HHsearch alignment for GI: 254781024 and conserved domain: TIGR01316

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=98.79  E-value=4.4e-08  Score=75.09  Aligned_cols=183  Identities=20%  Similarity=0.253  Sum_probs=91.8

Q ss_pred             HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC--------CEE---------------------
Q ss_conf             103647799989768999999999808997399997867789864027--------403---------------------
Q gi|254781024|r   11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSG--------AII---------------------   61 (554)
Q Consensus        11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG--------~vl---------------------   61 (554)
T Consensus       139 p~t~~kVAViGaGPAGL~cA~elAk~G--h~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvG  216 (462)
T TIGR01316       139 PSTKKKVAVIGAGPAGLACASELAKKG--HEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVG  216 (462)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHCC--CEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEC
T ss_conf             888877999846821468899997479--869999714899856753688854875788988887632663799443750


Q ss_pred             CHHHHHHHCCCHHHHC-----CCCCCCE--EEEE---EEE----EECC---CCCEECCCCCCCCCCCC------------
Q ss_conf             3367888678726414-----8854322--4366---999----9779---97677365435654467------------
Q gi|254781024|r   62 DPIGIDSLLPRWREDK-----GHPFHTV--VKRD---LYW----FLNA---QRSIQIPHFCLPDFMDN------------  112 (554)
Q Consensus        62 ~p~aL~eL~Pd~~e~~-----g~pl~~~--v~~d---~~~----~l~~---~~~~~~p~~~~p~~~~~------------  112 (554)
T Consensus       217 kt~TL~eL~~~YGfDAVFIgtGAG~pkl~NipG~~L~gvysA~dfLtR~nLmKAyefp~~dtPv~~gK~vvviGgGntAv  296 (462)
T TIGR01316       217 KTVTLEELLEKYGFDAVFIGTGAGLPKLLNIPGEELKGVYSANDFLTRVNLMKAYEFPKKDTPVEVGKKVVVIGGGNTAV  296 (462)
T ss_pred             CCHHHHHHHHHCCCCEEEEEECCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCHHHH
T ss_conf             51128888875197079995068987001678434340022346887777765423667887565447689987853678


Q ss_pred             -----------C-CCEEEEHHHHH----HHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCC--CCCC---CCC
Q ss_conf             -----------8-82688888989----9999999874953306822434776277620145412432--4434---665
Q gi|254781024|r  113 -----------K-EHYIVSLGQVC----RWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKG--KNYD---GTQ  171 (554)
Q Consensus       113 -----------~-g~yiv~r~~fd----~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G--~~k~---~~~  171 (554)
T Consensus       297 D~artAlRLGaEqvh~~YRrtRedmtAr~EEi~ha~eEGVkfhfl~Qpve~iGdE~G~V~avkf~~~~~~E~~dsg~~r~  376 (462)
T TIGR01316       297 DAARTALRLGAEQVHVVYRRTREDMTAREEEIKHAEEEGVKFHFLLQPVEVIGDEEGEVKAVKFEKTELLEERDSGEKRK  376 (462)
T ss_pred             HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEE
T ss_conf             77766645284236998854777513669999988538928998742168986576518999988537688114578124


Q ss_pred             CCCCCCEEEEEEEEEEEECCCCCH
Q ss_conf             787563026774257860664432
Q gi|254781024|r  172 GKHYIAPMLLLSKYMLVGEGACGS  195 (554)
Q Consensus       172 ~~~~~~g~~i~Ak~vI~AdG~~s~  195 (554)
T Consensus       377 ~p~~~~e~~leaD~VI~AiG~~~N  400 (462)
T TIGR01316       377 VPVTDEEVKLEADAVIVAIGQEAN  400 (462)
T ss_pred             EECCCCCEEEEECEEEEEECCCCC
T ss_conf             304995178862659997458988