HHsearch alignment for GI: 254781024 and conserved domain: TIGR02733
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD; InterPro: IPR014104 Members of this family are encoded by slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. (strain PCC 6803), and close homologues (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyses the first step that is committed to myxoxanthophyll..
Probab=98.18 E-value=2.3e-06 Score=63.18 Aligned_cols=71 Identities=11% Similarity=-0.009 Sum_probs=46.2
Q ss_pred EEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 88889899999999874953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 118 VSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 118 v~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 229 GSMQ~LSD~L~~al~~~GG~l~~gqrV~~I~~~~~~~~-~~~v~~~r----------~~~~~~~~A~d~V~~lPpq~LL- 296 (499)
T TIGR02733 229 GSMQVLSDRLVEALKRDGGRLLTGQRVTAIETKGGRAG-WVVVVDSR----------KQEDEQVKADDVVANLPPQSLL- 296 (499)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEE-EEEEEECC----------CHHHHHHHHHCCEEECCHHHHH-
T ss_conf 20235789999999867987986002323443168415-68874164----------1146774420312007741168-
Q ss_pred HHH
Q ss_conf 421
Q gi|254781024|r 198 RQL 200 (554)
Q Consensus 198 k~l 200 (554)
T Consensus 297 ~l~ 299 (499)
T TIGR02733 297 ELL 299 (499)
T ss_pred HHC
T ss_conf 766