HHsearch alignment for GI: 254781024 and conserved domain: PRK08773
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated.
Probab=99.95 E-value=1.5e-24 Score=189.46 Aligned_cols=324 Identities=16% Similarity=0.085 Sum_probs=190.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC----CCCEECHHHHHHH--CCCHHHHCCCCCCCEEEE
Q ss_conf 6477999897689999999998089973999978677898640----2740333678886--787264148854322436
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL----SGAIIDPIGIDSL--LPRWREDKGHPFHTVVKR 87 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~----sG~vl~p~aL~eL--~Pd~~e~~g~pl~~~v~~ 87 (554)
T Consensus 6 ~~DV~IvGaGp~Gl~lA~~L~~~G--~~v~liE~~~~~~~~~~~~~~R~~al~~~s~~~L~~lGl~~~i~~-~~~~p~~~ 82 (392)
T PRK08773 6 RRDAVIVGGGVVGAACALALADAG--LSVALVEGREPPRWQADQPDLRVYAFAADNAALLDRLGVWPAVRA-ARVQPYRR 82 (392)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHH-CCCCCEEE
T ss_conf 998899990699999999998669--978999178987555688873699998899999998798166775-16773135
Q ss_pred EEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCC
Q ss_conf 69999779976773654356544678826888889899999999874953306822434776277620145412432443
Q gi|254781024|r 88 DLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNY 167 (554)
Q Consensus 88 d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k 167 (554)
T Consensus 83 ~~v~d~~~~~~~~~~~~~~---~~~~lg~iv~~~~l~~~L~~~~~~~~v~~~~~~~v~~~~~~~~~v~--v~~~------ 151 (392)
T PRK08773 83 MRVWDAGGGGELGFDADTL---GREQLGWIVENDLLVDRLWAAVHAAGIQLHCPARVVELEQDADGVR--LRLD------ 151 (392)
T ss_pred EEEEECCCCCEEEECHHHC---CCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCEEE--EEEC------
T ss_conf 8998458983475365662---8545653225499999999998608998974868999996698589--9977------
Q ss_pred CCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 46657875630267742578606644325542112248998888989988988887516566788808995043476876
Q gi|254781024|r 168 DGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKIKPQYHRRGLALHSIGWPLDMNT 247 (554)
Q Consensus 168 ~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei~~~~~~~G~~~h~~g~~~~~~~ 247 (554)
T Consensus 152 ---------dg~~i~a~lvVgaDG~~S~vR~~~gi~~~~~~y--~q~~l-----v~~v~~~~~~~~~a~~~f~------~ 209 (392)
T PRK08773 152 ---------DGSRLEAALAIAADGAASTLRELAGLPVSRHDY--AQRGV-----VAFVDTEHPHQATAWQRFL------T 209 (392)
T ss_pred ---------CCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCC--CEEEE-----EEEEEECCCCCCEEEEEEC------C
T ss_conf ---------997999889998378874767741888535886--50699-----9999705777615799961------8
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCCCC--CCCHHHHHHHHHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEE
Q ss_conf 641257664798059999832666566--889889999986080045650388263035134005421248742308879
Q gi|254781024|r 248 SGGGFVYHFDDNLVSIGFVLHLDYRNP--WISAYEELQRFKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLSFPGGS 325 (554)
Q Consensus 248 ~gggwiy~~~d~~~~iG~v~~ld~~~~--~~~~~~~lq~fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~~~g~l 325 (554)
T Consensus 210 ~Gp~a~lP~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~g~~~~~~-~~~~~pl~~-~~a~~~~~~Rv~ 285 (392)
T PRK08773 210 TGPLAFLPFADGRSSIVWTLPDAEAERVLALDDADFSRELTQA--FAARLGEVRVAS-PRTAFPLQR-QLVQQYVSGRVL 285 (392)
T ss_pred CCCEEEEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHH--HHHHCCCEEEEC-CCEECCHHH-HHHHHHCCCCEE
T ss_conf 9967998769997799997783667877549968999999998--620046416740-422221776-553341378689
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CC--CHHHHHHHHH
Q ss_conf 9612323313664352268999999999999998745886-53--0367899864
Q gi|254781024|r 326 LIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKK-HD--DPIEIEDSWR 377 (554)
Q Consensus 326 LvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~-~~--~l~~Ye~~~~ 377 (554)
T Consensus 286 LiGDAAH~~~P~aGQG~Nlgl~Da~~L~~~L~~a~~~~~~~~~~~~L~~Y~~~R~ 340 (392)
T PRK08773 286 TLGDAAHVVHPLAGQGVNLGLRDVAALQQLVREAHARRADWAAPHRLQRWARTRR 340 (392)
T ss_pred EEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 9610442779641553405599999999999999853998556999999999999