HHsearch alignment for GI: 254781024 and conserved domain: COG1252
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].
Probab=97.26 E-value=0.0053 Score=39.75 Aligned_cols=56 Identities=21% Similarity=0.167 Sum_probs=39.4
Q ss_pred CCEECCCCCCCCCCCCCCCCEEEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 513400542124874230887996123233136-64352268999999999999998745
Q gi|254781024|r 304 GARVISEGGWQSVPKLSFPGGSLIGCAAGFVNL-LRIKGSHNAIISGMLAAEKIVERLSN 362 (554)
Q Consensus 304 ga~~ip~gg~~s~pk~~~~g~lLvGDAAG~vnP-~~g~GI~~Am~SG~lAAEai~eal~~ 362 (554)
T Consensus 277 ~Grl~V~~~L~---~~~~~~IFa~GD~A~~~~~~p~P~tAQ~A~Qqg~~~a~ni~~~l~g 333 (405)
T COG1252 277 RGRLVVNPTLQ---VPGHPDIFAAGDCAAVIDPRPVPPTAQAAHQQGEYAAKNIKARLKG 333 (405)
T ss_pred CCCEEECCCCC---CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89777578751---6998986997111037688879981188999999999999999649