HHsearch alignment for GI: 254781024 and conserved domain: PRK06263

>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.71  E-value=7.2e-14  Score=115.30  Aligned_cols=167  Identities=20%  Similarity=0.203  Sum_probs=99.4

Q ss_pred             CCHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC---CC---CEECHH-H----HHHHC------
Q ss_conf             2001036477999897689999999998089973999978677898640---27---403336-7----88867------
Q gi|254781024|r    8 HNKDVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL---SG---AIIDPI-G----IDSLL------   70 (554)
Q Consensus         8 ~~re~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~---sG---~vl~p~-a----L~eL~------   70 (554)
T Consensus         1 ~~~~~i~TDVlVIGsG~AGl~AA~~a~~~g---~vvlv~k~~~~~sG~s~~a~gg~~a~~~~~Ds~e~~~~Dt~~~g~~l   77 (539)
T PRK06263          1 MEDETMITDVLIIGSGGAGARAAIEASQKG---TVVIVSKGLFGKSGCTVMAEGGYNAVLNPEDSFEKHFEDTMKGGAYL   77 (539)
T ss_pred             CCCCEEECCEEEECCHHHHHHHHHHHHHCC---CEEEEECCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf             986189649899995399999999998259---97999778989998478886677150899999999999999852688


Q ss_pred             --C--------------CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC
Q ss_conf             --8--------------726414885432243669999779976773654356544678826888889899999999874
Q gi|254781024|r   71 --P--------------RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEAL  134 (554)
Q Consensus        71 --P--------------d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~  134 (554)
T Consensus        78 ~d~~lv~~l~~~a~~~v~~L~~~G~~f~~~--~~g~~~~~~~gg~s~-----~R~~~~-~~--~tG~~i~~~L~~~~~~~  147 (539)
T PRK06263         78 NDPKLVEILVKEAPKRLKDLEKFGAVFDRT--EDGEIAQRPFGGQSF-----NRTCYA-GD--RTGHEMMMGLMEYLIKE  147 (539)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEECCCCCC-----CCCCCC-CC--CCCHHHHHHHHHHHHHC
T ss_conf             889999999999999999999839985127--998673100478544-----432235-77--66199999999998616


Q ss_pred             CCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf             953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r  135 GVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT  197 (554)
Q Consensus       135 Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la  197 (554)
T Consensus       148 gv~i~~~~~~~~Ll~~~~g~v~Ga~~~~~~---~-------g~~~~i~AkaVILATGG~~~ly  200 (539)
T PRK06263        148 RIKILEEVMAIKLLVDELGKVFGAVFLDLR---N-------GDIVPIYAKSTILATGGAGQLY  200 (539)
T ss_pred             CCEEEEEEEEEEEEECCCCEEEEEEEEECC---C-------CEEEEEEECEEEECCCCCCCCC
T ss_conf             977995159999998179969999999778---9-------8299996056998989876568