HHsearch alignment for GI: 254781024 and conserved domain: COG0446
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].
Probab=94.39 E-value=0.071 Score=31.90 Aligned_cols=101 Identities=24% Similarity=0.376 Sum_probs=70.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEC
Q ss_conf 47799989768999999999808997399997867789864027403336788867872641488543224366999977
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFLN 94 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l~ 94 (554)
T Consensus 137 ~~v~vvG~G~~gle~A~~~~~~G--~~v~l~e~~~~~~~~~-----~--------------------------------- 176 (415)
T COG0446 137 KDVVVVGAGPIGLEAAEAAAKRG--KKVTLIEAADRLGGQL-----L--------------------------------- 176 (415)
T ss_pred CEEEEECCHHHHHHHHHHHHHCC--CEEEEEECCCCCCCCC-----C---------------------------------
T ss_conf 73999893499999999998779--9389997566423311-----2---------------------------------
Q ss_pred CCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEE-EEECCCCCCCCCCCCC
Q ss_conf 997677365435654467882688888989999999987495330682243477627762014-5412432443466578
Q gi|254781024|r 95 AQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALG-ILTGEKGKNYDGTQGK 173 (554)
Q Consensus 95 ~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvg-v~t~~~G~~k~~~~~~ 173 (554)
T Consensus 177 ------------------------~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~~~~~------------- 218 (415)
T COG0446 177 ------------------------D-PEVAEELAELLEKYGVELLLGTKVVGVEGKGNTLVVERVVG------------- 218 (415)
T ss_pred ------------------------C-HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCEEEEEEEE-------------
T ss_conf ------------------------1-88999999999972948982652699992586215544566-------------
Q ss_pred CCCCEEEEEEEEEEEECCCCCH
Q ss_conf 7563026774257860664432
Q gi|254781024|r 174 HYIAPMLLLSKYMLVGEGACGS 195 (554)
Q Consensus 174 ~~~~g~~i~Ak~vI~AdG~~s~ 195 (554)
T Consensus 219 --~~~~~~~~d~~~~~~g~~p~ 238 (415)
T COG0446 219 --IDGEEIKADLVIIGPGERPN 238 (415)
T ss_pred --EEEEEECCCEEEECCCCCCC
T ss_conf --53035223369878975776