HHsearch alignment for GI: 254781024 and conserved domain: TIGR01989
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6; InterPro: IPR000689 Ubiquinone (Q) functions as an electron carrier in the respiratory chain in mitochondria. Q biosynthesis involves a series of enzymatic steps, which are catalysed by the enzymes COQ1-COQ8 in Saccharomyces cerevisiae. COQ6, or ubiquinone biosynthesis monooxygenase, is a flavin-dependent enzyme localised to the matrix side of the inner mitochondrial membrane that is required for one or more steps in Q biosynthesis , .; GO: 0004497 monooxygenase activity.
Probab=99.69 E-value=4.5e-15 Score=123.68 Aligned_cols=348 Identities=15% Similarity=0.146 Sum_probs=188.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCCEEEEEECCCCCCCC-----CCCC------CEECHHHHHHH--CCCHHHHCCC
Q ss_conf 4779998976899999999980--899739999786778986-----4027------40333678886--7872641488
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQI--NPHLSVVILEKSAEVGAH-----ILSG------AIIDPIGIDSL--LPRWREDKGH 79 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~--g~~l~VlvlEK~~~pG~~-----i~sG------~vl~p~aL~eL--~Pd~~e~~g~ 79 (554)
T Consensus 1 ~DvvIvGGG~VG~alAaaL~~~~~~~dlkv~Lld~~d~p~l~s~~y~~~~~~y~NRvssitp~si~~f~~~GAWd~i~~~ 80 (481)
T TIGR01989 1 FDVVIVGGGLVGLALAAALGNNPLLKDLKVLLLDAVDAPKLKSRKYEKPDGPYSNRVSSITPASIEFFKKIGAWDHIESD 80 (481)
T ss_pred CCEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHH
T ss_conf 92898888578999999973187320230678652348234211015788887763585375079998534835898851
Q ss_pred CCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCC---CEECCCCEEEEEEECCC----
Q ss_conf 54322436699997799767736543565446788268888898999999998749---53306822434776277----
Q gi|254781024|r 80 PFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALG---VEIYCGFTATEIYYGKK---- 152 (554)
Q Consensus 80 pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~G---vei~~g~~v~~i~~~e~---- 152 (554)
T Consensus 81 R~-~~f~~~~V~D~~s~a~i~f~~~----~~~e~~aciiEN~~i~~sL~~~l~~~~~~~~~~~~~~~~~~~~ip~~srqa 155 (481)
T TIGR01989 81 RI-KPFKRMQVWDGCSKALIEFDRD----NVKEDMACIIENDVIQASLYNRLKEYKSDNVKVLYKAKLISVTIPKKSRQA 155 (481)
T ss_pred HH-HHHCCEEEEEECCCEEEEECCC----CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHCEEEECCCCCCCCC
T ss_conf 14-2017189887247403444236----888643011356899999999998725882331001010231155101457
Q ss_pred CCEEEEEECCC--CCCCCCCCCCCCCCE---------------EEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 62014541243--244346657875630---------------2677425786066443255421122489988889899
Q gi|254781024|r 153 GEALGILTGEK--GKNYDGTQGKHYIAP---------------MLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKF 215 (554)
Q Consensus 153 g~vvgv~t~~~--G~~k~~~~~~~~~~g---------------~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~ 215 (554)
T Consensus 156 PtreaissG~p~~~~~~~~~~~i~L~dGdvietsllvrinflk~~l~~~LliGADG~NS~VR~~~~i~~-~gwNY~--~- 231 (481)
T TIGR01989 156 PTREAISSGSPFEENDNSNWVHITLSDGDVIETSLLVRINFLKETLKTKLLIGADGVNSKVRKAANIDV-TGWNYD--Q- 231 (481)
T ss_pred CCCHHHCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEECCCC-CCCCCC--C-
T ss_conf 530121168887655667642577068866314555565554320003357743278772233623675-453357--6-
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCC------------------------C
Q ss_conf 8898888751656678880899504347687664125766479805999983266------------------------6
Q gi|254781024|r 216 GLGIKELWKIKPQYHRRGLALHSIGWPLDMNTSGGGFVYHFDDNLVSIGFVLHLD------------------------Y 271 (554)
Q Consensus 216 ~~gvke~~ei~~~~~~~G~~~h~~g~~~~~~~~gggwiy~~~d~~~~iG~v~~ld------------------------~ 271 (554)
T Consensus 232 -~avVatl~l~~~~~~n~~AWQR---FLP~GP--iAlL-Pl~D~~s~lVWSts~e~a~~L~~Lp~e~FV~~lN~Af~l~~ 304 (481)
T TIGR01989 232 -SAVVATLKLEEDATENEVAWQR---FLPTGP--IALL-PLSDNLSTLVWSTSPEEAKRLKSLPPEEFVDALNAAFRLDY 304 (481)
T ss_pred -CEEEEEEEECCCCCCCCEEEEC---CCCCCC--EEEC-CCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf -4268888505678888735413---378766--2445-76653365412167799998425883578999998741788
Q ss_pred CC-CCC---------CHHHHHHHHHHC-CCHHHHHCCCCEEC--C----------CCEECCCCCCCCCCCCCCCCEEEEC
Q ss_conf 56-688---------988999998608-00456503882630--3----------5134005421248742308879961
Q gi|254781024|r 272 RN-PWI---------SAYEELQRFKTH-PDIRIIFTEGERLE--Y----------GARVISEGGWQSVPKLSFPGGSLIG 328 (554)
Q Consensus 272 ~~-~~~---------~~~~~lq~fk~h-p~i~~~l~gg~~~~--y----------ga~~ip~gg~~s~pk~~~~g~lLvG 328 (554)
T Consensus 305 ~d~~~~~~~d~~Gsm~~~~L~~~~~~~~~~~yatL~~~~~~~~~~PP~v~~v~~ksRa~FPL~L~H-a~~Yv~~R~ALvG 383 (481)
T TIGR01989 305 SDLNYLYLVDEAGSMDVEKLNEDIGFRTEEIYATLKVGRKSEVQVPPRVIGVVDKSRAAFPLGLGH-ADEYVTERVALVG 383 (481)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCCC-CHHHHCCCCCEEC
T ss_conf 888731100022562089999741353014201110353134016885899823750368742122-0777528962622
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CC--CCHHHHHHHHHHH
Q ss_conf 232331366435226899999999999999874588-65--3036789986420
Q gi|254781024|r 329 CAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGK-KH--DDPIEIEDSWRQT 379 (554)
Q Consensus 329 DAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~-~~--~~l~~Ye~~~~~s 379 (554)
T Consensus 384 DAAH~vHPLAGQGvNlG~~Dv~~L~~~L~~a~~~G~DiGs~~~L~~Y~~~r~~~ 437 (481)
T TIGR01989 384 DAAHRVHPLAGQGVNLGFSDVESLVKALSKAVKEGADIGSVSSLKPYERERQAK 437 (481)
T ss_pred CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 301067873345101117899999999999986055524145205889878662