HHsearch alignment for GI: 254781024 and conserved domain: TIGR00275
>TIGR00275 TIGR00275 conserved hypothetical protein TIGR00275; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases..
Probab=92.48 E-value=0.13 Score=30.00 Aligned_cols=161 Identities=19% Similarity=0.255 Sum_probs=87.1
Q ss_pred EEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCE--------ECHHHHHHHCCCHHHHCCCCCCCEEEEE
Q ss_conf 999897689999999998089973999978677898640-2740--------3336788867872641488543224366
Q gi|254781024|r 18 VIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL-SGAI--------IDPIGIDSLLPRWREDKGHPFHTVVKRD 88 (554)
Q Consensus 18 vIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~-sG~v--------l~p~aL~eL~Pd~~e~~g~pl~~~v~~d 88 (554)
T Consensus 1 ~~~g~g~~g~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~ggg~c~~~~~~~~p~~~~~~~p~gg~~~~~~~~~~~~~~ 80 (411)
T TIGR00275 1 IVVGGGAAGLFCAANCARLGPEGRVLLLDNGKKPGRKVLLSGGGRCNFTNLCVDPGAYLSQNPRGGHFLKGALARFTPWD 80 (411)
T ss_pred CEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEECCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCHH
T ss_conf 91236301356666654226554068862574100000112785100000100504665237765225665665313213
Q ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCC
Q ss_conf 99997799767736543565446788268888898999999998749533068224347762776201454124324434
Q gi|254781024|r 89 LYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYD 168 (554)
Q Consensus 89 ~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~ 168 (554)
T Consensus 81 ~~~~~-~~~g~~~~~~~~g~~~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 150 (411)
T TIGR00275 81 FIALV-GAEGVALHEKALGQLFP----CDDGAGQIVDCLLSECDKGGVELRLRSEVLGLEKLENGEKVRFTLQLN----- 150 (411)
T ss_pred HHHHH-HHCCCEEHHHHCCCEEC----CCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEEECC-----
T ss_conf 55555-31142000110253103----566446899998875532262132100233444302564044433003-----
Q ss_pred CCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 66578756302677425786066443255
Q gi|254781024|r 169 GTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 169 ~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 151 ---------~~~~~~~~~~~~~g~~~~~~ 170 (411)
T TIGR00275 151 ---------GTVWGCEGLIIATGGLSLPG 170 (411)
T ss_pred ---------CCEEECCCCEEECCCCCCCC
T ss_conf ---------10000023123136520012