HHsearch alignment for GI: 254781024 and conserved domain: COG0644
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion].
Probab=100.00 E-value=0 Score=520.13 Aligned_cols=394 Identities=34% Similarity=0.522 Sum_probs=341.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEE
Q ss_conf 03647799989768999999999808997399997867789864027403336788867872641488543224366999
Q gi|254781024|r 12 VFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYW 91 (554)
Q Consensus 12 ~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~ 91 (554)
T Consensus 1 ~~~~DVvIVGaGPAGs~aA~~la~~G--~~VlvlEk~~~~G~k~~~~~~~~~~~l~~l~~~~~~~----i~~~v~~~~~~ 74 (396)
T COG0644 1 MMEYDVVIVGAGPAGSSAARRLAKAG--LDVLVLEKGSEPGAKPCCGGGLSPRALEELIPDFDEE----IERKVTGARIY 74 (396)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHH----HEEEEEEEEEE
T ss_conf 94788999897889999999998579--9299996578899987676667877887745552133----21332026997
Q ss_pred EECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 97799767736543565446788268888898999999998749533068224347762776201454124324434665
Q gi|254781024|r 92 FLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQ 171 (554)
Q Consensus 92 ~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~ 171 (554)
T Consensus 75 ~~~~~~~~~~~~---------~~~y~v~R~~fd~~La~~A~~aGae~~~~~~~~~~~~~~~~~~~~~~~~~--------- 136 (396)
T COG0644 75 FPGEKVAIEVPV---------GEGYIVDRAKFDKWLAERAEEAGAELYPGTRVTGVIREDDGVVVGVRAGD--------- 136 (396)
T ss_pred CCCCEEEEECCC---------CCEEEEEHHHHHHHHHHHHHHHCCEEEECCEEEEEEEECCCEEEEEECCC---------
T ss_conf 157426874488---------85799888998899999999839899818788999981781699995686---------
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 78756302677425786066443255421122489988889899889888875165667888089950434768766412
Q gi|254781024|r 172 GKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKIKPQYHRRGLALHSIGWPLDMNTSGGG 251 (554)
Q Consensus 172 ~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei~~~~~~~G~~~h~~g~~~~~~~~ggg 251 (554)
T Consensus 137 -------~e~~ak~vI~AdG~~~~l~~~lg~~-----~~~~~~~~~~~~e~~~~~----~~~~~~~~~~~~~~~~~~Gy~ 200 (396)
T COG0644 137 -------DEVRAKVVIDADGVNSALARKLGLK-----DRKPEDYAIGVKEVIEVP----DDGDVEEFLYGPLDVGPGGYG 200 (396)
T ss_pred -------EEEECCEEEECCCCCHHHHHHHCCC-----CCCCCEEEEEEEEEEECC----CCCCEEEEEEECCCCCCCCEE
T ss_conf -------6996189998848576889872887-----778743689999998279----887505899833666788579
Q ss_pred EEEECCCCEEEEEEEECCCCCCCCCCHH-HHHHHHHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 5766479805999983266656688988-999998608004565038826303513400542124874230887996123
Q gi|254781024|r 252 FVYHFDDNLVSIGFVLHLDYRNPWISAY-EELQRFKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLSFPGGSLIGCA 330 (554)
Q Consensus 252 wiy~~~d~~~~iG~v~~ld~~~~~~~~~-~~lq~fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~~~g~lLvGDA 330 (554)
T Consensus 201 wifP~~~~~~~VG~~~~~~~--~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ip~~g~~~~~-~~~~~~~lvGDA 277 (396)
T COG0644 201 WIFPLGDGHANVGIGVLLDD--PSLSPFLELLERFKEHPAIRKLLLGGKILEYAAGGIPEGGPASRP-LVGDGVLLVGDA 277 (396)
T ss_pred EEEECCCCEEEEEEEEECCC--CCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEEEEEEECCCCCCCC-EECCCEEEEECC
T ss_conf 99988997599999996477--664336999999861644300025761775300054137755562-052898999846
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 23313664352268999999999999998745886530367899864204667888742256688761604689998999
Q gi|254781024|r 331 AGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKHDDPIEIEDSWRQTQIGKDLWIIRNIKPLLSRFGVFIGLSLGLMD 410 (554)
Q Consensus 331 AG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~~~l~~Ye~~~~~s~~~~el~~~rn~~~~~~~~g~~~g~~~~~~~ 410 (554)
T Consensus 278 Ag~v~p~~g~Gi~~A~~sg~~Aae~i~~~~~~~--~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 352 (396)
T COG0644 278 AGFVNPLTGEGIRYAIKSGKLAAEAIAEALEGG--EEALAEYERLLRKSLAREDLKSLRLLKLLLR---LLDRTLPALIK 352 (396)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_conf 667488655773999999999999998642224--4679999999988888999987887998876---32556899999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCC-CCCCCCHHCCCCCC
Q ss_conf 98854226566665677888965400056437444878877642-11232111037889
Q gi|254781024|r 411 IWIQKILGFSFLGTLKHHKMDSCSLEAASQHKKIDYPKPDGKLT-FDIMSSLFLAKVKY 468 (554)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~kpdg~~~-fd~~~~v~~s~~~h 468 (554)
T Consensus 353 ~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 396 (396)
T COG0644 353 LL----AD-----------KDLLGLIKKYLRKLILYPLLKGVLARFDLLKSVKRSLTAL 396 (396)
T ss_pred HH----HH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87----42-----------2144444444333445554531144899998876665059