HHsearch alignment for GI: 254781024 and conserved domain: CHL00065
>CHL00065 psaC photosystem I subunit VII.
Probab=95.41 E-value=0.0085 Score=38.34 Aligned_cols=54 Identities=20% Similarity=0.383 Sum_probs=43.1
Q ss_pred CHHHCCCCCEEEEEEECCCCEE----EEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 8132135860068896599705----66515666704757300688886253679888
Q gi|254781024|r 494 GPSMRYCPAGVYEWHQNNDENN----YIIHAQNCIHCKACVIKDPNQNIEWNPPQGGD 547 (554)
Q Consensus 494 ~p~~~~cpa~vye~~~~~~~~~----~~i~~~nc~hcktc~ik~p~~~i~w~~p~gg~ 547 (554)
T Consensus 15 ~~Cvr~CP~dviemvp~dg~k~~q~~~~~R~EdCiGC~~Ce~aCPtdalS~r~~~g~e 72 (81)
T CHL00065 15 TQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGHE 72 (81)
T ss_pred HHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCH
T ss_conf 7898868830100123445554533566761327666535355899861689961731