 489 Query: 312 ----FIVSMFLLGTKRVQELYLNTALIR 335 M L G + +L +R Sbjct: 490 QMGGLRSCMGLTGCATIDDLRTKAEFVR 517 >gi|317010990|gb|ADU84737.1| 2-nitropropane dioxygenase [Helicobacter pylori SouthAfrica7] Length = 363 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 26/203 (12%) Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 R+ + L +N+ +Y ++ + +A + G L N P +F+ Sbjct: 88 RKICGNNPLGANILYAINDYGRVLRDSCEAGADIIITGAGLPTN------MPEFAKDFSG 141 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHR 228 + + I ++SSA + +L K D K F + G GG + E Sbjct: 142 V-ALIPIISSAKALKILCK------RWSD---RYKRIPDAFIVEGPLSGGHQGFKYEDCF 191 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS 288 E + + + A IA+GG+ + DI + LGAS +A+ Sbjct: 192 KEEFQLENL--------VPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMAT 243 Query: 289 PFLKPAMDSSDAVVAAIESLRKE 311 FL + A + +L+KE Sbjct: 244 RFLGTKECDAKAYADLLPTLKKE 266 >gi|157149990|ref|YP_001449596.1| dihydroorotate dehydrogenase 1A [Streptococcus gordonii str. Challis substr. CH1] gi|157074784|gb|ABV09467.1| Dihydroorotate dehydrogenase [Streptococcus gordonii str. Challis substr. CH1] Length = 312 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFVYFKKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + VVA E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVVA-FERITAELKTIMEEKGYESLEDFR 304 >gi|89097026|ref|ZP_01169917.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. NRRL B-14911] gi|89088406|gb|EAR67516.1| guanosine 5'-monophosphate oxidoreductase [Bacillus sp. NRRL B-14911] Length = 327 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 86/279 (30%), Gaps = 42/279 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +VEF G+ P++ M I+ ++I AE Sbjct: 7 YEDIQLIPAKSIVNSRTECDTTVEFGGRTFKLPVV-------PANMQTIIDERISIQLAE 59 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 K + +F +R L +++ ++ Q Sbjct: 60 KNYF------YVMHRFQPEKRLAF-VRDMKSRG-LYASISVGVKEEEYTF--VQQLAEE- 108 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 N + E I + ++ + I + + ++ G + + Sbjct: 109 ---------NLVPEYITIDIAHGHSNAVIKMIQHIKQLLPGSFVI--AGNVGTPEAVREL 157 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L ++ IA Sbjct: 158 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIA 206 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 GG+R DI KS+ GAS+ + S F + V Sbjct: 207 DGGIRTHGDIAKSVRFGASMVMIGSLFAGHEESPGETVE 245 >gi|302343798|ref|YP_003808327.1| inosine-5'-monophosphate dehydrogenase [Desulfarculus baarsii DSM 2075] gi|301640411|gb|ADK85733.1| inosine-5'-monophosphate dehydrogenase [Desulfarculus baarsii DSM 2075] Length = 487 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 71/201 (35%), Gaps = 29/201 (14%) Query: 93 GSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 G+ + + + + K + + + +GA + G+ +A + + G D L + Sbjct: 189 GTLKGLITIKDIEKVRQYPHASKDELGRLRVGAAVGVGEDGLLRAEKLIEA-GVDVLCV- 246 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYF 211 + + + + + L A P++ V ++ +++G+ Sbjct: 247 ---------DSAHGHSQRVLDTVRELKKAFPSQPVVAGNVA---TARGAADLIEAGVDAV 294 Query: 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRN 269 + G+ + V G+P ++ A IA GG++ Sbjct: 295 KVGVGPGSICTT------------RVVAGVGVPQITAVMEAASVAGPAGVPVIADGGVKF 342 Query: 270 GVDILKSIILGASLGGLASPF 290 D++K++ GA + + S F Sbjct: 343 SGDVVKALAAGAQVVMIGSIF 363 >gi|149581530|ref|XP_001507747.1| PREDICTED: similar to G-protein coupled receptor GPR90 [Ornithorhynchus anatinus] Length = 221 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%) Query: 250 EMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 E+ A+ GG+R G D+LK++ LGA + P L Sbjct: 106 EVVSAVRGRAEVYLDGGVRTGSDVLKALALGARCVFVGRPALWGL 150 >gi|86138311|ref|ZP_01056885.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. MED193] gi|85824836|gb|EAQ45037.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. MED193] Length = 482 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + + + + +V ++ V G + +G + G+ + Sbjct: 250 HSAGVLDAVKRIKAQYPNVQVIAGNVATG---AATSALIDAGADAIKVGIGPGSICTT-- 304 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ + IA GG++ D K+I GAS Sbjct: 305 ----------RMVAGVGVPQLTAIMDCAAAAGDTPVIADGGIKFSGDFAKAIAAGAS-CA 353 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 354 MVGSMIAGTDESPGEVILY 372 >gi|261839331|gb|ACX99096.1| guanosine 5'-monophosphate oxidoreductase [Helicobacter pylori 52] Length = 325 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 85/286 (29%), Gaps = 54/286 (18%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D +V P++ M IN ++A AE Sbjct: 6 YEDIQLIPNKCIVNSRSECDTTVTLGKHTFKMPVV-------PANMQTIINDSIAEFLAE 58 Query: 85 KTKVAMA---VGSQRVMF----SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKA 137 + G+ R+ F + I S + +LI L +L D+ Sbjct: 59 NGYFYIMHRFNGATRIPFVKKMKECQWISSISVGVKKEEYLLIEELAKQKLASDY----- 113 Query: 138 HQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS 197 + D H N + I + + + ++ G + Sbjct: 114 ------ITIDIAHGHSN---------------SVIKMIQHIKTHLPETFVI--AGNVGTP 150 Query: 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 + +G + G + G W + +L Sbjct: 151 EAVRELENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAAR 200 Query: 258 EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + IA GG+R DI KSI GA++ + S F S + + Sbjct: 201 K-PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|226305422|ref|YP_002765380.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis PR4] gi|226184537|dbj|BAH32641.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis PR4] Length = 507 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 24/176 (13%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G +A+ + A L ++ + + +++ IA L + + + Sbjct: 236 AVGAGDDAFQRAMALTDAGVDVLVVDSA--------HGHSSNVLDMIAKLKRELGERVQI 287 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G + +++G+ + G+ + V G P + Sbjct: 288 IG-GNVATRAGALALVEAGVDAVKVGVGPGSICTT------------RVIAGVGAPQVTA 334 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 + A C IA GGL+ DI K++ GAS + L +S ++ Sbjct: 335 ILEAVAACKPLGVPVIADGGLQFSGDIAKALAAGAS-TAMLGSLLAGTAESPGELI 389 >gi|187608645|ref|NP_001120470.1| hydroxyacid oxidase (glycolate oxidase) 1 [Xenopus (Silurana) tropicalis] gi|170284675|gb|AAI61299.1| LOC100145574 protein [Xenopus (Silurana) tropicalis] Length = 187 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 16/144 (11%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMI 72 + N F + L R L D S LG+K+S P+ + S +M Sbjct: 31 AEDQQTLADNVAAFSRYRLYPRVL--RDVSATDLSTTILGQKISMPICVGSTA--MQRMA 86 Query: 73 ERINR-NLAIAAEKTKVAMAVGS-QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNY 130 A A M + S E+ + AP ++ L + + Sbjct: 87 HPDGETATARACRAVGTGMMLSSWATSSIE--------EVAEAAPDSLRWMQL-YIYKDR 137 Query: 131 DFGVQKAHQAVHVLGADGLFLHLN 154 + +A G +FL ++ Sbjct: 138 NLTKSLVQRA-ERSGYKAIFLTVD 160 >gi|148657094|ref|YP_001277299.1| glutamate synthase [Roseiflexus sp. RS-1] gi|148569204|gb|ABQ91349.1| glutamate synthase (NADPH) large subunit [Roseiflexus sp. RS-1] Length = 1554 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 71/229 (31%), Gaps = 38/229 (16%) Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP----LLLKEVGCGLS 196 + V H P +I P + + + L+ V + +K V Sbjct: 1018 IKVSEEIARIRHTTPGVALISPPPHHDIYSIEDLAQLIYDLKQVNPRAAVSVKLVAEAGV 1077 Query: 197 SMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 K G I+G GGT S + S ++ + + G+ + Sbjct: 1078 GTIAAGVAKGGADVIHISGHSGGTGASPLSSIKN-----AGINWELGLAETQQTLVLNGL 1132 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASL-------------------------GGLA--S 288 + GG + G D++ + +LGA G+A Sbjct: 1133 RGRVRLRVDGGFKTGRDVVMAALLGADEFSFGTAALIAEGCVMARTCHTNNCPVGVATQR 1192 Query: 289 PFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P L+ + VV + +E + +G + + ++ T L+R Sbjct: 1193 PDLRARFPGKPEHVVNFFRHVAQEVREILASIGARSLNDIIGRTDLLRQ 1241 >gi|91777082|ref|YP_546838.1| glutamate synthase (NADPH) [Methylobacillus flagellatus KT] gi|91711069|gb|ABE50997.1| Glutamate synthase (NADPH) [Methylobacillus flagellatus KT] Length = 1836 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1122 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1181 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A ++ SG + Sbjct: 1182 VAGNTGGTGAAAVTSLKYTGRA-----AEIGIAEVHHALCANGLRDKVILRCSGAHQTAS 1236 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 D++KS +LG + L + A+ + ++ Sbjct: 1237 DVVKSAMLGGDSFEFGTTALMMLKCVMAKNCNVKCPAGLTTNAEAFDGDPRALAQYLLNV 1296 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + +G + ++E + L++ Sbjct: 1297 AHETREILASIGLRSLREARGRSDLLQ 1323 >gi|99082663|ref|YP_614817.1| glutamate synthase (NADPH) large subunit [Ruegeria sp. TM1040] gi|99038943|gb|ABF65555.1| glutamate synthase (NADPH) large subunit [Ruegeria sp. TM1040] Length = 1510 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYCGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|330684931|gb|EGG96613.1| oxidoreductase, 2-nitropropane dioxygenase family protein [Staphylococcus epidermidis VCU121] Length = 356 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 40/273 (14%) Query: 48 VEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKS 107 LG + +P++ + M G + +A +EK + + + IK+ Sbjct: 8 TRLLG--IQYPIIQAGMAGSTTASL------VATVSEKGGLGTIGAGYFSIDKLESEIKA 59 Query: 108 FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN 167 + + P V NL N + Q L HL ++ + Sbjct: 60 VKEKSSQPFGV---NLFVPNQNATVNPLQVDQMNEWLKPYRRAFHLEEP--VVNIDETQK 114 Query: 168 FADLSSKIAL----LSS-AMDVP--LLLK-----EVGCGLSSMDIELGLKSGIRYFDIAG 215 F + + I + S +P L +K +V ++ +E +++ DI Sbjct: 115 FNEAVNMIIKYKVPICSFTFGIPDALTIKKLKEHQVILIGTATTVEEAIENEKAGIDIVV 174 Query: 216 RGGTSWSRIESHRDLESDIGIVFQDWGIPT-----PLSLEMARPYCNEAQFIASGGLRNG 270 G S HR F G T +SL +A+GG+ + Sbjct: 175 AQG---SEAGGHRG-------AFLQIGHSTEPMVGTMSLVPQIVDHVSIPVVAAGGIMDE 224 Query: 271 VDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 +L S++LGA + + FL ++ ++ Sbjct: 225 RGLLASLMLGAQGVQMGTAFLTSHESGANELLK 257 >gi|225023377|ref|ZP_03712569.1| hypothetical protein EIKCOROL_00235 [Eikenella corrodens ATCC 23834] gi|224943855|gb|EEG25064.1| hypothetical protein EIKCOROL_00235 [Eikenella corrodens ATCC 23834] Length = 512 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 23/143 (16%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + + V ++ G ++ + +G + G+ + Sbjct: 280 GVLDRVRWVKAHFPQVQVIG---GNIATAQAARDLVAAGADAVKVGIGPGSICTT----- 331 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ IA GG+R D+ K++ GAS L Sbjct: 332 -------RIVAGVGVPQLTAIHNVAEALQGTGVPLIADGGIRFSGDVAKALAAGASTVML 384 Query: 287 ASPFLKPAMDSSDAVVAAIESLR 309 F +D IE + Sbjct: 385 GGMF-----AGTDEAPGEIELYQ 402 >gi|148260663|ref|YP_001234790.1| glutamate synthase (ferredoxin) [Acidiphilium cryptum JF-5] gi|146402344|gb|ABQ30871.1| glutamate synthase (NADPH) large subunit [Acidiphilium cryptum JF-5] Length = 1512 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 32/179 (17%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 + +K V K+ I+G G + + + + G+ Sbjct: 1027 VCVKLVSRSGIGTIAAGVAKAKADAILISGHSGGTGASP----QTSIKYAGLPWEMGLSE 1082 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP---------------- 289 + M + + GG++ G D++ + +LGA G+ + Sbjct: 1083 THQVLMLNRLRHMVKLRTDGGIKTGRDVVIAAMLGAEEFGIGTASLVAMGCIMVRQCHSN 1142 Query: 290 -----------FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L+ + + + V+ + ++ + LG +R++++ T + Sbjct: 1143 TCPVGVCTQDEALRAKFEGTPEKVINLFSFIAEDVRHILASLGVRRLEDVIGRTDYLHQ 1201 >gi|237748903|ref|ZP_04579383.1| glutamate synthase subunit large [Oxalobacter formigenes OXCC13] gi|229380265|gb|EEO30356.1| glutamate synthase subunit large [Oxalobacter formigenes OXCC13] Length = 1567 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT S + S + S + G+ Sbjct: 1057 ISVKLVSEVGVGTIAAGVAKAKADHIVISGHDGGTGASPLSSIKHTGSP-----WEIGLA 1111 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + A G ++ G D++ + ILGA G A+ L Sbjct: 1112 EAQQTLVLNNLRGRVRIQADGQMKTGRDVVIAAILGADEVGFATAPLVTQGCIMMRKCHL 1171 Query: 292 ---------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K + +V + + +E M LG ++ ++L Sbjct: 1172 NTCPVGVATQDPELRKKFSGKPEYIVNYLFFVAEEMRQIMAQLGIRKYEDL 1222 >gi|27468946|ref|NP_765583.1| glutamate synthase (ferredoxin) [Staphylococcus epidermidis ATCC 12228] gi|57865427|ref|YP_189597.1| glutamate synthase-related protein [Staphylococcus epidermidis RP62A] gi|27316494|gb|AAO05669.1|AE016750_274 glutamate synthase (ferredoxin) [Staphylococcus epidermidis ATCC 12228] gi|57636085|gb|AAW52873.1| glutamate synthase-related protein [Staphylococcus epidermidis RP62A] Length = 525 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 88/275 (32%), Gaps = 39/275 (14%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--------GSQRVMFSD 101 LG L P I + G + + +N AI A +A A G Sbjct: 165 VLGSNLKHPFKIKRLVGQSGMSYGALGKN-AITALSMGLAKAGTWMNTGEGGLSEYHLKG 223 Query: 102 HNAI------KSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVL 144 + I F +R + + + NL F ++ A A V Sbjct: 224 NGDIIYQIGPGLFGVRDHDGNFNRDMFINLAEHNNVRAFEIKLAQGAKTRGGHMEGNKVT 283 Query: 145 GADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI- 200 ++ P + I PN N DL + + L S P+ K V + ++ Sbjct: 284 EEIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNHLQSIGQKPVGFKIVVSKVEEIEAL 343 Query: 201 ---ELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + + + + + G GGT + E + + P S+ Sbjct: 344 VKTMIEIDTYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKYGIR 398 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 N+ + ASG L I ++ LGA L +A + Sbjct: 399 NKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|293367154|ref|ZP_06613825.1| glutamate synthase (NADPH) [Staphylococcus epidermidis M23864:W2(grey)] gi|291318715|gb|EFE59090.1| glutamate synthase (NADPH) [Staphylococcus epidermidis M23864:W2(grey)] gi|329734562|gb|EGG70873.1| glutamate synthase domain protein [Staphylococcus epidermidis VCU045] Length = 525 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 88/275 (32%), Gaps = 39/275 (14%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--------GSQRVMFSD 101 LG L P I + G + + +N AI A +A A G Sbjct: 165 VLGSNLKHPFKIKRLVGQSGMSYGALGKN-AITALSMGLAKAGTWMNTGEGGLSEYHLKG 223 Query: 102 HNAI------KSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVL 144 + I F +R + + + NL F ++ A A V Sbjct: 224 NGDIIYQIGPGLFGVRDHDGNFNRDMFINLAEHNNVRAFEIKLAQGAKTRGGHMEGNKVT 283 Query: 145 GADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI- 200 ++ P + I PN N DL + + L S P+ K V + ++ Sbjct: 284 EEIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNHLQSIGQKPVGFKIVVSKVEEIEAL 343 Query: 201 ---ELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + + + + + G GGT + E + + P S+ Sbjct: 344 VKTMIEIDTYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKYGIR 398 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 N+ + ASG L I ++ LGA L +A + Sbjct: 399 NKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|156544111|ref|XP_001605708.1| PREDICTED: similar to glutamate synthase [Nasonia vitripennis] Length = 2069 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + + +K V + K Sbjct: 1018 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPEARISVKLVSEVGVGVVASGVAKGK 1077 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I+S + + G+ + + A Sbjct: 1078 GEHVVISGHDGGTGASSWTGIKS--------AGLPWELGVAETHQILTLNNLRSRMVVQA 1129 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFL----------------------------KPAM 295 G +R G DI+ + +LGA GL++ L K Sbjct: 1130 DGQMRTGFDIVVAALLGADEFGLSTAPLIAMGCTMMRKCHLNTCPVGIATQDPYLRKKFA 1189 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 S + V+ +L +E M LG R Q+L T L++ Sbjct: 1190 GSPEHVINFFFALAEEVRSIMASLGITRFQDLIGRTDLLK 1229 >gi|150007198|ref|YP_001301941.1| dihydroorotate dehydrogenase 2 [Parabacteroides distasonis ATCC 8503] gi|255015186|ref|ZP_05287312.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_1_7] gi|256840574|ref|ZP_05546082.1| dihydroorotate dehydrogenase 2 [Parabacteroides sp. D13] gi|262381193|ref|ZP_06074331.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_1_33B] gi|298377623|ref|ZP_06987575.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 3_1_19] gi|301311137|ref|ZP_07217065.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3] gi|149935622|gb|ABR42319.1| dihydroorotate dehydrogenase family protein [Parabacteroides distasonis ATCC 8503] gi|256737846|gb|EEU51172.1| dihydroorotate dehydrogenase 2 [Parabacteroides sp. D13] gi|262296370|gb|EEY84300.1| dihydroorotate dehydrogenase 2 [Bacteroides sp. 2_1_33B] gi|298265642|gb|EFI07303.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 3_1_19] gi|300830711|gb|EFK61353.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3] Length = 325 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 31/293 (10%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAE---------KTKVAMAVGS 94 +D ++ G L P+++ S +G NK NR+ A + ++ M + Sbjct: 2 IDIKTQYAGLTLRNPIIVGS-SGLTNKAER--NRDFEKAGAGAIVLKSLFEEQIEMQSEA 58 Query: 95 QRVMFSDHNAIK------------SF-ELRQYAPHTVLISNLGAVQ-LNYDFGVQKAHQA 140 A + EL + + I + ++ D + A Q Sbjct: 59 LMQDSDYPEAADYIRGYVKANQVNDYLELIKKSKELCTIPIIASINCYKADAWIDFARQ- 117 Query: 141 VHVLGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLK-EVGCGLSSM 198 + + GAD L L++ E + D S I + + +P+++K Sbjct: 118 IELAGADALELNV-FFMETELTEDFESIRDTYVSIIRKVKETVSIPVIMKIGKNYSNIPS 176 Query: 199 DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE 258 + L +G + R I + + + ++ D T + Sbjct: 177 LVNLLKVNGADGVVLFNRFYQPDIDINNMQIVSGNVFSNHSDLS-DTIRWTAIVSGKIPG 235 Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKE 311 +S G+ + D++K ++ GAS + S + V+ +E + Sbjct: 236 ISIASSTGVHDWEDVVKCLLAGASAVQMCSAVYTHGAEIISQVLTCVEEWMHQ 288 >gi|85375434|ref|YP_459496.1| glutamate synthase [Erythrobacter litoralis HTCC2594] gi|84788517|gb|ABC64699.1| possible glutamate synthase [Erythrobacter litoralis HTCC2594] Length = 526 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 12/130 (9%) Query: 170 DLSSKIALLSSAMDVPLLLKE-VGCGLSSMDIELGL---KSGIRYFDIAGR-GGTSWSRI 224 + +++ LS P+ +K VG M I + + + G GGT + + Sbjct: 287 EWLTELRELSG--GKPVGIKLCVGQPHEIMAIGKAMLETGLHPDFITVDGAEGGTGAAPL 344 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 E L + +G+ ++ G ++ + + + + ASG + +G + K+ +GA Sbjct: 345 E----LSNSVGMPLRE-GQVWVRNMLVGTGFKDRVKIAASGKIHSGAGMAKAFAIGADCC 399 Query: 285 GLASPFLKPA 294 A PF+ Sbjct: 400 NAARPFMFAL 409 >gi|291568588|dbj|BAI90860.1| inositol-5-monophosphate dehydrogenase [Arthrospira platensis NIES-39] Length = 394 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 60/205 (29%), Gaps = 62/205 (30%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRI 224 +A M +P++L G ++ +K+G + G G G + Sbjct: 186 LAEFCKNMPIPVVL---GNCVTYEVALNLMKAGAVGILVGIGPGAACTSRGVLGVGVPQA 242 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D + +Q+ G IA GGL G DI K I GA Sbjct: 243 TAVADCAAARDQFYQETG--------------RYVSVIADGGLITGGDICKCIACGADGV 288 Query: 285 GLASPF-----------------------------------LKPAMDSSDAVVAAIESLR 309 + SPF L+ + + +L Sbjct: 289 MIGSPFARAEESPGRGFHWGMATPSPVLPRGTRIQVGSTGTLEQILRGPAQLDDGTHNLL 348 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 349 GALKTSMGTLGAKTIKEMQQVEVVI 373 >gi|139473548|ref|YP_001128264.1| dihydroorotate dehydrogenase 1A [Streptococcus pyogenes str. Manfredo] gi|229485589|sp|A2RDV3|PYRD_STRPG RecName: Full=Dihydroorotate dehydrogenase; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gi|134271795|emb|CAM30028.1| putative dihydroorotate dehydrogenase [Streptococcus pyogenes str. Manfredo] Length = 311 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 19/206 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + L + PL +K Sbjct: 110 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTNQLLENLFTYYTKPLGIKLPPY 169 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + IE + F G PT Sbjct: 170 FDIVHFDQAAAIFNKYPLSFVNCVNSIG-NGLVIEDE-QVLIKPKNGFGGIGGDYIKPTA 227 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 228 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 280 Query: 305 IESLRKEFIVSMFLLGTKRVQELYLN 330 E + KE M G + + + N Sbjct: 281 FERVTKELKTIMVEKGYQSLNDFRGN 306 >gi|310801820|gb|EFQ36713.1| FMN-dependent dehydrogenase [Glomerella graminicola M1.001] Length = 353 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 90/320 (28%), Gaps = 66/320 (20%) Query: 22 NKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINR-NLA 80 N + F ++ + L I +E G ++S P I+ + G NK+ +A Sbjct: 40 NHQAFFRHKIVPQQL--IDTNERSTRTTIFGHEVSAPFGIAPI--GINKIYHPQGELPVA 95 Query: 81 IAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY-----------APHTVLISNLGAVQLN 129 A + + + ++ A + R+ P L + Sbjct: 96 KVAGELGFPYYLSTAGSYPTEEVAQANDAGRESTIELQSADKSKIPEGPRFFQLYMPH-D 154 Query: 130 YDFGVQKAHQAVHVLGADGLFLHLNPLQ-----EIIQPNGNTNFADLSSKIALLSSAMDV 184 + + +A H G + Q + + + + + +++ L Sbjct: 155 DELTISLLTRA-HESGFTACIFTTDTWQLGWRHDDVATSNYAFYRGIGAELGLTDPVFQK 213 Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGT--SWSRIESHRDLESDI-------- 234 L K + + D + G SW + RD I Sbjct: 214 HLEEKGINLQKEPERAAAL------WID-SIWHGRAWSWDKAIWARDQWQRISGGKLFLI 266 Query: 235 --------GIVFQDWG-----------------IPTPLSL-EMARPYCNEAQFIASGGLR 268 D G I + +L ++A + G+R Sbjct: 267 KGIQRVDDAEKAADLGFEGIVVSNHAGHQVDGAIASLAALGKIADKVGDRIVVTFDSGVR 326 Query: 269 NGVDILKSIILGASLGGLAS 288 DI+K++ LGA + Sbjct: 327 GAADIVKALALGAKFVFIGG 346 >gi|310796427|gb|EFQ31888.1| cytochrome b2 [Glomerella graminicola M1.001] Length = 202 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 31/136 (22%) Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 + + +P++LK + + + L + G + I+ G E +R++ Sbjct: 90 QVRNQTTLPIILKGIA---TIEEALLAVDKGAKVICISSHG------DEIYRNVP----- 135 Query: 237 VFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 +A G+ G +LK +LG + GL+ PF+ Sbjct: 136 -----------------EVSQNVDIVADSGVHYGNYVLKLRVLGFKVVGLSRPFMYAKYY 178 Query: 297 SSDAVVAAIESLRKEF 312 V+ I + + E Sbjct: 179 GLWGVIKDINTTKIEI 194 >gi|325982652|ref|YP_004295054.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas sp. AL212] gi|325532171|gb|ADZ26892.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas sp. AL212] Length = 487 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 107/363 (29%), Gaps = 90/363 (24%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSM----------TGGNNKMIER 74 FDD LI A + +V + L+ PL+ ++M I Sbjct: 10 FDDVLLIP-AHSTVLPRDVSLATRLTRTISLNIPLISAAMDTVTEAPLAIALAQEGGIGI 68 Query: 75 INRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK-SFELRQYAPHTV--------------L 119 I++N++I A+ VA + + D I + +R+ + Sbjct: 69 IHKNMSIEAQAAHVAQVKRFESGVVKDPITIHPNMTVREVLELIRRHKISGLPVVNGKKV 128 Query: 120 ISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNT-----------NF 168 + + L ++ + +A + + + + + + +E + + NF Sbjct: 129 VGIVTNRDLRFETNLDQAIKHIMTPKSRLVTVKEDTTREAVLGLLHKHRLERVLVVDDNF 188 Query: 169 ADL-SSKIALLSSAMDVPLLLKE------VGCGL-----SSMDIELGLKSGIRYFDIAGR 216 + + + PL K+ VG + S ++G+ + Sbjct: 189 ELCGLITVKDIIKTSEYPLASKDDQEQLRVGAAIGVGEGSEERALALAEAGVDVIVVDTA 248 Query: 217 GGTSWSRIESHRDLESDIGIV--------------------------------------F 238 G S S ++ ++ ++ + Sbjct: 249 HGHSQSVLDRIAWVKKNLSSIQVIGGNVATAAAARAMADHGADAVKVGIGPGSICTTRIV 308 Query: 239 QDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMD 296 GIP ++ IA GG+R DI K++ GA L F A Sbjct: 309 AGVGIPQITAIHDVSEALKGSGVPMIADGGIRYSGDIAKALAAGADSVMLGGLFAGTAEA 368 Query: 297 SSD 299 + Sbjct: 369 PGE 371 >gi|331700762|ref|YP_004397721.1| dihydroorotate dehydrogenase family protein [Lactobacillus buchneri NRRL B-30929] gi|329128105|gb|AEB72658.1| dihydroorotate dehydrogenase family protein [Lactobacillus buchneri NRRL B-30929] Length = 314 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 13/135 (9%) Query: 200 IELGLKSGIRYFDIAGRGGTSWSRIES----HRDLESDIGIVFQDWGIPTPLSLEMA--R 253 E+ I Y ++ G + G + D+ PT L+ A + Sbjct: 181 AEVLNDFPITYINVINSIGNGLVVDPETESVVIKPKGGFGGLGGDYVKPTALANVRALRQ 240 Query: 254 PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFI 313 E I +GG+++G+D+ + ++ GA+L + + F + E + KE Sbjct: 241 RLNPEISIIGTGGIKSGMDVFEHVLCGANLVQIGTAF------GYEGT-PIFERISKELK 293 Query: 314 VSMFLLGTKRVQELY 328 M G K + + Sbjct: 294 DIMDKKGYKTLDDFR 308 >gi|229489546|ref|ZP_04383409.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis SK121] gi|229323643|gb|EEN89401.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis SK121] Length = 507 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 24/176 (13%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 G +A+ + A L ++ + + +++ IA L + + + Sbjct: 236 AVGAGDDAFQRAMALTDAGVDVLVVDSA--------HGHSSNVLDMIAKLKRELGERVQI 287 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 G + +++G+ + G+ + V G P + Sbjct: 288 IG-GNVATRAGALALVEAGVDAVKVGVGPGSICTT------------RVIAGVGAPQVTA 334 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 + A C IA GGL+ DI K++ GAS + L +S ++ Sbjct: 335 ILEAVAACKPLGVPVIADGGLQFSGDIAKALAAGAS-TAMLGSLLAGTAESPGELI 389 >gi|168215905|ref|ZP_02641530.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens NCTC 8239] gi|182381836|gb|EDT79315.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens NCTC 8239] Length = 355 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 33/246 (13%) Query: 78 NLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 NLA A K + + G+Q + + L +NL A++ + +K Sbjct: 30 NLASAVTKAGGIGIISGAQPGYLE-----------EDFKNNPLEANLRALKKHIRIAKEK 78 Query: 137 AHQAVH----VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL--LLKE 190 + + ++ + H+ + + + A L S + + +V + ++ Sbjct: 79 SQNGIIGVNLMVAMNNYAEHVKAAID-SGVDLIISGAGLPSHLPKFTKGSNVKIAPIVSS 137 Query: 191 VGCGLSSMDIELG----LKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + I K I G GG ES D D I Sbjct: 138 LKAA---KVILKLWDRHHKVSPDMIVIEGPKAGGHLGFTKESLEDESKKFDSTILD--II 192 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 S+ Y + I +GG+ +G DI K + LGAS +A+ F+ A DA + Sbjct: 193 KETSIYE-DKYEKKIPIIVAGGVFDGKDIAKYLKLGASGVQMATRFV--ATYECDANIKF 249 Query: 305 IESLRK 310 E+ Sbjct: 250 KEAYIN 255 >gi|88799911|ref|ZP_01115483.1| inositol-5-monophosphate dehydrogenase [Reinekea sp. MED297] gi|88777342|gb|EAR08545.1| inositol-5-monophosphate dehydrogenase [Reinekea sp. MED297] Length = 489 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 82/321 (25%), Gaps = 92/321 (28%) Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 RI + L + A+ M D KS+ L +GA Sbjct: 177 HRIEKVLVVDADFRLTGMMT------VKDIEKAKSYPNAAKDAEGRL--RVGAAVGTGAD 228 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVG 192 + V G D + + + + + ++ + + VG Sbjct: 229 TPDRVEALVKA-GVDVIIV----------DTAHGHSKGVIERVRWVKQNFPE---VDVVG 274 Query: 193 CGL-SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 + ++ ++G + G+ + + G+P ++ Sbjct: 275 GNIATAEAARDLAEAGADGVKVGIGPGSICTT------------RIVAGVGVPQVSAVAN 322 Query: 252 ARPYCNE--AQFIASGGLRNGVDILKSIILGASLG------------------------- 284 + IA GG+R D+ K+I GAS+ Sbjct: 323 VAEALKDLDIPLIADGGIRFSGDVAKAIAAGASVIMAGSMFAGTDESPGEIELFQGRAYK 382 Query: 285 ---------------GLASPFLKPAMDSSDAVV---------------AAIESLRKEFIV 314 G + + + + +V A + L Sbjct: 383 SYRGMGSLGAMSQSQGSSDRYFQTVESGVEKLVPEGIEGRIAVKGPMSAVVHQLMGGVRA 442 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M G K + E+ ++ Sbjct: 443 AMGYTGCKTIDEMRTKPQFVQ 463 >gi|150015362|ref|YP_001307616.1| 2-nitropropane dioxygenase, NPD [Clostridium beijerinckii NCIMB 8052] gi|149901827|gb|ABR32660.1| 2-nitropropane dioxygenase, NPD [Clostridium beijerinckii NCIMB 8052] Length = 355 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 37/252 (14%) Query: 54 KLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQY 113 L P+ I + GG + N A A + + +Q D Sbjct: 10 NLVAPIPI--IQGGMGIGVSSSNLA-AAVANAGGIGIISAAQLGYNEDD----------- 55 Query: 114 APHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFL------HLNPLQEIIQPNGNTN 167 L +NL A L + KA ++G + + H+ E + + Sbjct: 56 FEKNPLEANLRA--LKKHITIAKAKAVNGIIGINAMVATNNYEDHIKTAIEA-GVDLIIS 112 Query: 168 FADLSSKIALLSSAMDVPL--LLKEVGCGLSSMDIELGLK----SGIRYFDIAG--RGGT 219 A L + + + V + ++ + I I G GG Sbjct: 113 GAGLPTMLPKIVKNSSVKIAPIVSSLKAA---KVILKLWDKHDNVAPDLVVIEGPKAGGH 169 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIIL 279 ++E D D D T + A Y E + +GG+ +G DI K + L Sbjct: 170 LGFKVEELEDENLDFDKSVVDIINETK---KYAEKYNKEIPVVVAGGVFDGYDIAKYLKL 226 Query: 280 GASLGGLASPFL 291 GAS +A+ F+ Sbjct: 227 GASGVQMATRFV 238 >gi|115525364|ref|YP_782275.1| 2-nitropropane dioxygenase, NPD [Rhodopseudomonas palustris BisA53] gi|115519311|gb|ABJ07295.1| 2-nitropropane dioxygenase, NPD [Rhodopseudomonas palustris BisA53] Length = 359 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 77/262 (29%), Gaps = 47/262 (17%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKV------AMA--------VGSQRVM 98 + FP++ + M G ++ LAIAA + AM VG R Sbjct: 11 LDIEFPIIQAPMAG-------VMDAELAIAAAQGGALASLPCAMLSADKAREQVGIFRQQ 63 Query: 99 FSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN---- 154 + F + P + + ++ ++ + Sbjct: 64 VKAPINLNFFSHQAVEPDA---ARETGWRRRLTPYFEELELDPNMPAPAASRAPFDEAMC 120 Query: 155 PLQEIIQPNGNTNFADLSSK-IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 L E ++P + L + + A ++ + + G+ Sbjct: 121 ALVEELKPEVVSFHFGLPPRELLDRVKAAGCKVIASAT----IVREAIWLEEHGVDAIIA 176 Query: 214 AGRGGTSWSRIESHRD--LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 G + HR L +I P +L IASGG+ +G Sbjct: 177 QG------AEAGGHRGMFLTDNIAE------QPGLFALLPQVVDAVRVPVIASGGIADGR 224 Query: 272 DILKSIILGASLGGLASPFLKP 293 I + LGAS + + +L+ Sbjct: 225 GIAAAFALGASGVQIGTAYLRA 246 >gi|151941448|gb|EDN59812.1| dihydroorotate dehydrogenase [Saccharomyces cerevisiae YJM789] Length = 314 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 104/316 (32%), Gaps = 43/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISS----MT------GGNNKMIERINRNLAIAAEKTK-----VA 89 + +FL P + +S MT N+K I ++ + ++ Sbjct: 4 SLTTKFLNNTYENPFMNASGVHCMTTQELDELANSKAGAFITKSATTLEREGNPKPRYIS 63 Query: 90 MAVGSQRVMFSDHNAIK---SFELR--QYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVL 144 +++GS M + I S+ L + P I ++ D + + Sbjct: 64 VSLGSINSMGLPNEGIDYYLSYVLNRQKNYPDAPAIF-FSVAGMSIDENLNLLRKIQDSE 122 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE---VGCGLSSMDIE 201 L+L+ +P +F + + + PL +K + + Sbjct: 123 FNGITELNLSCPNVPGKPQVAYDFDLTKETLEKVFAFFKKPLGVKLPPYFDFAHFDIMAK 182 Query: 202 LGLKSGIRYFD-IAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTPLSLEMARPY- 255 + + + Y + I G + +E + F G PT L R + Sbjct: 183 ILNEFPLAYVNSINSIGNGLFIDVEKE-SVVVKPKNGFGGIGGEYVKPTA--LANVRAFY 239 Query: 256 ---CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 E + I +GG+++G D + ++ GAS+ + + K + V E + KE Sbjct: 240 TRLRPEIKVIGTGGIKSGKDAFEHLLCGASMLQIGTELQK------EGV-KIFERIEKEL 292 Query: 313 IVSMFLLGTKRVQELY 328 M G + + Sbjct: 293 KDIMEAKGYTSIDQFR 308 >gi|228994176|ref|ZP_04154076.1| GMP reductase [Bacillus pseudomycoides DSM 12442] gi|229000245|ref|ZP_04159814.1| GMP reductase [Bacillus mycoides Rock3-17] gi|229007767|ref|ZP_04165357.1| GMP reductase [Bacillus mycoides Rock1-4] gi|228753493|gb|EEM02941.1| GMP reductase [Bacillus mycoides Rock1-4] gi|228759577|gb|EEM08554.1| GMP reductase [Bacillus mycoides Rock3-17] gi|228765628|gb|EEM14282.1| GMP reductase [Bacillus pseudomycoides DSM 12442] Length = 327 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 91/285 (31%), Gaps = 38/285 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D SV P++ M I+ +A+ Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVTLGKHTFKLPVV-------PANMQTIIDEKIAV---- 55 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 +A + + SF ++ LI+++ ++ + A L Sbjct: 56 -YLAENKYFYIMHRFEPEKRISF-IKDMHSRG-LIASISVGVKEEEYEFVQ-QLAAEQLS 111 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 + + + + +G++N + I + + + ++ G + + Sbjct: 112 PEYITIDI--------AHGHSNA--VIKMIQHIKTHLPESFVI--AGNVGTPEAVRELEN 159 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G + G + G W + +L ++ IA G Sbjct: 160 AGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PIIADG 208 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRK 310 G+R D+ KSI GA++ + S F + + + ++ Sbjct: 209 GIRTHGDVAKSIKFGATMVMIGSLFAGHEESPGETIEKDGKLYKE 253 >gi|257051697|ref|YP_003129530.1| Glutamate synthase (ferredoxin) [Halorhabdus utahensis DSM 12940] gi|256690460|gb|ACV10797.1| Glutamate synthase (ferredoxin) [Halorhabdus utahensis DSM 12940] Length = 1510 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 32/187 (17%) Query: 179 SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVF 238 S D + +K V + K+ I+G G + + + + Sbjct: 1006 CSNTDADVHVKLVSEAGVGVIAAGVSKAKADAVLISGHDGGTGASPK----TSIKHAGLP 1061 Query: 239 QDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------- 291 + GI + + + + GGL+ G D+ + +LGA G + L Sbjct: 1062 WELGISEANQVLLENDLRSRIRVRVDGGLKTGRDVAMAALLGAEEYGFGTAPLITCGCIM 1121 Query: 292 ---------------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 + + V + + +E M LG +R+ EL Sbjct: 1122 LRKCHCNTCSVGVATQDEELREKFPGDPEFVANYMRFIAREVREIMAELGVERMDELIGR 1181 Query: 331 TALIRHQ 337 T L+ + Sbjct: 1182 TDLLAQK 1188 >gi|78211878|ref|YP_380657.1| glutamate synthase (ferredoxin) [Synechococcus sp. CC9605] gi|78196337|gb|ABB34102.1| Glutamate synthase (NADPH) [Synechococcus sp. CC9605] Length = 1533 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 34/180 (18%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 P+ +K V K+ I+G GGT S + S + S + G+ Sbjct: 1051 PVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSIKHAGSP-----WELGL 1105 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS--------------- 288 + + A GGL+ G D++ + +LGA G S Sbjct: 1106 TEVHRSLVENGLRDRVLLRADGGLKTGWDVMIAALLGAEEYGFGSIAMIAEGCVMARVCH 1165 Query: 289 ----PF--------LKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 P L+ + VV + +E M LLG R++EL T L++ Sbjct: 1166 TNNCPVGVATQKENLRKRFTGVPEHVVNFFWYVAEEVRQLMSLLGVSRLEELIGRTDLLQ 1225 >gi|320586144|gb|EFW98823.1| glutamate synthase [Grosmannia clavigera kw1407] Length = 2118 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1042 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSETGVGIVASGVAKAK 1101 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1102 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1156 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 LR G D+ + +LGA G A+ L K + Sbjct: 1157 LRTGRDVAMACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRKKFKGTP 1216 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + V E+ Sbjct: 1217 EHVINFFYYIANELRAIMAKLGFRTVNEM 1245 >gi|315032922|gb|EFT44854.1| guanosine monophosphate reductase [Enterococcus faecalis TX0017] Length = 325 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVV-------PANMQTIIDETIAETLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D A F +++ ++ + GV++ A V L Sbjct: 59 NG-----YFYIMHRFDEEARVPF-IKKMQKKGLI--------TSISVGVKEGEYAFVETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GL + + + + ++ + + I L ++ ++ G + + Sbjct: 105 AREGL------VPDYVTIDIAHGHSNAVINMIQHLKKSLPETFVI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GA++ + S F + V Sbjct: 206 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|168213912|ref|ZP_02639537.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens CPE str. F4969] gi|170714572|gb|EDT26754.1| oxidoreductase, 2-nitropropane dioxygenase family [Clostridium perfringens CPE str. F4969] Length = 355 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 33/246 (13%) Query: 78 NLAIAAEKTK-VAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK 136 NLA A K + + G+Q + + L +NL A++ + +K Sbjct: 30 NLASAVTKAGGIGIISGAQPGYLE-----------EDFKNNPLEANLRALKKHIRIAKEK 78 Query: 137 AHQAVH----VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPL--LLKE 190 + + ++ + H+ + + + A L S + + +V + ++ Sbjct: 79 SQNGIIGVNLMVAMNNYAEHVKAAID-SGVDLIISGAGLPSHLPKFTKGSNVKIAPIVSS 137 Query: 191 VGCGLSSMDIELG----LKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + I K I G GG ES D D I Sbjct: 138 LKAA---KVILKLWDRHHKVSPDMIVIEGPKAGGHLGFTKESLEDESKKFDSTILD--II 192 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 S+ Y + I +GG+ +G DI K + LGAS +A+ F+ A DA + Sbjct: 193 KETSIYE-DKYEKKIPIIVAGGVFDGKDIAKYLKLGASGVQMATRFV--ATYECDANIKF 249 Query: 305 IESLRK 310 E+ Sbjct: 250 KEAYIN 255 >gi|116328941|ref|YP_798661.1| glutamate synthase (NADH) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121685|gb|ABJ79728.1| Glutamate synthase (NADH) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 1498 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + I S + S + Sbjct: 1029 KAQVSVKLVSEAGVGTIAAGVAKANADVILISGHVGGTGAAPITSIKYAGSP-----WEL 1083 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + + + GG+ +G D++ + LGA G+ + L Sbjct: 1084 GLSETHQVLVMNGLRDRVVLRTDGGIVSGRDVIIAACLGAEEYGVGTASLVALGCIMARK 1143 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S D +V L E + LG + + E+ T L Sbjct: 1144 CHLNNCPTGIATQDIKFRAKYKGSPDQLVNLFTCLALEVREHLAELGFRSIDEIIGRTDL 1203 Query: 334 IRH 336 ++ Sbjct: 1204 LKQ 1206 >gi|116330453|ref|YP_800171.1| glutamate synthase (NADH) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124142|gb|ABJ75413.1| Glutamate synthase (NADH) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 1506 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 34/183 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + I S + S + Sbjct: 1037 KAQVSVKLVSEAGVGTIAAGVAKANADVILISGHVGGTGAAPITSIKYAGSP-----WEL 1091 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + + + GG+ +G D++ + LGA G+ + L Sbjct: 1092 GLSETHQVLVMNGLRDRVVLRTDGGIVSGRDVIIAACLGAEEYGVGTASLVALGCIMARK 1151 Query: 295 ---------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 S D +V L E + LG + + E+ T L Sbjct: 1152 CHLNNCPTGIATQDIKFRAKYKGSPDQLVNLFTCLALEVREHLAELGFRSIDEIIGRTDL 1211 Query: 334 IRH 336 ++ Sbjct: 1212 LKQ 1214 >gi|127511965|ref|YP_001093162.1| glutamate synthase subunit alpha [Shewanella loihica PV-4] gi|126637260|gb|ABO22903.1| glutamate synthase (NADPH) large subunit [Shewanella loihica PV-4] Length = 1482 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S I S + S + + Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADMITISGYDGGTGASPITSVKYAGSPWELGLAEVHQS 1054 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 +A ++ + GGL+ G D++K+ +LGA G + + Sbjct: 1055 -----LVANGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALGCKYLRICHL 1109 Query: 295 ------------------MDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ E + +E M LG ++L Sbjct: 1110 NNCATGVATQNKQLRDNHYHGLPERVMTYFEFMAREIREWMAALGVTEFEQL 1161 >gi|317490878|ref|ZP_07949314.1| inosine-5'-monophosphate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920425|gb|EFV41748.1| inosine-5'-monophosphate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 488 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 40/148 (27%), Gaps = 54/148 (36%) Query: 242 GIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL-------- 291 G+P T +S + IA GG+R DI K++ GAS + Sbjct: 314 GVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKALAAGASCVMVGGMLAGTEESPGE 373 Query: 292 -------------------------------------KPAMDSSDAVVAA---IESLRKE 311 K + + VA ++++ + Sbjct: 374 IELYQGRSFKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGHLKAIIHQ 433 Query: 312 ----FIVSMFLLGTKRVQELYLNTALIR 335 M L G + EL +R Sbjct: 434 QMGGLRSCMGLTGCATIDELRTKAEFVR 461 >gi|229069019|ref|ZP_04202312.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus F65185] gi|229177873|ref|ZP_04305246.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus 172560W] gi|228605664|gb|EEK63112.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus 172560W] gi|228714131|gb|EEL66013.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus F65185] Length = 342 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 128 IKVIGTATHVKEAKVLAELGVDIIVGQGSEAGGHRGTFIGKERDAM-----------IGT 176 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 177 FALIPQLVGAIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 222 >gi|227534404|ref|ZP_03964453.1| possible NAD-independent L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188021|gb|EEI68088.1| possible NAD-independent L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 153 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRN-- 78 RN F D ++ R L ++ D S F+G KL+ PLL + + G + + Sbjct: 66 RNTTAFTDVQMLPRVLQG--VEKPDQSTTFMGAKLASPLLTAPIAG---NTLAHPSGELG 120 Query: 79 LAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 LA A++ + M SQ F+ ++ + AP Sbjct: 121 LAKGAKEAGIMM---SQS-TFASKTIAETAAVSDGAP 153 >gi|328949768|ref|YP_004367103.1| inosine-5'-monophosphate dehydrogenase [Marinithermus hydrothermalis DSM 14884] gi|328450092|gb|AEB10993.1| inosine-5'-monophosphate dehydrogenase [Marinithermus hydrothermalis DSM 14884] Length = 489 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 71/291 (24%), Gaps = 80/291 (27%) Query: 98 MFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 D + F P L+ V +A ++ A L L+ Sbjct: 201 TLKDIVKRRQFPNAAKDPQGRLL-----VAAAVGASSDLMERAAALVEAGVDALVLDSAH 255 Query: 158 EIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRG 217 Q + + L A + + G ++ + G + Sbjct: 256 GHSQ--------GILDALVQLKEAFGDRVDV-IAGNVATAHGARALAERGADAVKVGIGP 306 Query: 218 GTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP--YCNEAQFIASGGLRNGVDILK 275 G+ + V G+P ++ A + IA GG++ D+ K Sbjct: 307 GSICTT------------RVVTGVGVPQITAIMEAVRGLEGTDVPVIADGGIKYTGDVAK 354 Query: 276 SIILGASLGGLASPFL-------------------------------------------- 291 +I GA + L Sbjct: 355 AIAAGAHTV-MLGSMLAGTEEAPGEEVLKDGRRYKSYRGMGSLGAMQRGSSDRYFQSEAK 413 Query: 292 KPAMDSSDAVV-------AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 K + + +V I + +M G ++EL LIR Sbjct: 414 KLVPEGIEGMVPYKGPVGDVIYQIVGGLRAAMGYTGCATIEELREKARLIR 464 >gi|307701874|ref|ZP_07638883.1| dihydroorotate dehydrogenase A [Streptococcus mitis NCTC 12261] gi|307616689|gb|EFN95877.1| dihydroorotate dehydrogenase A [Streptococcus mitis NCTC 12261] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-GAFERITNELKAIMSEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|289641114|ref|ZP_06473282.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca glomerata] gi|289509055|gb|EFD29986.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca glomerata] Length = 516 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 34/208 (16%) Query: 105 IKSFELRQYAPHT--------VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPL 156 +K F R+ P V+ + +G + Y AV L D H + Sbjct: 214 VKDFTKREQYPRATKDADGRLVVGAAIGVGEDAYKRAQALVRAAVDFLVVDTAHGHSRAV 273 Query: 157 QEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR 216 +++ + + + + + ++ V ++ +++G + Sbjct: 274 LDMV--------RCIKADLPTRADGSPLDVIAGNVA---TADGARALVEAGADAIKVGVG 322 Query: 217 GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDIL 274 G+ + V G+P ++ E I GG++ DI Sbjct: 323 PGSICTT------------RVVAGVGVPQITAIYECAQVAREHGIPVIGDGGMQYSGDIA 370 Query: 275 KSIILGASLGGLASPFLKPAMDSSDAVV 302 K+I +GA + L +S ++ Sbjct: 371 KAIAVGADTV-MLGSLLAGVDESPGELI 397 >gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1] gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1] Length = 481 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 63/170 (37%), Gaps = 25/170 (14%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 G +++ GV + +A ++ A + L+ Q + + + + Sbjct: 213 FGRLRVAAAIGVGQLDRAKALVEAGVDVIVLDSAHGHSQ--------GIIDTVKQIKKEL 264 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 DV ++ + G +++D +++G + G+ + + G Sbjct: 265 DVDVIAGNIATGAAALD---LIEAGADGVKVGIGPGSICTT------------RIVAGVG 309 Query: 243 IPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P +++ N+ IA GG++ D+ K++ +G S L S Sbjct: 310 VPQISAIDEVAEVANKAGVPVIADGGIKYSGDVAKALAVGGSCVMLGSAL 359 >gi|307706318|ref|ZP_07643130.1| dihydroorotate dehydrogenase family protein [Streptococcus mitis SK321] gi|307618236|gb|EFN97391.1| dihydroorotate dehydrogenase family protein [Streptococcus mitis SK321] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAVIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGYDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDRITNELKEIMAEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|260893702|ref|YP_003239799.1| TIM-barrel protein, nifR3 family [Ammonifex degensii KC4] gi|260865843|gb|ACX52949.1| TIM-barrel protein, nifR3 family [Ammonifex degensii KC4] Length = 326 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 77/246 (31%), Gaps = 45/246 (18%) Query: 57 FPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPH 116 FP++++ M G ++ A + + M +S E R++ Sbjct: 15 FPIVLAPMAGITDRAFRL-------VAREGGARLC---WTEMLPAPALARSSEARKHL-- 62 Query: 117 TVLISNLGAVQLNYDFGVQK-AHQAVHVLGADGLFLHLN---PLQEII----QPNGNTNF 168 + G V + ++ A A+ V A + + LN P+++++ + Sbjct: 63 LDFLGEEGVVAQLFGSDPEEMAEAALVVEEAGAVAVDLNMGCPVEKVVKIGAGAALLRDP 122 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLS-----SMDIELGLKSGIRYFDIAGRGGTSWSR 223 ++ + + + VP+ +K L ++G + + G Sbjct: 123 RQAAAIVEAVCRRVKVPVTVKLRKGWDEKSPPAWEMARLLEEAGAKALIVHG-------- 174 Query: 224 IESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII-LGAS 282 + DW ++ + + I +G +R D L+ + G Sbjct: 175 -----RYRHEFFGGRADW-----EAIRRVKEAV-KIPVIGNGDVRTPEDALRMLASTGCD 223 Query: 283 LGGLAS 288 + Sbjct: 224 GVMVGR 229 >gi|116628722|ref|YP_813894.1| IMP dehydrogenase/GMP reductase [Lactobacillus gasseri ATCC 33323] gi|238853027|ref|ZP_04643422.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus gasseri 202-4] gi|282852364|ref|ZP_06261706.1| IMP dehydrogenase [Lactobacillus gasseri 224-1] gi|116094304|gb|ABJ59456.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus gasseri ATCC 33323] gi|238834365|gb|EEQ26607.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus gasseri 202-4] gi|282556106|gb|EFB61726.1| IMP dehydrogenase [Lactobacillus gasseri 224-1] Length = 384 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 49/290 (16%) Query: 14 CKDPGIDRNKKFFDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNN 69 + + FDD LI LP +EV + +L PL+ + M Sbjct: 3 LWETKFAKKGLTFDDVLLIPAESHVLP----NEVKLDTKLAPNLQLHIPLISAGM----- 53 Query: 70 KMIERINRNLAIAAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLISN--- 122 + + A + V S + K+ + H + + Sbjct: 54 ---DTVTEGDMAIAMAENGGLGVIHKNLSIEAQVEEVKKAKTKAVDPNLSHPAVDTQGRL 110 Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM 182 L A + + +A+ GAD + + + + A + KI + Sbjct: 111 LAAAAVGVTSDTFERAEALLKAGADAIVI----------DTAHGHSAGVLRKIKEIRDHF 160 Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 L+ G + +G+ + G+ + + G Sbjct: 161 PKATLI--AGNVATGEGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVG 206 Query: 243 IPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 +P ++ A + + IA GG++ D++K++ G + L S F Sbjct: 207 VPQITAIYDAANVAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 256 >gi|323339843|ref|ZP_08080112.1| dihydroorotate oxidase [Lactobacillus ruminis ATCC 25644] gi|323092716|gb|EFZ35319.1| dihydroorotate oxidase [Lactobacillus ruminis ATCC 25644] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 112/319 (35%), Gaps = 48/319 (15%) Query: 41 FDEVDPSVEFLGKKLSFPLLISSMT-GGNNKMIERINRNLAIAAEKT-----------KV 88 + +V+ G L P++ +S T G +N AI + T K+ Sbjct: 1 MSDERLAVKLPGLDLKNPVMPASGTFGFGENPKYDLNELGAIVVKTTTVEARTGNPNPKI 60 Query: 89 AM-------AVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV 141 A+ AVG Q A K L+Q P +I ++G + V+ A + Sbjct: 61 ALMDNGVLNAVGLQNPGLEAVIAEKLPSLKQSYPSLPIIGSVGGSS--EEDYVEVASRLS 118 Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI-ALLSSAMDVPLLLKEVGCGLSSMDI 200 D L L+++ +++ K+ + A VP+ +K I Sbjct: 119 QSGYVDALELNISCPNVKKGGMAFGTVPEVAKKLTEEVKKASSVPVYVKLSPNVTDVCAI 178 Query: 201 ELGLKSGIRYFDIAGRGGTSWSR--------IESHRDLESDIGIVFQDWG-IPTPLSLEM 251 ++ G G G + +++ + + ++ F G +P + + Sbjct: 179 AKAVEEG-------GADGLTMINTLLGMHIDLKTRKSVLGNLTGGFSGHGVLPVAIRMIY 231 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL-ASPFLKPAMDSSDAVVAAIESLRK 310 + + I GG+ DI++ + GAS + ++ F P + ++ + L Sbjct: 232 QVAHVCDLPIIGVGGIERPEDIIEMYLAGASAVQVGSAHFDDPLI--CPHLIEKLPDLMD 289 Query: 311 EFIVSMFLLGTKRVQELYL 329 E +S ++EL Sbjct: 290 ELQIS-------SLEELRK 301 >gi|163857024|ref|YP_001631322.1| hypothetical protein Bpet2712 [Bordetella petrii DSM 12804] gi|163260752|emb|CAP43054.1| putative membrane protein [Bordetella petrii] Length = 553 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 94/312 (30%), Gaps = 62/312 (19%) Query: 27 DDWHLIHRALPEISFDEVDPSVEFLGKKLSFP-----LLISSMTGGNNKMIERINRNLAI 81 D + I+ +L D+ D V G + + P IS+M+ G + L Sbjct: 122 DRYEWINHSLVPARVDDADFRVTVGGAECTQPYSMSAFNISAMSFGALSANAIM--ALNE 179 Query: 82 AAEKTKVA--------------------MAVGSQRVMFSDHNAIKSFE--LRQYAPHTVL 119 A + A +GS D + S +R V Sbjct: 180 GARQGNFAHDTGEGGVSRYHRKAGGALVWNIGSGYFGCRDESGAFSEAAFVRNACTPQVK 239 Query: 120 ISNLGAVQ---LNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF---ADLSS 173 + + Q + + A + A G+ Q+ P+ ++ F L Sbjct: 240 MIEIKLSQGAKPGHGGILPGAKVTPEIAEARGVA----AWQDCNSPSSHSAFDTPIGLLH 295 Query: 174 KIALLSSAMDV-PLLLKE-VGCGLSSMDIELGL---KSGIRYFDIAGR-GGTSWSRIESH 227 +A L + P+ K VG I + + + G GGT + +E Sbjct: 296 FVARLRELSEGKPVGFKLCVGHPWEWFAIVKAMLETGITPDFIVVDGAEGGTGAAPVE-- 353 Query: 228 RDLESDIGIVFQDWGIPTPLSLEMARP------YCNEAQFIASGGLRNGVDILKSIILGA 281 G P +L + + + ASG + D+ +++ +GA Sbjct: 354 ---------FVDHVGTPLREALRLVHNTLIGVNLRDRIRLGASGKIITAFDMARAMAMGA 404 Query: 282 SLGGLASPFLKP 293 A F+ Sbjct: 405 DWCNAARGFMFA 416 >gi|269925620|ref|YP_003322243.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC BAA-798] gi|269789280|gb|ACZ41421.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC BAA-798] Length = 490 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 19/143 (13%) Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDL 230 + + + + DV ++ VG + E +++G + G + Sbjct: 258 VIDIVREIKARWDVDVIAGNVG---TPEGAEDLVRAGADGVKVGIGPGAICTT------- 307 Query: 231 ESDIGIVFQDWGIPTPLSLEM-ARPYCN-EAQFIASGGLRNGVDILKSIILGASLGGLAS 288 + G+P ++ AR A IA GG++ DI K+I GA + Sbjct: 308 -----RIVAGAGVPQLTAIYNCARAVAPYGATIIADGGIQYSGDIAKAIAAGADTV-MLG 361 Query: 289 PFLKPAMDS-SDAVVAAIESLRK 310 L +S + ++ E ++ Sbjct: 362 SLLAGVDESPGEVLIYQGERYKE 384 >gi|296282716|ref|ZP_06860714.1| glutamate synthase (ferredoxin) [Citromicrobium bathyomarinum JL354] Length = 1506 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 32/180 (17%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G G + + + G+ Sbjct: 1020 RVCVKLVSAAGIGTIAAGVAKAHADAILISGHTGGTGASP----QTSIKFAGTPWEMGLA 1075 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------- 288 + ++ + GGL+ G +I+ ILGA G+ + Sbjct: 1076 EVNQVLALNGLRHKVKLRVDGGLKTGREIVIGAILGAEEFGIGTMSLVAMGCIMVRQCHS 1135 Query: 289 -----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 P L+ D S + V+ ++ L ++ + LG ++E+ T L+R Sbjct: 1136 NTCPVGVCTQDPRLRAMFDGSPEKVIQLMDFLAEDVRRILAKLGVSSLEEVIGRTELLRQ 1195 >gi|257087459|ref|ZP_05581820.1| guanosine monophosphate reductase 2 [Enterococcus faecalis D6] gi|256995489|gb|EEU82791.1| guanosine monophosphate reductase 2 [Enterococcus faecalis D6] gi|315025384|gb|EFT37316.1| guanosine monophosphate reductase [Enterococcus faecalis TX2137] Length = 325 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVV-------PANMQTIIDETIAETLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D A F +++ ++ + GV++ A V L Sbjct: 59 NG-----YFYIMHRFDEEARVPF-IKKMQQKGLI--------TSISVGVKEGEYAFVETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GL + + + + ++ + + I L + ++ G + + Sbjct: 105 ALEGL------VPDYVTIDIAHGHSNAVINMIQHLKKFLPETFVI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GA++ + S F + V Sbjct: 206 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|295694695|ref|YP_003587933.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912] gi|295410297|gb|ADG04789.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912] Length = 485 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 57/223 (25%), Gaps = 70/223 (31%) Query: 167 NFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + + + ++ L+ V G + +++G + G+ + Sbjct: 254 HSKGVLDTVKAIRHKYPNLQLIAGNVATG---EGVRDLIEAGADAVKVGIGPGSICTT-- 308 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASL 283 V G+P ++ + IA GG++ DI K+I GA Sbjct: 309 ----------RVVAGIGVPQITAIYDCAAAARDYDIPIIADGGIKYSGDITKAIAAGADT 358 Query: 284 GGLASPFL--------------------------------------------KPAMDSSD 299 + L K + + Sbjct: 359 V-MIGSLLAGTEESPGEIEIYQGRSFKVYRGMGSLGAMKEGSKDRYFQEDAKKLVPEGIE 417 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + L M G + + EL +T IR Sbjct: 418 GRVPYRGPLSETVYQLIGGLRAGMGYCGVRNIHELKEDTRFIR 460 >gi|290476821|ref|YP_003469732.1| glutamate synthase, large subunit [Xenorhabdus bovienii SS-2004] gi|289176165|emb|CBJ82970.1| glutamate synthase, large subunit [Xenorhabdus bovienii SS-2004] Length = 1485 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 995 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1049 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPF------------- 290 +A ++ + GGL+ GVDI+K+ ILGA G P Sbjct: 1050 ETQQALVANGLRHKVRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 291 -------------LKPAMDSS--DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + +E M LG + + +L T L++ Sbjct: 1110 NNCATGVATQDEKLRKSHYHGLPERVINYFRFIAQETRELMAQLGIRELTDLIGRTDLLQ 1169 >gi|270290579|ref|ZP_06196803.1| guanosine monophosphate reductase [Pediococcus acidilactici 7_4] gi|304386069|ref|ZP_07368409.1| GMP reductase [Pediococcus acidilactici DSM 20284] gi|270280639|gb|EFA26473.1| guanosine monophosphate reductase [Pediococcus acidilactici 7_4] gi|304327796|gb|EFL95022.1| GMP reductase [Pediococcus acidilactici DSM 20284] Length = 325 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 86/278 (30%), Gaps = 38/278 (13%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E DP+VE P++ M IN +A Sbjct: 6 YEDIQLIPAKCVVRSRSECDPTVELGKHTFKLPVV-------PANMQTIINEEIAE---- 54 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLG 145 K+A + + +F + A + ++G YDF + A L Sbjct: 55 -KLAADGYFYIMHRFEPETRLAFVKKMKAKGLISSISVGVKDGEYDFIDEL---AAKNLV 110 Query: 146 ADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLK 205 D + + + + + + I + + ++ G + + Sbjct: 111 PDYITIDV----------AHGHAQTVIDMIHYIKEKLPESFVI--AGNVGTPEGVRELES 158 Query: 206 SGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASG 265 +G I G + G W + +L + IA G Sbjct: 159 AGADATKIGIGPGKVCIT-------KLKTGFGTGGWQLS---ALRWCAKVARK-PLIADG 207 Query: 266 GLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 G+RN DI KSI GA++ + S F + V Sbjct: 208 GIRNHGDIAKSIRFGATMVMIGSLFAGHIESPGETKVE 245 >gi|255535658|ref|YP_003096029.1| Ferredoxin-dependent glutamate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341854|gb|ACU07967.1| Ferredoxin-dependent glutamate synthase [Flavobacteriaceae bacterium 3519-10] Length = 506 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 88/268 (32%), Gaps = 62/268 (23%) Query: 84 EKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ----KAHQ 139 E + +G+ D + S + V + N+ +++ G + Sbjct: 195 EGGDLCWQIGTGYFGCRDDDGRFS---PEIFKKNVSLPNVKLIEIKLSQGAKPGHGGVLP 251 Query: 140 AVHVLGADGLFLHLNPLQEIIQPNGNTNFA---DLSSKIALLSSAMDV-PLLLKE-VGCG 194 A H+ P II P ++ F+ L + L D P+ K +G Sbjct: 252 AAKNTPEIAAIRHVRPGLTIISPPSHSAFSDAAGLLKFVQQLRELSDGKPVGFKLCIGDT 311 Query: 195 LSSMDIEL---GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSL 249 DI + L+ + I G GGT + E F D G+P +L Sbjct: 312 KEFEDICVQMNVLRIYPDFITIDGAEGGTGAAPPE------------FSDGVGMPLEPAL 359 Query: 250 EMARP------YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 ++ + IASG + +DIL+++ +GA + A F Sbjct: 360 IFVNRTLKDFNLRDKVKIIASGKVLTSLDILRAVAMGADMCNNARGF------------- 406 Query: 304 AIESLRKEFIVSMFLLGTKRVQELYLNT 331 MF LG +Q L NT Sbjct: 407 ------------MFALGC--IQALRCNT 420 >gi|308235008|ref|ZP_07665745.1| inosine 5-monophosphate dehydrogenase [Gardnerella vaginalis ATCC 14018] gi|311114687|ref|YP_003985908.1| IMP dehydrogenase [Gardnerella vaginalis ATCC 14019] gi|310946181|gb|ADP38885.1| IMP dehydrogenase [Gardnerella vaginalis ATCC 14019] Length = 376 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 20/127 (15%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG +++G + G GG + S + +++ Sbjct: 179 NLKKFIYDLDVPVI---VGGCADYTSALHLMRTGAAGILV-GFGGGAVSATMNTLGVQAP 234 Query: 234 IGIVFQDWGIPTPLS-LEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGL 286 + T +S + AR + Q IA GG+ + +K++ +GA L Sbjct: 235 MA---------TAISDVAEARRDYMDESGGRYVQIIADGGMGTSGNFIKALAMGADAVML 285 Query: 287 ASPFLKP 293 +P + Sbjct: 286 GTPLARA 292 >gi|29376923|ref|NP_816077.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis V583] gi|227553960|ref|ZP_03984007.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis HH22] gi|229549400|ref|ZP_04438125.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis ATCC 29200] gi|255972104|ref|ZP_05422690.1| guanosine monophosphate reductase 2 [Enterococcus faecalis T1] gi|256961278|ref|ZP_05565449.1| guanosine monophosphate reductase 2 [Enterococcus faecalis Merz96] gi|257416666|ref|ZP_05593660.1| guanosine monophosphate reductase 2 [Enterococcus faecalis AR01/DG] gi|257419882|ref|ZP_05596876.1| guanosine monophosphate reductase [Enterococcus faecalis T11] gi|257421930|ref|ZP_05598920.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis X98] gi|293383562|ref|ZP_06629472.1| GMP reductase [Enterococcus faecalis R712] gi|293387325|ref|ZP_06631881.1| GMP reductase [Enterococcus faecalis S613] gi|312906112|ref|ZP_07765124.1| guanosine monophosphate reductase [Enterococcus faecalis DAPTO 512] gi|312909458|ref|ZP_07768313.1| guanosine monophosphate reductase [Enterococcus faecalis DAPTO 516] gi|312953509|ref|ZP_07772348.1| guanosine monophosphate reductase [Enterococcus faecalis TX0102] gi|45476889|sp|Q831S1|GUAC_ENTFA RecName: Full=GMP reductase; AltName: Full=Guanosine 5'-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase gi|29344388|gb|AAO82147.1| GMP reductase [Enterococcus faecalis V583] gi|227176946|gb|EEI57918.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis HH22] gi|229305637|gb|EEN71633.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis ATCC 29200] gi|255963122|gb|EET95598.1| guanosine monophosphate reductase 2 [Enterococcus faecalis T1] gi|256951774|gb|EEU68406.1| guanosine monophosphate reductase 2 [Enterococcus faecalis Merz96] gi|257158494|gb|EEU88454.1| guanosine monophosphate reductase 2 [Enterococcus faecalis ARO1/DG] gi|257161710|gb|EEU91670.1| guanosine monophosphate reductase [Enterococcus faecalis T11] gi|257163754|gb|EEU93714.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis X98] gi|291079074|gb|EFE16438.1| GMP reductase [Enterococcus faecalis R712] gi|291083223|gb|EFE20186.1| GMP reductase [Enterococcus faecalis S613] gi|310627758|gb|EFQ11041.1| guanosine monophosphate reductase [Enterococcus faecalis DAPTO 512] gi|310628570|gb|EFQ11853.1| guanosine monophosphate reductase [Enterococcus faecalis TX0102] gi|311290131|gb|EFQ68687.1| guanosine monophosphate reductase [Enterococcus faecalis DAPTO 516] gi|315152000|gb|EFT96016.1| guanosine monophosphate reductase [Enterococcus faecalis TX0031] gi|315155362|gb|EFT99378.1| guanosine monophosphate reductase [Enterococcus faecalis TX0043] gi|315159062|gb|EFU03079.1| guanosine monophosphate reductase [Enterococcus faecalis TX0312] gi|315166377|gb|EFU10394.1| guanosine monophosphate reductase [Enterococcus faecalis TX1341] gi|315574339|gb|EFU86530.1| guanosine monophosphate reductase [Enterococcus faecalis TX0309B] gi|315580186|gb|EFU92377.1| guanosine monophosphate reductase [Enterococcus faecalis TX0309A] Length = 325 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVV-------PANMQTIIDETIAETLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D A F +++ ++ + GV++ A V L Sbjct: 59 NG-----YFYIMHRFDEEARVPF-IKKMQQKGLI--------TSISVGVKEGEYAFVETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GL + + + + ++ + + I L ++ ++ G + + Sbjct: 105 AREGL------VPDYVTIDIAHGHSNAVINMIQHLKKSLPETFVI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GA++ + S F + V Sbjct: 206 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|19115045|ref|NP_594133.1| glutamate synthase Glt1 (predicted) [Schizosaccharomyces pombe 972h-] gi|46395959|sp|Q9C102|GLT1_SCHPO RecName: Full=Putative glutamate synthase [NADPH]; AltName: Full=NADPH-GOGAT gi|13624762|emb|CAC36924.1| glutamate synthase Glt1 (predicted) [Schizosaccharomyces pombe] Length = 2111 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + ++G GGT + R + + G+ Sbjct: 1090 LVSEVGVGIVASGVA---KAKADHILVSGHDGGTG-----ASRWTGIKYAGLPWELGVAE 1141 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------- 294 + G +R G D+ + +LGA G A+ L Sbjct: 1142 THQTLVLNDLRGRVVIQTDGQIRTGRDVAIACLLGAEEWGFATTPLIALGCIMMRKCHLN 1201 Query: 295 -----------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + +E M LG + + E+ Sbjct: 1202 TCPVGIATQDPELRKKFEGQPEHVVNFFYYVAEELRGIMAKLGFRTINEM 1251 >gi|325677911|ref|ZP_08157553.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8] gi|324110465|gb|EGC04639.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8] Length = 493 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 31/184 (16%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLL 187 +A ++ A L L+ + + ++ + L S +VP++ Sbjct: 228 TVGMTQDILERAGALIDAQADILALDSA--------HGHSKNVIECLKKLKSNFPNVPVI 279 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 V ++ ++G + G+ + V G+P Sbjct: 280 AGNVA---TAEAARALCEAGADAIKVGIGPGSICTT------------RVVAGIGVPQIT 324 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 ++ A E IA GG++ DI+K++ GA+L L + + Sbjct: 325 AVYDAACAAAEYGIPVIADGGIKYSGDIVKALAAGANLV-----MLGSLLAGCEEAPGET 379 Query: 306 ESLR 309 E + Sbjct: 380 EIYQ 383 >gi|288904850|ref|YP_003430072.1| dihydroorotate dehydrogenase (catalytic subunit) [Streptococcus gallolyticus UCN34] gi|288731576|emb|CBI13131.1| dihydroorotate dehydrogenase (catalytic subunit) [Streptococcus gallolyticus UCN34] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 17/202 (8%) Query: 136 KAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 +AV GL L+L+ +P +F + + + + PL +K Sbjct: 111 TILKAVQDSDYQGLVELNLSCPNVPGKPQIAYDFETTETLLRDIFTYFTKPLGVKLPPYF 170 Query: 195 LSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIVFQDWGIPTPLS 248 + + + + + + G + IE ++ G + D+ PT L+ Sbjct: 171 DIAHFDRAAAIFNQFPLTFVNCINSIG-NGLIIEDETVLIKPKNGFGGIGGDYVKPTALA 229 Query: 249 LEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIE 306 A + Q I +GG++ G D + I+ GAS+ L L + A E Sbjct: 230 NVHAFYQRLNPSIQIIGTGGVKTGRDAFEHILCGASMVQL-GTILH--QEGP----AVFE 282 Query: 307 SLRKEFIVSMFLLGTKRVQELY 328 + E M G K +++ Sbjct: 283 RITNELKAIMEEKGYKSLEDFR 304 >gi|55376716|ref|YP_134567.1| inosine-5'-monophosphate dehydrogenase [Haloarcula marismortui ATCC 43049] gi|55229441|gb|AAV44861.1| inosine-5'-monophosphate dehydrogenase [Haloarcula marismortui ATCC 43049] Length = 369 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 95/303 (31%), Gaps = 55/303 (18%) Query: 28 DWHLIHRALPEISFDEVDPSVEFLGK-KLSFPLLISSMTGGNNKMIERINRNLAIAAEKT 86 D L+ + P S ++D S +L PL+ ++M + + A A + Sbjct: 12 DVLLVPKRSPVDSRSDIDLSTPLTPTVELDTPLVSAAM--------DTVTE--AELAIEL 61 Query: 87 KVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGA 146 + G + + ++ Q + AV +N D+ + A AV G Sbjct: 62 GQSGGFGVLHRFLTPEEQAE--QVEQVTEAGEQVG--AAVGINEDYVARSA--AVITAGV 115 Query: 147 DGLFL-----HLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIE 201 D L + HLN + L+ ++ G + +E Sbjct: 116 DALVVDVAHGHLNRA---------------LDAVETLADEFPDADII--AGNVATPAGVE 158 Query: 202 LGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--A 259 +G + G+ + G+P +++ + Sbjct: 159 DLAAAGADCVKVGIGPGSHCTT------------RKVAGAGVPQLTAVDDCATAAEDLDV 206 Query: 260 QFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLL 319 A GG+R D +K+++ GA L S F + + VV ++ R + M Sbjct: 207 TICADGGIRTSGDAVKALMAGADTVMLGSLF--AGTEEAPGVVVEVDGTRYKRSRGMATT 264 Query: 320 GTK 322 Sbjct: 265 AAA 267 >gi|328884502|emb|CCA57741.1| Inosine-5-monophosphate dehydrogenase [Streptomyces venezuelae ATCC 10712] Length = 500 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 30/174 (17%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 + +A + GA FL ++ + + ++ S +A + S++ V ++ Sbjct: 230 AVGASPEALERAQALAGAGVDFLVVDT--------SHGHNSNALSWMAKIKSSVGVDVIG 281 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 V + + + +G+ + G+ + V G+P + Sbjct: 282 GNVA---TRDGAQALIDAGVDGIKVGVGPGSICTT------------RVVAGIGVPQVTA 326 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + A I GGL+ DI K++ GA L + + Sbjct: 327 IYEASLAARAAGVPLIGDGGLQYSGDIGKALAAGADTV-----MLGSLLAGCEE 375 >gi|284053869|ref|ZP_06384079.1| inosine 5-monophosphate dehydrogenase [Arthrospira platensis str. Paraca] Length = 387 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 60/205 (29%), Gaps = 62/205 (30%) Query: 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRI 224 +A M +P++L G ++ +K+G + G G G + Sbjct: 179 LAEFCKNMPIPVVL---GNCVTYEVALNLMKAGAVGILVGIGPGAACTSRGVLGVGVPQA 235 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 + D + +Q+ G IA GGL G DI K I GA Sbjct: 236 TAVADCAAARDQFYQETG--------------RYVSVIADGGLITGGDICKCIACGADGV 281 Query: 285 GLASPF-----------------------------------LKPAMDSSDAVVAAIESLR 309 + SPF L+ + + +L Sbjct: 282 MIGSPFARAEESPGRGFHWGMATPSPVLPRGTRIQVGSTGTLEQILRGPAQLDDGTHNLL 341 Query: 310 KEFIVSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 342 GALKTSMGTLGAKTIKEMQQVEVVI 366 >gi|307720970|ref|YP_003892110.1| glutamate synthase (NADPH) large subunit [Sulfurimonas autotrophica DSM 16294] gi|306979063|gb|ADN09098.1| glutamate synthase (NADPH) large subunit [Sulfurimonas autotrophica DSM 16294] Length = 1479 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 35/175 (20%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDW 241 + +K V K+ I+G GGT + + S + Sbjct: 1002 KARIAVKLVSTVGVGTIAAGVAKAYADKIIISGGDGGTGAAPLSSI-----KFAGNPWEI 1056 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA------- 294 G+ + A + GGL+ G+DI+K+ +LGA + L Sbjct: 1057 GLSEAHNALKANNLRGLVEVQTDGGLKTGLDIVKAALLGAESFAFGTGVLTIVGCKMLRI 1116 Query: 295 ----------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 D V+ L ++ M LG K ++E+ Sbjct: 1117 CHVNKCSVGIATQNEKLRQEFFKGHVDQVINYFTYLAEDVRAIMAELGYKTMEEM 1171 >gi|319762647|ref|YP_004126584.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus denitrificans BC] gi|317117208|gb|ADU99696.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus denitrificans BC] Length = 491 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 41/141 (29%) Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI------------- 236 VG G +K+G+ + G S IE R ++ + Sbjct: 225 GVGEGTEERVAA-LVKAGVDAIVVDTAHGHSKGVIERVRWVKQNYPQVDVIGGNIATGAA 283 Query: 237 -------------------------VFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRN 269 + G+P ++++ IA GG+R Sbjct: 284 ALALVEAGADAVKVGIGPGSICTTRIVAGVGVPQIMAIDNVATALKGTGVPLIADGGIRF 343 Query: 270 GVDILKSIILGASLGGLASPF 290 DI K+I GAS + F Sbjct: 344 SGDIAKAIAAGASTIMMGGMF 364 >gi|262165078|ref|ZP_06032815.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus VM223] gi|262024794|gb|EEY43462.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus VM223] Length = 439 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 63/220 (28%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I +A ++ G ++ +++G+ + G+ + Sbjct: 208 GVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPGSICTT------ 259 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P ++ A E IA GG+R DI K+I GAS + Sbjct: 260 ------RIVTGVGVPQVTAIADAAGVAEEFGIPVIADGGIRFSGDISKAIAAGASCVMVG 313 Query: 288 SPFL---------------------------------------------KPAMDSSDAVV 302 S F K + + + Sbjct: 314 SMFAGTEEAPGEVILFQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRI 373 Query: 303 AA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 A ++ + + M L G+ V++L +R Sbjct: 374 AYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVR 413 >gi|259418752|ref|ZP_05742669.1| inosine-5'-monophosphate dehydrogenase [Silicibacter sp. TrichCH4B] gi|259344974|gb|EEW56828.1| inosine-5'-monophosphate dehydrogenase [Silicibacter sp. TrichCH4B] Length = 559 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + + + + + DV ++ V ++ + + +G + G+ + Sbjct: 327 HSAGVIEAVKRIKALSSDVQVIAGNVA---TAAATQALIDAGADAVKVGIGPGSICTT-- 381 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ + IA GG++ D K+I GAS Sbjct: 382 ----------RMVAGVGVPQLTAIMDCASAAGDTPVIADGGIKFSGDFAKAIAAGAS-CA 430 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 431 MVGSMIAGTDESPGEVILY 449 >gi|221633089|ref|YP_002522314.1| glutamate synthase [nadph] large chain [Thermomicrobium roseum DSM 5159] gi|221155922|gb|ACM05049.1| glutamate synthase [nadph] large chain precursor [Thermomicrobium roseum DSM 5159] Length = 1508 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 40/212 (18%) Query: 150 FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDV-----PLLLKEVGCGLSSMDIELGL 204 F H P ++I P + + + +A L + + + +K V Sbjct: 976 FRHAIPGIQLISPPPHHDIYSIED-LAQLIYDLKMVNPRARVGVKLVAEAGVGTIAAGVA 1034 Query: 205 KSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 K+ Y I+G GGT S + S V + G+ + + + Sbjct: 1035 KAHADYILISGHSGGTGASPLSSI-----KFAGVPWELGLAETQQTLVLNDLRSRVRLRT 1089 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFL----------------------------KPAM 295 GGL+ DI+ + +LGA G S L K Sbjct: 1090 DGGLQTARDIIIAALLGAEEFGFGSAALVAIGCDMARQCHLNTCPTGIATQREDLRKRFA 1149 Query: 296 DSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ L +E + +LG +R+ ++ Sbjct: 1150 GEPEHVINYFTLLAEEVREYLAMLGARRLDDI 1181 >gi|119491325|ref|ZP_01623379.1| inositol-5-monophosphate dehydrogenase [Lyngbya sp. PCC 8106] gi|119453489|gb|EAW34651.1| inositol-5-monophosphate dehydrogenase [Lyngbya sp. PCC 8106] Length = 394 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 107/376 (28%), Gaps = 91/376 (24%) Query: 25 FFDDWHLIH--RAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTGGNN-KMIERINR--- 77 D+ L+ R L P ++ D G + P++ S+M G + +M ++ Sbjct: 23 GIDEIALVPGTRTLDPGLA----DTRWTIGGIEREIPIIASAMDGVVDVQMAVLLSELGA 78 Query: 78 ----NLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFG 133 NL + + V Q + + P + Q+ G Sbjct: 79 IGVLNLEGIQTRYEDPKPVLKQIASVDKTQFVPLMQQLYAQPIQPELIKTRIEQIKSQGG 138 Query: 134 VQKAH----------QAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 + Q V GAD F+ + + DL M Sbjct: 139 IAAVSATPAGAIKFGQVVAEAGADLFFIQATVVSTAFLSADSVTPLDL----HQFCQEMP 194 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIA-GRG---------GTSWSRIESHRDLESD 233 +P++L G ++ +K+G + G G G + + D + Sbjct: 195 MPVIL---GNCVTYEVTLNLMKAGAAGVLVGIGPGAACTSRGVLGVGVPQATAVADCAAA 251 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPF--- 290 +Q+ G IA GGL G DI K I GA + SPF Sbjct: 252 REDYYQETG--------------RYVPVIADGGLITGGDICKCIACGADGVMIGSPFARA 297 Query: 291 --------------------------------LKPAMDSSDAVVAAIESLRKEFIVSMFL 318 L+ + + +L SM Sbjct: 298 KEAPGQGFHWGMATPSPVLPRGTRISVGTTGTLEQILRGPAQLDDGTHNLLGALKTSMGT 357 Query: 319 LGTKRVQELYLNTALI 334 LG K +QE+ +I Sbjct: 358 LGAKSIQEMQQVEVVI 373 >gi|329734956|gb|EGG71253.1| glutamate synthase domain protein [Staphylococcus epidermidis VCU028] Length = 525 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 88/275 (32%), Gaps = 39/275 (14%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--------GSQRVMFSD 101 LG L P I + G + + +N AI A +A A G Sbjct: 165 VLGSNLKHPFKIKRLVGQSGMSYGALGKN-AITALSMGLAKAGTWMNTGEGGLSEYHLKG 223 Query: 102 HNAI------KSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVL 144 + I F +R + + + NL F ++ A A V Sbjct: 224 NGDIIYQIGPGFFGVRDHDGNFNRDMFINLAEHNNVRAFEIKLAQGAKTRGGHMEGNKVT 283 Query: 145 GADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI- 200 ++ P + I PN N DL + + L S P+ K V + ++ Sbjct: 284 EEIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNHLQSIGQKPVGFKIVVSKVEEIEAL 343 Query: 201 ---ELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + + + + + G GGT + E + + P S+ Sbjct: 344 VKTMVEIDTYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKYGIR 398 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 N+ + ASG L I ++ LGA L +A + Sbjct: 399 NKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|325000823|ref|ZP_08121935.1| inosine-5'-monophosphate dehydrogenase [Pseudonocardia sp. P1] Length = 503 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 32/209 (15%) Query: 97 VMFSDHNAIKSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 + D N + + L P V+ + +G Y + + VL D H Sbjct: 203 ITIKDFNKTEQYPLATKDPDGRLVVAAAVGVGDDAYSRSMALVDAGIDVLMVDTAHGH-- 260 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIA 214 + +A L + + + + G + + +++G + Sbjct: 261 -------------SRRVLETVAKLRAEVGDQVDVVG-GNVATYEGAKALVEAGADAVKVG 306 Query: 215 GRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVD 272 G+ + V G P ++ A C I GG++ D Sbjct: 307 VGPGSICTT------------RVVAGVGAPQITAIYEATRACAPAGVPVIGDGGIQYSGD 354 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAV 301 + K+I GAS L S A + V Sbjct: 355 VAKAIASGASTVMLGSLLAGTAESPGEVV 383 >gi|323453694|gb|EGB09565.1| hypothetical protein AURANDRAFT_37118 [Aureococcus anophagefferens] Length = 1617 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 185 PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGI 243 + +K V K+G ++G GG+ + I S + + + + Sbjct: 1108 RISVKLVSIIGIGTVACGVAKAGADVIQVSGHDGGSGAAAISSIKHAGGPLELGLAE--- 1164 Query: 244 PTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + + A GG+R G+D++K +LGA G + + A Sbjct: 1165 --VHNTLVENGLRDGVTVRADGGVRTGLDVVKLALLGAEEFGFGTVAMVAA 1213 >gi|322412140|gb|EFY03048.1| dihydroorotate dehydrogenase 1A [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 19/204 (9%) Query: 135 QKAHQAVHVLGADGL-FLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGC 193 + +A+ +GL L+L+ +P +F + + + PL +K Sbjct: 110 ETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLESIFTYYTKPLGIKLPPY 169 Query: 194 GLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG----IPTP 246 + K + + + G + +E + F G PT Sbjct: 170 FDIVHFDQAAAIFNKYSLSFVNCVNSIG-NGLVLEDE-QVLIKPKNGFGGIGGDYIKPTA 227 Query: 247 LSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 L+ A + I +GG++ G D + I+ GAS+ + + A+ Sbjct: 228 LANVHAFYKRLKPSIHIIGTGGVKTGRDAFEHILCGASMVQIGT----ALHQEGPAI--- 280 Query: 305 IESLRKEFIVSMFLLGTKRVQELY 328 E + KE M G +R+ + Sbjct: 281 FERVTKELKTIMAEKGYQRLADFR 304 >gi|56459687|ref|YP_154968.1| inosine 5'-monophosphate dehydrogenase [Idiomarina loihiensis L2TR] gi|56178697|gb|AAV81419.1| IMP dehydrogenase [Idiomarina loihiensis L2TR] Length = 489 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 23/224 (10%), Positives = 60/224 (26%), Gaps = 74/224 (33%) Query: 170 DLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++ V ++ + +++G+ + G+ + Sbjct: 256 GVLDRVKQTRKDYPELQIIAGNVA---TAAGAKALVEAGVDAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A + IA GG+R DI K++ GA + Sbjct: 308 -------RIVTGCGVPQISAISDAVDAIKGSGVPIIADGGIRFSGDIAKALAAGAHCV-M 359 Query: 287 ASPFL------------------------------------------------KPAMDSS 298 L K + Sbjct: 360 VGSMLAGTEESPGEVELYQGRYYKSYRGMGSLGAMNQRNGSSDRYFQKSDEADKLVPEGI 419 Query: 299 DAVVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 + +A I ++ + +M L G + ++ ++ Sbjct: 420 EGRIAYKGPISAIIHQQMGGLRSAMGLTGCPTIDDMRTKPQFVK 463 >gi|330824737|ref|YP_004388040.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus denitrificans K601] gi|329310109|gb|AEB84524.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus denitrificans K601] Length = 491 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 41/141 (29%) Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI------------- 236 VG G +K+G+ + G S IE R ++ + Sbjct: 225 GVGEGTEERVAA-LVKAGVDAIVVDTAHGHSKGVIERVRWVKQNYPQVDVIGGNIATGAA 283 Query: 237 -------------------------VFQDWGIPTPLSLEMARPYC--NEAQFIASGGLRN 269 + G+P ++++ IA GG+R Sbjct: 284 ALALVEAGADAVKVGIGPGSICTTRIVAGVGVPQIMAIDNVATALKGTGVPLIADGGIRF 343 Query: 270 GVDILKSIILGASLGGLASPF 290 DI K+I GAS + F Sbjct: 344 SGDIAKAIAAGASTIMMGGMF 364 >gi|242082427|ref|XP_002445982.1| hypothetical protein SORBIDRAFT_07g029030 [Sorghum bicolor] gi|241942332|gb|EES15477.1| hypothetical protein SORBIDRAFT_07g029030 [Sorghum bicolor] Length = 275 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 17/105 (16%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K + S + ++G+ + GR G E L + + D GIP Sbjct: 113 VKVLHQVGSLEEAAKAKEAGVDGIIVQGREAGGHVIGQEGLIPLLPRVVDLVSDSGIP-- 170 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 IA+GG+ +G + ++ LGA L + FL Sbjct: 171 --------------IIAAGGIVDGRGYVAALALGAQGVCLGTRFL 201 >gi|110834991|ref|YP_693850.1| 2-nitropropane dioxygenase [Alcanivorax borkumensis SK2] gi|110648102|emb|CAL17578.1| 2-nitropropane dioxygenase, putative [Alcanivorax borkumensis SK2] Length = 333 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 73/238 (30%), Gaps = 52/238 (21%) Query: 56 SFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAP 115 P++++ M GG ++ LA A + V + + LR Sbjct: 19 ELPIMLAGM-GGVSR------HQLAAAVNQAG-GFGVLGMVREPVERIRQEVEALRAIN- 69 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKI 175 NL + + A L L ++ F D+ + + Sbjct: 70 DGPFAVNLIPAATERRLLMDQV--------ATCLALQVDAF---------VFFWDVDTGL 112 Query: 176 ALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGR--GGTSWSRIESHRDLESD 233 ++ +VG + D +L +G + G GG R Sbjct: 113 VQYLKQEGKQVIY-QVG---NQRDADLAQSAGADVLIVQGHEAGG-------HVR----- 156 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 G LSL ++ +ASGG+ +G +L + +GA L S FL Sbjct: 157 --------GTTATLSLLPQVVANSDVPVVASGGIASGGAMLAAFSMGAQGVSLGSAFL 206 >gi|315150274|gb|EFT94290.1| dihydroorotate dehydrogenase 1A [Enterococcus faecalis TX0012] Length = 322 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 44/316 (13%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNA 104 D SVEF KL+ L+ ++ +G + I+ ++ A A A + R + Sbjct: 13 DISVEFSEHKLANVLM-NA-SGIHCMTIKEMDELAASQAGAFVAKTATPNPRQGNEEPRY 70 Query: 105 IKSFELRQYAPHTVLISNLGA-------VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ 157 + L + NLG + +F + +V + + L +Q Sbjct: 71 FDT-PLGSINSMG--LPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQ 127 Query: 158 EI----------------IQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---M 198 E +P +F + + PL +K + Sbjct: 128 ESEYTGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDA 187 Query: 199 DIELGLKSGIRYFDIAGRGGTSW----SRIESHRDLESDIGIVFQDWGIPTPLS--LEMA 252 E+ K + Y + G + E + G + ++ PT L+ A Sbjct: 188 MAEILNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFA 247 Query: 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 + E + I +GG+ G D+ + ++ GA+L + + + + E L KE Sbjct: 248 QRLKPEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQ---EGP----QVFERLAKEL 300 Query: 313 IVSMFLLGTKRVQELY 328 M G + ++E Sbjct: 301 QEIMAAKGYESIEEFR 316 >gi|257092150|ref|YP_003165791.1| ferredoxin-dependent glutamate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044674|gb|ACV33862.1| ferredoxin-dependent glutamate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 510 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 92/279 (32%), Gaps = 39/279 (13%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVG---------SQR 96 + F G+ L + IS+M+ G R L+ A + G Sbjct: 131 CATPFAGRSL---VNISAMSFGAISRPAV--RALSRGAASAGCWLDTGEGGLSPGHLDGG 185 Query: 97 VMFSDHNAIKSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQAV---------HVLG 145 + +R H + L A F ++ + A + + Sbjct: 186 CDIIFQIGTAKYGVRDENGHLSDPRLCELAAQATVRAFEIKLSQGAKPGKGGVLLGNKVT 245 Query: 146 ADGLFLHLNP-LQEIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEVGCG------L 195 + + P ++ + PN + + AD L + + + P+ +K G L Sbjct: 246 PEIAAIRGIPEGRDSLSPNRHRDIADIDQLLDLVEHVRALTGKPVGVKTAIGGDQFLKDL 305 Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ GL++ + I G G S + ++ +D + D +P + +A Sbjct: 306 AAAVARRGLQAAPDFLTIDGGEGGSGAAPQA----LADHMALSIDEALPLVVDALIASGL 361 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 + + IA+G L + ++ GA A F+ Sbjct: 362 RDRIRVIAAGQLVTPARVAWALAAGADFVNTARGFMFAL 400 >gi|94496192|ref|ZP_01302770.1| glutamate synthase [NADPH] large chain precursor [Sphingomonas sp. SKA58] gi|94424371|gb|EAT09394.1| glutamate synthase [NADPH] large chain precursor [Sphingomonas sp. SKA58] Length = 1513 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 67/218 (30%), Gaps = 38/218 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL--SSAMD--VPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + +K V K+ Sbjct: 989 HSTPGVTLISPPPHHDIYSIEDLAQLIYDCKMINPRARVCVKLVSQAGIGTVAAGVAKAH 1048 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 +AG GGT S + G+ + + + GG Sbjct: 1049 ADVILVAGHVGGTGASP-----QTSIKYAGTPWEMGLSEANQVLTLNGLRHRVKLRTDGG 1103 Query: 267 LRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSS 298 L+ G DI+ + ILGA G+ + L + Sbjct: 1104 LKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQCHSNTCPVGVCVQDEKLRQKFTGTP 1163 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + V+ + + +E + LG + + E+ T L++ Sbjct: 1164 EKVINLMTFIAEEVREILARLGFRSLDEVIGRTELLKQ 1201 >gi|294630970|ref|ZP_06709530.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14] gi|292834303|gb|EFF92652.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14] Length = 500 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 56/174 (32%), Gaps = 30/174 (17%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLL 188 + +A + A FL ++ + + ++ S +A + S++ + ++ Sbjct: 230 AVGASPEALERAQALAEAGADFLVVDT--------SHGHNSNALSWMAKIKSSVSIDVIG 281 Query: 189 KEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS 248 V + + + +G+ + G+ + V G+P + Sbjct: 282 GNVA---TRDGAQALIDAGVDGIKVGVGPGSICTT------------RVVAGIGVPQVTA 326 Query: 249 LEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDA 300 + A I GGL+ DI K++ GA L + + Sbjct: 327 IYEAALAARPAGIPVIGDGGLQYSGDIGKALAAGADTV-----MLGSLLAGCEE 375 >gi|262274950|ref|ZP_06052761.1| glutamate synthase [NADPH] large chain [Grimontia hollisae CIP 101886] gi|262221513|gb|EEY72827.1| glutamate synthase [NADPH] large chain [Grimontia hollisae CIP 101886] Length = 1403 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + + Sbjct: 913 VSVKLVSEPGVGTIAVGVAKAYADLITISGYDGGTGASPLTSVKYAGSPWELGLAE---- 968 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 T +L + ++ + GGL+ G+DI+K+ ILGA G +P + Sbjct: 969 TQQAL-VTNGLRHKIRLQVDGGLKTGLDIIKATILGAESFGFGTAPMVALGCKYLRICHL 1027 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ + L +E M LG +++ +L T L+ Sbjct: 1028 NNCATGVATQDDTLRREYFKGLPEQVMNFFKGLGEEVRELMAQLGVEKLTDLIGRTDLLE 1087 >gi|307637543|gb|ADN79993.1| GMP reductase [Helicobacter pylori 908] gi|325996134|gb|ADZ51539.1| GMP reductase [Helicobacter pylori 2018] gi|325997730|gb|ADZ49938.1| Guanosine 5' monophosphate oxidoreductase [Helicobacter pylori 2017] Length = 325 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 85/281 (30%), Gaps = 44/281 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M IN ++A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIV-------PANMQTIINESIAEFLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQ---AVH 142 + + F +++ ++ S V+ V++ + A Sbjct: 59 NG-----YFYIMHRFNGAKRIPF-VKKMKKRQLISSISVGVKKEECLFVEELAKQGLAPD 112 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + E+IQ + + + ++ G + + Sbjct: 113 YITIDIAHGHSNSVIEMIQ---------------RIKTRLPETFVI--AGNVGTPEAVRE 155 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + G W + +L + I Sbjct: 156 LENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PII 204 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 A GG+R DI KSI GA++ + S F S + + Sbjct: 205 ADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIE 245 >gi|254481805|ref|ZP_05095048.1| hypothetical protein GPB2148_1496 [marine gamma proteobacterium HTCC2148] gi|214037934|gb|EEB78598.1| hypothetical protein GPB2148_1496 [marine gamma proteobacterium HTCC2148] Length = 508 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 86/261 (32%), Gaps = 32/261 (12%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAA-----EKTKVAMAVGSQRVMFSDHNAIKSFE 109 LS P I++++ G +K +N + V +G+ + D S + Sbjct: 162 LSAPA-IAALSTGASKAGIWLNTGEGAISPYHLKGGCDVIFQIGTAKYGVRDQTGNLSDD 220 Query: 110 -LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 LR+ A H + + G A V + ++ + PN + + Sbjct: 221 KLREIAAHEQVRMFEIKLSQGAKPGKGGILPAAKVTEVIASTRGIPAGEDSLSPNRHPDI 280 Query: 169 A---DLSSKIALLSSAMDVPLLLKEVGCGLSSMD------IELGLKSGIRYFDIAGRGGT 219 + DL I + P +K V + +D + GL +F + G Sbjct: 281 SSIADLLEMIHRVRQVTGKPTGIKAVIGQSAWLDELFQAIQDKGLDYAPDFFTVDSADGG 340 Query: 220 SWSRIESHRDLESDIGIVFQDWGIPTPLSL------EMARPYCNEAQFIASGGLRNGVDI 273 + + +S D G+P SL + + + I SG + N + Sbjct: 341 TGAAPQSLIDFM----------GLPVKRSLPLVVDKLVEYGLRDRIRVICSGKMINPAGV 390 Query: 274 LKSIILGASLGGLASPFLKPA 294 ++ LGA A F+ Sbjct: 391 AAALCLGADCVNSARGFMFAL 411 >gi|209963502|ref|YP_002296417.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW] gi|209956968|gb|ACI97604.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW] Length = 496 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 67/195 (34%) Query: 196 SSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY 255 ++ + +G + G+ + + G+P ++ Sbjct: 288 TAEGARSLIDAGADAIKVGIGPGSICTT------------RIVAGVGVPQLTAIMDVVEE 335 Query: 256 CN--EAQFIASGGLRNGVDILKSIILGASLGGLASPF----------------------- 290 C+ IA GG++ D+ K+I GA + L S F Sbjct: 336 CHRQGIPVIADGGIKYSGDLAKAIAGGADVAMLGSLFAGTDESPGEVILFQGRSYKSYRG 395 Query: 291 -----------------------LKPAMDSSDAVV-------AAIESLRKEFIVSMFLLG 320 LK + + V A I L +M G Sbjct: 396 MGSVGAMARGSADRYFQAEVSNTLKLVPEGVEGRVPYKGPIGAVIHQLVGGLRAAMGYTG 455 Query: 321 TKRVQELYLNTALIR 335 +QE+ T +R Sbjct: 456 CATIQEMQTKTRFVR 470 >gi|308174900|ref|YP_003921605.1| GMP reductase [Bacillus amyloliquefaciens DSM 7] gi|307607764|emb|CBI44135.1| GMP reductase [Bacillus amyloliquefaciens DSM 7] gi|328913217|gb|AEB64813.1| GMP reductase [Bacillus amyloliquefaciens LL3] Length = 326 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 87/280 (31%), Gaps = 44/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAI-AAE 84 ++D LI S E D SV G P++ M I+ N+A AE Sbjct: 7 YEDIQLIPAKCIVNSRSECDTSVTLGGHTFKLPVV-------PANMQTVIDENIAAWLAE 59 Query: 85 KTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQ-KAHQAV-H 142 + + +F A + ++G + +Y+F + KA Q V Sbjct: 60 NGYF------YIMHRFEPEKRLAFVQDMKARGLISSISVGVKENDYEFIRELKAQQLVPD 113 Query: 143 VLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 + D H N + S I + + ++ G + + Sbjct: 114 YITIDIAHGHSNA---------------VISMIQFIKEHVPESFVI--AGNVGTPEAVRE 156 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 ++G + G + G W + +L ++ I Sbjct: 157 LERAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAASK-PII 205 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVV 302 A GG+R DI KSI GAS+ + S F V Sbjct: 206 ADGGIRTHGDIAKSIRFGASMVMIGSLFAGHEESPGQTVE 245 >gi|294086050|ref|YP_003552810.1| inosine-5'-monophosphate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665625|gb|ADE40726.1| inosine-5'-monophosphate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] Length = 506 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 71/261 (27%), Gaps = 79/261 (30%) Query: 131 DFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLK 189 GV +A ++ A + ++ Q + + + + V ++ Sbjct: 242 GAGVDGIARAEALMDAGADVIIVDTAHGHSQ--------GVLETVTKVRKLANHVQVIGG 293 Query: 190 EVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 V ++ + + +G I G+ + + G+P ++ Sbjct: 294 NVA---TADGAKALMDAGADAVKIGIGPGSICTT------------RMVAGVGVPQLTAI 338 Query: 250 EMARPYC--NEAQFIASGGLRNGVDILKSIILGASLG----------------------- 284 A C N+ IA GG++ D+ K+I G + Sbjct: 339 MEASEACHANDVPVIADGGIKYSGDLAKAIAAGGDVAMIGSLLAGTDETPGEVYLHQGRS 398 Query: 285 -----------GLAS------------PFLKPAMDSSD-------AVVAAIESLRKEFIV 314 +A LK + + AV + L Sbjct: 399 YKSYRGMGSTGAMARGSADRYFQAEITQPLKLVPEGIEGQVPYKGAVENVLHQLLGGLRA 458 Query: 315 SMFLLGTKRVQELYLNTALIR 335 +M G + +L N +R Sbjct: 459 AMGYTGNANIADLQANANFLR 479 >gi|290580909|ref|YP_003485301.1| putative dihydroorotate dehydrogenase dihydroorotate oxidase [Streptococcus mutans NN2025] gi|254997808|dbj|BAH88409.1| putative dihydroorotate dehydrogenase dihydroorotate oxidase [Streptococcus mutans NN2025] Length = 330 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 20/211 (9%) Query: 130 YDFGVQKAHQAVHVLGAD----GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 ++ H + ++ A + L+L+ +P +F ++ + + P Sbjct: 121 VGMSPEETHTILKMVEASKYQGLVELNLSCPNVPGKPQIAYDFETTDQILSEVFTYFTKP 180 Query: 186 LLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIVFQ 239 L +K + K + + + G + IE ++ G + Sbjct: 181 LGIKLPPYFDIVHFDQAAAIFNKYPLTFVNCINSIG-NGLVIEDETVVIKPKNGFGGIGG 239 Query: 240 DWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 D+ PT L+ A + Q I +GG++ G D + I+ GAS+ + + + + Sbjct: 240 DYVKPTALANVHAFYKRLNPSIQIIGTGGVKTGRDAFEHILCGASMVQIGTALHQ---EG 296 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + + KE M G + +++ Sbjct: 297 P----QIFKRITKELKAIMTEKGYETLEDFR 323 >gi|218290797|ref|ZP_03494874.1| 2-nitropropane dioxygenase NPD [Alicyclobacillus acidocaldarius LAA1] gi|218239232|gb|EED06432.1| 2-nitropropane dioxygenase NPD [Alicyclobacillus acidocaldarius LAA1] Length = 361 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 81/280 (28%), Gaps = 48/280 (17%) Query: 55 LSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAM-AVGSQRVMFSDHNAIKSFELRQY 113 + P+ + M GG + +A + + VG S + + Sbjct: 13 VHHPIFAAPMAGGPSTP-----ELVAAVSNAGGLGFLGVG----YLSPEETRAAIRRVRA 63 Query: 114 APHTVLISNLGAVQLNYDFGVQKA-------HQAVHVLGADGLFLHLNP---LQEIIQPN 163 N+ + + V+ GA ++P + Sbjct: 64 LTDAPFGVNVFIPETPGKDARDAVIAMKIWLREWVNDPGAAAEIDAIDPRFPTSATFEAQ 123 Query: 164 GNTNFADLSSKIALLSSAMDVP-----LLLKE-----VGCGLSSMDIELGLKSGIRYFDI 213 + L ++ ++S P KE +G + + ++G Sbjct: 124 MDVI---LEERVPVVSFTFGCPEADTIAKWKEAGACVIGTATTPEEAVALERAGCDAIVA 180 Query: 214 AG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 G GG + + D IG + +L IA+GG+ +G Sbjct: 181 QGYEAGGHRGTFLPM--DETRLIGTL----------ALVPQVVDRVRIPVIAAGGIMDGR 228 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSD-AVVAAIESLRK 310 I+ + LGA+ + + FL + A A++ Sbjct: 229 GIVACLALGAAAVQMGTSFLVADESGAHPAYKRAVKEWLD 268 >gi|149025817|gb|EDL82060.1| rCG28563 [Rattus norvegicus] Length = 557 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 109/368 (29%), Gaps = 106/368 (28%) Query: 41 FDEVDPSVEFLGKKLSFPL-LISSMTGGNNKMIERINRNLAIAAEKTKVAMAV------- 92 D VD SVE G + P L S+ + MI R A + A+ Sbjct: 60 VDLVDISVEMAGLRFPNPFGLASATPATSTPMIRR--------AFEAGWGFALTKTFSLD 111 Query: 93 -------------GSQRVMFSDHNAIKSF-------------------ELRQYAPHTVLI 120 G+ SF EL+ P +LI Sbjct: 112 KDIVTNVSPRIIRGTTSGPLYGPGQ-SSFLNIELISEKTAAYWCHSVTELKADFPDNILI 170 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ----------PNGNTNFAD 170 +++ D+ + + GAD L L+L+ + + P N Sbjct: 171 ASIMCSYNKNDW--MELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICR 228 Query: 171 LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFD----IAG-----RGGTS 220 + ++ VP K + I + G ++G G+ Sbjct: 229 W------VRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSP 282 Query: 221 WSRIESHRDLESDIGIVFQDWGIP-TPL------SLEMARPYCNEAQFIASGGLRNGVDI 273 W + S + G+ T + ++ +A+GG+ + Sbjct: 283 WPSVGSGKRTTYG--------GVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESG 334 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY----L 329 L+ + GAS+ + A+ + D V IE ++L K ++EL Sbjct: 335 LQFLHSGASVLQVC-----SAIQNQDFTV--IEDYCTGLKALLYL---KSIEELSDWDGQ 384 Query: 330 NTALIRHQ 337 + + HQ Sbjct: 385 SPPTMSHQ 392 >gi|119469566|ref|ZP_01612470.1| glutamate synthase, large subunit [Alteromonadales bacterium TW-7] gi|119447101|gb|EAW28371.1| glutamate synthase, large subunit [Alteromonadales bacterium TW-7] Length = 1485 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S + S + + Sbjct: 995 VSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTGASPLTSVKYAGSPWELGLAE---- 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFL------------ 291 T +L + + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 TQQALVE-NGLRHRIRLQTDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1109 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K + + + + +E M LG + +L Sbjct: 1110 NNCATGVATQDETLRQKHYHGLPEMAMNYFKFIAQEAREIMASLGVANLTDL 1161 >gi|24379073|ref|NP_721028.1| dihydroorotate dehydrogenase 1A [Streptococcus mutans UA159] gi|24376971|gb|AAN58334.1|AE014903_10 putative dihydroorotate dehydrogenase; dihydroorotate oxidase [Streptococcus mutans UA159] Length = 311 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 20/211 (9%) Query: 130 YDFGVQKAHQAVHVLGAD----GLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 ++ H + ++ A + L+L+ +P +F ++ + + P Sbjct: 102 VGMSPEETHTILKMVEASKYQGLVELNLSCPNVPGKPQIAYDFETTDQILSEVFTYFTKP 161 Query: 186 LLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGGTSWSRIESH---RDLESDIGIVFQ 239 L +K + K + + + G + IE ++ G + Sbjct: 162 LGIKLPPYFDIVHFDQAAAIFNKYPLTFVNCINSIG-NGLVIEDETVVIKPKNGFGGIGG 220 Query: 240 DWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDS 297 D+ PT L+ A + Q I +GG++ G D + I+ GAS+ + + + + Sbjct: 221 DYVKPTALANVHAFYKRLNPSIQIIGTGGVKTGRDAFEHILCGASMVQIGTALHQ---EG 277 Query: 298 SDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + + KE M G + +++ Sbjct: 278 P----QIFKRITKELKAIMTEKGYETLEDFR 304 >gi|258619964|ref|ZP_05715004.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM573] gi|258627196|ref|ZP_05721984.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM603] gi|262172163|ref|ZP_06039841.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus MB-451] gi|258580498|gb|EEW05459.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM603] gi|258587697|gb|EEW12406.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM573] gi|261893239|gb|EEY39225.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus MB-451] Length = 487 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 63/220 (28%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I +A ++ G ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P ++ A E IA GG+R DI K+I GAS + Sbjct: 308 ------RIVTGVGVPQVTAIADAAGVAEEFGIPVIADGGIRFSGDISKAIAAGASCVMVG 361 Query: 288 SPFL---------------------------------------------KPAMDSSDAVV 302 S F K + + + Sbjct: 362 SMFAGTEEAPGEVILFQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRI 421 Query: 303 AA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 A ++ + + M L G+ V++L +R Sbjct: 422 AYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVR 461 >gi|237736459|ref|ZP_04566940.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium mortiferum ATCC 9817] gi|229421501|gb|EEO36548.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium mortiferum ATCC 9817] Length = 486 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 60/184 (32%), Gaps = 26/184 (14%) Query: 129 NYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLL 187 G + ++ A + ++ + +KI + +A ++ L+ Sbjct: 225 AVGIGPDTLERVAALVKAGVDIITVDSAHGHSM--------GVINKIKEIKAAFPNLNLI 276 Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL 247 G +++ +++G+ + G+ + V G+P Sbjct: 277 G---GNIVTAEAALDLIEAGVDAVKVGIGPGSICTT------------RVVAGVGVPQLT 321 Query: 248 SLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAI 305 ++ C + IA GG++ DI+K++ GA L + ++ Sbjct: 322 AVNDVYQVCKDRGIGVIADGGIKLSGDIVKALAAGADCVMLGGLLAGTKEAPGEEIILEG 381 Query: 306 ESLR 309 + + Sbjct: 382 KRFK 385 >gi|327295645|ref|XP_003232517.1| glutamate synthase [Trichophyton rubrum CBS 118892] gi|326464828|gb|EGD90281.1| glutamate synthase [Trichophyton rubrum CBS 118892] Length = 2121 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 66/227 (29%), Gaps = 38/227 (16%) Query: 142 HVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSS 197 V G H P +I P + + + L+ S + +K V Sbjct: 1029 KVTGPIAHTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRARVSVKLVSEVGVG 1088 Query: 198 MDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + K+ + IAG GGT + R + + G+ + Sbjct: 1089 IVASGVAKAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLR 1143 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLAS---------------------------P 289 G LR G DI +LGA G A+ P Sbjct: 1144 GRVIVQTDGQLRTGRDIAIGCLLGAEEWGFATAPLIAMGCVMMRKCHLNTCPVGIATQDP 1203 Query: 290 FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 L+ + + V+ + E M LG + V E+ L++ Sbjct: 1204 VLREKFQGTPEHVINFFYYVANELRAIMAKLGFRNVNEMVGRAELLK 1250 >gi|325287666|ref|YP_004263456.1| Glutamate synthase (NADPH) [Cellulophaga lytica DSM 7489] gi|324323120|gb|ADY30585.1| Glutamate synthase (NADPH) [Cellulophaga lytica DSM 7489] Length = 526 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 11/140 (7%) Query: 156 LQEIIQPNGNTNFAD---LSSKIALLSSAMDVPLLLKEVGCGLSS----MDIELGLKSGI 208 ++++ P + F+ L + I ++ +P+ +K L DI L G Sbjct: 267 GKDVLSPATHKAFSSVQELVNLIEEIAEKTGLPVGIKGAIGKLDQWEELADIMLKTGKGP 326 Query: 209 RYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 + + G G + + S +D + +G + L + + + FI SG L Sbjct: 327 DFITVDGGEGGTGAAPPSF----ADHVSLPWVYGFSSLYKLFLEKKLTDRIVFIGSGKLG 382 Query: 269 NGVDILKSIILGASLGGLAS 288 + +G +A Sbjct: 383 FPAKAAMAFAMGVDCINVAR 402 >gi|311111548|ref|ZP_07712945.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus gasseri MV-22] gi|311066702|gb|EFQ47042.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus gasseri MV-22] Length = 381 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 49/278 (17%) Query: 26 FDDWHLIH---RALPEISFDEVDPSVEFL-GKKLSFPLLISSMTGGNNKMIERINRNLAI 81 FDD LI LP +EV + +L PL+ + M + + Sbjct: 12 FDDVLLIPAESHVLP----NEVKLDTKLAPNLQLHIPLISAGM--------DTVTEGDMA 59 Query: 82 AAEKTKVAMAV----GSQRVMFSDHNAIKSFELRQYAPHTVLISN---LGAVQLNYDFGV 134 A + V S + K+ + H + + L A + Sbjct: 60 IAMAENGGLGVIHKNLSIEAQVEEVKKAKTKAVDPNLSHPAVDTQGRLLAAAAVGVTSDT 119 Query: 135 QKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCG 194 + +A+ GAD + + + + A + KI + L+ G Sbjct: 120 FERAEALLKAGADAIVI----------DTAHGHSAGVLRKIKEIRDHFPKATLI--AGNV 167 Query: 195 LSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 + +G+ + G+ + + G+P ++ A Sbjct: 168 ATGEGTAALFDAGVDVVKVGIGPGSICTT------------RIVAGVGVPQITAIYDAAN 215 Query: 255 YCNEA--QFIASGGLRNGVDILKSIILGASLGGLASPF 290 + + IA GG++ D++K++ G + L S F Sbjct: 216 VAQKYGKKIIADGGIKYSGDVVKALAAGGNAVMLGSMF 253 >gi|294651767|ref|ZP_06729065.1| glutamate synthase alpha subunit [Acinetobacter haemolyticus ATCC 19194] gi|292822324|gb|EFF81229.1| glutamate synthase alpha subunit [Acinetobacter haemolyticus ATCC 19194] Length = 1494 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1008 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1063 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1122 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + + +E + LG +++L Sbjct: 1123 NNCATGVATQQDHLRQEHYIGEPQMLINFFKFIAEETREWLAALGVSSLKDL 1174 >gi|212697476|ref|ZP_03305604.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM 7454] gi|212675475|gb|EEB35082.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM 7454] Length = 483 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 36/211 (17%) Query: 97 VMFSDHNAIKSFEL--RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLN 154 + D + + R ++ + +G Q D V V+ D H Sbjct: 194 ITIKDIEKSRQYPNSARDEHDRLLVGAAVGITQDMMDRIDALVEAKVDVVTVDTAHGH-- 251 Query: 155 PLQEIIQPNGNTNFADLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDI 213 + + I + + D+ ++ V G + +++G+ + Sbjct: 252 -------------SKGVMTAIKKIKAKYPDLQVIAGNVATG---EAAKDLIEAGVDAVKV 295 Query: 214 AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGV 271 G+ + V G+P ++ E IA GG++ Sbjct: 296 GIGPGSICTT------------RVVTGVGVPQISAIIDCVKAAKEYEIPVIADGGIKYSG 343 Query: 272 DILKSIILGASLGGLASPFLKPAMDSSDAVV 302 DI K++ GAS+ +A +S + Sbjct: 344 DITKALACGASVI-MAGSLFAGTEESPGETI 373 >gi|197117159|ref|YP_002137586.1| inosine-5'-monophosphate dehydrogenase [Geobacter bemidjiensis Bem] gi|197086519|gb|ACH37790.1| inosine-5'-monophosphate dehydrogenase [Geobacter bemidjiensis Bem] Length = 489 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 62/221 (28%), Gaps = 69/221 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + IA + S L+ G ++ E +K+G+ + G+ + Sbjct: 256 GVIDTIARIKSDFPGLELV--AGNIATADAAEALIKAGVDAIKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 V G+P ++ + IA GG++ D+ K++ GA + + Sbjct: 308 ------RVVAGIGVPQITAIAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMIG 361 Query: 288 SPF----------------------------------------------LKPAMDSSDA- 300 S F +K + + Sbjct: 362 SLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKDRYFQSDVDSDVKLVPEGIEGM 421 Query: 301 ------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + A + L M G++ + EL N +R Sbjct: 422 VPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVR 462 >gi|153217377|ref|ZP_01951128.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 1587] gi|124113608|gb|EAY32428.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 1587] Length = 413 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I +A ++ G ++ +++G+ + G+ + Sbjct: 182 GVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPGSICTT------ 233 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P ++ A NE IA GG+R DI K+I GAS + Sbjct: 234 ------RIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 287 Query: 288 SPFL---------------------------------------------KPAMDSSDAVV 302 S F K + + + Sbjct: 288 SMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRI 347 Query: 303 AA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 A ++ + + M L G+ V++L +R Sbjct: 348 AYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVR 387 >gi|254476750|ref|ZP_05090136.1| ferredoxin-dependent glutamate synthase [Ruegeria sp. R11] gi|214030993|gb|EEB71828.1| ferredoxin-dependent glutamate synthase [Ruegeria sp. R11] Length = 497 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 92/301 (30%), Gaps = 44/301 (14%) Query: 31 LIHRALPEISFDEVDPSVEFLGKKLSFPLL------ISSMTGGNNKMIERINRNLAIAAE 84 ++ A P + + + +G P + IS M+ G R L+ A+ Sbjct: 111 FVNAAFPALDTGKAESEPLLIGPTARTPYMAPSFFNISGMSYGALSAPAV--RALSRGAK 168 Query: 85 KTKV--------------------AMAVGSQRVMFSDHNAIKSFE-LRQYAPHTVLISNL 123 + V +G+ + D S E LR+ A H + Sbjct: 169 EAGVWYNTGEGGLSPFHLEGGCDVVFQIGTAKYGVRDAEGRLSDEQLRKVASHDSVRMFE 228 Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTN---FADLSSKIALLSS 180 + G V + ++ I PN + + +L IA + Sbjct: 229 LKLAQGAKPGKGGILPGAKVNKQIAEIRGIPEGEDSISPNRHPEIGTYDELLDMIAHVRE 288 Query: 181 AMDVPLLLKEV---GCGLSSMDIELGL---KSGIRYFDI-AGRGGTSWSRIESHRDLESD 233 P+ +K V L M + + S + + G GGT + + + Sbjct: 289 ITGKPVGIKLVVGAEAALREMFLHIAARKDDSAPDFITVDGGEGGTGAAPMPLIDLVGMS 348 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 + P +L + + IASG L N D+ ++ GA A F+ Sbjct: 349 VREAL-----PLVCNLRDEYGLRDRIRLIASGKLVNPGDVAWALAAGADFVTSARGFMFS 403 Query: 294 A 294 Sbjct: 404 L 404 >gi|304396311|ref|ZP_07378192.1| Glutamate synthase (ferredoxin) [Pantoea sp. aB] gi|304355820|gb|EFM20186.1| Glutamate synthase (ferredoxin) [Pantoea sp. aB] Length = 1843 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1128 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1187 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A ++ SG + G Sbjct: 1188 VAGNTGGTGAASVTSLKYTGR-----VAEIGIAEVHQALCANGLRDKVLLRCSGAQQTGS 1242 Query: 272 DILKSIILGAS---LGGLASPFLK-------------PAMDSSDA-------VVAAIESL 308 D++KS +LG G A LK +++A + ++ Sbjct: 1243 DVVKSALLGGDSFEFGTTALMMLKCVMAKNCNVKCPAGLTTNAEAFDGDPRQLAQYFLNV 1302 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + +G + ++E + L+ Sbjct: 1303 AHEVREILARMGLRSLREARGRSDLLH 1329 >gi|289641113|ref|ZP_06473281.1| IMP dehydrogenase family protein [Frankia symbiont of Datisca glomerata] gi|289509054|gb|EFD29985.1| IMP dehydrogenase family protein [Frankia symbiont of Datisca glomerata] Length = 372 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 32/113 (28%), Gaps = 35/113 (30%) Query: 259 AQFIASGGLRNGVDILKSIILGASLGGLASPF---------------------------- 290 IA GG+R G DI K+I GA L P Sbjct: 257 VHVIAHGGVRTGGDIAKAIACGADAVMLDKPLAAAAEAPGRGGYWSMDLLHSRLPRGTWE 316 Query: 291 -------LKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 L+ + +V +L +M G ++EL L+ Sbjct: 317 PVAVAGTLREILLGPASVNPGTLNLAGALRTAMATTGYATLKELQKADVLVTG 369 >gi|260550839|ref|ZP_05825046.1| glutamate synthase large subunit [Acinetobacter sp. RUH2624] gi|260406149|gb|EEW99634.1| glutamate synthase large subunit [Acinetobacter sp. RUH2624] Length = 1493 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|237746771|ref|ZP_04577251.1| glutamate synthase subunit large [Oxalobacter formigenes HOxBLS] gi|229378122|gb|EEO28213.1| glutamate synthase subunit large [Oxalobacter formigenes HOxBLS] Length = 1564 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 34/171 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + IAG GGT S + S + S + G+ Sbjct: 1051 ISVKLVSEVGVGTIAAGVAKAKADHIVIAGHDGGTGASPLSSIKHTGSP-----WEIGLA 1105 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + A G ++ G D++ + ILGA G A+ L Sbjct: 1106 EAQQTLVLNNLRGRVRIQADGQMKTGRDVVIAAILGADEVGFATAPLVTQGCIMMRKCHL 1165 Query: 292 ---------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 K + +V + + +E M LG ++ EL Sbjct: 1166 NTCPVGVATQDPELRKKFSGKPEYIVNYLFFVAEEMRQIMAQLGIRKYDEL 1216 >gi|157148787|ref|YP_001456107.1| glutamate synthase subunit alpha [Citrobacter koseri ATCC BAA-895] gi|157085992|gb|ABV15670.1| hypothetical protein CKO_04620 [Citrobacter koseri ATCC BAA-895] Length = 1498 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 1008 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1063 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1122 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1123 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVKRLVDLIGRTDLLK 1182 >gi|332364745|gb|EGJ42514.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK1059] Length = 312 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITSELKTIMEEKGYESLEDFR 304 >gi|262277408|ref|ZP_06055201.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium HIMB114] gi|262224511|gb|EEY74970.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium HIMB114] Length = 486 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 81/299 (27%), Gaps = 91/299 (30%) Query: 97 VMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV----HVLGADGLFLH 152 + D + F L LI +GA + G+++A + L D H Sbjct: 192 ITVKDIEKSEKFPLASKDKKKSLI--VGAAVGVGEDGLKRAKSLISANCDFLVVDTAHGH 249 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + +I+ +LS KI L++ + + K + Sbjct: 250 SKAVLDIV-----KKIRNLSKKITLIAGNIA------------TEEAAIDLAKLKVDAVK 292 Query: 213 IAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN---EAQFIASGGLRN 269 + G+ + V G P ++ + + + IA GG+R Sbjct: 293 VGIGPGSICTT------------RVVAGIGFPQFSAILNVKKALKKFKDVKVIADGGIRY 340 Query: 270 GVDILKSIILGASLG----------------------------GLA-----------SPF 290 DI K+I GA G+ F Sbjct: 341 SGDIAKAIGAGADAVMIGSLLAGTDETPGEIFFYQGRSYKSYRGMGSIAAMSRGSADRYF 400 Query: 291 -------LKPAMDSSDA-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 LK + + V I+ L SM LG K + E N + Sbjct: 401 QQDVKDQLKLVPEGIEGRVPYRGPVKNIIDQLAGGLKSSMGYLGAKNINEFKKNAKFVE 459 >gi|226953746|ref|ZP_03824210.1| glutamate synthase domain-containing 2 [Acinetobacter sp. ATCC 27244] gi|226835478|gb|EEH67861.1| glutamate synthase domain-containing 2 [Acinetobacter sp. ATCC 27244] Length = 1494 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1008 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1062 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1063 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1122 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + + +E + LG +++L Sbjct: 1123 NNCATGVATQQDHLRQEHYIGEPQMLINFFKFIAEETREWLAALGVSSLKDL 1174 >gi|152972138|ref|YP_001337284.1| glutamate synthase subunit alpha [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956987|gb|ABR79017.1| glutamate synthase, large subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 1448 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 958 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1012 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1013 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1072 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1073 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVKRLVDLIGRTDLLK 1132 >gi|148980238|ref|ZP_01815946.1| inositol-5-monophosphate dehydrogenase [Vibrionales bacterium SWAT-3] gi|145961332|gb|EDK26641.1| inositol-5-monophosphate dehydrogenase [Vibrionales bacterium SWAT-3] Length = 487 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 70/221 (31%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++I +A D+ ++ V G +++G+ + G+ + Sbjct: 256 GVLNRIRETRAAYPDLQIIGGNVATG---AGARALIEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ A NE IA GG+R DI K+I+ GAS + Sbjct: 308 -------RIVTGVGVPQVTAIADAAEVANEYGIPVIADGGIRFSGDICKAIVAGASCVMV 360 Query: 287 ASPFL---------------------------------------------KPAMDSSDAV 301 S F K + + Sbjct: 361 GSMFAGTEEAPGEVILYNGRSYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR 420 Query: 302 VAAIESLRK-------EFIVSMFLLGTKRVQELYLNTALIR 335 +A L++ SM L G+ ++++ +R Sbjct: 421 IAYKGRLKELVHQQMGGLRSSMGLTGSATIEDMRTKAEFVR 461 >gi|256380520|ref|YP_003104180.1| inosine 5-monophosphate dehydrogenase [Actinosynnema mirum DSM 43827] gi|255924823|gb|ACU40334.1| IMP dehydrogenase family protein [Actinosynnema mirum DSM 43827] Length = 377 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 73/273 (26%), Gaps = 69/273 (25%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 ++Q V ++ + Q +F V +L G + + +P +F Sbjct: 129 AIKQVRDSGVTVAVRVSPQHAAEFTPDLLAAGVEILVVQGTIISAEHVSRDGEPLNLKSF 188 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +D+P++ VG +++G + G G T Sbjct: 189 ----------IADLDIPVIAGGVG---DYRTAMHLMRTGAAGVIV-GYGYTPGVTT---- 230 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE---------AQFIASGGLRNGVDILKSIIL 279 G+P ++ A + IA GG+ D+ KSI Sbjct: 231 ------SDSVLGIGVPMATAIADAAAARRDYLDETGGRYVHVIADGGVLTSGDVAKSIAC 284 Query: 280 GASLGGLASPFLKPAM-----------------------DSSDAVVAA------------ 304 GA L P A D VV Sbjct: 285 GADAVMLGEPLAGAAEAPGQGLYWTAASAHPSVPRSHVSTGVDQVVDLRSLLFGPSVDPR 344 Query: 305 -IESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 + +L +M G ++E IR Sbjct: 345 GVTNLFGSLRRAMAKTGYSDLKEFQKVGLTIRG 377 >gi|126668660|ref|ZP_01739611.1| Ferredoxin-dependent glutamate synthase [Marinobacter sp. ELB17] gi|126626838|gb|EAZ97484.1| Ferredoxin-dependent glutamate synthase [Marinobacter sp. ELB17] Length = 528 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 103/303 (33%), Gaps = 42/303 (13%) Query: 27 DDWHLIHRAL-PEISFDEVDPSVEFLGKKL-----SFPLLISSMTGG--NNKMIERINR- 77 D + ++ +L P+ VD V F G + + P IS+M+ G + + +NR Sbjct: 118 DGYEWVNHSLAPKECLP-VDLWVTFGGPECIRPYEASPFNISAMSYGALSRNAVMALNRG 176 Query: 78 -NLAIAAEKTK--------------VAMAVGSQRVMFSDHNAIKSFEL--RQYAPHTVLI 120 L A T + +G+ + + +L Q V + Sbjct: 177 AKLGNFAHNTGEGGISEWHLEYGGDLIWQIGTGYFGCRTPDGVFDPDLFTEQATQDVVKM 236 Query: 121 SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS 180 + Q G A + + Q+++ P G++ F+ + ++ Sbjct: 237 IEIKLSQ-GAKPGHGGVLPAAKLTEEIARIRMVPMGQDVLSPPGHSAFSSPVELLQFVAQ 295 Query: 181 AMDV----PLLLK----EVGCGLSSMDIELGLKSGIRYFDI-AGRGGTSWSRIESHRDLE 231 + P+ K L L + + G GGT + +E L Sbjct: 296 LRKLSGGKPVGFKLCPGNRREFLGICKAMLKTGLRPDFITVDGGEGGTGAAPVE----LT 351 Query: 232 SDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +G+ +D G+ + ++ + IASG + IL+ +ILGA A + Sbjct: 352 NSVGMPLRD-GLHFVHNALRGIGVRDKIRIIASGKAFSAFHILRMMILGADTVNSARGMM 410 Query: 292 KPA 294 Sbjct: 411 LAL 413 >gi|126653044|ref|ZP_01725179.1| 2-nitropropane dioxygenase [Bacillus sp. B14905] gi|126590145|gb|EAZ84269.1| 2-nitropropane dioxygenase [Bacillus sp. B14905] Length = 335 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 90/253 (35%), Gaps = 48/253 (18%) Query: 58 PLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSF--ELRQYAP 115 P++ + M G + A + + +GS + D K F E+++ Sbjct: 11 PIIQAPMAGVTSP-------KFVAACTEAGL---LGSIGAGYLDGEQTKQFIQEVKKLTT 60 Query: 116 HTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD----- 170 + + NL VQ ++ +A L L L+P+Q ++ FA Sbjct: 61 KSFAV-NLF-VQEEPQIDIEVLQKARMALQPFYDELGLSPVQSVVSKE---VFAGQVQAV 115 Query: 171 LSSKIALLSSAMDVP---LL--LKE-----VGCGLSSMDIELGLKSGIRYFDIAG--RGG 218 + + + S +P +L LKE +G + + +L ++G+ + G GG Sbjct: 116 IEENVKICSFTFGIPSAEVLQQLKEHGVYTIGTATTLAEAQLVEQAGMDAVVLQGGEAGG 175 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSII 278 HR + + IP L IA+GGL DI K+I Sbjct: 176 --------HRGSFTAPLQL-----IP-LYDLLQQVAGNIAIPIIAAGGLVTKEDIQKAIE 221 Query: 279 LGASLGGLASPFL 291 GA + + L Sbjct: 222 SGAQAVQVGTVLL 234 >gi|78223496|ref|YP_385243.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens GS-15] gi|78194751|gb|ABB32518.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens GS-15] Length = 491 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 60/221 (27%), Gaps = 69/221 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + I L SA L+ G ++ E +K+G+ + G+ + Sbjct: 256 GVLDAIRSLKSAFPGVELI--AGNIATAEAAEALIKAGVDAIKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLA 287 V G+P ++ + IA GG++ D+ K++ GA + + Sbjct: 308 ------RVVAGVGVPQISAIAQCAKVARKYDIPLIADGGVKYSGDVTKAVAAGADVIMIG 361 Query: 288 SPF----------------------------------------------LKPAMDSSDAV 301 S F +K + + + Sbjct: 362 SLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKDRYFQSDVESEVKLVPEGIEGM 421 Query: 302 V-------AAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V A + L M G V EL IR Sbjct: 422 VPLRGPLGANVHQLMGGLRAGMGYTGCHTVSELQQKGRFIR 462 >gi|238756106|ref|ZP_04617427.1| Glutamate synthase [NADPH] large chain [Yersinia ruckeri ATCC 29473] gi|238705645|gb|EEP98041.1| Glutamate synthase [NADPH] large chain [Yersinia ruckeri ATCC 29473] Length = 1447 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 57/181 (31%), Gaps = 36/181 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 957 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1011 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1012 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1071 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQEL-YLNTALI 334 + VV + + +E M LG ++ +L LI Sbjct: 1072 NNCATGVATQDEKLRRDHYHGLPERVVNYFQFIARETRQIMAELGVSQLVDLIGRTDMLI 1131 Query: 335 R 335 Sbjct: 1132 E 1132 >gi|304315660|ref|YP_003850805.1| 2-nitropropane dioxygenase NPD [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777162|gb|ADL67721.1| 2-nitropropane dioxygenase NPD [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 363 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 36/262 (13%) Query: 43 EVDP-SVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSD 101 +++ S++ P+ + GG + N A A + + + + M Sbjct: 2 DINIKSLKIGNLVAKLPI----IQGGMGVGVSLSNLASA-VANEGGIGVISTAGIGMLE- 55 Query: 102 HNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 + + +N+ A++ +K + V L + ++ I Sbjct: 56 ----------KDFATNYIEANIRALRKEIKKAREKTKGIIGVNIMVALSNFADMVKTSID 105 Query: 162 PNGNTNFAD------LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAG 215 + F+ L + S VP++ L + + G Sbjct: 106 EGIDIIFSGAGLPLNLPKFLNNSSKTKLVPIVSSGKAFNLIAKRWLQKYDYLPDAVVVEG 165 Query: 216 --RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY----CNEAQFIASGGLRN 269 GG E + + + + +D L AR Y + IA+GG+ Sbjct: 166 PMAGGHLGYSSEQISNPDYSLDKILKDV-------LGEARQYEEISVKQIPVIAAGGIYT 218 Query: 270 GVDILKSIILGASLGGLASPFL 291 G DI K + +GA+ +A+ F+ Sbjct: 219 GEDIYKYLKMGAAGVQMATRFV 240 >gi|242240147|ref|YP_002988328.1| inosine 5'-monophosphate dehydrogenase [Dickeya dadantii Ech703] gi|242132204|gb|ACS86506.1| inosine-5'-monophosphate dehydrogenase [Dickeya dadantii Ech703] Length = 487 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 58/222 (26%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + D+ ++ V G ++G+ + G+ + Sbjct: 256 GVLQRIRETRAKYPDLQIIGGNVATG---AGARALAEAGVSAVKVGIGPGSICTT----- 307 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S + IA GG+R DI K++ GAS + Sbjct: 308 -------RIVTGVGVPQITAISDAVEALEGTGIPVIADGGIRFSGDIAKALAAGASCV-M 359 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 360 VGSMLAGTEESPGEIELYQGRAFKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEG 419 Query: 301 VVAAIESLRK-------EFIVSMFLLGTKRVQELYLNTALIR 335 VA L++ M L G ++ L +R Sbjct: 420 RVAYKGRLKEIVHQQMGGLRSCMGLTGCPTIEALRTKAEFVR 461 >gi|206891071|ref|YP_002248056.1| inosine-5'-monophosphate dehydrogenase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743009|gb|ACI22066.1| inosine-5'-monophosphate dehydrogenase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 486 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 59/223 (26%), Gaps = 69/223 (30%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + + L D+ ++ G + E +++G + G+ + Sbjct: 252 HSKGVIETLKELKRRFDIDIVA---GNIATQEAAEELIEAGADAVKVGIGPGSICTT--- 305 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLG 284 + G+P ++ ++ IA GG++ DI K++ GA Sbjct: 306 ---------RIVAGAGVPQLTAIMNCYSVTSKYNIPLIADGGIKYSGDITKALAAGAHCV 356 Query: 285 GLASPFL---------------------------------------------KPAMDSSD 299 + S F K + + Sbjct: 357 MIGSLFAGTDEAPGEIILYQGRSYKTYRGMGSIGAMQGGSRDRYRQEMVSPEKLVPEGVE 416 Query: 300 A-------VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + ++ L M G + ++EL I+ Sbjct: 417 GRVPYRGPLAKSVHQLVGGLKSGMGYCGCRTLEELRAKAKFIK 459 >gi|196233126|ref|ZP_03131973.1| Glutamate synthase (ferredoxin) [Chthoniobacter flavus Ellin428] gi|196222770|gb|EDY17293.1| Glutamate synthase (ferredoxin) [Chthoniobacter flavus Ellin428] Length = 1543 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 34/181 (18%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ ++G GGT S + S + + + G+ Sbjct: 1053 VCVKLVSEAGVGTVAAGVAKAHADIVLVSGHDGGTGASPLSSIKHAGTP-----WELGVA 1107 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL--------------------- 283 ++ + GG+R G+DI+ + ILGA Sbjct: 1108 ETQQTLVSNNLRSRIVLRTDGGMRTGIDIITAAILGAEEFNFGTAALIATGCVYVRQCHL 1167 Query: 284 ----GGLASP--FLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIRH 336 G+A+ L+ + + VV ++ +E + LG +++ ++ L++ Sbjct: 1168 NTCPVGVATQDEKLRAKYKGTPEMVVTFFNAVAEEVRGILASLGVRKLTDIIGRPELLKQ 1227 Query: 337 Q 337 + Sbjct: 1228 R 1228 >gi|15678170|ref|NP_275285.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621183|gb|AAB84648.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter thermautotrophicus str. Delta H] Length = 484 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 30/196 (15%) Query: 111 RQYAPHTVLI--SNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 R+ P+ L F +++A +A+ GAD L + + Sbjct: 206 RKRYPNASRDSEGYLRVAAATGPFDLERA-RALDEAGADVLAI--DSAHGHNM------- 255 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 +L + ++ L+ VG + E + + + G+ + Sbjct: 256 -NLVKSAGAMKKEIEADLI---VGNIATREAAEDLIAQDVDGLKVGIGPGSMCTT----- 306 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P ++ E IA GG+R DI K+I +GA L Sbjct: 307 -------RIIAGVGVPQLTAIAEVADVAAEYGVPVIADGGIRYSGDIAKAIAVGADCVML 359 Query: 287 ASPFLKPAMDSSDAVV 302 + D VV Sbjct: 360 GNLLAGTYEAPGDVVV 375 >gi|238896721|ref|YP_002921466.1| glutamate synthase subunit alpha [Klebsiella pneumoniae NTUH-K2044] gi|329997592|ref|ZP_08302862.1| glutamate synthase [NADPH], large subunit [Klebsiella sp. MS 92-3] gi|238549048|dbj|BAH65399.1| glutamate synthase large subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538968|gb|EGF65020.1| glutamate synthase [NADPH], large subunit [Klebsiella sp. MS 92-3] Length = 1486 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1111 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVKRLVDLIGRTDLLK 1170 >gi|262042777|ref|ZP_06015930.1| glutamate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|15375027|gb|AAK94787.1| glutamate synthase large subunit [Klebsiella aerogenes] gi|259039844|gb|EEW40962.1| glutamate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 1486 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1111 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVKRLVDLIGRTDLLK 1170 >gi|116495987|ref|YP_807721.1| glutamate synthase domain-containing 3 [Lactobacillus casei ATCC 334] gi|116106137|gb|ABJ71279.1| glutamate synthase (NADH) large subunit [Lactobacillus casei ATCC 334] Length = 1485 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 34/169 (20%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K V +K+G I+G GGT + R+ D G+ + G+ Sbjct: 996 VKLVSSTGVGTIAAGVVKAGANTVVISGYDGGTGAA----PRNSTRDCGLP-WEMGLADA 1050 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL----------------------- 283 G L G DI +I+LGA Sbjct: 1051 HQTLALNKLRQRTTLEVDGKLLTGRDIAVAIMLGAEEFSFGTLTMVAIGCVMMRKCNLNT 1110 Query: 284 --GGLA--SPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A +P L+ + V+ ++ L ++ M LG + V ++ Sbjct: 1111 CPVGIATQNPELRKLYAGRPENVIHMMQFLAEDLREQMAALGYRTVDQM 1159 >gi|322509617|gb|ADX05071.1| gltB [Acinetobacter baumannii 1656-2] Length = 1491 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1005 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1059 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1060 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1119 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1120 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1171 >gi|256853789|ref|ZP_05559154.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis T8] gi|307290518|ref|ZP_07570431.1| guanosine monophosphate reductase [Enterococcus faecalis TX0411] gi|256710732|gb|EEU25775.1| guanosine 5'-monophosphate oxidoreductase [Enterococcus faecalis T8] gi|306498465|gb|EFM67969.1| guanosine monophosphate reductase [Enterococcus faecalis TX0411] gi|315030192|gb|EFT42124.1| guanosine monophosphate reductase [Enterococcus faecalis TX4000] gi|315150133|gb|EFT94149.1| guanosine monophosphate reductase [Enterococcus faecalis TX0012] Length = 325 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 42/280 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 ++D LI S E D +V P++ M I+ +A + Sbjct: 6 YEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVV-------PANMQTIIDETIAETLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQA-VHVL 144 + D A F +++ ++ + GV++ A V L Sbjct: 59 NG-----YFYIMHRFDEEARVPF-IKKMQQKGLI--------TSISVGVKEGEYAFVETL 104 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 +GL + + + + ++ + + I L + ++ G + + Sbjct: 105 AREGL------VPDYVTIDIAHGHSNAVINMIQHLKKTLPETFVI--AGNVGTPEAVREL 156 Query: 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 +G + G + G W + +L + IA Sbjct: 157 ENAGADATKVGIGPGKVCIT-------KIKTGFGTGGWQL---AALRWCAKAARK-PIIA 205 Query: 264 SGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 GG+R DI KS+ GA++ + S F + V Sbjct: 206 DGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVE 245 >gi|213158939|ref|YP_002320937.1| glutamate synthase, large subunit [Acinetobacter baumannii AB0057] gi|213058099|gb|ACJ43001.1| glutamate synthase, large subunit [Acinetobacter baumannii AB0057] Length = 1491 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1005 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1059 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1060 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1119 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1120 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1171 >gi|332873781|ref|ZP_08441723.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6014059] gi|323519635|gb|ADX94016.1| glutamate synthase subunit alpha [Acinetobacter baumannii TCDC-AB0715] gi|332738004|gb|EGJ68889.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6014059] Length = 1513 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1027 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1081 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1082 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1141 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1142 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1193 >gi|251811849|ref|ZP_04826322.1| glutamate synthase (NADPH) [Staphylococcus epidermidis BCM-HMP0060] gi|282875137|ref|ZP_06284010.1| glutamate synthase-like protein [Staphylococcus epidermidis SK135] gi|251804646|gb|EES57303.1| glutamate synthase (NADPH) [Staphylococcus epidermidis BCM-HMP0060] gi|281295902|gb|EFA88423.1| glutamate synthase-like protein [Staphylococcus epidermidis SK135] Length = 525 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 88/275 (32%), Gaps = 39/275 (14%) Query: 50 FLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAV--------GSQRVMFSD 101 LG L P I + G + + +N AI A +A A G Sbjct: 165 VLGSNLKHPFKIKRLVGQSGMSYGALGKN-AITALSMGLAKAGTWMNTGEGGLSEYHLKG 223 Query: 102 HNAI------KSFELRQYAPHT--VLISNLGAVQLNYDFGVQKAHQA---------VHVL 144 + I F +R + + + NL F ++ A A V Sbjct: 224 NGDIIYQIGPGLFGVRDHDGNFNRDMFINLAEHNNVRAFEIKLAQGAKTRGGHMEGNKVT 283 Query: 145 GADGLFLHLNPLQEIIQPNG---NTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDI- 200 ++ P + I PN N DL + + L S P+ K V + ++ Sbjct: 284 EEIARIRNVKPYETINSPNRFDFIKNPTDLLNFVNHLQSIGQKPVGFKIVVSKVEEIEAL 343 Query: 201 ---ELGLKSGIRYFDI-AGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 + + + + + G GGT + E + + P S+ Sbjct: 344 VKTMVEIDTYPSFITVDGGEGGTGATFQELEDGVGLPLFTAL-----PIVSSMLEKYGIR 398 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 N+ + ASG L I ++ LGA L +A + Sbjct: 399 NKVKIFASGKLVTPDKIAIALGLGADLVNIARGMM 433 >gi|225026036|ref|ZP_03715228.1| hypothetical protein EUBHAL_00275 [Eubacterium hallii DSM 3353] gi|224956642|gb|EEG37851.1| hypothetical protein EUBHAL_00275 [Eubacterium hallii DSM 3353] Length = 1511 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 37/217 (17%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ ++ + + +K V K+G Sbjct: 974 HSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNANRNARISVKLVSEAGVGTVAAGVAKAG 1033 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R+ + + G+ + N+ G Sbjct: 1034 AQVILISGHDGGTGAA----PRNSSIHNAGLPWELGLAETHQTLIKNDLRNKVIIETDGK 1089 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 L +G D+ + LGA G A+ L K Sbjct: 1090 LMSGRDVAMAAALGAEEFGFATGPLITMGCVMMRVCNLDTCPVGIATQNPELRKRFKGKP 1149 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + VV ++ + +E M LG + V EL T L++ Sbjct: 1150 EYVVNYMKFVAQEMREYMAKLGVRTVDELVGRTDLLK 1186 >gi|184159704|ref|YP_001848043.1| glutamate synthase subunit alpha [Acinetobacter baumannii ACICU] gi|183211298|gb|ACC58696.1| Glutamate synthase domain 2 [Acinetobacter baumannii ACICU] Length = 1493 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|169794489|ref|YP_001712282.1| glutamate synthase subunit alpha [Acinetobacter baumannii AYE] gi|215482078|ref|YP_002324260.1| Glutamate synthase [NADPH] large chain precursor [Acinetobacter baumannii AB307-0294] gi|301344627|ref|ZP_07225368.1| glutamate synthase subunit alpha [Acinetobacter baumannii AB056] gi|301510072|ref|ZP_07235309.1| glutamate synthase subunit alpha [Acinetobacter baumannii AB058] gi|301595992|ref|ZP_07241000.1| glutamate synthase subunit alpha [Acinetobacter baumannii AB059] gi|332851349|ref|ZP_08433401.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6013150] gi|332868760|ref|ZP_08438383.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6013113] gi|169147416|emb|CAM85277.1| glutamate synthase large chain precursor [Acinetobacter baumannii AYE] gi|213985755|gb|ACJ56054.1| Glutamate synthase [NADPH] large chain precursor [Acinetobacter baumannii AB307-0294] gi|332730065|gb|EGJ61393.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6013150] gi|332733189|gb|EGJ64386.1| glutamate synthase [NADPH], large subunit [Acinetobacter baumannii 6013113] Length = 1493 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|296502046|ref|YP_003663746.1| nitropropane [Bacillus thuringiensis BMB171] gi|296323098|gb|ADH06026.1| nitropropane [Bacillus thuringiensis BMB171] Length = 362 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 148 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 196 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 197 FALIPQLVGVIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 242 >gi|297562952|ref|YP_003681926.1| inosine-5'-monophosphate dehydrogenase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847400|gb|ADH69420.1| inosine-5'-monophosphate dehydrogenase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 498 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 18/138 (13%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + + L+ IA L + ++ V + +L + +G + G+ + Sbjct: 262 HSSGLADMIAKLKANSRADIVAGNVA---TRAGAQLLIDAGADAVKVGVGPGSICTT--- 315 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLG 284 V G P ++ A C IA GGL+ +I K+I GAS Sbjct: 316 ---------RVVAGVGAPQLTAILEAAKACGPAGVPLIADGGLQYSGEIAKAIAAGASTV 366 Query: 285 GLASPFLKPAMDSSDAVV 302 + L +S ++ Sbjct: 367 -MLGSLLAGVEESPGELI 383 >gi|227533036|ref|ZP_03963085.1| glutamate synthase (NADPH) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189437|gb|EEI69504.1| glutamate synthase (NADPH) [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 1485 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 34/169 (20%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K V +K+G I+G GGT + R+ D G+ + G+ Sbjct: 996 VKLVSSTGVGTIAAGVVKAGANTVVISGYDGGTGAA----PRNSTRDCGLP-WEMGLADA 1050 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL----------------------- 283 G L G DI +I+LGA Sbjct: 1051 HQTLALNKLRQRTTLEVDGKLLTGRDIAVAIMLGAEEFSFGTLTMVAIGCVMMRKCNLNT 1110 Query: 284 --GGLA--SPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A +P L+ + V+ ++ L ++ M LG + V ++ Sbjct: 1111 CPVGIATQNPELRKLYAGRPENVIHMMQFLAEDLREQMAALGYRTVDQM 1159 >gi|218291413|ref|ZP_03495348.1| Glutamate synthase (ferredoxin) [Alicyclobacillus acidocaldarius LAA1] gi|218238732|gb|EED05949.1| Glutamate synthase (ferredoxin) [Alicyclobacillus acidocaldarius LAA1] Length = 1241 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 200 IELGLKSGIRYFDIAGR-GGTSWSRIESHRDLE--SDIGIVFQDWGIPTPLSLEMARPYC 256 K+G ++G GGT +R + R + +IG+ +L A Sbjct: 1003 AVGIAKAGADVITLSGFDGGTGAARAHAIRHVGLPMEIGVKLAH------EALCEA-GLR 1055 Query: 257 NEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + A GG+++G D++K+I+LGA+ G Sbjct: 1056 EYVELWADGGMKSGHDVMKAILLGANRVGFG 1086 >gi|260556922|ref|ZP_05829139.1| glutamate synthase large subunit [Acinetobacter baumannii ATCC 19606] gi|193078557|gb|ABO13580.2| glutamate synthase large chain precursor [Acinetobacter baumannii ATCC 17978] gi|260409528|gb|EEX02829.1| glutamate synthase large subunit [Acinetobacter baumannii ATCC 19606] Length = 1493 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|156043755|ref|XP_001588434.1| hypothetical protein SS1G_10881 [Sclerotinia sclerotiorum 1980] gi|154695268|gb|EDN95006.1| hypothetical protein SS1G_10881 [Sclerotinia sclerotiorum 1980 UF-70] Length = 370 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 29/194 (14%) Query: 123 LGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSS-A 181 +G N+D + A +A ++L+ P + + + ++ + Sbjct: 88 IGIGFQNWDCKINVALEATKKHKPSAIWLY--------APKRTEDLREWAVELRSIGDGK 139 Query: 182 MDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDW 241 + + + + V L M+I I+ D G G +R S L ++ D Sbjct: 140 ISIWVQVGTVREALDVMEIVRPDVLVIQGTDAGGHG---LARSASIISLLPEVADALGD- 195 Query: 242 GIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 P +A+GG+ +G + ++ LGA+ + + FL Sbjct: 196 ----------KDPALKGIPLLAAGGIMDGRGVAAALCLGATGAVMGTRFLAAEEAGIP-- 243 Query: 302 VAAIESLRKEFIVS 315 ++E + + Sbjct: 244 ----RGWQRELLKA 253 >gi|154487374|ref|ZP_02028781.1| hypothetical protein BIFADO_01224 [Bifidobacterium adolescentis L2-32] gi|154083892|gb|EDN82937.1| hypothetical protein BIFADO_01224 [Bifidobacterium adolescentis L2-32] Length = 372 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S + + + Sbjct: 179 NLKKFIYDLDVPVI---VGGAANYTAALHLMRTGAAGVLV-GFGGGAVSANRNTIGVHAP 234 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K+ LGA L Sbjct: 235 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKAFALGADAVMLG 286 Query: 288 SPFLKPA 294 SP + + Sbjct: 287 SPLARAS 293 >gi|302907599|ref|XP_003049682.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730618|gb|EEU43969.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 2113 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 62/209 (29%), Gaps = 38/209 (18%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ S+ + +K V + K+ Sbjct: 1040 HSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSSPRSRVSVKLVSEVGVGIVASGVAKAK 1099 Query: 208 IRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGG 266 + I+G GGT + R + + G+ + G Sbjct: 1100 ADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQ 1154 Query: 267 LRNGVDILKSIILGASLGGLASPFL----------------------------KPAMDSS 298 L+ G D+ + +LGA G A+ L K S Sbjct: 1155 LKTGRDVALACLLGAEEWGFATAPLIAMGCVFMRKCHLNTCPVGIATQDPELRKKFKGSP 1214 Query: 299 DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + V+ + E M LG + + E+ Sbjct: 1215 EHVINFFYYVANELRAIMAQLGFRTINEM 1243 >gi|228957742|ref|ZP_04119485.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar pakistani str. T13001] gi|229108923|ref|ZP_04238526.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus Rock1-15] gi|229144069|ref|ZP_04272485.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus BDRD-ST24] gi|228639466|gb|EEK95880.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus BDRD-ST24] gi|228674524|gb|EEL29765.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus Rock1-15] gi|228801935|gb|EEM48809.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar pakistani str. T13001] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGVIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|239630384|ref|ZP_04673415.1| glutamate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067537|ref|YP_003789560.1| glutamate synthase domain 3 [Lactobacillus casei str. Zhang] gi|239526667|gb|EEQ65668.1| glutamate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439944|gb|ADK19710.1| Glutamate synthase domain 3 [Lactobacillus casei str. Zhang] Length = 1485 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 34/169 (20%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K V +K+G I+G GGT + R+ D G+ + G+ Sbjct: 996 VKLVSSTGVGTIAAGVVKAGANTVVISGYDGGTGAA----PRNSTRDCGLP-WEMGLADA 1050 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL----------------------- 283 G L G DI +I+LGA Sbjct: 1051 HQTLALNKLRQRTTLEVDGKLLTGRDIAVAIMLGAEEFSFGTLTMVAIGCVMMRKCNLNT 1110 Query: 284 --GGLA--SPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A +P L+ + V+ ++ L ++ M LG + V ++ Sbjct: 1111 CPVGIATQNPELRKLYAGRPENVIHMMQFLAEDLREQMAALGYRTVDQM 1159 >gi|191639467|ref|YP_001988633.1| Glutamate synthase (Large subunit) [Lactobacillus casei BL23] gi|190713769|emb|CAQ67775.1| Glutamate synthase (Large subunit) [Lactobacillus casei BL23] gi|327383561|gb|AEA55037.1| Glutamate synthase [Lactobacillus casei LC2W] gi|327386753|gb|AEA58227.1| Glutamate synthase [Lactobacillus casei BD-II] Length = 1485 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 34/169 (20%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTP 246 +K V +K+G I+G GGT + R+ D G+ + G+ Sbjct: 996 VKLVSSTGVGTIAAGVVKAGANTVVISGYDGGTGAA----PRNSTRDCGLP-WEMGLADA 1050 Query: 247 LSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL----------------------- 283 G L G DI +I+LGA Sbjct: 1051 HQTLALNKLRQRTTLEVDGKLLTGRDIAVAIMLGAEESSFGTLTMVAIGCVMMRKCNLNT 1110 Query: 284 --GGLA--SPFLKPAMDS-SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 G+A +P L+ + V+ ++ L ++ M LG + V ++ Sbjct: 1111 CPVGIATQNPELRKLYAGRPENVIHMMQFLAEDLREQMAALGYRTVDQM 1159 >gi|260101961|ref|ZP_05752198.1| GMP reductase [Lactobacillus helveticus DSM 20075] gi|260084221|gb|EEW68341.1| GMP reductase [Lactobacillus helveticus DSM 20075] gi|328464109|gb|EGF35588.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus helveticus MTCC 5463] Length = 324 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 85/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +D+ L+ S + D SV+F + P++ M IN +LAI + Sbjct: 6 YDNIQLVPNKGIINSRRDADTSVKFGNRTFKIPVV-------PANMESVINDDLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV-L 144 + F + L +++ + ++ + + V L Sbjct: 59 NG-----YYYVMHRFQPEKRILF--IKMMHKKGLFASISVGIKDSEY--KFIDELVEQNL 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + L G + + Sbjct: 110 KPEYITIDV----------AHGHSIYVIKMIKYIKQKLPESFLT--AGNIATPEAVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + +L M ++ IA Sbjct: 158 NAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAASK-PMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KS+ GA++ + S F Sbjct: 207 GGIRHNGDIAKSVRFGATMVMIGSLF 232 >gi|239501959|ref|ZP_04661269.1| glutamate synthase subunit alpha [Acinetobacter baumannii AB900] Length = 1493 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|229189547|ref|ZP_04316563.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus ATCC 10876] gi|228593992|gb|EEK51795.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus ATCC 10876] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGVIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|218235363|ref|YP_002366149.1| nitropropane dioxygenase [Bacillus cereus B4264] gi|218163320|gb|ACK63312.1| nitropropane dioxygenase [Bacillus cereus B4264] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGAVPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|206576300|ref|YP_002236374.1| glutamate synthase (NADPH), large subunit [Klebsiella pneumoniae 342] gi|288933358|ref|YP_003437417.1| glutamate synthase (ferredoxin) [Klebsiella variicola At-22] gi|290511591|ref|ZP_06550960.1| glutamate synthase subunit (NADPH/NADH) large [Klebsiella sp. 1_1_55] gi|206565358|gb|ACI07134.1| glutamate synthase (NADPH), large subunit [Klebsiella pneumoniae 342] gi|288888087|gb|ADC56405.1| Glutamate synthase (ferredoxin) [Klebsiella variicola At-22] gi|289776584|gb|EFD84583.1| glutamate synthase subunit (NADPH/NADH) large [Klebsiella sp. 1_1_55] Length = 1486 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG KR+ +L T L++ Sbjct: 1111 NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVKRLVDLIGRTDLLK 1170 >gi|169632254|ref|YP_001705990.1| glutamate synthase subunit alpha [Acinetobacter baumannii SDF] gi|169151046|emb|CAO99699.1| glutamate synthase large chain precursor [Acinetobacter baumannii] Length = 1493 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 1007 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1061 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1062 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1121 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1122 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1173 >gi|149021628|ref|ZP_01835659.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP23-BS72] gi|147930089|gb|EDK81075.1| dihydroorotate dehydrogenase 1A [Streptococcus pneumoniae SP23-BS72] gi|332077178|gb|EGI87640.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae GA17545] Length = 311 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 16/182 (8%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + + PL +K + K +++ + G Sbjct: 138 PQIAYDFETTDRILAEVFAYFTKPLGIKLPPYFDIVHFDQAAAIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + ++ PT L+ A + + Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGEYIKPTALANVHAFYQRLNPQIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 + I+ GAS+ + + K + V +A + + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGV-SAFDCITNELKAIMVEKGYESLEDFRGKLRY 309 Query: 334 IR 335 I Sbjct: 310 ID 311 >gi|301167264|emb|CBW26846.1| putative inosine-5'-monophosphate dehydrogenase [Bacteriovorax marinus SJ] Length = 350 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/228 (11%), Positives = 72/228 (31%), Gaps = 44/228 (19%) Query: 110 LRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFA 169 ++ + +++G + G +A +G D L + + ++ Sbjct: 96 IKDNNLSGPVAASIG----VKEEGKLRAKLLAD-IGVDILTIDIAHGDSVMMLETLEYVK 150 Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 I +++ + + ++ + G + G+ + Sbjct: 151 KTWPHIDVIAGNVA------------TGEGVKRMIDLGADAVKVGIGPGSMCTT------ 192 Query: 230 LESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P + +++ + ++ IA GG++ DI+K++ GA +A Sbjct: 193 ------RIITGHGVPQLSAIAMCVEEAIKHDVPVIADGGIKTSGDIVKALCAGAQTI-MA 245 Query: 288 SPFLKPAMDSSDAVVAAIE------------SLRKEFIVSMFLLGTKR 323 L +++ + ++ S R E M G Sbjct: 246 GSLLSGTLETPGELKGGMKEYRGMASKAAQVSWRGELPKGMAAEGVDT 293 >gi|213648877|ref|ZP_03378930.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 1432 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 942 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 996 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 997 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1056 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1057 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1116 >gi|198429177|ref|XP_002121295.1| PREDICTED: similar to inosine-5-monophosphate dehydrogenase isoform 2 [Ciona intestinalis] Length = 595 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 28/177 (15%) Query: 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD 183 GA + + V G D + L + I Q N + +++ + Sbjct: 307 GAAISTREEDKHRLELLVEA-GVDAVILDSSQGNSIYQINSIRYIRHKYPHLQVIAGNV- 364 Query: 184 VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGI 243 +++ + + +G + G+ E G Sbjct: 365 -----------VTAAQAKNLIDAGADALRVGMGSGSICITQEVM------------AVGR 401 Query: 244 PTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSS 298 P ++ Y IA GG++N + K++ LGAS + L +S Sbjct: 402 PQATAVYKVSEYARRFNVPVIADGGIQNVGHVTKALALGASTV-MMGSLLAATTESP 457 >gi|149194047|ref|ZP_01871145.1| 2-nitropropane dioxygenase, NPD [Caminibacter mediatlanticus TB-2] gi|149136000|gb|EDM24478.1| 2-nitropropane dioxygenase, NPD [Caminibacter mediatlanticus TB-2] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 27/227 (11%) Query: 94 SQRVMFSDHNAIKSFEL-RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLH 152 +++ ++ IK FE R+ L N+ +Y V+ A +A + G L Sbjct: 68 TEKEFYNHDALIKIFENARKICGEAPLGCNVLYAINDYGRVVRDACEAGANIIITGAGLP 127 Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 + P +F D++ VP++ L + E Sbjct: 128 TD------MPEFTKDFPDVAL----------VPIVSTGRAFKLIAKRWEKRYGRIPDAVI 171 Query: 213 IAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNG 270 + G GG + E E+ + + IP E + IA+GG+ + Sbjct: 172 VEGPLSGGHQGFKYEDCFKEENQLENL-----IPDVR--EEVNRWDKNIPVIAAGGIWDR 224 Query: 271 VDILKSIILGASLGGLASPF-LKPAMDSSDAVVAAIESLRKEFIVSM 316 DI K + LGA+ + + F L D+SD + + +K+ I+ M Sbjct: 225 KDIEKFLSLGANGVQMGTRFALTYECDASDNFKQVLLNAKKDDIILM 271 >gi|70991272|ref|XP_750485.1| glutamate synthase Glt1 [Aspergillus fumigatus Af293] gi|66848117|gb|EAL88447.1| glutamate synthase Glt1, putative [Aspergillus fumigatus Af293] gi|159130958|gb|EDP56071.1| glutamate synthase Glt1, putative [Aspergillus fumigatus A1163] Length = 2126 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 62/214 (28%), Gaps = 38/214 (17%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRY 210 P +I P + + + L+ S + +K V + K+ + Sbjct: 1043 PGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIVASGVAKAKADH 1102 Query: 211 FDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRN 269 I+G GGT + R + + G+ + G LR Sbjct: 1103 ILISGHDGGTG-----ASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVVVQTDGQLRT 1157 Query: 270 GVDILKSIILGASLGGLASPFLKPA----------------------------MDSSDAV 301 G D+ + +LGA G A+ L + + V Sbjct: 1158 GRDVAIACLLGAEEFGFATTPLIALGCIMMRKCHLNTCPVGIATQDPELRQKFKGTPEHV 1217 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + E M LG + V E+ L+R Sbjct: 1218 INFFYYVANEMRAIMAKLGIRTVNEMVGRAELLR 1251 >gi|161508166|ref|YP_001578137.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus helveticus DPC 4571] gi|160349155|gb|ABX27829.1| GMP reductase [Lactobacillus helveticus DPC 4571] Length = 324 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 85/266 (31%), Gaps = 40/266 (15%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +D+ L+ S + D SV+F + P++ M IN +LAI + Sbjct: 6 YDNIQLVPNKGIINSRRDADTSVKFGNRTFKIPVV-------PANMESVINDDLAIWLAE 58 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHV-L 144 + F + L +++ + ++ + + V L Sbjct: 59 NG-----YYYVMHRFQPEKRILF--IKMMHEKGLFASISVGIKDSEY--KFIDELVEQNL 109 Query: 145 GADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL 204 + + + + + + + I + + L G + + Sbjct: 110 KPEYITIDV----------AHGHSIYVIKMIKYIKQKLPESFLT--AGNIATPEAVRELE 157 Query: 205 KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIAS 264 +G + G + + G W + +L M ++ IA Sbjct: 158 NAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAASK-PMIAD 206 Query: 265 GGLRNGVDILKSIILGASLGGLASPF 290 GG+R+ DI KS+ GA++ + S F Sbjct: 207 GGIRHNGDIAKSVRFGATMVMIGSLF 232 >gi|146280956|ref|YP_001171109.1| glutamate synthase subunit alpha [Pseudomonas stutzeri A1501] gi|145569161|gb|ABP78267.1| glutamate synthase large chain precursor [Pseudomonas stutzeri A1501] Length = 1482 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S R S + + Sbjct: 996 VSVKLVAEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIRYAGSPWELGLAE---- 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L + + GGL+ G+D++K+ ILGA G + + Sbjct: 1052 THQTLR-GNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMIALGCKYLRICHL 1110 Query: 295 -------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + D VV + + +E + LG + + EL T L+ Sbjct: 1111 NNCATGVATQNEQLRKDHFIGTVDMVVNFFQFVAEETREWLAKLGVRSLGELIGRTDLLE 1170 >gi|126729797|ref|ZP_01745610.1| inosine-5'-monophosphate dehydrogenase [Sagittula stellata E-37] gi|126709916|gb|EBA08969.1| inosine-5'-monophosphate dehydrogenase [Sagittula stellata E-37] Length = 482 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 44/139 (31%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + + ++ + V ++ V ++ + +G + G+ + Sbjct: 250 HSRGVLEAVSRAKRLSNEVQVIAGNVA---TAEATMALIDAGADAVKVGIGPGSICTT-- 304 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ + IA GG++ D K+I GAS Sbjct: 305 ----------RMVAGVGMPQLTAIMDCAKAAGDVPVIADGGIKFSGDFAKAIAAGAS-CA 353 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 354 MVGSMIAGTDESPGEVILY 372 >gi|326625080|gb|EGE31425.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 1448 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 958 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1012 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1013 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1072 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1073 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1132 >gi|325693746|gb|EGD35665.1| dihydroorotate dehydrogenase A [Streptococcus sanguinis SK150] Length = 312 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F ++ + + PL +K E+ K +++ + G Sbjct: 138 PQIAYDFETTEKILSEVFAYFTKPLGIKLPPYFDIVHFDQAAEIFNKYPLKFVNCVNSIG 197 Query: 219 TSWSRIESH---RDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDI 273 + IE ++ G + + PT L+ A + E Q I +GG+ G D Sbjct: 198 -NGLYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLKPEIQIIGTGGVLTGRDA 256 Query: 274 LKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + I+ GAS+ + + K + V A E + E M G + +++ Sbjct: 257 FEHILCGASMVQVGTTLHK------EGVAA-FERITSELKAIMEEKGYESLEDFR 304 >gi|322615335|gb|EFY12256.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322622889|gb|EFY19733.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322635375|gb|EFY32089.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322651583|gb|EFY47956.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322675688|gb|EFY71761.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682324|gb|EFY78347.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684927|gb|EFY80925.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323204315|gb|EFZ89324.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207662|gb|EFZ92609.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214773|gb|EFZ99522.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221253|gb|EGA05679.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323230345|gb|EGA14464.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233321|gb|EGA17415.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239358|gb|EGA23408.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323254166|gb|EGA37986.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255283|gb|EGA39060.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262746|gb|EGA46302.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264056|gb|EGA47564.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269442|gb|EGA52897.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 1448 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 958 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1012 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1013 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1072 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1073 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1132 >gi|317495544|ref|ZP_07953912.1| dihydroorotate dehydrogenase [Gemella moribillum M424] gi|316914358|gb|EFV35836.1| dihydroorotate dehydrogenase [Gemella moribillum M424] Length = 310 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 16/176 (9%) Query: 162 PNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSS---MDIELGLKSGIRYFDIAGRGG 218 P +F +A + S PL +K + E+ K + Y + G Sbjct: 135 PQIAYDFDLTEKLLAEVFSFFTKPLGVKLPPYFDIAHFDAMAEILNKFPLTYVNSVNSIG 194 Query: 219 ----TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVD 272 + E + G + ++ PT L+ A + + + I +GG+ NG D Sbjct: 195 NGLCIDLDKEEVVIKPKGGFGGIGGEYIKPTALANVRAFRQRLNKDIKIIGTGGVTNGRD 254 Query: 273 ILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELY 328 + + I+ GA L + L + V E L E M G +++ Sbjct: 255 VFEHILCGADLVQV-GTILH-----QEGV-GVFERLSAELEEVMRGKGYSSIEDFK 303 >gi|262377196|ref|ZP_06070421.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter lwoffii SH145] gi|262307934|gb|EEY89072.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter lwoffii SH145] Length = 488 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 45/197 (22%) Query: 153 LNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEVGCGLSSMDIELGLKSGIRYF 211 +N QE+ T+F + + + + +E + +G+ Sbjct: 185 VNDQQELKGLITVTDFRKAELYPNSCKDDLGRLRVGAAVGTGAETPSRVEALVDAGVDVI 244 Query: 212 DIAGRGGTSWSRIESHRDLESDIGI----------------------------------- 236 + G S IE R ++++ Sbjct: 245 VVDTAHGHSAGVIERVRWVKANYPQVQVIGGNIATGDAALALLDAGADAVKVGIGPGSIC 304 Query: 237 ---VFQDWGIPTPLSLE-MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLK 292 + G+P +++ +A ++ IA GG+R D+ K+I GAS + Sbjct: 305 TTRIVAGIGMPQISAIDSVANALKDQIPLIADGGIRFSGDMAKAIGAGASTI-----MVG 359 Query: 293 PAMDSSDAVVAAIESLR 309 M ++ +E + Sbjct: 360 SLMAGTEEAPGEVEFFQ 376 >gi|161616343|ref|YP_001590309.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365707|gb|ABX69475.1| hypothetical protein SPAB_04152 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 1448 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 958 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1012 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1013 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1072 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1073 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1132 >gi|159184180|ref|NP_353180.2| glutamate synthase large subunit [Agrobacterium tumefaciens str. C58] gi|159139512|gb|AAK85965.2| glutamate synthase large subunit [Agrobacterium tumefaciens str. C58] Length = 1782 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ + A V +++K V K+G + Sbjct: 1065 PGVELVSPPPHHDTYSIEDLAQLIHDAKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1124 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG + Sbjct: 1125 VAGNTGGTGAAAVTSLKYTGRA-----AEIGIAEVHQALCATGLRAKVLLRCSGAHQTAS 1179 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 D++KS +LG + L + A+ + ++ Sbjct: 1180 DVVKSALLGGDSFEFGTTALMMLKCVMAKNCNIKCPAGLTTNQEAFNGDPRALAQYLMNI 1239 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + ++E + L+ Sbjct: 1240 AHETREILAGLGLRSLREARGRSDLLH 1266 >gi|146313290|ref|YP_001178364.1| glutamate synthase subunit alpha [Enterobacter sp. 638] gi|145320166|gb|ABP62313.1| glutamate synthase (NADPH) large subunit [Enterobacter sp. 638] Length = 1516 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 1026 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1080 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ G+DI+K+ ILGA G P + Sbjct: 1081 ETQQALVANGLRHKIRLQVDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1140 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1141 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLK 1200 >gi|238796206|ref|ZP_04639716.1| Glutamate synthase [NADPH] large chain [Yersinia mollaretii ATCC 43969] gi|238719899|gb|EEQ11705.1| Glutamate synthase [NADPH] large chain [Yersinia mollaretii ATCC 43969] Length = 1458 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 968 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1022 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1023 ETQQALVANGLRHKIRLQVDGGLKTGVDIVKAAILGAESFGFGTGPMVALGCKYLRICHL 1082 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + + +E M LG +++ +L Sbjct: 1083 NNCATGVATQDEKLRRDHYHGLPERVVNYFQFIARETREIMAELGVRQLVDL 1134 >gi|238785115|ref|ZP_04629110.1| Glutamate synthase [NADPH] large chain [Yersinia bercovieri ATCC 43970] gi|238714007|gb|EEQ06024.1| Glutamate synthase [NADPH] large chain [Yersinia bercovieri ATCC 43970] Length = 1448 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 958 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1012 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKPAMDS------ 297 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1013 ETQQALVANGLRHKIRLQVDGGLKTGVDIVKAAILGAESFGFGTGPMVALGCKYLRICHL 1072 Query: 298 ----------------------SDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + VV + + +E M LG +++ +L Sbjct: 1073 NNCATGVATQDEKLRRDHYHGLPERVVNYFQFIARETREIMAELGVRQLVDL 1124 >gi|229491670|ref|ZP_04385491.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321351|gb|EEN87151.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 1822 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A + +++K V K+G + Sbjct: 1109 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARIRVIVKLVSSEGIGTIAVGVAKAGADVIN 1168 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG + G Sbjct: 1169 VAGNTGGTGAASVTSLKYAGRA-----AEVGIAEVHQALCANGLRQKVVLRCSGAHQTGS 1223 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 DI+ S +LGA + L + A+ + ++ Sbjct: 1224 DIITSALLGADSFEFGTSALMMMGCVMAKNCNIKCPAGLTTNPELFDGDPRAMAQYLLNI 1283 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + +QE T L+ Sbjct: 1284 AHETRELLANLGMRSLQEARGRTDLLH 1310 >gi|217072536|gb|ACJ84628.1| unknown [Medicago truncatula] Length = 180 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%) Query: 13 VCKDPGIDRNKKFFDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMT 65 + N+ F R L ++D + LG +S P++I+ Sbjct: 30 AEDQWTLQENRNAFSRILFRPRIL--RDVSKIDLTTTVLGFNISMPIMIAPTA 80 >gi|254421434|ref|ZP_05035152.1| IMP dehydrogenase family protein [Synechococcus sp. PCC 7335] gi|196188923|gb|EDX83887.1| IMP dehydrogenase family protein [Synechococcus sp. PCC 7335] Length = 387 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 107/381 (28%), Gaps = 101/381 (26%) Query: 25 FFDDWHLIH--RAL-PEISFDEVDPSVEFLGKKLSFPLLISSMTG--------------- 66 D+ L+ R L P+++ D S + G P++ S+M G Sbjct: 16 GIDEIALVPGARTLDPQLA----DTSWQIGGITREIPIIASAMDGVVDVKMAVELSKLGA 71 Query: 67 -------GNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIK--SFELRQYAPHT 117 G + N L A K V + +++ + +++ Sbjct: 72 LGVLNLEGIQTRYDNPNPILDRIASVGKTEF-VPLMQELYAQPVRADLITKRIQEIKAQE 130 Query: 118 VLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQ-EIIQPNGNTNFADLSSKIA 176 + + FG A ++ + + L + + P +F Sbjct: 131 GIAAVSLTPAGAVKFGKTVAEAGADLVFVQATVVSTDHLSPKAVTPLDLVSF-------- 182 Query: 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGI 236 M +P+LL G ++ +K+G + G + + Sbjct: 183 --CEEMPIPVLL---GNCVTYEVTLKLMKAGAAGVLVGIGPGAACT------------SR 225 Query: 237 VFQDWGIPTPLSLEMARPYCNE--------AQFIASGGLRNGVDILKSIILGASLGGLAS 288 G+P ++ ++ IA GGL G DI K I GA + S Sbjct: 226 GVLGVGVPQATAVADCAAARDDYQKESGRYVPIIADGGLVTGGDICKCIASGADGVMIGS 285 Query: 289 PF-----------------------------------LKPAMDSSDAVVAAIESLRKEFI 313 PF L+ + + + Sbjct: 286 PFARAQEAPGRGFHWGMATPSPVLPRGTRIEVGTTGSLQQILRGPAQLDDGTHNFLGALQ 345 Query: 314 VSMFLLGTKRVQELYLNTALI 334 SM LG K ++E+ +I Sbjct: 346 TSMGTLGAKDLKEMQQVEVVI 366 >gi|126643198|ref|YP_001086182.1| glutamate synthase subunit alpha [Acinetobacter baumannii ATCC 17978] Length = 1461 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ + I+G GGT+ S + S + G+ Sbjct: 975 VSVKLVSEPGVGTIAAGVAKAYADFITISGYDGGTAASPLSSI-----HHAGSPWELGLS 1029 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 + + GGL+ G+D++K+ ILGA G S + Sbjct: 1030 EAHQALRVNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHL 1089 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 + + ++ + +E + LG +++L Sbjct: 1090 NNCATGVATQQDHLRQEHYIGEPQMLINFFHFIAEETREWLAALGVASLKDL 1141 >gi|119025795|ref|YP_909640.1| inosine 5-monophosphate dehydrogenase [Bifidobacterium adolescentis ATCC 15703] gi|118765379|dbj|BAF39558.1| GMP reductase [Bifidobacterium adolescentis ATCC 15703] Length = 379 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%) Query: 174 KIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESD 233 + +DVP++ VG + +++G + G GG + S + + + Sbjct: 186 NLKKFIYDLDVPVI---VGGAANYTAALHLMRTGAAGVLV-GFGGGAVSANRNTIGVHAP 241 Query: 234 IGIVFQDWGIPTPLSLEMARPYCNE------AQFIASGGLRNGVDILKSIILGASLGGLA 287 + D + AR + Q IA GG+ + +K+ LGA L Sbjct: 242 MATAIAD--------VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKAFALGADAVMLG 293 Query: 288 SPFLKPA 294 SP + + Sbjct: 294 SPLARAS 300 >gi|88703505|ref|ZP_01101221.1| ferredoxin-dependent glutamate synthase [Congregibacter litoralis KT71] gi|88702219|gb|EAQ99322.1| ferredoxin-dependent glutamate synthase [Congregibacter litoralis KT71] Length = 534 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 98/305 (32%), Gaps = 44/305 (14%) Query: 27 DDWHLIHRALPEISFDEVD--PSVEFLGKKLSFP-----LLISSMTGGN--NKMIERINR 77 D + I ++ + E+D P V G + + P L IS+M+ G+ + + +NR Sbjct: 117 DGYEWIGHSIAARNISELDHDPRVSIGGPQCTQPYAAALLNISAMSFGSLSSNAVRALNR 176 Query: 78 NLAIAAEKTKVAMAVGSQRVMFSD---------------HNAIKSFELRQYAPHTVLISN 122 A G + SF +A L + Sbjct: 177 GAAAGGFYHNTGEG-GVSDFHLEHAGDLVWQIGTGYFGCRASDGSFSPEAFAKTATLPT- 234 Query: 123 LGAVQLNYDFGVQ----KAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF---ADLSSKI 175 + +++ G + A + E++ P+ ++ F L + Sbjct: 235 VRMIEIKLSQGAKPGHGGILPASKNTELIARIRQVPVGTEVVSPSAHSAFSSPRGLLEFV 294 Query: 176 ALLSSAMDV-PLLLKEVGCGLSSM----DIELGLKSGIRYFDI-AGRGGTSWSRIESHRD 229 A L + P+ K S L + + G GGT + +E Sbjct: 295 AQLRELSEGKPVGFKLCVGRESEFIAICKAMLETGITPDFVTVDGGEGGTGAAPLE---- 350 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASP 289 + +G+ +D G+ ++ + IASG + + K++ LGA L A Sbjct: 351 YSNSVGMPLRD-GLAFVVNTLEGFGVREHIKVIASGKIITAFHMAKALALGADLCNSARG 409 Query: 290 FLKPA 294 + Sbjct: 410 MMLAL 414 >gi|330444575|ref|YP_004377561.1| IMP dehydrogenase [Chlamydophila pecorum E58] gi|328807685|gb|AEB41858.1| IMP dehydrogenase [Chlamydophila pecorum E58] Length = 355 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 33/263 (12%), Positives = 66/263 (25%), Gaps = 75/263 (28%) Query: 126 VQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVP 185 + G +A ++ A +Q ++ + + + + S Sbjct: 92 IAAAIGIGNPGIERAQALVEAG--------VQALVIDTAHAHSKSVLQTAIQIKSLFPAT 143 Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ G ++ + G+ + G+ + + G P Sbjct: 144 TLI--AGNIVTGEAAKQLADVGVDAVKVGIGPGSICTT------------RIVSGVGCPQ 189 Query: 246 PLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLASPFL------------ 291 ++ IA GG+R DI+K++ GA L Sbjct: 190 ITAILSVSQALQGSSVSLIADGGMRYSGDIVKALAAGADCVMLGGMLAGTKEAPGEIVYI 249 Query: 292 --------------------------------KPAMDSSDA-------VVAAIESLRKEF 312 K + + V + + Sbjct: 250 EEQAYKKYRGMGSIGAMKQGSADRYFQKQEQKKFIPEGVEGFVPFKGSVKDVLFHILGGL 309 Query: 313 IVSMFLLGTKRVQELYLNTALIR 335 M LG K ++EL NT I+ Sbjct: 310 RSGMGYLGAKTLKELKKNTTFIK 332 >gi|260433752|ref|ZP_05787723.1| inosine-5'-monophosphate dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260417580|gb|EEX10839.1| inosine-5'-monophosphate dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 482 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 28/233 (12%) Query: 73 ERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDF 132 E I+ A EK V A G + + + ++ + + A D Sbjct: 167 EAISLMKARRIEKLLVVDANGKLTGLLTLKDTEQAVLNPTACKDDLGRLRVAAATSVGDA 226 Query: 133 GVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMD-VPLLLKEV 191 G +++ + V G D + + + + + + + + + V ++ V Sbjct: 227 GFERSERLVDA-GVDIIVV----------DTAHGHSQGVLDAVKRIKALSNEVQIIAGNV 275 Query: 192 GCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM 251 G + +G + G+ + + G+P ++ Sbjct: 276 ATG---DATRALIDAGADAVKVGIGPGSICTT------------RMVAGVGVPQLTAIMD 320 Query: 252 ARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAA 304 + IA GG++ D K+I GAS + + +S V+ Sbjct: 321 CAAAAGDVPVIADGGIKFSGDFAKAIAAGAS-CAMVGSMIAGTDESPGEVILY 372 >gi|259417078|ref|ZP_05740997.1| glutamate synthase (NADPH) large chain [Silicibacter sp. TrichCH4B] gi|259345984|gb|EEW57798.1| glutamate synthase (NADPH) large chain [Silicibacter sp. TrichCH4B] Length = 1510 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 32/172 (18%) Query: 183 DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWG 242 + +K V K+ I+G G + + + + G Sbjct: 1022 RCKVTVKLVASSGVGTIAAGVAKAKADIILISGHNGGTGASP----ATSIKYCGLPWEMG 1077 Query: 243 IPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP--------- 293 + + GGLR G DI+ + ++GA G+ + L Sbjct: 1078 LTEAHQVLAMNNLRGRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQC 1137 Query: 294 --------------AMDS-----SDAVVAAIESLRKEFIVSMFLLGTKRVQE 326 A+ +D VV I +E + +G + + E Sbjct: 1138 QSNTCPVGVCTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDE 1189 >gi|315453154|ref|YP_004073424.1| inosine-5'-monophosphate dehydrogenase [Helicobacter felis ATCC 49179] gi|315132206|emb|CBY82834.1| inosine-5'-monophosphate dehydrogenase [Helicobacter felis ATCC 49179] Length = 481 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 71/196 (36%), Gaps = 26/196 (13%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 + R PH + G +++ G + +A ++ A L L+ + + Sbjct: 200 QKRIEYPHANKDA-FGRLRVGAAIGANQLDRARALVKAGVDALVLDSA--------HGHS 250 Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 ++ S + + ++V VG +++ + + +G + G+ + Sbjct: 251 RNILSTLEEIKKELEV---DVVVGNVVTAQATKDLISAGADGVKVGIGPGSICTT----- 302 Query: 229 DLESDIGIVFQDWGIPTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P +++ ++ IA GG+R D+ K++ +GAS + Sbjct: 303 -------RIVAGVGMPQISAIDECYQEAKKHDVPVIADGGIRYSGDVAKALAVGASCVMV 355 Query: 287 ASPFLKPAMDSSDAVV 302 S D ++ Sbjct: 356 GSLIAGTQESPGDTLI 371 >gi|229043208|ref|ZP_04190930.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus AH676] gi|228726069|gb|EEL77304.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus AH676] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAQVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGVIPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|206968518|ref|ZP_03229474.1| nitropropane dioxygenase [Bacillus cereus AH1134] gi|206737438|gb|EDZ54585.1| nitropropane dioxygenase [Bacillus cereus AH1134] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGAVPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|268318956|ref|YP_003292612.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii FI9785] gi|262397331|emb|CAX66345.1| guanosine 5'-monophosphate oxidoreductase [Lactobacillus johnsonii FI9785] Length = 330 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 82/268 (30%), Gaps = 44/268 (16%) Query: 26 FDDWHLIHRALPEISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEK 85 +DD L+ S E + V+F + P++ M I+ +LAI + Sbjct: 12 YDDIQLVPNKCIIKSRKEANTGVKFGSRTFKIPVV-------PANMESVIDEDLAIWLAE 64 Query: 86 TKVAMAVGSQRVMFSDHNAIKSFELRQYAPHTVLISNL--GAVQLNYDFGVQKAHQAVHV 143 + F + L +++ G YDF A + Sbjct: 65 NG-----YYYVMHRFYPEKRADF--IKMMHDKGLFASISVGIKDSEYDFIDYLAKE---- 113 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFAD-LSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL 202 N + E + +D + I + + L G + + Sbjct: 114 ----------NIIPEYTTIDVAHGHSDYVIKMIKYIKEKLPDTFLT--AGNIATPEAVRE 161 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFI 262 +G + G + + G W + +L M + I Sbjct: 162 LENAGADATKVGVGPGRACIT-------KLKTGFGTGGWQL---AALRMCSKAARK-PLI 210 Query: 263 ASGGLRNGVDILKSIILGASLGGLASPF 290 A GG+R+ DI KS+ GAS+ + S F Sbjct: 211 ADGGIRHNGDIAKSVRFGASMVMIGSLF 238 >gi|226309157|ref|YP_002769117.1| glutamate synthase [Rhodococcus erythropolis PR4] gi|226188274|dbj|BAH36378.1| putative glutamate synthase [Rhodococcus erythropolis PR4] Length = 1822 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A + +++K V K+G + Sbjct: 1109 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARIRVIVKLVSSEGIGTIAVGVAKAGADVIN 1168 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A + SG + G Sbjct: 1169 VAGNTGGTGAASVTSLKYAGRA-----AEVGIAEVHQALCANGLRQKVVLRCSGAHQTGS 1223 Query: 272 DILKSIILGASLGGLASPFL-----------------------KPAMDSSDAVVAAIESL 308 DI+ S +LGA + L + A+ + ++ Sbjct: 1224 DIITSALLGADSFEFGTSALMMMGCVMAKNCNIKCPAGLTTNPELFDGDPRAMAQYLLNI 1283 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 E + LG + +QE T L+ Sbjct: 1284 AHETRELLANLGMRSLQEARGRTDLLH 1310 >gi|224024556|ref|ZP_03642922.1| hypothetical protein BACCOPRO_01282 [Bacteroides coprophilus DSM 18228] gi|224017778|gb|EEF75790.1| hypothetical protein BACCOPRO_01282 [Bacteroides coprophilus DSM 18228] Length = 324 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 49/313 (15%) Query: 46 PSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAA--------------EKTKVAMA 91 + + G L P++ISS G +I A + Sbjct: 4 LTTTYAGLTLQNPIIISSS--GLTNSAAKIKELEKSGAGAVVLKSVFEEQINMQAGNMQG 61 Query: 92 VGS------QRVMFSDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAV--HV 143 GS H + L Q A + I + ++ D + AV Sbjct: 62 YGSPEADDYLGAYVRSHALNEHIALIQEAKKSCSIPIIASINCYSD--NEWVDFAVMMEQ 119 Query: 144 LGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMD-IEL 202 GAD L +++ LQ + + + + +P+++K + + I Sbjct: 120 AGADALEINILSLQTSKDYTFGSFEQRHIDILRHIKKVVKIPVIMKLGSNLTNPIALINQ 179 Query: 203 GLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-------ARPY 255 +G + R + + + + D ++ + TP L A Sbjct: 180 LYANGAAAVVLFNR----FYQPDINIDTQTFTSSNV----MSTPNELADKIRWTAIASSQ 231 Query: 256 CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVS 315 + + SGG+ ++KSI+ GA+ + S + IE++++E V Sbjct: 232 IPQLDYAVSGGVHCAKGVIKSILAGATAVQICSVIYQYGN-------KEIENMKRELSVW 284 Query: 316 MFLLGTKRVQELY 328 M G + + + Sbjct: 285 MEENGYESISQFK 297 >gi|218896398|ref|YP_002444809.1| nitropropane dioxygenase [Bacillus cereus G9842] gi|218545435|gb|ACK97829.1| nitropropane dioxygenase [Bacillus cereus G9842] Length = 363 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 84/263 (31%), Gaps = 54/263 (20%) Query: 53 KKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHNAI--KSFEL 110 K+ +P++ + M G L A + +G+ + I + + Sbjct: 11 LKIEYPVVQAGMAG------AITTPELVAAVSNSG---GLGTLGAGYMSPEQICEAIYRI 61 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEI-IQPNGNTNFA 169 R+ +V L +Q + V+ A L +N +E+ I+ G Sbjct: 62 RELTDKPF------SVNLLVTKEIQIEEEKVN--EAKVLLSGVN--RELGIEVEGTLKLP 111 Query: 170 DLSSKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIELGLKSGIRY 210 + + VP++ +K +G + ++ + G+ Sbjct: 112 KSYKEQLQVLLDEKVPVVSFAFQTLEKEEINDLKRSGIKVIGTATHVKEAKVLAELGVDI 171 Query: 211 FDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 G GG + I RD I T + +A+GG+ Sbjct: 172 IIGQGSEAGGHRGTFIGKERDAM-----------IGTFALVPQLVEAVPHIPIVAAGGVM 220 Query: 269 NGVDILKSIILGASLGGLASPFL 291 NG ++ ++ LGA + S FL Sbjct: 221 NGQGLVAALALGAEGVQMGSAFL 243 >gi|154257295|gb|ABS72011.1| putative glycolate oxidase-like FMN-binding domain protein [Olea europaea] Length = 215 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 24/110 (21%) Query: 159 IIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGG 218 + + + + L S +P+L+K V +++ D L +++G ++ G Sbjct: 129 YVAGQIDRTLSW--KDVKWLQSITSMPILVKGV---ITAEDTRLAIQNGAAGIIVSNHGA 183 Query: 219 TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEM-ARPYCNEAQFIASGGL 267 + T ++LE + GG+ Sbjct: 184 RQLDYVP------------------STIMALEEVVKAAQGRVPVFLDGGV 215 >gi|73541545|ref|YP_296065.1| inositol-5-monophosphate dehydrogenase [Ralstonia eutropha JMP134] gi|72118958|gb|AAZ61221.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha JMP134] Length = 487 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 18/124 (14%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIEL-GLKSGIRYFDIAGRGGTSWSRIESHR 228 + ++ + ++ VG +++ D ++ G + G+ + Sbjct: 254 GVLDRVRWVKQNFPQ---VQVVGGNIATGDAARALVEHGADGVKVGIGPGSICTT----- 305 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T +S IA GG+R D+ K++ GA + Sbjct: 306 -------RIVAGVGVPQITAVSNVAEALKGTGVPLIADGGVRYSGDVAKALAAGAHTVMM 358 Query: 287 ASPF 290 F Sbjct: 359 GGMF 362 >gi|300775749|ref|ZP_07085610.1| glutamate synthase domain protein [Chryseobacterium gleum ATCC 35910] gi|300505776|gb|EFK36913.1| glutamate synthase domain protein [Chryseobacterium gleum ATCC 35910] Length = 505 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 28/163 (17%) Query: 148 GLFLHLNPLQEIIQPNGNTNFA---DLSSKIALLSSAMDV-PLLLKE-VGCGLSSMDIEL 202 H+ P +I P +T F+ L + L P+ K +G DI + Sbjct: 260 AAIRHVTPGMTVISPPSHTAFSDATGLLRFVQQLRDLSGGKPVGFKLCIGDTKEFEDICV 319 Query: 203 ---GLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQD-WGIPTPLSLEMARP--- 254 LK + I G GGT + E F D G+P +L Sbjct: 320 QMNVLKIYPDFITIDGAEGGTGAAPPE------------FSDGVGMPLEPALIFVNRTLN 367 Query: 255 ---YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 ++ + IASG + +DIL++I +GA + A F+ Sbjct: 368 NYNVRSKLRVIASGKVLTSLDILRAIAMGADMCNNARGFMFSL 410 >gi|320006664|gb|ADW01514.1| ferredoxin-dependent glutamate synthase [Streptomyces flavogriseus ATCC 33331] Length = 504 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 13/188 (6%) Query: 109 ELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNF 168 +L+ + + + G+ V V + ++ P+ +T F Sbjct: 209 KLKSVVASGPVKAIEIKLSQGAKPGLGGMLPGVKVTDEIAGIRGIPAGKDCASPSRHTAF 268 Query: 169 ADLSSKI---ALLSSAMDVPLLLKE-VGCGLSSMDIELGLKSGIRYFDI----AGRGGTS 220 D+ S + LL++ +P+ +K +G ++ ++ G R D G GGT Sbjct: 269 HDVDSMLDFVELLATETGLPVGIKSAIGEMGFWEELATLMERGDRGVDFVTIDGGEGGTG 328 Query: 221 WSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILG 280 + + + F+ G S+ R ++ FI SG L + + + LG Sbjct: 329 AA----PLIFADSVSLPFRM-GFSRVYSVFAERGLTDDITFIGSGKLGLPENAVVAFALG 383 Query: 281 ASLGGLAS 288 + + Sbjct: 384 VDMVNVGR 391 >gi|317046688|ref|YP_004114336.1| glutamate synthase [Pantoea sp. At-9b] gi|316948305|gb|ADU67780.1| Glutamate synthase (ferredoxin) [Pantoea sp. At-9b] Length = 1843 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 31/207 (14%) Query: 155 PLQEIIQPNGNTNFADLSSKIALL--SSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFD 212 P E++ P + + + L+ A V +++K V K+G + Sbjct: 1128 PGVELVSPPPHHDTYSIEDLAQLIHDCKAARVRVIVKLVSSEGIGTIAVGVAKAGADVIN 1187 Query: 213 IAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGV 271 +AG GGT + + S + + GI A ++ Q SG + G Sbjct: 1188 VAGNTGGTGAASVTSLKYTGR-----VAEIGIAEVHQALCANGLRDKVQLRCSGAQQTGS 1242 Query: 272 DILKSIILGAS---LGGLASPFLK-------------PAMDSSDA-------VVAAIESL 308 D++KS +LG G A LK +++A + ++ Sbjct: 1243 DVIKSALLGGDSFEFGTTALMMLKCVMAKNCNVKCPAGLTTNAEAFDGDPRQLAQYFINV 1302 Query: 309 RKEFIVSMFLLGTKRVQELYLNTALIR 335 +E + LG + ++E + L+ Sbjct: 1303 AQEVREFLARLGLRSLREARGRSDLLH 1329 >gi|257454912|ref|ZP_05620160.1| glutamate synthase [NADPH] large chain [Enhydrobacter aerosaccus SK60] gi|257447622|gb|EEV22617.1| glutamate synthase [NADPH] large chain [Enhydrobacter aerosaccus SK60] Length = 1489 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 35/179 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT+ S + S + G+ Sbjct: 1003 VSVKLVSRPGVGTIATGVAKAYADLITISGYDGGTAASPLSSI-----HYAGSPWELGLS 1057 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL------------- 291 ++ + GGL+ G+D++K+ ILGA G + + Sbjct: 1058 EAHQSLRVNGLRHKVRVQTDGGLKTGLDVVKAAILGAESFGFGTTPMIAVGCKYLRICHL 1117 Query: 292 ----------------KPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 + + ++ ++ + +E + LG + ++EL T L+ Sbjct: 1118 NNCPTGVATQKSELRDEHFIGEAEMLINFFRFVAQETREWLAALGVRSMEELVGRTDLL 1176 >gi|207858578|ref|YP_002245229.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206710381|emb|CAR34739.1| glutamate synthase [NADPH] large chain precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 1486 Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|299753638|ref|XP_002911893.1| glutamate synthase [Coprinopsis cinerea okayama7#130] gi|298410392|gb|EFI28399.1| glutamate synthase [Coprinopsis cinerea okayama7#130] Length = 2127 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + I+G GGT + R + + G+ Sbjct: 1115 LVSEVGVGIVASGVA---KAKADHILISGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1166 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G +R G DI + +LGA G A+ Sbjct: 1167 THQTLVLNDLRGRVTVQTDGQIRTGRDIAVACLLGAEEWGFATTPLIAMGCIMMRKCHLN 1226 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ + V+ + +E M LG + + E+ Sbjct: 1227 TCPVGIATQDPQLRAKFAGQPEQVINFFYYIAEELRGYMAKLGFRTINEM 1276 >gi|307152880|ref|YP_003888264.1| dihydroorotate oxidase [Cyanothece sp. PCC 7822] gi|306983108|gb|ADN14989.1| dihydroorotate oxidase [Cyanothece sp. PCC 7822] Length = 346 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 103/308 (33%), Gaps = 57/308 (18%) Query: 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINR----NLAIAAE---------------- 84 D S +LG L PL++ G + E IN A AA Sbjct: 2 DISTTYLGLNLRSPLIV----GSAGPLTEDINNIKRIEEAGAAAVVLHSFFEEQLRVEQL 57 Query: 85 --KTKVAMAVGSQRVMFSDHNAIKSFEL--------RQYAPHTVLISNLGAVQLNYDFGV 134 + S + + F + + A V I + ++ G Sbjct: 58 ELHHHLTHGTESFAEALTYFPEPEIFHVGAEEYLNHIRQAKEQVKIPIIASLNGVSTGGW 117 Query: 135 QKAHQAVHVLGADGLFLHL----NPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKE 190 + + + GAD L L++ N L E+ N+ + ++ S + +P+ +K Sbjct: 118 LEYARKIEQAGADALELNVYYLPNDL-EMSGAQVEQNY---VDILRIIKSEISIPVAMKL 173 Query: 191 VGCGLS-SMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 + + + ++G + R + + + + I V + TP ++ Sbjct: 174 SPYFSNMANMAKQLAEAGADGLVLFNR----FYQPDIELEHLEVIPNVL----LSTPQAM 225 Query: 250 EMARPYCN------EAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVA 303 + + F A G+ +D+LK +++GA L S L+ ++ + Sbjct: 226 RLPMHWIGMLYGRVNVDFAAISGIHTSLDVLKMLMVGAKATMLVSVLLRHGINEIRKIEQ 285 Query: 304 AIESLRKE 311 + +E Sbjct: 286 NLIHWLQE 293 >gi|30019518|ref|NP_831149.1| nitropropane dioxygenase/trans-enoyl-CoA reductase family protein [Bacillus cereus ATCC 14579] gi|229126782|ref|ZP_04255794.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus BDRD-Cer4] gi|29895062|gb|AAP08350.1| Nitropropane dioxygenase / Trans-enoyl-CoA reductase family [Bacillus cereus ATCC 14579] gi|228656722|gb|EEL12548.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus BDRD-Cer4] Length = 363 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 149 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 197 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 198 FALIPQLVGAVPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 243 >gi|28199329|ref|NP_779643.1| inositol-5-monophosphate dehydrogenase [Xylella fastidiosa Temecula1] gi|182682054|ref|YP_001830214.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa M23] gi|28057435|gb|AAO29292.1| inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa Temecula1] gi|182632164|gb|ACB92940.1| inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa M23] gi|307578322|gb|ADN62291.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 485 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 60/220 (27%), Gaps = 69/220 (31%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGL-KSGIRYFDIAGRGGTSWSRIESHR 228 + ++A + L+ +G + + D L L G + G+ + Sbjct: 255 GVLDRVAWIKRYFPQ---LQVIGGNIVTGDAALALMDVGADAVKVGVGPGSICTT----- 306 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCNE-AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P +++M + IA GG+R DI K++ GAS + Sbjct: 307 -------RMVAGVGVPQITAVQMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIG 359 Query: 288 SPFL---------------------------------------------KPAMDSSDA-- 300 F K + + Sbjct: 360 GLFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRYFQEASDVDKLVPEGIEGRV 419 Query: 301 -----VVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 V + L +M +G ++E+ ++ Sbjct: 420 PYRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVK 459 >gi|327479227|gb|AEA82537.1| glutamate synthase subunit alpha [Pseudomonas stutzeri DSM 4166] Length = 1482 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ I+G GGT S + S R S + + Sbjct: 996 VSVKLVAEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIRYAGSPWELGLAE---- 1051 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA---------- 294 T +L + + GGL+ G+D++K+ ILGA G + + Sbjct: 1052 THQTLR-GNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMIALGCKYLRICHL 1110 Query: 295 -------------------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + + D VV + + +E + LG + + EL T L+ Sbjct: 1111 NNCATGVATQNEQLRKDHFIGTVDMVVNFFQFVAEETREWLAKLGVRSLGELIGRTDLLE 1170 >gi|229149668|ref|ZP_04277898.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus m1550] gi|228633699|gb|EEK90298.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus cereus m1550] Length = 342 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 128 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 176 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 177 FALIPQLVGAVPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 222 >gi|284992815|ref|YP_003411369.1| inosine-5'-monophosphate dehydrogenase [Geodermatophilus obscurus DSM 43160] gi|284066060|gb|ADB76998.1| inosine-5'-monophosphate dehydrogenase [Geodermatophilus obscurus DSM 43160] Length = 501 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 17/124 (13%) Query: 169 ADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +A + + V ++ V + + + +G+ + G+ + Sbjct: 264 RAVLEMVARVKADFGVQVVGGNVA---TRAGAQALVDAGVDAVKVGVGPGSICTT----- 315 Query: 229 DLESDIGIVFQDWGIPTPLSLEMARPYCN--EAQFIASGGLRNGVDILKSIILGASLGGL 286 V G+P ++ A IA GGL+ DI K+++ GA + Sbjct: 316 -------RVVAGVGVPQVTAIYEAALAARPAGVPVIADGGLQYSGDIAKALVAGADTVMI 368 Query: 287 ASPF 290 F Sbjct: 369 GGLF 372 >gi|322618307|gb|EFY15198.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322626790|gb|EFY23587.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631358|gb|EFY28118.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322643373|gb|EFY39937.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647055|gb|EFY43556.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322655050|gb|EFY51361.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657653|gb|EFY53921.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664149|gb|EFY60347.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667432|gb|EFY63594.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674680|gb|EFY70772.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|323195869|gb|EFZ81040.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198986|gb|EFZ84083.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323211285|gb|EFZ96129.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323224006|gb|EGA08299.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323242392|gb|EGA26418.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246902|gb|EGA30868.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|261212133|ref|ZP_05926419.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC341] gi|262402848|ref|ZP_06079409.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC586] gi|260838741|gb|EEX65392.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC341] gi|262351630|gb|EEZ00763.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC586] Length = 487 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 63/220 (28%), Gaps = 68/220 (30%) Query: 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRD 229 + +I +A ++ G ++ +++G+ + G+ + Sbjct: 256 GVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPGSICTT------ 307 Query: 230 LESDIGIVFQDWGIPTPLSLEMARPYCNE--AQFIASGGLRNGVDILKSIILGASLGGLA 287 + G+P ++ A E IA GG+R DI K+I GAS + Sbjct: 308 ------RIVTGVGVPQVTAIADAAGVAEEFGIPVIADGGIRFSGDISKAIAAGASCVMVG 361 Query: 288 SPFL---------------------------------------------KPAMDSSDAVV 302 S F K + + + Sbjct: 362 SMFAGTEEAPGEVILFQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRI 421 Query: 303 AA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 A ++ + + M L G+ V++L +R Sbjct: 422 AYKGHLKEIIHQQMGGLRSCMGLTGSASVEDLRTKAQFVR 461 >gi|238910124|ref|ZP_04653961.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|228964430|ref|ZP_04125544.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar sotto str. T04001] gi|228795287|gb|EEM42779.1| 2-nitropropane dioxygenase (Nitroalkane oxidase) [Bacillus thuringiensis serovar sotto str. T04001] Length = 342 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 188 LKEVGCGLSSMDIELGLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPT 245 +K +G + ++ + G+ G GG + I RD I T Sbjct: 128 IKVIGTATHVKEAKVLAELGVDIIIGQGSEAGGHRGTFIGKERDAM-----------IGT 176 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 + +A+GG+ NG ++ ++ LGA + S FL Sbjct: 177 FALIPQLVGAVPHIPIVAAGGVMNGQGLVAALALGAEGVQMGSAFL 222 >gi|224585127|ref|YP_002638926.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469655|gb|ACN47485.1| glutamate synthase [NADPH] large chain precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|205354231|ref|YP_002228032.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274012|emb|CAR39018.1| glutamate synthase [NADPH] large chain precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629353|gb|EGE35696.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|126737809|ref|ZP_01753539.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. SK209-2-6] gi|126721202|gb|EBA17906.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. SK209-2-6] Length = 482 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 17/139 (12%) Query: 167 NFADLSSKIALLSS-AMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIE 225 + A + + + S +V ++ V ++ + + +G + G+ + Sbjct: 250 HSAGVIDAVKRIKSFNSNVQVVAGNVA---TAEATKALIDAGADAVKVGIGPGSICTT-- 304 Query: 226 SHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGG 285 + G+P ++ E IA GG++ D K+I GAS Sbjct: 305 ----------RMVAGVGVPQLTAIMDCAAAAGETPVIADGGIKFSGDFAKAIAAGAS-CA 353 Query: 286 LASPFLKPAMDSSDAVVAA 304 + + +S V+ Sbjct: 354 MVGSMIAGTDESPGEVILY 372 >gi|62181838|ref|YP_218255.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129471|gb|AAX67174.1| glutamate synthase, large subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716327|gb|EFZ07898.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|16762092|ref|NP_457709.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143581|ref|NP_806923.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213424399|ref|ZP_03357222.1| glutamate synthase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|25284763|pir||AI0906 glutamate synthase (NADPH) (EC 1.4.1.13) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504395|emb|CAD07847.1| glutamate synthase [NADPH] large chain precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29139216|gb|AAO70783.1| glutamate synthase [NADPH] large chain precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 1486 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 LLLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIP 244 + +K V K+ IAG GGT S + S + G+ Sbjct: 996 ISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV-----KYAGCPWELGLV 1050 Query: 245 TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLA-SPFLKP---------- 293 +A ++ + GGL+ GVDI+K+ ILGA G P + Sbjct: 1051 ETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL 1110 Query: 294 -------AMDSSD-----------AVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 A V E + +E M LG R+ +L T L++ Sbjct: 1111 NNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170 >gi|47566255|ref|ZP_00237283.1| nitropropane dioxygenase / trans-enoyl-CoA reductase family [Bacillus cereus G9241] gi|47556808|gb|EAL15139.1| nitropropane dioxygenase / trans-enoyl-CoA reductase family [Bacillus cereus G9241] Length = 364 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 87/271 (32%), Gaps = 58/271 (21%) Query: 44 VDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDHN 103 +D ++ +P++ + M G L A + +G+ + Sbjct: 7 IDT------LQIKYPIIQAGMAG------AITTPELVAAVSNSG---GLGTLGAGYMSPE 51 Query: 104 AIKS--FELRQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQ 161 I+ +++R+ V L +Q + +++ A GL +N I + Sbjct: 52 QIRDAIYKIREQTDKPF------GVNLLLTKEIQIEEEKINL--AKGLLSGVNREFGIEE 103 Query: 162 PNGNTNFADLSSKIALLSSAMDVPLL-------------------LKEVGCGLSSMDIEL 202 ++ +L +VP++ +K +G + ++ Sbjct: 104 EEQLKLPKSYKEQLQVLVEE-NVPVVSFAFQTLEKEEIDDLKRRGIKVIGTATHVAEAKV 162 Query: 203 GLKSGIRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQ 260 + G+ G GG + I +D I T + Sbjct: 163 LAELGVDIIVGQGSEAGGHRGTFIGKEQDAL-----------IGTFALIPQLVAAVPHIP 211 Query: 261 FIASGGLRNGVDILKSIILGASLGGLASPFL 291 +A+GG+ NG ++ + LGA + S FL Sbjct: 212 IVAAGGVMNGQGLVAAFTLGAEAVQMGSAFL 242 >gi|332030526|gb|EGI70214.1| Putative glutamate synthase [Acromyrmex echinatior] Length = 2061 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 44/220 (20%) Query: 152 HLNPLQEIIQPNGNTNFADLSSKIALL----SSAMDVPLLLKEVGCGLSSMDIELGLKSG 207 H P +I P + + + L+ + + + +K V + K Sbjct: 1008 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVAAGVAKGK 1067 Query: 208 IRYFDIAGR-GGT---SWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIA 263 + I+G GGT SW+ I+S + + GI + + A Sbjct: 1068 AEHVVISGHDGGTGASSWTGIKS--------AGLPWELGIAETHQVLTLNNLRSRMIVQA 1119 Query: 264 SGGLRNGVDILKSIILGASLGGLAS---------------------------PFLKPAMD 296 G LR G DI+ + +LGA G ++ P L+ + Sbjct: 1120 DGQLRTGFDIVVAALLGADEFGFSTAPLIAMGCTMMRKCHLNTCPVGIATQDPILRKKFE 1179 Query: 297 S-SDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALIR 335 + V+ +L +E M LG ++ Q+L T L++ Sbjct: 1180 GKPEHVINFFFALAEEVRSHMANLGIRKFQDLIGRTDLLK 1219 >gi|324989569|gb|EGC21515.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis SK353] gi|325686467|gb|EGD28496.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis SK72] Length = 507 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 16/126 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + A + KIA + S L+ G ++ ++G+ + G+ + Sbjct: 272 HSAGVLRKIAEIRSHFPDRTLI--AGNIATAEGARALYEAGVDVVKVGIGPGSICTT--- 326 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 V G+P ++ A + IA GG++ DI+K++ G + Sbjct: 327 ---------RVIAGVGVPQVTAIYDAAAVARKYGKTIIADGGIKYSGDIVKALAAGGNAV 377 Query: 285 GLASPF 290 L S F Sbjct: 378 MLGSMF 383 >gi|323350819|ref|ZP_08086478.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis VMC66] gi|322122993|gb|EFX94696.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis VMC66] Length = 507 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 16/126 (12%) Query: 167 NFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIES 226 + A + KIA + S L+ G ++ ++G+ + G+ + Sbjct: 272 HSAGVLRKIAEIRSHFPDRTLI--AGNIATAEGARALYEAGVDVVKVGIGPGSICTT--- 326 Query: 227 HRDLESDIGIVFQDWGIPTPLSLEMARPYCNEA--QFIASGGLRNGVDILKSIILGASLG 284 V G+P ++ A + IA GG++ DI+K++ G + Sbjct: 327 ---------RVIAGVGVPQVTAIYDAAAVARKYGKTIIADGGIKYSGDIVKALAAGGNAV 377 Query: 285 GLASPF 290 L S F Sbjct: 378 MLGSMF 383 >gi|315222252|ref|ZP_07864158.1| dihydroorotate dehydrogenase 1A [Streptococcus anginosus F0211] gi|315188585|gb|EFU22294.1| dihydroorotate dehydrogenase 1A [Streptococcus anginosus F0211] Length = 311 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 244 PTPLSLEMA--RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAV 301 PT L+ A + Q I +GG+ G D + I+ GAS+ + + K + V Sbjct: 225 PTALANVHAFYQRLNPTIQIIGTGGVLTGRDAFEHILCGASMVQVGTTLHK------EGV 278 Query: 302 VAAIESLRKEFIVSMFLLGTKRVQELY 328 A E + +E M G + +++ Sbjct: 279 -GAFERITEELKAIMLEKGYESIEDFR 304 >gi|170094790|ref|XP_001878616.1| NADPH-dependent glutamate synthase [Laccaria bicolor S238N-H82] gi|164647070|gb|EDR11315.1| NADPH-dependent glutamate synthase [Laccaria bicolor S238N-H82] Length = 2122 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 55/170 (32%), Gaps = 37/170 (21%) Query: 187 LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRIESHRDLESDIGIVFQDWGIPT 245 L+ EVG G+ + + K+ + IAG GGT + R + + G+ Sbjct: 1087 LVSEVGVGIVASGVA---KAKADHILIAGHDGGTG-----ASRWTGIKYAGLPWELGLAE 1138 Query: 246 PLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLAS----------------- 288 + G +R G DI + +LGA G A+ Sbjct: 1139 THQTLVLNDLRGRVTVQTDGQIRTGRDIAIACLLGAEEWGFATTPLIAMGCIMMRKCHLN 1198 Query: 289 ----------PFLKPAMDSS-DAVVAAIESLRKEFIVSMFLLGTKRVQEL 327 P L+ + V+ L +E M LG + + E+ Sbjct: 1199 TCPVGIATQDPQLRAKFAGQPEQVINFFYYLAEELRGYMAKLGFRTINEM 1248 >gi|238794822|ref|ZP_04638423.1| Inosine-5'-monophosphate dehydrogenase [Yersinia intermedia ATCC 29909] gi|238725835|gb|EEQ17388.1| Inosine-5'-monophosphate dehydrogenase [Yersinia intermedia ATCC 29909] Length = 464 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 59/222 (26%), Gaps = 72/222 (32%) Query: 170 DLSSKIALLSSAM-DVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHR 228 + +I + ++ ++ V G + +G+ + G+ + Sbjct: 233 GVLQRIRETRAKYPNLQIVGGNVATG---AGAKALADAGVSAVKVGIGPGSICTT----- 284 Query: 229 DLESDIGIVFQDWGIP--TPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 + G+P T ++ + IA GG+R DI K+I GAS + Sbjct: 285 -------RIVTGVGVPQITAIADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCV-M 336 Query: 287 ASPFL----------------------------------------------KPAMDSSDA 300 L K + + Sbjct: 337 VGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEG 396 Query: 301 VVAA---IESLRKE----FIVSMFLLGTKRVQELYLNTALIR 335 VA ++ + + M L G + EL +R Sbjct: 397 RVAYKGLLKEIVHQQMGGLRSCMGLTGCATINELRTKAEFVR 438 >gi|114705445|ref|ZP_01438353.1| glutamate synthase, large subunit [Fulvimarina pelagi HTCC2506] gi|114540230|gb|EAU43350.1| glutamate synthase, large subunit [Fulvimarina pelagi HTCC2506] Length = 1579 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 38/191 (19%) Query: 167 NFADLSSKIALLSSAMDVPL-LLKEVGCGLSSMDIELGLKSGIRYFDIAGR-GGTSWSRI 224 + A L + ++ A DV + L+ EVGCG K+ + I+G GGT S + Sbjct: 1050 DLAQLIYDLKNVNPAADVSVKLVSEVGCG---TVAAGVAKARADHVTISGYDGGTGASPL 1106 Query: 225 ESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLG 284 S + S + + T +L + + GGLR G D+L +LGA Sbjct: 1107 TSIKHAGSPWEMGLAE----TQQTL-VLNGLRSRICLQVDGGLRTGRDVLIGALLGADEF 1161 Query: 285 GLAS---------------------------PFLKPAMDS-SDAVVAAIESLRKEFIVSM 316 G ++ P L+ + VV + +E + M Sbjct: 1162 GFSTAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRQRFKGAPEHVVNYFFYVAEEVRMLM 1221 Query: 317 FLLGTKRVQEL 327 +G K + +L Sbjct: 1222 AEMGVKSLADL 1232 >gi|223939658|ref|ZP_03631532.1| IMP dehydrogenase family protein [bacterium Ellin514] gi|223891709|gb|EEF58196.1| IMP dehydrogenase family protein [bacterium Ellin514] Length = 392 Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 112/387 (28%), Gaps = 101/387 (26%) Query: 21 RNKKFFDDWHLIHRALPEISFDEVDPSVEFL-------GKKLSFPLLISSMTG------- 66 R FD+ L+ + I+ +EVD S FL KL P++ S+M G Sbjct: 12 RVTYGFDEIALVPGDVT-INPNEVDTS--FLIPRKDGSHIKLKIPIIASAMDGVTDVKFC 68 Query: 67 ---GNNKMIERIN------------RNLAIAAEKTKVAMAVGSQRVMFSD-HNAIKSFEL 110 G + IN L + K + Q++ + + Sbjct: 69 VEMGKLGGLGVINLEGVQTRYENPSEVLEQVVKADKDEVTSLIQKLYLEPIKEELIGRRV 128 Query: 111 RQYAPHTVLISNLGAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFAD 170 + VL + Q F A