HHsearch alignment for GI: 254781024 and conserved domain: PRK07057
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.65 E-value=5.3e-13 Score=109.24 Aligned_cols=179 Identities=21% Similarity=0.270 Sum_probs=107.0
Q ss_pred CCHHHCCCCHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCE---EC-------------
Q ss_conf 96010242001036477999897689999999998089973999978677898640--2740---33-------------
Q gi|254781024|r 1 MNSCDILHNKDVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGAI---ID------------- 62 (554)
Q Consensus 1 ~~~~~~~~~re~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~v---l~------------- 62 (554)
T Consensus 1 ~~~~~~~~~~~--~~DVlVIGsG~AGl~AA~~a~~~G--~~V~li~K~~~~~s~s~~A~GGi~a~~~~~~~Ds~~~h~~D 76 (591)
T PRK07057 1 MAAIKTSLPRR--KFDVVIVGAGGSGMRASLQLARAG--LSVAVLSKVFPTRSHTVAAQGGIGASLGNMSEDNWHFHFYD 76 (591)
T ss_pred CCCCCCCCCCC--CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHH
T ss_conf 98767888744--778899996699999999998769--95899978899997478874235252589999998999999
Q ss_pred ----------HHHHHHHC---C---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEE--HHHHH
Q ss_conf ----------36788867---8---726414885432243669999779976773654356544678826888--88989
Q gi|254781024|r 63 ----------PIGIDSLL---P---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVS--LGQVC 124 (554)
Q Consensus 63 ----------p~aL~eL~---P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~--r~~fd 124 (554)
T Consensus 77 Tl~~g~~l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~r~--~dg~~~~r~~gGhs~~~g~~~~---~r~~~~~d~tG~~i~ 151 (591)
T PRK07057 77 TIKGSDWLGDQDAIEFMCREAPNVVYELEHFGMPFDRN--ADGTIYQRPFGGHTANYGEKPV---QRACAAADRTGHALL 151 (591)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEECCCCCCCCCCCCCCC---CEEEECCCCCCHHHH
T ss_conf 99861677789999999998999999999869941017--9987821356771044567864---245531677549999
Q ss_pred HHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHH
Q ss_conf 99999998749533068224347762776201454124324434665787563026774257860664432554
Q gi|254781024|r 125 RWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTR 198 (554)
Q Consensus 125 ~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak 198 (554)
T Consensus 152 ~~l~~~~~~~~v~~~~~~~~~~ll~~~~G~v~Ga~~~~~~---~-------g~~~~~~AkaVIlATGG~g~ly~ 215 (591)
T PRK07057 152 HTLYQQNVAAKTQFFVEWMALDLIRDADGDVLGVTALEME---T-------GDVYILEAKTTLFATGGAGRIFA 215 (591)
T ss_pred HHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEEEEECC---C-------CCEEEEEEEEEEECCCCCCCCCC
T ss_conf 9999999852988999778999987479969999999757---9-------90999983369987888766666