HHsearch alignment for GI: 254781024 and conserved domain: PRK09078

>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.73  E-value=5.6e-14  Score=116.01  Aligned_cols=177  Identities=19%  Similarity=0.255  Sum_probs=101.9

Q ss_pred             CCHHHCCCCHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCE---EC---HH--------
Q ss_conf             96010242001036477999897689999999998089973999978677898640--2740---33---36--------
Q gi|254781024|r    1 MNSCDILHNKDVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGAI---ID---PI--------   64 (554)
Q Consensus         1 ~~~~~~~~~re~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~v---l~---p~--------   64 (554)
T Consensus         3 ~~~~~~~d~----e~DVlVIGsG~AGL~AAi~a~~~G--~~V~li~K~~~~~s~s~~AqGGi~aa~~~~~~Ds~~~h~~D   76 (598)
T PRK09078          3 MSAYKIIDH----KYDVVVVGAGGAGLRATLGMAEAG--LRTACITKVFPTRSHTVAAQGGISASLGNMGEDDWRWHMYD   76 (598)
T ss_pred             CCCCCCCCC----CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCHHHHCCCCEEECCCCCCCCHHHHHHH
T ss_conf             776665566----379899995699999999998749--90799978899998546541005033378999998999999


Q ss_pred             ------------HHHHHC---C---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEE--EHHHHH
Q ss_conf             ------------788867---8---72641488543224366999977997677365435654467882688--888989
Q gi|254781024|r   65 ------------GIDSLL---P---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIV--SLGQVC  124 (554)
Q Consensus        65 ------------aL~eL~---P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv--~r~~fd  124 (554)
T Consensus        77 Tl~aG~~l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~r~~--dG~~~~~~~GGhs~~~~~~~~~~R--~~~~~d~tG~~i~  152 (598)
T PRK09078         77 TVKGSDWLGDQDAIEYMCREAPAAVYELEHYGVPFSRTE--EGKIYQRPFGGMTTNYGEGPPAQR--TCAAADRTGHAIL  152 (598)
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCEEECCCCCCCEEE--EEEECCCCHHHHH
T ss_conf             998635768899999999989999999998599243289--988612445643201357875047--8850676099999


Q ss_pred             HHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf             9999999874953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r  125 RWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT  197 (554)
Q Consensus       125 ~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la  197 (554)
T Consensus       153 ~~L~~~~~~~~i~~~~~~~~~~li~~~~G~v~Gv~~~~~~---~-------G~~~~i~AkaVILATGG~g~~y  215 (598)
T PRK09078        153 HTLYQQSLKHNAEFFIEYFALDLIMDDEGVCRGVVAWNLD---D-------GTLHRFRAHMVVLATGGYGRAY  215 (598)
T ss_pred             HHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEEEEECC---C-------CCEEEEEECEEEECCCCCCCCC
T ss_conf             9999999863987999889999998279859999999878---9-------9589997076998878777666