HHsearch alignment for GI: 254781024 and conserved domain: PRK08849
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=99.92 E-value=7.1e-23 Score=177.85 Aligned_cols=317 Identities=15% Similarity=0.149 Sum_probs=173.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC-CCCCCC----CCCCEECHHHHHHH--CCCHHHHC---CCCCCC
Q ss_conf 647799989768999999999808997399997867-789864----02740333678886--78726414---885432
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSA-EVGAHI----LSGAIIDPIGIDSL--LPRWREDK---GHPFHT 83 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~-~pG~~i----~sG~vl~p~aL~eL--~Pd~~e~~---g~pl~~ 83 (554)
T Consensus 3 ~~DV~IvGaG~vGl~lAl~La~~G--~~V~iiE~~~p~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~i~~~~~~~~~- 79 (384)
T PRK08849 3 KYDIAVVGGGMVGAATAIGFAKQG--RSVAVIEGFEPKAFEASQPMDIRVSAISQNSVDLLESLGAWSSIVAMRVCPYK- 79 (384)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCCC-
T ss_conf 189999992499999999999579--95999968998766666787705678679999999987986468761478600-
Q ss_pred EEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH-CCCEECCCCEEEEEEECCCCCEEEEEECC
Q ss_conf 24366999977997677365435654467882688888989999999987-49533068224347762776201454124
Q gi|254781024|r 84 VVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEA-LGVEIYCGFTATEIYYGKKGEALGILTGE 162 (554)
Q Consensus 84 ~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~e~g~vvgv~t~~ 162 (554)
T Consensus 80 ---~~~~~-~~~~~~~~f~~~---~~~~~~lg~iv~~~~l~~~L~~~~~~~~~i~~~~~~~v~~~~~~~~~~~v~l~--- 149 (384)
T PRK08849 80 ---RLETW-EHPECRTRFHSD---ELNLDQLGYIVENRLIQLGLWQQFAQYPNLTLLCPEKLKDLEFSAEGNRVTLE--- 149 (384)
T ss_pred ---EEEEE-CCCCCCCCCCHH---HCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCEEEEEEC---
T ss_conf ---25530-177644124853---43863000034379999999999984899199838778898853881499978---
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 32443466578756302677425786066443255421122489988889899889888875165667888089950434
Q gi|254781024|r 163 KGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKIKPQYHRRGLALHSIGWP 242 (554)
Q Consensus 163 ~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei~~~~~~~G~~~h~~g~~ 242 (554)
T Consensus 150 --------------~g~~i~a~llIgADG~~S~vR~~~gi~~~~--~~y~q~~~-----v~~v~~~~~~~~~a~q~f--- 205 (384)
T PRK08849 150 --------------SGAEIEAKWVIGADGANSQVRQLAGIGITA--WDYRQHCM-----LINVETEQPQQDITWQQF--- 205 (384)
T ss_pred --------------CCCEEEEEEEEEEECCCHHHHHHCCCCEEC--CCCCEEEE-----EEEEECCCCCCCCEEEEE---
T ss_conf --------------999998547999207864667733885450--47745899-----999852688777508998---
Q ss_pred CCCCCCCCEEEEECCCCEEEEEEEECCCCCC--CCCCHHHHHHHHHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCC
Q ss_conf 7687664125766479805999983266656--68898899999860800456503882630351340054212487423
Q gi|254781024|r 243 LDMNTSGGGFVYHFDDNLVSIGFVLHLDYRN--PWISAYEELQRFKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLS 320 (554)
Q Consensus 243 ~~~~~~gggwiy~~~d~~~~iG~v~~ld~~~--~~~~~~~~lq~fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~ 320 (554)
T Consensus 206 ~~~--gp~a-~lPl~~~~~s~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~l~~~~~~~~~--~~pl~~-~~a~~~~ 277 (384)
T PRK08849 206 TPS--GPRS-FLPLQGNQGSLVWYDSPKRIKQLSAMSPEQLRSEILRHFP--AELGEFKVLQFG--SFPLTR-RHAQQYV 277 (384)
T ss_pred CCC--CCEE-EEECCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHH--HHCCCEEEEEEE--CCHHHH-HHHHHHC
T ss_conf 499--9727-9862799668999658777987543998999999998730--320756999850--335553-3335523
Q ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHH
Q ss_conf 0887996123233136643522689999999999999987458865-303678998642
Q gi|254781024|r 321 FPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKH-DDPIEIEDSWRQ 378 (554)
Q Consensus 321 ~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~-~~l~~Ye~~~~~ 378 (554)
T Consensus 278 ~~rv~LiGDAAH~~~P~aGQG~N~gi~Da~~L~~~l~~~---~~~~~~~L~~Y~~~R~~ 333 (384)
T PRK08849 278 KNNCVLLGDAAHTINPLAGQGVNLGFKDVDVLLEETEKQ---GALNDAAFARYERRRRP 333 (384)
T ss_pred CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHH
T ss_conf 688899725233469721252404699999999999846---88779999999999989