HHsearch alignment for GI: 254781024 and conserved domain: PRK08244
>PRK08244 hypothetical protein; Provisional.
Probab=99.94 E-value=1.3e-24 Score=189.92 Aligned_cols=325 Identities=17% Similarity=0.143 Sum_probs=182.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHH--CCCHHHH--CCCCCCCEEEEE
Q ss_conf 364779998976899999999980899739999786778986402740333678886--7872641--488543224366
Q gi|254781024|r 13 FEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSL--LPRWRED--KGHPFHTVVKRD 88 (554)
Q Consensus 13 meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL--~Pd~~e~--~g~pl~~~v~~d 88 (554)
T Consensus 1 m~tDVlIVGaGPvGL~lAl~La~~G--v~v~vvEr~~~~~~~-~RA~~l~~rt~eil~~~Gl~~~l~~~g~~----~~~~ 73 (494)
T PRK08244 1 MKTDVIIIGGGPVGLMLASELALAG--VRTCVIERLKEPVPY-SKALTLHPRTLELLEMRGLLERFLEKGRK----LPSG 73 (494)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCC-CCEEECCHHHHHHHHHCCCHHHHHHHCEE----CCCC
T ss_conf 9989999994789999999999779--999999089998889-98746089999999987898898852107----6563
Q ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCC
Q ss_conf 99997799767736543565446788268888898999999998749533068224347762776201454124324434
Q gi|254781024|r 89 LYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYD 168 (554)
Q Consensus 89 ~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~ 168 (554)
T Consensus 74 ~~~--~~~~~~~~~~~~~----~~~~~~~~~Q~~le~iL~~~a~~~g~~v~~g~e~~~~~~~~d~V~~~~~~~~-g---- 142 (494)
T PRK08244 74 HFA--GLDTRLDFSALDT----RANYTLFLPQAETEKILEEHARSLGVEILRGHEALAVRQDGDGVEVVVRGPD-G---- 142 (494)
T ss_pred EEE--CCCCCEECCCCCC----CCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEEEECC-C----
T ss_conf 681--4433032033577----8882698155999999999998479889968689999986997899999089-7----
Q ss_pred CCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 66578756302677425786066443255421122489988889899889888875165667888089950434768766
Q gi|254781024|r 169 GTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKIKPQYHRRGLALHSIGWPLDMNTS 248 (554)
Q Consensus 169 ~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei~~~~~~~G~~~h~~g~~~~~~~~ 248 (554)
T Consensus 143 ---------~~~i~a~ylVGaDGa~S~VR~~lgI~~~g~~~--~~~~~-----~~d~~~~~~~~~~~~~~---~---~~~ 200 (494)
T PRK08244 143 ---------LRTLTSLYAVGADGAGSTVRKQAGIAFSGTDA--TLTAM-----LGDVALEDPPPSSFYSC---C---TRE 200 (494)
T ss_pred ---------CEEEEEEEEEEECCCCCHHHHHCCCCCCCCCC--EEEEE-----EEEEEECCCCCCEEEEE---E---CCC
T ss_conf ---------68998779998246672679875998546411--37999-----99999637998769998---5---599
Q ss_pred CCEEEEECCCCEEEEEEEECCCCCCCCCCH--HHHHHH-HHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEE
Q ss_conf 412576647980599998326665668898--899999-86080045650388263035134005421248742308879
Q gi|254781024|r 249 GGGFVYHFDDNLVSIGFVLHLDYRNPWISA--YEELQR-FKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLSFPGGS 325 (554)
Q Consensus 249 gggwiy~~~d~~~~iG~v~~ld~~~~~~~~--~~~lq~-fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~~~g~l 325 (554)
T Consensus 201 g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~--g~~~~~~~~~~-~s~-~~~~~-r~A~~~r~gRVf 275 (494)
T PRK08244 201 GGVVIVPLDGGIFRVLIIDPHRPQAPKDEPVTLEELKKSLSRIC--GTDFGLNDPVW-MSR-FGNAT-RQAERYRSGRIF 275 (494)
T ss_pred CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH--CCCCCCCCEEE-EEE-CCCCC-EEECCCCCCCEE
T ss_conf 70999980899799999827655654447889899999999863--88776033248-986-15300-450324479689
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 96123233136643522689999999999999987458865303678998642046678
Q gi|254781024|r 326 LIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKHDDPIEIEDSWRQTQIGKD 384 (554)
Q Consensus 326 LvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~~~l~~Ye~~~~~s~~~~e 384 (554)
T Consensus 276 LaGDAAH~~~P~gGqGmNtGi~DA~NLaWKLA~vl~G~a~~~LLdTY~~ERrp--va~~ 332 (494)
T PRK08244 276 LAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGWAPPWLLDSYHHERHP--VGKA 332 (494)
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHCHH--HHHH
T ss_conf 96040100388766651343032454899999997688980232362554412--8999