HHsearch alignment for GI: 254781024 and conserved domain: PRK08626

>PRK08626 fumarate reductase flavoprotein subunit; Provisional.
Probab=99.72  E-value=3.1e-14  Score=117.81  Aligned_cols=174  Identities=20%  Similarity=0.208  Sum_probs=101.6

Q ss_pred             HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCE---E---------CH--HHHHHH-----
Q ss_conf             1036477999897689999999998089973999978677898640--2740---3---------33--678886-----
Q gi|254781024|r   11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGAI---I---------DP--IGIDSL-----   69 (554)
Q Consensus        11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~v---l---------~p--~aL~eL-----   69 (554)
T Consensus         2 ~~i~tDVLVIG~G~AGL~AAl~a~e~G--~~V~vl~K~~~~~snS~~AqGGi~aalg~~~~~~~Ds~e~h~~DTlkgg~~   79 (657)
T PRK08626          2 KIIYTDSLVIGAGLAGLRVAIAAKERG--LDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKGEGDNEDVHFADTVKGSDW   79 (657)
T ss_pred             CEEECCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             737516899996599999999999759--957999688899986477533776630346789997989999999986168


Q ss_pred             -------------CC---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCC---CCCCCCCEEEEH---------H
Q ss_conf             -------------78---7264148854322436699997799767736543565---446788268888---------8
Q gi|254781024|r   70 -------------LP---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPD---FMDNKEHYIVSL---------G  121 (554)
Q Consensus        70 -------------~P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~---~~~~~g~yiv~r---------~  121 (554)
T Consensus        80 ~~d~~~v~~l~~~ap~~i~~L~~~Gvpf~r~~~G~~~~~~~-~~~~~~~~~~~~~g~i~~r~fGG~s~~R~~~~~d~tG~  158 (657)
T PRK08626         80 GCDQEVARMFAHTAPKAVRELANWGVPWTRVTAGPRTVVVN-AQKVTIEEAEEAHGLINARDFGGTKKWRTCYTADGTGH  158 (657)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHH
T ss_conf             88899999999989999999997599842266776321135-43222100001456211002588201124523888779


Q ss_pred             HHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHH
Q ss_conf             98999999998749533068224347762776201454124324434665787563026774257860664432554
Q gi|254781024|r  122 QVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTR  198 (554)
Q Consensus       122 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak  198 (554)
T Consensus       159 ~i~~~L~~~~~~~gV~i~~~~~~~~Li~-d~g~~~Gav~~d~~---~G-------~~~~~~AkaVILATGG~g~ly~  224 (657)
T PRK08626        159 TLLYAVDNEAISLGVPVHDRKEALALIH-DGKRCHGAVARCLI---TG-------ELRAYVAKGTLIATGGYGRIYK  224 (657)
T ss_pred             HHHHHHHHHHHHCCCEEECCEEEEEEEE-ECCEEEEEEEEECC---CC-------CEEEEEECCEEEECCCCCCEEE
T ss_conf             9999999999975994990629999999-89999999999657---89-------6889863418993266662355