HHsearch alignment for GI: 254781024 and conserved domain: KOG2960

Probab=98.58  E-value=2.4e-07  Score=69.95  Aligned_cols=154  Identities=23%  Similarity=0.369  Sum_probs=90.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC-CCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEE
Q ss_conf             647799989768999999999808997399997867789864-0274033367888678726414885432243669999
Q gi|254781024|r   14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHI-LSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWF   92 (554)
Q Consensus        14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i-~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~   92 (554)
T Consensus        76 esDvviVGAGSaGLsAAY~I~~~rPdlkvaIIE~SVaPGGGaWLGGQLFSAMvvRK-----------P--------AhLF  136 (328)
T KOG2960          76 ESDVVIVGAGSAGLSAAYVIAKNRPDLKVAIIESSVAPGGGAWLGGQLFSAMVVRK-----------P--------AHLF  136 (328)
T ss_pred             CCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCC-----------H--------HHHH
T ss_conf             04569987786654146663036998469999700369974340101545654247-----------2--------8888


Q ss_pred             ECCCCCEECCCCCCCCCCCCCCCEEEEH--HHHHH-HHHHHHHHCCCEECCCCEEEEEEECCCC----CEEEEEECCCCC
Q ss_conf             7799767736543565446788268888--89899-9999998749533068224347762776----201454124324
Q gi|254781024|r   93 LNAQRSIQIPHFCLPDFMDNKEHYIVSL--GQVCR-WLKNKAEALGVEIYCGFTATEIYYGKKG----EALGILTGEKGK  165 (554)
Q Consensus        93 l~~~~~~~~p~~~~p~~~~~~g~yiv~r--~~fd~-~L~~~Ae~~Gvei~~g~~v~~i~~~e~g----~vvgv~t~~~G~  165 (554)
T Consensus       137 L~E---igvpY-------edegdYVVVKHAALFtSTvmsk~LalPNVKLFNAtavEDLivk~g~~g~~rvaGVVTNWtLV  206 (328)
T KOG2960         137 LQE---IGVPY-------EDEGDYVVVKHAALFTSTVMSKVLALPNVKLFNATAVEDLIVKPGEKGEVRVAGVVTNWTLV  206 (328)
T ss_pred             HHH---HCCCC-------CCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCEEEEEEEEEEEEE
T ss_conf             887---38973-------46787799950788999999998627860000101135550036867736887897401776


Q ss_pred             CCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf             43466578756302677425786066443255
Q gi|254781024|r  166 NYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT  197 (554)
Q Consensus       166 ~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la  197 (554)
T Consensus       207 ~-qnHgtQsCMDPNviea~~vvS~tGHDGPFG  237 (328)
T KOG2960         207 T-QNHGTQSCMDPNVIEAAVVVSTTGHDGPFG  237 (328)
T ss_pred             E-ECCCCCCCCCCCEEEEEEEEECCCCCCCCH
T ss_conf             5-035863237977056799997157888822