HHsearch alignment for GI: 254781024 and conserved domain: PRK09897
>PRK09897 hypothetical protein; Provisional.
Probab=98.10 E-value=2.9e-05 Score=55.45 Aligned_cols=143 Identities=17% Similarity=0.268 Sum_probs=81.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC--CCCCE----ECHHHHHHHCC------CHHHHCCCCCCCE
Q ss_conf 799989768999999999808997399997867789864--02740----33367888678------7264148854322
Q gi|254781024|r 17 VVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHI--LSGAI----IDPIGIDSLLP------RWREDKGHPFHTV 84 (554)
Q Consensus 17 VvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i--~sG~v----l~p~aL~eL~P------d~~e~~g~pl~~~ 84 (554)
T Consensus 4 IAivG~GPtgiYt~~~Ll~~~~~~~I~ifE~~~~aG~GMPYs~e~ns~~mlaNIas~EIPpi~~t~~~WL~~q--~~~-- 79 (535)
T PRK09897 4 IAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQ--EAS-- 79 (535)
T ss_pred EEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHC--CHH--
T ss_conf 7996678624999999864699826999821566778998685445588875031055885135699998738--887--
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHH-------HHHHHHHCC--CEECCCCEEEEEEECCCCCE
Q ss_conf 436699997799767736543565446788268888898999-------999998749--53306822434776277620
Q gi|254781024|r 85 VKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRW-------LKNKAEALG--VEIYCGFTATEIYYGKKGEA 155 (554)
Q Consensus 85 v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~-------L~~~Ae~~G--vei~~g~~v~~i~~~e~g~v 155 (554)
T Consensus 80 -------~L~---~~~id----~~~l~--~rqflPRiLlGeYl~~QF~~Lve~a~~~G~~i~Vh~~~~VtDi~~~~~gv~ 143 (535)
T PRK09897 80 -------HLQ---RYGVK----KETLH--DRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVM 143 (535)
T ss_pred -------HHH---HCCCC----HHHCC--CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCEE
T ss_conf -------898---71998----32264--101004888889999999999999986596699975766676443699559
Q ss_pred EEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCH
Q ss_conf 1454124324434665787563026774257860664432
Q gi|254781024|r 156 LGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGS 195 (554)
Q Consensus 156 vgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~ 195 (554)
T Consensus 144 l~~~~~--~--------------~~~~FD~vVIaTGH~WP 167 (535)
T PRK09897 144 LATNQD--L--------------PSETFDLAVIATGHVWP 167 (535)
T ss_pred EEECCC--C--------------CCCCCEEEEEECCCCCC
T ss_conf 983378--8--------------76432079980798799