HHsearch alignment for GI: 254781024 and conserved domain: PRK08348

Probab=96.85  E-value=0.00092  Score=45.03  Aligned_cols=56  Identities=20%  Similarity=0.434  Sum_probs=45.0

Q ss_pred             CCCCCHHCCHHHHCCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf             7554400173541781321358600688965997056651566670475730068888625367
Q gi|254781024|r  480 DKDLQKKSELRIYSGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEWNPP  543 (554)
Q Consensus       480 ~~~~~~~~~~~~~~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~p  543 (554)
T Consensus        40 d~dkCig------C~~C~~~CP~~aI~~~--~~~~~~~i~~~~Ci~Cg~C~~~CP~~AI~~t~~   95 (111)
T PRK08348         40 NVDKCVG------CRMCVTVCPAGVFVYL--PEIRKVALWTGRCVFCGQCVDVCPTGALQMSDD   95 (111)
T ss_pred             CCCCCCC------CCHHHHHCCCCCCEEC--CCCCEEEECCCCCCCCCCCCCCCCCCCEECCCE
T ss_conf             8552828------0728775932206752--776667877790853887577377283687680