HHsearch alignment for GI: 254781024 and conserved domain: PRK06263
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.71 E-value=7.2e-14 Score=115.30 Aligned_cols=167 Identities=20% Similarity=0.203 Sum_probs=99.4
Q ss_pred CCHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC---CC---CEECHH-H----HHHHC------
Q ss_conf 2001036477999897689999999998089973999978677898640---27---403336-7----88867------
Q gi|254781024|r 8 HNKDVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL---SG---AIIDPI-G----IDSLL------ 70 (554)
Q Consensus 8 ~~re~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~---sG---~vl~p~-a----L~eL~------ 70 (554)
T Consensus 1 ~~~~~i~TDVlVIGsG~AGl~AA~~a~~~g---~vvlv~k~~~~~sG~s~~a~gg~~a~~~~~Ds~e~~~~Dt~~~g~~l 77 (539)
T PRK06263 1 MEDETMITDVLIIGSGGAGARAAIEASQKG---TVVIVSKGLFGKSGCTVMAEGGYNAVLNPEDSFEKHFEDTMKGGAYL 77 (539)
T ss_pred CCCCEEECCEEEECCHHHHHHHHHHHHHCC---CEEEEECCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 986189649899995399999999998259---97999778989998478886677150899999999999999852688
Q ss_pred --C--------------CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC
Q ss_conf --8--------------726414885432243669999779976773654356544678826888889899999999874
Q gi|254781024|r 71 --P--------------RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEAL 134 (554)
Q Consensus 71 --P--------------d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~ 134 (554)
T Consensus 78 ~d~~lv~~l~~~a~~~v~~L~~~G~~f~~~--~~g~~~~~~~gg~s~-----~R~~~~-~~--~tG~~i~~~L~~~~~~~ 147 (539)
T PRK06263 78 NDPKLVEILVKEAPKRLKDLEKFGAVFDRT--EDGEIAQRPFGGQSF-----NRTCYA-GD--RTGHEMMMGLMEYLIKE 147 (539)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEECCCCCC-----CCCCCC-CC--CCCHHHHHHHHHHHHHC
T ss_conf 889999999999999999999839985127--998673100478544-----432235-77--66199999999998616
Q ss_pred CCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 135 GVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 135 Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 148 gv~i~~~~~~~~Ll~~~~g~v~Ga~~~~~~---~-------g~~~~i~AkaVILATGG~~~ly 200 (539)
T PRK06263 148 RIKILEEVMAIKLLVDELGKVFGAVFLDLR---N-------GDIVPIYAKSTILATGGAGQLY 200 (539)
T ss_pred CCEEEEEEEEEEEEECCCCEEEEEEEEECC---C-------CEEEEEEECEEEECCCCCCCCC
T ss_conf 977995159999998179969999999778---9-------8299996056998989876568