HHsearch alignment for GI: 254781024 and conserved domain: TIGR00136
>TIGR00136 gidA glucose-inhibited division protein A; InterPro: IPR004416 Glucose-inhibited division protein A, GidA appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. The function of these proteins is unknown..
Probab=94.96 E-value=0.028 Score=34.68 Aligned_cols=146 Identities=19% Similarity=0.326 Sum_probs=70.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC-CCCCCCC---CCCEECHHHHHHHCCCHHHHCCCCCCCEEEE--E
Q ss_conf 47799989768999999999808997399997867-7898640---2740333678886787264148854322436--6
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSA-EVGAHIL---SGAIIDPIGIDSLLPRWREDKGHPFHTVVKR--D 88 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~-~pG~~i~---sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~--d 88 (554)
T Consensus 1 ~~~~~~g~gh~g~e~~~~~~~~g--~~~~~~~~~~~~~g~~~cnp~~gg~~~g~~~~e~-----d~lgg~~g~~~d~~~~ 73 (630)
T TIGR00136 1 FDVIVIGGGHAGLEAALAAARLG--AKTLLLTLNLDTLGKCPCNPAIGGPGKGILVKEI-----DALGGLMGKAADKTGL 73 (630)
T ss_pred CEEEEECCCCCCHHHHHHHHHCC--CEEEEEEECHHHHHCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHHH
T ss_conf 90688617620035677765417--5134554041222025566444653234100023-----3420146665534444
Q ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC----CCEECCCCEEEEEEECC----CCCEEEEEE
Q ss_conf 9999779976773654356544678826888889899999999874----95330682243477627----762014541
Q gi|254781024|r 89 LYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEAL----GVEIYCGFTATEIYYGK----KGEALGILT 160 (554)
Q Consensus 89 ~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~----Gvei~~g~~v~~i~~~e----~g~vvgv~t 160 (554)
T Consensus 74 ~~~~ln~~~g--------p-~~~~-~~~~~d~~~y~~~~~~~~~~~~~~pn~~~~~~~~~-~~~~~~~gcg~~~~~g~~~ 142 (630)
T TIGR00136 74 QFRLLNSSKG--------P-AVRA-LRAQIDKLLYRKWAKNTLENQKAHPNLSLLQGEVE-DLLLEDPGCGNDEVKGVVT 142 (630)
T ss_pred HHHHHHCCCC--------C-CCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-HHHHHCCCCCCCCEEEEEE
T ss_conf 4443204566--------4-1000-24566689999999988753114653356676777-7764046888651246653
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 243244346657875630267742578606644
Q gi|254781024|r 161 GEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGAC 193 (554)
Q Consensus 161 ~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~ 193 (554)
T Consensus 143 ~~---------------g~~~~~~~~~~~~g~~ 160 (630)
T TIGR00136 143 KD---------------GAEFRAKAVVLTTGTF 160 (630)
T ss_pred EC---------------CCCCCCCEEEEEECCC
T ss_conf 04---------------6300023256740410