HHsearch alignment for GI: 254781024 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=98.79 E-value=4.4e-08 Score=75.09 Aligned_cols=183 Identities=20% Similarity=0.253 Sum_probs=91.8
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC--------CEE---------------------
Q ss_conf 103647799989768999999999808997399997867789864027--------403---------------------
Q gi|254781024|r 11 DVFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSG--------AII--------------------- 61 (554)
Q Consensus 11 e~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG--------~vl--------------------- 61 (554)
T Consensus 139 p~t~~kVAViGaGPAGL~cA~elAk~G--h~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvG 216 (462)
T TIGR01316 139 PSTKKKVAVIGAGPAGLACASELAKKG--HEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVG 216 (462)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCC--CEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEC
T ss_conf 888877999846821468899997479--869999714899856753688854875788988887632663799443750
Q ss_pred CHHHHHHHCCCHHHHC-----CCCCCCE--EEEE---EEE----EECC---CCCEECCCCCCCCCCCC------------
Q ss_conf 3367888678726414-----8854322--4366---999----9779---97677365435654467------------
Q gi|254781024|r 62 DPIGIDSLLPRWREDK-----GHPFHTV--VKRD---LYW----FLNA---QRSIQIPHFCLPDFMDN------------ 112 (554)
Q Consensus 62 ~p~aL~eL~Pd~~e~~-----g~pl~~~--v~~d---~~~----~l~~---~~~~~~p~~~~p~~~~~------------ 112 (554)
T Consensus 217 kt~TL~eL~~~YGfDAVFIgtGAG~pkl~NipG~~L~gvysA~dfLtR~nLmKAyefp~~dtPv~~gK~vvviGgGntAv 296 (462)
T TIGR01316 217 KTVTLEELLEKYGFDAVFIGTGAGLPKLLNIPGEELKGVYSANDFLTRVNLMKAYEFPKKDTPVEVGKKVVVIGGGNTAV 296 (462)
T ss_pred CCHHHHHHHHHCCCCEEEEEECCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCHHHH
T ss_conf 51128888875197079995068987001678434340022346887777765423667887565447689987853678
Q ss_pred -----------C-CCEEEEHHHHH----HHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCC--CCCC---CCC
Q ss_conf -----------8-82688888989----9999999874953306822434776277620145412432--4434---665
Q gi|254781024|r 113 -----------K-EHYIVSLGQVC----RWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKG--KNYD---GTQ 171 (554)
Q Consensus 113 -----------~-g~yiv~r~~fd----~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G--~~k~---~~~ 171 (554)
T Consensus 297 D~artAlRLGaEqvh~~YRrtRedmtAr~EEi~ha~eEGVkfhfl~Qpve~iGdE~G~V~avkf~~~~~~E~~dsg~~r~ 376 (462)
T TIGR01316 297 DAARTALRLGAEQVHVVYRRTREDMTAREEEIKHAEEEGVKFHFLLQPVEVIGDEEGEVKAVKFEKTELLEERDSGEKRK 376 (462)
T ss_pred HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEE
T ss_conf 77766645284236998854777513669999988538928998742168986576518999988537688114578124
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCH
Q ss_conf 787563026774257860664432
Q gi|254781024|r 172 GKHYIAPMLLLSKYMLVGEGACGS 195 (554)
Q Consensus 172 ~~~~~~g~~i~Ak~vI~AdG~~s~ 195 (554)
T Consensus 377 ~p~~~~e~~leaD~VI~AiG~~~N 400 (462)
T TIGR01316 377 VPVTDEEVKLEADAVIVAIGQEAN 400 (462)
T ss_pred EECCCCCEEEEECEEEEEECCCCC
T ss_conf 304995178862659997458988