HHsearch alignment for GI: 254781024 and conserved domain: PRK06452
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.74 E-value=1.6e-14 Score=119.76 Aligned_cols=162 Identities=24% Similarity=0.338 Sum_probs=98.2
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCE---E----CH------------------
Q ss_conf 1036477999897689999999998089973999978677898640--2740---3----33------------------
Q gi|254781024|r 11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGAI---I----DP------------------ 63 (554)
Q Consensus 11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~v---l----~p------------------ 63 (554)
T Consensus 2 ~~~~~DVlVIG~G~AGl~AAi~a~~~G--~~V~lv~K~~~~~s~s~~a~ggi~a~~~~~~~~~Ds~~~~~~Dt~~~G~~l 79 (566)
T PRK06452 2 EKLSYDAVIIGAGLAGLMAAHEIASAG--YSVAVISKVFPTRSHSAAAEGGIAAYIPGNSDPNDNPDYMTYDTIKGGDYL 79 (566)
T ss_pred CEEECCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 668707899997499999999998779--978999788999975368668206863579999989999999999854688
Q ss_pred ---HHHHHHC---C---CHHHHCCCCCCCEEEEEEEEEECCCCCEECC---CCCCCCCCCCCCCEEEEHHHHHHHHHHHH
Q ss_conf ---6788867---8---7264148854322436699997799767736---54356544678826888889899999999
Q gi|254781024|r 64 ---IGIDSLL---P---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIP---HFCLPDFMDNKEHYIVSLGQVCRWLKNKA 131 (554)
Q Consensus 64 ---~aL~eL~---P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p---~~~~p~~~~~~g~yiv~r~~fd~~L~~~A 131 (554)
T Consensus 80 ~d~~~v~~l~~~~~~~i~~L~~~Gv~f~r~----------~dG~~~~~~~gghs~~R~~~~~d---~tG~~i~~~l~~~~ 146 (566)
T PRK06452 80 VDQDAAELLSYKSGEIVELLERWGALFNRQ----------PDGRVALRYFGGQTYPRTRFVGD---KTGMALLHTLYERT 146 (566)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCC----------CCCCEEEEECCCCCCCEEEECCC---CCCHHHHHHHHHHH
T ss_conf 899999999998999999999839986528----------99988443347755133574288---76689999999998
Q ss_pred HHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHH
Q ss_conf 8749533068224347762776201454124324434665787563026774257860664432554
Q gi|254781024|r 132 EALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTR 198 (554)
Q Consensus 132 e~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak 198 (554)
T Consensus 147 ~~~~i~~~~~~~~~~Ll~~-~~~v~Gav~~d~~~----------~~~~~~~AkaVVLATGG~g~ly~ 202 (566)
T PRK06452 147 SGLNVDFYNEWFAWDLVRD-EKRVAGVVAMDMRS----------MEPFFFKAKAVVIASGGMGMLYR 202 (566)
T ss_pred HCCCCEEEEEEEEEEEEEC-CCEEEEEEEEECCC----------CEEEEEECCEEEEECCCCCEEEC
T ss_conf 6299789987899998853-98688999997689----------95999981889991785134432