HHsearch alignment for GI: 254781024 and conserved domain: PRK12771
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=96.85 E-value=0.024 Score=35.19 Aligned_cols=45 Identities=18% Similarity=0.350 Sum_probs=35.5
Q ss_pred CHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf 81321358600688965997056651566670475730068888625
Q gi|254781024|r 494 GPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEW 540 (554)
Q Consensus 494 ~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w 540 (554)
T Consensus 512 ~~Cv~vCP~~a--i~~~~~g~~~~~d~~~Ci~CG~C~~~CP~gai~M 556 (560)
T PRK12771 512 DNCYGFCPQDA--VIKLGKGRRVETDYDKCTGCHICSDVCPTGYIEM 556 (560)
T ss_pred CCHHHHCCCCC--CCCCCCCCEEEECHHHCCCCCCHHHHCCCCCCCC
T ss_conf 65755284321--0246788637748224667462142289873026