HHsearch alignment for GI: 254781024 and conserved domain: COG1252

>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].
Probab=97.26  E-value=0.0053  Score=39.75  Aligned_cols=56  Identities=21%  Similarity=0.167  Sum_probs=39.4

Q ss_pred             CCEECCCCCCCCCCCCCCCCEEEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             513400542124874230887996123233136-64352268999999999999998745
Q gi|254781024|r  304 GARVISEGGWQSVPKLSFPGGSLIGCAAGFVNL-LRIKGSHNAIISGMLAAEKIVERLSN  362 (554)
Q Consensus       304 ga~~ip~gg~~s~pk~~~~g~lLvGDAAG~vnP-~~g~GI~~Am~SG~lAAEai~eal~~  362 (554)
T Consensus       277 ~Grl~V~~~L~---~~~~~~IFa~GD~A~~~~~~p~P~tAQ~A~Qqg~~~a~ni~~~l~g  333 (405)
T COG1252         277 RGRLVVNPTLQ---VPGHPDIFAAGDCAAVIDPRPVPPTAQAAHQQGEYAAKNIKARLKG  333 (405)
T ss_pred             CCCEEECCCCC---CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             89777578751---6998986997111037688879981188999999999999999649