HHsearch alignment for GI: 254781024 and conserved domain: PRK08626
>PRK08626 fumarate reductase flavoprotein subunit; Provisional.
Probab=99.72 E-value=3.1e-14 Score=117.81 Aligned_cols=174 Identities=20% Similarity=0.208 Sum_probs=101.6
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCE---E---------CH--HHHHHH-----
Q ss_conf 1036477999897689999999998089973999978677898640--2740---3---------33--678886-----
Q gi|254781024|r 11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGAI---I---------DP--IGIDSL----- 69 (554)
Q Consensus 11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~v---l---------~p--~aL~eL----- 69 (554)
T Consensus 2 ~~i~tDVLVIG~G~AGL~AAl~a~e~G--~~V~vl~K~~~~~snS~~AqGGi~aalg~~~~~~~Ds~e~h~~DTlkgg~~ 79 (657)
T PRK08626 2 KIIYTDSLVIGAGLAGLRVAIAAKERG--LDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKGEGDNEDVHFADTVKGSDW 79 (657)
T ss_pred CEEECCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 737516899996599999999999759--957999688899986477533776630346789997989999999986168
Q ss_pred -------------CC---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCC---CCCCCCCEEEEH---------H
Q ss_conf -------------78---7264148854322436699997799767736543565---446788268888---------8
Q gi|254781024|r 70 -------------LP---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPD---FMDNKEHYIVSL---------G 121 (554)
Q Consensus 70 -------------~P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~---~~~~~g~yiv~r---------~ 121 (554)
T Consensus 80 ~~d~~~v~~l~~~ap~~i~~L~~~Gvpf~r~~~G~~~~~~~-~~~~~~~~~~~~~g~i~~r~fGG~s~~R~~~~~d~tG~ 158 (657)
T PRK08626 80 GCDQEVARMFAHTAPKAVRELANWGVPWTRVTAGPRTVVVN-AQKVTIEEAEEAHGLINARDFGGTKKWRTCYTADGTGH 158 (657)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHH
T ss_conf 88899999999989999999997599842266776321135-43222100001456211002588201124523888779
Q ss_pred HHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHH
Q ss_conf 98999999998749533068224347762776201454124324434665787563026774257860664432554
Q gi|254781024|r 122 QVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTR 198 (554)
Q Consensus 122 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak 198 (554)
T Consensus 159 ~i~~~L~~~~~~~gV~i~~~~~~~~Li~-d~g~~~Gav~~d~~---~G-------~~~~~~AkaVILATGG~g~ly~ 224 (657)
T PRK08626 159 TLLYAVDNEAISLGVPVHDRKEALALIH-DGKRCHGAVARCLI---TG-------ELRAYVAKGTLIATGGYGRIYK 224 (657)
T ss_pred HHHHHHHHHHHHCCCEEECCEEEEEEEE-ECCEEEEEEEEECC---CC-------CEEEEEECCEEEECCCCCCEEE
T ss_conf 9999999999975994990629999999-89999999999657---89-------6889863418993266662355