HHsearch alignment for GI: 254781024 and conserved domain: PRK04176
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional.
Probab=99.77 E-value=1.1e-17 Score=141.93 Aligned_cols=160 Identities=21% Similarity=0.333 Sum_probs=121.7
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHH-HHHHCCCHHHHCCCCCCCEEEEEE
Q ss_conf 1036477999897689999999998089973999978677898640274033367-888678726414885432243669
Q gi|254781024|r 11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIG-IDSLLPRWREDKGHPFHTVVKRDL 89 (554)
Q Consensus 11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~a-L~eL~Pd~~e~~g~pl~~~v~~d~ 89 (554)
T Consensus 22 ~~~e~DVvIVGaGpsGLtAAy~LAk~g--~Kv~i~E~~ls~GGG~WgGGmlf~~iVv~~-----------~a~------- 81 (257)
T PRK04176 22 DYLEVDVAIVGAGPSGLTAAYYLAKAG--LKVAVFERKLSFGGGIWGGGMLFNKIVVQE-----------EAD------- 81 (257)
T ss_pred HHHHCCEEEECCCCHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCHHHHCCHHHHCC-----------HHH-------
T ss_conf 764068899888827999999998689--659999713468886313000133454005-----------379-------
Q ss_pred EEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf 99977997677365435654467882688888989999999987495330682243477627762014541243244346
Q gi|254781024|r 90 YWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDG 169 (554)
Q Consensus 90 ~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~ 169 (554)
T Consensus 82 -~iLde---~gi~y-----~~~~~g~~v~d~~~~~s~L~~~a~~aGakifn~~~VEDli~r~~~rV~GvV~NWt~V~~~g 152 (257)
T PRK04176 82 -EILDE---FGIRY-----KEVEDGLYVADSVEAAAKLAAGAIDAGAKIFNGVSVEDVIIREDGRVAGVVINWTPVEMAG 152 (257)
T ss_pred -HHHHH---CCCCC-----EECCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCEEEEEECCHHHHHHC
T ss_conf -99998---49973-----3358963995089999999999974798898230442156612881789996257756403
Q ss_pred CCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 6578756302677425786066443255421122
Q gi|254781024|r 170 TQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIER 203 (554)
Q Consensus 170 ~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~ 203 (554)
T Consensus 153 lh----vDP~~i~ak~VvdaTGHda~v~~~~~kr 182 (257)
T PRK04176 153 LH----VDPLTIEAKAVVDATGHDAEVVSVLARK 182 (257)
T ss_pred CC----CCCCEECCCEEEECCCCCHHHHHHHHHH
T ss_conf 55----5852011368998889860899999985